##maf version=1 scoring=roast.v3.3 a score=775762.000000 s hg38.chr3_KI270779v1_alt 0 1491 + 205312 CATTATAATA---AAAACCTTTAAATGCTCTGAGTGCCCAGCGTCAGCATGGTGATAACATACATACGAGGGAATATTGTGCAGCTGCAGTTAGTTCTTATTACATTTCACAGGCATCTTAAATGCTTTGTGAACACCGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTG-AAATAATAAAAAAAATGGACATATAATTTTAAAAATATTGAGTGACAGAAAAAAATGAAAAAATGTTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCGTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGGCTTGCCTGGCCCGTGGGTGGGAATTGTGGTGCTCCAAGTGCCTTCAGCTGCTGCTGGGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCCATCCTCACCACCCCATGGCCTCCATGGAGCCCCAC-GGCAGCCTCAGGAAGGAGGGCAGTATCGTCAGAACACAGTCCTCATGGACCCCCC-AAGAGACCCTTGGGCAGAATGCCCCATCCCACCCAGGTCCAGCTTCACTCAGCACGTAAACAGGAACACGGCTGCAGGCAGGCTCCACGCACCCCGTCCCCAGGGAAGCCGCAGCCCTCGTCCCACGTATCCCGGGCAGGCATCTGTAACTGAGGGCTGCGTGGTCGGGTGAGCAGCGAGGCACATGCTGGCTGGGCGGGGAGGGGCGGCCCTGAGTGGTCGTCTTGCTCAGTGCTAGAGGGGCTCTGAGCCGAAGGTCTGAGGGtcctggagctgccatggcagatccccacagtctcggcagctcaaaacaacagggactcattctctccccgctcagcagggaggggtctgaaatc---gagtccatgggccgtgctccctccagaggctccaggggaggaccctgccacctccaccagcttctgtggctccaggcgtccctgggccgcggccacaatgctgcacctctgcctcggtctccaggcgacctcctcctctgtctgcgtctaacctccctctgcctctgtgtaaggacacttgccgtgcatgtagggccaacgagttaatccagaatgacctccttatctcaagatctttaacttaaacacagccacaaagacctgcctcctatttgaagagaggttctctgcacagttccagggtcaggaggtgaacaccAGGTGGCCCAGCCTCAGCCACCCCAGTGATGATGTGTGAGGTTTCAGAACAGCTGTGCTGCCCTGTTAGGAGCTATACACGCAGAAAGGCAACTCCGCCAGCGTCAGGGGTGCCGGATGCATGC-AGGATCAGAAGGCGTCGGATTTCCCAGGGAAGCTGGGGAGCAAGGATCCTGCACCAAGGGAGGCAGGAGGCCGGAGA----------------------CCAGCCCAGGCCCAGTCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGAGCCTCC-GTGACCCAGCCCTGGAGGGTCAGCACTGTCCCTCAAACGGATTCT s panTro5.chr3 535498 1491 - 202621043 cattataata---aaaacctgtaaatgctctgagtgcccagcgtcagcatggtgataacatacatacgagggaatattgtgcagcTGCAGTTAGTTCTTATTACATTTCACAGGCATCTTAAATGCTTTGTGAACACTGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTG-AAATAATAAAAAAA-TGGACATATAATTTAAAAAATATTCAGTGACAGAAAAAAATGAAAAAATGTTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCGTGTCTCCTTGCTGCCTTCTTTGGGGACGGTTCTGGCCTTGCCTGGCCCGTGGGTGGGAATTGTGGTGCTCCAAGTGCCTTCAGCTGCTGCTGGGGTCCCGGGAGCCCAGCCTAGGTGTTCTTCCGTCCTCACCACCCCATGGCCTCCATGGAGCCCCAT-GGCAGCCTCAGGAAGGAGGGCAGTATCGTCAGAACACAGTCCTCATGGACCCCCCCAAGAGACCCTTGGGCAGAATGCCCCGTCCCACCCAGGTCCAGCTTCACTCAGCACCTAAACAGGAACACGGCTGCAGGCAGGCTCCACGCACCCCGTCCCCAGGGAAGCCGCAGCCCCCGTCCCACGTATCCCGGGCAGGCATCTGTAACTGAGGGCCGCATGGTCGGGTGAGCAGCGAGGCACATGCTGGCTGGGCGGGGAGGGGCGGTCCTGAGTGGTCGTCTTGCTCAGTGCTGGAGGGGCTCTGAGCCGAAGGTCTGAGGGtcctggagctgccatggcagatccccacagtctgggcagctcaaaacaacagggactcattctctccccgctcagcagggaggggtctgaaatc---gagtccacgggccgtgctccctccagaggctccaggggaggaccctgccacctccaccagcttctgtggctccaggcgtccctgggccgcggccgcactgctgcacctctgcctcggtcgccaggcggcctcctcctctgcctgcgtctaacctccctctgcctctgtgtaaggacacttgccgtgcatgtagggccaacgggttcatccagaatgacctccttatctcaagatctttaacttaaacacagccacaaagacctgccccctatttgaagagaggttctctgcacagttgcagggtcaggaggtgaacACCAGGTGGCCCAGCCTCAGCCACCCCAGTGAGGACGTGTGAGGTTTCAGAACGGCTGTGCTGCCCTGTTAGGAGCTATACACGCAGAAAGGCAACTCCGCCAGCGTCAGGGGTGCGGGATGCATAC-AGGATCAGAAGGCGTCGGATTTCCCAGGGAAGCTGGGGAGCAAGGATCCTGCACCAAGGGAGGCAGGAGGCCGGAGA----------------------CCAGCCCAGGCCCAGTCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCGCTGGAGCCTCC-GTGACCCAGCCCTGGAGGGTCAGCAGTGTCCCTCAAACGGATTCT i panTro5.chr3 N 0 C 0 s gorGor5.CYUI01015777v1 30068 1486 - 837792 cattataata---aaaacctgtaaatgctctgagtgtccagcgtcagcatggtgataacatacatacgagggaatattgtgcagcTGCAGTTAGTTCTTATTACATTTCACAGGCATCTTAAATGCTTTGTGAACACCAGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTG-AAATAATAAAAAAA--GGACATAAAATTTTAAAAATATTGAGTGACAGAAGAAAATGAAAAAATGTTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCGTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGCGTTGCCTGGCCCGTGGGTGGGAATTGTGGTGCTCCAAGTGCCTTCAGCTGCTGCTGGGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCCGTCCTCACCACCCCATGGCCTCCATGGAGCCCCAC-GGCA-CCTCAGGAAGGAGGGCAGTATCGTCAGAACAGAGTCCTCATGGACCCCC--AAGAGACCCTTGGGCCGAATGCCCCGTCTCACCCAGGTCCAGCTTCACTCAGCACCTAAACAGGAACACGGCTGCAGGCAGGCTCCACGCACCCCGTCCCCAGGGAAGCCGCAGCCCCCGTCCCACGTATCCCGGGCAGGCATCTGTAACTGAGGGCTGCGGGGTCGGGTGAGCAGCGAGGCACATGCTGGCTGGGCGAGGAGGGGCAGCCCTGAGTGGTCGTCTTGCTCAGTGCTGGAGGGGCTCTGAGCCAAAGGTCTGAGGGtcctggagctgccacggcagat-cccacagtctgcgcagctcaaaacaacagggactcattctctccccgctcagcagggaggggtctgaaatc---gagtccacgggccgtgctccctccagaggctccaggggaggaccctgccacctctgccagcttctgtggctccaggcgtccctgggccgtggccgcattgctgcacctctgcctcggtctccaggcggcctcctcctctgtctgcgtctaacctccctctgcctctgtgtaaggacacttgccatgcatgtagggccaacgagttaatccagaatgacccccttatctcaagatctttaacttaaacacagccacaaagacctgcctcctatttgaagagaggttctctgcacagttccagggtcaggaggtgaacACCAGGTGGCCCAGCCTCAGCCACCCCAGTGAGGACGTGTGAGGTTTCAGAACGGCTGTGCTGCCCTGTTAGGAGCTATACACGCAGAAAGGCAACTCCGCCAGCGTCAGGGGTGCTGGATGCATGC-AGGATCAGAAGGCGTCGGATTTCCCAGGGAAGCTGGGGAGCAAGGATCCTGCACCAAGGGAGGCAGGAGGCCGGAGA----------------------CCAGCCCAGGCCCAGTCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGAGCCTCC-GGGACCCAGCCCTGGAGGGTCAGCACTGTCCCTCAAACGGATTCT i gorGor5.CYUI01015777v1 N 0 C 0 s nomLeu3.chr11 120754873 1502 + 123690457 cattataataaagaaaacctgtaaatactctgagtgcccagcatcagcatggtgataatgtacatatgagggaatattgtgcagcTTCAGTTAGTTCTTATTACATTTCATAGGCATCTTAAATGCTTTGTGAACACCGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTGCAAGTAATTAAAAAA-TGGACATATAATTTTAAAAATATTGAGTGACAGAAAAAAAGGAAAAAATGTTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCCTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGCCTTGCCTGGCCCGTGGGTGGGAATTATGGTGCTTCAAGTGCCTTCAGCTGCTGCT-GGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCCGTCCTCACCACCCCATGGCCTCCATGGAGCCCCACGGGCAGCCTCAGGAAGGAGGGCAGTATCGTCAGAACAGAGTCCTCGTGGACCCC---AAGAAACCCTTGGACAGAATGCCCCATCCCACCCAGGTCCAGCTTCACTCAGCACCTAAACAGGAGCACGGCTGCAGGCAGGCTCCACGCACCCCATCCCCAGGGAAGCCGCAGCCCCTGTCCCATGTATCCCGGGCAGGCATCTGTAACTGAGGGCAGCGTGGTCGGGTGAGCAGCGAGGTACACGCTGGCTGGGCGGGGAGGGGTGGCCCTGAGCAGTCATCTTGCTCAGTGCTGGAGGGGTTCCGAGCCGAAGGTCCGAGGGtcctggaactgccatggcagatccccacagcctgggcagctcgaaacagcaggggctcattctctccccactcagcagggaggggtctgaaatcaaggagtccacgggctgtgctccctccagaggcttcaggggaggaccctcccacctccgccagcttctgtggctccaggcgtccctgggccgcagccgcattgctgcacctctg-----------------ccttctgctctgtctgcgtctaacctccctctgcctctgtgtaaggacacttgccatgcatttagggccaacgggttaatccagaatgacctccttatctcaagatctttaacttaatcacagccacaaagacctgcctcctatttgaagagaggttctgtgcatggttccagggtcaggaggtgaacacctggtggcccaGCCTCAGCCGCCCCAGTGAGGACGTGCGAGGTTTCAGAACGGCTGTGCTGCCCTGTTAGGAGTTATACACGCAGAAAGGCAACTCCGCCAGCATCAGGGGTGCTGGATGCGTGCGGGGATCAGATGGCGTTGGATTTCCCAGGGAAGCTGGGGAGCAAGGGTCCTGCATCAAGGGAGGCAGGAGGCCAGAGAccagcccaggcccagcccaggcccagcccaggcccagcccaggAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGAGCCTCCAGTGACCCAGCCCTGGAGGGTCAGCACTGTCCCTCAAACGGATTCC i nomLeu3.chr11 N 0 C 0 a score=7821.000000 s hg38.chr3_KI270779v1_alt 1491 16 + 205312 TCACACACAGGTCTCT s panTro5.chr3 536989 16 - 202621043 TCACACACGGGTCTCT i panTro5.chr3 C 0 I 421 s gorGor5.CYUI01015777v1 31554 16 - 837792 TCACACACAGGTCTCT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2933283 16 - 123690457 TCGCACACAGGTCTCG i nomLeu3.chr11 n 0 C 0 a score=11808.000000 s hg38.chr3_KI270779v1_alt 1507 22 + 205312 CTGTCTGTGGGGGCTGCAGGGC s panTro5.chr3 537426 22 - 202621043 CTGTCTGTGGGGGCTGCAGGGC i panTro5.chr3 I 421 C 0 s gorGor5.CYUI01015777v1 31570 22 - 837792 CTGTCTGTGGGGGCTGCAGGGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 2933299 22 - 123690457 CTGTCTGTGGAGGCTGCAGGCC i nomLeu3.chr11 C 0 n 0 a score=5077.000000 s hg38.chr3_KI270779v1_alt 1529 19 + 205312 CAGTGCCTGAGGAGCCCGG s panTro5.chr3 537448 19 - 202621043 CGGTGCCTGGGGAGCCCGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 31592 19 - 837792 CAGTGCCTGAGGAGCCCGG i gorGor5.CYUI01015777v1 C 0 C 0 e nomLeu3.chr11 2933321 0 - 123690457 I a score=435019.000000 s hg38.chr3_KI270779v1_alt 1548 860 + 205312 ACTTCACACAGGGGTCTCTCTGTCTGTGGGGGCTG------------------------------------------------------------CAGAGCCGGTGCCTGGGGAGCCCGGACTGCCGGAAACCTTTGCGGTGGGAGGCTGCAGATGGGACTTCTTGGCCTGTGTTTATGTGGAGCCCAGGCTGCGGGCACCACAGCCAGGCACAGGTCAGGGGTAAGTTGTGGGTGATGTAAGGACTAGAAGCGTAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGCGGTGGGAAAGACATGGGCTCCGGCGGCTGCTGGGGATGGCCTGGCTTGCACCTGCTGGGTCCCCCCCTGGCCACCAGCCTCACCCAAGGGCAGTTGGTGACTGCCTGCCTCACTCCTGCCAACCCTCAGGGGCCTAGGAGTCCTGCGTGGTGGGTCTAGGAACCATGCTGGAGGACAGGCCTGTGCCAGGGCCACCAGGATGTCTATGGCAGGAGCCGGTGCTGGCGAACCCCACACCTTGAGCCCCAGAGCCAGGATCCTCAGCCCAGGAAAGGGACCAGAGGCGGGAAAACCACACGGCAAAGG----CTGTCCCGTGAGGTCACGGCTCCGTCACCGCTGCCCACACACGGAAGGCAGCCGCGGCTGGGTGAAGCCATCTTCACAGACATGCCGTCCTTGAGGCTCTCACACATGCACACAGACGCTCCGTCCTCTCC--CACCCGCCCC-CCCGCCACCCCGGGCAGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCCGAGGGTTGCCGTCAGTCCGTG-TGCCCAGGCATCGGGGCCTGAAGCCTCCACAGACAGCGAGACCTGTGTACGAAGCAGACTCTGTCCTAGGGACAGTGCTGACCCTACAAGGCTGGGTCACTGGAGGCTC s panTro5.chr3 537467 866 - 202621043 ACTTCACACACGGGTCTCCCTGTCTGTGGGGGCTG------------------------------------------------------------CAGGGCCGGTGCCTGGGAAGCCCGGACTGCCGGAAACCTTTGGGGTGGGAGGCTGCAGATGGGACTTCCTGGCCTGTGCTTATGTGGAGCCCAGGCTGCGGGCCCCATAGCCAGGCATAGGTTAGGGGTGAGTTATGGGTGATGTAAGGACTAGAAGCGTAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGCGGTGGGAAAGACATGGGCTCCGGCGGCTGCTGGGGATGGCCTGGCTTGCACCTGCTGGGTCCCCCCCCAGCCACCAGCCTCACCCAAGGGCAGTTGGTGACTGCCTGCCTCACTCCTGCCAACCCTCAGGGGCCTAGGGGTCCTGCGTGGGGGGTCTAGGAACCATGCTGGAGGACGGGCCTGTGCCAGGGCCACCAGGATGTCTATGGCAGGAGCCGGTGCTGGCGAACCCCACACCTTGAGCCCCAGAGCCAGGATCCTCAGCCCAGGAAAGGGATCAGAGGCAGGAAAACCACACGGCAAAGGCTGTCTGTCCCGTGAGGTCACGGCTCCGTCACCGCTGCCCACACACGGAAGGCAGCCGCGGCTGGGAGAAGCCATCTTCACAGACATGCCGTCCTTGAGGCTCTCACACATGCACACAGACGCTCCGTCCTCTCCCACACCCGCCCC-CCGGCCACCCCGGGCAGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCCGAGGGTTGCCGTCAGTCCGTG-TGCCCAGGCATCGGGGCCTGCAGCCTCCACAGACAGCGAGACCTGTGTGCGAAGCAGACTCTGTCCTAGGGACAGTGCTGACCCTCCAAGGCTGGGTCACTGGAGGCTC i panTro5.chr3 C 0 I 133 s gorGor5.CYUI01015777v1 31611 916 - 837792 ACTTCACACACGGGTCTCCCTGTCTGTGGGGGCTGCAGGGCCAGTGCCTGAGGAGCCCGGACTTCACACACGGGTCTCTCTGTCTGTGGGGGCTACAGGGCCGGTGCCTGGGGAGCCCGGACTGCCGGAAACCTTTGGGGTGGGAGGCTCCAGATGGGACTTCCTGGCCTGTGTTTATGTGGAGCCCAGGCTGCGGGCACCACAGCCAGGCATAGGTTAGGGGTGAGTTGTGG-----GTAAGGACTAGAAGCATAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGTGGTGGGAAAGACATGGGCTCCGGCGGCTGCTGGGGGTGGCCTGGCTTGCACCTGCTGGGTCCCCCCC-GGCCACCAGCCTCACCCAAGGGCAGTTGGTGACTGCCTGCCTCACTCCTGCCGACCCTCAGGGGCCTAGGGGTCCTGCGTGG-GGGTCTAGGAACCATGCTGGAGGACGCGCCTGTGCCAGGGCCACCAGGATGTCTATGGCAGGAGCTGGTGCTGGCGAACCCCACACCCTGAGCCCCAGAGCCAGGCTCCTCAGCCCAGGAAAGGGATCAGAGGCGGGAAAACCACACGGCAAAGG----CTGTCCCGTGCGGTCACGGCTCCGTCACCGCTGCTCACACACGGAAGGCAGCTGCGGCTGGGAGAAGCCATCTTCACAGACATGCCATCCTTGAGGCTCTCACACATGCACACAGACGCTCCATCCTCTCCCACCCCCACCCCACCCGCCACCCCGGGCAGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCCGAGGGTTGCCGTCAGTCCGTG-TGCCCAGGCATCGGGGCCTGCAGCCTCCACAGACAGCGAGACCTGTGTGCGAAGCAGACTCTGTCCTAGGGACAGTGCTGACCCTCCAAGGCTGGGTCACTGGAGGCTC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120756375 856 + 123690457 ACTTCACACACAGGTCTCCCTGTCTGTGCGTGCTG------------------------------------------------------------TAGGGCTGGTGCCTGGGGAGCCGGGACTGCCAGAAACCTTCAGGGTGGGAGGCTCCAGATGGGACTTCCTGGCCTGTGTTTATGTGGAGCCCAGGCTGCAGGTGCCACAGCCAGGCACAGGTTAGGGGTGAGTTGTGGGTGATGTAGGGACTAGAAGCACAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGTGGTGGGAAAGACACAGGCTCCGGTGGCTGCTGAGGGTGGCCTGGCCTGCACCTGCTGGGTCCACCCCTGGCCACCAGGCTCACCCAAGGGCAGTTGGTGACGGCCTGCCTCACTCCTGCTGACCCTCAGGGGCCTAGGGGTCCCGCGTGAGGGGTCTAGGAACCATGCTGGAGGACGTGCCTGTGCCAGGGCCACCAGGATGTCTATGGCAGGAGCCGGTGCTGGCGAACCCCACACCTTGAGCCCCAGAGCCAGGCTCCTCAGCCTAAG-AAGGGATCAGAGGCGGGAAAACCACATGGCAAAGG----CTGTCCCGTGCAGTCCTGGCTCCACCACCACTGCCCACACACGGAAGGC-GCCGCGGCTGGGAGAAGCCATCTTCACAGACATGCCATCCTTGTGGCTCTCACGCATGTGCACAGACGCTCCGTCCTCTCCCACCCCCAACCC------CACCCCGGGAGGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCTGAGGGTTGCCTTCAGTCCGTGCTGCCCAGGCATCGGGGCCTGCAGCCTCCACAGACAGCGAGACCTGTGTGCGAAGCAGAATCCATCCTAGGGACAGTGCTGACCCTCCAAGGCTGGGTCACTGGAGGCTC i nomLeu3.chr11 C 0 C 0 a score=354927.000000 s hg38.chr3_KI270779v1_alt 2408 877 + 205312 CCCGGGTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGGCCGGGCTG-GTCTCC-GGCCTCCTGCCTCCCTTGGTGGAGCACCCTTGCTCCCCAGCACCTC--CCAGGTTCACACAGCTCCTCCC-TGGGGCTGCGCACTGACCCAGGGGCAGGAGGTGGGCCATCCTCTCGGTGGACTGAAGACCTTGTCCGAA-GGGAAAGCAGGGCCGGCCCAAGGCCTGGCTGGAAGAGTGGGTCTTGGTGGCAAAGGCGGCCCGTGGGGGCAGCCCACG-CGAATGCTTCCCCGGCGCCCTGAGCCCCTGACCGCGGCTGAGCCTGCGGTACTCTGGCCCCTCTCGTGGAAAGATGACCTGGGTC-TAC-CATGCTCAGTATCACCCAAAAA-TTCCTAC-AGAAGTCTCTCG-GGACAAGAAAAGGCCTTCTTCCCTCCCTCCTCCTTTCCTCTTCCTTTCTTTCATCAGGGAA-CAGCTTCCGGCTGCCTGCACTGTTTGGGCG-CCGTCATAAGGAGCCGTGACGGCCTTCACAGAGCTCCGGGGCTCACGGGTGTGGCT--GA--CCTG-CCACAAATGGGGCGACAGAGGAGAGGGAGGGTCG--GGCACCGATGGCTCAGGAGGGAAGAGATCCCTTC--TGTATGGGGAGACGGGGGCTTCCTGGAGGGCACTGGAGCGAGGGGCTCACCAGAGTGAGACATCCAAGGGATCTGGGGGACCGGCCA-TGGGACACT----GCGGTCCCACGTGGCTCCTGGATGTGCTGTGTGTTTGC-TGAGCTGGAGGGGACGGGGAG-CCCATGT------------------GTGGGAGAGGGAGAGGCCATGCACGCCCTGAGTCGGGCTTTACAAAAACCTTCTGGGGGCAGCAG-GAGAGGAGCCACGCAGAGGCAGA s panTro5.chr3 538466 864 - 202621043 CCCGGGTCCAGTTG-TTTGGTGG-ACTCCTGGCCAGGCTCCTCCTGG-CTGGGCTGAGTCTCCAGGCCTCCTGCCTCCCTTGA-GGAGCACCCTTGCTTCCCAGCACCCCTGCCCAGTTCACACATCTCCTCCTGCGGCGCTGCGC-CTGACCCAGGG-CAAGAGGTGGCCAATCCTCTCCGTGGACTGAAGACCTTG--CGAACGGGAAAGCCAGGCTGGCCCAAGGCCTGGGTGAAGGAGTGGGTCTTGGTGGCAAAGGCGGCC----GGGGGA--CCACGGCGAATGCCTTCCCGGCGCCCTGAGCCCTGATCCGCGGCTGAGT-TGCGGTAC-CTGGCCT-TCATGGGAAAGGATGACCTGGGTCCTACTCATGCTCAGTATCACCCAAAAACTTCCTACGAGAAGTCTCTCGCGGACAAGAAAGAGCCTT-TTCCCTCC-TCCTCCTT-CCTCTTCCTTTCTTTCATCAGGGAAACAGCTTC-GGCCGCTGCCACTGTTTGGGCGGCCGTCATAAG-AGCCGTGACGGCCTT-ACAGAGTAC--GGGCTCAC---TTTGGCTTGGATCCCTG-CCACAAATGGGGCGACAGAGGAGAGGGAGGGTCGCGGGCAC-GATGCGTCAG-AGGGAAGAGATCCCTTCATGGTATGGA-AGACGGGG-CTTC-TGGAGGGCGCTGGAGCGAGGGGTTCAC-AGGGTGAGACATCCA-GGGA-CTGGGGGACCGGCCACTGGGACACTTGTTGCG-TCCCACGTG-CTCCTG-ATGCGCTGTGTGTTTGCCTGAGCTGA--GGGACGGGGAGGCCCATGT------------------GTGGGAAGGGACGAGGCCATGCACGCCCTGAGTCGGGCTTTACAAAAA-CTTCTGGCGGCAGCAGTGAGAGGAGCCA-GCAGAGGCAGA i panTro5.chr3 I 133 I 264 s gorGor5.CYUI01015777v1 32527 886 - 837792 CCCGGGTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGGCTGGGCTG-GTCTCC-GGCCTCCTGCCTCCCTTGGTGGAGCACCCTTGCTCCCCAGCACCTC--CCAGGCTCACACAGCTCCTCCC-TGGGGCTGCGCACTGACCCAGGGGCAGGAGGTGGGCCATCCTCTCCGTGGACTGAAGACCTTGTCTGAA-GGGAAAGCAGGGCCGGCCCAAGGCCTGGCTGGAAGAGTGGGTCTTGGTGGCAAAGGCGGCCCGTGGGGGCAGCCCACG-CGAATGCCTCCCCGGCGCCCTGAGCCCCTGACCGTGGCTGAGCCTGCGGTACTCTGGCCCCTCTCATGGAAAGATGACCTGGGTC-TAC-CATGCTCAGTATCACCCAAAAA-TTCCTAC-AGAAGTCTCTCG-GGACAAGAAAAGGCCTTCTTCCCTCCCTCCTCCTCTCCTCTTCCTTTCTTTCATCAGGGAA-CAGCTTCCAGCCACCTGCACTGTTTGGGCG-CCGTCATAAGGAGCCGTGACGGCCTTCACAGAGCTCCGGGGCTCACGGGTGTGGCT--GA--CCTG-CCACAAATGGGGCGACA---GAGAGGGAGGGTCG--GGCACCGATGGCTCAGGAGGGAAGAGATCCCTTC--CGTATGGGGAGACGGGGGCTTCCTGGAGGGCGCTGGAGCGAGGGGCTCACCAGGGTGAGACATCCAAGGGACCTGGGGGACCGGCCA-TGGGACACT----GTGGTCCCACGTGGCTCCTGGATGCTCTGTGTGTTTGC-TGAGCTGGAGGGGACGGGGAG-CCCACGTGCCAC------GTGCCTCGCGGGAGCGGGAGAGGCCACGCACGCCCTGAGTCCGGCTTTACAAAAACCTTCTGGCAGCAGTAG-GAGAGGAGCCACACAGAGGCAGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120757231 889 + 123690457 CCCGGGTCTAGTGGCTTTGGTGGGACTCCTGACCAGGCTCCTTCCGGGCTGGGCAG-GTCTCC-GGCCTCCTGCCTTCCTTGATGGAGCACGCTTGCTCCCCAGCACCTC--CCAGGTTCACACAGCTCCTCCC-TGGGGCTGCGCACTGACCCAGGGGCAGGAGGTGGGCCATCCTCTCCGTGGACTGAAGACCTTGTCCGAA-GGGAAAGCAGGGCTGGCCCAAGGCCTGGCTGGGAGAGCCGGTCTTGGTGGCAAAGGCGGCTCGTGGGGGCAGCCCACG-CAAATGC-TTCCCGGCTCCCTGAGCCCCTGACCGCGGCTGAGCCCGCTGTG--CTTGCTCCTCTCATGGAAAGATGACCTGGGTC-TAC-CATGCTCAGTATCACCCAGAAA-TTCCTAC-AGAAGTCTCTTG-GGACAAGAAAAGGCCTTCTTCCCTCCCTCCTCCTTTCCTCTTCCTTTCTTTCATCAGGGAA-CAGCTCC-GGCTGCCTGCACTGTTTGGGCA-CTGTCATAAGAAGCCGTGACGGCCTTCACAGAGCTCCAGGGCTCACGGGTGCAGCT--GA--CCTGCCCACAAATGAGGCGACAGAGGAGAGGGAGGGTCG--GGCACCGATGGCTCAGGAGGGAAGAGATCCCTTC--TGTATGGGGAGACGGGGGCTTCCTGGAGGGAGCCGGAGCAAGGGGCTCACCAGGGTGAGACATCCA-AGGACCTGGGGGACCAGCCA-TGGGACACG----GTGGTCCCACGTGGCTCCTGGACGCGC--TGTGTTTGC-TGAGCTGGAGGAGACGGGGAG-CCCACGTGCCAAACGCGGGCACCTCGCGGGAACGGGAGAGGCCATGCACGCCCTGAGTCCGGCTTTACAAAAACCTTCTGGCAGCAGTAG-GAGAGGAGACACACAGAGGCAGA i nomLeu3.chr11 C 0 C 0 a score=2346.000000 s hg38.chr3_KI270779v1_alt 3285 8 + 205312 GCCAGGGA s gorGor5.CYUI01015777v1 33413 8 - 837792 GCCAGGGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120758120 8 + 123690457 GCCAGGGA i nomLeu3.chr11 C 0 C 0 e panTro5.chr3 539330 264 - 202621043 I a score=14983.000000 s hg38.chr3_KI270779v1_alt 3293 33 + 205312 GAGGCGGTGGGGTAGTGAGGGGGATGTCGGGGT s panTro5.chr3 539594 32 - 202621043 GAGGTGGTGGGATAGTGAAGGG-ATGTCGGGGT i panTro5.chr3 I 264 C 0 s gorGor5.CYUI01015777v1 33421 32 - 837792 GAGGCGGTGGGGTAGTGAGGGG-ATGTTGGGGT i gorGor5.CYUI01015777v1 C 0 I 701 s nomLeu3.chr11 120758128 32 + 123690457 GAGGCGGTGGGGTAGTGAGGGG-ATGTTGGCGT i nomLeu3.chr11 C 0 C 0 a score=30741.000000 s hg38.chr3_KI270779v1_alt 3326 67 + 205312 GCACGGGTTAGGAGACCCCCGAGTCCTGGGACCTGCATGCTGATAGTCAAGGTTGCAGAGGCGGCTG s panTro5.chr3 539626 67 - 202621043 GCCTGGGTTGGGAGACCCCCAAGCCCTGGGACCTGCATGCTGATGGTCAAGGTTGCAGAGGCGGCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 34154 67 - 837792 GCACGGGTTGGGAGACCCCTGAGCCCTGGGACCTGCATGCTGATGGTCAAGGTTGCAGAGGCGGCTG i gorGor5.CYUI01015777v1 I 701 I 203 s nomLeu3.chr11 120758160 58 + 123690457 GCACGGGTTGGGAGACCCCCGAGCCCTGGGACCTGCATGCTGATGGTCAAGGTTGCTG--------- i nomLeu3.chr11 C 0 C 0 a score=38012.000000 s hg38.chr3_KI270779v1_alt 3393 72 + 205312 CTGTGGTGACCACAGGGCAGGGAGAGGCAGTGGGGTAGTGAGGGAATGTCGGGGTGCACAGCACCAGACCCT s panTro5.chr3 539693 72 - 202621043 CTGTGGTGACCACAGGGCAGGGAGAGGCAGTGGGGTAGTGAGGGAATGTCGGGGTGCACAGCACCAGACCCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 34424 72 - 837792 CTGTGGTGACCACAGGGCAGGGAGAGGTGGTGGGGTAGTGAGGGGATGTCGGGGTGCACAGCGCCAGACCCT i gorGor5.CYUI01015777v1 I 203 C 0 s nomLeu3.chr11 120758218 72 + 123690457 CTGTGGCGACCACAGGGCAGGGAGAGGAGGTGGGGTAGTGAGGGGATGTCAGGGTGCAGAGCGCCAGACCCT i nomLeu3.chr11 C 0 I 8217 a score=2800.000000 s hg38.chr3_KI270779v1_alt 3465 1 + 205312 C s panTro5.chr3 539765 1 - 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 34496 1 - 837792 C i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120766507 1 + 123690457 C i nomLeu3.chr11 I 8217 C 0 s rheMac8.chr6 230119 1 + 180051392 C i rheMac8.chr6 N 0 C 0 s macFas5.chr6 179960741 1 - 181584905 C i macFas5.chr6 N 0 C 0 s cerAty1.NW_012009470v1 16183474 1 + 16742782 C i cerAty1.NW_012009470v1 N 0 C 0 s chlSab2.chr4 89530590 1 - 91010382 C i chlSab2.chr4 N 0 C 0 a score=14076.000000 s hg38.chr3_KI270779v1_alt 3466 4 + 205312 CCAG s panTro5.chr3 539766 4 - 202621043 CCAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 34497 4 - 837792 CCAG i gorGor5.CYUI01015777v1 C 0 I 3677 s nomLeu3.chr11 120766508 4 + 123690457 CCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230120 4 + 180051392 CCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960742 4 - 181584905 CCAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16183475 4 + 16742782 CCAG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530591 4 - 91010382 CCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134064 4 + 6207128 ccag i manLeu1.NW_012109696v1 N 0 C 0 a score=3356.000000 s hg38.chr3_KI270779v1_alt 3470 2 + 205312 AT s panTro5.chr3 539770 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120766512 2 + 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230124 2 + 180051392 AC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960746 2 - 181584905 AC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16183479 2 + 16742782 AC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530595 2 - 91010382 AC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134068 2 + 6207128 ac i manLeu1.NW_012109696v1 C 0 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=40801.000000 s hg38.chr3_KI270779v1_alt 3472 13 + 205312 CTTCTGATTCAGT s panTro5.chr3 539772 13 - 202621043 CTTCTGATTCAGT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120766514 13 + 123690457 CTTCTGATTCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230126 13 + 180051392 CTTCCGATTCAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960748 13 - 181584905 CTTCCGATTCAGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16183481 13 + 16742782 CTTCCGATTCAGT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530597 13 - 91010382 CTTCCGATTCAGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134070 13 + 6207128 cttccgattcagt i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 33739 13 + 514179 CTTCAGATTCAGT i colAng1.NW_012118799v1 N 0 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=9000.000000 s hg38.chr3_KI270779v1_alt 3485 2 + 205312 CC s panTro5.chr3 539785 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120766527 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230139 2 + 180051392 CC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960761 2 - 181584905 CC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16183494 2 + 16742782 CC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530610 2 - 91010382 CC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134083 2 + 6207128 cc i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 33752 2 + 514179 CC i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 132440 2 - 16417988 CC i saiBol1.JH378155 N 0 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=59200.000000 s hg38.chr3_KI270779v1_alt 3487 14 + 205312 TGGGGggaccctac s panTro5.chr3 539787 14 - 202621043 TGGGGGGACCCCAC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120766529 14 + 123690457 TGGGGggaccctac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230141 14 + 180051392 TCGGGggaccctac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960763 14 - 181584905 TGGGGggaccctac i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16183496 14 + 16742782 TGGGGggaccctac i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530612 14 - 91010382 TGGGGggaccctac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134085 13 + 6207128 tggggggaccc-ac i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 33754 14 + 514179 TCGGGggaccccac i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 170653 14 - 204313951 TGGAGggaccctac i calJac3.chr2 N 0 C 0 s saiBol1.JH378155 132442 14 - 16417988 tgcagggaccctac i saiBol1.JH378155 C 0 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=50885.000000 s hg38.chr3_KI270779v1_alt 3501 15 + 205312 cccagatcttcca-at s panTro5.chr3 539801 15 - 202621043 CCATTATCTTCTG-AT i panTro5.chr3 C 0 I 570 s nomLeu3.chr11 120766543 15 + 123690457 cccagatcttcct-at i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230155 15 + 180051392 cccagatcttctg-at i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960777 15 - 181584905 cccagatcttctg-at i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53298 15 - 100774 cccagatcttctg-at i macNem1.NW_012013899v1 N 0 C 0 s cerAty1.NW_012009470v1 16183510 15 + 16742782 cccagatcttctg-at i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530626 15 - 91010382 cccagatcttctg-at i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134098 15 + 6207128 cccagaccttccg-at i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 33768 15 + 514179 cccgggccttccg-at i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 170667 13 - 204313951 cccagaacttcca--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132456 14 - 16417988 cccagaacttccat-- i saiBol1.JH378155 C 0 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=1167532.000000 s hg38.chr3_KI270779v1_alt 3516 243 + 205312 tcagtcctggttcggcctgagaatttgcatttttaacatgtccaggGACCACAGTTTGAAAACCTCCACGGCTGACATGTAATGGGATGACATGGTCCAATAAATGAAGGAAAAATAACAGG-----------TGGCAACCTCAGGCAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGAACAAAGAATTAAAAA-C s panTro5.chr3 540386 241 - 202621043 tcagtcctggttcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCCACGG-TGACATGTAATGGAATGACATGGTCCAATAAATGAAG-AAAAGTAACAGG-----------TGGGAACCTCAGGCAG-TTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGGATACTCAGAGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGAACAAAGAATTAAAAAAC i panTro5.chr3 I 570 C 0 s nomLeu3.chr11 120766558 241 + 123690457 tcagtcctggttcggcctgagaatttgcatttctaacatgtccaggGACCACAGCTTGAAAACCTCCATGGCAGACATGTAATGGGATGACATGGTCCAATAAATGAAGGAAAAATAACAGG-----------TGGCAACCTCAGGCAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATACAGGCGTTTGAGCAAATATTT--GTGTTAGGACAAAGAATTAAAAA-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230170 228 + 180051392 tcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACG-TTGAGCAGACATTTAAGTGTCAGGACAAATAATTAAAAA-C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179960792 229 - 181584905 tcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCGGGACAAAGAATTAAAAA-C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53313 229 - 100774 tcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCGGGACAAAGAATTAAAAA-C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16183525 229 + 16742782 tcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCTAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATACGGACGTTTGAGCAGACATTTAAGTGTCAGGACAAAGAATTAAAAA-C i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530641 229 - 91010382 tcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCCTCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCAGGACAAAGAATTAAAAA-C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134113 229 + 6207128 tcagtccaggttcagcctgagaatttgcatttctaacatgtccagggaccacagtttgaaaaccTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCAGGACAAAGAATTAAAAA-C i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 33783 225 + 514179 tcagtcctggttcagcctgagaatttgcatttctaacatgtccggggaccacagtttgaaaaccTCC-------------AATGGCA-GACATGGTCCAATAAGTGAAGGAAAAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAAGCAGTAAGAAAGTAAAT-------GCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTTAGGACAAAG----AAAAA-C i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 170680 260 - 204313951 tcagtcctggttaggcctgagaattggcatttctaacatgcccaggGACCACAGTTTGGAAACCTCTGTGGCAGACATGTAATGGGATGACACGGTCCGATAAACGGGGGAACAACAACAGGTGGAGACCCCCTGGCAACCTCAGGAAGCTTCATCCCAGCCAGTAAGAAAGTAAATCCCCAAGCCTTCTGAAAACTAAGAGT-AGTATTAACACGGGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAG-C i calJac3.chr2 C 0 I 294 s saiBol1.JH378155 132470 256 - 16417988 tcagtcctggttaggcctgagaattggcatttctaacatgcccaggGACCACAGTTTGAAAATCTCCATGGCAGACATGTAAGAGGATAACACGGTCCAATAAACGAAGG---AAAAACAGGTGGAGA-CTCCTGGCAACCTCAGGCAGCTTCATCCCAGCCAGTAAGAAAGTAAATCCCCAAGCCTTCTGTAAACTAAGAAT-AGTGTTAACACAGGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAA-C i saiBol1.JH378155 C 0 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=17270.000000 s hg38.chr3_KI270779v1_alt 3759 3 + 205312 TAG s panTro5.chr3 540627 3 - 202621043 TAG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120766799 3 + 123690457 TAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230398 3 + 180051392 TAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179961021 3 - 181584905 TAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53542 3 - 100774 TAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16183754 3 + 16742782 TAG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530870 3 - 91010382 TGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134342 3 + 6207128 TAG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 34008 3 + 514179 TAG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 171234 3 - 204313951 TAG i calJac3.chr2 I 294 C 0 s saiBol1.JH378155 132726 3 - 16417988 TAG i saiBol1.JH378155 C 0 I 305 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=1712501.000000 s hg38.chr3_KI270779v1_alt 3762 329 + 205312 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAGGGCTGATTTAGTTTCCAAGAAATAACTGACAGGCAGTG---TTGTGCGTGTGTC----TACTACTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGTACTCCAGTAA----TGAGTCATGGAACAATGTTTCATATTGAAAATGTTTTTGTAAATGTGGGTTTCAAGGTTTCAAAGTGAACCCGTATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATAT s panTro5.chr3 540630 327 - 202621043 CACAGGCACCCCTGAAGCATGATAGGTGTG-GCAACAGAAGGGCTGATTTAGTTTCCGAGAAATAACTGACAGGCAGTG---TTGTGCGCGTGTC----TACCGCTTAGGAACACAAA-CAAACCTTCAGACCGTTTTCATAAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGTGCTCCAGTAA----AGAGTCATGGAACA-TGTTTCATATTGAAAATGTTTTTGTAAATGTGGGTTTCAGGGTTTCAA-GTGAACCCATATGTGTTAGGAGAAAAGACACACCAAAGCAGTAAAATAAATTGGTCAATAT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120766802 328 + 123690457 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGGAGGGCTGATTTAGTTTCCGAGAAATAACTGACAGGCAGTG---TTGTGTGTGTGTC----TACTACTTAGGAACCCAAAATAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGAACTCCACTAA----TGAGTCATGGAACGATGCTTCATATTGAAAATG-TTTTGTAAATGTGAGTTTCAAGGTTTCAAAGTGAACCCGTATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230401 331 + 180051392 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAG-GCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTCTACTTACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAACCATGTTTCATACCAAAAATA-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGAAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179961024 327 - 181584905 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAG-GCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTC----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGAAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAACCATGTTTCATACCAAAAATG-TTTTGTAAATGTGCGTTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCTATGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53545 327 - 100774 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAG-GCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTC----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAGCCATGTTTCATACCGAAAATA-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16183757 327 + 16742782 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAG-GCTGATTTAGTTTCCGAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTC----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACGAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAACCATGTTTCATACCGAAAATG-TTTTGTAAATGTGGGCTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACATGCCAAAGAAGTAAAATAATTGGGTCAATAT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89530873 327 - 91010382 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAG-GCTGATTTACTTTCCGAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTC----TACTGCTTAGGAACCCAGAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGGAGATGTTTATGGTACTCCACTCA----TGAGTCGTGGAACCATGTTTCATACCGAAAACG-TTTTGTAAATGTGGGCTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134345 327 + 6207128 CACAGGCACCCCTGAAGCATGATAGG-ATG-GCAACAGAAG-GCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTC----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCATTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAACCATGTTTCATACCGAAAATG-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAAAAGTAAAATAATTGGGTCAATGT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 34011 328 + 514179 CACAGGCACCCCTGAAGCATGATAGG-ACG-GCAACAGAAGAGCTGATTTAGTTTCCAAGAAACAGCTGACAGGCAGTG---TTGTGTGTGTGTC----TACTGCTTAGGAACCCAAAACAAACCTTCAGACTGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTTCTCCACTAA----TGAGTCATGGAACCATGTTTCATACTGAAAATG-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAGCGAACCCATATGTGTTAGGAGAAAGGACATACCAAAGAAGTAAAATAGTTGGGTCAATAT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 171237 320 - 204313951 CACAGGCACCCCTGAAGTATGATAGG-GTG-GCAACGGAAGGGCCAATC-----------GAATAACTGCTGGGCAGCTTCCTTGTGTGTATGTC----TACTA---AGGAATCAGAAACAAACCCTCAGACAGTTCTCATGAGTACTGAGACCAAGGAAGCCACTGGGCAGTGGGTGGTCTGAAAA-GTAAATTTTTATAGTGCTCCACTAATTACTGAGTCATAGAACGATGTTTCATATTGAAAATG-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAATGAACCCATGCTTGTTCAGAGAAAGGACAAACCAAAGAAGTAAAATCATTGGGTCAATAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133034 333 - 16417988 CACAGGCACCCCTGAAGCATGATAGG-ATGCGCAACGGAAGGGCCAATTTCATTTCCAAGAAATAACTGCTGGGCAGCTTCCTTGTGTGTATGTC----TACTA---AGGAACCAGAAACAAATCTTCAGACAGTTTTCATGAGTACTGAGACCAAGAAAACCATTGGGCAGTGGGTGGTCTGAAAATGTAAATTTTTATAGTACTCCACTAATTACTGAGTCATGGAATGATGTTTCATATTGAAAATG-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAATGAACTCATACTTGCTAGGAGAAAGGACAAACCAAAGAAGTAAAATAATTGGGTCAATAT i saiBol1.JH378155 I 305 I 142 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=511436.000000 s hg38.chr3_KI270779v1_alt 4091 104 + 205312 AAAAAGAAAGTAGAATACTGCCCAGAGAGAAGATGTGGATAATTCCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGAGTAAGATATTCAGACCTGCAC s panTro5.chr3 540957 99 - 202621043 AAAAAGAAAGTAGAATACTGCC-AGAGAGAAGATGTGGATAATTC-TAACACGGATCAAAGGCAC-AAAAAGGTGAGCTGTG--TAAGATATTCAGACCTGCAC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767130 100 + 123690457 AA----AAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTCCTAACACGGTTCAAAGGCACCAAAAAGGTGAGCTGTGAGTAAGATATTCAGACCTGCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230732 104 + 180051392 AAAATGAAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGTTTAAGATATTCAGACCCGCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179961351 101 - 181584905 AAAAAGAAAGTAGAATATTGCCCAGAG---ACATGTGGATAATTCCTAACATGGATCAAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATACTCAGACCTGCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53872 104 - 100774 AAAATGAAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGTTTAAGATATTCAGACCCGCAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16184084 101 + 16742782 AAAAAGAAAGTAGAATATTGCCCAGAG---ACATGTGGATAATTCCTAACATGGATCAAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATATTCAGACCTGCAC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531200 101 - 91010382 AAAAAGAAAGTAGAATATTGCCCAGAG---ACATGTGGATAATTCCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATATTCAGACCCGCAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134672 101 + 6207128 AAAAAGAAAGTAGAATATTGCCCAGAG---ACATGTGGATAATTCCTAACATGGATCAAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATACTCAGACCTGCAC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 34339 104 + 514179 AAAATGAAAGTAGAATATTGCCCACAGAGAAGATGTGGATAATTCCTAACACGGATCGAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATATTCAGACCTGCAC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 171557 104 - 204313951 AAAAAGAACGTAGAATGTTGCCCGGAGAGAAGGCGTGGATAATTCCTAACACGGATCAAAGGCAGGAAAAAGGTGAGCTGTGTCTGAGATACTCAGACCTGCAC i calJac3.chr2 C 0 I 5724 s saiBol1.JH378155 133509 104 - 16417988 AAAAAGAAGGTAGAATGTTGCCTAGAGAGAAGGCGTGGATAATTCCTAACATGGATCAAAGGCAGGAAAAAGGTGAGCTGGGTCTGAGATACTCAGACCTGCAC i saiBol1.JH378155 I 142 I 5247 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=12759.000000 s hg38.chr3_KI270779v1_alt 4195 5 + 205312 -CATCC s panTro5.chr3 541056 6 - 202621043 GCATCC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767230 4 + 123690457 -CG-CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 230836 5 + 180051392 -CATCC i rheMac8.chr6 C 0 I 3554 s macFas5.chr6 179961452 5 - 181584905 -CGTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 53976 5 - 100774 -CATCC i macNem1.NW_012013899v1 C 0 I 3877 s cerAty1.NW_012009470v1 16184185 5 + 16742782 -CGTTC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531301 5 - 91010382 -CGTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134773 5 + 6207128 -CGTCC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 34443 5 + 514179 -CGTCC i colAng1.NW_012118799v1 C 0 C 0 e calJac3.chr2 171661 5724 - 204313951 I e saiBol1.JH378155 133613 5247 - 16417988 I e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=30736.000000 s hg38.chr3_KI270779v1_alt 4200 13 + 205312 CCTGCATTAGACA s panTro5.chr3 541062 13 - 202621043 CCTGCATTAGACA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767234 13 + 123690457 CCTGCAGTAGACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179961457 13 - 181584905 CCTGCAGTAGACA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16184190 13 + 16742782 CCTGCAGTAGACA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531306 13 - 91010382 CCTGCAGTAGACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134778 13 + 6207128 CCTGCAGTAGACA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 34448 13 + 514179 CGTGCAGTAGACA i colAng1.NW_012118799v1 C 0 I 3274 e macNem1.NW_012013899v1 53981 3877 - 100774 I e calJac3.chr2 171661 5724 - 204313951 I e saiBol1.JH378155 133613 5247 - 16417988 I e rheMac8.chr6 230841 3554 + 180051392 I e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=8022.000000 s hg38.chr3_KI270779v1_alt 4213 4 + 205312 CAGA s panTro5.chr3 541075 4 - 202621043 CAGA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767247 4 + 123690457 CAGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179961470 4 - 181584905 CAGA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16184203 4 + 16742782 CAGA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531319 4 - 91010382 CAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134791 4 + 6207128 CAGA i manLeu1.NW_012109696v1 C 0 C 0 e macNem1.NW_012013899v1 53981 3877 - 100774 I e calJac3.chr2 171661 5724 - 204313951 I e saiBol1.JH378155 133613 5247 - 16417988 I e colAng1.NW_012118799v1 34461 3274 + 514179 I e rheMac8.chr6 230841 3554 + 180051392 I e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=799095.000000 s hg38.chr3_KI270779v1_alt 4217 176 + 205312 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTATGAGGATGAAAAAAGTTAGCATTCATGGAATGAGGCACTGACGAAACTGAAAAGCTGGAATAACCCCATGAAATAACGAGAATAATTGTAGTATTCTG--------------------AAC-CGGGGCACAGGACACAGGACTGG s panTro5.chr3 541079 169 - 202621043 CAACAT-TTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAAGGACTATG-GGATGAAAAA-GTTAGCATTCATGGAATGAGGCACTGAAGAAACT-AAAAGCTGGAATAACCCCATGAA-TAA-GAGAATAATTGTAGTATTCTG--------------------AAC-CGGGG-ACAGGACACAGGACTGG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767251 175 + 123690457 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTA-GAACTATGAGGATGAAAAAAGTTAGCATTCATGGGATGAGGCACTGAAGAACCTGAAAAGCTGGAATAACCCCATGAAGTAATGAGAATAACTGTAGTACCCTG--------------------AAC-TGAGGTACGGGACACAGGGCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 234395 186 + 180051392 caacatcttGGCAGGCAAATTAGTGAAAATTCAGAGACAACGCTTGGAACTACAAGGATGAAAAG----AGCATTAGTGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAAAAACCCCACGAAATAATAAGAATAATTGTAGTATCCTGAAC-------cagggcacaggacacaggacacaggacacaggacTGG i rheMac8.chr6 I 3554 C 0 s macFas5.chr6 179961474 186 - 181584905 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAATCCTAGGAACTACGAGGATGAAAAATGTTAGCATTCTTGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAATAACCCCATGAAATAATGAGAATAATTGTAGTAGCCTG----------TAGTATCCTGAAC-CGGGGCACAGGTCACAGGACTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 57858 193 - 100774 caacatcttGGCAGGCAAATTAGTGAAAATTCAGAGACAACGCTTGGAGCTACGAGGATGAAAAG----AGCATTAGTGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAAAAACCCCACGAAATAATGAGAATAATTGTAGTATCCTGAACcagggcacaggacacaggacacaggacacaggacacaggacTGG i macNem1.NW_012013899v1 I 3877 C 0 s cerAty1.NW_012009470v1 16184207 186 + 16742782 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTACGAGGATGAAAAATGTTAGCATTCTTGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAATAACCCCATGAAATAATGAGAATAATTGTAGTAGCCTG----------TAGTATCCTGAAC-CGGGGCACAGGTCACAGGACTGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531323 186 - 91010382 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTACGAGGATGAAAAAAGTTAGCATTCATGGAATGGGGCACTGAAGAACCTGAAAAGCTGGAATAACTCCATGAAATAATGAGAATAATTGTAGCAGCCTG----------TAGTATCCTGAAC-CGGGGCACAGGTCACAGGACTGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6134795 186 + 6207128 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTACGGGGATGAAAAAAGTTAGCATTCATGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAATAACCCCATGAAATAATGAGAATAATTGTAGTAGTCTG----------TAGCATCCTGAAC-CGGGGCACAGGTCACAGGACTGG i manLeu1.NW_012109696v1 C 0 I 14 s colAng1.NW_012118799v1 37735 172 + 514179 caacatcttggtaggcaaattagtgaaaattcagaGACAACCCTTGGAACTACGAGGATGAAAAG----AGCATTCATGGAAGGAAGCACTGAAGCACCTGAAAAGCTGGAAAAACCCCACGAAATAATGAGAATAATTGTAGTAGCCTG--------------------AAC-CAGGGCACAGGACACAGGACTGG i colAng1.NW_012118799v1 I 3274 C 0 s calJac3.chr2 177385 176 - 204313951 caacatctgggtgggcaactgggtgaaaattcagagaaaaccttaggaactctgaggatgaaaaaagttagCGTTCATGGAAGGAGGCACTGAAGAACATAAAAAACTGGAATAACGCTATGAAATAATGACAATAATTGTAGTATCCTG--------------------AAC-AGGGACACAGGACACGGGACTGA i calJac3.chr2 I 5724 C 0 s saiBol1.JH378155 138860 171 - 16417988 caacatctgggtaggcaactgggtgaaaattcagagaaaaccttaggaactctgaggattaaaaaag-TAGCGTTCATGGAAGGAGGCACTGAAGAACATAAAATACTAGAATAACGCTATGAAATAG----AATAATTGCAGTATCCTG--------------------AAC-TGGGACACAGGACACAGGACTGA i saiBol1.JH378155 I 5247 C 0 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=42506.000000 s hg38.chr3_KI270779v1_alt 4393 23 + 205312 AGTGGAAGGCCGCATGAGACCAC s panTro5.chr3 541248 23 - 202621043 AGTGGAAGGCCGCATGAGACCAC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767426 23 + 123690457 CGTGGAAGGCAGCACGAGACTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 234581 14 + 180051392 GGTGGAAGGCGGCA--------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179961660 22 - 181584905 GGTGGAAGGCAGCACG-GAGTAC i macFas5.chr6 C 0 I 3 s macNem1.NW_012013899v1 58051 14 - 100774 GGTGGAAGGCGGCA--------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16184393 22 + 16742782 GGTGGAAGGCGGCACG-GAGTAT i cerAty1.NW_012009470v1 C 0 I 3 s chlSab2.chr4 89531509 22 - 91010382 GGTGGAAGGCGGCACG-GAGTAC i chlSab2.chr4 C 0 I 3 s colAng1.NW_012118799v1 37907 23 + 514179 GGTGGAAGGCGGCACGAGACTAC i colAng1.NW_012118799v1 C 0 I 3 s calJac3.chr2 177561 23 - 204313951 GATGGAACGCGCGCCGAGAGCGC i calJac3.chr2 C 0 I 9 s saiBol1.JH378155 139031 23 - 16417988 GGTGGAACGCCGACTGAAAGCGC i saiBol1.JH378155 C 0 I 9 e manLeu1.NW_012109696v1 6134981 14 + 6207128 I e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=836580.000000 s hg38.chr3_KI270779v1_alt 4416 198 + 205312 CC---CGGG--AAAGACCCAGGGATCACACTGGC----CCAAAGGTG--GGCACTTCCCAACTCC-GGGATTTGT--------GATACAGGCACTCCAGGCTCCACCATAGAACTGTGTCCAGCACGAAGGCAGTGCT-----GTCTT--GCGGGAGGCAGGGCTGCACCACCAC--AGGGGCGGGAAGGGGCCCGGCAGGGAGGCG-CCCAGTGTTT-CCAGCTGCAC s panTro5.chr3 541271 194 - 202621043 CCG-GCGGG--AAAGACCCAGG-ATCACACTGGC----CCAAAGGTGTGGGCACTTCC-AACTCC-GGGATTTGT--------GCTACAGGCACTCCAGGCTCCACCATAGA-CTGTGTCCAGCACGAAGGCAGTGCT-----GTCTT--GCGGGAG-CAGGGC-GCACCACCAC--CGGGGCGGGAAGGCGC--GGCAGGGAGGC---CCAGTGTTTTCCAGCTGCAC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767449 202 + 123690457 GCGCGCGGG--AAAGACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCTGGGGATTTGT--------GCTACAGGCACTCCAGGCTCCACGGTAGAACTGTGTCCAGCACGAAGGCAGTGCT-----GTCTC--GGGGGAGGCAGGGCTGCACCACCAC--TGGGGCGGGAAGGGGCCCCGCAGAAAGGCG-CCCAGTGTTT-CCAACTGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 234595 193 + 180051392 -----------AAG-ATCCAGGGATCATAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGCTCCACCGCAGAACCGTGTCCAGCACGGAGGCAGTGCT-----GTCTC--GGGGGAGACAGGGCTGCACCACCACCAAGGGGCGGGAAGGGACCGGGCAGGGAGGCG-CCCAGTGTTG-CCAGCTGCA- i rheMac8.chr6 C 0 I 2 s macFas5.chr6 179961685 199 - 181584905 ---CGCGGG--AAA-ACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGCGATTGGT--------GCTACAGGCACTCCAGGTTCCACCGCAGAACTGTGTCCAGCACGGAGGCAGTGCT-----GTCTC--GGGGGAGACAGGGCTGCACCACCACC-AGGGGCGGGAAGGGGTCAGGCAGGGAGGCG-CCCAGTGTTT-CCAGCTGCAC i macFas5.chr6 I 3 I 9 s macNem1.NW_012013899v1 58065 181 - 100774 -----------AAG-ACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGCTCCACCGCAGAACCGTGTCCAGCACGGAGGCAGTGCT-----GTCTC--CGGGGAGACAGGGCTGCACCA------------GGGAAGGGACCGGGCAGGGAGGCG-CCCAGTGTTG-CCAGCTGCA- i macNem1.NW_012013899v1 C 0 I 2 s cerAty1.NW_012009470v1 16184418 200 + 16742782 ---CGCGGG--AAA-ACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGCTCGACGGCAGAACTGTGTCCAGCACGAAGGCAGTGCT-----GTCTC--GCGGGAGACAGGGCTGCACCACCACC-AGGGGCGGGAAGGGGTCAGGCAGGGAGGCGCCCCAGTGTTT-CCAGCTGCAC i cerAty1.NW_012009470v1 I 3 I 9 s chlSab2.chr4 89531534 199 - 91010382 ---CGCGGG--AAA-ACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGTTCCACCGCAGAACTGTGTCCAGCACGAAGGCAGTGCT-----GTCTC--GCGGGAGGCAGGGCCGCACCACCACC-AGGGGCGGGAAGGGGTCA-GCAGGGAGGCGCCCCCGTGTTT-CCAGCTGCAC i chlSab2.chr4 I 3 I 9 s manLeu1.NW_012109696v1 6134995 200 + 6207128 ---CGCGGG--AAAGACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGCGATTGGT--------GCTACAGGCACTCCAGGCTCCACCGCAGAACTGTGTCCAGCACGGAGGCAGTGCT-----GTCTC--GGGGGAGGCAGGGCTGCACCACCACC-AGGGGCGGGAAGGGGTCAGGCAGGGAGGCG-CCCAGTGTTT-CCAGCTGCAC i manLeu1.NW_012109696v1 I 14 I 9 s colAng1.NW_012118799v1 37933 198 + 514179 ---CGCGGC--AAAGACCCAGGGATCACAGTGGC----CCAAAGCTG--GGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGCTACACCGCAGAACTGTGTCCAGCATGGAAGCAGTGCT-----GTCTC--GGGGGAGGCAGGGCTGCACCACCA---CGGGGCGGGAAGGGACCGGGCAGGGAGGCG-CCCAGTGTTT-CCAGCTGCAC i colAng1.NW_012118799v1 I 3 M 1850 s calJac3.chr2 177593 210 - 204313951 ---CACGGG--AAAGACCCGGGGATCGCAGTTGCCCGACCGAAGCC---GGCACTTCCCAATTCCGGGGATTTGTAGGTTTCGGCTACAAGCACTCCGGGCTCCACTGTAGAACTGCGCCCAGCACCAAGGCAGTGCTCCTCCCTCTCAGGAGGGAGGCTGGGCTGCGCGACCACC-AG--------AAgggcccggccggggggcg-ccgAGTGTTT-CCAGCTGCAc i calJac3.chr2 I 9 I 1 s saiBol1.JH378155 139063 203 - 16417988 ---CGCGGGGCAAAGACCCAGGGATCACAGTCGC----CCAAAGCT---GGCACTGCCCAATTCCGGGGATTTGTAGGTTTCGGCTACAAGCACTCCAGGCTCCACTGTAGAACTGTGCCCAGCACCAAGGCAGTGCT-----GTCTCAGGAGCGAGGCTGGGCCGCGCGACCAGC-AG--------ATGGGCCCGGCAGGGGGGCG-CCCAGTGTTT-CCAGCTGCAC i saiBol1.JH378155 I 9 I 1 e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=158638.000000 s hg38.chr3_KI270779v1_alt 4614 51 + 205312 CGG--TCGGGGACCGCGCTGATGCAGAGCGCGGGGGCGCAGGTTAAACCTAAA s panTro5.chr3 541465 49 - 202621043 GGG--TCGGG-ACCGCGCTGATGCAGAGCGCGGGG-CGCAGGTTAAACCTAAA i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767651 52 + 123690457 GGGGTCCAGG-GCAGCGCTGATGCAGAGCGTGGGGGAGCAGGTTAAACCTAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 234790 51 + 180051392 GCG--TCGGGGGCGGCGCTGAGGCAGAGCGCGGGGGCGCAGGTTAAACCTAAA i rheMac8.chr6 I 2 C 0 s macFas5.chr6 179961893 51 - 181584905 GCG--TCGGGGGTGGCGCTGATGCAGAGCGTGGGGGCGCAGGCTAAACCTAAA i macFas5.chr6 I 9 C 0 s macNem1.NW_012013899v1 58248 51 - 100774 GCG--TCGGGGGCGGCGCTGAGGCAGAGCGCGGGGGCGCAGGTTAAACCTAAA i macNem1.NW_012013899v1 I 2 C 0 s cerAty1.NW_012009470v1 16184627 51 + 16742782 GCG--TCGGGGGTGGCGCTGATGCAGAGCGCGGGGGCGCAGGCTAAACCTAAA i cerAty1.NW_012009470v1 I 9 C 0 s chlSab2.chr4 89531742 51 - 91010382 GCG--TCGGGGGTGGCGCTGATGCAGAGCGCGGGGGCGCAGGCTAAACCTAAA i chlSab2.chr4 I 9 C 0 s manLeu1.NW_012109696v1 6135204 51 + 6207128 GCG--TTGGGGGTGGCGCTGATGCAGAGCGCGGGGGCGCAGGCTAAACCTAAA i manLeu1.NW_012109696v1 I 9 C 0 s calJac3.chr2 177804 48 - 204313951 ggg--gcgggggccgcgctgctgccccgcgcg-gggcACAGGTTAAACCCA-- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 139267 46 - 16417988 CGG--GCGGG---CCTGCTGATGCCCGGGACGTGGGCACAGGTTACACCCA-- i saiBol1.JH378155 I 1 C 0 e colAng1.NW_012118799v1 38131 1850 + 514179 M e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=211091.000000 s hg38.chr3_KI270779v1_alt 4665 106 + 205312 GGAGGGAAGCTTTTGGGGGCGGAACAGACAACGGAGAACGCTGCACACTGCCCTTCCCACGCGAATTGTGCTTTGCCttttttttttttttttttttttttg----agac s panTro5.chr3 541514 109 - 202621043 GGAGGGAAGCTTT-GGGGGCGGAACAGACAACGGAGAACGCTGCACACTGCCCTTCCCACGCGAATTGTGCTTTGCCtttttttttttttttttttttttttttttagac i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767703 93 + 123690457 AGAGAGAAGCTTTTCAGGGTGGAACAGACAACAGAGAACGCTGCACACTGCCTTTCCCACCCGAATTGTGATTTGCCtttttttttttg-----------------agac i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179961944 98 - 181584905 AGAGGGAAGCTTTTGGGGGCGGAACAGACAACA-------CTGCACACTGCCCTTCCCACCCGAATTGTGttttaccttttttttttcttttttctttttg-----agac i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16184678 98 + 16742782 AGAGGGAAGCTTTTGGGGGCGGAACAGACAACA-------CTGCACACTGCCCTTCCCATCCGAATTGTGttttaccttttttttttcttttttctttttg-----agac i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531793 98 - 91010382 AGAGGGAAGCTTTTGGGGGCGGAACAGGCAACA-------CCGCACACTGCCCTTCCCACCCGAATGGTGttttaccttttttttttcttttttctttttg-----agac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6135255 91 + 6207128 AGAGGGAAGCTTTTGGGGGCGGAACAGACAACA-------CTGCACACTGCCCTTCCCACCCGAATTGTGttttacctttt-------ttttttctttttg-----agac i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 177852 93 - 204313951 -GAGGGAAGCTTTCGAGGACGGAAGAGACGACGGAGAACGCCGCACACTGTGCTTCTCACCTGAATTGTGttttgct-----------ttttttttttttg-----agat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 139313 90 - 16417988 -GAGGGAAGCTTTCGAGGGCGGAGGAGACGACGGAGAACGCCGCACACGGCGCTTCTCACCCGAATTGTGttttgc--------------tttctcttttg-----agat i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 58299 0 - 100774 C e colAng1.NW_012118799v1 38131 1850 + 514179 M e rheMac8.chr6 234841 0 + 180051392 C e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=577482.000000 s hg38.chr3_KI270779v1_alt 4771 154 + 205312 ggagttttgctcttgttgcccaggcctggagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcgtcccgagtagctgggattacaggcgtgcgccaccacgcccggc---taattttgtat s panTro5.chr3 541623 150 - 202621043 gga-ttttgctcttgttgcccaggcctggagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagca-ttctcctgcctcagcgtcccgagtagctgggattacaggcgtgcgca--caagcccggc---taattttgtat i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767796 157 + 123690457 ggagttttgctcttgttgcccaggcctggagtgcaatggcctgatctcggctcactgcaatctccgcctcccggattcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgtgagccaccgcacccggcctgtttttTTGTGT i nomLeu3.chr11 C 0 I 8 s rheMac8.chr6 234841 152 + 180051392 ggagtttcgctcttgttgcccaggcctggagtgcaacggcctgatctccgctcactgcaacctccgcctcccggcttcaagcagttctcctgcctcagcctcccgagtagctggga--ataggcgtgtgccaccacccccggc---taattttgtat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962042 154 - 181584905 agagtttctctcttgttgcccaggcctggagtgcaatagcccgatctcggctcactgcaacttcggcctcccgggttcaagcaattctcctgcctcagcctcccgagcagctgggattacaggcgtgcgccaccacgcccggc---taattttatat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58299 152 - 100774 ggagtttcgctcttgttgcccaggcctggagtgcaacggcctgatctccgctcactgcaacctccgcctcccggcttcaagcagttctcctgcctcagcctcccgagtagctggga--ataggcgtgcgccaccacccccggc---taattttgtat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16184776 154 + 16742782 ggagtttctctcttgttgcccaggcctggcttgcaatagcccgatctcggctcactgcaacctcggcctcccgggttcaagcaattctcctgcctcagcctcccgagcagctgggattacaggcgtgcgccaccacgcccggc---taattttgtat i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89531891 154 - 91010382 ggagtttctctcttgttgcccaggcttggagtgcaatagcccgatctcggctcactgcaacttcggcctcccgggttcaagcaattctcctgcctcagcctcccgcgcagctgggattacaggcgtgcgccaccacgcccggc---taattttgtat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6135346 154 + 6207128 ggagtttctctcttgttgcccaggcctggagtgcaatagcccgatctcggctcactgcaacctcggcctcccgggttcaagcaattctcctgcctcagcctcccgagcagctgggattacaggcgtgcgccaccacgcccggc---taattttgtat i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 177945 114 - 204313951 ggagtttcgctgtcgttgcccaggc-tggagtacaatggcgcgatctcggctcactacaacctcc--------------------------gcctcagtctccagagtagctgggattacgggcttgctc----------------taattttgtat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 139403 132 - 16417988 ggagtttcgctcttgctgcccaggc-tggagtgcaacggcgcgatctcggctcactgccacctccgcctcc--------agcgattctcctgcctcagtctccagagtggctgggatgacgggctcgcgc----------------taattttgtat i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 38131 1850 + 514179 M e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=275620.000000 s hg38.chr3_KI270779v1_alt 4925 83 + 205312 ttttagtagatactgggtt-tctccatattggccaggttggtctcgaactcctgacttcaggtgatccaccggcctcggcctcc s panTro5.chr3 541773 83 - 202621043 ttttagtagatactgggtt-tctccatattggccaggttggtcttgaactcccgacttcaggtgatccaccggcctcggcctcc i panTro5.chr3 C 0 C 0 s rheMac8.chr6 234993 82 + 180051392 atttagtagatacggggtt-tctccatattggtcaggctggtct-gaactcccgacttcaggtgatccaccggcctcgacctcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962196 83 - 181584905 ttttagtagatacgaggtt-tctcaatattggccaggctggtctcgaacccccgacttcaggtgatccaccggcctcggcctcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58451 83 - 100774 atttagtagatacggggtt-tctccatattggtcaggctggtctcgaactcccgacttcaggtgatccaccggcctcgacctcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16184930 82 + 16742782 ttttagtagatacgaggtt-tctcaatattggccaggctggtctcgaacccccgacttcaggtgatccacgggcct-ggcctcc i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532045 83 - 91010382 ttttagtagatacgaggtt-tctcaatattggccaggctggtctcgaacccccgacttcaggtgatccaccggcctcggcctcc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6135500 83 + 6207128 ttttagtagatacgaggtt-tctcaatattggccaggctggtctcgaacccccgacttcaggtgatccaccggcctcggcctcc i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 178059 84 - 204313951 ttttagcagagacaggggtgtctccatgttggtcaggctggtctcgaacatcccacctcaggtgatccgcccgcctcagcctcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 139535 83 - 16417988 ttttagcagagacggggttgtctccatgttggtcaggctggtctcgaacttccgacctccggtgatgcgcgcg-ctcagcctca i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 38131 1850 + 514179 M e nomLeu3.chr11 120767953 8 + 123690457 I e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=35350.000000 s hg38.chr3_KI270779v1_alt 5008 48 + 205312 caaagtgctgggattacacgcgtcagccaccgcacccggccTGCTTGC s panTro5.chr3 541856 46 - 202621043 caaagtgctgg-attacacgcgtcagccgccgcacc-ggccTGCtttt i panTro5.chr3 C 0 C 0 s rheMac8.chr6 235075 45 + 180051392 caaagtcctgggattacaggcgtcagacactgcgcacggccTGCt--- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 58534 48 - 100774 caaagtcctgggattacaggcgtcagacactgcgcacggccTGCtttt i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 178143 44 - 204313951 caaagtgctgagattacaggcgtgagccaccgcgcccggccTGC---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 139618 44 - 16417988 caaggttctgagatgacaggcgtgagcgcccgcgccgggcATGC---- i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135583 0 + 6207128 C e chlSab2.chr4 89532128 0 - 91010382 C e cerAty1.NW_012009470v1 16185012 0 + 16742782 C e macFas5.chr6 179962279 0 - 181584905 C e nomLeu3.chr11 120767953 8 + 123690457 I e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=98605.000000 s hg38.chr3_KI270779v1_alt 5056 72 + 205312 tttttt-----ttttttttttttt---------gcagagtctcgctgtccaccgggctggagctgcagtgatctcggctccctgcg s panTro5.chr3 541902 80 - 202621043 tttttt-----ttttttttttttttttttttttgcagagtctcgctgtccaccgggctggag-tgcagtgatctcggctccctgcg i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120767961 72 + 123690457 tttttt-----ttttttttttttt---------tcagagtctcgctgtccaccaggctggagttgccgtgatctcggctccctgca i nomLeu3.chr11 I 8 C 0 s rheMac8.chr6 235120 65 + 180051392 -----------ttttttttttttg---------gcagagtctggctgtccaccgggctggag-tgcagtgatctcggctccctgcg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 58582 75 - 100774 -tatttatttattttttttttttg---------gcagagtctggctgtccaccgggctggag-tgcagtgatctcggctccctgcg i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 178187 71 - 204313951 Attttt-----tttttcttttctg---------gcagagtctggcggtcgaccgggctggag-tgcagtgatctcggctccctgag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 139662 69 - 16417988 ATTTTT-----TTTCCCTTTTCTG---------GC--AGTCTGGCGGTCGGCCGGGCTGGAG-CGCAGTGACCTCGGCTCCCTGCG i saiBol1.JH378155 C 0 M 1514 e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135583 0 + 6207128 C e chlSab2.chr4 89532128 0 - 91010382 C e cerAty1.NW_012009470v1 16185012 0 + 16742782 C e macFas5.chr6 179962279 0 - 181584905 C e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=13479.000000 s hg38.chr3_KI270779v1_alt 5128 16 + 205312 gcctcgacctcccggg s panTro5.chr3 541982 16 - 202621043 gcctcgacctcccggg i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120768033 16 + 123690457 gcctccagctcccagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235185 16 + 180051392 gcctcgacttcccggg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 58657 16 - 100774 gcctcgacttcccggg i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 178258 14 - 204313951 gccccgactg--aggg i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135583 0 + 6207128 C e chlSab2.chr4 89532128 0 - 91010382 C e cerAty1.NW_012009470v1 16185012 0 + 16742782 C e macFas5.chr6 179962279 0 - 181584905 C e gorGor5.CYUI01015777v1 34501 3677 - 837792 I a score=261415.000000 s hg38.chr3_KI270779v1_alt 5144 159 + 205312 ctcaggcgatcctcccgcctcagcccacggagtacatgggaccacaggagc---ccaccacgcccgactacttgctgtaatttttgtagggatggggtctagccccgctgcccaggctggtccgcactgctgggctcaagagctccgcccgcctccgcctca s panTro5.chr3 541998 157 - 202621043 ctcaggcgatcctgccgcctcagcc-acggagtacatgggaccacaggagc---ccac-acgcccgactacttgctgtaatttttgtagggatggggtctagccacgctgcccaggctggtccgcactgctgggctcaagagctccgcccgcctccgcctcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38178 162 - 837792 ctcaagtgatcctcccgcctcagcccatggagtagatgggaccacaggagcgcgccaccacgcccgacTACTTGCtgtaatttttgtagggatggggtctagccacgctgcccaggctggtccgcactgctgggctcaagagctccgcccgcctccgcctcc i gorGor5.CYUI01015777v1 I 3677 C 0 s nomLeu3.chr11 120768049 162 + 123690457 ctcaggcgatcctgccgcctcagcccacggagtagatgggaccacaggagcccgccaccacgcccgactactttttgtaatttttgtagggatggggtctagccacgctgcccaggctggtcccaactgctgggctcaagagctccgcccgcctccaccttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235201 162 + 180051392 ctcaggcgatcctcccgcctctgcccatggagtagatgggaccacaggggcccgccaccacgcccgactattttctgcaatttttgtagggatggagtctggccacgctgcccaggctggtccgaactggtgggctcaggagctccgcccgcctccgcctcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 58673 162 - 100774 ctcaggcgatcctcccgcctctgcccatggagtagatgggaccacaggggcccgccaccacgcccgactattttctgcaatttttgtagggatggggtctggccacgctgcccaggctggtccgaactggtgggctcaggggctccgcccgcctccgcctcc i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 178272 161 - 204313951 ctcaggcgatcctcccgcctcagcccccggggcagctaggcccacaggagcccgccaccgcgcccggcggctt-ctgtaatttttgtagggatgaagtttcgccaagctgcccaggccgggccgaagtgctggactcaacagctccgcccgcctccgcctcc i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135583 0 + 6207128 C e chlSab2.chr4 89532128 0 - 91010382 C e cerAty1.NW_012009470v1 16185012 0 + 16742782 C e macFas5.chr6 179962279 0 - 181584905 C a score=486113.000000 s hg38.chr3_KI270779v1_alt 5303 114 + 205312 caaagcgcagggatcccaggtgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCGTGAATCATATTCACGTCAAAACTTCTTTTTATACAAGAACTAAAAGGCAAAC s panTro5.chr3 542155 114 - 202621043 caaagcgcagggatcacaggtgtgagctaccgcgccccgccCAGAGTTTCCCACTGTTAGCGTGAATCATATTCACGTCAAAACTTCTTTTTATACAAGAACTAAAAGGCAAAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38340 114 - 837792 caaagcgcagggatcacaggtgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCGTGAATCATATTCACGTCAAAACTTCTTTTTATACAAGAACTAAAAGGCAAAC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768211 114 + 123690457 caaagcgcagggatcacaggtgtgagctaccgcgtcccgccCAGAGTTTCCGACTGTTAGCGGGAATCATATTCACGTCAAAACTTCTCTTTATACACGAACTAAAAGGCAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235363 114 + 180051392 caaagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCCTGAATCACATTCACGTCAAAACTTCTTTTTATACATGAACTGAAAGGCTAAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962279 110 - 181584905 cacagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCCTGAATCACATTCACGTCAAAACTTCTTTCTATAAGAGAACTAAAAGG----C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58835 110 - 100774 caaagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCCTGAATCACATTCACGTCAAAACTTCTTTTTATACATGAACTGAAAGG----C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16185012 114 + 16742782 cacagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCCTGAATCACATTCACGTCAAAACTTCTTTCCATAAAAGAACTAAAAAGCAAAC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532128 114 - 91010382 cacagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTCTCGGACTGTTAGCCTGAATCCCATTCACGTCAAAACTTCTTTCTATAAAAGAACTAAAAGGCAAAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6135583 114 + 6207128 cacagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCCTGAATCACATTCACGTCAAAACTTCTTTCTATAAAAGAACTAAAAGGCAAAC i manLeu1.NW_012109696v1 C 0 M 975 s calJac3.chr2 178433 96 - 204313951 caaagcgccggga-----------------CGC-CCCCGCCCAGAGTTTTCGACTGTTAGTGTGAATCACGCTCGCGTCAAAACTTCTTTTTATACAAGAACTGAAAGGCAAAC i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M a score=207038.000000 s hg38.chr3_KI270779v1_alt 5417 63 + 205312 GAAATCCCTGCTCCATCACTGCCTGTCCCGGGTCGCGGCGCGGGACATTTCCTCCAAGCGCCT s panTro5.chr3 542269 63 - 202621043 TAAGTCCCTGCTCCATCACTGCCTGTCCCGGGTCGCGGCGCGGGACGTTTTCTCCAAGCGCCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38454 63 - 837792 TAAATCCCTGCTCCATCACTGCCTGTCCCGGGTCGCGGCGCGGGACATTTTCTCCAAGCGCCT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768325 63 + 123690457 TAAATCCCTGCTCCATCATTGCCTGTCCCGGGTCGCTGCGCAGGACATTTTCTCCAAGCGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235477 63 + 180051392 TAACTCCCTACTCCATCACTTCCCGTCCCGGGTCGCAGAGCCGGACATTTTCTCCAAGCGCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962389 63 - 181584905 TAAGTCCTTGCTCCATCACTTCCCGTCCCGGATCGCGGCGCGGGGCATTTTCCCCAAGCGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 58945 63 - 100774 TAACTCCCTACTCCATCACTTCCCGTCCCGGGTCGCAGAGCCGGACATTTTCTCCAAGCGCCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16185126 61 + 16742782 TAAGTCCTTGCTCCATCACTTCCCGTCCCGGATCGCGGCG--GGGCATTTTCCCCAAGCGCCT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532242 63 - 91010382 TAAGTCCTTGCTCCATCACTTCCCGTCCTGGGTCGCGGCGCGGGGCATTTTCCCCAAGCGCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 178529 63 - 204313951 TCGGACTCTGCTCCATCACTTCCAGTCCCGGGACTCGTCGCTGGACACTTCCTCCACGCGCCT i calJac3.chr2 C 0 I 97 e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=10197.000000 s hg38.chr3_KI270779v1_alt 5480 4 + 205312 TCCC s panTro5.chr3 542332 4 - 202621043 TCCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38517 4 - 837792 TCCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768388 4 + 123690457 TCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235540 4 + 180051392 TCCC i rheMac8.chr6 C 0 I 146 s macFas5.chr6 179962452 4 - 181584905 TCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59008 4 - 100774 TCCC i macNem1.NW_012013899v1 C 0 I 135 s cerAty1.NW_012009470v1 16185187 4 + 16742782 TCAC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532305 4 - 91010382 TCAC i chlSab2.chr4 C 0 C 0 e calJac3.chr2 178592 97 - 204313951 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=33451.000000 s hg38.chr3_KI270779v1_alt 5484 31 + 205312 GGCCCCGCGCGCAGGTGGCCTGCGCCGGAGG s panTro5.chr3 542336 30 - 202621043 G-CCCCGCGCGCAGGTGGCCCGCGCCGGAGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38521 30 - 837792 G-CCCCGCGCGCAGGTGGCCTGCGCCGGAGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768392 31 + 123690457 GGCCCCGCCCGCAGCTGGTCTGCGCGGGACG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962456 29 - 181584905 -GCACCGCGCCCAGGCGGCC-GCGCCGGAGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16185191 29 + 16742782 -GCACCGCGCCCAGGCGGCC-GCGCCGGAGC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532309 29 - 91010382 -GCACCGCGCCCAGGTGGCC-GCCCCGGAGC i chlSab2.chr4 C 0 C 0 e macNem1.NW_012013899v1 59012 135 - 100774 I e calJac3.chr2 178592 97 - 204313951 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e rheMac8.chr6 235544 146 + 180051392 I a score=21814.000000 s hg38.chr3_KI270779v1_alt 5515 10 + 205312 ATCCCGGACA s panTro5.chr3 542366 10 - 202621043 ATCCCGGACA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38551 10 - 837792 ATCCCGGACA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768423 10 + 123690457 ATCCCGGACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962485 10 - 181584905 ATCCCGCGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59147 10 - 100774 ATCCCGGACA i macNem1.NW_012013899v1 I 135 C 0 s cerAty1.NW_012009470v1 16185220 10 + 16742782 ATCCCGCGCA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532338 10 - 91010382 ATCCCGCGCA i chlSab2.chr4 C 0 C 0 e calJac3.chr2 178592 97 - 204313951 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e rheMac8.chr6 235544 146 + 180051392 I a score=-13184.000000 s hg38.chr3_KI270779v1_alt 5525 3 + 205312 -A-CG s panTro5.chr3 542376 3 - 202621043 -A-CG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38561 3 - 837792 -A-CG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768433 3 + 123690457 -A-CG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962495 2 - 181584905 -C-A- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 59157 3 - 100774 -CTA- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16185230 2 + 16742782 -C-A- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532348 2 - 91010382 -C-A- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 178689 3 - 204313951 TC-A- i calJac3.chr2 I 97 C 0 e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e rheMac8.chr6 235544 146 + 180051392 I a score=274859.000000 s hg38.chr3_KI270779v1_alt 5528 78 + 205312 CGCATTTCCTGCGCCCCCGGAAGCGGCGGTAACGCCTGGCCCTGCCCCC-GGCAGAGGCGGAAGCACAGTCGCTCT--GAG s panTro5.chr3 542379 78 - 202621043 CGCATTTCCTGCGCCCCCGGAAGCGGCGGTAACGCCAGGCCCTGCCCCC-GGCAGAGGCGGAAGTGGTGTCGCTCT--GAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38564 80 - 837792 CGCATTTCCTGCGCCCCCGGAAGTGGCGGTAACGCCAGGCCCTGCCCCC-GGCAGAGGCGGAAGCGCAGTCGCCCTGAGAG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768436 77 + 123690457 CACATTTCCTGCGCCC---GAAACGGCGGTAACGCCAGGCCCCGCCCCC-GACAGAGGCGGAAGCGGAGCCGCCCTGAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235690 78 + 180051392 CGCATTTCCTGCGCCCCCGGAAGTGGAGGTAACGCCAGGCCCTGCCCCT-GGCAGAGCCGGAAGCGGAGTCGCCCT--GAG i rheMac8.chr6 I 146 I 2 s macFas5.chr6 179962497 78 - 181584905 CGCATTTCCTGCGCCCCCGGAAGTGGCGGTAACGCCAGGCCCTGCCCCC-GGCAGAGGCGGAAGCGGAATCGCCTT--GAG i macFas5.chr6 C 0 I 2 s macNem1.NW_012013899v1 59160 78 - 100774 CGCATTTCCTGCGCCCCCGGAAGTGGAGGTAACGCCAGGCCCTGCCCCC-GGCAGAGCCGGAAGCGGAGTCGCCCT--GAG i macNem1.NW_012013899v1 C 0 I 3482 s cerAty1.NW_012009470v1 16185232 78 + 16742782 CCCATTTCCTGCGCCCCCGGAAGTGGCGGTAACGCCAGGCCCTGCCCCC-GGCAGAGGCGGAAGCGGAATCGCCTT--GAG i cerAty1.NW_012009470v1 C 0 I 2 s chlSab2.chr4 89532350 79 - 91010382 CGCATTTCCTGCGCCCCCGGAAGTGGCGGTAACGCCAGGCCCTGCCCCCTGGCAGAGGCGGAAGCGGAATCGCCTT--GAG i chlSab2.chr4 C 0 I 2 s calJac3.chr2 178692 77 - 204313951 CGCGTTTCCTGCGTCCCCGGAAGTGACGGT-ACGCCAAGTCCTGCCCCC-GGCAGACCCGGAAGCGGAGTCGCCCT--GAG i calJac3.chr2 C 0 I 2 e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=185076.000000 s hg38.chr3_KI270779v1_alt 5606 71 + 205312 GTCGCCCGTGGCCGCAGGTGCCTCAGCCCAGCCGCGCG-------CCTTGGCCCTTGGCCGCCTACTCCTACCGCCCC s panTro5.chr3 542457 71 - 202621043 GTCGCCAGTCGCCGCACGTGCCTCAGCCCAGCGGCGCG-------CCTTGGCCCTTGGCCGCCTACTCCTACCGCCCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38644 71 - 837792 GTCTCCCGCGGCCGCAGGTGCCTCAGCCCAGCCGCGCG-------CCTTGGCCCTTGGCCGCCTACTCCTACCGCCCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768513 71 + 123690457 GTCTCCCGTTGCCGCAGGCGCCTCAGCCCAGCCGCGCG-------CCTCAGCCCTTGGCCGCATACTCCTACCGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235770 71 + 180051392 GTCTCACGTCTCAGTAGGAGCCTCAGCCCAGCCGCGCG-------CCTTGGCCCATGGCCGCCTACTCCTACCGCCCC i rheMac8.chr6 I 2 C 0 s macFas5.chr6 179962577 78 - 181584905 ATCTCCCGTCGCCGCAGGCGCCTCAGCCCGGCCGCGCGCCTTCGCCCTTGGCCCTTGGCCGCCTGCCCCTACCGCTCC i macFas5.chr6 I 2 C 0 s cerAty1.NW_012009470v1 16185312 71 + 16742782 ATCTCCCGTCGCCGCAGGCGCCTCAGCCCGGCCGCGCG-------CCTTGGCCCTTGGCCGCCTGCTCCTACCGCTCC i cerAty1.NW_012009470v1 I 2 I 9 s chlSab2.chr4 89532431 78 - 91010382 ATCTCCGGTCGCCGGAGGCGCCTCAGCCCGGCCGCGCGCCTTGGCCCTTGGCCCTTGGCCGCCTGCTCCTACCACTCC i chlSab2.chr4 I 2 C 0 s calJac3.chr2 178771 71 - 204313951 TTCTCCCTTAGCCGCCCGCGCCTCAGCCCAGACGCGCG-------CATCGGCTCATGGCCGCCTACTCCTAccgcccc i calJac3.chr2 I 2 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=-6799.000000 s hg38.chr3_KI270779v1_alt 5677 10 + 205312 GGCCTTGGG--C s panTro5.chr3 542528 9 - 202621043 AGCCCCGG---C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38715 10 - 837792 GGCCCTGGG--C i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768584 6 + 123690457 GGCCCC------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235841 10 + 180051392 GGCCCCGGGG-- i rheMac8.chr6 C 0 I 2 s macFas5.chr6 179962655 2 - 181584905 GG---------- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89532509 2 - 91010382 GG---------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 178842 12 - 204313951 ggccccggggcc i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e cerAty1.NW_012009470v1 16185383 9 + 16742782 I a score=190570.000000 s hg38.chr3_KI270779v1_alt 5687 101 + 205312 GGCCCTGGGCCTGCTG-------------CGGGCGCG----------GCGCTGCCCGACCAGAGCTTCCTGTGGAACGTCTTC-CAGAGCTGCCAC-----------CTGGCACCGCCCCGGCACCTCCCGCCTCC------- s panTro5.chr3 542537 98 - 202621043 GGCCCTGGGCCTGCTG--------------GGGC-CG----------GCGCTGCCCGACCAGAGCTTCCTGTGGAACGTATTCTCAGAGGTGCC-------------CTGGCACCGCCCCGGCACCTCCCGCCTCC------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38725 101 - 837792 GGCCCGGGGCTTGCTG-------------CGGGCGGG----------GCGCTGCCCGACCACAGCTTCCTGTGGAACGTCTTC-CAGAGCTGCGAC-----------CTGGCACCGCCCCGGCACCTCCCGCCTCC------- i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768590 84 + 123690457 ------------------------------GGGCAGG----------GCGCTGCCAGAACAGAGCTTCCTGTGGAACGTCTTC-CAGAGGTGCCGG-----------CTGGCACTGCCCCCGCACCCCCCGCCTCC------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235853 101 + 180051392 GGCCCAGGGCCTGCTG-------------CGGGCGCG----------GCGCTGCCGGACCAGAGCTTTCTGTGGAACGTCTTC-CAGAGGTGCGGC-----------CTGGCACCGCCCCAGCACCTCCCGCCTCC------- i rheMac8.chr6 I 2 C 0 s macFas5.chr6 179962657 94 - 181584905 ------GGGCTTGCTG-------------CGGGCGCG----------GCGCTGCCGGGCCAGTGC-TTCTGTGGAATGTCTTC-CAGAGGTGCGGC-----------CTGGCCCCGCCCGGGCACCTCCCGCCTCC------- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16185392 100 + 16742782 GGCCCTGGGCTTGCTG-------------CGGGCGCG----------GCGCTGCCGGGCCAGTGC-TTCTGTGGAACGTCTTC-CAGAGGTGCGGC-----------CTGGCACCGCCCCAGCACCTCCCGCCTCC------- i cerAty1.NW_012009470v1 I 9 I 11 s chlSab2.chr4 89532511 94 - 91010382 ------GGGCTTGCTT-------------TGGGCGCG----------GCGCTGCCGGGCCAGTGC-TTCTGTGGAATGTCTTC-CAGAGGTGCGGC-----------CTGGCACCGCCCGGGCACCTCCCGCCTCC------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 178854 139 - 204313951 ggccccggcccAGTGGGATCCCCGGGTACCGAGCTCGNNNNNNNNNNGCGCTGCCGGACCAGAGC-TCCTGT-GAACGTCTTC-CAGAG-TGCGGCTGCACGCCTCACTCGCTCGCTCTGCGCGGCGCCCGGATCCTGCCCGA i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=10530.000000 s hg38.chr3_KI270779v1_alt 5788 10 + 205312 CCCGCAGCTG s panTro5.chr3 542635 10 - 202621043 CCCGCAGCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38826 10 - 837792 GCCGCAGCCG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768674 10 + 123690457 GCCGCAGCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235954 10 + 180051392 GCTGCGGCCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962751 10 - 181584905 GCGGCGACCG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89532605 5 - 91010382 ---GCGGC-- i chlSab2.chr4 C 0 I 4 s calJac3.chr2 178993 10 - 204313951 CCCGCGGCAG i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e cerAty1.NW_012009470v1 16185492 11 + 16742782 I a score=-11250.000000 s hg38.chr3_KI270779v1_alt 5798 46 + 205312 CCCCGGACCCGTGTCCC---------------------------------------------------------------------------------------------------GACCCCCG---CGGCCAACCCCGTTCC------CTGC------------------------------C s panTro5.chr3 542645 43 - 202621043 CCCCGGACCCGTGTCCC---------------------------------------------------------------------------------------------------GACCCCCG---CGGCCA--CCCGTTCC------CTGC------------------------------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38836 108 - 837792 CCCCCGACCCCTGCCCCGACCCACGCGGCCG------ACCCCGACCCCTGCCGGGTCCCCAGCGGCCTCCCCCGTCCCCTGC--------------------------CCT-----GACCCCCG---CGGCCGACCCCGACCC------CTGC------------------------------C i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768684 168 + 123690457 CCCCCTGCCCCGAACCC-------GCGGCCGACCCCAACCCCGACCCCTGCCCCAACCGCCGCGGCCGCCCCCGTTCCCTGACGGTTTCCCCGCGGCCTCACCCATCACCTGCCGGGTCCCCAG---CGGCCGCCCCCGACCC------CTGCCCCGACTGACGCGGCTGCCGCGTTCCCAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 235964 43 + 180051392 ------------CCCCC---------------------------------------------------------------------------------------------------GACTCCTGCCCCCACCGCCGCGGACCCGGTTCACTGC------------------------------C i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89532614 34 - 91010382 ------------GCCCC---------------------------------------------------------------------------------------------------GACCCCCG---CGGCCGCCCCCGACCC------CTGC------------------------------C i chlSab2.chr4 I 4 I 9 s calJac3.chr2 179003 44 - 204313951 --CCGCAGTCCCGTGCC---------------------------------------------------------------------------------------------------GGGCCCTG---CGTCATCATCCGTCCC------TTGC------------------------------C i calJac3.chr2 C 0 I 2 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e cerAty1.NW_012009470v1 16185492 11 + 16742782 I e macFas5.chr6 179962761 0 - 181584905 C a score=4730.000000 s hg38.chr3_KI270779v1_alt 5844 9 + 205312 GGTTGCCCC s panTro5.chr3 542688 8 - 202621043 GGTTGCCC- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38944 9 - 837792 GGTTGCCCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768852 9 + 123690457 GGTTGCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 236007 9 + 180051392 GGTTCCCCC i rheMac8.chr6 C 0 C 0 s calJac3.chr2 179049 7 - 204313951 GATTCTC-- i calJac3.chr2 I 2 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e chlSab2.chr4 89532648 9 - 91010382 I e cerAty1.NW_012009470v1 16185492 11 + 16742782 I e macFas5.chr6 179962761 0 - 181584905 C a score=112975.000000 s hg38.chr3_KI270779v1_alt 5853 96 + 205312 GCGGCCTCCCCCGTCACCTGCCGGGTCCCCAGCGGCCTCCCCCGTCCCCTGCCCCGACCTCCGCCGTCTCCCCCG-CCCCTGCCCGGACCCC-------------------------CGCGG s panTro5.chr3 542696 112 - 202621043 GCCGCCTCCCC-GTTCCCTGCCATGTCCCC---GGCCTCCCCCGTCCC-TGCCC-GACCGCCGCGCTC---CCCG-ACCCTGCCCCGACCCCGCGGCCGCCCCACCCCTCCCGACCGCGCGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 38953 97 - 837792 GCGGCCTCCCCCGTCACCTGCCGGGTCCCCAGCGGCCTCCCCCGTCCCCTGCCCCGACCTCCGCCGCCTCCCCCGACCCCTGCCCCGACCCA-------------------------CGCGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768861 97 + 123690457 GTGGCCTCCCCCGTCACCTGCCGGGTCCCCAGCGGCCTCCCCCGTTCCCTGCCCCGACCGCCACCGCCTCCCCCGTACCGTGCCCGGACTTC-------------------------CGCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 236016 97 + 180051392 GCGGCCTCCTCTGTCCCCTGTCGGGTCCCCCGCGGCCTCCCCAGTCCCCTGCCCCGACCGCCGCGGCCTCCCCCGTCCCCTGCCCCGACCCC-------------------------TGCGG i rheMac8.chr6 C 0 I 5541 s chlSab2.chr4 89532657 97 - 91010382 GCGGCCTCCCCCGTCCCCTGCCCCGACCCCCGCGGCCGCCCCCGACCCCTGCCCCGACTGTCGCGGCCTCCCCCGTCCCCTGCCCCGACCCC-------------------------CGCGG i chlSab2.chr4 I 9 C 0 s calJac3.chr2 179056 97 - 204313951 GCGGCAGTCCCCGTTCGCTGCCGGGTcccctgcgtcctcccccgtcccttgccccgactcccgcggccgcccccgttcgctgccgggttccc-------------------------tgcgt i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e cerAty1.NW_012009470v1 16185492 11 + 16742782 I e macFas5.chr6 179962761 0 - 181584905 C a score=5489.000000 s hg38.chr3_KI270779v1_alt 5949 16 + 205312 GCGCCCCCGAACCCTA s panTro5.chr3 542808 14 - 202621043 CCGCCCCC-ATCCCT- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39050 16 - 837792 CCGACCCCGACCCCTG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768958 8 + 123690457 CCGCCCCC-------- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 89532754 16 - 91010382 CCGCCCCCGACCCCTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 179153 16 - 204313951 cctcctccgtcccttg i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M e cerAty1.NW_012009470v1 16185492 11 + 16742782 I e macFas5.chr6 179962761 0 - 181584905 C e rheMac8.chr6 236113 5541 + 180051392 I a score=44837.000000 s hg38.chr3_KI270779v1_alt 5965 49 + 205312 CCCCGACCGACGCGGCCGCCCCCATCCCCTGCCC----------------------------CGACCCCCGCGGCCG s panTro5.chr3 542822 74 - 202621043 CCCCG-CCGACGCGGCCGCCCC-ATCCCCTGCCC-GACCCCGCAGCCGCCCCGACCCCTTCCCGACCGCCGCGGCCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39066 76 - 837792 CCGGGTCCCCAGCGGCCTCCCCCGTCCCCTGCCCGGACCCCGCGGCCGCCCCGACCCCTACCCCGACGCCG-GGCCG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768966 26 + 123690457 -----------------------GACCCCTGCCC----------------------------CGACCCCCGCGGCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 241654 49 + 180051392 ccccgacccccgcggccgcccccgtccccggccc----------------------------cgaccgacgcggccg i rheMac8.chr6 I 5541 C 0 s macFas5.chr6 179962761 48 - 181584905 CCCCGACCCCCGCGGCCGCCCCCGTCCCT-GCCC----------------------------CGACCGACGCGGCCG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16185503 49 + 16742782 CCCCGACCCCCGCGGCCGCCCCCGTCCCCTGCCC----------------------------GGTCCCTTGCGGTCT i cerAty1.NW_012009470v1 I 11 C 0 s chlSab2.chr4 89532770 22 - 91010382 CCCCGACC-------------------------------------------------------GACGGACGCGGCCG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 179169 49 - 204313951 ccccgaccctcgcgtccgcccccgtcccctgccc----------------------------tgacttccgtggcca i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e colAng1.NW_012118799v1 38131 1850 + 514179 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=45486.000000 s hg38.chr3_KI270779v1_alt 6014 19 + 205312 CCCCCATCCCCTTCCGGGT s panTro5.chr3 542896 17 - 202621043 CCCCCATCCCCTTCCGG-- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39142 19 - 837792 CCCCCATCCCCTGCCGGGT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120768992 19 + 123690457 CCCCCATCCCCTGCCAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 241703 19 + 180051392 cccccgtcccctgcccggt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962809 19 - 181584905 CTCCCGTCCCCTGCCCGGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16185552 18 + 16742782 CCCCCGTCCCCTG-TGGGT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532792 19 - 91010382 CGCCCGTCCCCTGCCGGGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 40000 19 + 514179 CCCCCGTCCCCTGCCGGGT i colAng1.NW_012118799v1 M 1850 C 0 s calJac3.chr2 179218 12 - 204313951 accccgtctcct------- i calJac3.chr2 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e saiBol1.JH378155 139731 1514 - 16417988 M e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=27073.000000 s hg38.chr3_KI270779v1_alt 6033 8 + 205312 CCCCCGCG s panTro5.chr3 542913 8 - 202621043 TCCCCGCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39161 8 - 837792 CCCCCCCG i gorGor5.CYUI01015777v1 C 0 I 2 s nomLeu3.chr11 120769011 8 + 123690457 CCCTCGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 241722 8 + 180051392 cccctgcg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962828 8 - 181584905 CCCCTGCG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16185570 8 + 16742782 CCCCTGCG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532811 8 - 91010382 CCCCTGCG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 40019 8 + 514179 CCCCCGCG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 141249 8 - 16417988 cccctgcg i saiBol1.JH378155 M 1514 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e calJac3.chr2 179230 0 - 204313951 C e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=203038.000000 s hg38.chr3_KI270779v1_alt 6041 55 + 205312 GTCTCCCCCGTCCGCTGCCCGGTCTCCTGGGGCCGCCCCTGCCTCCTGCCCGGTC s panTro5.chr3 542921 51 - 202621043 GTCTCCCCCGTCC-CTGCCCGGTCTCCTGTGGCCGCCCCTGCCT--TGCC-GGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 483984 55 - 205426864 GTCTCccccgtccgctgcccggtctcctgtggccgcccctgccttctgcccggtc i panPan2.chr3 N 0 C 0 s gorGor5.CYUI01015777v1 39171 55 - 837792 GTCTCCCCCGTCCCCTGCCCGGTCTCCTGTGGCCGCCCCTGCCTCCTGCCGGGTC i gorGor5.CYUI01015777v1 I 2 C 0 s nomLeu3.chr11 120769019 55 + 123690457 GTCTCCCCCGTCCCCTGCCCGGTCTCCTGTGGCTGCCCCTGCCTCCTGCCCGGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 241730 43 + 180051392 gtctcccccgtcccctat------------ggccgcccccgcctcctgcccggtc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962836 43 - 181584905 GTCTCCCCCGTCCCCTGT------------GGCCGCCCCCGCCTCCTGCCCGGTC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16185578 54 + 16742782 GTCGCCCCCGTCCCCTGT-GGGTCTCCCGCGGCCGCCCCCGCCCCCTGCCCCGTC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532819 54 - 91010382 GTCTCCCCCGCCCCCTGT-GGGCCCCCTGTGGCCGCCCCCGCCTCCTGCCCGGTC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 40027 54 + 514179 GTCTCCCCCGTGCCCTGT-GGGTCTGCTGTGGCCGCCCCCGCCTCCTGCCCGGTC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 179230 39 - 204313951 ----------------gcggcgaccctcgtggccgcccccgcctcctgcccGGTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 141257 55 - 16417988 tcctcccccgtcccttgccccgacccccgcggccgcccccgcctccTGTCCGGTC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 59238 3482 - 100774 I e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=912377.000000 s hg38.chr3_KI270779v1_alt 6096 174 + 205312 CCTGTCCTGTGCGTCGGGCGCTTCCCAAGGTGCAGAGGGC-GCCACTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCTGGGCCAGGCCCCGTTTCTCGCCTC--GAGCCGTC-GGGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACTGTCTGGGCCGCTG-TTAAA-A s panTro5.chr3 542972 174 - 202621043 CCTGTCCTGTGCGTCGGGCCCTTCC-AAGGTGCAGAGGGC-GCCACTGCAGA-CCCGAGGTC-GCGGC-ACCGGCTCCTGGGCCAGGCCCTTTTTCTCGCCTCAAGAGCCGTC-AAGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACTGTCTGGGCCGCTG-TTAAA-A i panTro5.chr3 C 0 C 0 s panPan2.chr3 484039 174 - 205426864 cctgtcctgtGCGTCGGGCCCTTCCCAAGGTGCAGAGGGC-GCCACTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCTGGGCCAGGCCCTTTTTCTCTCCTC--GAGCCGTC-GGGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACTGTCTGGGCCGCTG-TTAAA-A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39226 174 - 837792 CCTGTCCTGTGCGTCGGGCCCTTCCCAAGGTGCAGACTGC-GCCACTGCAGA-CCCGAGGTC-GCGGCCACCGGC-CCTAGGCCAGGCCCTGTTTCTCGCCTC--CAGGCGTCAGGGGGAGCGTCTCCA-GGGCGCTTGTTTGGGGAAAGCGGAAATAGACTGTCTGGGCCGCTG-TTAAA-A i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120769074 178 + 123690457 CCTGTCCTGTGCGTCAGGCCCTTCCTAAGGTGCAGAGTGCAGCCACTGCAGA-CCCGATGTC-GTGGCCACCGGCTCCTGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCAGGGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACCGCCTGGGCCGCTG-TTAAA-A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 241773 175 + 180051392 cctgcccTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCCGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGCGGAGGGTCTCCAGGGGTGCTTGTTCGGGGAAAGCAGAGACAGAATGTCTGGG-CGCTG-TTAAG-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179962879 175 - 181584905 CCTGCCCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCCGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGCGGAGGGTCTCCAGGGGTGCTTGTTCGGGGAAAGCAGAGACAGAATGTCTGGG-CGCTG-TTAAG-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 62720 172 - 100774 CCTGCCCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGACCCCGAGGTCGGCGGCCACCGG-TCCCGGGCTAG--CCTTTTTCTCGCCTCAGGAGCCGCCGGGCGGAGGGTCTCCTAGGGTG-TTGTTCGGGGAAAGCAGAGAC--AATGTCTGGG-CGCTGTTTAAG-- i macNem1.NW_012013899v1 I 3482 C 0 s cerAty1.NW_012009470v1 16185632 175 + 16742782 CTTGCCCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGAA--GCCGCTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCCGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGCGGAGGGTCTCCGGGGGTGCTTGTTCGGGGAAAGCAGAGACAGACTGTCTGGG-CGCTG-TTAAG-- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89532873 175 - 91010382 CCTGTCCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCTGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGTGGAGGGTCTCCAGGGGTGCTTGTTCGGGGAAAGCGGAAACGGACTGCCTGGG-CGCTG-TTAAG-- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 40081 177 + 514179 CCTGTGCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTGC-GCCGCTGCAGA-CCCGAGGTC-GCGGCCACCGGCTCCTGGGCTAGGCCCTTTTTCTCGCCTCAAGAGCCGCCAGGTGGAGGGTCTGCAGGGGTGCGTGTTCGGGGAAAGCGGAAACAGACTGCCTGGG-CGCTG-TTGAAG- i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 179269 177 - 204313951 CCTGGCCCGTGCCTCGGGCCCTTATCGAGGTGCAGAGTCT-GCCACTGCAGC-CCCGAGGTC-GCGGCCCCAGGCTTCTGGGCTAGGCCCGTTTTCTCGCCCCGAGAGCAGCCAGGTCGAGGGTCTCCGGGGGTGCCTGTTTGGGGAAAGCAGAAGCAGACTGCCTGGG-CGCTG-TTAAA-A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 141312 176 - 16417988 CCTGGCTCGTGCCTCGGGTCCTTCCC-AGGTGCACAGTCC-ACCACTGCAGC-CCCGAGGTG-GCGGCCCCAGGCTTCTGGGCTAGGCCCTTTTTCTCGCCCCGAGAGCCGCCAGGTGGAGGGTCCCCGGGGGTGCTGGGTTGGGGAAAGCAGAAGCAGACTGCCTGGG-CGCTG-TTAAA-A i saiBol1.JH378155 C 0 C 0 e manLeu1.NW_012109696v1 6135697 975 + 6207128 M a score=3589466.000000 s hg38.chr3_KI270779v1_alt 6270 564 + 205312 TGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGCTCGGGCCAGGTGACCTTTATGGCGGCG--CCTTCTGTCCCTGGTCGCTTTTCCACTG-AATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGA--GGGAATCTTGTCTTGT-CTGTGA-AAAAGGGAAACTGGTGCAAATGG-GAATTCAGACAGGTCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAAAGAGAGAGAAAGATGATTGTCCTCTTAGGGGAAGAACACACTTGGACG-T-GGCTCCTGGGGCACTTCCTTGATTCCGCTGTACTCCTCA--------GCGGGACCGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTGTTTGGTCTTCTTGATGTTATAGGGTTGATAGAG--AGGAGTGGAGTGATATCGGACACCCAGCTTCAGCAAGCTCTCTCCAAG-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGGTCTCCGGACCAAGAAGCCGC s panTro5.chr3 543146 556 - 202621043 TGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGCTCGGGCCAGGTGACCTT-ATGGCGGCG--CCTTTTGTCC-TGGTCGCTTTTCCACTG-AATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGA--GGGAATCTTGTCTTGT-CTGTGATGAAAAGGAAACTGGTGCAAATGA--AATTCAGACagg-caggaggg-aaggaagg-aaggaTTGAGGTGGGAAAAGAGAGAGAAAGATGATTGTCCTCTTAGGGGAAGACCACACT-GGACG-TCGGCTCCTGGGGCACTTCCTCGATTCCCCTGTACTC---A--------GCGGGACGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTGTTTGGTCTTCTTGATGTTATAGGGTTGATAGAG--AGGAGTGGAGTGATATCGGACACCCAGCTTCAGCAAGCTGTCTCCAAG-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGGCCTCGGGACCAAGAAGCCGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 484213 564 - 205426864 TGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGCTCGGGCCAGGTGACCTTTATGGCGGCG--CCTTTTGTCCCTGGTCGCTTTTCCACTG-AATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGA--GGGAATCTTGTCTTGT-CTGTGA-AAAAGGGAAGCTGGTGCAAATGC-GAATTCAGACAGGCCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAAAGAGAGAGAAAGATGATTGTCCTCTTAGGGGAAGACCACACT-GGACG-TCGGCTCCTGGGGCACTTCCTCGATTCCCCTGTACTCCTCA--------GCGGGACGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTATTTGGTCTTCTTGATGTTATAGGGTTGATAGAG--AGGAGTGGAGTGATATCGGACACCCAGCTTCAGCAAGCTCTCTCCAAG-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGGCCTCGGGACCAAGAAGCCGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39400 566 - 837792 TGGCAGCAGCCAAGGAAGAAGCAGCGACCTGGAGTCTGGTCGGGCCAAGTGACCTTTATGGCGGCG--CCTTCTGTCCCTGGTCGCTTTTCCACTG-AATGAATGGCCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGA--GGGAATCTTTTCTTGT-TTGTGA-GAAAGGGAAGCTGGTGCAAATGGCGAATTCAGACAGGCCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAAAGAGAGGGAAAGATGATTGGCCTCTTAGGGGAAGACCACACTTGGACG-T-GGCTCCTGGGACACTTCCTCGATTCCCCTGTACTCCTCA--------GCGGGACGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTCTGCTTTTCCTGAACTTTCGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACGCCGAGCTTCAGCAAGCTGTCTCCAAC-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGGCCTC-GGACCAAGAAGCCGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120769252 559 + 123690457 TGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGGTTGGGCCAAGTGACCTTTATGGGGGTG--CCTTCTGTCCCTGGTCGCTTTTCCACTG-AATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTA-TTATCTGA--GGGAATCTTTTCTTGT-TTGTGA-AAAAGGGAAACTGGTACAAATGC-GAATTCAGACAGGCCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAAAGAGA--GAAAGATGATTGACCTCTTAGGGGAAGACCACACTTGGACG-TCGGCTCCTGGGGCACTTCCTTGATTCCCCTGCACTCCTCA--------GCGGGATGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTATTTGG---TCTTGATGTTGTAGGGTTGATAAAGACAGCAGTGGAGTGATAT-GGACACCGAGCTT-AGCAAGCTGTCTCCAAC-CGTGAGT------------------------------------------GGGCCAATGGGACCTGGGCCTCCAGACCGAGAAGCCGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 241948 592 + 180051392 TGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTCCGGCGGCG--CCTTCTGTCCC-GGTCGCTTTTCCACGG-AATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTATCTGA--GGGAA-----TCTTGT-GTGTGA-AAAAGGGAAACTGGTGCAAATGT-GAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATT------------GAGAGAGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACG-TGGGCTCCTGCGGCACTTCCTTGATTCCCGTGTCCTCCTCA--------GCGGGATGGGGGAGGCGGAGGTTCCAGGAGGCTCCGAGCCTTCCAGAGTCAGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTACTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGCTTCAGCAAGCTCTCTCCAAC-GGTGAGTGGGCCCGTGGGTCCTGGGTCCGGACCCAGAAGCCGCTGAGT-GGGCCCGTGGGACCTGGG--TCCGGACCCAGAAGCCGC i rheMac8.chr6 C 0 I 34 s macFas5.chr6 179963054 592 - 181584905 TGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTCCGGCGGCG--CCTTCTGTCCC-GGTCGCTTTTCCACGG-AATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTACCTGA--GGGAA-----TCTTGT-TTGTGA-AAAAGGGAAACTGGTGCAAATGT-GAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATT------------GAGAGAGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACG-TGGGCTCCTGCGGCACTTCCTTGATTCCCGTGTCCTCCTCA--------GCGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGAGCCTTCCAGAGTCAGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTACTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGCTTCAGCAAGCTCTCTCCAAC-GGTGAGTGGGCCCGTGGGACCTGGGTCCGGACCCAGAAGCCGCTGAGT-GGGCCCGTGGGACCTGGG--TCCGGACCCAGAAGCCGC i macFas5.chr6 C 0 I 34 s macNem1.NW_012013899v1 62892 580 - 100774 TGTCAGCAGCCGAGGAAGCAGCG--GACCTGGCGTCTGCTC-GGGCAGGTGACCTTTCCGGCGGCGCTCTTCTTGTCCC-GGTCGCTTTTCCACGGAAATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTATCTGGATGGGAA-----TCTTGTGCTGTGA-AAA--GGGAACTGGT-CAAATGT-GAATTCAGACAGGCCAGGAGAGGAAGGAA-GGAAGGATT------------GAGAGAGAAAGATGTTTGG-CTCTTGGGGGAAGACCCCGCTTGGACGTTGGGCTCCTGCGGCACTTCCTTGATTCCCGT-TCCTCCTCA--------GCGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGA-CCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTACTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGATCTTCAGCAAGCTCTCTCCAACGGGTGAGT---------GGACCTGGGGTCCGACCCAGAAGCCGCTGAGTGGGGCCCGTGGGA-CTGGG--T-CGGACCCAGAAGCCGC i macNem1.NW_012013899v1 C 0 I 35 s cerAty1.NW_012009470v1 16185807 552 + 16742782 TGTCAGCAGCCAAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTCCGGCGGCG--CCTTCTGTCCCGGGTCGCTTTTCCACGG-AATGAATGACCGAAACTGTAGTGACTCCTGGCCAGGGAATGCCTTAGTTATCTGA--GGGAA-----TCTTGT-TTGTGA-AAAAGGGAAACTGGTGCAAATGT-GAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATT------------GAGAGGGAAAGATGATGGGCCTCTTAGGGGAAGACCCCGCTTGGACG-TGGGCTCCTGGGGCACTTCCTTGATTCCCGTGTCCTCCTCA--------GCGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATCTCGGACACCGAGCTTCAGCAAGCTCTCTCCAAC-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGG--TCCGGACCGAGAAGCCGC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89533048 547 - 91010382 TGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTAC-GCGGCG--CCTTCTGTCCCGGGTCGCTTTTCCACGG-AATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTATCTGA--AGGAATCTTTTCTTGT-TTGTGA-AAAAGGGAAACTGGTGCAAATGT-GAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATT--------------GAGAGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACG-TGGGCTCCGGGGGCACTTCCTTGATTCCCGTGTCCTCCTCA--------GCGGGATGGGAGAGGCGGGGGTTCCCGGAGGCTCCGAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGCTTCAGCAAGCTCTCTCCAAC-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGG--TCCGGATCCAG------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6136683 545 + 6207128 TGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTCCGGCGGCG--CCTTCTGTCCCGGGTCGCTTTTCCACGG-AATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTATCTGA--GGGAA-----TCTTGT-TTGTGA-AAAAGGGAAACTGGTGCAAATGT-GAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATT------------GAGAGAGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACG-TGGGCTCCTGCGGCACTTCCTTGATTCGCGTGTCCTCCTCA--------GCGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGCTTGTTTTGCTTTTCCTGAACTTTGGCTCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATCTCGGACACCGAGCTTCAGCAAGCTCTCTCCAAC-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGG--TCGGGACCCAG------- i manLeu1.NW_012109696v1 M 975 C 0 s colAng1.NW_012118799v1 40258 552 + 514179 TGTCAGCAGCCAAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTACGGCGGCG--CCTTCTGTCCCGGGTCGCTTTTCCACTG-AATGAATGACCGAAACTGTAATGACTCGTGGCCAGGGAATGCCTTAGTTATCTGA--GGGAA-----TCTTGT-TTGTGA-AAAAGGGAAACTGGTGCAAATGT-GAATTCAGACAGGCTAGGAGAAGAAGGAAGGGAAGGATT------------GAGAGAGAAAGATGATTGGCCTCTTAGGGGAAGACCACGCTTGGACG-TGGGCTCCTGGGGCACTTCCTTGATTCCCCTGCCCTCCTCG--------GTGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGATCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGCTTCAGCAAGCTCTCTCCAAC-GGTGAGT------------------------------------------GGGCCAGTGGGACCTGGG--TCCGGACCGAGAAGCCGC i colAng1.NW_012118799v1 C 0 I 211 s calJac3.chr2 179446 530 - 204313951 TGCCGGCAGCCGAGGAAGAAGCTGAGATCTGGCGTCTGCTTGGGGCAGGTGACCTTTACGACGGCG--ACT-CTGTCCCTGGTCTCTTTTCCACTG-AT----TGACCGAAAC--TAGTGACTCATGGCCAGGGAATGGCTCAGTTGTCTGA----GAA--TTTTTTTGT-CTATGA-AATAGGGAAAGTGGTGGAGGTGT-GAATTCAGATATGCCAGGAGAGGAAGGAAGCGAAGGACCGAG--------------------------GATCTCTTAGGGGAAGACCACGCTTGCGCT-TCGGCCCCTGGGGCACTTCCTTTATCCCCG-GTTCTCCTCCC-------GCAGGATGGAAGAGGCGGAGGTTCCAGGACG----GAGCCTTCCAGACTCAGTGCAGGGCTGACAGGAGACGTTCGTTTTGCTTTTTCTGCGCTTTGGATCGTCAGCTCATTTGGTCTTTTTGATGTCATAGGGTTGATAAAGACAGAAGTGGAGTGATATCGGACAGCGAGCTTCAGCAAGCACTCTCCAAC-GGTGAGT------------------------------------------GGGCCAGTGGGGCCTGGGCCTGCGAACCTAGAAGCCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 141488 560 - 16417988 TGCCGGCAGCCACGGAAGAAGCTGCGATCTGGCGTCTGCTCGGGGCAGGTGACCTTTACGACGGCG--ACT-CTGTCCCTGGCCTCTTTTCCGCTG-ATGGAATGATCGAAACTGTAGTGACTCATGGTCAGGGAATGGCTCAGTTGTCTGA----GAA--TTTTTTTGT-GTGTGA-AATAGGGAAAGTGGTGGAGGCGT-GAATTCAAATAGGCCGGGAGAGGAAGGAGGGGAAGGACTGAGGTGCGGAAAGAGA---AGAGATGAC-GGCCTCTTAGCGGGAGACCACGCTTGCACT-GCGGCTCCC-GGGCCCGTCCTTCATCCCCC-GTACTGATCCCATCCTCAGCAGGATGGGAGAGGCGGGGGTTCCAGGAGG----GAGCCTTCAGATCTCCGCGCAGGGCTGACAGGAGACGTTCGTTTTGCTCTTTCTGCAGTTTGGATCGCCAGCTTATTTGGTCTTTTTGATGTCGTAGGGTTGATAAAGACAGAAGTGGAGTGATATCGGACAGCGAGCTTCAGCAAGCACTCTCCAAT-GGTGAGT------------------------------------------GGGCCAGTG----CTCGGCCTCCGGACCCAGAAGCCGC i saiBol1.JH378155 C 0 C 0 a score=31396.000000 s hg38.chr3_KI270779v1_alt 6834 5 + 205312 GAGCC s panTro5.chr3 543702 5 - 202621043 GAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 484777 5 - 205426864 GAGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39966 5 - 837792 GAGTC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120769811 5 + 123690457 GAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 242574 5 + 180051392 AAGCC i rheMac8.chr6 I 34 C 0 s macFas5.chr6 179963680 5 - 181584905 AAGCC i macFas5.chr6 I 34 C 0 s macNem1.NW_012013899v1 63507 5 - 100774 AAGCC i macNem1.NW_012013899v1 I 35 C 0 s cerAty1.NW_012009470v1 16186359 5 + 16742782 GAGCC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89533595 5 - 91010382 AAGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6137228 5 + 6207128 AAGCC i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr2 179976 5 - 204313951 GAGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 142048 5 - 16417988 GAGCC i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 40810 211 + 514179 I a score=312631.000000 s hg38.chr3_KI270779v1_alt 6839 51 + 205312 T-GCCCTGCTCAC-AGTGGATAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC s panTro5.chr3 543707 51 - 202621043 T-GCCCTGCTCAC-AGTGGATAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 484782 51 - 205426864 T-GCCCTGCTCAC-AGTGGATAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 39971 52 - 837792 T-GCCCTGCTCACTAGTGGATAACTTTCTTCCTGAAGTTGATTTTCCAAGGAC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120769816 51 + 123690457 T-GCCCTGCTCAC-AGTGGGTAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 242579 51 + 180051392 T-GCTCTGCTCGC-AGTGGATAACTTTCTTTCTGAAGTTCATTTTCCAAGGAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179963685 51 - 181584905 T-GCTCTGCTCGC-AGTGGATAACTTTCTTTCTGAAGTTCATTTTCCAAGGAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63512 52 - 100774 TGGCTCTGCTCGC-AGTGGATAACTTTCTTCTCGAAGTTCATTCTCCAAGGAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16186364 51 + 16742782 T-GCTCTGCTCGC-AGTGGATAACTTTCTTTCTGAAGTTCATGTTCCAAGGAC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89533600 51 - 91010382 T-GCTCTGCTCAC-AGTGGATAACTTTCTTTCTGAAGTTCATTTTCCAAGGAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6137233 51 + 6207128 T-GCTCTGCTCGC-AGTGGGTAACTTTCTTTCTGAAGTTCATGTTCCAAGGAC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 41021 51 + 514179 T-GCTCTGCTTGC-AGTGGATAACTTTCTTTCTGAAGTTCATTTTCCAAGGAC i colAng1.NW_012118799v1 I 211 C 0 s calJac3.chr2 179981 33 - 204313951 T-GCTGTGCTCGC-------------------TGGAGTTGATTTTCCAAGGAC i calJac3.chr2 C 0 I 309 s saiBol1.JH378155 142053 33 - 16417988 C-GCTGTGCTCTC-------------------TGGGGTTGATTTTCCAAGGAC i saiBol1.JH378155 C 0 C 0 a score=4310666.000000 s hg38.chr3_KI270779v1_alt 6890 631 + 205312 AAAGGAATCATTAGGACAA---ATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCTACCGCTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACGGCGTG-CGTGAGCGCAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGC-TCTGTCCAGCCGAAAGCCTTTTGGTAAGTTGGGGGTCCTTGAATTTCCTGGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------CTGGGGGGTGATTGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAACTGC-AGAAAC-TGGGACTGGGTTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGCG-TTCTTATCAGTGTGCGAAT-----------------ATTGGGCGTTCAGGCAGCGGGAAATCTGGGTCCTTGGCGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCTCCCCTGAGCTATCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT s panTro5.chr3 543758 627 - 202621043 AAAGGAATCGTTAGGACAAATTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCTACCGCTGTCACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTG-CGTGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGCTTCTGTCCAGCCGAAAGCCTTTTGGTCAGTTGGAGGT-CTTGAATTT-CTGGGTGACTGCAGCTTGGTGACTTCTCTGAATAGACCTTC-AGGG-A--------------------CT-GGGGGTGATTGTTGGAGGGCGTTGGGGAGCTCAAGCAGCACTTGTGTGGGAAC-TTGCTGTTACAGGAACTGC-AGAAAC-TGGGACTGGGTTCCT---GGGAAAGGATTGGGGGTGTTGGA-GCGCTGGCAGGGGAGTTAT-GGGGAGGCGCTTCTTATCAGTGTGCGAAT-----------------ATTGGGCGTTCAGGCAGCGGGAAATCCGGGTCCCT-GCGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCT-CCCTGAGCTATCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATCGCCTCAGGGCC-GTCATCT i panTro5.chr3 C 0 N 0 s panPan2.chr3 484833 637 - 205426864 AAAGGAATCATTAGGACAAATTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCTACCGCTGTCACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTG-CGTGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGC-TCTGTCCAGCCGAAAGCCTTTTGGTCAGTTGGAGGTGCTTGAATTTCCTGGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------CTGGGGGGTGATTGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAACTGCAAGAAACGTGGGGCTGGGTTCCGTAGGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACTGGGCGTTCAGGCAGCGGGAAATCCGGGTCCTT-GCGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCTCCCCTGAGCTATCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i panPan2.chr3 C 0 I 1 s gorGor5.CYUI01015777v1 40023 633 - 837792 AAAGGAATCATTAGGACAAATTATTATTACTGCTTCATGGTGGAGATGCTTCAGGTTTATTTTGTGGCTACCGCTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTG-CGTGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGC-TCTGTCCAGCCGAAAGCCTTTTGGTCAGTTGGAGGTCCTTGAATTTCCTGGGTGACTGCAGCTTGGTGACTTCTCTGAATAGACCTTCGAAGGCA--------------------CTGGGGGGTGATTGCTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTAGAGGAACTGC-AGAAAC-CGGGACTGGGTTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGCG-TTCTTATCAGTGTGCGAAT-----------------ACTGGGCGTTCAGGCAGCGGGAAATCCGGGTCCTT-GCGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCTCCCCTGAGCTCTCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120769867 633 + 123690457 AAAGGAATCATTAAGACAAATTATCATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCCACCACTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTG-CGTGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGCTGTAGG-CTTGGGAGGGGAATAGGAAGGTTAGC-TCTGTACAGCCGAAAGCCTTTTGGTAGGTTGGAGGTCCTTGAATTTCCTCAGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------CTGGGGGGTGATTGTTGGAGGGC-TTGGGGAGCTCAGGCAGCATTTGTGTGGGAACGTGGCTGTTACAGGAACTGC-AGAAAC-TGGGACTGGATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACCTGGCGTTCAGGCAGCGGAAAATCCGGGTCCTT-GCGTGTTGTGAGCTCTCTGGAGTTACGTTCTTGCCAATTTCAGCTCAATTGAT-CCCCCTCCCCTGAGCTATCATTGGATACATTTTACTTCGTTGAACATCTGACTGCTGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 242630 629 + 180051392 AAAGGGATCATTAGGACAAAGTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTCTGTTGTGGCTGCCGCTGTTA---TTTGGAGTGCCTCACCAAGCCGGCTGACAACTGCGTG-CATGAGCACAA-------GGAAAGGCTTCTTGTGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGCTTAGC-TCTGTACAGCCGGAAGCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGGTGGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAGCCGC-AAACAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAT-GGGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACTGGACGTTCAGGCGGC-GGAAATCCGGGTCCTT-GGGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCTCCCCTGCGGTATCATTGGACACATTTTACTTCATTGAACACCTGACTGCGGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179963736 629 - 181584905 AAAGGGATCATTAGGACAAAGTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTCTGTTGTGGCTGCCGCTGTTA---TTTGGAGTGCCTCACCAAGCCGGCTGACAACTGCGTG-CATGAGCACAA-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGAAATAGGAAGCTTAGC-TCTGTACAGCCGGAAGCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTAACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGGTGGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGGACGTGGCTGTTACAGGAGCCGC-AAACAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAT-GGGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACTGGACGTTCAGGCGGC-GGAAATCCGGGTCCTT-GGGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCTCCCCTGCGGTATCATTGGACACATTTTACTTCATTGAACACCTGACTGCGGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 63564 634 - 100774 AAAGGGATCATTAGGACAAA-TATTATTACTGCTTCATGGGTGAGATGCTTCTGGTTTCTGTTGTGGCTGCCGCTGTTA----TTGGAGTGCCTCACCAAGCCGGCTGACAACTGCGTGCCATGAGCACAAGAAAGCTGGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGCTTAGC-TCTGTACAGCCGGAAGCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGGTGGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGGACGTGGCTGTTACAGGAGCCGC-AAACAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAT-GGGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACTGGACCTTCAGGCGGC-GGAAATCCGGGTCCTT-GGGTGTTGTGAGCTCCCTGCAGTTA-GTTCTTGCCAGTTTCAGCTCAATTGAT-CCCCCTCCCCTGCGGTATCATTGGACACATTTTACTTCATTGAACACCTGACTGCGGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16186415 625 + 16742782 AAAGGGATCATTAGGACAAAGTGTTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATGTTGTGGCTGCCGCTGTTC---TTTGGAGTGCCTCACCGAGTCAGCTAACAACTGCGTG-CATGAGCACAA-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGCTTAGC-TCTGTACAGCCGGAAGCCTTTTGGTAAATTGGAGGTCCTTGAATTTCCTCGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGATTGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAGCCGC-AGAAAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAC-GGGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACTGGGCGTTCAGGCGGCGGGAAATCCGGGTCCTT-GGGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATTGATGCCCCCTCCCCTGGGA------AGGTCATGTTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATC-CCTTGGGGGCAGTCATCT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89533651 624 - 91010382 AAAGGGATCATTAGGACAAAGTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTGTGTTGTGGCTGCCGCTGTTA----TTGGAGTGTCTCACCAGGCCGGCTAACAACTGCGTG-CATGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGCTTAGC-TCTGTACAGCCGGAAGCCTTTTGGTAAGCTGGGGGTCCTTGAATTTCCTCGGTAACTGCATCTCGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGCGGGGTGATTGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAGCCGC-AGAAAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGCTAGAGGCGCTGGCAGGGGAATTAT-GAGGAGGTG-TTCTTATCAGTGTGCGAAT-----------------ACTGGGCGTTCAGGCGGCGGGAAATCCGGGTCCTT-GGGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATGGATCCCCCCTCCCCTGGGA------AGGTCACGTTTTACTTCATTGAACACCTGACTGCCGCCTTTTCTGTAATC-CCTTGGGGGCAGTCATCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6137284 625 + 6207128 AAAGGGATCATTAGGACAAAGTGTTATTACTGCTTCGTGGTGGAGATGCTTCTGGTTTATGTTGTGGCTGCCGCTGTTC---TTTGGAGTGCCTCACCGAGTCAGCTAACAACTGCGTG-CATGAGCACAA-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGAAGGGAAATAGGAAGCTTAGC-TCTGTACAGCCGGAAGCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTAACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGATTGTTGGAGGGC-TTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAGCCGC-AGAAAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAT-GGGGAGGTG-TTCTTATCAGTGTGCGAAC-----------------ACTGGGCGTTCAGGCGGCGGGAAATCCGGGTCCTT-GGGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATTGATCCCCCCTTCCCTGGGA------AGGTCACGTTTTATTTCATTGAACACCTGACTGCAGCTTTTTCTGTAATC-CCTCAGGGGCAATCATCT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 41072 631 + 514179 AAAGGGATCATTAGGACAAAGTATTATTACTGCTTCCTGGTGGAGATGCTTCTGGTTTATGTTGTGGCTGCCGCTGTTACTGCTTGGAGCGCCTCACCAAGCCGGCTAACAACCGCGTG-CGTGAGCACAA-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTGGGAGGGGAATAGGAAGCTTAGC-TCTGTACAGCGGGAAGCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTGACAGCATCTTGATGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGATTGTTGGGGGGC-TTGGGGAGGTCAGGCAGCACTTGTGTGGGAATGTGGCTGTTACAGGAGCCGC-AGAAAC-GGGGACTGCATTCCT--GGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAT-GGGGAGGTG-TTCTTACCAGTGTGCGAAT-----------------ATTGGGCGTTCAGGCAGCGGGAAATCCGGAT-CTT-AGGTGTTGTGAGCTCCCTGGAGTTA-GTTCTTGCCGGTTTCAGCTCAATTGAT-CCCCCTCCCCTGCGGTATCATTGGACACATTTTACTTCATTGTACACCTGACTGCCGCTTTTTCTGTAATC-CCTCAGGGGCAGTCATCT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 180323 621 - 204313951 aaaagaGCCATCAAGACACGTTATTATTACCGCTTCATGGTGGAGATGCTTCTGGTTTATTTT-----------------------GAGTGCCTCACCGAGCCAGCTAACAGCTGCGTG-CGTGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTAGGGTGTGGGTTTTAGGAGGGGGGTAGGAAGATTAG---CTCTGCAGCAGAAACCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTGACTGCACCTTGGTGACTTCTCTGCATAGACCATCGAGGGCACTAAAGGGTTACCAGGCGGCCTGGGAGGTGATTGTTGGAGGGC-TTGAGGAACTCAAGCAGCACTTGTGTGGGAATGTGACTGCTGCAGGAACTGC-AGATAC-CGGGACTGGGTTCTG--GGGGAAAGGACTGGGGGTGTTGGAGGTGCAGGCAAGGGATTTATGGGGGAGGTG-TTCTTATCAGTGTGGGAAT-----------------ACTGGGCGTTCGGGCA---GGGAATCTGGGTCCTT-GCG-ACTGGGGGCTCTCTGGAGTTACCTTCTTGCCAGTTTCGGCTCAGTTGAT--CCCCTCCCCTGCAGTACCTTTAGACACATTTTACTTCGTTGAACACCTGACTGCCC--GTTCCCGTATTC-CCTCA--TGCAGTCATCT i calJac3.chr2 I 309 C 0 s saiBol1.JH378155 142086 642 - 16417988 AGAAAAGCCATTAGGACACGTTATTGTTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTT-----------------------GAGTGCCTCACCAAGCCAGCTAATAACTGCGTG-CGTGAGCACAG-------GGAAAGGCTTCTTGAGAAATGAAAACTGGGAGGCGGGTTTTAGGAGGGGG--AGGAAGATCAGC-TCTCTACAGCA-AAACCTTTTTGGTAAGTCGGACGTCCGTGAATTTCCTTGGTGACTGCGTCTTGGTGAATTCTCTGCATAGACCCTCGAGGGCACCGCGCGGTTACCAGGTGGCCTGGGAGGTGACTGTCGGAGGGC-TTGGGGAACTCAAGCAGTACTTGTGTGGGAATGTGACTGCTGCAGGAACTGC-AGATTC-CGGGACTGGATTCCT--GGGGAAAGGGCTGGGCGTGTTGGACGTGCTGGCAAGGGATTTATGGGGGAGGTG-TTCTCATCGGTGTGGGAACTGGGCATCGGTGTGGGAACTGGGCGTTCCGGCA---GGGAATCTGGGTCCTT-CCA-GCTGGGGGCTCTCTGGAGTTACCTTCTTGCCAGTTTCGGCTCAATTGAT-CCCCCTCCCCTGCAGTACCATTAGACACATTTTACTGCATGCAACACCTGACTGCCCCTGTTTCTGTGATC-CCTCAGCTGCAGTCATCT i saiBol1.JH378155 C 0 C 0 a score=2679407.000000 s hg38.chr3_KI270779v1_alt 7521 370 + 205312 TTTCTGATTCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGAA-CTGGGGCGCGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCGCT--------GTGGGTGGTG----GGGGGGGAGGTGCTGGATTCAGTCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATGTT-----ATCAGTTCCTAATATGTGACGTATGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT s panTro5.chr3 199990402 374 + 202621043 TTTCTGATTCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGAA-CTGGGGCGCGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCGCT--------GTGGGTTGGGCGGCGGGGGGGGGGTGCTGGATTCAGTCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATGTT-----ATCAGTTCCTAATATGTGACGTATGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i panTro5.chr3 N 0 C 0 s panPan2.chr3 485471 372 - 205426864 TTTCTGATTCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAAGGTCTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGAA-CTGGGGCGCGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCGCT--------GTGGGTTGGG----CGGAGGGGGGTGCTGGATTCAGTCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATGTT-----ATCAGTTCCTAATATGTGACGTATGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i panPan2.chr3 I 1 C 0 s gorGor5.CYUI01015777v1 40656 367 - 837792 TTTCTGATTCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTGAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTCTTAGTGGGAAGTACCTGATGTTGCCAGAGACTGAA-CTGGGGCGCGGGGAGCACTGCGGCTGCTAGACACTGCCTCGCTGCGCT--------GTGGGTGGGG------------GGTGCTGGATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTGACATGTTTACCTTATATTCTGACATCCGTTCCTGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120770500 363 + 123690457 TTTCTGATTCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAATGGGGTCAGTTTTGAGATGATGTGAAAATGTTGAAAGG--ATCCTTGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGGACCTGGGGCACGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCGCT--------GTGGGTGGGG------------GGTGCTGGATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCATATGAC-----ATCAGTTCCTAATATGTGACGTGTGGGTCACAGATGCTGGTGTATTATTTCACATGCATTTGTGTAGATTGTTTTCAGGGAATTCAGAAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243259 368 + 180051392 TTTCCGATTCTGTGTATAGTTTCCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTACGGCTGCTGGACACTGCCTCACTGCGCT--------GTGCCTGGGG-----------GGATGCTTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATACGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179964365 368 - 181584905 TTTCCGATTCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTACGGCTGCTGGACACTGCCTCACTGCGCT--------GTGCGTGGGG-----------GGATGCCTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATACGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64198 368 - 100774 TTTCCGATTCTGTGTATAGTTTCCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTACGGCTGCTGGACACTGCCTCACTGCGCT--------GTGCGTGGGG-----------CGATGCTTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTCCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATACGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i macNem1.NW_012013899v1 C 0 I 16 s cerAty1.NW_012009470v1 16187040 368 + 16742782 TTTCTAAATCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCGATTTAAGCTAGAAAAGGGATCGGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGGA-CTGGGGCGCAGGGAGCACTATGGCTGCTGGACACTGCCTCACTGCGCT--------GTGCGTGGGG-----------GGATGCTTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89534275 368 - 91010382 TTTCTGATTCTGTGTATAGTTTCCC-TTTCCAGAT-CCGTGCCATTTAAGCTCGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTCGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTAGGGCTGCTGGACACTGCCTCACTGCGCT--------GTGCGTGGGG-----------GGATGCTTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6137909 368 + 6207128 TTTCTAAATCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGACACAGGGAGCACTATGGCTGCTGGACACTGCCTCACTGCGCT--------GTGCGTGGGG-----------GGATGCTTCATTCAGCCTTACTGCCTAATGATTTATGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCCGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 41703 368 + 514179 TTTCTGAATCTGTGTATAGTTTGCC-TTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAGG--CTCCTCGTTATTAGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGACGCGGGGAGCACTACAGCTGCCGGACACTGCCTCACTGCGCT--------GTGCATGGGG-----------GGATGCTAGATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAAAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAAT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 180944 373 - 204313951 TTTCCCATCCAGTGTATAGTTTATCTTTTCCAGATCCCGTGCCATTTAAGCTGGAAAGGGGGTCAGTTTTGAGA---TGTGAAAATGTTGTGAGG--CTCCTCTTTATTAGTGGGAAATATCTGACGATTCCAGAGATTGGA-CTGGGGTGCGGGGAGCATCATGGCTGCTAGACGCTGCCTCACTGTGACTGTGCTGCGGGGGCGGGA-----------GGGGGCTGGATTCAGCCTTACTGCCTATTGATTTGTGAGGATTTGTGTTTTCAGAGTGACATGTTCACCTTGTATTCTGACAT--GTTCCTAATGTGTGATGTGTGGGCTACGGATGCTGGGGTATTATTTCACATGCATTTACGTAGACTGATTGCAGGGAACTAAGAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 142728 362 - 16417988 TTTCTGATCCTGTGTATAGTTTATC-TTTCCAGAT-CCGTGCCATTTGAGCTGGAAAAGGGGTCAGTTTTGAGA---TGTGAAAATGTTGAGAGG--TTCTTCTTTATTAGCGGGAAGTAGCTGACGTTTCCAGAGGCTGGA-CTGGGTTTCGGGGAGCATCATGGCTGCTAGACCCTGCCTTACTGG-----------GGGGGTGGGA-----------GGGGGCTAGATTCAGCCTTACTGCCTATTGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTAACGTGTGATGTGTGGGCTACGGATACTGGTGTATTATTTCACATACATTTACGTAGATTGCTTGCAGGGAATTAAGAAAT i saiBol1.JH378155 C 0 C 0 a score=74908.000000 s hg38.chr3_KI270779v1_alt 7891 13 + 205312 TCTGTTATCTCTA s panTro5.chr3 199990776 13 + 202621043 TCTGTTATCTCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 485843 13 - 205426864 TCTGTTATCTCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41023 13 - 837792 TCTGTTATCTCTA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120770863 13 + 123690457 TCTGTTATCTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243627 13 + 180051392 TCTGTTATCTCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179964733 13 - 181584905 TCTGTTATCTCTG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16187408 13 + 16742782 TCTGTTATCTCTG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89534643 13 - 91010382 TCTGTTATCTCTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138277 13 + 6207128 TCTGTTATCTCTG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42071 11 + 514179 TCTGTTATCGG-- i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181317 13 - 204313951 TCTGTTGTCTCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 143090 13 - 16417988 TCTGTTATCTCTC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 64566 16 - 100774 I a score=1463558.000000 s hg38.chr3_KI270779v1_alt 7904 217 + 205312 CACTAGTGATTGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTT-ATTTGCAT--CT----CAGTTTATTTATACTC-GGG--AAGTGCAA-GACATGGCGACTAGAAAGAGATGTCAAGAGAACCCGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACT--TCCTAAATGTTGACCACAGTGGATGCAAAT-------------------------GGCTCTGTGCA----- s panTro5.chr3 199990789 217 + 202621043 CACTAGTGATTGTGCTTTC-TTGGTTTTTGTCTTTTCATTATTCTTAAATCCTCCTTTTTTT-ATTTGCAT--CT----CAGTTTATTTATACTC-GGG--AAGTGCAA-GACATGGCGACTAGAAAGAGATGTCAAGAGAACCCGGAATCCAGTAGGCTACAATTTGGCAAATCTCAGCTTAAAACT--TCCTAAATGTTGACCACAGTGGATGCAAAT-------------------------GGCTCTGTGCA----- i panTro5.chr3 C 0 C 0 s panPan2.chr3 485856 217 - 205426864 CACTAGTGATTGTGCTTTC-TTGATTTTTGTCTTTTCATTATTCTTAAATCCTCCTTTTTTT-ATTTGCAT--CT----CAGTTTATTTATACTC-GGG--AAGTGCAA-GACATGGCGACTAGAAAGAGATGTCAAGAGAACCCGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACT--TCCTAAATGTTGACCACAGTGGATGCAAAT-------------------------GGCTCTGTGCA----- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41036 216 - 837792 CACTAGTGATTGTGCTTTC-TTGATTTTTGTCTTTTCATTATTCTTAAATCCT--TTTTTTA-ATTTGCAT--CT----CAGTTCGTTTATACTCGGGG--AAGTGCAA-GCCATGGCTACTAGAAAGAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCACATCTTAGCTTAAAACT--TCCTAAATGTTGGCCACAGTGGATGCAAAT-------------------------GGCTCTGTGCA----- i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120770876 217 + 123690457 CGCTAGTGATTGTGCTTTC-TTGATTTTTCTTTTCTCATTATTCTTAAATCCTCCTTTTTTT-ATTTGCAT--CT----CAGTTCATTTATACTC-GGG--AAGTGCAA-GACGTGGCTACTAGAAAGAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACT--TCCTAAATGTTGACCACAGTGGATGCAAAT-------------------------GGCTCTGTGCA----- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243640 218 + 180051392 CTCTAGTGATTGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCAT--CT----CGGTTCCTTTATACTT-GGG--AAGTGCAA-GACATGGCTACTAGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACG--TCCTAAATGTTGACCACAGTGGGTGCAGAT-------------------------GGCTCTGTGCA----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179964746 218 - 181584905 CTCTAGTGATTGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCAT--CT----CGGTTCCTTTATACTT-GGG--AAGTGCAA-GACATGGCTACTGGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACG--TCCTAAATGTTGACCACAGTGGGTGCAGAT-------------------------GGCTCTGTGCA----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64582 220 - 100774 CTGAGTGGATTGTGCTTTCTTTGATTTTTCTCTTTTCATTGAGTCTAAA---TCTTTTTTCTGGTTTGCATTCCT----CGGTTCATTTATAC-T-GGG--AAGTGCAAGGACATGGCTACTAGAAAAAGAATTCAAGAGAACCTGGAATCCCAGTAGCTACAATTTGGCAAATCTTAGCTTAAAACGGTCTCTCAATGTTGACCACAGTGGGTGCAGAT-------------------------GGCTCTGTGCA----- i macNem1.NW_012013899v1 I 16 I 28 s cerAty1.NW_012009470v1 16187421 218 + 16742782 CTCTAGTGATTGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCAT--CT----CAGTTCCTTTATACTT-GGG--AAGTGCAA-GACATGGCTACTGGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACG--TCCTAAATGTTGACCACAGTGGATGCAGAT-------------------------GGCTCTGTGCA----- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89534656 218 - 91010382 CTCTAGTGATTGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCAT--CT----CAGTTCCTTTATACTT-GGG--AAATGCAA-GGCATGGCTACTGGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAAGCTACAATTTGGCAAATCTTAGCTTAAAACG--TCCTAAATGTTGACCACAGTGGATGCAGAT-------------------------GGCTCTGTGCA----- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138290 218 + 6207128 CTCTAGTGAATGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCAT--CT----CAGTTCCTTTATACTT-GGG--AAGTGCAA-GACATGGCTACTGGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACG--TCCTAAATGTTGACCACAGTGGATGCAGAT-------------------------GGCTCTGTGCA----- i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42082 240 + 514179 CACTAGTGATTGTGCTTTC-TCGATTTTTCTCTTTTCATTATTCTTAAA---TCCTTTTTTCTATTTGCAT--CT----CAGTTCATTTATACTT-GGG--AAGTGCAA-GACATGGCTACTAGAAAAAGATGTGAAGAGAACCTGGAATCCAGTAGGCTACAGTTTGGCAAATCTTAGCTTAAAACG--TCCTAAATGTTGACCACAGTGGATGCAGatctgtgaaatcatctgtgaaatcaCAGGCTCTGTGCA----- i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181330 228 - 204313951 CACCAGTGATTGTGCTTTC-TTGATTTTCCTCTTTTCATTATTCTTAAATCCCCCTTTTTAA-ATTTGCAT--CTTTGCCAGTTCATTTATACTC-GGGGTAAGTGCAG-GACAGGGCCACTAGAAAAAGGCGCCAGGAGAAGCTGGAATCCAGTAGGCTGCAGTTTGGCAGATCATAGCTTAAACCG--TCCTAAATGTTGACCACAATAGATGCAAGT-------------------------GGCTCTGTGTGTCGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 143103 226 - 16417988 CATTAGTGATTGTGCTTTC-TTGATTTTTCTCTTTTCATTATTCTTAAATCCCCCTTTTTTT-ATTTGCAT--CTTTACTAGTTTATTTATACTT-GGGGTAAGTGCAG-GACATTACTATTGGATAAAGGTGTT--GAGAACCTGGAATCCAGTAGGCTACGGTTTAGCAGATCATAGATTAAACCA--TCCTAAATGTTGACCACAATGGATCCAAGT-------------------------GGCTCTGTGTGTGGCA i saiBol1.JH378155 C 0 C 0 a score=132850.000000 s hg38.chr3_KI270779v1_alt 8121 26 + 205312 TCGTCTGTTCAATATGGTCAGGTGAC s panTro5.chr3 199991006 26 + 202621043 TCGTCTGTTCCATATGGTCAGGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 486073 26 - 205426864 TCGTCTGTTCAATATGGTCAGGTGAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41252 26 - 837792 TCGTCTGTTCAGTATGGTCAGGTGAC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771093 26 + 123690457 TCATCTGTTAAATATGGTCAGATGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243858 26 + 180051392 TCATCTGTGAAATGTGGTCAGATGAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179964964 26 - 181584905 TCATCTGTGAAATGTGGTCAGATGAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16187639 26 + 16742782 TCATCTGTGAAATGTGGTCAGATGAC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89534874 26 - 91010382 TCATCTGTGAAATGTGGTCAGACGAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138508 26 + 6207128 TCATCTGTGAAATGTGGTCAGATGAC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42322 26 + 514179 TCATCTGTGAAATGTGGTCCGATGAC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181558 26 - 204313951 TCACATGTTAAATACAGTCAGATGAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 143329 25 - 16417988 TCACGT-TTAAATACGGGCAGATGAC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 64802 28 - 100774 I a score=78793.000000 s hg38.chr3_KI270779v1_alt 8147 11 + 205312 CACCCAG---G-TTC s panTro5.chr3 199991032 11 + 202621043 CACCCAG---G-TTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 486099 11 - 205426864 CACCCAG---G-TTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41278 11 - 837792 CACCCAG---G-TTC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771119 11 + 123690457 CACCCAG---G-TTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243884 11 + 180051392 CACCCAG---G-TTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179964990 11 - 181584905 CACCCAG---G-TTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64830 12 - 100774 CACCCAG---GTTTC i macNem1.NW_012013899v1 I 28 C 0 s cerAty1.NW_012009470v1 16187665 11 + 16742782 CACCCAG---G-TTC i cerAty1.NW_012009470v1 C 0 I 5654 s chlSab2.chr4 89534900 11 - 91010382 CACCCAG---G-TTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138534 11 + 6207128 CACCCAG---G-TTC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42348 11 + 514179 CACCCAG---G-TTC i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181584 11 - 204313951 CACCCAG---G-TTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 143354 14 - 16417988 CACCAGGTTCA-TTC i saiBol1.JH378155 C 0 C 0 a score=103353.000000 s hg38.chr3_KI270779v1_alt 8158 19 + 205312 ACGTGGTTTGT-CACCAGGG s panTro5.chr3 199991043 19 + 202621043 ACGTGGTTTGT-CACCAGGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 486110 19 - 205426864 ACGTGGTTTGT-CACCAGGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41289 19 - 837792 ACGTGGTTTGT-CACCAGGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771130 19 + 123690457 AAGTGGTTTGT-CACCAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243895 19 + 180051392 AAGTGGTTTGT-CACCAGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965001 19 - 181584905 AAGTGGTTTGT-CACCAGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64842 20 - 100774 AAGTGGTTTGTCCACCAGGG i macNem1.NW_012013899v1 C 0 I 37 s chlSab2.chr4 89534911 19 - 91010382 AAGTGGTTTGT-CACCAGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138545 19 + 6207128 AAGTGGTTTGT-CACCAGGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42359 19 + 514179 AAGTGGTTTGT-CACCAGGG i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181595 17 - 204313951 ACGTGGTTCAT-CACTGG-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 143368 17 - 16417988 ACATGGTTCAT-CACCAG-- i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=175518.000000 s hg38.chr3_KI270779v1_alt 8177 32 + 205312 TGATACGAGCCACACGGAGTGCCCTCCTCAGA s panTro5.chr3 199991062 32 + 202621043 TGATACGAGCCACACGGAGTGCCCTCCTCAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 486129 32 - 205426864 TGATACGAGCCACACGGAGTGCCCTCCTCAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41308 32 - 837792 TGATACGAGCCACACGGAGTGCCCTCCTCAGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771149 32 + 123690457 TGATACGAGCCACACGGAGTGCCCTCCTCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243914 32 + 180051392 TGGTACGAGCCACACAGAGTGCCCTCCCCAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965020 32 - 181584905 TGGTACGAGCCACACAGAGTGCCCTCCCCAGA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89534930 32 - 91010382 TGATACAAGCCTCACAGAGTGCCCTCCCCAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138564 32 + 6207128 TGGTACGAGCCACACAGAGTGCCCTCCCCAGA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42378 32 + 514179 TGGTACGAGCCACACGGAGTGCCCTCCCCAGA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181612 32 - 204313951 TGATACAAGCCCCACGGAGTGCCCTCCTCAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 143385 32 - 16417988 TGATACAGGCCCCATGGAGTGCCCTCCTCAGG i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 64862 37 - 100774 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=538752.000000 s hg38.chr3_KI270779v1_alt 8209 83 + 205312 GGCCATGTCTCAGAGACGTTTATTTTGAGTGGTTTTCCA-------GCGAGTGATGCAAGATTTATGATCCATTTTAACAG-CTGCTTTTT s panTro5.chr3 199991094 83 + 202621043 GGCCATGTCTCAGAGACGTTTATTTTGAGTGGTTTTCCA-------GCGAGTGATGCAAGATTTATGATCCATTTTAACAG-CTGCTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 486161 84 - 205426864 GGCCATGTCTCAGAGACGTTTATTTTGAGTGGTTTTCCA-------GCGAGTGATGCAAGATTTATGATCCATTTTAACAGCCTGCTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41340 84 - 837792 GGCCATGTCTCAGAGACGTTTATTTTGAGTGGTTTTCCA-------GCGAGTGATGCAAGATTTATGATCCATTTTAACAGCCTGCTTTTT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771181 84 + 123690457 GGCCATGTCTCAGAGACATTTATTTTGAGTGGTTTTCCA-------GTGAGTGATGCAAGATTTATGATCTATTTTAACAGCCTGCTTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 243946 84 + 180051392 GGCCATGTCGCGGAGACATTTATTTTGAGTGGTTTTCCA-------GTGAGTGATGCAAGATTTATGATCCATTTTAACAGCCTGCTTTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965052 84 - 181584905 GGCCATGTCGCGGAGACATTTATTTTGAGTGGTTTTCCA-------GTGAGTGATGCAAGATTTATGATCCATTTTAACAGCCTGCTTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64899 90 - 100774 GGCCATGTCGCAGAGATGTTTATTTTGAGTGGTTTTCCACCCCCTGGTGAGTGATGCAAGATTTAT-ATCCATTTTAACAGCCTGCTTTTT i macNem1.NW_012013899v1 I 37 C 0 s chlSab2.chr4 89534962 84 - 91010382 GGCCATGTTGCAGAGACATTTATTTTGAGTGGTTTTCCA-------GTGAGTGATGCAAGGTTCATGATCCATTTTAACAGCCTGCTTTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138596 83 + 6207128 GGCCATGTCGCAGAGACGTTTATTTTGAGTGGTTTTCCA-------GTGAGTGATGCAAGATTTATGATCCATTTTAACAGCCTGCTTT-T i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42410 84 + 514179 GGCCATGTCGCAGAGACATTTGTTTTGAGTGGTTTTCCA-------GTGAGTGGTGCAAGGTTTATGATCCATTTTAACAGCCTGCTTTTT i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 181644 84 - 204313951 GGCCATGTCTCAGAGATGTTCATTTTGAGAGGTTTTCCA-------GTGAGTGATGCAAGATTTATGATCCATTTTAGCAGCCTGCttttt i calJac3.chr2 C 0 I 1023 s saiBol1.JH378155 143417 84 - 16417988 GGCCATGTCTCAGAGATGTTCATTTTGAGAGGTTTTCCA-------GTGAGTGATGCAAGATTTATGATCCATTTTAGCAGCCTGCATTTT i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=420625.000000 s hg38.chr3_KI270779v1_alt 8292 87 + 205312 AT-GCATTTGCTCAAATTTTTAGATTTTAAGTTTAGTTTTA-GGTTTTCTGTT-AATTTGC-TCAACTAGGAG----TGGTGGTCAAA-TACTGGA s panTro5.chr3 199991177 88 + 202621043 AT-GCATTTGCTCAAATTTTTAGATTTTAAGTTTAGTTTTA-GGATTTCTGTTAAACTTGC-TCAACTAGGAG----TGGTGGTCAAA-TACTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 486245 88 - 205426864 AT-GCATTTGCTCAACTTTTTAGATTTTAGGTTTAGTTTTA-GGTTTTCTGTTAAACTTGC-TCAAATAGGAG----TGGTGGTCAAA-TACTGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41424 88 - 837792 CT-GCATTTGCTCAAATTGTTAGATTTTAAGTTTAGTTTTA-GGTTTTCTGTTAAACTTGC-TCAACTAGGAG----TGGTGGTCAAA-TACTGGA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771265 88 + 123690457 AT-GCATTTGCTCAAATTTTTAGATTTTAGGTTTAGTTTTA-GGTTTTGTGTCATACTTGC-TCAACTAGGAG----TGGTGGTCAAA-TACTGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244030 88 + 180051392 AT-GCGTTTGCTCAGGTTTTTAGATTTTAGGTTTAGTTTTA-GGTTTTCTGTTAAACTTGC-TCACCTAGGAG----TGGTGGTCAAA-TACTGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965136 88 - 181584905 AT-GCGTTTGCTCAGGTTTTTAGATTTTAGGTTTAGTTTTA-GGTTTTCTGTTAAACTTGC-TCACCTAGGAG----TGGTGGTCAAA-TACTGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 64989 93 - 100774 ATGGCGTTTGCTCAGGTTTTTAG-TTTTAGGTTTCGTTTTAGGGTTTTCTGT--AACTTGCATCACCTAGGAGGGGTGGGTGGTCAAATTACTGGA i macNem1.NW_012013899v1 C 0 I 38 s chlSab2.chr4 89535046 88 - 91010382 AT-GCGTTTGCTCAGGTTTTTAGCTTTTAGGTTTAGTTGTA-GGTTTTCTGTTAAACTTGC-TCACCTAGGAG----TGGTGGTCAAA-TACTGGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138679 88 + 6207128 AT-GCGTTTGCTCAGGTTTTTAGATTTTAGGTTTAGTTTTA-GGTTTTCTGTTAAACTTGC-TCACCTAGGAG----TGGTGGTCAAA-TACTGGA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42494 88 + 514179 AT-GCGTTTGCTCAAGTgtttagattttaggtttagtttta-ggtttTCTGTTAAACTCGC-TCACCTAGGAA----TGGTGGTCAAA-TACTGGA i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143501 87 - 16417988 AT-CCATTTGCTCAGATTTTTAGAGTACTGA-CCAGTTTTA-AGTTTTGCGTTAAGCTTGC-TCAACTAGGAG----TGGTGGTCAAA-TACTGGA i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=166081.000000 s hg38.chr3_KI270779v1_alt 8379 36 + 205312 CCTCATTAGCATGGTAGCCTGCCCTCCTTGGCAGGC s panTro5.chr3 199991265 36 + 202621043 CCTCATTAGCATGGTAGCCTGCCCTCCTTGGCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 486333 36 - 205426864 CCTCATTAGTATGGTAGCCTGCCCACCTTGGCAGGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41512 36 - 837792 CCTCATTAGCATGGTAGCCTGCCCACCTTGGCAGGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771353 36 + 123690457 CCTCATTAGCATGATAGCCTGCCCACCTTGGCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244118 36 + 180051392 CCTCATTAGCGTGAAAGCCTGCCCACCTTGGCAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965224 36 - 181584905 CCTCATTAGCGTGAAAGCCTGCCCACCTTGGCAGGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89535134 36 - 91010382 CCTCATTAGCATGAAAGCCTGCCCACCTTGGCAGGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138767 36 + 6207128 CCTCATTAGCGTGAAAGTCTGCCCACCTTGGCAGGC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42582 36 + 514179 CCTCATTAGCGTGAAAGCCTGCCCACCTTGGCAGGC i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143588 36 - 16417988 CCTAGTTAGCGTGATAGCCTGCCTACCTTGGCAGGC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 65082 38 - 100774 I e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=915048.000000 s hg38.chr3_KI270779v1_alt 8415 176 + 205312 TCCACTGGAGTGCCTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgcc-gttact-gggagggagtattgaggaaatgcatgcgaggtgcct-ccgtgattcctggcacggag--caagtgctcagtaattgtcagctgtg-agtattAGTAGTAGCTAATACA s panTro5.chr3 199991301 176 + 202621043 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgcc-gttact-gggagggagtattgaggaaatgcatgcgaggtgctt-ccgtgattcctggcacggag--caagtgctcagtaattgtcagctgtg-agtattAGTAGTAGCTAATACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 486369 176 - 205426864 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgct-gttact-gggagggagtattgaggaaatgcatgcgaggtgttt-ccatgattcctggcacggag--caagtgctcagtaattgtcagctgtg-agtattAGTAGTAGCTAATACA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41548 177 - 837792 TCCACTGGAGTGCCTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTCCGTGCC-gttact-gggagggagaattgaggaaatgcatgtgaggtgcttcccatgattcctggcacagag--caagtgctcagtaattgtcagctgtg-agtattAGTAGTAGCTAATACA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771389 176 + 123690457 TCcactggagtgc-ttggggcctgcctgga-ttctagtcctggctctaccaGGTTTGTGTcctcgcc-gttact-gggagggagtattgaggaaatgcatgcgaggtgcttcccgtgattcctggcacagag--caagtgctcagtaattgtcagctgtg-agtattAGTAGTAGCTAATACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244154 176 + 180051392 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgct-gttact-gggagggaatattgaggaaatgcatgcgaggtgcttcccgtga-tcctggcacggag--caagtgctcagtgactgtcagctgcg-attattAGTAGTGGCTAATACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965260 177 - 181584905 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgct-gttactgggggggggatattgaggaaatgcatgcgaggtgcttcccgtga-tcctggcatggag--caagtgctcagtgactgtcagctgcg-attattAGTAGTGGCTAATACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65120 178 - 100774 TCCACTGGAGTGCTTTGGGGCCTGCCTGGATTTCCAGTCCTGGCGTCTACAGTTTTGTGTCCTCGCCAGTTACT--GGGAGGAATATTGA-GAAATGCATGCGATGTGTTCCCGTGGA-TCCTGGCACGGAGGCCAAGTG-TCAGTGACTGTCAGCTGCGCATTATTAGTAGTGGCTAATACA i macNem1.NW_012013899v1 I 38 I 16 s chlSab2.chr4 89535170 176 - 91010382 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgct-gttact-gggagggaatattgaggaaatgcatgcgaggtgcttcccgtga-tcctggcacggag--cgagtgctcagtgactgtcagctgcg-attattAGTAGTGGCTAATACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138803 176 + 6207128 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgcc-gttact-gggagggaatattgaggaaatgcatgcgaggtgcttcctgtga-tcctggcacggag--caagtgctcagtgactgtcagctgcg-attattAGTAGTGGCTAATACA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42618 176 + 514179 TCCACTGGAGTGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTCCTTGCC-gttact-gggagggaatattgaggaaatgcatgcgaggtgcttcccgtga-tcctggcacggag--caagtgctcagtgactgtcacctgca-gttattAGCAGTGGCTAATACA i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143624 177 - 16417988 TCCAGTGGGGGGCTTTGGGGCCTGCCTGGA-TTCCAGTCCTGGCTCTACCAGTTTTGTGTCCTCACC-GTTACT-GGGAGGGAATATTGAGGAGAAGCATGCGAGGTGTTCCCCGTAATTCCCGGCACAGGG--CGAGTGCTCAGTAATTGTCAGCTGTA-ATTTGTAGTAGTAGCTAAGACA i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=45343.000000 s hg38.chr3_KI270779v1_alt 8591 12 + 205312 CTACTACTATTC s panTro5.chr3 199991477 12 + 202621043 CTACTACTATTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 486545 12 - 205426864 CTGCTACTATTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41725 12 - 837792 CTACTACTATTC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771565 12 + 123690457 CTACCATTATTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244330 12 + 180051392 CGACCACTGTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965437 12 - 181584905 CGACCACTGTTC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89535346 12 - 91010382 TGACCACTGTTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138979 12 + 6207128 CGACCACTGTTC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42794 12 + 514179 CGACCACTGTTC i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143801 12 - 16417988 CTACCACTATTC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 65298 16 - 100774 I e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=301277.000000 s hg38.chr3_KI270779v1_alt 8603 64 + 205312 TTGGCTAAC-AAGCCAGCTCAAAGCTTTGATGG-TTTTCCATTACCTG--ATGAT-GGTGATGATGGTT s panTro5.chr3 199991489 64 + 202621043 TTGGCTAAC-AAGCCAGCTCAAAGCTTTGATGG-TTTTCCATTACCTG--ATGAT-GGTGATGATGGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 486557 64 - 205426864 TTGGCTAAC-AAGCCAGCTCAAAGCTTTGATGG-TTTTCCATTACCTG--ATGAT-GGTGATGATGGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41737 63 - 837792 TTGGCTAAC-AAGCCAGCTCAAAGCTTTGATGG-TTTTCCATTACCTG--ATGAT-GGTGATGAT-GTT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771577 63 + 123690457 TTGGCTAAG-AAGCCAGCTCAAAGCTTTGATGG--TTTCCATTACCTG--ATGAT-GGTGATGATGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244342 61 + 180051392 TTGGCCAAC-AAGCCCGCTCAAAGCTTTGATGG-TTTTCCGTCACCTA--ATGAT-GGTGATGGTT--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965449 64 - 181584905 TTGGCCAAC-AAGCCCGCTCAAAGCTTTGATGG-TTTTCCGTCACCTA--ATGAT-GGTGATGATGGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65314 69 - 100774 TTGGCCAACGAAGCCCGCTCAGAGCTTTAATGGTTTTTCCGTCACCTGGTATGATAGGTGATGATGATT i macNem1.NW_012013899v1 I 16 I 37 s chlSab2.chr4 89535358 61 - 91010382 TTGGCCAAC-AAGCCTGCTCAAAGCTTTGATGG-TTTTCCGTCACCTA--ATGAT-GGTGATGGTT--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6138991 61 + 6207128 TTGGCCAAC-AAGCCCGCTCAGAGCTTTAATGG-TTTTCCATCACCTA--ATGAT-GGTGATGGTT--- i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42806 64 + 514179 TTGGCCAAC-AAGCCCGCTCAAAGCTTTGATGG-TTTTCCGTTACCTA--ATGAT-GGTGATGATGGTT i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143813 64 - 16417988 TTGGCTAAC-AAGCCAGCTCAAATCTTTGATGG-TGTTCCATTACCTA--ATGAT-GGTGATGATGGTT i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=235275.000000 s hg38.chr3_KI270779v1_alt 8667 55 + 205312 TCCACTTCCTGAACACTCACACCCCTGGGCTAGGCACTTAACCCAAATCCAAGGT s panTro5.chr3 199991553 54 + 202621043 TCCACTTACTGAACACTCACA-CGCTGGGCTAGGCACTTAACCCAAATCCAAGGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 486621 54 - 205426864 TCCACTTACTGAACACTCACA-CGCTGGGCTAGGCACTTAACCCAAATCCAAGGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 41800 54 - 837792 TCCACTTACTCAACACTCACA-CGCTGGGCTAGGCACTTAACCCAAATCCAAGGT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771640 55 + 123690457 TCCAGGTACTGAACGCTCACACCGCTGGGCTAGGCGCTTAACCCAAATCCAAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244403 54 + 180051392 TCCACTTACTGAACACTCACA-TGCTGGGCTAGGCACTTAACCCAAATCCAGGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965513 54 - 181584905 TCCACTTACTGAACACTCACA-TGCTGGGCTAGGCACTTAACCCAAATCCAGGGT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89535419 54 - 91010382 TCCACTTACTGAACACTCACA-TGCTGGGCTAGGCACTTAACCCAAATCCAGGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139052 54 + 6207128 TCCACTTACTGAACACTCACA-TGCTGGGCTAGGCACTTAACCCAAATCCAGGGT i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42870 54 + 514179 TCCACTTACTGAACACTCACA-CGCTGGGCTAGGCGCTTCACCCAAATCCAGGGT i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143877 50 - 16417988 TCCACTTTCTGAGCACT-----CACTGGGCCAGGCACTTAACCCTAATCCAAGAT i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 65383 37 - 100774 I e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=935585.000000 s hg38.chr3_KI270779v1_alt 8722 185 + 205312 CAGCGTTATTgtttggaggt--gggggagacacctcctgctctgactcgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgccccagttcagctggtcctcaaagcgtatata---gctc----tttaaccctcagcaagtgtcagtcagaacataatcttgatttcagctgctactaaatat s panTro5.chr3 199991607 185 + 202621043 CAGCGTTATTGTTTgggggt--gggggagacacctcctgctctgactcgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgcccaagttcagctggtcctcaaagcatatata---gctc----tttaaccatcagcaagtgtcagtcagaatgtaatcttgatttcagctgctactaaatat i panTro5.chr3 C 0 C 0 s panPan2.chr3 486675 185 - 205426864 CAGCATTATTGTTTGGGGGT--TGGGGAGACACCTCCTGCTCTGACTTGTGTGTTTGGGTTCCCGTATTTTCACCAGAGGGTGTTAGTCCTGCCCCAGTTCAGCTGGTCCTCAAAGTGTATATA---GCTC----TTTAACCATCAGCAAGTGTCTATCAGAACATAATCTTGATTTCAGCTGCTACTAAATAT i panPan2.chr3 C 0 M 2555 s gorGor5.CYUI01015777v1 41854 184 - 837792 CAGCATTATTGTTTgg-ggt--gggggagacacctcctgctctgactcgtgtgtttggattcctgtattttcaccagagggcattagtcctgccccagttcagctggtcctcaaagcatatata---gctc----tttaaccatcagcaagtgtcagtcagaacataatcttgatttcagctgctactaaatat i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771695 186 + 123690457 CAGCATTATTGTTTGGGGTTC-GGGGGAGACAcctcctgctctgacttgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgccccagttcagctggtcctcaaagcatatgta---gctc----ttgaaccatcagcaagtgtcagtcagaacatcatcttgatttcagctggtactaaatat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244457 186 + 180051392 CAGCATTATTgtttgggggtg-ggggcagacacctcctgctctgacttgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgccccacttcagctggtcctcaaagcatatata---gctc----tttaatcatcagcaagtatctatcagaacataatgttgatttcagctgctactaaatat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965567 187 - 181584905 CAGCATTATTGTTTGGGGGTTGGGGGCAGACACCTCCTGCTCTGACTTGTGTGTttgggttcccatattttcaccagagggtgttagtcctgccccacttcagctggtcctcaaagcatatata---gctc----tttaataatcagcaagtatctgtcagaacataatgttgatttcagctgctactaaatat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65420 187 - 100774 CAGCATTATTGTTTGGGGGTT-GGGGCAGACACCTCCTGCTCTGACTTGTGTGTTTGGGTTCCCGTATTTTCACCGGAGGGTGTTAGTCCTG-CCCACTTCAGCTGGTCCTCAAAGCAGATCTATAGACTC----TTTAATCATCAGCAAGCTATCGTCAGAACATAATGTTGGTTTCAGCTG-TACTAAATAT i macNem1.NW_012013899v1 I 37 C 0 s chlSab2.chr4 89535473 186 - 91010382 CAGCATTATTGTTT-GGGGTTGGGGGCAGACACCTCCTGCTCTGACTTGTGTGTttgggttcccgtattttcaccagagggtgttagtcctgccccacttcagctggtcctcaaagcatatata---gctc----tttaatcatcagcaagtatctgtcagaacataatgttggtttcagctgctactaaatat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139106 187 + 6207128 CAGCATTATTGTTTGGGGGTTGGGGGCAGACACCTCTTGCTCTGACTTGTGTGTttgggttcccatattttcaccagagggtgttagtcctgccccacttcagctggtcctcaaagcacatata---gctc----tttaatcatcagcacgtatctgtcagaacataatgttggtttcagctgctactaaatag i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 42924 186 + 514179 CAGCATTATTgtctgggggtg-ggggcagacacctcctgctctgacttgtgtgtttgggttcccgtattttccccagagggtgttagtcctgctccacttcagctggtcctcaaagcatatata---gctc----tttaatcatcagcaagtatctgtcagaacataatgttgatttcggctgctactaaatat i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 143927 184 - 16417988 ---CATTATCGTTTGGGGGTGGGGAGAGGAGACACCCCGCCCTGACTTGTTTGTttgagttcctgtattctgaccagaggg--tcagtcctgccccagttcagctggtccttaaagc--atata---gctctttatttaaccattagcaagtatctgccagaacataatcttgatctcagccactgctacatat i saiBol1.JH378155 C 0 C 0 e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=544176.000000 s hg38.chr3_KI270779v1_alt 8907 128 + 205312 ctaccaggagcctgct--t---gagagagagaattg---cctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctggct-taacccaagctgtgtatggggaccctctcacc-gtggt-----cccaa s panTro5.chr3 199991792 128 + 202621043 ctaccaggagcctgct--t---gagagagagaattg---cctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctgact-taacccaagctgtgtatcgggaccctctcacc-atggt-----cccaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42038 128 - 837792 ctaccaggagcctgct--t---gagagagagaattg---cctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctggct-taacccaagctgtgtatcgggaccctctcacc-gtggt-----cccaa i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120771881 128 + 123690457 ctaccaggagcctgct--t---gagagagagaattg---cctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctggct-taacccaagctgtgtatggggaccctctcacc-gtggc-----cccaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244643 127 + 180051392 ctaccaggagcctgct--t---gagagagagaattg---cctgacaggtgctgagtcccccattcctgagatactttgaaatgagtgtctggct-taacccaagctgtgcatcggga-cctctcact-gtgtt-----cccaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965754 127 - 181584905 ctaccaggagcctgct--t---gagagagagaattg---cctgacaggtgctgagtcccccattcctgagatactttgaaatgagtgtctggct-taacccaagctgtgcatcggga-cctctcact-gtgtt-----cccaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65607 139 - 100774 CTACCA-GAGCCTGCT--TAACGAGAGAGAGAATTGGCTGCTGACAGTTGCTGAG-CCCCCATTTCTGAGATACTTGAAATGGAGTGTCTGGCTGTTAACCAAGCTGTGCATCGGGACCCTCTCACTAGTGTTTTTTCCCCAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89535659 127 - 91010382 ctaccaggagcctgct--t---gagagagagaattg---cctgatgggtgctgagtccaccattcctgagatactttgaaatcagtgtctggct-taacccaAGCTGTGCATGGGGA-CCTCTCACT-GTGTT-----CCCAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139293 129 + 6207128 ctaccaggagcctgcttgt---gagagagagaattg---cctgacaggtgctgagtcccccattcctgagatactttgaaatgagtgtctggct-taacccaagctgtgcatcggga-cctctcact-gtgtt-----cccaa i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 43110 127 + 514179 ctaccaggagcctgct--t---gagagagagaattg---tctgacgagtgctgagtccaccattcctgagatactttgaaatcagtgtctggct-taacccaagctgtgcatcagga-tctctcact-gtgtt-----cccag i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 144111 128 - 16417988 cttccaggagcctgct--t---gagagagagaattg---cctgaagggttctgagtccaccatttcggagatactttgaaatcagtgtctggct-taacccaagctgtgtattgggaccCTCTCACC-GTGGT-----CCCAA i saiBol1.JH378155 C 0 I 295 e panPan2.chr3 486860 2555 - 205426864 M e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=95128.000000 s hg38.chr3_KI270779v1_alt 9035 23 + 205312 tggagtcgcttttGTTAGGCGCC s panTro5.chr3 199991920 23 + 202621043 tggagtcgcttttGTTAGGCGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42166 23 - 837792 tggagtcgcttttGTTAGGCGCC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772009 23 + 123690457 tggagtcactttacttaggcgcC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244770 23 + 180051392 tggagtcacttttCTTAGGCACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965881 23 - 181584905 tggagtcacttttCTTAGGCACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65746 22 - 100774 TGGAGTCACTTTTCTTAGGCA-C i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89535786 23 - 91010382 TGGAGTCACTTTTCTTAGGCACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139422 23 + 6207128 cagaatcacttttCTTAGGCACC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 43237 23 + 514179 tggagtcacttttCTTAGGCACC i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 144534 23 - 16417988 TGGAGTCACTTTTCTTAAGCATC i saiBol1.JH378155 I 295 C 0 e panPan2.chr3 486860 2555 - 205426864 M e calJac3.chr2 181728 1023 - 204313951 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=781781.000000 s hg38.chr3_KI270779v1_alt 9058 173 + 205312 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GCAGGATGAA---GCCCCACTCGCCCTTCAGGAT-GC------------------AAAGCCCT-CCTCTATAAAGTGC-----ATGCGG-ggccagatgcagtggctcacgtctgacctcccaac-act---ttgggaggccgaggcagggggatc--------------gtttgag s panTro5.chr3 199991943 173 + 202621043 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCTTTTCATCTCT-----GCAGGATGAA---GCCCCACCCGCCGTACAGGAT-GC------------------AAAGCCCT-CCTCTATAAAGTGC-----GTGCGG-ggccagatgcagtggctcacgtctgacctcccaac-act---ttgggaggccgaggcagggggatc--------------gtttgag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42189 187 - 837792 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GCAGGATGAA---GCCCCACCGGCCGTACAGGAT-GC------------------AAAGCCCT-CCTCTATAAAGTGC-----GTGCGG-ggccagatgcagtggctcacgtctgacctcccaac-act---ttgggaggccgaggcagggggatcgcttgagcccaggagtttgag i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772032 188 + 123690457 CCCTTTTGCCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GCAGAATGAA---GCCCCACCTGCCCTTCAGGAT-GC------------------AAAGCCCC-CCTCTATAAAATGC-----GTGCAGTggccaggtgcagtggctcacgtctgacctcccaac-act---ttgggaggccgaggcaggggtatcgcttgagcccaggagtttgag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244793 186 + 180051392 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GTAGGATGAA---G-CCCACTTGCCCTTCAGGAT-GC------------------AAAGCCCT-CTTCTCTAAAATGC-----CTGCCG-ggccaggtgcagtggctcacgcctgacctcccaac-act---ttgggaggccgaggcagggggatcgcttgagcacaggagtttgag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179965904 186 - 181584905 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GTAGGATGAA---G-CCCACTTGCCCTTCAGGAT-GC------------------AAAGCCCT-CTTCTCTAAAGTGC-----CTGCCG-ggccaggtgcagtggctcacgcctgacctcccaac-act---ttgggaggccgaggcagggggatcgcttgagcacaggagtttgag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65768 197 - 100774 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCTTCGTGATAGTATGAAAGGG-CCCACTTGCCCTTCAGGATGGC------------------AAGGCCCT-CTTCTCTAAAGTGC-----CTGCCG-ggccaggtgcagtggctcacacctgacctcccaac-atctggttggatggccgcaggcaggggatcgc-tgagcacaggagtttgag i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89535809 186 - 91010382 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GTAGGATGAA---G-CCCACTTGCCCTTCAGGAT-GC------------------AAAACCCT-CTTCTCTAAAGTGC-----CTGCCG-ggccaggtgcagtggctcacgcctgacctcccaac-act---ttgggaggccaaggcagggggatcgcttgagcacaggagtttgag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139445 186 + 6207128 CCCCTTTACCTTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GTAGGATGAA---G-CCCACTTGCCCTTCAGGAT-GC------------------AAAGCCCT-CTTCTCTAAAGTGC-----CTGCTG-ggccaggtgcagtggctcacgcctgacctcccaac-act---ttgggaggccaaggcagggggatcgcttgagcacaggagtttgag i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 43260 186 + 514179 CCCCTTTACCGTGGGCTCTGAGCTTCCTCTGCCTTTCATCTCT-----GTAGGATGAA---G-CCCATGTGCCCTTCAGGAT-GC------------------AAAGCCCT-CTTCTCTAAAGTGC-----CTGCCG-ggccaggtgcagtggctcacgcctggcctcccaac-act---tcgggaggcagaggcagggggatcacttgagcacaggagtttgag i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 182751 196 - 204313951 CCCCTTTGCTTTGAGCTCTTAGCTTCCACTGCCTTTCATCTTT-----GTAGGATGAA---GCCCCACCCGCCCTTCAGGAT-Gccagccttggcaacattgtaagaccttgtttctacaaaaagtaaacaatat-t-agccaagtgtggtggtacatgcctatagtcctagctact----caggaggctgagataggaagatcacttgag-------------- i calJac3.chr2 I 1023 T 885 s saiBol1.JH378155 144557 154 - 16417988 CTCTTTTGCCTTGGGCTCTGAGCTTCCTCTTCCTTTCATCTCT-----GTAGAACGAA---GCCCCATCCACCCTTCAGGAT-GC------------------AAAGCCTT-CTTCTCTAAAGTGC-----ATGC-G-AGCCA-----GGCGAT-----------Gtcccaac-act-----ggggggccaaggcaggaggatcgcttgag-------------- i saiBol1.JH378155 C 0 I 14 e panPan2.chr3 486860 2555 - 205426864 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=189758.000000 s hg38.chr3_KI270779v1_alt 9231 41 + 205312 acca-gcctggacaacattgtgagaccctgttcctTGAATTG s panTro5.chr3 199992116 41 + 202621043 acca-gcctggacaacattgtgagaccctgttcctTGAATTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42376 41 - 837792 acca-gcctgggcaacattgtgagaccctgttcctTGAATTG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772220 41 + 123690457 acca-gcctgggcaacattgtgagaccctgttcctTGAATTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 244979 41 + 180051392 acca-gcctgggcaacattgtgaggccctgttcctTGAATTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179966090 41 - 181584905 acca-gcctgggcaacattgtgaggccctgttcctTGAATTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 65965 41 - 100774 accaggcctgggcaacgttgtgaggccctgttcc-tgaaTTG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89535995 41 - 91010382 acca-gcctgggcaacattgtgaggccctattcctTGAATTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139631 41 + 6207128 acca-gcctgggcaacattgtgaggccctgttcctTGAATTG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 43446 41 + 514179 acca-gcctgggcaacattgtgaggccctgttcctTGAATTG i colAng1.NW_012118799v1 C 0 C 0 s saiBol1.JH378155 144725 39 - 16417988 acca-gcctgggcaacattgtgaga--ctgtttctTGAATTG i saiBol1.JH378155 I 14 C 0 e panPan2.chr3 486860 2555 - 205426864 M e calJac3.chr2 182947 885 - 204313951 T e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=817563.000000 s hg38.chr3_KI270779v1_alt 9272 157 + 205312 CCC--TGGGAGATT-TCCTCAGCTTGTACT-GGAGGTGTGTGGCCCCATGAAGCCCATAGTCACCGTTCACCCTGAGAGACGCTGGCTTTGGGGCTGACACACCTGCTGCGGGGCAGCCCCAGGAGATGG--CCACCCTG--TTTCT-CCTGGAGCTGGAGCTGCG s panTro5.chr3 199992157 157 + 202621043 CCC--TGGGAGATT-TCCTCAGCTTGTACT-GGAGGTGTGTGGCCCCATGAAGCCCATAGTCACCGTTCACCCTGAGAGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGG--CCACCCTG--TTTCT-CCTGGAGCTGGAGCTGCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42417 157 - 837792 CCC--TGGGAGATT-TCCTCAGCTTGTACT-GGAGGCGTGTGGCCCCATGAAGCCCGTAGTCACCGTTCATCCTGAGAGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGG--CCACCCTG--TTTCT-CCTGGAGCTGGAGCTGCG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772261 156 + 123690457 CCC--TGGGAGATT-TCCTCAGCTTGTGCT-GGAGGCATGTGGCCCCATGAAGCCCGTAGTCACGGTTCACCCTGAGAGACGCTGGCTTTGGGGCTCACATGCCTGCTGT-GGGCAGCCCCAGGAGATGG--CCACCCTG--TTTCT-CCTGGAGCTGGagctgcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245020 158 + 180051392 CCC--TGGGACATT-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCCGAGGGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGG--CCGCCCTG--TTCCTCCCTGGAGCTGGAGCTGCA i rheMac8.chr6 C 0 I 1 s macFas5.chr6 179966131 158 - 181584905 CCC--TGGGACATT-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCCGAGGGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGG--CCGCCCTG--TTCCTCCCTGGAGCTGGAGCTGCA i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 66006 163 - 100774 CCCGGTGGGACATTGTCCTCAGCTTGTGCTGGGGGGCATGTGG--CCATG-AGCCGTTATCAACTGTCCACCCCGTAGGACGCTGGCTTTGGGGCTCACACCCTGCCTGCGGGGCAGCCCCAGGAGATGGGCCCGCCCTGGTTCCCTCCCTGGAGCTGGAGCTGCA i macNem1.NW_012013899v1 C 0 I 13 s chlSab2.chr4 89536036 158 - 91010382 CCC--TGGGAGATT-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCTGAGGGACGCTGGCTTTGGGGCTCACATGCCTGCTGCGGGGCAGCCCCAGGAGATGG--CCGCCCTG--TTCCTCCCTGAAGCTGGAGCTGCA i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012109696v1 6139672 158 + 6207128 CCC--TGGGAGATT-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCTGAGGGACGCTGGCTTTGGGGCTCACACACCTGCTGCAGGGCAGCCCCAGGAGATGG--CCGCCCTG--TTCCTCCCTGGAGCTGGAGCTGCA i manLeu1.NW_012109696v1 C 0 I 1 s colAng1.NW_012118799v1 43487 158 + 514179 CCC--TGGGAGATT-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCTGAGGGACGCTGGCTTTGGGGCTCACACGCCTCCCGCGGGGCAGCGCCAGGAGATGG--CCGCCCTG--TTCCTCCCTGGAGCTGGAGCTGCG i colAng1.NW_012118799v1 C 0 I 1 s calJac3.chr2 182062 158 - 204313951 CCT--TGGGAGGTT-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCTGTAGTCACTGTGGACCCTGAGAGATGCTGGCTTTGTGGCTCACGCGCCTGCTGTCGCGCAGCCCCAGGAGATGG--CCGCCCTG--TTTCTCCCTGGAGCTGGAGCTGCG i calJac3.chr2 T 885 C 0 s saiBol1.JH378155 144764 158 - 16417988 CCC--TGGAAGGTC-TCCTCAGCTTGTGCT-GGGGGCATGTGGCCCCATGAAGCCTGTAGTCACCGTGGACCCTGAGAGACGCTGGCTTTGTGGCTCACACGCCTGCTGTGGGGCAGCCCCAGGAGATGG--CAGCCCTG--TTTCTCCCTGGAGCTGGGGCTGTG i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 486860 2555 - 205426864 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=43394.000000 s hg38.chr3_KI270779v1_alt 9429 12 + 205312 CGTCTTCTCAGA s panTro5.chr3 199992314 12 + 202621043 CGTGTTCTCAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42574 12 - 837792 CGTGTTCTCAGC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772417 12 + 123690457 cgtcttctcagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245179 12 + 180051392 TGTGTGCTCAGC i rheMac8.chr6 I 1 C 0 s macFas5.chr6 179966290 12 - 181584905 TGTGTGCTCAGC i macFas5.chr6 I 1 C 0 s chlSab2.chr4 89536195 12 - 91010382 TGTGTGCTCAGC i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012109696v1 6139831 12 + 6207128 TGTGTGCTCAGC i manLeu1.NW_012109696v1 I 1 C 0 s colAng1.NW_012118799v1 43646 12 + 514179 TGTGTTCTCAGC i colAng1.NW_012118799v1 I 1 C 0 s calJac3.chr2 182220 12 - 204313951 TGAGTTCTCAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 144922 12 - 16417988 CGTGGTCTCAGC i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 486860 2555 - 205426864 M e macNem1.NW_012013899v1 66169 13 - 100774 I e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=381632.000000 s hg38.chr3_KI270779v1_alt 9441 78 + 205312 AACTGTGGTGGCTGTCctg--ttttgtttgcatcttat-aaacc-tttacctgattacattttcctcttcaatttagctgct s panTro5.chr3 199992326 78 + 202621043 AACTGTGGTGGCTGTCctg--ttttgtttgcatcttgt-aaatc-tttacctgattacatttgcctcttcaatttagctgct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 42586 78 - 837792 AACTGTGGTGGCTGTTctg--ttttgtttgcatcttat-aaacg-tttacctgattacattttcctcttcaatttagctgct i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772429 79 + 123690457 aaccgtggtggcttttctg--ttttatttacatcttat-aaaccatttacccgattacattttcctcttcaatttagctgct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245191 79 + 180051392 AGCTGTGGTGGCTGTTctg--ttctgtttgcgtcttat-aaaccatttacctgattacattttcctcttcaatttagctgct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179966302 79 - 181584905 AGCTGTGGTGGCTGTTCTG--TTCTGTTTGCGTCTTAT-AAACCATTTACCTGATTACATTTTCCTCTTCAATTTAGCTGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66182 81 - 100774 AGCTGTGGTGGCTGTTCTGTTTTCTGTTTGCGTCTTATAAAACCATTTACCTGA-TACATTTTCCTCTTCAATTTAGCTGCT i macNem1.NW_012013899v1 I 13 C 0 s chlSab2.chr4 89536207 79 - 91010382 AGCTGTGGTGGCTGTTCTG--TTCTGTTTGCATCTTAT-AAGCCATTTACCTGATTACAGTTTCCTCTTCAATTTAGCTGCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139843 79 + 6207128 AGCTGTGGTGGCTGTTctg--ttctgtttgcgtcttat-aaaccatttacctgattacattttcctcttcaatttagctgct i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 43658 79 + 514179 AGCTGTGGTGGCTGTTctg--ttttgtttgcatcttat-aaaccgtttacctgattacagtttcctcttcaatttagctgct i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 182232 68 - 204313951 AGCTGTGGTAGCTGTTCTG-------TTTGCATCTTAT-AAAC------CCTGATTACATTTTCATCTTCAATTTCGCTGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 144934 74 - 16417988 AGCTGTGgtagctgttctg-------tttgtgtcttat-aaaccctttacctgattacattttcctcttcagtttcgctgct i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 486860 2555 - 205426864 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=2769831.000000 s hg38.chr3_KI270779v1_alt 9519 516 + 205312 agaaaacttaaagtcagattggtggctcaccAGTAATGAGAGTTTA-GAG---TAGAGGTAAA--CTTTATGACATAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGA-TTCACATTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTCCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGG-TTTCTGGTCCATCTCATA-GCCTCAGGCAGTGGGC---GGTGCTGTCC--GTGCTCCCTTTCTGGGTTACCTGTGGTAGCTCTG------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATTTAGTACACCGTGT---TTCTGTTGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCAT-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACCT-CTGCCTGGTGGCATCCTACTGGATGTCTCAGCT-GAGCCACTCTGTTCTGAAGATG--CCCTTGTCCTCCACCCCT--TTGCTTTGGGCTCTGA--GCTTCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA s panTro5.chr3 199992404 514 + 202621043 agaaaacttaaagtcagattggtggctcgccAGTAATGAGAGTTTA-GAG---TAGAGGTAAA--CTTTATGACATAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGG-TTCACATTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTCCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGG-TTTCTGGTCCATCTTATA-GCCTCAGGCAGTGGGT---GGTGCTGTCC--GTGCTCCCTTTCTGGGTTACCTGCGGTAGCTCTG------------------------------------------------------------------------------------AAGT-TGCGGGGC-TGTGATTTGAAGCCTGATTTAGTACACCGTGT---TTCTGTTGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCAT-TCACC--GTGGCCC-TGTGTTTTTCCACCACACCT-CTGCCTGGTGGCATCCTACTGGATGTCTCAGCT-GAGCCACTCTGTTCTGAAGATG--CCCTTGTCCTCCACCCCT--TTGCTTTGGGCTCTGA--GCTTCTTCTGCCTTTCAT--CTCTGTAGGG-TGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 489415 516 - 205426864 AGAAAACTTAAAGTCAGATTGGTGGCTCGCCAGTAATGAGAGTTTA-GAG---TAGAGGTAAA--CTTTATGACATAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGG-TTCACATTTACTTTATTTTGCTGTACTGTGATTGTCTCT-GTGTTCCCTGAATTCTTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGG-TTTCTGGTCCATCTCATA-GCCTCAGGCAGTGGGC---GGCGCTGTCC--GTGCTCCCTTTCTGGGTTACCTGCGGTAGCTCTG------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATTTAGTACACCGTGT---TTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCAT-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACCT-CTGCCTGGTGGCATCCTACTGGATGTCTCAGCT-GAGCCACTCTGTTCTGAAGACG--CCCTTGTCCTCCACCCCT--TTGCTTTGGGCTCTGA--GCTTCTTCTGCCTTTCAT--CTCTATAGGA-TGAA i panPan2.chr3 M 2555 M 1251 s gorGor5.CYUI01015777v1 42664 516 - 837792 agaaaacttaaagtcagattggtggcttgccAGTAATGAGAGTTTA-GAG---TAGAGGTAAA--CTTTATGACATAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGA-TTCACATTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTTCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGG-TTTCTGGTCCATCTCATA-GCCTCAGGCAGTGGGC---GGTGCTGTCC--GTGCTCCCTTTCTGGGTTACCTGTGGTAGCTCTG------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATTTAGTACACCGTGT---TCCTGTTGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCAT-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACCT-CTGCCTGGTGGCATCCTACTGGGTGTCTCAGCC-GAGCCACTCTGTTCTGAAGAAG--CCCTTGTCCTCCACCCCT--TTGCTTTGGGCTCTGA--GCTGCTTGTGCCTTTCAT--CTCTGTAGGA-TGAA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120772508 507 + 123690457 agaaaatttaaagtcaggttggtggctcgccagtaatgagagtt---------tagaggtaaa--ctttatgacatAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGA-CTCACAGTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTCCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGG-TTTCTGGTCCATCTCGTA-GCCTCAGGCAGTGGGC---GGTGCCATC----TGCTCCCTTTCTGGGTTACCTGTGGTAGCTCTC------------------------------------------------------------------------------------AAGT-TGCGGGGC-TGCGATTTGAAGCCTGATTTAATACACGGTGT---TTCTGTCGTGTTCGGTGGTGGTTTGCTCCTCACGTGTGAGCAT-TCACCCCGTGGCCC---TGTTTCTCCACCGCACCT-CTGCCTGGTGGCCTCCTACTGGATGTCTCAGCC-GAGCCACTCTGTTCTGAAGACG--CCCTTGTCCTCCACCCCT--TTGCTTTGGGCTCTGA--GCGTCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245270 507 + 180051392 agaaaatttaaagtccggttggtggctcgccAGTAATGAGAGTTTA-CAG---TAGAGGTAAA--CTTTATGAC--AGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGG-TTAACATTTACTTTATTTTGCTGTACTG----TGTCTTT-GTGTTTCCTGAGTTCCTTCTGGAATAAGGCGGGTCATTAGTGAGCACAGG-TTTCTGGTCG-TCTCACA-GCCTCAGGCAGTGGGC---GGTGCTGTCC--GTGCTCCCTTTCCG-GTTGCCTGTGGTAGCTCTC------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATGTAGTGCACCGTGT---TTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACGTGTGAGCAT-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACCT-CTGCCTGGTGGCATCCTGCTGGATGTCTCAGCC-GAGTCACTCTGTTCTA--GATG--CCCTTGTCCCCAACCCCT--TTGCTCTGGGCTCTGA--GCTGCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179966381 507 - 181584905 GGAAAATTTAAAGTCTGGTTGGTGGCTCGCCAGTAATGAGAGTTTA-GAG---TAGAGGTAAA--CTTTATGAC--AGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGG-TTAACATTTACTTTATTTTGCTGTACTG----TGTCTTT-GTGTTTCCTGAGTTCCTTCTGGAATAAGGCGGGTCATTAGTGAGCACAGG-TTTCTGGTCG-TCTCACA-GCCTCAGGCAGTGGGC---GGTGCTGTCC--GTGCTCCCTTTCCG-GTTGCCTGTGGTAGCTCTC------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATGTAGTGCACCGTGT---TTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACGTGTGAGCAT-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACCT-CTGCCTGGTGGCATCCTACTGGATGTCTCAGCC-GAGCCACTCTGTTCTG--GATG--CCCTTGTCCCCAACCCCT--TTGCTCTGGGCTCTGA--GCTGCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66263 526 - 100774 AGAAAATTTAAAGTCCTGTTGCGTGCTTGC--ATAATGAGAGGTTACGAG---TAGAGGTAGAACTTCTATGAC--AGTCTTAGACCTCTTCACTTTCTCCTCAGCCAAGGTGGTTTAACATTTACTTTATTTTGCTGTACTG----TGTTTTA-GTGTTTTCTGAGTTTCTTCTGGAATA--GCGGGTCATTAGTGAGCACAGGTTTTCTGGTCGTTCTCACAGGCCTCAGGCAGTGGGC---GGTGCTGTCCGAGTGCTCCCTTTCCGCGTTGCCTGTGGTA-CTCTC------------------------------------------------------------------------------------AAGTCTGCAGGGCTTGCGA-TTGAAGCCTGATGTAGTGCACCGTGTTTATTCTGTCGTGTTCTGT--TGGTTTGCTCCTCACGTGGAGCCATGTCACCCTGTGGCCCTTGTGTTTTTCCACCACACCGACTGCCT-GTGGCATGCCTATGGATGTCTCAGCCGGAGCCACTCTGTTCTG--GATGGTCCCTTGTCCCCAACCCCTACTTGCTCTGGGCTCTGAGCGCTGCTTCTGCCTTTCATTCTCTTGTAGGATTGAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89536286 509 - 91010382 AGAAAATTTAAAGTGCGGTTGGTGGCGCGCCAGTAATGAGAGTTTA-GAG---TAGAGGTAAA--CTTTGTGACAGAGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGG-TTAACATTTACTGTATTTTGCTGTACTG----TGTCTTT-GTGTTTCCTGAGTTCTCTCTGGAATAAGGCAGGTCATTAGTAAGCACAGG-TTTCTGGTCG-TCTCACA-GCCTCAGGCAGTGGGC---GGTGCTGTCC--GTGCTCCCTTTCTG-GTTGCCGGTGGTAGCTCTC------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATTCAGTGCACCGTGT---TTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACGTGTGAGCAG-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACCC-CTGCCTGGTGGCATCCTACTGGATGTCTCAGCC-GAGCCACTCTGTTCTG--GATG--CCCTTGTCCCCAACCCCT--TTGCTCTGGGCTCTGA--GCTGCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6139922 506 + 6207128 agaaaatttaaagtccagttggtggctcgccAGTAATGAGAGTTTA-CAG---TGGAGGTAAA--CTTTATGAC--AGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGG-TTAACATTTACTTTATTTTGCTGTGCTG----TGTCTTT-GTGTTTCCTGAGTTCCTTCTGGAATAAGGCAGGTCATTAGTGAGCACAGG-TTTCTGGTCG-TCTCACA-GCCTCAGGCAGTGGGC---GGTGCTGTCC--GTGCTCCCTTTCCG-GTTGCCTGTGGTAGCTCTC-------------------------------------------------------------------------------------AGT-TTCAGGGC-TGCGAGTTGAAGCCTGATGTAGTGCACCGTGT---TTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCGT-TCACCCTGTGGCCC-TGTGTTTTTCCACCACACGT-CTGCCTGGTGGCATCCTACTGGATGTCTCAGCC-GAGCCACTCTGTTCTG--GATG--ACCTTGTCCCCAACCCCT--TTGCTCTGGGCTCTGA--GCTGCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012118799v1 43737 502 + 514179 agaaaagttaaagtccggttggtggctcgccAGTAATGAGAGTTTA-GAG---TGGAGGTAAA--CTTTATGAC--AGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGG-TTAACATTTACTGTATTTTGCTGTACTG----TGTCTTT-GTGTCTCCTGAGTTCCTTCTGGAATAAGGCAGGTCATTCGTAAGCGCAGG-TTTCTGGTCG-TCTCACA-GCCTCAGGCAGTGGAT---GGTGCTGTCG--GTGCTCCCTTTCCG-GTTGCCTGTGGTAGCTCTC------------------------------------------------------------------------------------AAGT-TGCAGGGC-TGCGATTTGAAGCCTGATTCAGTGCACTGTGT---TTCTGTCGTGTTCTGTGGCGGTTTG-TCCTCACATGTGAGCAT-TCACCCTGTGGCCC-TGTG-TTTTCCACCACACCT-CTGCCTGCTGGCATCCTACTGGATGTCTCAGCC-GAGCCA--CTGTTCTG--GATG---CCTTGTCCCCAACCCCT--TTGCTTTGGGCTCTGA--GCTTCTTCTGCCTTTCAT--CTCTGTAGGA-TGAA i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 182300 504 - 204313951 AAAACATTTAACGTCAGATATGTGGCTCACCAGTAATGAGAGTTCA-GAGTTTTCGAGGTAAA--CT-TGTGACATGGTCTTAA--CGCTTCACGTTCCCCTTAGGGAACGCAA-TTAAGAGGTGCTTCATTTTGCTGCACTGTGAAAGTCTTTCATGTTTCCTGAATTCCTTCTGAAATGAGGCCAGCTGCTAGTGAGTACAGG-TTTCTGGTCCTTCTCACA-GCCTCGGGCAGTGGGCTGTGGTGCTGTCC--ATGCTCCCCTTCGGTGTTGCCTGTGGTAGCTCTC------------------------------------------------------------------------------------CAGC-TGC-GGGC-TGAGATCTGAAGCCTGATTTA---------GT---TTCTCTCATGTGCTATGGT-------TTCTCACATGTGAGCAT-ACACCCTGTGGCCC-TGTGTTTTCCCACCATACCT-CTGCCTGTTGGCATCCTACTGGATGTCTCAGCC-CAGACATTTTGTTCCTCAGATT--CCGTTGTCCCCCACCCCT--TTGCTTTGAGCTCTTA--GCTTCCACTGCCTTTCAT--CTTTGTAGGA-TGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 145008 597 - 16417988 aaaaaatttaaagtcaggtatgtggctcaccAGTAATGAGAGTTTG-GAATTTTTGAGGTAAA--CT-TAGGACATGGTATTAA--CTCTTCGCTTTCTTCTCAGCCAACACAA-TTAACAGGTACTTTATTTTGCTGTACTGTGAATGCCTTTCGTGTTTCCTGAATTCCTTCTGAAATGTGGCGGGTTGCGAGTGAGTACAGG-TTTCTGGTCCTTCTCACA-GCCTCAGGCAGTGGGCCGTGGCGCTGTCC--GTTCTCCCCTTCTGGGTTGTCCGTGGTGGCTCTCCAGCTGCGAGGCTGGGATCTGAAGCCTGATGCGCCACGTTTCTCTCCTGTTCTGTGCCTTTCTAGGTTGCCTGTGGTAGCTCTCCAGC-TGC-GGGC-TGAGATTTGGAGCCTTATTTAGTACACCATGT---TTCTCTCGTGTGCTGTGGT-------TTCTCACATGTGAGCAC-ACACCCCGTGGCCC-TGTGTTTTCCCACCACACCT-CTGCCTGTTGGCATCCTACTGGATGTCTCAGCC-CACCCATTTTGTTCCGAAGATT--CCCTTGTCCCCCACCCCT--TTGCTTTGAGCGCTTA--GCTTCCTCTGCCTTTCAT--CTTTGCAGGA-TGAA i saiBol1.JH378155 C 0 C 0 e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=203478.000000 s hg38.chr3_KI270779v1_alt 10035 35 + 205312 GCCCCACCCGCCCTTCAGGATGccagcc-ttggcaa s panTro5.chr3 199992918 35 + 202621043 GCCCCACCCACCCTTCAGAATGccagcc-ttggcaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43180 35 - 837792 GCCCCACCCACCCTTCAGGATGcctgcc-ttggcaa i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773015 35 + 123690457 GCCCCACCTGCCCTTCAGGATGccagcc-ttggcaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245777 35 + 180051392 GCCCCACCCACCCTTCAGGATGccagcc-ttggcaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179966888 35 - 181584905 GCCCCACCCACCCTTCAGGATGccagcc-ttggcaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 66789 36 - 100774 GCCCCACCCACCCttcaggatgccagccgttggcaa i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89536795 35 - 91010382 GCCGCACCCGCCCTTCAGGATGccagcc-ttggcca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6140428 35 + 6207128 GCCCCACCCGCCCTTCAGGATGCCAGCC-TTGGCAA i manLeu1.NW_012109696v1 C 0 M 1053 s colAng1.NW_012118799v1 44239 35 + 514179 GCCCTACCCGCCCTTCAGGATGccagcc-ttggcaa i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 182804 35 - 204313951 GCCCCACCCGCCCTTCAGGATGccagcc-ttggcaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 145605 35 - 16417988 GCCCCACCCACCCTTCAGGATGccagcc-ttggcaa i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 489931 1251 - 205426864 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=14758.000000 s hg38.chr3_KI270779v1_alt 10070 4 + 205312 catt s panTro5.chr3 199992953 4 + 202621043 cgtt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43215 4 - 837792 cgtt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773050 4 + 123690457 catt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245812 4 + 180051392 catc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179966923 4 - 181584905 catc i macFas5.chr6 C 0 I 293 s macNem1.NW_012013899v1 66825 4 - 100774 catc i macNem1.NW_012013899v1 C 0 I 2 s chlSab2.chr4 89536830 4 - 91010382 catc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 44274 4 + 514179 catc i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 182839 4 - 204313951 catt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 145640 4 - 16417988 catt i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 489931 1251 - 205426864 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=69286.000000 s hg38.chr3_KI270779v1_alt 10074 16 + 205312 gtgagaccct-gtttct s panTro5.chr3 199992957 16 + 202621043 gtgagaccct-gtttct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43219 16 - 837792 gtgagaccct-gtttct i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773054 16 + 123690457 gtgagagcct-gtttct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 245816 16 + 180051392 gtgagaccct-gtttct i rheMac8.chr6 C 0 I 318 s macFas5.chr6 179967220 16 - 181584905 gtgagaccct-gtttct i macFas5.chr6 I 293 C 0 s macNem1.NW_012013899v1 66831 17 - 100774 ccgagaccctggtttct i macNem1.NW_012013899v1 I 2 C 0 s chlSab2.chr4 89536834 16 - 91010382 gtgagaccct-gtttct i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 44278 16 + 514179 gtgagaccct-gtttct i colAng1.NW_012118799v1 C 0 C 0 s calJac3.chr2 182843 16 - 204313951 gtaagacctt-gtttct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 145644 16 - 16417988 gtaagacctt-gtttct i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 489931 1251 - 205426864 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=30922.000000 s hg38.chr3_KI270779v1_alt 10090 13 + 205312 acaa-aaagta---aac s panTro5.chr3 199992973 13 + 202621043 acaa-aaacta---aac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43235 13 - 837792 acaa-aaagta---aac i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773070 13 + 123690457 acaa-aaacga---aac i nomLeu3.chr11 C 0 I 2 s macFas5.chr6 179967236 13 - 181584905 acaa-aaagtc---aac i macFas5.chr6 C 0 I 12 s macNem1.NW_012013899v1 66848 14 - 100774 acaataaagtc---aac i macNem1.NW_012013899v1 C 0 I 13 s chlSab2.chr4 89536850 13 - 91010382 acaa-aaagcc---aac i chlSab2.chr4 C 0 I 12 s colAng1.NW_012118799v1 44294 13 + 514179 ccaa-aaagtc---aac i colAng1.NW_012118799v1 C 0 I 12 s calJac3.chr2 182859 16 - 204313951 acaa-aaagtaaacaat i calJac3.chr2 C 0 I 9 s saiBol1.JH378155 145660 13 - 16417988 acaa-aaagta---aat i saiBol1.JH378155 C 0 I 9 e panPan2.chr3 489931 1251 - 205426864 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I e rheMac8.chr6 245832 318 + 180051392 I a score=926719.000000 s hg38.chr3_KI270779v1_alt 10103 249 + 205312 gt-gtagtggtgcacgcctgtagttccagctactt-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccacggcactccagcctggg--agacagagcgaaaccccatctcaaaaa----------aacaaagaaaGTGGATGCGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCT-GATATGCGCCTTTTTCCTCATCGTGGGGGCTCAtgttttc s panTro5.chr3 199992986 249 + 202621043 gt-atagtggtgcacgcctgtagttccagctactt-gggaggctgagatgggaagatcacttcagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccacggcactccagcctggg--agacagagcgaaaccccatctcaaaaa----------aacaaagaaaGTGGATGCGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCT-GATGTGCGCCTTTTTCCTCATCGTGGGGGCTCAtgttttc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43248 248 - 837792 gt-gtagtggtgcacgcttgtagttccagctactt-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccacggcactccagcctggg--agacagagcgaaaccccacctcaaaaa----------aacaaagaaaGCGGATGCGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCT-GATGTGTGCCTTTTTCCTCACCGT-GGGGCTCATGTTTTC i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773085 249 + 123690457 gt-gtagtggtgcacgcctgcagtcccagctactt-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccactgcactctagcctggg--agacagaacgaaaccccatctcaaaaa----------aacaaagaaaGTGGATGTGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCT-GATGTGCGCCTTTTTCCTCACCGTGGGGGCTCATGTTTTC i nomLeu3.chr11 I 2 C 0 s rheMac8.chr6 246150 249 + 180051392 gt-gtggtggtgcacgcctgtagtcccagctactt-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccacagcactccagcctggg--agacagagcgaaaccctatctcaaaaa----------aacaaagaaaGTGGATGCGTGCTGCTCCTGCCATTGGGTCATCGCAGCATTTTTCTTTTCTCT-GATGCGCACCTTTTTCCTCATCGTGGGGTCTCAtgttttc i rheMac8.chr6 I 318 C 0 s macFas5.chr6 179967261 249 - 181584905 gt-gtggtggtgcacgcctgtagtcccagctactt-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccacagcactccagcctggg--agacagagcgaaaccctatctcaaaaa----------aacaaagaaaGTGGATGCGTGCTGCTCCTGCCATTGGGTCATCGCAGCATTTTTCTTTTCTCT-GATGCGCACCTTTTTCCTCATCGTGGGGTCTCAtgttttc i macFas5.chr6 I 12 C 0 s macNem1.NW_012013899v1 66875 252 - 100774 gtggtggtggtgccacgctgttatccaagctacttggggaggctgagatgggaagatcac-tgagcctgggagggttgagggctgcattgagctgagatcaa-------gccacagcactccagcctggggaggacagagcggaaacccatctc-aaaa----------aacaaagaaaGTTGATGCGTGTTGCTCCTGCCATTGGGTCATCGCAGCATTTTTCTTTTCTCTGGATGCGCACTTTTCTCATCAT--GGGGGTCTCATGTTTTC i macNem1.NW_012013899v1 I 13 C 0 s chlSab2.chr4 89536875 249 - 91010382 gt-gtggtggtgcacgcctgtagtcccagcttcct-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccactgcactccagcctggg--agacagagcaaaaccctatctcaaaaa----------aacaaagaaaGTGGATGTGTGCTGCCCCTGCCACTGGGTCATCGCAGCATTTTTCTTTTCTCT-GATGCGCACCTTTTTCCTCATCGTGGGGTCTCATGTTTTC i chlSab2.chr4 I 12 C 0 s colAng1.NW_012118799v1 44319 245 + 514179 gt-gtggtggtgcacgcctgttgtcccagctactt-gggaggctgagatgggaagatcacttgagcctggga-ggttga-ggctgcattgagctgagatcaa-------gccactgcactccagcctggg--agacagagcgaaaccctatctcaaaaa----------aacacagaaaGTGGA----TGCTGCTCCTGCCATTGGGTCATCGCAGCATTTTTCTTTTCTCT-GATGCGCACCTTTTTCCTCATCGTGGGGTCTCGTGTTTTC i colAng1.NW_012118799v1 I 12 M 2934 s calJac3.chr2 182884 232 - 204313951 gt-gtggtggtacatgcctatagtcctagctactc-aggaggctgagataggaagatcacttgagcctggga-ggtgga-ggctgcgctgagctgagatcagctgagcccccgccgtactccagcctggg--agacagagcgaaaccatggctcaGGGTGTACAGT---GACAGGCTTCATGAACACATGCTGCTCCTGCCGTGGGATCAT--CAGCGTTGTTCTTGTCTCC-GACGTGCCTTC----------------------------- i calJac3.chr2 I 9 C 0 s saiBol1.JH378155 145682 226 - 16417988 gt-gtggtggtgcacgcctatagtcctagctactc-aggaggct--gatgggaagatcacttgagcctggga-ggttga-ggctgcactgagctgagatcag-------tcctctgtactccggcctagg--agacggagcgaaaccctggctcGGGGTGTACCGTGACGACAGGCTTCGTGAACGCGCGCGGCTCCTGCCGTGGGGTTGT--GAGCATTGTTCTTTTCTTC-AGCAGGCCTCT----------------------------- i saiBol1.JH378155 I 9 C 0 e panPan2.chr3 489931 1251 - 205426864 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=431855.000000 s hg38.chr3_KI270779v1_alt 10352 152 + 205312 gtactt--ttctctcgctactagattgtgag-ctgcgtg-aaggaaggTTCATAGTCGTGTTGTATGTACAGGCACACAAAATTTGTGCTTGGATAGA----CACATATCAATCCGCTTCCTTCTCCTCTCTGAGTTTCTTT-----ATTT-AAA-AAAAAAAttag s panTro5.chr3 199993235 153 + 202621043 gtactt--tcctctcactactagattgtgag-ctgcgtg-aaggaaggTTCATAGTTGTGTTGTATGTACAGGCACACAAAATTTGTCCTTGGATAGA----CACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTT-----ATTTAAAA-AAAAAAAttag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43496 153 - 837792 GTAGTT--CCCTCTCGCTACTAGATTGTGAG-CTGCATG-AAGGAAAGTTCATAGTTGTGTTATATGTACAGGCACACAAAATTTGTCCTTGGATAGA----CACATATCAATCTGCTTCCTTCTCCTCTCTGAATTTCTTT-----ATTTAAAA-AAAAAAAttag i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773334 150 + 123690457 GTAGTT--CCCTCTCGCTACTAGATTGTGAG-CTGTGTG-GAGGAAGGTTCATAATTGTGTTGTATGTACAGACACACAAAATTTGTCCTTGGATAGA----CACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTT-----ATTTAAAA-AAAAAAag--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246399 148 + 180051392 atagtt--ccctctcactactggattgtgag-ctgcgtg-aaggaaggTTCATAGTTGTGTTGTATGTACAGGCACACAAAATTTGTCTTTGGACAGA----CACAT----ATCCACTTCCTTCTCCTCTCTGAATTTCTTT-----ATAT-GAA-AAAATAAttag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179967510 152 - 181584905 atagtt--ccctctcactactggattgtgag-ctgcgtg-aaggaaggTTCATAGTTGTGTTGTATGTACAGGCACACAAAATTTGTCTTTGGACAGA----CACATATCAATCCACTTCCTTCTCCTCTCTGAATTTCTTT-----ATAT-GAA-AAAATAAttag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67127 162 - 100774 ATAGTTTCCCTCTTCACTACTGGATTGTGAGACTGCGTGAAAGGAAGGTTCATAGTTGTGTTGTATGTAC-GACACAC-AAATTTGTCTTTGAGCCAAAGACCACACATCAATCCGTATCCTTCT-CTCTCTAAATTTCTTTGGATCATAT-AAA-AAAATAATTAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89537124 151 - 91010382 GTAGTT--CCCTCTCACTACTGGATTGTGAG-CTGCGTG-AAGGAAGGTTCATAGTTGTGTTGTATGTACAGGCACACACAATTTGTCTTTGGACAGA----CACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTT-----ATAT-AAA-AAAA-AAttag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183116 142 - 204313951 GTAGTT---CCTCTCGATGCTAGATTGTGAG-CTGGGTG-AGGGAAGGGTCGTAG-TGTGTTGTACATACAGGCACAC--AATTTGGCCTTGGATACA----GACATACCAGTTCGCTTCCTT---CTCTCTGAAtttcttt-----attt-aaa-aaatttag--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 145908 147 - 16417988 GTAGTT--CCCCCTTGCTACTAGGTTGTGAG-CTGTGTG-AGGGAAGGCTCGTAGTTGTGTTGTATGTACAGGCACACAAAATTTGGCCTTGGGTAGA----GACATACCAGTTCGCTTCCTT---CTCTCTGAATTTCTTT-----ATTT-AAACAAATGtac--- i saiBol1.JH378155 C 0 C 0 e panPan2.chr3 489931 1251 - 205426864 M e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=281055.000000 s hg38.chr3_KI270779v1_alt 10504 71 + 205312 a--gatggagtctcactgtcttgccc-aggctggtct-caaactcctaggctcaagcgatcctcccgcctc--------TACT s panTro5.chr3 199993388 71 + 202621043 a--gatggagtctcactgtcttgccc-aggctggtct-caaactcctaggctcaagcgatcctcccgcctc--------TACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 491182 71 - 205426864 a--gatggagtctcactgtcttgccc-aggctggtct-caaactcctaggctcaagcgatcctcccgcctc--------TACT i panPan2.chr3 M 1251 C 0 s gorGor5.CYUI01015777v1 43649 71 - 837792 a--gatggagtctcactgtcttgccc-aggctggtct-caaactcctaggctcaagtgatcctcccgcctc--------TACT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773484 71 + 123690457 a--gatggagtctcattgtcttgccc-aggctggtct-caaactcctaggcccaagcgatcctcccgcctc--------TACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246547 67 + 180051392 a--gatggagtctcactgtctttccc-aggctggtct-caaactcctaggctcaagtgatcgtcccgcctc------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179967662 67 - 181584905 a--gatggagtctcactgtctttccc-aggctggtct-caaactcctaggctcaagtgatcgtcccgcctc------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67289 73 - 100774 ATGGATgga-tctcactgtctttcccaaggctggtctccaaactcctaggctcaagcgatcg-cccgcctcacct-------- i macNem1.NW_012013899v1 C 0 I 34 s chlSab2.chr4 89537275 71 - 91010382 a--gatggagtctcactgtctttccc-aggctggtct-caaactcctaggctcaagcgatcgtcccgcctc----agcc---- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183258 71 - 204313951 a--gatggaatctcactgccttgccc-gggctggtcc-caaactcctaggctcaagcgatcctcccgcctc--------agcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146055 71 - 16417988 a--gacggaacctcactgccttgccc-aggctggtcc-caaactcctaggctcaagcgatcctcccgcctc--------agcc i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=105270.000000 s hg38.chr3_KI270779v1_alt 10575 45 + 205312 AATATGAATTATTAGCCTATACTAATATGAATTCCTATACTAATA s panTro5.chr3 199993459 45 + 202621043 AATATGAATTATTAGCCTATACTAATATGAATTCCTATACTAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 491253 45 - 205426864 AATATGAATTATTAGCCTATACTAATATGAATTCCTCTACTAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43720 45 - 837792 AATATGAATTATTAGCCTATACTAATATGAATTCCTATACTAATA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773555 44 + 123690457 AATATGAATTATTAGCCTGTACT-ATTTGAATTCCTATACTAATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246614 32 + 180051392 -------------agcctATACTAATATGAATTTCTCTACTAATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179967729 32 - 181584905 -------------agcctATACTAATATGAATTCCTCTACTAATG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89537346 34 - 91010382 -----------tcAGCCTATACTAATATGAATTCCTCTACTAATG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183329 34 - 204313951 -----------tcAGTGTATACATATATGAATTCCTATGTGAATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146126 34 - 16417988 -----------tcAGCCTATACTAATATGAATTCCTATGTGAATA i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 67362 34 - 100774 I e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=247833.000000 s hg38.chr3_KI270779v1_alt 10620 62 + 205312 TGATT-GAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA s panTro5.chr3 199993504 62 + 202621043 TGATT-GAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 491298 62 - 205426864 TGATT-GAAATTAGTTTGACTTGTATAATAATTCTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43765 62 - 837792 TGATT-GAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773599 62 + 123690457 TGATT-GAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246646 62 + 180051392 TGATT-GAAATTAGTGTGACTTCTATAAAAATTTTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179967761 62 - 181584905 TGATT-GAAATTAGTGTGACTTCTATAAAAATTTTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67396 65 - 100774 TGATTGGAGATTAGTGTGAGTTCTATGAATAATTGTTTCCCAG-ATTGGACTTCGTGTTCTTGATA i macNem1.NW_012013899v1 I 34 I 15 s chlSab2.chr4 89537380 62 - 91010382 TGATT-GAAATTAGTGTGACTTCTATAAAAATTGTTCTCCCAG-ATTGGGCTTC-TGTT-TTGATA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183363 62 - 204313951 TGATT-GAAATTAGTTTGACTTCTATAATAATTGTTCTCCCAGAATTGGGCTTC-TG-T-TTGATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146160 62 - 16417988 TGATT-GAAATTAGTTTGATTTCTAT-ATAATTGTTCTCCCAAAATTGGGCTTC-TGTT-TTGATA i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=43785.000000 s hg38.chr3_KI270779v1_alt 10682 12 + 205312 GTAGAACTAAAT s panTro5.chr3 199993566 12 + 202621043 GTAGAACTAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 491360 12 - 205426864 GTAGAACTAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43827 12 - 837792 GTAGAACTAAAT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773661 12 + 123690457 GTAGAACTAAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246708 12 + 180051392 GTAGAAGTAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179967823 12 - 181584905 GTAGAAGTAAAT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89537442 12 - 91010382 GTAGAAGTAAAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183425 12 - 204313951 GTAGAACTAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146222 12 - 16417988 GTAGAACGAAAT i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 67461 15 - 100774 I e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=760764.000000 s hg38.chr3_KI270779v1_alt 10694 194 + 205312 TATTAGGCTATTT-CAAGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACTTCAG-----TTAAA------TTT--GTGCTTCTGAGTGCTTGTATT------------------------------------------------------GTAGGTG-AAACCGCACTGAGAA---GGTATTT--GTGGCCCGTATGCT-GATTGATTGATGAGACT-TCTT-TGCACAGGAGAGCTGCTAAAAAT s panTro5.chr3 199993578 194 + 202621043 TATTAGGCTATTT-CAAGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACTTCAG-----TTAAA------TTT--GTGCTTCTGAGTGCTTGCATT------------------------------------------------------CTAGGTG-AAACCGCACTGAGAA---GGTATTT--GTGGCCCGTATGCT-GATTGATTGATGAGACT-TCTT-TGCACAGGAGAGCTGCTAAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 491372 194 - 205426864 TATTAGGCTATTT-CAAGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACTTCAG-----TTAAA------TTT--GTGCTTCTGAGTGCTTGTATT------------------------------------------------------CTAGGTG-AAATCGCACTGAGAA---GGTATTT--GTGGCCCGTACGCT-GGTTCATTGATGAGACC-TCTT-TGCACAGGAGAGTCACTAAAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 43839 194 - 837792 TATTAGGCTATTT-CAAGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCGTGGTTTCTCACTTCAG-----TTAAA------TTT--GTGCTTCTGAGTGCTCGTATT------------------------------------------------------CTAGGTG-AAACCGCACTGAGAA---GGTATTT--GTGGCCCATACGCT-GATTCATTGATGAGACT-TCTT-TGTACAGGAGAGCTGCTAAAAAT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773673 194 + 123690457 TATTAGGCTATTT-CAAGAAATT--AAT----GTATTATTGGTAGAAAAACTGAAGCTACAAAATGGCCGGGTTTCTCACTTCAG-----TTAAA------TTT--GTGCTTCTGAGTGCTTGTATT------------------------------------------------------CTAGGTG-AAACCGCACTGAGAA---GGTATTT--GTGGCCCGTTCGCT-GATTCATTGATTAGACT-TCTT-TGCACAGGAGAGCTGCTAAAAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246720 194 + 180051392 TATTAGGCTATTT-CAAGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACCTCAG-----TTAAA------TTT--GTGCTTCTGAGTGTTTGTATT------------------------------------------------------GTAGGTG-AAACTGCACTGAGAA---GGTATTT--GTGGCCCGTACACT-GATTCCTTGATGAGACT-TGTT-TGCACAGGAGAGTTGCTAAAAAT i rheMac8.chr6 C 0 I 7 s macFas5.chr6 179967835 194 - 181584905 TGTTAGGCTATTT-CAAGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACCTCAG-----TTAAA------TTT--GTGCTTCTGAGTGTTTGTATT------------------------------------------------------GTAGGTG-AAACTGCACTGAGAA---GGTATTT--GTGGCCCGTACACT-GATTCCTTGATGAGACT-TGTT-TGCACAGGAGAGTTGCTAAAAAT i macFas5.chr6 C 0 I 7 s macNem1.NW_012013899v1 67476 215 - 100774 TATTAGGCTATTTCCAAGAAATTTAAAT----ATATTAGTGGTAGAAAAA-TGAAGGTACAGAAT-GCCTGGTTTCTCACTTCAGGGTTTTTAAAAAAATTTTTGGGTGCTTCTGG--TTTTGTATT------------------------------------------------------GTAGGTGAAAACTGCACTGAGGAAGCGGTATTTCGTTGGGCCGTACACTGGATTCCTTGATGAGACTATGTTGTGCACAGGAGAGCTGCTAAAAAT i macNem1.NW_012013899v1 I 15 I 24 s chlSab2.chr4 89537454 194 - 91010382 TATTAGGCTATTT-CACGAAATT--AAT----ATATTACTGGTAGAAAAACTGAAGCTACAGAATGGCCGGGTTTCTCACTTCAG-----TTAAA------TTT--GTGCTTCTGAGTGTTTGTATT------------------------------------------------------GTAGGTG-AAACTGCACTGAGAA---GGTATTT--GGGGCCCGTACACT-TATTCCTTGATGAGACT-TGTT-TGCACAGGAGAGCTGCTAAAAAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183437 252 - 204313951 CATTAGGCTATAT-CAAGAAATT--AATTAATATAATACCAGCAGAAAAACTGAAGCTGCAAAATGGCCTGGTTTCTCATTTCAG-----GTAAA------TTT--GTGCTTCTGAGTGCTCGTGTTAAAATCTAGGTGAATATACCTGAATTGAACCTTAGACTGAAGGTAAAAAAAAATCTAGGTG-AAGCCGCACTGAGAA---GGTATTT--GTGGCTTATACACT-GGTTCCTTCACAAGACT-TGTT-TGCACAGGAGAGCTGCTAAAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146234 203 - 16417988 CATCAGGCTATAT-CAAGAAATT--AATTTAATTAATACTGGCAGAAAAACTGAAGTTACAAAATGGCCTGGTTTCTCATTTCAG-----GTAAA------TTT--GTGCTTCTGAGTGCTTGCGTT-------------------------------------------------AAAGTCTAGGTG-AAGCCGCAGTGAGAA---GGTATTT--GTGGCTTGTACAGT-GCTTCCTTCATAGGACT-TGTT-TGCACAGGAGAGCTGCTAAAAAT i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=-10997.000000 s hg38.chr3_KI270779v1_alt 10888 6 + 205312 TATTAC---------------- s panTro5.chr3 199993772 6 + 202621043 TACTGC---------------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 491566 6 - 205426864 TACTGC---------------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44033 6 - 837792 TACTGT---------------- i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773867 6 + 123690457 TACTGT---------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246921 3 + 180051392 CTC------------------- i rheMac8.chr6 I 7 I 2 s macFas5.chr6 179968036 3 - 181584905 CTC------------------- i macFas5.chr6 I 7 I 2 s chlSab2.chr4 89537648 3 - 91010382 TAC------------------- i chlSab2.chr4 C 0 I 6294 s calJac3.chr2 183689 22 - 204313951 TACTGCTCTCAGGGAGGTCTAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146437 22 - 16417988 CACTGCTCTCAGGGAGGTCTGC i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 67691 24 - 100774 I e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=7821.000000 s hg38.chr3_KI270779v1_alt 10894 2 + 205312 GG s panTro5.chr3 199993778 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chr3 491572 2 - 205426864 GG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44039 2 - 837792 GG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773873 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246926 2 + 180051392 GG i rheMac8.chr6 I 2 I 10 s macFas5.chr6 179968041 2 - 181584905 GG i macFas5.chr6 I 2 I 10 s chlSab2.chr4 89543945 2 - 91010382 GG i chlSab2.chr4 I 6294 C 0 s calJac3.chr2 183711 2 - 204313951 GG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146459 2 - 16417988 GG i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 67691 24 - 100774 I e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=169115.000000 s hg38.chr3_KI270779v1_alt 10896 40 + 205312 TGAACAGGTATGAAGAAGA-------CTGTTCTCTGCCCTTC--TTTTT s panTro5.chr3 199993780 40 + 202621043 TGAACAGGTATGAAGAAGA-------CTGTTCTCTGCCCTTC--TTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 491574 40 - 205426864 TGAACAGGTATGAAGAAGA-------CTGTTCTCTGCCCTTC--TTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44041 40 - 837792 TGAACAGGTATGAAGAAGA-------CTGTTATCTGCCCTTC--TTTTT i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773875 43 + 123690457 TGAACAGGTATGAAGAAGAAGG----CTGTTCTCTGCCCTTC--TTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246938 43 + 180051392 TAAACAGGTATGAAGAAGAAAA----CTGTTCTCTGCCCTTC--TTTTT i rheMac8.chr6 I 10 C 0 s macFas5.chr6 179968053 43 - 181584905 TAAACAGGTATGAAGAAGAAAA----CTGTTCTCTGCCCTTC--TTTTT i macFas5.chr6 I 10 C 0 s macNem1.NW_012013899v1 67715 45 - 100774 TAAACAGGTATGAAGAAGAAAA----CTGTTCTCTGCCCCTCGTTTTTT i macNem1.NW_012013899v1 I 24 C 0 s chlSab2.chr4 89543947 42 - 91010382 -TAACAGGTATGAAGAAGAAAA----CTGTTCTCTGCCCTTC--TTTTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183713 44 - 204313951 TTAACAGGTATGAAGAAAGAAGA---CTGTTCTCTGCACTTC--TTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146461 47 - 16417988 TTAACAGGTATGAAGAAAGAAGAAGGCTGTTCTCTGCCCttc--ttttt i saiBol1.JH378155 C 0 I 293 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=445809.000000 s hg38.chr3_KI270779v1_alt 10936 134 + 205312 GCAATAA-AATGTTACAAACT-ATCTTGAGATTGATCCCTTT-TCGGGTGTTTGGG---------TTTTTTTT----AACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGTGGG-TTTCCCTTAATATAACA------ s panTro5.chr3 199993820 134 + 202621043 GCAATAA-AATATTACAAACT-ATCTTGAGATTGATCCCTTT-TCGGGTGTTTGGG---------TTTTTTTT----AACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGTGGG-TTTCCCTTAATATAACA------ i panTro5.chr3 C 0 C 0 s panPan2.chr3 491614 133 - 205426864 GCAATAA-AATGTTACAAACT-ATCTTGAGTTTGATCCCTTT-TCGGGTGTTTGGG----------TTTTTTT----AACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGATGTGGG-TTTCCCTTAATATAACA------ i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44081 135 - 837792 GCAATAA-AATGTTACAAACT-ATCTTGAGTTTGATCCCTTT-TCGGGTGTTTGGG--------GTTTTTTTT----GACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGATGTGGG-TTTCCCTTAATATAACA------ i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120773918 138 + 123690457 GCAGTAA-AATGTTACAAACT-ATCTTGAGTTTGATCCCTTT-TCGGGTGTTTGGG---------TTTTTTTTTTTAAACATTCACATGTTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGTGGG-TTTGCCTTAATATAACA------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 246981 145 + 180051392 GCAATAA-AATGTTACAAACT-ATCTTGAGTTCGATCCCTT--TCGGGTGTTTGGGtttt-tttttttttttttttAAACATTCACATATTTCTTGGAATCATAAAAAATTAACTT-----------TGTGCTTCTGAAGTAGG-TTTGCCTTAATATAACA------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179968096 145 - 181584905 GCAATAA-AATGTTACAAACT-ATCTTGAGTTCGATCCCTT--TCGGGTGTTTGGGtttt-tttttttttttttttAAACATTCACATATTTCTTGGAATCATAAGAAATTAACTT-----------TGTGCTTCTGAAGTAGG-TTTGCCTTAATATAACA------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 67760 144 - 100774 GCAATAATAATGTTACAAACT--TCTTGAGTTCGATCCCCTTATCGGGTGTTCTGG-----GGTTTTTTTTTTTTTAAACATTCACATATTTCTTGGAATCATAAGAAATTAACTT-----------TGTGCTTCTGAAGTAGGTTTTGCCTTAATATAACA------ i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89543989 141 - 91010382 GCAATAA-AATGTTACAAACT-ATCTTGAGTTCGATCCCTTT-TCAGGTGTTTGGG------TTTTTTTTTTTTTTAAACATTCACATATTTCTTGGAATCATAAGAAATTAACTT-----------TGTGCTTCTGAAGTAGG-TTTGCCTTAATATAACA------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183757 161 - 204313951 ACGATAA-CATGTTACAGACTTATCTTGAGTTTGATCCCTTT-TTGGATGTTTGGGTTTTGTGTTTTTTTTTT----AACATTTACATATTTCTTGGAATTATAAGAAATTAACTTTTTTTCAAGTCTGTGCTTCTGAAGAAGG-TTTGCCTTAATATAACTACAACA i calJac3.chr2 C 0 C 0 e saiBol1.JH378155 146508 293 - 16417988 I e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=345567.000000 s hg38.chr3_KI270779v1_alt 11070 108 + 205312 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGTTGTACTTTAAAAAATAATAATTCTTACATTCGTTTGAAGGttttttgtttgtttgtttgtttgt----ttttgagatgaag s panTro5.chr3 199993954 104 + 202621043 CTG---TTGTATTTGTAAGGGGCATTTTT-AAAGTTGTACTTTAAAAAATAATAATTCTTACATTCGTTTGAAGGttt----tttgtttgtttgtttgt----ttttgagatgaag i panTro5.chr3 C 0 C 0 s panPan2.chr3 491747 112 - 205426864 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGCTGTACTTTAAAAAATAATAATTCTTACATTCGTTTGAAGGttttttgtttgtttgtttgtttgtttgattttgagatggag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44216 108 - 837792 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGCTGTACTTTAAAAAATAATAATTCTTACATTCATTTGAAGGttttttgtttgtttgtttgtttgt----ttttgagatggag i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774056 101 + 123690457 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGCTGTACTTTAAAA---AATAATTCTTACATTCGTTTGAAGGttg----tttgtttgtttgtttgt----ttttgagatggag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247126 92 + 180051392 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGCTGTACTTTAAAA---AA----TCTTACATTCTTTTGAAGGttt---------ttttttgtttgt----ttttgagacggag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 179968241 94 - 181584905 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGCTGTACTTTAAAAAATAA----TCTTACATTCTTTTGAAGG-TT---------TTTTTTGTTTGT----TTTTGAGACGGAG i macFas5.chr6 C 0 N 0 s macNem1.NW_012013899v1 67904 98 - 100774 CTGGATGCGTATTTGTAAGGGGCATTTTTCAAAGCTGTACTTTAAAAAATAA----TCTTACAATTCTTTGAAGt-tt---------tttattgtttgt----ttttgagacggga i macNem1.NW_012013899v1 C 0 I 1 s chlSab2.chr4 89544130 99 - 91010382 CTG---ATGTATTTGTAAGGGGCATTTTT-AAAGCTGTACTTTAAAAAATAATAATTCTTACATTCTTTTGAAGGttt---------ttgtttgtttgt----ttttgagacggag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 183918 92 - 204313951 TTG---ATATATTTTTAAGGGGCATTTTT-GAAACTGTACTTTTAAA---AATAATTCTTACATTCTTTTGAAG-------------ttcttttttttt----ttttgagacagag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146801 95 - 16417988 ccG---ATACATTCTTAAGGGGCATTTTT-GAAACTGTACTTTTAAAAATAATAATTCTTACATTCTTTTGAAG-------------ttcttttttttt----ttttgagacagag i saiBol1.JH378155 I 293 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=120196.000000 s hg38.chr3_KI270779v1_alt 11178 48 + 205312 gcttgccctgtcacccaggctggagtgca-gtggcattgatcttggctc s panTro5.chr3 199994058 48 + 202621043 gcttgccctgtcacccaggctggagtgca-gtggcattgatcttggctc i panTro5.chr3 C 0 C 0 s panPan2.chr3 491859 48 - 205426864 gcttgccctgtcacccaggctggagtgca-atggcattgatcttggctc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44324 48 - 837792 actcaccctgtcacccagactggcgtgca-atggcattgatcttggctc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774157 48 + 123690457 gctctctctgtcaccgaggctggagtgca-atggcattgatcttggctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247218 46 + 180051392 gctcgctttgtcgcccaggcagga-tgca-gtggcg-tgatcttggctc i rheMac8.chr6 C 0 M 20 s macNem1.NW_012013899v1 68003 46 - 100774 gctcgc-gtatcggccaggctgga-tgcaggtggcg-cgatcttgtctt i macNem1.NW_012013899v1 I 1 I 1 s chlSab2.chr4 89544229 47 - 91010382 gctcgctttgtcgcccaggctggagtgca-gtggcg-cgatcttggctc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184010 47 - 204313951 tctcactctgttgtccaggctggagtgca-atggtg-tgatctcagctc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146896 47 - 16417988 tctcactctgattcccaggctggagggca-gtggtg-cgatctcagctc i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=245336.000000 s hg38.chr3_KI270779v1_alt 11226 110 + 205312 actgcaacctctg-catctggagttcaagcaattctcct-gcctcagcc-tcctgagtagctgggactacaggcacctgccaccacgcccagctaattttttgtatttttaat s panTro5.chr3 199994106 110 + 202621043 actgcaacctctg-catctggagttcaagcaattctcct-gcctcagcc-tcctgagtagctgggactacaggcacctgccaccacgcccagctaattttttgtatttttaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 491907 110 - 205426864 actggaacctctg-catctggagttcaagcgattctcct-gcttcagcc-tcctgagtagctggcactacaggcacctgccaccacgcccagctaattttttatatttttagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44372 109 - 837792 actgcaacctctg-catctggagttcaagcgattctcct-gcctcagcc-tcctgagtagctgggaccacaggcacctgccaccacgcctggctaa-tttttgtgtttttagt i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774205 110 + 123690457 actgcaacctctg-catctggagttcaagcgattctcct-gcctcagcc-tcctgagtagctgggactacaggcacctgccaccatgcacagcaaattttttgtatttttagt i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 68050 109 - 100774 actgcaaaccccgttgtccggggttcaagcaattctcctagcctcagcctctctgagtagctgggtc-acaggcgcctgccaccatgcccggctaaattttta---ttttagt i macNem1.NW_012013899v1 I 1 I 1 s chlSab2.chr4 89544276 110 - 91010382 actgcaacctcca-cgtccggggttcaagccattctcct-gcctcagcc-ccctgagtagctgggactacaggtgcccgccaccacgcccagctaattttttgtatttttagt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184057 100 - 204313951 actgcaacctctg-tctccctggttcacgtgattctcct-----------gcctgagttgttgggattataggcgtccgccactatgcccgcccaa-tttttgtatttttagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 146943 99 - 16417988 actgcaacctctg-cctccctggttca-gtgattctcct-----------gcctgagtagttgggactgtaggcgcccgccaccacgcccgcccta-tttttgtatttttagt i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I e rheMac8.chr6 247264 20 + 180051392 M a score=163911.000000 s hg38.chr3_KI270779v1_alt 11336 51 + 205312 agagatggg--gtttcaccgtgttagc-caggatggtctcaatctcctgacctc s panTro5.chr3 199994216 51 + 202621043 agagatggg--gtttcaccgtgttagc-caggatggcctcaatctcctgacctc i panTro5.chr3 C 0 C 0 s panPan2.chr3 492017 51 - 205426864 agagacggg--gtttcaccgtgttagc-caggatggtctcaatctcctgacctc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44481 51 - 837792 agagatggg--gtttcgccatgttagc-taggatggtctcaatctcctgacctc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774315 51 + 123690457 ggagacggg--gtttcactgtgttagc-caggatggtctcgatctcctgacctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247284 51 + 180051392 agagatggg--gtttcactgtgttagc-taggatggtctcaatctcctgacctc i rheMac8.chr6 M 20 C 0 s macNem1.NW_012013899v1 68160 53 - 100774 agagatggggtgtttcactgtgtaggcgtagggatgt-tcaatctcctgacctc i macNem1.NW_012013899v1 I 1 I 14 s chlSab2.chr4 89544386 51 - 91010382 agagatggg--gtttcaccgtgttagc-caggatggtctcaatctcctgacctt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184157 51 - 204313951 agagctggg--atttcaccatgttgat-caggcttgtcttgaactcctgacctc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 147042 51 - 16417988 agagatggg--gtttcaccatgttggt-caggctggtcttgaactcctgacctc i saiBol1.JH378155 C 0 C 0 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=23986.000000 s hg38.chr3_KI270779v1_alt 11387 11 + 205312 atgatccaccc s panTro5.chr3 199994267 11 + 202621043 atgatccgccc i panTro5.chr3 C 0 C 0 s panPan2.chr3 492068 11 - 205426864 gtgatccaccc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44532 11 - 837792 gtgatctgccc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774366 11 + 123690457 atgatctgccc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247335 11 + 180051392 attgtctgcct i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89544437 11 - 91010382 gtgatctgcgc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184208 11 - 204313951 gtgatccatcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 147093 11 - 16417988 atgatccaccc i saiBol1.JH378155 C 0 C 0 e macNem1.NW_012013899v1 68213 14 - 100774 I e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=139078.000000 s hg38.chr3_KI270779v1_alt 11398 40 + 205312 acctcggcctcccaaagtgctggga--ttacaggcgtgagcc s panTro5.chr3 199994278 40 + 202621043 acctcggcctcccaaagtgctggga--ttacaggcgtgagcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 492079 40 - 205426864 acctcggcctccccacgtgctggga--ttacaggcgtgagcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44543 40 - 837792 accccggcctcccaaagtgctggga--ttacaggcgtgagcc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774377 40 + 123690457 gtgtcagcctcccaaagtgctggga--ttacaggtgtgagcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247346 40 + 180051392 gcctcggtctcccaaagtgctggga--ttacaggcgtgagcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 68227 42 - 100774 gcctcggtctcccaagatgcttgggatttacaggcgtgagcc i macNem1.NW_012013899v1 I 14 C 0 s chlSab2.chr4 89544448 40 - 91010382 acttcagcctcccaaagtgatagga--ttacaggcgtgagcc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184219 40 - 204313951 gcctcggcgtcccaaagtgctggga--ttacaggtgtgagcc i calJac3.chr2 C 0 T 47777 s saiBol1.JH378155 147104 40 - 16417988 acctcggcatcccaaagtgctggga--ttacaggtgtgagcc i saiBol1.JH378155 C 0 T 48915 e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=6607.000000 s hg38.chr3_KI270779v1_alt 11438 3 + 205312 -GGG s panTro5.chr3 199994318 4 + 202621043 aGGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 492119 4 - 205426864 aGGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44583 4 - 837792 aGGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774417 4 + 123690457 aAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247386 4 + 180051392 aGGt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 68269 4 - 100774 aGGt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89544488 4 - 91010382 aGGG i chlSab2.chr4 C 0 C 0 e calJac3.chr2 184259 47777 - 204313951 T e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=20613.000000 s hg38.chr3_KI270779v1_alt 11441 7 + 205312 ggccaac s panTro5.chr3 199994322 7 + 202621043 ggccaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 492123 7 - 205426864 ggccaac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44587 7 - 837792 ggccaac i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774421 7 + 123690457 ggccaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247390 7 + 180051392 ggccaat i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 68273 7 - 100774 ggtcaat i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89544492 7 - 91010382 ggccaac i chlSab2.chr4 C 0 C 0 s calJac3.chr5 41951593 7 + 159171411 gaccaac i calJac3.chr5 n 47777 C 0 e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e manLeu1.NW_012109696v1 6140463 1053 + 6207128 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=251509.000000 s hg38.chr3_KI270779v1_alt 11448 71 + 205312 atggtgaaactctatctctactaaaaatac-aaaattagccgggaatggtggtgtgcgcctgtaatcccagc s panTro5.chr3 199994329 71 + 202621043 atggtgaaactctatctctactaaaaatac-aaaattagctgggaatggtggtgtgcgcctgtaatcccagc i panTro5.chr3 C 0 C 0 s panPan2.chr3 492130 71 - 205426864 atggtgaaaccctatctctactaaaaatac-aaaattagctgggaatggtgatgtgcgcctgtaatcccagc i panPan2.chr3 C 0 M 10571 s gorGor5.CYUI01015777v1 44594 71 - 837792 atggtgaaaccctatctctactaaaaatac-aaaattagccaggaatggtggtgtgcgcctgtaatcccagc i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774428 71 + 123690457 agggtgaaactctatctctactaaaaatac-aaaattagccaggaatggtggtgtgcgcctgtaatcccagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247397 70 + 180051392 atggtgaaacctcatctctactaaaaatac-aaaattagctgggaatggtggtgtgcgcctgtaat-ccagc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 68280 71 - 100774 atggtgaaacctcatctctactaaaaatac-aaaattagtcgggaatggtggtgtgcgcctgtaatcccagc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89544499 70 - 91010382 atggtgaaaccccatctctactaaaaatac-aaaattagctgggaatggtggtgtgcacctgtaat-ccagc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6141516 70 + 6207128 atggtgaaaccccatctctactaaaaatac-aaaattagctgggaatggtggtgtgcgcctgtaat-ccagc i manLeu1.NW_012109696v1 M 1053 C 0 s calJac3.chr5 41951600 71 + 159171411 atggtgaaaccccgtctctaatgaaaatacaaaaatgagctgggcatggtgacaagcgcctataac-ctagc i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=595599.000000 s hg38.chr3_KI270779v1_alt 11519 226 + 205312 tactcgggaggctgaggcatgagaatcacttgaacctgggaggcagaggttgcagtgagctgagatagcgccactacagtccagcctgggggacag--tgagactccatctcaaaa--aaaaaa---aacaaaaaaagaatagaaTAACTCTTGtttaggtgttacaaaatccaggccagaccaatctaaactttaatctcatacccagttcctagatgagtcccttctccag s panTro5.chr3 199994400 224 + 202621043 tactcgggaggctgaggcatgagaatcacttgaacctgggaggcagaggttgcagtgagctgagatagcgccactgcactccagcctgggggacag--tgagactccatctc--aa--aaaaaa---aacacaaaaagaatagaataaCTCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAACTTTAATCTCACACCCAGTTCCTAGATTAGTCCCTTCTGCAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44665 222 - 837792 tactc-ggaggctgaggcatgagattcacttgaacct-ggaggcagaggttgcagtgagctgagatagcgccactgcactccagcctgggggacag--tgagactccatctc--aa--aaaaaa---aaccaaaaaagaatagaataaCTCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAACTTTAATCTCACACCCAGTTCCTAGATTAGTCCCTTCTCCAG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774499 213 + 123690457 tactcgggaggctgaggcatgagaatcacttgatcccgggaggcagaggttgcagtgagctgagatagcgccactgcactcctgcctgggggacag--tgaggttccatctc--aa--aaaaaa--------------TATAGAATAACTTTTGtttaggtgttacaaaatccaggccagacaaatctaaactttaatctcacacccagttcctagattagtcccttctccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247467 223 + 180051392 cactcgggaggctgaggcatgagaatcagttgaacccgggaggcagaggttgcagtgagctgagattgcaccactgcactccagccttggggacag--tgagactccatctc--aa--aaaaaa---aaaaaaaaaaaaaaggaataaCCCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAAC-TTAATCTCACACCCAGTTCCTAGACTAGTCTTTTCTCCAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 68351 220 - 100774 tacccggcaggctgaggcatgagaatcacttgaatccgggaggcagaggttgcagtgagctgagattgcaccactgcactccaacctgagggacaA--TTAAACaaaa---a--aa--aaaaaa---aaaaaaaaaaaaaaGGAATAACCCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAAC-TTAATCTCACACCCAGTTCCTAGATTAGTCTCTTCTCCAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89544569 225 - 91010382 cactcgggaggctgaggcatgagaatcagttggacccgggaggcagaggttgcagtgagctgagatcacgccactgcactccagccttggggacag--tgagactccatctc--aaacaaaaaa---aaagaaaTGATAATGGAATAACCCTTGtttaggtgttacaaaatccaggccagacaaatctaaac-ttaatctcacacccagttcctagattagtcctttctccag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6141586 222 + 6207128 cactcgggaggctgaggcatgagaatcagttggacccgggaggcagaggttgcagtgagctgagatcacgccactgcactccagccttggggacag--tgagactccatctc--a---aaaaaa---agaaaaaTGATAATGGAATAACCCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAAC-TTAATCTCACACCCAGTTCCTAGATTAGTCTCTTCTCCAG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41951671 229 + 159171411 tactcaggaggctgaggcaggagaattacctgaacctgaaaggtggaggttgcagtgagctgagattgtgccattgtactccagcctgggccacagaccaagactctgtctc--aa--aaaaaacaaaaacaaaaataaaTGGAATAACTGATGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAACTTTAATCTCACACCCAGTTCCTAGATGAGTCTCTTCTCCAG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e cerAty1.NW_012009470v1 16187676 5654 + 16742782 I a score=151631.000000 s hg38.chr3_KI270779v1_alt 11745 41 + 205312 ctcaggttcggcctaagcctcagggttccttg-cttggtggg s panTro5.chr3 199994624 41 + 202621043 CTCAGGTTCGGCCTAAGCCTCAGGGCTCCTTA-CTTGGTGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44887 41 - 837792 CTCGGGTTCAGCCTAAGCCTCAGGGTTCCTTA-CTTGGTGGG i gorGor5.CYUI01015777v1 C 0 C 0 s nomLeu3.chr11 120774712 41 + 123690457 ctcaggttcggcctaagcctcagggttcctca-cttggtggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247690 41 + 180051392 CTCAGGTTTGGCCTAAGCCTCAGGGGTCCTTA-CTTGGTGGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 68571 41 - 100774 CTCAGGTTTGGCCTAAGCCTCAGGGGTCCTTA-CTTGGTGGG i macNem1.NW_012013899v1 C 0 I 1360 s cerAty1.NW_012009470v1 16193330 41 + 16742782 CTCAGGTTTGGCCTAAGCCTCAGGGGTCCTTA-CTTGGTGGG i cerAty1.NW_012009470v1 I 5654 C 0 s chlSab2.chr4 89544794 41 - 91010382 ctcaggtttggcctaagcctcaggggtcctta-cttggtggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6141808 41 + 6207128 CTCAGGTTTGGCCTAAGCCTCAGGGGTCCTTA-CTTGGTGGG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41951900 42 + 159171411 CTCCAGTTCAGCCTAAGCCTTGGGGGTCCTTAGCTGGGCGGG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=945493.000000 s hg38.chr3_KI270779v1_alt 11786 331 + 205312 caccacctgctcccttccccgcctttgttcctc-------tttttcctctgctggctcctccggggttgggtgtgTTCAGAGGCAGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAGATA-TAGCTTTCTCTTGTAGGATATTTCatttatttatctattaaaaatatttatttagaacacaccattcatgtgccagaccctgttccaggaac-tggggagagggtgataaatgagatcaacaaaaatacctgcccacattaagctcctgttctagggaagacaaaaaagaaagaaaatacacgtgtccttagtacatt s panTro5.chr3 199994665 332 + 202621043 CACCACCTGCTCCCTTCCCCACCTTTGTTCCTC-------TTTTTCCTCTGCTGGCCCCTCCGGGGTTGGGTGTGTTCAGAGGCAGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAGATACTAGCTTTCTCTTGTAGGATATTTCatttatttatctattaaaaatatttatttagaacacaccattcatgtgccagaccctgttccaggcag-tggggagagggtgataaatgagatcaacaaaaatacctgcccacattaagctcctgttctagggaagacaaaaaagaaagaaaatacacgtgtccttagtacatt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015777v1 44928 324 - 837792 CACCACCTGCTCCCTTCCCCACCTTTGTTGCTC-------TTTTTCCTCTGCTGGCTCTTCCGGGGTTGGGTGTGTTCAGAGGCAGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAGATACTAGCTTTCTCTTGTAGGATATttcatttatt----tattaaaaatatttatttagaacactccattcatgtgccagaccctgttccaggcac-tggggagagggtgataaatgagatcaacaaaaatacctgcccacattaagctcctgttctagggaagac----aagaaagaaaatacacgtgtccttagtacatt i gorGor5.CYUI01015777v1 C 0 N 0 s nomLeu3.chr11 120774753 323 + 123690457 caccacctgctcccttccccacctttgttcctc-------tttttcctctgctggctcctccggggttgggtgtgttcagtggcggaaacaggctaaaggtctttggcttttaggttctgttgATGGGTGAGTTCCAGATACTAGCTTTCTCTTGTAGGGTATttcatttatt----cctcaaaaata-----ttagaacacaccattcatgtgccagaccctgttccaggcac-tggggctagggtgataaatgagatcaacaaaaatacctgcccacattaatctcctgttctagggaagaccaaaaagaaagaaaatacacgtgtccttagtacatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 247731 332 + 180051392 CGCCACCTGCTCCCTTCCCCACCTTTGTTCCTG-------TTTTTCCTCTGCTGGCTCCTCCCGGGCTGGGTGTGTTCAGAGGCGGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTATTGATGGGTGAGTTCCAAATACCAGCTTTCTCTTGTAGGATATTTCatttagttatctattaaaaatacttatttggaacacaccattcatgtgccagacactgttccaggcac-tggggatagggtaataaatgagatcaacagaaatacctgcccacgttaagctcctgttctagggaagacgaaaaagagagaaaatacacgtgtccttagtacatt i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16193371 319 + 16742782 CGCCACCTGCTCCCTTCCCCACCTTTGTTCCTG-------TTTTTCCTCTGCTGGCTCCTCTGGGGTTGGATGTGTTCAGAGGCGG----------AAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAAATACTAGCTTTCTCTTGTAGGATATTTCatttagttatctattaaaaatatttatttagaacacaccattcatgtgccagacactgttccaggcgcttagggatagggtgatagatgagatcaacaaaaatacctgcccacgttaagctcctgttctagggaagacaaaaa----ataaaatacacgtgtccttagtacgtt i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89544835 329 - 91010382 cgccacctgctcccttccccacctttgttcctg-------tttttcttctgctggctcctcccgggttgggtgtgttcagaggcggagacaggctaaaggtctttggcttttaggttctgttgATGGGTGAGTTCCAAATACTAGCTTTCTCTTGTAGGATATTTCATTTAGttatctatttaaaatatttatttagaacacaccattcatgtgccagacactgttccaggtgcttagggatagggtgatagatgagatcaacaaaaatacctgcccacgttaagctcctgttctagggaagacaaaaa----ataaaatacacgtgtccttagtacatt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6141849 329 + 6207128 CGCCACCTGCTCCCTTCCCCACCTTTGTTCCTG-------TTTTTCCTCTGCTGGCTCCTCTGGGGTTGGATGTGTTCAGAGGCGGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAAATACTAGCTTTTTCTTGTAGGATATTTCatttagttatctattaaaaatatttatttagaacacaccattcatgtgccagacactgttccaggcgcttagggatagggtgatagatgagatcaacaaaaatacctgcccacattaagctcctgttctagggaagacagaaa----ataaaatacacgtgtccttagtacgtt i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41951942 337 + 159171411 CACCACCTGTTCCCTTCCCCACCTTTGTTCCTGTTTTTTTTTTTTCCTCTGCTGGCTCCTCTGGGGTTGGCTGCGTTCAGAGGTAGGGACAGGCTAAAGGTCTCTGGCTTTTTGGTTCTGTTGATGGGTGAGCTCCCAATACTAGCTTTCTCTTGTAGGATATTTCatttatttatttgttaaaaatatttacttagaacacatcattcacatgccagccactgttctaggcac-tggggatagggtgataaatgagataaacaaaaatacctgctcatgtaaagctcctattctagggaagacaaaaaag--agaaaatacatgtgtacttagtacatt i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 68612 1360 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=783197.000000 s hg38.chr3_KI270779v1_alt 12117 357 + 205312 agaaggttccaagtactgtagagaaaaataaagtaggttggactcggtggctcatgcctgtaatcccagcactttgcgaggctgaggtgggaggattacttgagctcaggaatttgagaccagcctgggc--aacatggc-aaatcctgtctctacc-------------------------aaaataaa-aaaaaaaaaattagctggatatggtggcgtgcacctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccaggaggtgaaggttgcagtaagctgagatcgtg-ccattgcac-tccagcctgagtgacag--agccaaaccctgtctc-aaaaacaaggaaag-----------------aaagaaaatgaaaaaaagaaag s panTro5.chr3 199994997 352 + 202621043 agaaggttccaagtactgtagagaaaaataaagtaggttggactcggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggaggattacttgagctcaggaatttgagaccagcctgggc--aacatggc-aaatcctgtctctaca------------------------------aaa-aaaaaaaaaattagctgggtatggtggcatgcacctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccaggaggtgaaggttgcagtaagctgagatcgtg-ccattgcac-tccagcctgagtgacag--agccagaccctgtctc-aaaaataaggaaag-----------------aaagaaaatgaaaaaaagaaag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 835780 356 - 880730 agaaGGTTCCAAGTACTGTaaagaaaaataaagcaggctggactcagtggctcacgcctgtaattccaacac-ttgagaggctgaggtggga-gattgctcgagctcaggagttcgagaccagcctgggc--aacatagcaaaaccctgtctct--------------------------------------aaaaaaaaattagctgggtgtggtgacgtgcacctgtagtcccagccact-gggaggctgaggaggggggattgattgagcccaggaggtgaaggttgcagtaagccaagatcacg-ccattgcac-tccagcctggatgacag--agcccgaccctg-----aaaaagaaagaaagaaggaaggaaggaaggaaaagaaaaagaaagaaagaaag i gorGor5.CYUI01015759v1 N 0 I 61 s nomLeu3.chr11 120775076 365 + 123690457 agaagtttgcaagtagtgtagagaaaaataaagtaggttggactcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggaggattacttgagctcaggaatttg-------------------------------tgtctctacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-aaaaaaaaaattagctgggtatggtggcatgcacctgtagtcccagccactggggaggctgaggagggagaattgcttcagccctggaggtgaaggttgcagtaagccgagatcgtg-ccattgcac-tccagcctgggtgacag--agccagaccctgtctc-aaaaaaaaaaaaaaaaaccaaaagg------aaagaaagatgaaaaaacaaag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248063 347 + 180051392 agaaggttccaagtactgtaaagaaaaataaagcaggctggactcggcggctcatgcctgtaatcccggcactttgggagac--aggtgggaggattacttgagctcaggaatttgagaccagcctgggc--aacatggc-aaatcctgtctctaccaa----------------------------aag-aaaaaaaaaattagctgggtgtggtggcaggcatctag--tcccagccactggggaggctgaggagggagaattgcttcagccttggaggtgaaggttgcagtaagccaagatcgtg-ccattgcac-tccagcctgggtgacaa--agccagaccctgtctc---aaaaaaaaagt------------------aaagaaaatgaaaaaaagaaag i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16193690 351 + 16742782 agaaggttccaagtactgtaaagaaaaataaagcaggctggactcggcggctcatgcctgtaatcccggcactttgggagac--aggtggaagagatttctgagctcaggaatttgagaccagcctgggt--aacatggc-aaatcctgtctctaccagat--------------------------aag-aaaaaaaaaatta-ctgggtgtg--tgtgggcatctgatttcccagccact-gcgaggctgaggagggagaattgcttcagcccggga-gtgaa-gttgcataagtccgagtccgtgcccattgcacttccagcctggttgatag--agccagaacctgtctacagaaaaaaaaagta-----------------aaagaaaatgaaaaaaagaaag i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89545164 350 - 91010382 agaaggttccaagtactgtaaagaaaaataaagcaggctggactcagtggctcatgcctgtaatcccggcactttgggagac--aggtgggaggattacttgagctcaggaatttgagaccagcctgggt--aacatggc-aaatcctgtctctaccaa----------------------------aagaaaaaaaaaaattagctgggtgtggtggc-ggcatctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccgggaggtgaaggttgcagtaagccgagatcgtg-ccattgcac-tccagcctgggtgatag--agccagaccctgtctc-agaaaaaaaaag-------------------aaagaaaatgaaaaaaagaaag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6142178 350 + 6207128 agaaggttccaagtactgtaaagaaaaataaagcaggctggactcggcggctcatgcctgtaatcccggcactttgggagac--aggtgggaggattacttgagctcaggcatttgagaccagcctgggt--aacatggc-aaatcctgtctctaccaa----------------------------aag--aaaaaaaaattagctgggtgtggtggtgggcatctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccgggaggtgaaggttgcagtaagccgagatcgtg-ccattgcac-tccagcctgggtgatag--agccagaccctgtctc-agaaaaaaaaagt------------------aaagaaaatgaaaaaaagaaag i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41952279 304 + 159171411 agaaggttccaagtactgtaaagaaaaataaagcaggccagactcagtgactcacatctgtaatcccagcactttgagag--------------------------------ttcgagaccagcctggtttggtcacgacaaaaccaggtctctac------------------------------------aaaaaaaaattagttgggtgtgggggcatgcacctgtggtcccagccactggggaggcttaggtgggaggattgcttgagcctgggaggcggagatggcagtaagccaagattgta-ccattgcac-tccagcctgggtgacagccagacagaccctgtctg-gaaaaaaaaaaa-------------------aaaaaaag-------------- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 68612 1360 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=74422.000000 s hg38.chr3_KI270779v1_alt 12474 59 + 205312 cagagatgggg-caagcaggggagagggCT---------------GGTGCTGGGGTCACAGCGGAGGGGCTGGGG s panTro5.chr3 199995349 59 + 202621043 cagagatgggg-caagcaggggagagggCT---------------GGTACTGGGGTCACAGCGGAGGGGCTGGGG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120775441 58 + 123690457 cagagatgggg--aagCAGAGGAGAGGGCT---------------GGTGCTGGGGTCACAGGGGAGGGGCTGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248410 74 + 180051392 cagagatgggg-caagcaggggagagggCTGGGGACACAGGGGAGGGAGCTGGGGATGCAGGGGAGGGGTTGAGA i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16194041 68 + 16742782 ca-agatgggg-caagctgggaag-gggCT-GGGACATCGGGGGAGGTGCT-GGGATGCA-GGGAGGGGTTG-GG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89545514 74 - 91010382 cagagatgggg-caagcaggggagagggCTGGGGACACAGGGGAGGGTGCTGGGGACACAGGGGAGGGGTTGAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6142528 74 + 6207128 caaagatgggg-caagcaggggagagggCTGGGGACACAGGGGAGGGTGCTGGGGATGCAGGGGAGGGGTTGGGA i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41952583 28 + 159171411 cagagatgggggtaagtggggaagtggg----------------------------------------------- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 68612 1360 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e gorGor5.CYUI01015759v1 836136 61 - 880730 I a score=31260.000000 s hg38.chr3_KI270779v1_alt 12533 25 + 205312 ATGCACGGGAGGGGCTGGGGATGTG s panTro5.chr3 199995408 25 + 202621043 ATGCACGGGAGGGGCTGGGGATGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 836197 24 - 880730 ATGC-TGGGGGGGGCTGGGGATGTG i gorGor5.CYUI01015759v1 I 61 C 0 s nomLeu3.chr11 120775499 5 + 123690457 --------------------ATGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248484 25 + 180051392 ACACGGGGGAGAGGCTGGGGACGCA i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16194109 24 + 16742782 ACACGGGGGAGAGGCT-GGGACGCA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89545588 25 - 91010382 ACACGGGGGAGAGGCTGGGGACGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6142602 25 + 6207128 ACACGGGGGAGAGGCTGGGGACGCA i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41952611 12 + 159171411 -------------gctggggatgCA i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 68612 1360 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=949135.000000 s hg38.chr3_KI270779v1_alt 12558 311 + 205312 AGCT---TTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTC-ATGGCACAAGGGCCTCCTGGGGCTTGC-GGTGG-----TTTTGCGCCAA-GCTAATATC-TTGTTCTTCCCAACAGACGG-AGGCCCATTGAGGCTTC-TGTGTCCTCCACGGGGACCAG-CATTGGGCTAAACCTGCAGAC-ACCATTGCAAAGGGAATTCAG--------GCAAACCCGCTGGTGAAAAATGATTCCAGCGTGGGG---ACAGAGGCT-GACATTTCTC-G-CGTGGGTGAT--TTAATGTTGGGCCTCAATTTTTCACTCCCCCCGTAAGAG-TATGACATAGC s panTro5.chr3 199995433 311 + 202621043 AGCT---TTCTTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTC-ATGGCACAAGGGCCCCCTGGGGCTTGC-GGTGG-----TTTTGCGCCAA-GCTAATATC-TTGTTCTTCCCAACAGACGG-AGGCCCATTGAGGCTTC-TCTGTCCTCCACGGGGACCAG-CATTGGGCTAAACCTGCAGAC-ACCATTGCAAAGGGAATTCAG--------GCAAACCCGCTGGTGAAGAATGATTCCAGCGCGAGG---ACAGAGGCT-GACATTTCTT-G-CGTGGGTGAT--TTAATGTTGGGCCTCAATTTTTCACTCCCCCCATAAGAG-TATGACATAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 836221 313 - 880730 AGCT---TTCCTGAGCTCCCACAG---TTCTCTGCCCCTCTCCTGTTTC-ATGGCGCGAGGGCCCCCTGGGGCTTGC-GGTGG-----TTTTGCACCAA-GCTAGTATC--TGTTCTTCCCAACAGACGG-AGGCCCATTGAGGCTTC-TCTGTCCTCCATGGGGAACAG-CATTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAAGTCAGCTC--A--GGCAACCCACTGATGAAGAATGATTCCAGCTTG-GG---ACAGAGGTT-GACATTTCTT-G-CGTGGGTGAT--TTAATGTTGGGCCTCAATTTTTCACTCCCCCCGTAAGAG-TATGACATAGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120775504 312 + 123690457 AGCT---TTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTC-ACAGGGCAAGGGCCACCTGGGGCTTGC-GGTGG-----TTTTACACCAA-GCTAATATC-TTGTTCTTCCCAACAGACGG-AGGCCCATTGAGGCTTC-TCTGTCCTCCATGAGGAATAG-CATTGGCCTAAACCTGCAGAC-AGCATTGCAAAGAGAAGTCAG--------GCAAACCCGCTGATGAAGAATGATTCCAGTGTGCTG---ACGGAGGCT-GACATTTCTT-GCCATGGGTGAT--TTAATGTTGGGCCTCAATTTTTCACTCCCCCCGTAAGAG-TATGACATAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248509 318 + 180051392 AGCT---TGCCTGAGTTCCCACAG---TTCTCTTCCCCTCTCCTGTCAC-ACAAGGCGTGGGCCCCCTGGGGCTTGT-GGTGG-----TTTTGCGCCAA-GCTAATATC-TTGTTCTTCCCAACAGACAG-AGGCCCACTGAGGCTTC-TCTCTCCTCCACAGGGAACAG-CATTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAAGTCAGCTC--AG-GCGAACCCGCTGGTGAAGAATGATTCCAGCGTGGGG-ACACAGAGGCC-GACATTTCTT-GCCATGGGTGAT--TTAATGTTGGGCCTCAATTTTTCACT-CTCCTGTAAGAG-TATGACACAGC i rheMac8.chr6 C 0 I 7 s macNem1.NW_012013899v1 69972 321 - 100774 AGCT---TTCCTGAGTT-CCACAG---TTCTCTGCCCCTCTCCTGTCAC-AGCAAGCGTGGG-CCCCTGGGGCTTGTCGGTGG-----TTTTGCGCCAAGGCTAATATC-TTGTTTTTCCCAACAGACAGCAGGCCCACTGAGGCTTC-TCTCTCCTCCACAGGGAACAGCCATTGGCCTAAACCTGCAGAC-ACCATTGCAAGAGGAAGTCAGCTC--AGTGCGAA-CCGCTGGTGAAGAATGATTCAAGCGTGGGC-GACCAGAGGCCGGACATTTCTTGGCCATGGGTGAT--TAATTTTTGGGCCTCCAATTTTCACT-CTCCTGT-AGAG-TATGACACAGC i macNem1.NW_012013899v1 I 1360 I 7 s cerAty1.NW_012009470v1 16194133 331 + 16742782 AGCTTCCTTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCACAACAAGGCAGTGGCCCCCTGGGGCTTGT-GATGGGGGGTTTTTTGGCCAAGCCTAATATCTTTGTTCTTCCCAACAGACAG-AGG-CCACTGAGGCTTCTTCTCTCCTCCACA-GGAACAG-CATTGGCCTAAACCTGCAGAC-ACCATTGCACAAGGAAGTCAGCTTCAAG-GCGAACCCGCTGGTGAAGAATGA-TCCAGCGTGGGGAACACAGAGGCC-GACATTTCTT-GCTGTGGGTGATTATAATGGTTGG--CTCAATTTTTCACT-CCCCTGTAAGAGTTATGACACAGC i cerAty1.NW_012009470v1 C 0 I 14 s chlSab2.chr4 89545613 316 - 91010382 AGCT---TGCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCAC-ACAAGGCGT--GCCCCCTGGGGCTTGT-GGTGG-----TTTTGCGCCAA-GCTAATATC-TTGTTCTTCCCAACAGACAG-AGGCCCACTGAGGCTTC-TCTCTCCTCCACAGGGAACAG-CATTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAAGTCAGCTC--AG-GCGAACCCGCTGGTGAAGAATGATTCCAATGTGGGG-ACACAGAGGCC-GACATTTCTT-GCCATGGGTGAT--TTAATGTTGGCCCTCAATTTTTCACT-CTCCTGTAAGAG-TATGACACAGC i chlSab2.chr4 C 0 I 7 s manLeu1.NW_012109696v1 6142627 318 + 6207128 AGCT---TTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCAC-ACAAGGCGTGGGCCCCCTGGGGCTTGT-GGTGG-----TTTTGTGCCAA-GCTGATATC-TTGTTTTTCCCAACAGACAG-AGGCCCACTGAGGCTTC-TCTCTCCTCCATGGGTAACAG-GATTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAAGTCAGCTC--AG-GCGAACCCGCTGGTGAAGAATGATTCCAATGTGGGG-ACACAGAGGCC-GACATTTCTT-GCCATAGGTGAT--TTAATGTTGGCCCTCAATTTTTCACT-CTCCTGTAAGAG-TATGACACAGC i manLeu1.NW_012109696v1 C 0 I 7 s calJac3.chr5 41952623 323 + 159171411 AGCG---TCCCTGAGCTCCCATGGTTCTTCTCTGCCCCTCTCCTGTCTC-ATGGGGCACAGGTCCCCTGGGGCTTGT-GGTTG-----TTTTACGCCAA-TCTAATATC-CTTTTCTTCCCAACAGTTGG-AGGCCAACTGAGGCTTC-TTTGTCCTCCACGGGGAACAG-CACTGGCCTAATCCTGCGGACAACCATTGCAAAGGGCAGTCAGCTC--CA-GTAAACCTGCTGATGAAGAATGATCCCAGAGTGGGG-ACACAGAGGCT-GACATTTCTT-GCTGTAGGTGAT--TTAATGATGGGCCTCAATATTTCACTCCTCTTGTAAGAG-TATGACACATC i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=8394.000000 s hg38.chr3_KI270779v1_alt 12869 5 + 205312 CACAA s panTro5.chr3 199995744 5 + 202621043 CACAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 836534 5 - 880730 CACAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120775816 5 + 123690457 CACAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248834 5 + 180051392 TGCAG i rheMac8.chr6 I 7 C 0 s macNem1.NW_012013899v1 70300 5 - 100774 TGCAG i macNem1.NW_012013899v1 I 7 C 0 s chlSab2.chr4 89545936 5 - 91010382 TGCAG i chlSab2.chr4 I 7 C 0 s manLeu1.NW_012109696v1 6142952 5 + 6207128 TGCAG i manLeu1.NW_012109696v1 I 7 C 0 s calJac3.chr5 41952946 5 + 159171411 CACAT i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e cerAty1.NW_012009470v1 16194464 14 + 16742782 I a score=178543.000000 s hg38.chr3_KI270779v1_alt 12874 48 + 205312 CCTTGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCG--TCCCATAGG s panTro5.chr3 199995749 48 + 202621043 CCTTGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCA--TCCCATAGG i panTro5.chr3 C 0 I 9323 s gorGor5.CYUI01015759v1 836539 48 - 880730 CCTTGCCAGGACCCGAGGGAGGGTGGATGGACTTATCCA--TCCCATAGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120775821 48 + 123690457 CCTTGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCA--TCCCATAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248839 48 + 180051392 CCTAGCCAGGGCCCGAGGGAGGGTGGACAGACTTCTCCA--TCCCACAGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 70305 48 - 100774 CCTAGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCA--TCCCACAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16194478 50 + 16742782 CCTAGCCAGGGCCCGAGGGAGGGTGGACGGACTTATCCCATCCCCACAGG i cerAty1.NW_012009470v1 I 14 C 0 s chlSab2.chr4 89545941 48 - 91010382 CCTAGCCAGGGCCCGAGGGAGGGTGAACGGACTTATCCA--TCCCACAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6142957 48 + 6207128 CCTAGCCAGGGCCCGAGGGAGGGTGGACGGACTTATCCA--TCCCACAGG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41952951 48 + 159171411 CCTTGCCAGGGCCTGAGGGAGGCTGGAGAGACTTATCCA--TCCCATAGG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=695771.000000 s hg38.chr3_KI270779v1_alt 12922 214 + 205312 TGTTGCTCGtggctgggtgactt-gcttctgccaac-gagattttc-acaga-cacggcacaagcagaagcctggaatgtgtgggcactgccaggcctg---------------------------------------------ccgtctAAGGCTCTTGATTTTCCCCATGAGATGCA-CGTGCCCCAGGGAACG---GCGGCTCTGGCTGTGGGATGAGAGGCGTGTGGAGCAGTCATGGTTCCCATCCTTAGCCTGGAGTCAAG s panTro5.chr3 200005120 214 + 202621043 TGTTGCTCGtggctgggtgactt-gcttctgccaac-gagattttc-acaga-cacggcacaagcagaagcctggaatgtgtgggcactgccaggcctg---------------------------------------------ccctctAAGGCTCTTGATTTTCCCCATGAGATGCA-CGTGCCCCAGGGAACG---GCGGCTCTGGCTGTGGGATGAGAGGCGTGTGGAGCAGGCATGGTTCCCATCCTTAGCCTGGAGTCAAG i panTro5.chr3 I 9323 C 0 s gorGor5.CYUI01015759v1 836587 214 - 880730 TGTTGCTCGTGGCTGGGTGACTT-GCTTCTGCCAAC-GAGATTTTC-ACAGA-CACGGCACAAGCAGAAGCCTGGAATGTGTGGGCACTGCCAGGCCTG---------------------------------------------CCCTCTAAGGCTCTTGATTTTTCCCATGAGATGTG-CGTGCCCCAGGGAACG---GCAGCTCTGGCTGTGGGATGAGAGGTGTGTGGAGCAGGCATGGTTCCCATCTTCAGCCTGGAGTCAAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120775869 214 + 123690457 TGTTGCTCGtggctgggtgactt-gcttctgccagt-gagattttc-acaga-cacggcacaagcagaagcctggaatgtgtgggcactgccaggcctg---------------------------------------------ccctctGAGGCTCTTGATTTTCCCCACGAGATGCG-CGTGCCCCAGGGAACG---GCGGCTCTGGCTGCGGGATGAGAGGCGTGTGGAGCAGGCATGGTTCCCATCCTTAGCCTGCAGTCAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 248887 260 + 180051392 TGTTGCTTGTGGCTGGGTGACTTAACTTCTGCCAAC-GAGATTTGC-ACGGA-CACGGCACGGGCAGAAGCCTGGAATGTGCGGGCACTGCCAGGCCTGCCCTCTAAGGCTCTTGATTTTCCCCACGAGGTGCTGCCAGGCCTGCCCTCTAAGGCTCTTGATTTTCCCCACGAGATGCG-TGTGCCCCGGGGAACA---GCGGCTCTGGCTGCAGGATGAGAGGCGTGTGGAGCACACATGGTTCCCACGCTCAGCCTGGAGTCAAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 70353 260 - 100774 TGTTGCTCGTGGCTGGGTGACTTAACTTCTGCCAAC-GAAATTTGC-ACGGA-CACGGCACAAGCAGAAGCCTGGAATGTGCGGGCACTGCCAGGCCTGCCCTCTAAGGCTCTTGATTTTCCCCACGAGGTGCTGCCAGGCCTGCCCTCTAAGGCTCTTGATTTTCCCCACGAGATGCG-CGTGCCCCGGGGAACA---GCGGCTCTGGCTGCAGGATGAGAGGCGTGTGGAGCACACATGGTTCCCATGCTCAGCCTGGAGTCAAG i macNem1.NW_012013899v1 C 0 M 4490 s cerAty1.NW_012009470v1 16194528 213 + 16742782 TGTG--CCGTGGCTGGGTGACTT-GCTTCTGCCAACAGAGATTTGCAACGGACCACGGCACAAGCAGAA-CCTGGAATGTGC-GGCACTGCCAGGCCTG----------------------------------------------CCTCTAGCGCTCTTGATTTTCCCCACG-GATGCGCCGTGCCTCCGGAAACAGGTGCGGCTCTGGCTGCAGGATGAGAGGCGTGTGGAGCACACATGGTTCCCACGCTCG--CTTGAGTCAAG i cerAty1.NW_012009470v1 C 0 I 2 s chlSab2.chr4 89545989 214 - 91010382 TGTTGCTTGtggctgggtgactt-gcttctgccaac-gagatttgc-acaga-cacggcacaagcagaagccttgaatgtgcgggcactgccaggcctg---------------------------------------------ccctctAAGGCTCTTGATTTTCCCCATGAGATGCG-CGTGCCCCAGGGAACA---GCGGCTCTGGCTGCAGGATGAGAGGCGTGTGGAGCACACATGGTTCCCACGCTCAGCCTGGAGTCAAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6143005 214 + 6207128 TGTTGCTTGTGGCGGGGTGACTT-GCTTCTGCCAAC-GAGATTTGC-ACAGA-CACGGCACAAGCAGAAGCCTGGAATGTGCGGGCACTGCCAGGCCTG---------------------------------------------CCCTCTAAAGCTCTTGATTTTCCCCACGAGATGCG-CCTGCCCCGGGGAACA---GCATCTCTGGCTGCAGAATGAGAGGCGTGTGGAGCACACATGGTTCCCACGCTCAGCCTGGAGTCAAG i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41952999 194 + 159171411 TGCTGCTTGTGCCTGGGTGATTT--------------TA--------ATAGA-CACTGCACAAGCAGAAGCCTGAAATGTGTTGGCACTGCCAGGCCTG---------------------------------------------CCCTCTAATGCTCTTGATTTTTCCCATGAGATGAG-TGTGCCCCAGGGAACG---TCGGCTCCAACTGCAGGTTGAGAGGCATGTGGAGCACGCATGGTT-CCACCCTCAGCCTGGAGTCAAG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=361063.000000 s hg38.chr3_KI270779v1_alt 13136 134 + 205312 GCCAGACTAGATCAGCCTAAGCCCAGCCACGCCACGGGT-GCAGGAGTGAAGAGCAAATGCTAA-----CTGTCCATGGAATTGAC-TTTCAAAGGGGC-GTGTCATGT-----GCCTCATCCCAGCAACAGGGAAGGCATTTCTCT s panTro5.chr3 200005334 134 + 202621043 GCCAGACTAGATCAGCCTAAGCCCAGCCACGCCATGGGT-GCAGGAGTGAAGAGCAAATGCTAA-----CTGTCCATGGAATTGAC-TTTCAAAGGGGC-GTGTCATGT-----GCCTCATCCCAGCAACAGGGAAGGCATTTCTCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 836801 134 - 880730 CCCAGAATAGATCAGCCTAAGCCCAGCCACGCCACAGGT-GCAGGAGTGAAGAGCAAATGCTAA-----CTGTCCATGGAATTGAC-TTTCAAAGGGGC-GTGTCATGT-----GCCTCATCCCAGCAACAGGGAAGGCATTTCTCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776083 134 + 123690457 CCCAGACTAGATGAGCCTAAGCCCAGCCACGCCACGGGT-GCAGGAGTGAAGAGCAAATGCTAA-----CTGTCCATGGAATTGAC-TTTCAAAGGGGC-GTGTCATGT-----GCCTCATCCCAGCAACAGTGAAGGCATTTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 249147 139 + 180051392 CCCAGACTAGATCAGCCTAAGCCCAGCCACGCCACGGGT-GCAGGAGTGAAGAGCAAATGCTAACTGTCCTGTCCATGACAGTGGC-TTTCAAAGGGGC-GTGTCGTGT-----GCCTCATCCCAGCAACAGTGACGGCATTTCTCT i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16194743 131 + 16742782 CCCAGACTAGATGAG-CTAAG--CAGCCACGCCACGGGTGGCAGGAGTTGAGAGCAAACGCTAA-----CTGTCCATGACAGTGGCTTTTCAAAGGGGCGGTGTCG-GT-----GC--CATCCCAGCAACAGTGACGGCATTTCTCT i cerAty1.NW_012009470v1 I 2 I 43 s chlSab2.chr4 89546203 134 - 91010382 CCCAGACTAGATCAGCCTAAGCCCAGCCACACCACGGGT-GCAGGAGTGAAGAGCAAATGCTAA-----CTGTCCATGACAGTGGC-TTTCAAAGGGGC-ATGTCAGGT-----GCCTTATCCCAGCAACGGTGACGGCATTTCTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6143219 134 + 6207128 CCCAGACTAGATCAGCCTAAGCCCAGCCACGCCACGGGT-GCAGGAGTGAAGAGCAAATGCTAA-----CTGTCCATGACAGTGGC-TTTCAGAGGGGC-GTGTCGTGT-----GCCTCATCCCAGCAACAGTGACGGCATTTCTCT i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41953193 139 + 159171411 TCCAGACTAGATCAGCCTCAGCCCAGCCAAGCCCCGGGT-GCAGGAGTGAAAAGCAAATGCTAA-----CGGCCCATGACACTGAC-TTTCAAAGGGGA-GTGTCCTGTCACGGGCTTCCTCCCAGCAACAATGAAGGTGTTTCTCT i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=98200.000000 s hg38.chr3_KI270779v1_alt 13270 43 + 205312 ATCAGTCAGTTGGTAAATGATTATTGACAAACAATgtgctggg s panTro5.chr3 200005468 43 + 202621043 ATCAGTCAGTTGGTAAATGATTATTGACAAACAATGTGCTGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 836935 43 - 880730 ATCAGTCAGTTGGTAAATGATTATTGACAAACAATGTGCTGGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776217 43 + 123690457 ATCAGTCAGTTGGTAAATGATTATTGACAAACAATGTGCTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 249286 43 + 180051392 Gtcagtcaatcggtaaatgattattgacaagcagtgtgctggg i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89546337 43 - 91010382 Atcagtcagtcagtaaatgattattgacaagcagtgtgctggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6143353 43 + 6207128 Gtcagtcagtcgataaatgattattgacaagcaatgtgctggg i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41953332 43 + 159171411 ATCAGTCAGTCGGTAAATAATTACCCACAAATAATGTGCTAGG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M e cerAty1.NW_012009470v1 16194874 43 + 16742782 I a score=68749.000000 s hg38.chr3_KI270779v1_alt 13313 25 + 205312 aaggtggagtgatttgagtagattt s panTro5.chr3 200005511 25 + 202621043 AAGGTGGAGTGATTTGAGTAGATTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 836978 25 - 880730 AAGGTGGAGTGATTTGAGTAGATTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776260 25 + 123690457 AAGGTGGACTGATTTGAGTAGATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 249329 25 + 180051392 aagctagagtgatttgagtagattt i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16194917 24 + 16742782 AAGGCAGAGTGATTTGAGTA-ATTT i cerAty1.NW_012009470v1 I 43 C 0 s chlSab2.chr4 89546380 25 - 91010382 aagctggagtgatttgagtagattt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6143396 25 + 6207128 aagctagagtgatttgagtagattt i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41953375 25 + 159171411 AAGGTGGAGCGATTTGAGTCgattt i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012118799v1 44564 2934 + 514179 M a score=363746.000000 s hg38.chr3_KI270779v1_alt 13338 118 + 205312 ggcctctattctcatggagcttcctttctagaggggaaggcagat----gatggatggataaatataaatgattctaataggttggtgcagc--agt---------------cattaaaagtaatgg-cgaaaaaaaaaa s panTro5.chr3 200005536 118 + 202621043 Ggcctctattctcatggagcttcctttctagaggggaaggcagat----gatggatggataaatataaatgattctaataggttggtgcagc--agt---------------cattaaaagtaatgg-caaaaaaaaaaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 837003 119 - 880730 Ggcctctattctcatggagcttcctttctagaggggaaggcagat----gatggatggataaatattaatgattctaacaggttggtgcagc--agt---------------cattaaaagtaatggaaaaaaaaaaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776285 118 + 123690457 GGCCTCTATTCTCATGGGGCTTCCTTTCTAGAGGGGCAGGCAGAT----GATGGATGGGTAAATATAAATGATGCTAATAGGTTGGTGCAGC--AGT---------------CATTAAAAGGAATGG-CAAAAAAAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 249354 114 + 180051392 ggcctctattctcatggagcttcctttctagaggggaaggcagatgatggatagatagataaatataaatgatgctaata-gttggggcagc--agt---------------cattaaaagtaatgg---aaaaa----- i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16194941 114 + 16742782 GGCCTCTATT-TCCTGGA-CTTCCTTTCTAGAGGGGAAGGCAGATAATGGATAG--AAAAAATAATAAATGATTCTAATA-GTTGGGGCAGCCAAGT---------------CATTAAAAGTAATGG-CAAAAAA----- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89546405 117 - 91010382 ggcctctgttctcatggagcttcctttctagaggggaaggcagat----gatggatgaataaatataaatgattctaataggttggggcagc--agt---------------cattaaaagtaatgg-caaaaaaaaaa- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6143421 121 + 6207128 ggcctctattctcctggagcttcctttctagaggggaaggcagataatggatagatagataaatataaatgattctaata-gttggggcagc--agt---------------cattaaaagtaatgg-caaaaaaaaaaA i manLeu1.NW_012109696v1 C 0 I 2005 s colAng1.NW_012118799v1 47498 122 + 514179 Ggcctctattctcatggagcttcctttctagaggggaaggcagatgatggatagatagataaatataaatgattctaataggttggggcagc--agt---------------cattaaaagtaatgg-caaaaaaaaaaa i colAng1.NW_012118799v1 M 2934 C 0 s calJac3.chr5 41953400 128 + 159171411 ggtccctatactcgtggagcttgctttctagaggggaagacagat----gatggatgaataaatataaaTGATTCTAttaggttggtgcagc--agtaattctggtttttgccgttaaaagtaatgg-caataaA----- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T a score=1339763.000000 s hg38.chr3_KI270779v1_alt 13456 534 + 205312 caaaagaaacggggaGGAGCCGTTGCTGCCGTTcattaa-tagtaatggc-aaaacccgcg-atga-cttgtgcg-ccaacctaaCCCAGTAACCACGG-GTGTGC-AAATGTGG--------CAATGGGCAAGTTCCGAGTGC-TAGGAGAGCATCTAGCTTCCCGGAGTCAGGAGACGGGGGTTG-GCAACCTAACCAAG-GTTAAGTCCAAGTGAGGGGGGTGGGCagggagcgatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgat--------agggtgtttgtctggcacagagaagagcctgtgcaaaagctggtggggtgagaggacaccgtgtattcatccacctgaggggcgaccagcaggctggagctcagtgggttgagaggaggatgCAGAGCCCgggaaaggcaccctaggcagagggcacagaagcg-caaaggcctggagtgaggcctgagcctgtgtggtttgaggaacggacagaggcctgtccgtcaggaagggaacggcaccggggagagaccttaggcca s panTro5.chr3 200005654 533 + 202621043 agaaagaaacggggaGGAGCCGTTGCtgcagttcatgaa-tagtaatggc-aaaacccgcg-atga-cttgtgcg-ccaacctaaCCCAGTAACCAGGG-GTGTGC-AAATGTGG--------CGATGGGCAAGTTCCGAGTGC-TAGGAGAGCATCTAGCTTCCCGGAGTCAGGAGACGGGGGTTG-GCAACCTAACCAAG-GTTAAGTCCAagggagggggttgggcagggagcgatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgat--------agggtgtttgtctggcacagagaagagcctgtgcaaaagctggtggggtgagaggacaccgtgtgttcatccacctgaggggcgaccagcaggctggagctcagcgggttgagaggaggatgCagagcccgggaaaggcaccctaggcagagggcacagaaggg-caaaggcctggagtgaggcctgagcc-gtgtggtttgaggaacggacagaggcctgtccgtcaggaagggaacggcacaggggagagACCTTAGGCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 837122 534 - 880730 caaaagaaacggggagGAGCCGGTGCTGCAGTTcattaa-tagtaatggc-aaaacccgcg-atga-cttgtgca-ccaacctaa-CCAGTAACCACGG-GTTTGC-AAATGTGG--------CGATGGGCAAGTTCCGGGTGC-TAGGAGAGCATCTAGCTT-CCggagtcaggagacgggggttg-gcaacctaaccaag-gttaagtccaagggaggggggtgggcagggagcgatatttcagtggagactgcaaggatgaatggtatttag-agagtaaaccccgat----agagagggtgtgtgtctggcacagagaagagcctctgcaaaagctggtggggcgagaggacaccgtgtgttcatccacctgaggggcgaccagcaggctggagctcagcgggttgagaggaggatgcagtgcctgggaaaggcaccctaggcagagggcacagaaggg-caaaggcctggagtcaggcctgagcctgtgtggtttgaggaacggacagaggcctgtccatcaggaagggaacggcacaggggagagaccttaggc-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776403 536 + 123690457 -AGAAGAAATGGGGAGGAGCCGCTGCtgcagttcattaa-tagtaatggc-aaaaaccgcg-atga-cttgtgcc-ccaacctaaCACAGTAACCACGG-GTGTGCAAAATGTGG--------CAATTGGGAAGTTCCGAGTGC-TAGGAGAGCATCTAGCTTCCCGGCGTCAGGACACGGGGGTTG-GCAACCTAACCAAG-GTTAAGTCCAAGTGAGGAGGGTGGGCagggagcgatatttcagtggagactccaaggatgaatggtatttag-agatgaaaccccgat----agagagggtgtgtgtctggcacagagaagagcctgtgcaaaagccggcggggcgagaggacaccgtgtgttcctccacctgaggggcgaccagcaggctggagctcagcgggttgagaggaggatgcagagcccgggaaaggcaccctaggcagagggcacagcaggg-caaaggcctggagtcgggcccgagcctgtgtggtttgaggaacggacagaggcctgtctggcaggaagggaacggcacaggggagagacctgaggc-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 249468 536 + 180051392 aaaaaaaagtgggaaggagCTGGTGCtgcagttcgttaa-tagtaatggc-aaaaatctcg-atga-cttctgca-ccaacctaaCACAGTAATCACGG-GTGTGCAAAATGTGG--------CAATGGGGAAGTTCCAAGTGC-TAGGATGGCATCTGGCTTCCTGGAGTCTGGAGATGG--GTTG-GCAACCTAACCAAG-GTTAAGTCCCAGTGAGGGGG-TGGGcagggagcgatatttcagtggagactccaaggatgaatgctatttag-agagtaaaccctgatagtgagagggggagtgtgtctggcacagagaagagcctatgccaaggccggtggggcgggaggacaccatgtgttcatccacctgaggggcgaccagcaggctggagctgagtgagttaagaggaggatgtggagccggggaaaggcaccccaggcagagggcacagcaggg-gaaaggttcggagtcaggcctgag--tctgtggtttggggaactgacagaggcctgtctggcaggaagggaatggcagaggggagagaccttaagc-- i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16195055 548 + 16742782 AAAAAAAAAGGGGAAGGAGCTGGTGCTGCAG-TCGTTAATTAGTAATGGCGAAAAACCGCGTATGACCCTCTGCACCCAACCTAACACAGTAATCACGGCGTGTGCAAAATGTGGGAAAAAAACAATGGG---GTTCAAGGTGCGTAGGATGGCA-CTGGCTTCCT-GAGTC-GGAGACGG-CGTTGAGCAACCTAACCAGGTAATAAGTCCCAGTGAGGGGG-TGGACaggagcgaatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgatagtgagagggggagtgtttctggcacagagaagagcc--tgtccaggcc-gtggggcgggaggacaccatgtgttcatccacctgaggggcgaccagcaggctggagctgagtgagttaagaggaggatgtggagcccaggaaaggcaccccaggcagagggcacagcaggg-gaaaggtccagagtcaggcctgagcctctgtggtttggggaactggcagaggcctgtccgggaggaagggaatggcagagggaagagaccttaggcca i cerAty1.NW_012009470v1 C 0 I 127 s chlSab2.chr4 89546522 534 - 91010382 ----aaaagtgggaaggagCTGGTGCTGCAGTTcgttaa-tagtaatggc-aaaaaccgtg-atga-cttctgca-ccaacctaaCACAGTAATCACGG-GTGTGCAAAATGTGG--------CAATGGGGGAGTTCCAAGTGC-TAGGATGGCATCTGGCTTCCTGGTGTCAGGAGATGG--GTTG-GCAACCTAACCAAG-GTTAAGTCCCAGTGCGGGGG-TGGGcagggagcgatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgatagtgagagggggagtgtgtctggcacggagaagagcctatgccaaggccggtggggcgggaggacaccatgtgttcatccacctgaggggcaaccagcaggctggagctgagtgagttaagaggaggatgtggagctggggaaaggcaccccaggcagagggcacagcaggg-gaaaggtccggagtcaggcctgagcctctgtggtttggggaactggcagaggcctgtccaggaggaagggaatggcagaggggagagaccttaggc-- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012118799v1 47620 533 + 514179 -----aaagtgggaaggagCTGGTGCtgcagttcgttaa-tagtaatggc-aaaaaccacg-atga-cttctgca-ccaacctaaCACAGTAATCACAG-GTGTGAAAAATGTGG--------CAATGGGGGAGTTCCAAGTGC-TAGGATGGCATCTGGCTTCCTGGAGTCAGGAGATGG--GTTG-TCAACCTAACAAAG-GTTAAGTCCCAGTGAGGGGG-TGGGCagggagcgatacttcagtggagactccaaggatgaatggtatttag-ggagtaaaccccgatagtgagagggggagtgtgtctggcacagagaagagcctgtgtgaaggctggtggggcgggaggacaccgtgtgttcatccacctgaggggcgaccagcaggctggagctgagtgagttaagaggaggatgtggagcccgggaaaggcaccccaggcagagggcacagcaggg-gaaaggtccggagtcaggcctgagcctctgtggtttcgggaactgacagaggcctgtctggcaggaagggaatggcagaggggagagaccttaggc-- i colAng1.NW_012118799v1 C 0 I 2 s calJac3.chr5 41953528 532 + 159171411 ------AAGCGGGTAGGAGCTGGTGCTGCAGTTcattaa-aagtaacagc-aaaaactgcg-gtaa-cttccgca-ccaacctaaTAGAATAATTACGA-GCGTGCAAAACGTTG--------CAATGGGCAAGTTCCAAGTGC-TGGGATGGCATCTAGCTTCCTGGAGTCAGGAGACAGGGTTTG-GCAACCTAGCCAAG-GTTAAGTCCAAGTGATGGGGGCGGGCagggagcgatatttcagtggagactccaaggatgactggtaattagaaaagtaaacccagatgtgaaagggggaagcatttcaggcaaagagaagagtgtgtgcaaaggcctatggg--aggaggacattgtgtatctatcaaccttcggggcaaccagcaggctggagctgagcacgttgagaggaggacg-ggagccggggaaaggcaacccaggcaga-ggcatagcagggacaaaagcctggagtcaggcctgaacctgtgtggtttgaggaaccgacagaggcctgtccgacaggaaagtaacagcagaggggaga-ccattaggc-- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6143542 2005 + 6207128 I a score=2469.000000 s hg38.chr3_KI270779v1_alt 13990 10 + 205312 cagcagaggg s panTro5.chr3 200006187 10 + 202621043 CAgcagaggg i panTro5.chr3 C 0 C 0 s colAng1.NW_012118799v1 48155 10 + 514179 gagcagaggg i colAng1.NW_012118799v1 I 2 N 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e calJac3.chr5 41954060 0 + 159171411 C e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6143542 2005 + 6207128 I e chlSab2.chr4 89547056 0 - 91010382 C e cerAty1.NW_012009470v1 16195603 127 + 16742782 I e rheMac8.chr6 250004 0 + 180051392 C e nomLeu3.chr11 120776939 0 + 123690457 C e gorGor5.CYUI01015759v1 837656 0 - 880730 C a score=169884.000000 s hg38.chr3_KI270779v1_alt 14000 46 + 205312 cagggcagagggcagggccgtgctgggcactgtgggctgtggatgg s panTro5.chr3 200006197 46 + 202621043 cagggcagagggcagggccgtgctgggcaCTGTGGGCTGTGGATGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 837656 46 - 880730 cagagcagagggcagggccgtgctgggcactgtgggctgtggatgg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776939 46 + 123690457 cagagcagagggcagggctgtgctgggcactgtgggcTGTGGATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250004 46 + 180051392 cagagcagagggcagggccgtgctgggcactgtgggctgtggatgg i rheMac8.chr6 C 0 I 130 s cerAty1.NW_012009470v1 16195730 46 + 16742782 CAGGGTAGAGGGCAGGGCCGTGCCGGGCACTGTGGGCTGTGGCTAG i cerAty1.NW_012009470v1 I 127 I 1 s chlSab2.chr4 89547056 46 - 91010382 cagagtagacggcagggccgtgccgggcactgtgggctctggatgg i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012109696v1 6145547 46 + 6207128 CAGGGTAGAGGGCAGGGCCGTGTCGGGCACTGTGGGCTGTGGATGG i manLeu1.NW_012109696v1 I 2005 I 1 s colAng1.NW_012116910v1 840169 46 + 1687011 CAGGGTAGAGGGCAGGGCCGTGCTGGGCACTGTAGAATATAGATGG i colAng1.NW_012116910v1 N 0 I 1 s calJac3.chr5 41954060 44 + 159171411 cagggcagagggcagggccatgctgggcactgtgggctgtggat-- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T a score=74419.000000 s hg38.chr3_KI270779v1_alt 14046 26 + 205312 tgctggcatttaagaggggagaccaT s panTro5.chr3 200006243 26 + 202621043 TGCTGGCATTTAAGAGGGGAGACCAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 837702 26 - 880730 tgctggcatttaagaggggagaccat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120776985 26 + 123690457 TGCTGGCATTTCAGAGGGGAGACCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250180 26 + 180051392 TGCTGGCACGTAAGAGGGGAATCCAC i rheMac8.chr6 I 130 C 0 s cerAty1.NW_012009470v1 16195777 26 + 16742782 TGCTGGCATGTAAGAGGGGAGTCCAC i cerAty1.NW_012009470v1 I 1 C 0 s chlSab2.chr4 89547103 26 - 91010382 tgctggcatttaAGAGGGGAGACCAT i chlSab2.chr4 I 1 I 2373 s manLeu1.NW_012109696v1 6145594 26 + 6207128 TGCTGGCATGTAAGAGGGGAGTCCAC i manLeu1.NW_012109696v1 I 1 C 0 s colAng1.NW_012116910v1 840216 26 + 1687011 TGCTGGCATTTAAGGGGGGAGTCCAC i colAng1.NW_012116910v1 I 1 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e calJac3.chr5 41954104 0 + 159171411 C e saiBol1.JH378155 147144 48915 - 16417988 T a score=766771.000000 s hg38.chr3_KI270779v1_alt 14072 239 + 205312 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCGTGCTGGGCACTTCGGGCTGTGGATGGGAGCTGGCATTTATGCTCAGGTGATGGGAATGTGTTAAAAGATTTTAAGGAGGGGAGTAACAGTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCATAAGACTTCTGCACAGGCAGAGAGAAATAAGATCATGTCTACAGCTGTGTGAT--GATTTTATTGAAA-A s panTro5.chr3 200006269 239 + 202621043 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCGTGCTGGGCACTTTGGGCTGTGGATGGGAGCTGACATTTATGCTCAGGTGATGGGAATGTGTTAAAAGATTTTAAGGAGGGGAGTAACAGTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCATAAGACTTCTGCACAGGCAGAGAGAAATAAGATCGTGTCTACAGCTGTGTGAT--GATTTTATTGAAA-A i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 837728 286 - 880730 agaccagggcagaggggtgGAGAGGGCCGAGCCgggcacgagagaggagaccataggcgagggcagagg---gcagGGCCGTGCTGGGCACTTTGGGCTGTGGATGGGAGCTGGCATTTATGCTTGGGTGAT-GGAATATGTTAAAAGATTTTAAGGAGGGGAGTAACATTTGGGATTAACGTGTATTCTGGGAATCTCAACACGGTAAATTC--AGTTTGAATTTTCATAAGACTTCTGCAAAGGCAGAGAGAAATAAGATCGTGTCTACAGCTGTGTGAT--CATATTTT----A-A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777011 239 + 123690457 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCGTGCCGGGCACTTTGGGCTGTGGATGGGAGCTGGCATTTATGCTCAGGTGATGGGAATATGTTAAAAGATTTTAAGGAGGGGAATAGCAGTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCATAAGACTTCTGCACAGGGAGAGAGAAATAAGATCGCGTCTACAGCTGTGTGAT--GATTTTATGTAAA-A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250206 238 + 180051392 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCATCCTGGATACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTTGAGTGATGGGAACATGTTAAAAAATTTTAAGGAGGGGAGTAACATTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTTAATTTTCACAAGACTTCTGTACAGGCAGAGAGAAATAAGATCGCGTCTACGGCTGTGTGTT--GATTATATTAAAA-- i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16195803 238 + 16742782 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCATCCTGGACACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTTGAGTGATGGGAACATGTTAAAAGATTTTAAGGAGGGTAGTAACATTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAATTTGAATTTTCACAAGACTTCTGTACAGGCAGAGAGAAATAAGATCACGTCTACGGCTGTGTGTT--GATTATATTAAAA-- i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89549502 238 - 91010382 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCATCCTGGACACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTCGAGTGATAGGAACATGTTAAAAGATTTTAAGGAGGGGAGTAACATTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCACAAGACTTCTGTACAGGCAGAGAGAAATAAGATCGCGTCTACGGCTGTGTGTT--GATTATATTAAAA-- i chlSab2.chr4 I 2373 C 0 s manLeu1.NW_012109696v1 6145620 238 + 6207128 AGACC------------------------------------------------------AGGGCAGAGG---GCAGGGCCATCCTGGACACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTTGAGTGATGGGAACATGTTAAAAGATTTTAAGGAGGGTAGTAACATTTTGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCACAAGACTTCTGTACAGGCAGAGAGAAATAAGATCGTGTCTACGGCTGTGTGTT--GATTATATTAAAA-- i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 840242 242 + 1687011 AGACC------------------------------------------------------AGGGCAGAGGGCAGCAGGGCCATGCTGGACACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTGGGGTGATGGGAACGTGTTAAAAGATTTTAAGAAGGGGAGTAACATTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCACAAGACTTCTACACAGGCAGAGAGAAATAAGATCACGTCTACGGTTGTGTGTT--GATTATATTAAAAA- i colAng1.NW_012116910v1 C 0 I 305 s calJac3.chr5 41954104 192 + 159171411 ---------------------------------------------------------------------------------------------------------gggagctggcatttatgctccggtgagggggacatgttagaagcttttaaggagggcagtaacatTTGGGGATAATATGTATTCCGGGAATGCCAACAAAGTGAATTCATAGTTTGGATGTTCCTAAGACTTCTGCACAGGCACAGAGAAATAAGATCATTTCTACAGCTGTGAGATAAGATTATATTAAAA-- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T a score=10799.000000 s hg38.chr3_KI270779v1_alt 14311 6 + 205312 ACATTA s panTro5.chr3 200006508 6 + 202621043 ACATTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838014 6 - 880730 AAATTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777250 6 + 123690457 ATACTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250444 6 + 180051392 ATATTT i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16196041 6 + 16742782 ATATTT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89549740 6 - 91010382 ATATTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6145858 6 + 6207128 ATATTT i manLeu1.NW_012109696v1 C 0 C 0 s calJac3.chr5 41954296 6 + 159171411 ATATTG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 840484 305 + 1687011 I a score=624865.000000 s hg38.chr3_KI270779v1_alt 14317 177 + 205312 CTAAGTTTTTAAACGTGATTTCAAATGGTGTGTTTCTGTTTCACCTT-GGACATAAGTAGATTGCAAGGCTAATGGAAAGTAGAAAAGTTAATT------CATGAACATAAAAGAGATATCAATTTGAAAACAAAACGTTTATTCATTTACTTCCGCTGCAGATTTCTTGACTGCTGAATTTCA s panTro5.chr3 200006514 177 + 202621043 CTAAGTTTTTAAACGTGATTTCAAATGGTGTGTTTCTGTTTCACATT-GGACATAAGTAGATTGCAAGGCTAATGGAAAGTAGAAAAGTTAACT------CATGAACATAAAAGAGATATCAATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGATTTCTTGACTGCTGAATTTCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838020 183 - 880730 CTAAGTTTTTAAACGTGTTTTCAAATGGTGTGTTTCTATCTCACATT-GGACATAAGTAGATTGCAAGATTAATGGAAAGTAGAATAGTTAACTGACTTGCCTGAACATAAAAGAGACATCGATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGTTTTCTTGACTGCTGAATTTCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777256 177 + 123690457 CTAAGTTTTTAAACGTGATTTCAAATGGTGCGTTTCTGTTTCACATT-GGGCATAAGTAGATTGCAAGGCTAATGGAAAATAGAAAAGTTAACT------GATGAACATAAAAGAGATACCGATTTGAAAACAAAACATTTATTCATTTACTTCAGCTGCAGTTTTGTTGACTGCTGAATTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250450 177 + 180051392 CTAAGTTTTTAAACGTCATTTCAAATGCTGTGTTTCTATCTCACATT-GGACATAAGTAGATTACAAGTTTAATGGAAAGTGGAAAAGTTAACT------CATGAACATAAAAGAGATACAGATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGTTTTCTTGACTGCTGAATTTCG i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16196047 177 + 16742782 CTAAGTTTTTAAACGTCAGTTCAAATGCTGTGTTTCTATCTCACATT-GGACATAAGTAGATTACAAGTTTAATGGAAAGTGGAAAAGTTAACT------CATGAACATAAAAGAGATATCGATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGTTTTCTTGACTGCTGAATTTCG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89549746 175 - 91010382 CTAAGTTTTTAAACGTCATTTCAACTGGTGTGTT--TGTCTCACATT-GGACATAAGTAGATTACAAGGTTAATGGAAAGTGGAAAAGTTAAGT------CATGAACATAAAAGATACATCGATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGTTTTCTTGACTGCTGAATTTCG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6145864 177 + 6207128 CTAAGTTTTTAAACGTCATTTCAACTGGTGTGTTTCTGTCTCACATT-GGACATAAGTAGATTACAAGTTTAATGGAAAGTGGAAAAGTTAACT------CATGAACATAAAAGAGATATCGATTTGAAAACAAAACATTTATTCATTTACTTCTGCTGCAGTTTTCTTGACTGCTGAATTTCG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 840789 177 + 1687011 CTAAGTTTTTAAACGTCATTTCAAATGCTGTGTTTCTATCTCACATT-GGACATAAGTAGATTACAAGGTTACTGGAAAGTAGAAAAGTTAACT------CATGAACATAAAAGATACATCGATTTGAAAACAAAACATTTATTCATTTACTTCGGCTGCAGTTTTCTTGACTGCTGAATTTCG i colAng1.NW_012116910v1 I 305 C 0 s calJac3.chr5 41954302 184 + 159171411 CTAAGTTTTTAAAGGTCATTTCGAATGGTGGATTTCTATCTTACATTAGGACATAGGTAGGTTGCAAGGTTGACAGCAAGTAGAAAAGTTTCCTGACTCGTGTGAACATAAAAGAAACATCGATTTGAAAGCAAAACATTTATTCATTTACTTCCTCTGCAGTTTTCTTGACTGCTGAATTTCA i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 70613 4490 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T a score=984138.000000 s hg38.chr3_KI270779v1_alt 14494 257 + 205312 TGAGAAGGGATTGTTCAGGGAGGGACATGGGGCTGAAGACCTGGAGAGGAGGTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGATGGAGCCTTGGGGAGGAGCAGGTGCTGCCTTTTAA---GTCTATGAGAGTCGTTGAGCTGGAGGTCCAGGGAGGAGCCAGTGCTCCCACTGATGTCTTAGGttgtggagctgaagacaatgaaggagccagtgtggctgt---tctgtgagactcgtggagctggagatccagg s panTro5.chr3 200006691 257 + 202621043 TGAGAAGGGATTGTTCAGGGAGGGACGTGGGGCTGAAGACCTGGAGAGGAGGTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGAAGATGGAGCCTTGGGGAGGAGCAGGTGCTGCCTTTTAA---GTCTATGAGAGTCGTTGAGCTGGAGGTCCAGGGAGGAGCCGGTGCTCCCACTGATGTCTTAGGttgtggagctgaagacaacgaaggagccagtgtggctgt---tctgtgagactcgtggagctggagatccagg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838203 257 - 880730 CGAGAAGGGATTGTTCAGGGAGGGACGTGGGGCTGAAGACCTGGAGAGGAGCTGTTGCTACCGCTGTTCAAATCCGAGGGTGGTGGAGATGGAGCTTTGGGGAGGAGCAGGTGCTGCCTTTTAA---GTCTATGAGAGTCGTTGAGCTGGACGTCCAGGGAGGAGCCGGTGCTGCCACTGATGTCTTAGGTTGTGGAGCTGAAGACAATGAAGGAGGCAGTGTGGCTGT---TCTGTGAGACTCGTGGAGCTGGAGATCCAGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777433 254 + 123690457 TGAGAAGGGATTGTTCCGGGAGGGTCGTGGGGCTGAAGACCTGGAGAGGAGCTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGATGGGGCCTTGGGGAGCAACAGGTGCTGCCCTTTAA---GTC--TGAGAGTCATTGAGCTGGACGTCCAGGGAGGAGCCGGTGCTGCCGCTGATGTCTTAGGTTGAGGAGCTGAAGACAATGAAGGAGCCAGTGTGGCTGT---TGTGTGAGGGTCGTGGAGCTGGAGAT-CAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250627 261 + 180051392 TGAGAAGGGATTGTTCAGGGAGGGttgtggggctgaagacccggacaggagctggtgctaccgctgttcaaatctgaaggtggtggagctggagccttggggaggagCCGACGCTGCCTTTAAGTCTGCC--TGAGAGTCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTCTTAGGttgtggagctgaagacagtgaaggagccggtgtggctattcctctgtgagggtcgtggagctggagatccagg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 75104 261 - 100774 TGAGAAGGGATTGTTCAGGGAGGGttgtggggctgaagacccggacaggagctggtgctaccgctgttcaaatctgaaggtggtggagctggagccttggggaggagCCGACGCTGCCTTTAAGTCTGCC--TGAGAGTCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTCTTAGGttgtggagctgaagacagtgaaggagccggtgtggctattcctctgtgagggtcgtggagctggagatccagg i macNem1.NW_012013899v1 M 4490 C 0 s cerAty1.NW_012009470v1 16196224 261 + 16742782 TGAGAAGGGATTGTTCAGGGAGGGTTGTGGGGCTGAAGACCCGGACAAGAGCTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGCTGGAGCCTTGGGGAGGAGCCGACGCTGCCTTTAAGTCTGCC--TGAGAATCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTTTTAGGTTGTGGAGCTGAAGACAGTGGAGGAGCCAGTGTGGCTATTCCTCTGTGAGGGTCGTGGagctggagatccagg i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89549921 255 - 91010382 TGAGAAGGGATTGTTCAGGGAGGGttgtggggctgaagacccgggcaggagctggtgctaccgctgttcaaatctgag---ggtggagctggagccttggggaggagCCGACGCTGCCTTTTAA---GTC--TAAGAGTCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTCTTAGGTTGTGGAGCTGAAGACAGTGAAGGAGCTGGTGTGGCTGTTCCTCTGTGAGGGTCGTGGagctggagatccagg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6146041 261 + 6207128 TGAGAAGGGATTGTTCAGGGAGGGTTGTGGGGCTGAAGACCCGGACAGGAGTTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGCTGGAGCCTTGGGGAGGAGCCAACGCTGCCTTTAAGTCTGCC--TGAGAATCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTCTTAGGTTGTGGAGCTGAAGACAGTGAAGGAGCCAGTGTGGCTATTCCTCTGTGAGGGTCGTGGagctggagatccagg i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 840966 258 + 1687011 TGAGAAGGGATTGTTCAGGGAGGGTTGTGGGGCTAAAGACCCGGACAGGAGCTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGCTGGAGCCTTGGGGAGGAGCCAACGCTGCCTTGTAA---GTC--TGAGAGTCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTCTTAGGTTGTGGAGCTGAAGACAGTGAAGGAGCCGGTGTGGCTGTTCCTCTGTGAGGGTCGTGGagccggagatccagg i colAng1.NW_012116910v1 C 0 I 185 s calJac3.chr5 41954486 208 + 159171411 TGAGAAGGGATTGGTAATGAGG------------------------------------TGCTGTCTTTCAAGTATGAGAGTTGTTGAGCTGGAGGTGCAAGGAAG------TGCTGCTGTtcta---ggg--ggagggttgtcgagctggagacccagggaggtgc-agtgttgtt-ctagt-tcgagggtcatggagctggaaacccagggaggagtggtggtgtttt---tgtttgagagtcgtggagctggagaccca-- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T a score=33295.000000 s hg38.chr3_KI270779v1_alt 14751 11 + 205312 tgggagaggtg s panTro5.chr3 200006948 11 + 202621043 tgggagaggtg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838460 11 - 880730 TGGGACAGGTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777687 11 + 123690457 TGGGAGAGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250888 10 + 180051392 -gggagaggtg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 75365 10 - 100774 -gggagaggtg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16196485 10 + 16742782 -gggagaggtg i cerAty1.NW_012009470v1 C 0 I 547 s chlSab2.chr4 89550176 10 - 91010382 -gggagaggtg i chlSab2.chr4 C 0 I 1584 s manLeu1.NW_012109696v1 6146302 10 + 6207128 -gggagaggtg i manLeu1.NW_012109696v1 C 0 I 30692 s calJac3.chr5 41954694 8 + 159171411 ---cagaggag i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I a score=1664.000000 s hg38.chr3_KI270779v1_alt 14762 15 + 205312 ttttagctcggggaa s panTro5.chr3 200006959 15 + 202621043 ttTTAGCTCGGGgaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838471 15 - 880730 TTCTAGCTCGGGGAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777698 15 + 123690457 TTCTAGCTCGGGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250898 6 + 180051392 atctag--------- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 75375 6 - 100774 atctag--------- i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr5 41954702 8 + 159171411 ctgcggtt------- i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89550186 1584 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I a score=134235.000000 s hg38.chr3_KI270779v1_alt 14777 101 + 205312 gagctgatgttctaccttgagggtcgtgcagctgcagacccggggaggagctga------tgttct---agattgagggtc-----gtgcagctgcagacccggggaggagctga s panTro5.chr3 200006974 101 + 202621043 gagctgatgttctactttgagggtcctgcagctgcagacccggggaggagctga------tgttct---agtttgagtgtc-----atgcagctgcagacccagagaggagctga i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838486 100 - 880730 GAGCTGATGTTCTACCTTCAGGGCCCTGCagctgcaga-ccggagaggagctga------tgttct---agtttgaaggtc-----ttgcagctgcagatccggagaggagctga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777713 101 + 123690457 TAGCTGATGTTCTACCGTGAGGTCCCTGCAGctgcagacccggagaggcattga------tgttgt---agattgagggcc-----gtgtagctggagacccggtgaggagctga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 250904 89 + 180051392 ---------------tttgaggttcatgcagctgcagacccagagaggagctgg------cgtttctttagtttgagggtt-----gcacagctgtagaacccaggaggagctgg i rheMac8.chr6 C 0 I 29 s macNem1.NW_012013899v1 75381 89 - 100774 ---------------tttgaggttcatgcggctgcagacccagagaggagctgg------tgtttctttagtttgagggtt-----gcacagctgtagaacccaggaggagctgg i macNem1.NW_012013899v1 C 0 I 29 s chlSab2.chr4 89551770 100 - 91010382 gagctgatgttccagtttgagggccgtgcagctggag-cccagggctgagccga------cgttcc---agtttgagggct-----gtgtagctggagacccagcagggagctga i chlSab2.chr4 I 1584 C 0 s calJac3.chr5 41954710 110 + 159171411 --gttattgtttaagtctgaggATGGTGGAGCTGGAGCCCTGGGGAGGAGCTGGTGCTGCTGTTCT---TGTTTGAGGGTCTtgggttgaagctggagacccagggaggagccag i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I a score=28568.000000 s hg38.chr3_KI270779v1_alt 14878 34 + 205312 ---------tgttctagattgagggtcgtgcagctgcagaccc s panTro5.chr3 200007075 34 + 202621043 ---------tgttctagattgagggtcatgcacctgcagaccc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838586 34 - 880730 ---------tgttctagattgagggtcatgcagctgaagactc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777814 34 + 123690457 ---------tgttccagtttgaggatgttgcagctgcagacgt i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 89551870 34 - 91010382 ---------tgttccagtttgagggccgtgcagctgtagatct i chlSab2.chr4 C 0 C 0 s calJac3.chr5 41954820 43 + 159171411 tgttgtttttgtttaggtctgagggtcgtggagcttgagactc i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75470 29 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 250993 29 + 180051392 I a score=51680.000000 s hg38.chr3_KI270779v1_alt 14912 29 + 205312 ggggaggagctga------tgttctagattgaggg s panTro5.chr3 200007109 29 + 202621043 ggggaggaactga------tgttctagtttcagtg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 838620 29 - 880730 ggggaggagctga------tgttgtagtttgaggg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777848 29 + 123690457 ggagaggagccga------tgttctagtttggggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 251022 29 + 180051392 ggagaggagctca------tgttccagtttgaggg i rheMac8.chr6 I 29 C 0 s macNem1.NW_012013899v1 75499 29 - 100774 ggagaggagctca------tgttccagttggaggg i macNem1.NW_012013899v1 I 29 C 0 s chlSab2.chr4 89551904 28 - 91010382 -ggggggagctga------tgttccagtttgaggg i chlSab2.chr4 C 0 I 13243 s calJac3.chr5 41954863 35 + 159171411 tgggaggaactggtgccgttgttctagtttgaagg i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I a score=275655.000000 s hg38.chr3_KI270779v1_alt 14941 255 + 205312 tcgtgcagctgcagacccggg-------------------------------------------------gaggagctgatg---------ttctagattgagggtcgtgcagctgcagacccggggaggagctga------tgttctagattgagggtc-gtgcagctgcagacccggggagga------gctgatgttctagattgagggtcgtgcagctgcagacccggggaggagctgatg------ttctagattgagggtcgtgcagctgcagacccggggaggagctgatgtt---------ctagattgagggtcgtgcagctgcagacccgg- s panTro5.chr3 200007138 255 + 202621043 tcgtgcagctgcagacacggg-------------------------------------------------gaggagctgatg---------ttctagtttgagtgtcgtgcagctgcagacccggggaggagctga------tgttctagattaagtgtc-atgcagctgcagacccggggagga------gctgatgttctagtttgagtgtcgtgcagctgcagacccggagaggagctgatg------ttctagattgagggtcgtgcacctgcagacccggggaggagctgatgtt---------ctagtttgagggtctcccagctgcagacctgg- i panTro5.chr3 C 0 I 994 s gorGor5.CYUI01015759v1 838649 304 - 880730 tcgtgcagttgaggactcggggtggagCTGATATTGTTCGCGTTGAGGGTCTTTCagctggagactcagagaggagctgata---------atcttgattgagggtcatggagctggagacccggacaggagctga------tgttctagttagtggatc-ttccagctgcagacccaaggagga------gctgatgttctagttttaggttcttgcagctgcagacccggagaggagctgatg------ttctagattgagggtcatgcagctgaagactcggggaggagctgatgtt---------gtagtttgagggtcgcgctgttgaggactcgg- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120777877 254 + 123690457 tcttgcagccgaagacctggg-------------------------------------------------gaggagctgatg---------ttccggtttgaggatcttgcagccgcagacccggggaggagccga------tgttccggtttgagggtctttgcagccgtagaaccggggagaa------gctgatgttccggtttcagagtattgcagccgcggagccgtggaggagctgatg------ttccagtttgagggtcttgcagctgc-gacccgggaaggagctgatgtt---------ctggtttgagggtcttgcagctgc-gacccgg- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 251051 254 + 180051392 ccgtgcagctggagacccgag-------------------------------------------------gggcagctgatg---------ttccagtttgagggccgtgcagctggagacccgaggggcagctga------tgttccagtttgagggcc-gtgcagctggagacccggcgggga------gctgatgttccattttgagggccgtgcagctggatacctggcagggagctgatg------ttccagtttgagggccgtgcagctgtagatcc-gtggggagccaatgtt---------cgagtttgagggccgtgcagctggagccccgg- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 75528 255 - 100774 ccgtgcagctagagacccagc-------------------------------------------------ggggagctcatg---------ttccagtttgagggccgtgcagctggagacccgaggggcagctga------tgttccagtttgagggcc-atgcagctggagaccctacgggga------gctgatgttccatttttagggccgtgaagcaggatacctggcagggagctgatg------ttccagtttgagggccgtgcagctggagacccagcggggagctgatgtt---------ccagtttgagggctgtgctgctgtagatccag- i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr5 41954898 292 + 159171411 tcatagaactggagacccaga-------------------------------------------------caggagctggtgctactggtattcagatctgagggtggtggagctggagacccagggaggagCCGGTGCTGCTGTTCTTCTTTGAGGGTG-GTGGAGCTGGAGACCCAAGGTGCAGCTGCTGCTGCTGTTCTAGTGTGAGGGTCTTGGAGCTGGAGCCTTGGTGAGGAGCCGATGCTGCCTTTCAAGTCTGAGAGTCATTGAGCTGGAGATCCAGGGAGGAGCCGGTGCTATCACCATGCAATTCTGAGGGTCATGGAGATGATGGCCTCAG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I a score=64532.000000 s hg38.chr3_KI270779v1_alt 15196 63 + 205312 ggaggagctga---tgttctag-attgagggtcgtgcagctgcagacccggggaggagctgatgttc------ s panTro5.chr3 200008387 63 + 202621043 agaggagctga---tgttctag-attgagggtcgtgcagctgcagacctggggaggagctgatgttc------ i panTro5.chr3 I 994 C 0 s gorGor5.CYUI01015759v1 838953 66 - 880730 ggaggagCTGATGTTGTTCACG-GTTGAGGGTCTTTCagctggagactcagggaggagcttatgttc------ i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120778131 63 + 123690457 gaatgagctga---tgttctgg-tttgggcgtcttgcagccgcagacccagggaggagctgatgttc------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 251305 62 + 180051392 -gctgagctga---tgttccaa-tttgagggccatgcagctggagacccggcggggagctgatattc------ i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 75783 63 - 100774 -ggggagccga---tgttccagttttaaggtctgtgcagctggagacccgaggggcagctgatgttc------ i macNem1.NW_012013899v1 C 0 I 2078 s calJac3.chr5 41955190 67 + 159171411 GGAGGAGCACA----GTTGAAG-TTTGAAGGTTGTG-AGCTGGAGATCCAGGGAGGAGCTGGTGCTGCTGTTG i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I a score=14173.000000 s hg38.chr3_KI270779v1_alt 15259 21 + 205312 tagatagagggtcatgcagct s panTro5.chr3 200008450 21 + 202621043 tagatagagggtcatgcagct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 839019 21 - 880730 tagttttagattgttgcagct i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120778194 21 + 123690457 cagtttaagggtcttgcagcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 251367 21 + 180051392 cagttggagggccgtgcagct i rheMac8.chr6 C 0 I 104 s calJac3.chr5 41955257 21 + 159171411 TAGTTTTAGGGTTGGGGAGCT i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I a score=49887.000000 s hg38.chr3_KI270779v1_alt 15280 100 + 205312 gaagactcggggaggagctgatgttgt------agtttgagggtcatgcagttgaggactttgggaggagCTGATGTTG----TTCGTGTTGAGGGTCTTTCAGCTGGGG s panTro5.chr3 200008471 100 + 202621043 gaagacttggggaggagCTGATGTTGT------AGTGTGAGGGTCATGCAGTTGAGGACTTTGGGAGGAGCTGATGTTG----TTCGTGTTGAGGGTCTTTCAGCTGGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 839040 100 - 880730 gaagacttggggaggagctgatcttct------agattgagggtcgtgcagctgaagactcagggaggagctgatgttg----ttcgcattgagggtctttcaggtggag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120778215 98 + 123690457 acacacccggggaggagctgatgttcc------ggtttcagggtcttgcaggcgcagacccggggaggagctgatgt------tccggttttagGGTCTTGCAGCTGCAG i nomLeu3.chr11 C 0 I 846 s calJac3.chr5 41955278 110 + 159171411 GGAGGCTTCGGGAGGAGCCAGTGCTGCCTCTCAAGTCTGAGAGttgttgagctggagacccagggaggagccggtgctgctgctgtaatttgaggatcatgaatctggag i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=56090.000000 s hg38.chr3_KI270779v1_alt 15380 99 + 205312 ACTCAGGGAGGAGCTGATAAtct------tgattaagggtcatggagctggagacccagacagga------gctgatgttctagttagtggatcttccagctacagagtca s panTro5.chr3 200008571 99 + 202621043 ACTCAGGGAGGAGCTGATAAtct------tgattaagggtcatggagctggagacccagacagga------gctgatgttctagttagtggatcttccagctgcagagtca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 839140 99 - 880730 actcagggaggagctgataatct------tgactgagggtcatggagctggagtcccggacagga------gctgatgttctagttagtggatcttccagctgcagaccca i gorGor5.CYUI01015759v1 C 0 I 425 s nomLeu3.chr11 120779159 99 + 123690457 ACCCGTGGAGGAGCTGATATTCC------GGTTTGAGGGTCTTGCATCTGCGGACCCGGGGAGGA------GCTGAAGTTCTGGTTTGAGGGTCTTGCAGCCGCAGACCCG i nomLeu3.chr11 I 846 C 0 s calJac3.chr5 41955388 111 + 159171411 acctggggaggagctagtgttgctgttgatgtttgagggtcaggaagctggagacccggggaggagccggtgctgctgttgtagtttgaggattgtggagctggagacccg i calJac3.chr5 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=66495.000000 s hg38.chr3_KI270779v1_alt 15479 113 + 205312 gagaggagctgat------gttctagattgagggtcatgcagctgaatactcggggaggagctgatgttgta------gtttgagggtcatgcagttgaggacttcgggaggagctgatgttgtt s panTro5.chr3 200008670 113 + 202621043 gagaggagctgat------gttctagattgagggtcatgcagctgaagactcggggaggagctgatgttgta------gtttgagggtcatgcagttgaggacttcaggaggagCTGATGTTGTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 839664 113 - 880730 gggaggagctgat------gttctagtttgagggtcgtgcagctgcagacccggggaggagctgatgttcta------gtttgagGGTCGTGCAGCTGCAGACCCGGGGAGGAGCTGATGTTGTT i gorGor5.CYUI01015759v1 I 425 C 0 s nomLeu3.chr11 120779258 112 + 123690457 GGGAGGAACTGAT------GTTCCGGATTGGGGGTCTTGCagccgcagacccggggaggagctgatgttccc------gtttcggagtattgcagctgcagacctggggaggagctgatgttct- i nomLeu3.chr11 C 0 C 0 s calJac3.chr5 41955499 124 + 159171411 gggaggagctggtgctgcagctgtagtttgaggtttgtggagctgtagacccggggaggagctggcactgtagttgatgtttgagggtcgaggagctg-gaatctggggaggagCCGGTGCTGCT i calJac3.chr5 C 0 I 6840 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=105199.000000 s hg38.chr3_KI270779v1_alt 15592 258 + 205312 cACGTTGAGGGTCTTTCagctggggactcagagaggagctgataatcttgattgagggtcatggagctggaaacctagacaggagttgatgttctagttagtggatcttccagctgcagacccagggaggagctgatgttctagtttgagggtcgtgcagctgaagacccggggaggagctgatgttctagattgagggtcgtggagctgcagacgcggagaggagctgatgttctagtttgagggtcgtgcagctgg s panTro5.chr3 200008783 258 + 202621043 CACGTTGAGGGTCTTTCagctggggactcagagaggagctgataatctcgattgagggtcatggagctggagacctagacaggagttgatgttctagttagtggatcttccagctgcagacccagggaggagctgatgttctagtttgagggtcgtgcagctgaagacccggggaggagctgatgttctagattgagggtcgtggagctgcagacccggagaggagctgatattctagtttgagggtcgtgcagctgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 839777 258 - 880730 CGCGTTGAGGGTCTTTCagttggagactcagagaggagctgatgttctagatttagggtcacggaactggagacctggacagaagttgatattctagtttgagtgtctagcagctgcagatccggagaggagctgatgttctagattgagGGTCCTGCAGCTGGAGACTCGGGGTGGAGCTGATGTtctagattgagggtcgtgcagctgcagacctggagaggagctgatgttctagattgagggtcctgcagctgg i gorGor5.CYUI01015759v1 C 0 I 237 s nomLeu3.chr11 120779370 250 + 123690457 -gctttgagggtctcgcagctgcagac-cagggaggagctgatattcgggtttgagggtc------ttacagacccgtgaaggagctgatgttccagttGGACGGTCCTGCAGCCATGGACCTGGGGAGGAGCTGATGTTCCGGTTTCAGGGTCTTGCagctgcggacccggggaggagctgatgttcttgtttgagggtcttgaagccgcggacccggggaggagctgatgttccggtttgagggtcttgcagccac i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e calJac3.chr5 41955623 6840 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=206724.000000 s hg38.chr3_KI270779v1_alt 15850 535 + 205312 agacctggagaggagctgatgttctagtttgaggttcttgcagctgcagacctggagaggagctgatgttctagattgagggtcgtgcagctgcacacttggagaggagctg-----------------------------------------------atgttctagattgagggtcttgcagctgcagacctggagaggagctgatgttctag-tttgaggatc-----------------------------------------------ttgcagctgcagacccggagaggagctgatgttctactttgagggtcgtgcagctggagacctggagaggagctgatgttctagtttgagggtcatgcaggtgaagactcggggaggagctgatgttctagtttgaaggtcttgcagctgcagacctggagaggagctgatgttctagtttgaaggtcttgcagctgcagacctggagaggagctgatgttctagattgagggtcgtgcagctgaagactcggggaggagctgatgttctagattaagggtcatgcagctgaagactcagggaggagctgaggttctagtttgagggtcgtgcagctgaagactt------------------------------------------------gggaggagctga s panTro5.chr3 200009041 582 + 202621043 aggcctggagaggagctgatgttctagtttgaggttcttgcagctgcagacctggagaggagctgatgttctagattgagGGTCGTGCAGCTGCACACTTGGAGAGGAGCTG-----------------------------------------------ATGTtctagattgatggtcttgcagctgcagacctggagaggagctgatgttctag-attgagggtcgtgcagctgcacacttggagaggagctgatgttctagattgatggtcttgcagctgcagacctggagaggagccgatgttctactttgagggtcgtgcagctggagacctggagaggagctgatgttctagtttgagggtcatgcaggtgaagactcggggaggagctgatgttctagtttgagggtcttgcagctgcagacctggagaggagctgatgttgtagtttgatggtcttgcagctgcaaacctggagaggagctgatgttctagattgagggtcgtgcagctgaagactcggggaggagctgatgttctagattaagggtcatgcagctgaagactcagggaggagctgacgttctagtttgagggtcgtgcagctgaagactc------------------------------------------------gggaggagctga i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 840272 536 - 880730 AGACCTGGAGAGGAGCTGATGTtctagatagagggtcgtgcagctgaagactcggggaggagctgaggttctaatttgggggtcatgcagctgaagaccagg-gaggagCTG-----------------------------------------------AGGTTCTAGATTGAGGGTCTTGCAGCTGCAGATCTGGAGAGGAGCTGATGTTCTAGTTTTGAGGGTC-----------------------------------------------TTGTagctgcagacccggagaggagctgatgttctagtttgagggtggtgcagctgcagacctggagaggagctgatgttctcgtttgaggatcttggagctgcagagccagagaggagctgatgttctactttgagggtcgtgcagctggagacctggagaggagctgatgttcttatttgagggtcatgcagctgcagacctggagaggaggtgatgttctagtttgagtatcttgcagctgcagacctgcggaggagctgatgttctagtttgagggtcttgcagctgctgacccggagaggagctgatgttctagtttgagGGTCTTGCAGCTGTAGACTT-----------------------------------------------GGGGAGGAGATGA i gorGor5.CYUI01015759v1 I 237 I 11 s nomLeu3.chr11 120779620 629 + 123690457 agacccttggaggagctgatgttccggtttgagGTTCTTGCAGCCGCGGACC-AGGGAGGAGCTGATGTTCCGGTTTCAGGGTCTTGCAGCCGCAGACCCGTGGAGGCGCGGATGTTCCTGTTTGAGGGTTTTGTAGCCACAGACCCGGTTAGGTGCCAATGTTCTACATTGAAGGTCGTGCagccgcagacctggagaggagccgatggtgtag-tttgaggatc-----------------------------------------------ttgcagccaaagaccctgagaggcgccggtgtttcagtttgaggttcgtgcagccgaaaacccggggaggagccaatgttccagtttgagggtagtgcagccgcagaccccgggaagagcagatattccagtttgagggtcgtgcagctgcattccaggggaggagctgatgttccagtttgagggtcgtgtacccgcagatccagggaagagctgatgttccagtttgagggtcgtgcaaacgcagaccaggggaggaggtgatgttccagtttgagggtcctgcagccgcagacccagggaggcgctgattttccaatttgagGGTCGTGCAGCCGCAGACCTCCGTGGGAGCTGATGTTCCGGTTTGAGGGTCTTGCATCCGCAGACCAGCGGAGGAGCTGG i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e calJac3.chr5 41955623 6840 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=1622.000000 s hg38.chr3_KI270779v1_alt 16385 9 + 205312 gattctagt s panTro5.chr3 200009623 9 + 202621043 gattctagt i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120780249 9 + 123690457 TGTTCCAGT i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e calJac3.chr5 41955623 6840 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I e gorGor5.CYUI01015759v1 840808 11 - 880730 I a score=109929.000000 s hg38.chr3_KI270779v1_alt 16394 354 + 205312 ttgagggtcgtgcagcagaagactcagggaggagctgatgttctagattgagggccctacagctgcagacctgaagaggtgctgatgttcgagattgagggtcgtgcagctgaatactcggagaggagctgatgttatagtttgagggccctacagctgaagacccggagagtatctgatcttcgagattgagggtcatgcagctgaagactccgggaggagctgagttgctaatttgagggtcttgcagctgctgacttggggaggagctgatgttctagtttgagggccctacagttggaaatctgtacaggagctgatgttctagtttgagggtcatgcaggtgaaaaatc s panTro5.chr3 200009632 307 + 202621043 ttgagggtcgtgcagcagaagactcagggaggagctgatgttctagattgagggccctacagctgcagacctgaagaggagctgatgttcgagattgagggtcgtgcagctgaatactcagagaggagctgatgttatagtttgagGGCCCTACAGCTGAAGACCCCGAGAGTATCTGATCTtcgagattgagggtcgtgcagctgaagactccgggaggagctgaggtggtaatttgagggtcttgcagctgctgacttggggaggagctgatgttctagtttgaggg-----------------------------------------------tcatgcaggtgaagaatc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 840819 307 - 880730 TTGAGGGTCTTTCagttggagactcagggaggagctgatgttctagatttagggtcacggaactggagacctg-----------------------------------------------gagagaagatgatgttctagtttgaaggtcttgcagctgcagacctggagaggagctgatgttctagattgaggatcatgcaggtgaagactcagggaggagctgatgttctagattgagggtcttgcagctgcagacctggagaggagctgatgttctagtttgagggTCTTGCAGCTGTAGACCTGGAGAGGAGCTGATGTTCTAGATTGAGGGTCGTGCagccgaagactc i gorGor5.CYUI01015759v1 I 11 C 0 s nomLeu3.chr11 120780258 351 + 123690457 TTGAGGGTCGTGCAGCCGCAGGCCCGGCGAGGAGCTGATCTGCT---TTGAGGGTCGTGCAGCCGCAGACCCGGGGAGGAGCTGATGTTCTGGTTTGAGGGTGGTGCAATCACGGACCCGGGGAGGAGCTGATGTTCCGGTTTGAAGGTCTTGCAGCCGCGGACCCGAGGAGGTGCTGATTTTCCGGTTTGAGGGTCTTGCAGCCGCGGACCTGGGGAGGAGCTGATGTTCCAGTTTGAGGGTCTTGCagccgcggacccggggaggagctgatgttccggtttgagggtcttgcagctgcggacccggggaggagctgatgttccggtttgacggtcttgcagccgcaaaccc i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e calJac3.chr5 41955623 6840 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=8149.000000 s hg38.chr3_KI270779v1_alt 16748 35 + 205312 ggggaggagctgatattctagtttgagggccctgc s panTro5.chr3 200009939 35 + 202621043 ggggaggagctgatattctagtttgagGGCCCtgc i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120780609 35 + 123690457 agggaggagctgatggtccagtttgagGGTCTTGT i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e calJac3.chr5 41955623 6840 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I e gorGor5.CYUI01015759v1 841126 0 - 880730 C a score=39124.000000 s hg38.chr3_KI270779v1_alt 16783 154 + 205312 ag-------ctagaga---------------------------tgcagac------------aggagctga------tgttgtagtttgagggtcgtacagctgaagattcagggaggagc--tgctcgtgtatttttagggtcatgcagctgcagacccggagaggagc--tgatgttaaagattgagggtcatgcagctgaagactct s panTro5.chr3 200009974 154 + 202621043 ag-------cgagaga---------------------------tgcagac------------aggagctga------tgttgtagtttgagggtcatacagctgaagattcagggaggagC--TGCTCGTGTATTTTTAGGGTCATGCAGCTGCAGACCCGGAGAGGAGC--TGATGTTAAAGATTGAGGGTCATGCagctgaagactct i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120780644 200 + 123690457 AGCCGTGGACTAGGGAGGAGCTGATGTTCTGGTTTCAGGGTCTTGCAGCCGCAGAGCCGTGGAGGCGCGGA------TGTTCTTGTTTGAGGGTTTTGCAGCCGCAGACCCGGGGAGGTGC--CAGTGTTCTACATTGAGGGTCGTGCagccgcagacctggagaggagc--cgatgttgtagtttgaggatcttgcagccaaagaccct i nomLeu3.chr11 C 0 C 0 s calJac3.chr5 41962463 164 + 159171411 -------aactggagg---------------------------tccaggg------------aggagctggtgctgctgttgcagtctgagggtcgagcagctggagacccagggaggagcggtgttgctctagtttgaggttcctggagcaggagactaacagaggagtggtattgttttagtttgaaggtctaggagctggagaccca i calJac3.chr5 I 6840 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I e gorGor5.CYUI01015759v1 841126 0 - 880730 C a score=201003.000000 s hg38.chr3_KI270779v1_alt 16937 402 + 205312 gggaggagc--tgacgttctaatttgaggtccctacaggtggacaccgagagaggagctta---------tgttctagattgagggtcatgcagcagaagactcggggaagagctgaggttgt---------agtttgagggtcgtgcagct-----------------------------------------------ggagaaccagacaggagctga----tgttgtagattgagcgtcgtgcagctgaagactcagggaggagctgatgttg----ttcgttttgagggtgtttcagctggagactcaggga-----ggagctgacgttctaga-----------------------------------------------ttgagggtcttgcagctgcagacctgtagaggaactgatgt--------tctagattgagggtcacgcagctgaagacttggggagaagctgatgttctaact------tgagggtcgtgcagctgaggactcgggga-ggagCTGAT----GTTGACAGCTG s panTro5.chr3 200010128 402 + 202621043 gggaggagc--tgacgttctaatttgaggtccctacaggtggacaccgagagaggagctta---------tgttctagattgagggtcatgcagcagaagactcggggaagagctgaggttgt---------agtttgagggtcgtgcagct-----------------------------------------------ggagaaccagacaggagctga----tgttctagattgagcgtcgtgcagctgaagactcggggaggagctgatgttg----ttcgttttgagggtgtttcagctggagactcaggga-----ggagctgacgttctaga-----------------------------------------------ttgagggtcttgcagctgcagacccgtagaggaactgacgt--------tttagattgagggtcacgcagctgaagacttggggagaagctgatgttctaact------tgagggttgtgcagctgaggactcgggga-ggagCTGAT----GTTGACGGCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841126 450 - 880730 gggaggagc--tgaggttctagattaagggtcgtgcagctgaagacttggggaggagctga---------ggttctagtttgagggtcatgcagcagaagactcggggaagagctgaggttgt---------agtttgagggtcgtgcagct-----------------------------------------------ggagaatcagacaggagctga----tgttctagattgagcatcatgcagctgaagactcggggaggaactgatgttg----ttcgctttgagggtctttcagttggagactcaggga-----ggagctgatgttctagatttagggtcacggaactggagacctggagggaagctgatgtagtagtttgagggtcttgcagctgcagacccagagaggaactgatgt--------tctagattgagggtcacgcagctgaagacttggggagaagctgatgttgtaact------tgagggttgtgcagctgaggactcggggaggGAGCTGAT----GTTGACGGCTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120780844 451 + 123690457 gagaggcgc--cggtgtttcagtttgaggtccgtgcagctgaaaacgcggggaggagccaa---------tgttccagtttgagggtagtgcaggcgcagacccggggaagagcagatattcc---------agtttgagggtcgtgcagctgcattccaggggaggagctgatgttccagtttgagggtcgtgtacccgcagatccatggaagagctga----tgttccagtttgagggtcgtgcaaccgcagaccaggggaggagctgatgt------tccagtttgagggtcgtgtacccgcagatccgggaa-----agatctgatgttccagt-----------------------------------------------ttgagggtcgtgcagccacattcccggagaggagctgatga--------tccagtttgagggtcgtgcaaccgcagacacagggaagagctgatgttccagtt------tgagggtcgtgcagccgcaggCCCGGCGA-GGAGCTGATCTGCTTTGAGGGTCG i nomLeu3.chr11 C 0 C 0 s calJac3.chr5 41962627 445 + 159171411 aggaggagcagtgttgttctagtttggaggttgtccagcttgagatctagggaggagCTGGTGCTGCTGTTGTTTAAGGCCGAGGGtcgtggagctgatgatccaggaagaagcaagtgtttttgttgttcaagtctgagggttgtggagct-----------------------------------------------ggagacccagggaggaactgatttttattctagtttgagggttttggaactggagccccagggagtagCCAGTGCTGCCACTGATGTCTTAGAGttgtggagctgaagatccaggaggagctggtgctgatgttctagt-----------------------------------------------ttaaggattgtgcagctgcagacccggacaggagccgttgctactgctgtcaaatctgagggtcatagagctggagccttgcagagaagccggtgcttcatctcaagtctgaGAGTTGTTAAGCTGGAGATTTAGGGA-GGTGCCGGT--------GCAGCTG i calJac3.chr5 C 0 I 191 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=22735.000000 s hg38.chr3_KI270779v1_alt 17339 45 + 205312 TGCAGCTGGAGATCCGGCGGGGAGCTGATGTTCCGGTTTGAGGGC s panTro5.chr3 200010530 45 + 202621043 TGCAGCTGGAGATCCGGCGGGGAGCTGATGTTCCAGTTTGAGGGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841576 45 - 880730 TGCAGCTGGAGATCCGGCGGGGAGCTGATGTTCCAGTTTGAGGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120781295 45 + 123690457 TGCAGCCGCAGACCCGGGGAGGAGCTGATGTTCCGGTTTGAGGGT i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 75846 2078 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16196495 547 + 16742782 I e rheMac8.chr6 251388 104 + 180051392 I a score=2100.000000 s hg38.chr3_KI270779v1_alt 17384 1 + 205312 C s panTro5.chr3 200010575 1 + 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841621 1 - 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120781340 1 + 123690457 C i nomLeu3.chr11 C 0 I 1841 s rheMac8.chr6 251492 1 + 180051392 C i rheMac8.chr6 I 104 C 0 s macNem1.NW_012013899v1 77924 1 - 100774 C i macNem1.NW_012013899v1 I 2078 C 0 s cerAty1.NW_012009470v1 16197042 1 + 16742782 C i cerAty1.NW_012009470v1 I 547 C 0 e panPan2.chr3 492201 10571 - 205426864 M e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I a score=16978.000000 s hg38.chr3_KI270779v1_alt 17385 10 + 205312 GGGGAGCTGA s panTro5.chr3 200010576 10 + 202621043 GGGGAGCTGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841622 10 - 880730 GGGGAGCTGA i gorGor5.CYUI01015759v1 C 0 I 125 s nomLeu3.chr11 120783182 10 + 123690457 GAGGAGCTGA i nomLeu3.chr11 I 1841 C 0 s rheMac8.chr6 251493 10 + 180051392 GGGGAACTGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 77925 10 - 100774 GGGGAGCTCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16197043 10 + 16742782 GGGGAACTGA i cerAty1.NW_012009470v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I a score=63051.000000 s hg38.chr3_KI270779v1_alt 17395 42 + 205312 TGTTCCAGTTTGATGGCCGTGCACCTGGAGACCCAGGGAGGA s panTro5.chr3 200010586 42 + 202621043 TGTTCCAGTTTGATGGCCGTGCACCTGGAGACCCAGGGAGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841757 42 - 880730 TGTTCCAGTTTGATGGCCGTGCACCTGGAGACCCAGGGAGGA i gorGor5.CYUI01015759v1 I 125 C 0 s nomLeu3.chr11 120783192 42 + 123690457 TGTTCCGGTTTGACGGTCTTGCAGCCGCAAACCCAGGGAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 251503 42 + 180051392 TGTTCCAGTATGAGGGCCCTGCACCTGGAGACCTGGGGGGGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 77935 42 - 100774 TGTTCCAATTTGAGGGTCGTACAGCTGGAGAACTAGGGAGGA i macNem1.NW_012013899v1 C 0 I 185 s cerAty1.NW_012009470v1 16197053 42 + 16742782 TGTTCCAGTATGAGGGCCCTGCACCTGGAGACCTGGGGGGGA i cerAty1.NW_012009470v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I a score=2255.000000 s hg38.chr3_KI270779v1_alt 17437 2 + 205312 AC s panTro5.chr3 200010628 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841799 2 - 880730 AC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120783234 2 + 123690457 GC i nomLeu3.chr11 C 0 I 368 s rheMac8.chr6 251545 2 + 180051392 AC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16197095 2 + 16742782 AC i cerAty1.NW_012009470v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I a score=92170.000000 s hg38.chr3_KI270779v1_alt 17439 145 + 205312 Atcaaactggaacatctgctccccgcagtgcctccagctgcatggctcccaaactggaacatcggttcccacccgggtctccagctgcacggccctcaaactgcaacatcggctatcc-ccgagtctccagctgcacggccctcaa s panTro5.chr3 200010630 145 + 202621043 ATCAAACTGGAACATCTGCTCCCCGCAGTGCCTCCAGCTGCATGGCTcccaaactggaacatcagttcccacccgggtctccagctgcacagccctcaaactgcaacatcggctaccc-ccgagtctccagctgcacggccctcaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841801 144 - 880730 ATCAAACTGGAACATCTGCTCCCCGCAGTGCCTCCAGctgcatggctcccaaactggaacatcggttcccacccgggcctccagctgcacggccctcaaactgcaacatcggcta-cc-ccgagtctccagctgcacagccctcaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 251547 130 + 180051392 ATCAAACTGGAACATCAGCTCCCCGCCTGGGctccagctgcatggccctgaaactggaacatcagctccctgcggggtctccag----------------ctggaaggttgtctccccgcctggtctccagctgcacggttctcaa i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16197097 130 + 16742782 ATCAAACTGGAACATCAGCTCCCCTCCTGGTctccagctgcacggccctcaaactggaacatcagctccctgtagggtctccag----------------ctggaacattggctccccgcctggtctccagctgcacggttctcaa i cerAty1.NW_012009470v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e nomLeu3.chr11 120783236 368 + 123690457 I a score=4597.000000 s hg38.chr3_KI270779v1_alt 17584 9 + 205312 actggaaca s gorGor5.CYUI01015759v1 841945 9 - 880730 actggaaca i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 251677 9 + 180051392 actagaaca i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012009470v1 16197227 9 + 16742782 actagaaca i cerAty1.NW_012009470v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e nomLeu3.chr11 120783236 368 + 123690457 I e panTro5.chr3 200010775 0 + 202621043 C a score=1719.000000 s hg38.chr3_KI270779v1_alt 17593 6 + 205312 tcagct s rheMac8.chr6 251686 6 + 180051392 tcagct i rheMac8.chr6 C 0 I 13 s cerAty1.NW_012009470v1 16197236 6 + 16742782 tcagct i cerAty1.NW_012009470v1 C 0 I 13 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e nomLeu3.chr11 120783236 368 + 123690457 I e gorGor5.CYUI01015759v1 841954 0 - 880730 C e panTro5.chr3 200010775 0 + 202621043 C a score=0.000000 s hg38.chr3_KI270779v1_alt 17599 13 + 205312 tctccccaagtct e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197242 13 + 16742782 I e rheMac8.chr6 251692 13 + 180051392 I e nomLeu3.chr11 120783236 368 + 123690457 I e gorGor5.CYUI01015759v1 841954 0 - 880730 C e panTro5.chr3 200010775 0 + 202621043 C a score=27583.000000 s hg38.chr3_KI270779v1_alt 17612 123 + 205312 ttcagctgaatggccctcaaactggaacttcagctccccaccgggtatccagctgcatggccctcaaactggaagttcagctccccaccgggtctccagctgcacggccctcagactggaaca s rheMac8.chr6 251705 122 + 180051392 tccagctgcacggccctcaaactgcaacatcagctaccc-ccgggtctccagctgcatggcgctcaaactggaatgtcagctgcctgccgggtctccagctgcacggacctcaaactggaacA i rheMac8.chr6 I 13 I 9154 s cerAty1.NW_012009470v1 16197255 122 + 16742782 tccagctgcacggccctcaaactgcaacatcagctaccc-ccaggtctccagctgcatggcgctcaaactggaacgtcaccTGCCTGCCCGGTCTCCAGCTGCACGGACCTCAAACTGGAACA i cerAty1.NW_012009470v1 I 13 I 297 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e nomLeu3.chr11 120783236 368 + 123690457 I e gorGor5.CYUI01015759v1 841954 0 - 880730 C e panTro5.chr3 200010775 0 + 202621043 C a score=0.000000 s hg38.chr3_KI270779v1_alt 17735 38 + 205312 tcagctccccactgggtctccagctgcacggccctcag e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I e nomLeu3.chr11 120783236 368 + 123690457 I e gorGor5.CYUI01015759v1 841954 0 - 880730 C e panTro5.chr3 200010775 0 + 202621043 C a score=5262.000000 s hg38.chr3_KI270779v1_alt 17773 56 + 205312 actggaacatcagctccccaccgggtctccagcttcacggccctcaaactggaact s panTro5.chr3 200010775 56 + 202621043 actggaacatcagctccccactgggtctccagcttcacggccctcaaactggaact i panTro5.chr3 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I e nomLeu3.chr11 120783236 368 + 123690457 I e gorGor5.CYUI01015759v1 841954 0 - 880730 C a score=50096.000000 s hg38.chr3_KI270779v1_alt 17829 201 + 205312 tcagctccccaacgggtctccagcttcacggccctcaaactggaacttcagctccccaccgggtatccagctgcatggccctcaaaccggaagttcggctcccccgcgggtctccagctgcacggccctcagactggaacatcagctccccgccgggtctccagctgcacggccctcaaactggaaTAGTTTGAACTCAGC s panTro5.chr3 200010831 201 + 202621043 tcagctccccaccgggtatccagctgcatggccctcaaactggaacttcagctccccaccgggtatccagctgcatggccctcagactggaacatcagctccctgccgggtctccagctgcacggccctcagactggaacatcagctccccactgggtctccagctgcacggccctcaaactggaaTAGTTTGAACTCAGC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 841954 200 - 880730 tcagctccccaccgggtctccagcttcacagccctcaaactggaacatcagctccccaccgggtatccagctgcatggccctcaaactggaacttcaactccccaccaggtctccagctgcacggccctcagactggaaaatcagctccctgccgggtctccagctGCACGG-CCTCAAACTGGAATAGTTTGAACCCAGC i gorGor5.CYUI01015759v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I e nomLeu3.chr11 120783236 368 + 123690457 I a score=1407.000000 s hg38.chr3_KI270779v1_alt 18030 3 + 205312 GGG s panTro5.chr3 200011032 3 + 202621043 GGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 842154 3 - 880730 GGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120783604 3 + 123690457 gag i nomLeu3.chr11 I 368 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841224 185 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=220622.000000 s hg38.chr3_KI270779v1_alt 18033 333 + 205312 GAGCTGATGTTCCAGTTTGAGGGCTGTGCagctggagacccggcagggagctgatgttccggttgt-agggctgtgcagccggagacccagggggaagctgatgttccagttgtagggccgtgctactggagacccaggggtggagctgatgttccagtttgagggccatgcagttgatgacccggcggggagctgatgttcaagtttgaggtctgtgcagctggagacccgcgggggagctgatgttccagtttgatggccatgcagctggaggctctgatgggagctgatgttgcaatttgagggccatgcagctggagacctggcggggag s panTro5.chr3 200011035 333 + 202621043 GAGCTGATGTTCCAGTTTGAGGGCCGTGCagctggagacccagcagggagcggatgttccggttgt-agggctgtgcagccggagacccggggggaagctgatgttccagttgtagggccgtgctgctggagacccaggggtggagctgatgttccagtttgagggccgtgcagttgatgacccggcggggagctgatattcaagtttgaggtctgtgcagctggagacccgcggggaagctgatgttccagtttgatggccatgcagctggagactctgatgggagctgatgttgcaatttgagggccatgcagctggagacctggcggggag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 842157 332 - 880730 GAGCTGATATTCCAGTTTGAGGGCGATGCAGCCGGAGACCCGGCAGGGAGCTGATGTTCCGGTTGT-AGGGCTGTGCagctggagacct-gggggaagctgatgttccagttgtagggctgtgctgctggagacccaggggtggagctgatgttccagtttgagggccatgcagttgatgacccggcggggagctgatgttcaagtttgaggtctgtgcagctggagacccgtgggggagctgatgttccagtttgatggccatgcagctggagactctgatgggagctgatgttgcaatttgagggccatgcagctggagacctggcggggag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120783607 332 + 123690457 gagctgatgttccagtttgagggtcgtgtacccgcagatccatggaagagctgatgttccagtttg-agGGTCGTGCAACCGCAGACCAGGGGAGGAGCTGATGTTCCGGTTTGGGGGTCTTGCAGCCACTGACCC-GGGGAGGAGCTTGTGTTCCGGTTTGGGGGTCTTGCAATCACGGACCCGGGGAGGAGCTGATGTTCCGGTTTGAGGGTGGTGCAATCACGGACCCGGGGAGGAGCTGATGTTCCGGTTTGAGGGTCTTGCAGCCGCGGACCTGGGGAGGAGCTGATGTTCCAGTTTGAGGGTCTTGCAGCCGTGGATCTGGGGAGGAG i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012116910v1 841409 328 + 1687011 GAGCTGATGTTCCAGTTTGAGGGCTGTGCCgctgtagatccgg-ggggagccgatgttccagttttaagggccgtgcagctggagaccctacggggagctaatgttccatttttagggccatgaagcaggatacct-ggcagggagctgatgttccagtttgagggccatgcagctggagacccggcggggagctgatgttccattttgagg-ctgtgccgctgtagatccgcgg-ggagccgatgttccagtttgagggccatgcagctggag--ccagggctgagctgatgttccagtttgagGGCCGTGCagctggagacctggcggggag i colAng1.NW_012116910v1 I 185 I 687 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=246.000000 s hg38.chr3_KI270779v1_alt 18366 2 + 205312 gt s panTro5.chr3 200011368 2 + 202621043 gt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 842489 2 - 880730 ct i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120783939 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 841737 687 + 1687011 I e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=54975.000000 s hg38.chr3_KI270779v1_alt 18368 131 + 205312 gatgttccagtttgagggccatgcagctggtgacctggcagggagctgatgttccagtttgaggaccgtgct-----------------------------------------------cctggagacctagcggggagctgatgttcca--------------------------------------------------------------------------------------------------------------gtttaaggccatgcagctgtatgcccgg- s panTro5.chr3 200011370 226 + 202621043 gatgttccagtttgagggccatgcagctggtgacctggcagggagctgatgttccagtttgaggaccgtgct-----------------------------------------------cctggagacctagcggggagctgatgttccaatttgagggccgtg--cagctggagacccggcggggaactgatgttccagtttgagggccgtgcatctggagacctgggcagggagctgatgtt-------------ccagtttaaggccatgcagctgtatacccgg- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 842491 226 - 880730 gatgttccaatttgagggccatgcacctggagacctggcggggagctgatgttccagtttgaggcccgtgctcctggagacctggcggtgaactgatgttccagtttgagggccatgcacctggagacctggcggggagctgatgttccaatttgagggccatgcac--ctggagacctggcggggagctgatgttccag------------------------------------------------------------tttgagggccgtgcagctggagacccgg- i gorGor5.CYUI01015759v1 C 0 I 234 s nomLeu3.chr11 120783941 178 + 123690457 GATGTTCCGGTTTGACGGTCTTGCAGCTGCGGACCCGGGGTGGAGCTGATGGTCCGGTTTGAGCGTCTTGTA-----------------------------------------------GCCGCGGACC-AGAGAGGAGCTGATGTTCTGGTTTCAGGGTCTTG--CAGCCGCAGACCCG------------------------------------------------------------TGGAGGCGCGGATGTTCCTGTTTGAGGGTTTTGCAGCCGCAGACCTGG- i nomLeu3.chr11 C 0 I 1 s colAng1.NW_012116910v1 842424 132 + 1687011 gatgttccagtttgagggctgtgcagctggagacccagcggggagctgatgttccagtttcagggccgtgca-----------------------------------------------gctgtagatctgg-ggggagctgatgttccag-------------------------------------------------------------------------------------------------------------tttgagggccgtgcagctggagactcatc i colAng1.NW_012116910v1 I 687 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=34788.000000 s hg38.chr3_KI270779v1_alt 18499 65 + 205312 ggggaactgatgttgcagtttgagGGCCGTGCATCGGGAGACCCGGTGGGGAGCCAGTGTTGCAG s panTro5.chr3 200011596 65 + 202621043 ggggaactgatgttgcagtttgagGGCCGTGCATCTGGAGACCCGGTGGGGAGCCAGTGTtgcag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 842951 65 - 880730 GGGGAGCTGATGTTCCTGTTTGAGAGCCGTGCagctggagaccctgtggggagctgatgttcctg i gorGor5.CYUI01015759v1 I 234 C 0 s nomLeu3.chr11 120784120 65 + 123690457 GAGGTGCCAATGTTCTACATTGAGGGTCGTGCAGCCGCACACCTGGAGAGGAGCCAATGTTGTAG i nomLeu3.chr11 I 1 C 0 s colAng1.NW_012116910v1 842556 65 + 1687011 agggagctgatgttccaattggagggccggggagctggacacacaggggtaagctaatgctccag i colAng1.NW_012116910v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89551932 13243 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=24595.000000 s hg38.chr3_KI270779v1_alt 18564 25 + 205312 GTTGAGGGCCGTGCAGCTGGAGACC s panTro5.chr3 200011661 25 + 202621043 gttgagggccgtgcagctggagacc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 843016 25 - 880730 tttgagagccgtgcagctggagatc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120784185 25 + 123690457 TTTGAGGATCTTGCCGCCGCAGACC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 89565175 25 - 91010382 GTTGAGGGCCCTGCAGCTGGAGACC i chlSab2.chr4 I 13243 C 0 s colAng1.NW_012116910v1 842621 25 + 1687011 tttgagggcagtgctgctgtagacc i colAng1.NW_012116910v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963072 191 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=1314.000000 s hg38.chr3_KI270779v1_alt 18589 1 + 205312 C s panTro5.chr3 200011686 1 + 202621043 c i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 843041 1 - 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120784210 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 89565200 1 - 91010382 C i chlSab2.chr4 C 0 I 881 s colAng1.NW_012116910v1 842646 1 + 1687011 c i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41963263 1 + 159171411 C i calJac3.chr5 I 191 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=258160.000000 s hg38.chr3_KI270779v1_alt 18590 324 + 205312 TGTGGGGAGC-----------------------------------------------TGATGTTCTTGTTTGAGAGCCGTGCagctggagaccctgtggggagctgatgtt------cctgtttgagagctgtgcagctggagatctggtggggagctga------tgttccagtatgagggccgtgcggctggagacctggtggggagctga------tgttccagtttgagggccgtgcacctggagacccggcagggagctga------tgttccagtttgagggctgtgcagctggatacc-gggggtggagctgatgttcc------agtttgagggccatgcatctggagacccagttggtagccagtgttgc------aggttgagGGCTGTGGAGTTGGA s panTro5.chr3 200011687 324 + 202621043 tgtggggagc-----------------------------------------------tgatgttcctgtttgagagccgtgcagctggagacctggtggggagctgatgtt------ccagtatgagggccgtgcagctggagacctggtggggagctga------tgttccagtttgagggccgtgcacctggagacccggcagggagctga------tgttccagtttgagggccgtgcacctggagacccggcagggagctga------tgttccagtttgagggctgtgcagctggatacc-gggggttgagctgatgttcc------agtttgagggccatgcatctggagacccagtgggtagccagtgttgc------aggttgagGGCTGTGGAGCTGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 843042 324 - 880730 ggtggggagc-----------------------------------------------tgatgttccagtatgagggccgtgcagctggagatctggtggggagctgatgtt------ccagtttgagggccgtgcacctggagacccggcagggagctga------tgttccattttgagggccgtgcacctggagacccggcggggagctga------tgttccagtttgagggccgtgcagctggatacccggcagggagctga------tgttccagtttgagGGCCGTGCAGCTGGATACCGGGGGGTGGAGCTGATGTTGC------AGTTTGAGGGCCGTGCATCTGGAGA-CCAGTGGGTAGCCAGTGTTGC------AGGTTGAGGGCTGTGGAGCTGGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120784211 371 + 123690457 TGAGAGGCGCCAGTGTTCCAGTTTGAGGTTCATGCAGCCGAAATCCCCGGGTGGAAGCGATgttccattttgagggtcgtgcagccgcagacccggggaagagctgatgtt------ccagtttcaggatcgtgtagctgcagacctggggaagagctga------tgttccagtttcagggtcgttcagccacagaccaggggaggagctga------tgttccagtctgagggccgtgcagcggcagactcggggaggcgctga------tgttccaatttcagGGTCGTGCagccgcagacc-cggggaggtgctgatgttcc------ggtttgagggtcttgcagccacggacccggggaggagctgatgttcc------ggtttgagggtcttgcagccacg i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012116910v1 842647 324 + 1687011 agtggggagc-----------------------------------------------tgatgttccagtttgagggccgtgctgctggagacccagcagggagctgctgtt------ccagtttaagggccatgcaggtggacacaaggcagagagctga------tgttccagtttgagagccatgcagctggagaccgggtggggagctgt------tgttccagtttgagagccgtgtagctggagaccctacagggagctga------tgttccagtttgagggccgtgcagctggagacc-aggcggggagctgatgttcc------agtttgagcaccatgcagccggacacccggcggggagctgatgttcc------agtttgtgggccgtgcagccgga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41963264 360 + 159171411 AGGGAGTAGCTGGTGC-----------------------------------------TGCTGTTCAAATTTGAGGGTCAG------GGAGACCTGGGGAGGAGCCAGTGATGCCTGCCACGTCTGAGAGTCACTGAGCTGGAGATGCAGGGAGGAGCTGGTGCCGCTGTTGTAGTTTGAGGATTGTGAATCTGGAGACCCGGGGAGGAGCTGGTGCCGCTGTTGtagtttgaggattgtgaatctggagacccggggaggagctggtgccgctgttgtagtttgaggattgtgaatctggagatc-cagggaggagctggtgctgctgttgtagtttgagggtcatggaggtgaagatccagggaggagccggtgctgctgtttaagtctgaggatcgtggagctAAA i calJac3.chr5 C 0 T 7606 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=110709.000000 s hg38.chr3_KI270779v1_alt 18914 183 + 205312 GACCCGGGTTGGGGGGAGCTGATGTTCCAGGTTGAGGGCCATGCTgctggagacccagcggggagctgatgttgcagtttga-gGCGGTGCAGCTGGACATGCAGGGGGGAAGTGATGTTGCAATTTGAGGGCTGTGCagctggagaccctgtggggagctgatgttcctgtttgagggtctcg s panTro5.chr3 200012011 183 + 202621043 GACCCGGGTTGGGGGGAGCTGATGTTCCAGGTTGAGGGCCGTGCTgctggagacccagcggggagctgatgttgcagtttga-ggcggtgcagctggacacgcaggggggaagtgatgttgcaatttgagggctgtgcagctggagaccctgtggggagctgatgttcctgtttgagggtctcg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 843366 183 - 880730 GACCCGGGTTAGGGGGAGCGGATGTTCCAGGTTGAGGGCCGTGCTgctggagacccagcggggagctgatgttgcagtttga-ggcggtgcagctggagacccagcggggaactgatgttgcaatttgagggctgtgcagctggagaccctgtggggagctgatgttcctgtttgagggcctgg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120784582 179 + 123690457 gacccgg----ggaggagctgatgttccagtttgagggtcttgcagccgcaaacccagggaggagctgatgttccagtttgagggtcttgcagccgtggac-cagggaggagctgatgttccagtttcagggTCTTGCAGCCGCAGACCTGTGGAGGCGCGGATGTTCCTGTTTGAGGGTTTTG i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012116910v1 842971 176 + 1687011 cacatgg---caaaagagatgatgttctagtttgagaaccgtgcagctggagatcaggaggggagctgatgttccagtttaagggccatgcagctggagaccgggcggggagccaatgttccagtttgagggccgtgcagctggagactcaggggggagccgacgttccagtttgaggg----- i colAng1.NW_012116910v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e cerAty1.NW_012009470v1 16197377 297 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=330868.000000 s hg38.chr3_KI270779v1_alt 19097 386 + 205312 gagctg-------------------atgttcca-gtttaagg-ccatgcagctggagacccggtggggagctgatgttccagtttgagggccatgcatctggagacccggt-ggggagctgatgttgcaggttgagggccattcatctggagacccagtggggagctgatgttgcaggttgagggctgtgcacctggagccccggggtggagctgatattccagtttgagggccgtgcagctggcaatctggtggggagctgatgttccagtttgagggccatgcagctggagaccg----gg-----------------------cagggagctcatgttccagtttgcaggcagtgcagctggagacccggcggggagctgatgttccagtttgaggtccgtgcagctggagatctggtggggagctgatgtt s panTro5.chr3 200012194 386 + 202621043 gagctg-------------------atgttcca-gtttaagg-ccatgcagctggagacccggtggggagccgatgttccagtttgagggccatgcatctggagacccggt-ggggagctgatgttgcagtttgagggccgttcatgtggagacccagtggggagctgatgttgcaggttgagGGCTGTGCACCTGGAGCCCCGGGGTGGAGCTTATATTCCAGTTTGAGGGCCGTGCagctggcgatctggtggggagctgatgttccagtttgagggccatgcagctggagacct----gg-----------------------cagggagctcatgttccagtttgcaggcagtgcagctggagacctggcggggagctgatgttccagtttgangtccgtgcagctggagatctggtgggnagctgatgtt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 843549 386 - 880730 gagctg-------------------atgttcca-gtttaagg-ccaTGCAGCTGGATACCCGGTGGGGAGCCGATATTCCAGTTTGAGGGCCAAGCATCTGGAGACCCGGT-GGGGAGCTGATGTTGCAGGTTGAGGGCTGTGCATCTGGAGACCCGGTGGGGAGCTGATGTTGCAGGTTGAGGGCTGTGCACCTGGAGCCCCGGGGTGGAGCTGATATTCCAGTTTGAGGGCCGTGCGGCCGGCGATCTGGTGGGGAGCTGATGTTCCAGTTTGAGGGCCATGCAGCTGGAGACCC----GG-----------------------TAGGGAGCTCATGTTCCAGTTTGCAGGCAGTGCagctggagacccggcggggagctgatgttccagtttgaggtccatgcagctggagatctggtggggagctgatgtt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120784761 406 + 123690457 Tagctgcagacccagagaagtgccaatgttctacattgaggg-tcgtgcagccgcagaactggagaggagctgatgttgtagtttgaggatcttgcagccgcagaccctga-gaggagccggtgtttcagtttgaggttcgtgcagccgaaaacccggggagaagccgatgttccagtttgagggtagtgcagccgcagacccggggaagagcagatattccagtttgagggtcgtgcagccgcattccaggggaggagctgatgttccagtttgagggtcgtgcagccacagaccc----gg-----------------------gtaagagctgatgttccggtttgagGGTGGTGCAGCCATGGACCCGAGGAGGAGCTTCTGTTCTGGTTTCTGGGTCTTGCAGCCACGGATCCAGGGAGGAGCTCATGTT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012009470v1 16197674 415 + 16742782 gagctg-------------------atgttcca-gtttgagcaccatgcagctggagactcagcggggagctgatgttgcagtttgaggtccgtgcagctggacacatggcaagagagctgatgttccagtttgagaaccgtgcagctggagaccaggaggggagctgatgttccagtttgagGGCTGTGCagctggagaaccgtgggggagttgatgttccagtttgagggccgtgcaactggagattcagggtggcgccgatgttccactttgagggcgatgcagctggagaccctgtgggagctgatgttccagtttcagggcccagaagctgatgttccagtttaagggccatgcagctggagACACGGCGGGGAGCTCATGTTCCAGTTTGAGGGTCGTGCAGCTGGAGAACTAGGGAGGAGCTGATGTT i cerAty1.NW_012009470v1 I 297 I 99 s colAng1.NW_012116910v1 843147 344 + 1687011 -------------------------------------------ccgtgcagctggagaccctacagggagcttatgttccagtttgagggccgtgcagctggagaccctac-agggagcttatgttccagtttgagggccgtgcagctggagaaccggtggggagctgatgttccagtttgagggccgtgcaactggagattcagggtggcgccgatgttccagtttgagggcgatgcagctggagacccggtg-----------------------------------------------ggagctgatgttccagtttgagggcctggaagctgatgttccagtttaagggccatgcagctggagacacggcagggagctcatgttccaatttgagggtcgtgcagctggagaactagggaggagctgatgtt i colAng1.NW_012116910v1 C 0 I 4 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e rheMac8.chr6 251827 9154 + 180051392 I a score=55477.000000 s hg38.chr3_KI270779v1_alt 19483 92 + 205312 ccagtttgagggccctgcagctggagacccgtgg-ggatctgatgttccagtttgagggtggtgctgctggcgacccaggcgggagctgatgt s panTro5.chr3 200012580 92 + 202621043 ccagtttgagggccctgcagctggagacccgtgg-ggatctgatgttccagtttgagggtggtgctgctggcgacccaggcgggagctgatgt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 843935 92 - 880730 ccagtttgagggccctgcagctggagacccttgg-ggatctgatgttccagtttgagGGTGGTGCTgctggtgacccaggcaggagctgatgt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785167 93 + 123690457 CTGGTTTGAGGATGATGCAGCCGCTGACCGGTGGAGGAGCTGATATTCCGGTTTGAGGGTCTTGCATCTGCGgacccagggaggagctgaagt i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012116910v1 843495 92 + 1687011 -tcatttgagagccgtggagctggagacctggagaggaactggtgttctagtttgacggttgtggagctggggatacagggaggagctgttgt i colAng1.NW_012116910v1 I 4 I 3 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e cerAty1.NW_012009470v1 16198089 99 + 16742782 I e rheMac8.chr6 251827 9154 + 180051392 I a score=72564.000000 s hg38.chr3_KI270779v1_alt 19575 80 + 205312 tctagttttagggccctacagctggagacccggggaggagctgacattccctttcgagggctgtgcaggtggagacctgg s panTro5.chr3 200012672 80 + 202621043 tctagttttagggccctacagctggagacccggggaggagctgacgttcccgttcgagggctgtgcaggtggagacctgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844027 80 - 880730 tctagttttagggccctgcagctggagacccggggaggagCTGACGTTCCCGTTCGAGGGCTGTGCAGGTGGAGACCTGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785260 80 + 123690457 tccagtttgagtgtcttgcagccgcagacccagggaggagctgatgttccggattgGGGGTCTTGCAGCCGCAGATCCGG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012009470v1 16198188 77 + 16742782 tatagtttgagggccgtggagctgaagaccctgggaggagctg---ttctagtttgagggtcgtgcagctggacacccta i cerAty1.NW_012009470v1 I 99 C 0 s colAng1.NW_012116910v1 843590 77 + 1687011 tatagtttgagggccgtggagctgaagaccctgggaggagctg---ttctagtttgagggtcgtgcagctggacacccta i colAng1.NW_012116910v1 I 3 C 0 e panPan2.chr3 492201 10571 - 205426864 M e macNem1.NW_012013899v1 77977 185 - 100774 I e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e rheMac8.chr6 251827 9154 + 180051392 I a score=99220.000000 s hg38.chr3_KI270779v1_alt 19655 80 + 205312 ggaggaactgatgttgttctaatttgagtgtggtgcagctgGAGATCCAGGGATGAGATGGCCCTGCGGTTCAAATATGA s panTro5.chr3 200012752 80 + 202621043 ggaggaactgatgttgttctaatttgagtgtggtgcagctgGAGATCCAGGGATGAGATGGTCCTGCGGTTCAAATATGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844107 80 - 880730 GGAGGAGCTGATGTTGTTCTAATTTGAGTGTGGTGCAGCTGGAGATCCAGGGATGAGATGGCCCTGCCGTTCAAATATGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785340 71 + 123690457 GGAGGAGCTGA---TGTTCCCGTTTTGGAGTATTGCAGCCGCAGACCTTGGGAGGAG------CTGATGTTCTGCTTTGA i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 78162 80 - 100774 ggaggagctgatgttgttgcagtttgagtattgtgcagctggagatctagtggggaagaggtcctgtGATTCGAATCTAA i macNem1.NW_012013899v1 I 185 C 0 s cerAty1.NW_012009470v1 16198265 80 + 16742782 ggaggagctgatgttgttgcagtttgagtattgtgcagctggagatctagtggggaaaaggtcctgtGATTCGAATCTGA i cerAty1.NW_012009470v1 C 0 C 0 s colAng1.NW_012116910v1 843667 80 + 1687011 ggaggagctgatgttgttgcagtttgagtattgtgcagctggagatctagggggtaagtggtcctgtGGTTCAAATCTGA i colAng1.NW_012116910v1 C 0 C 0 e panPan2.chr3 492201 10571 - 205426864 M e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e rheMac8.chr6 251827 9154 + 180051392 I a score=60201.000000 s hg38.chr3_KI270779v1_alt 19735 36 + 205312 GGGTCCCGGAGCTGGACTCTACGTGAGGAACCAATG s panTro5.chr3 200012832 36 + 202621043 GGGTCCCGGAGCTGGACTCTACGTGAGGAACCAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 502772 36 - 205426864 GGGTCCCGTAGCTGGACTCTACGTGAGGAGCCAATG i panPan2.chr3 M 10571 C 0 s gorGor5.CYUI01015759v1 844187 36 - 880730 GGGTCCCGTAGCTGGACTCTACGTGAGGAACCAATG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785411 29 + 123690457 GGGTCTCGCagctgcagacca-gggaggag------ i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 78242 36 - 100774 GGGTCTCGGGGCTGGAATCTACGGGAAGAGCCAGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198345 36 + 16742782 GGGTCTCCGGGCTGGAATCTACGGGAAGAGCCAGTG i cerAty1.NW_012009470v1 C 0 C 0 s colAng1.NW_012116910v1 843747 36 + 1687011 GGGTCTCAGAGCTGGAATCTACGGGAGGAGCCAGTG i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89565201 881 - 91010382 I e rheMac8.chr6 251827 9154 + 180051392 I a score=50927.000000 s hg38.chr3_KI270779v1_alt 19771 22 + 205312 CTGCCTCTGATGTCTTAGGTTG s panTro5.chr3 200012868 22 + 202621043 CTGCCTCTGATGTCTTAGGTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 502808 22 - 205426864 CTGCCTCTGATGTCTTAGGTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844223 22 - 880730 CTGCCTCTGATGTCTTAGGTTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785440 16 + 123690457 ------ctgatattcaggtttg i nomLeu3.chr11 C 0 I 142 s macNem1.NW_012013899v1 78278 22 - 100774 CTGCCTCTCATGTCTTAGGCTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198381 22 + 16742782 CTGCCTCTCATGACTTAGGCTG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89566082 22 - 91010382 CTGCCACTGATGTCTTAGGTTT i chlSab2.chr4 I 881 C 0 s colAng1.NW_012116910v1 843783 22 + 1687011 CTGCCTCTCATGTCTTAGGCTG i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e rheMac8.chr6 251827 9154 + 180051392 I a score=3276.000000 s hg38.chr3_KI270779v1_alt 19793 1 + 205312 T s panTro5.chr3 200012890 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 502830 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844245 1 - 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785598 1 + 123690457 t i nomLeu3.chr11 I 142 C 0 s macNem1.NW_012013899v1 78300 1 - 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198403 1 + 16742782 T i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89566104 1 - 91010382 T i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 843805 1 + 1687011 T i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e rheMac8.chr6 251827 9154 + 180051392 I a score=33885.000000 s hg38.chr3_KI270779v1_alt 19794 9 + 205312 GGAGCTGGA s panTro5.chr3 200012891 9 + 202621043 GGAGCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 502831 9 - 205426864 GGAGCTGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844246 9 - 880730 GGAGCTGGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785599 9 + 123690457 gaagccgcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 260981 9 + 180051392 ggagctgga i rheMac8.chr6 I 9154 C 0 s macNem1.NW_012013899v1 78301 9 - 100774 GGAGCTGGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198404 9 + 16742782 GGAGCTGGA i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89566105 9 - 91010382 GGAGCTGGA i chlSab2.chr4 C 0 I 2264 s colAng1.NW_012116910v1 843806 9 + 1687011 GGAGCTGGA i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I a score=14880.000000 s hg38.chr3_KI270779v1_alt 19803 6 + 205312 AACTCG s panTro5.chr3 200012900 6 + 202621043 AACTCG i panTro5.chr3 C 0 C 0 s panPan2.chr3 502840 6 - 205426864 AACTCG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844255 6 - 880730 AACTCG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785608 6 + 123690457 gacccg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 260990 6 + 180051392 gacccg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 78310 6 - 100774 GACCCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198413 6 + 16742782 GACCCG i cerAty1.NW_012009470v1 C 0 C 0 s colAng1.NW_012116910v1 843815 6 + 1687011 GACCCG i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6146312 30692 + 6207128 I e chlSab2.chr4 89566114 2264 - 91010382 I a score=12321.000000 s hg38.chr3_KI270779v1_alt 19809 3 + 205312 CGG s panTro5.chr3 200012906 3 + 202621043 CGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 502846 3 - 205426864 CGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844261 3 - 880730 CGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785614 3 + 123690457 cgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 260996 3 + 180051392 tgg i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 78316 3 - 100774 CGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198419 3 + 16742782 CGG i cerAty1.NW_012009470v1 C 0 C 0 s manLeu1.NW_012109696v1 6177004 3 + 6207128 cgg i manLeu1.NW_012109696v1 I 30692 C 0 s colAng1.NW_012116910v1 843821 3 + 1687011 CGG i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e chlSab2.chr4 89566114 2264 - 91010382 I a score=29870.000000 s hg38.chr3_KI270779v1_alt 19812 6 + 205312 AGGAGC s panTro5.chr3 200012909 6 + 202621043 AGGAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 502849 6 - 205426864 AGGAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844264 6 - 880730 AGGAGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785617 6 + 123690457 aggagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 260999 6 + 180051392 aggaTC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 78319 6 - 100774 AGGAGC i macNem1.NW_012013899v1 C 0 I 2064 s cerAty1.NW_012009470v1 16198422 6 + 16742782 AGGAGC i cerAty1.NW_012009470v1 C 0 I 3 s chlSab2.chr4 89568378 6 - 91010382 AGGAGC i chlSab2.chr4 I 2264 C 0 s manLeu1.NW_012109696v1 6177007 6 + 6207128 aggagC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843824 6 + 1687011 AGGAGC i colAng1.NW_012116910v1 C 0 I 3 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T a score=-8088.000000 s hg38.chr3_KI270779v1_alt 19818 5 + 205312 TGGTA--- s panTro5.chr3 200012915 5 + 202621043 TGGTA--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 502855 5 - 205426864 TGGTA--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844270 5 - 880730 TGGTA--- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785623 1 + 123690457 t------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 261005 2 + 180051392 ---TG--- i rheMac8.chr6 C 0 I 3 s cerAty1.NW_012009470v1 16198431 2 + 16742782 ---TG--- i cerAty1.NW_012009470v1 I 3 C 0 s chlSab2.chr4 89568384 5 - 91010382 ---TGGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6177013 5 + 6207128 ---CGGAA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843833 2 + 1687011 ---TG--- i colAng1.NW_012116910v1 I 3 C 0 e macNem1.NW_012013899v1 78325 2064 - 100774 I e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T a score=15435.000000 s hg38.chr3_KI270779v1_alt 19823 4 + 205312 TTGG s panTro5.chr3 200012920 4 + 202621043 TTGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 502860 4 - 205426864 TGGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844275 4 - 880730 TTGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785624 2 + 123690457 --ga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 261010 4 + 180051392 TTGG i rheMac8.chr6 I 3 C 0 s macNem1.NW_012013899v1 80389 4 - 100774 TTGG i macNem1.NW_012013899v1 I 2064 I 2012 s cerAty1.NW_012009470v1 16198433 4 + 16742782 TTGG i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89568389 4 - 91010382 TTGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6177018 4 + 6207128 TTGG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843835 4 + 1687011 TTGG i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T a score=80643.000000 s hg38.chr3_KI270779v1_alt 19827 18 + 205312 TGTTTCTAGTTGAGGGTC s panTro5.chr3 200012924 18 + 202621043 TGTTTCTAGTTGAGGGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 502864 18 - 205426864 TGTTTCTAGTTGAGGGTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844279 18 - 880730 TGTTTCTAGTTGAGGGTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785626 18 + 123690457 tgttccagtttgagggtc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 261014 18 + 180051392 TGTTTCTAGTTGAGGGTC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 82405 18 - 100774 TGTTTCTAGTTGAGGGTC i macNem1.NW_012013899v1 I 2012 C 0 s cerAty1.NW_012009470v1 16198437 18 + 16742782 TGTTTCTCATTGAGGGTT i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89568393 18 - 91010382 TGTTTGTAGTTGAGGGTC i chlSab2.chr4 C 0 I 3268 s manLeu1.NW_012109696v1 6177022 18 + 6207128 TGTTTCTAGTTGAGGGTC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843839 18 + 1687011 TGTTTCTAGTTGAGGGTC i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T a score=11169.000000 s hg38.chr3_KI270779v1_alt 19845 3 + 205312 GTG s panTro5.chr3 200012942 3 + 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 502882 3 - 205426864 GTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844297 3 - 880730 GTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120785644 3 + 123690457 ttg i nomLeu3.chr11 C 0 I 3854 s rheMac8.chr6 261032 3 + 180051392 GTG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 82423 3 - 100774 GTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012009470v1 16198455 3 + 16742782 GTG i cerAty1.NW_012009470v1 C 0 C 0 s manLeu1.NW_012109696v1 6177040 3 + 6207128 GTG i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 843857 3 + 1687011 GTG i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e chlSab2.chr4 89568411 3268 - 91010382 I a score=3600.000000 s hg38.chr3_KI270779v1_alt 19848 1 + 205312 G s panTro5.chr3 200012945 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 502885 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844300 1 - 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 261035 1 + 180051392 G i rheMac8.chr6 C 0 I 4841 s macNem1.NW_012013899v1 82426 1 - 100774 G i macNem1.NW_012013899v1 C 0 I 2872 s cerAty1.NW_012009470v1 16198458 1 + 16742782 G i cerAty1.NW_012009470v1 C 0 I 24350 s manLeu1.NW_012109696v1 6177043 1 + 6207128 G i manLeu1.NW_012109696v1 C 0 I 1256 s colAng1.NW_012116910v1 843860 1 + 1687011 G i colAng1.NW_012116910v1 C 0 I 5918 e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e chlSab2.chr4 89568411 3268 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1282143.000000 s hg38.chr3_KI270779v1_alt 19849 2526 + 205312 TATTTCCAGGGTTTCACAGAGGCCAGATTTTATTTCAGTTACTCAGAAGAGAAAGAAAATGTCTTCTGAAAGAGGTGAACTCAGTCATTACCAATAGAAAAAGTATCCACTGTATTTATCTCTTATACAAACAGAAAAATATAACATTTTCCCCCTTAGAatatatatatatatatatatatatatatatatatatatatatatatatatataAAACTTAAGGTTCTATTGTATGTATCCGAACAATAAAATCTGGAAACCAGCATGAAACTCTATTATTCACATGTTAAAATGTTGAAACTATGACCAAAATATGAAAACTGCTGGAGCTATCAGAAAGACACAAGACAAAAAGCTTCTTGCATATGTATAAACTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTACTTTCCAGTTTAAAAACTTTAATCCTAAATTAAAAAAAAAAAT-CTATACACAAACCACTGATTTGCCCAGACCaaagaaagaaagaaagaaagaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaAAGAAATCAGCGGTAAGGTAAGCAGGACCCAGAGGAGCTGATATTCACAGTTCTTACATGGACAACTCTTTCAGGAATTATCCATAAAGTACTTTATTTTACAACCTGCTTTTCTTATAAAACTAAAGGTGCACTTTTTTACATAAAAGTTTTATACAGTGTTAAAACCAGAACTGTGTGTAAAATACTGCATGTAAATGTTTCTAAATAGTCTTGTTCCAGTGGTTCATCGGTGACTTCTGTGGCTTCGTCATCATTATCCATGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGGAATTGGATCCTACTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCACTACTTTCAGGGCCTTCGTTTTCACTACCTTCAGAATGTAGTAAATCTTTCTCAGCTTGAGACACATCAGATTCCTCCATTTCATTATTTTCCTCAGAAGTCTCTTCATTCACAGTTGAGGCATCATCAGATTCTTTTTCTTGGTTTTTTCTTTCTGGGACCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAAATTTTATATTCAAAATACCTCCACAGTTAAGTTTCGTGAATTCTGATGTTCTGTAGTTCAAATCACATCCCCTGAAATTCAGCAGCAACTGCATACAGGTGGGAGAAAAGCCCAGCGTCGACATTACAAGGAGTTCCATGATGTACAATTCTTTCACAAAAACAATGAATGCAAGAATTTGAGGATCTCCTTACTCCTCCCTTTTACAGATGGTCTCTCAATCCcttcttcttcctcttca---tcttcatcttcttctGAACGCGCTGCCGGGTACCATGGCTTTTTTTGTCTTTATCATGAGATGAAGGTGATGCTTCTGTTTCTTCTACCATAACTGAAGAAATTTCGCTGCAAGTCGCTTGACTGGCTATTTCTCCGACTTCGCCTTTTTTGTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTCTCAAAGGGCTCACTGAGGAAACTTCTGATTCAGATGTCGAAGAGTCAC--TGAGTTTTCTCTTCATTTTGCTGCAAATTTGCCTCTTTGCTGTCTGTGCTCTCAGGCCACCCATTTGTTGTCATGGGGGCTGACAGAGAAACCTTTGGTCGATTACGTGGCCTGGGTGTCCCAGGCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATCACACCATTCATTCGATTTAAACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTCTGAGAAA-TTTGTCTGTTCCTGTATAGTTTCTCCTCGGATCTGTTAACAATTCACATAATCGCTGAATAGTAAAAGGGATACGGTTAAATCCAGTGACAGTTTTTCAGTATTCTTCCCTTTGTTTCATCACAGGGAATATATTCGACATTAGGGTTGGGAGGACCTCTTGGCGCAGGAGCTGAAGTTCTGAAATCATCCATCACTTTCTCCAGTTTGAAAATAAAATAGCCTTTAAATTGGGACCACGGAATCTGTTTCTCCAGTCTTGGCTACATGACAAAAGGAACTGATCCAGGACAGGACAGACTTTCTTTTT-TGCCTCTTCTCAAAATCTTCCAGCGCCTCCTGGAGCCTGTCGACGTCCATGGCTTCCCGGAGTCCCTCACAGCCTCCGCCTCCCTCCGCGGGTCTCTTGGGGACCGGAACGCCTCCCCCCACCCCCCGACGTCCTCCCACTCCCTCGCACACCCTCCAGCACGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCC-GGGGAAGCGTGTGAGAGAGTGAGACCGACAGAGTGAGCACCTCCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCACATCACCC s panTro5.chr3 200012946 2417 + 202621043 TATTTCCAGGGTTTCACAAAGGCCAGATTTTATTTCAGTTACTCAGAAGAGAAAGAAAATGTCTTCTGAAAGAGGTGAATTCAATCATTACCAATAGAAAAAGTATCCACTGTATTCATCTCTTATACAAACAGAAAAATATAACATTTTCCCCCTTAGAata---------------------------------atatatatatatatataAAACTTAAGGTTCTATTGTATGTATCCGAACAATAAAATCTGGAAACCAGCATGAAACTGTATTATTCACATGTTAAAATGTTGAAACTATGACCAAAATATGAAAACTGCTGGAGCTATCAGAAAGACACAAGACAAAAAGCTTCTTGCATATGTGTAAACTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTACTTTCCAGTTTAAAAACTTTAATCCTAAATTAAAAAAAAAAAAACTATATACAAACCACTGATTTGCCCAGACCAAAGAAAGAAAGA---------------------------------------------------------------------------------GAAATCAGCGGTAAGGTAAGCAGGACCCAGAGGAGCTGATATTCACAGTTCTTACATGGACAACTCTTTCAGGAATTATCCATAAAGTACTTTATTTTACAACCTGCTTTTCTTGTAAAACTAAAGGTGCACTTTTTTACATAAAAGTTTTATACAGTGTTAAAACCAGAACTGTGTGTAAAATACTGCATGTAAATGTTTCTAAATAGTCTTGTTCCAGTGGTTCATCGGTGACTTCTGTGGCTTCGTCATCATTATCCACGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGGAATTGGATCCTACTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCACTACTTTCAGGGCCTTCGTTTTCACTACCTTCAGAATGTAATAAATCTTTCTCAGCTTGAGACACATCAGATTCCTCCATTTCATTATTTTCCTCAGAAGTCTCTTCATTCACAGTTGAGGCATCATCAGATTCTTTTTCTTGGTTTTTTCTTTCTGGGATCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAAATTTTATATTCAAAATACCTCCACAGTTAAGtttcgtgaattctgatgttctgtagttcaaatcacatcccctgaaattcagcagcaactgcatacagGTGGGAGAAAAGCCCAGCGTCGGCATTACAAGGAGTTCCATGATGTACAGTTCTTTCACGAAAACAATGAATGCAAGAATTTGAGGATCTCCTTACTCCTCCCTTTTACAGATGGTCTCTCAATCCcttcttcttcctcttcatcttcttcatcctcttctGAACGCGCTGCCGGGTACCACGGCTTTCTTTCTCTTTATCGTGAGATGAAGGTGATGCTTCTGTTTCTTCTACCATAACTGAAGAAATTTCGCTGCAAGTCGCTTGACTGGCTGTTTCTCCAACTTTGCCTTTTTTGTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTTTCAAAGGGTTCACTGAGGAAACTTCTGATTCAGATGTCGAAGAGTCACTGTGAGTTTTCTCTTCATTTTGCTGCAAATTTGCCTCTTTGCTGTCTGTGCTCTCAGGCCACCCATTTGTTGTCATGGGGGCTGACAAAGAAACCTTT-GTCGATTAAGTGGCCTGGGTGTCCCAGGCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATAACACCATTCATTCGATTTAAACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTGTGAGAAA-TTTGTCTGTTCCTGTATAGTTTCTCCTTGGATCTGTTAACAATTCACATAATCACTGAATAGTAAAAGGGATACGGTTAAATCCAGTGACCG-TTTTCAGTATTCTTTCCTTTGTTTCATCAAAGGGAATATATTCGACATTAGGGTTGGGAGGACCTCTTGGCGCAGGAGCTGAAGTTCTGAAATCATCCATCACTTTCTCCAGTTTGAAAATAAAATAGCCTTTAAATTGGGACCACTGAATCTGTTTCTCCAGTCTTGACTACATGAC-AAAGAAACTGATCCAGGACAGGACAGACTTTCTTTTTCCCCCTCTTCTCAAAATCTTCCAGCGCCTCCTAGAGCCTCTCGACGTCCATGGCTTCCTGGAGTCCCTCACAGCCTCCGCCTCCCTCCGCGGGTCTCTTGGGGACCGGAACGCCTCCCCCCACCCCCTGACATCCTCCCACTCCCTCGCACACCCTCCAGCACGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCCAGGGGAAGCGTGTGAGAGAGTGAGACCGACAGAGTGAGCACCTCCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCACGTCACCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 502886 2442 - 205426864 TATTTCCAGGGTTTCACAAAGGCCAGATTTTATTTCAGTTACTCAGAAGAGAAAGAAAATGTCTTCTGAAAGAGGTGAATTCAATCATTACCAATAGAAAAAGTATCCACTGTATTCATCTCTTATACAAACAGAAAAATATAACATTTTCCCCCTTAGAata-------------------------------atatatatatatatatatataACTTAAGGTTCCATTGTATGTAGCCGAACAGTAAAATCTGGAAACCAGCATGAAACTCTATTATTTACATGTTAAAATGTTGAAACTATGACCAAAATATGAAAACTGCTAGAGCTATCAGAAAGACACAAGACAAAAAGCTTCTTGCATATGTATAAAGTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTTCTTTCCAGTTTAAAAACTTCAGTCCTAAATTTAAAAAAAAAT--CTATATACAAACCACTGATTTGCCCAGACCAAA-aaagaaaga---------------------------------------------------------aagaaagaaagaaagaaagaaagaGAAATCAGCGGTAAGGTAAGCAGGACCCAGAGGAGCTGATATTCACAGTTCTTACATGGACAACTCTTTCAGGAATTATCCATAAAGTACTTTATTTTACAACCTGCTTTTCTTGTAAAACTAAAGGTGCACTTTTTTACATAAAAGTTTTATATGGTGTTAAAACCAGAACTGTGTGTAAAATACTGCATGTAAATGTTTCTAAATAATCTTGTTCCATTGGTTCACCGGTGACTTCTGTGGCTTTGTCATCATTTTCCACGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGGAATTGGATCCTACTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCACTACTTTCAGGGCCTTCGTTTTCACTACCTTCAGAATGTAGTAAATCTTTCTCAGCTTGAGACACATCAGATTCCTCCATTTCATTATTTTCCTCAGAAGTCTCTTCATTCACAGTTGAGGCATCATCAGATTCTTTTTCTTGGTTTTTTCTTTCTGGGATCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAAATTTTATTTTCAAAATACCTCCACAGTTAAGTTTCGTgaattctgatgttctgtagttcaaatcacatcccctgaaattcagcagcaactgcatacagGTGGGAGAAAAGCCCAGCGTCGGCATTACAAGGAGTTCCATGATGTACAGTTCTTTCACGAAAACAATGAATGCAAGAATTTGAGGATCTCATTACTCCTCCCTTTTACAGATGGTCTCTCAATCCcttcttcttcctcttcatcttcttcatcctcttctGAACACGCTGCCGGGTGCCACGGCTTTCTTTGTCTTTATCGTGAGATGAAGGTGATGCTTCTGTTTCTTCTACCATAACTGAAGAAATTTCGCTGCAAGTCGCTTGACTGGCTGTTTCTCCAACTTTGCCTTTTTTGTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTTTCAAAGGGTTCACTGAGGAAACTTCTGATTCAGATGTCGAAGAGTCACTGTGAGTTTTCTCTTCATTTTGCTGCAAATTTGCCTCTTTGCTGTCTGTGCTCTCAGGCCACCCATTTGTTGTCATGGGGGCTGACAGAGAAACCTTTGGTCGATTAAGTGGCCTGGGTGTCCCAGGCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATAACACCATTCATTCGATTTAAACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTCTGAGAAATTTTGTCTGTTCCTGTATAGTTTCTCCTTGGATCTGTTAACAATTCACATAGTCGCTGAATAGTAAAAGGGATACGGTTAAATCCAGTGACCG-TTTTCAGTATTCTTTCCTTTGTTTCATCAAAGGGAATATATTCGACATTAGGGTTGGGAGGACCTCTTGGCGCAGGAGCTGAAGTTCTGAAATCATCCATCACTTTCTCCAGTTTGAAAATAAAATAGCCTTTAAATTGGGACCACGGAATCTGTTTCTCCAGTCTTGGCTACATGAC-AAAGAAACTGATCCAGGACAGGACAGACTTTCTTTTTCCCCCTCTTCTCAAAATCTTCCAGCGCCTCCTGGAGCCTCTCGACGTCCATGGCTTCCCGGAGTCCCTCACAGCCTCCGCCTCCCTCCGCGGGTCTCTTGGGGACCGGAACGCCTCCCCCCACCCCCCGACATCCTCCCACTCCCTCGCACACCCTCCAGCACGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCCAGGGGAAGCGTGTGAGAGAGTGAGACCGACAGAGTGAGCACCTCCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCGCGTCACCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 844301 2417 - 880730 TATTTCCAGGGTTTCACAAAGGCCAGATTTTATTTCAGTTACTCAGAAGAGAAAGAAAATGTCTTCTGAAAGAGATGAACTCAGTCATTACCAATAG-AAAAGTATCCACTGTATTTATCTCTTATACAAACAGAAAAATATAACATTTTCCCCCTTAGAATA-------------------------------------ATATATATATATATAATT--AGGTTCCATTGTATGTAGCCAAACA-TAAAATCTGGAAACCAGCATGAAACCCTATTATTCACATGTTAAAATGTTGAAACTATGACCAAAATATGAAAACTGCTAGAGCTATCAGAAAGACAGAAGACAAAAAGCTTCTTACATATGTATAAACTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTACTTTCCAGGTTAAAAACTTTAATCCTAAATTAAAAAAAAAAT--CTATACACAAACCACTGATTTGCCCAGACCaaaaaaagaaaga---------------------------------------------------------aagaaag---------aagaaagaGAAATCAGCAGTAAGGTAAGCAGGACCCAGAGGAGCTGATATTCACAGTTCTTACATGGACAACTCTTTCAGGAATTATCCATGAAGTACTTTATTTTACAACCTGCTTTTCTTGTAAAACTAAAGGTGCACTTTTTTACATAAAAGTTTTATACAGTGTTAAAACCAGAACTGTGTGTAAAATACTGCATGTAAATGTTTCTAAATAGTCTTGTTCCATTGGTTCATCGGTGACTTCTGTGGCTTCATCATCATT-TCCATGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGGAATTGGATCCTACTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCAGTACTTTCAGGGCCTTCGTTTTCACTACCTTCAGAATGTAGTAAATCTTTCTCAGCTTGAGACACATCAGATTCCTCCATTTCATTATTTTCCTCAGAAGTCTCTTCATTCACAGTTGAGGCATCATCAGATTCTTTTTCTTGTTTTTTACGTTCTGGGATCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAAATTTTATTTTCAAAATACCTCCACAGTTAAGtttcatgaattccgatgttctgtagttcaaatcacatcccctgaaattcagcagcaactgcatacagGTGGGAGAAAAGCCCAGCGTCGGCATTACAAGGAGTTCCATGATGTACAGTTCTTTCACAAAAACAATGAATGCAAGAATTTGAGGACCTCCTTACTCCTCCCTTTTACAGATGGTCTCTCAATCCcttcttcttcctgttca---tcttcatcctcttctGAACGCGCTGCCGGGTACCACGGCTTTCTTTGTCTTTATCGTGAGATGAAGGTGATGCTTCTGTTTCTTCTACCATAACTGAAGAAAGTTCTCTGCAAGTCGCTTGACTGGCTGTTTCTCCGACTTCGCC-TTTTTGTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTCTCAAAGGGCTCACCGAGGAAACTTCTGATTCAGATGTGGAAGAGTCACTGTGAGTTTTCTCTTCACTTTGCTGCAAATTTGCCTCTTTGCTGTCTGTGCTCTCAGGCCACCCATTTGTTGTCATGGGGGCTGACAAAGAAACCTTTGGTCAATTAAGTGGCCTGGGTGTCCCAGCCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATGACACCATTCATTCGATTTAAACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTCTGAGAAA-TTTGTCTGTTCCTGTATAGTTTCTCCTTGGATCTGTTAACAATTCACATAGTCGCTGAATAGTAAAAGGGATACGGTGAAATCCAGTGACAG-TTTTCAGTATTCTTTCCTTTGTTTCATCAAAGGGAATATATTCGACATTAGGGTTGGGAGGAGCTCTTGGCGCAGGAGCTGAAGTTCTGAAATCATCCGTCACTTTCTCCAGTTTGAAAATAAAATGGCCTTTAAATTGGGACCACTGAATCTGTTTCTCCAGTCTTGGCTACATGAC-AAAGAAACTGATCCAGGACAGGACAAACTTTCTTTTT-CCCCTCTTCTCAAAATCTTCCAGCGCCTCCTGGAGCCTGTCGACGTCCATGGCTTCCCGGAGTCCCTCACAGCCTCCGCCTCCCTCCGCGGGTCTCTTAGGGACCGGAACACCTCCCCCCACCCCCCGACGTCCTCCCACTCCCTCGCACACCCTCCAGCACGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCCAGGGGAAGCGTGTGAGAGAGTGAGACCGACAGAGTGAGCACCTCCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCACGTCACCC i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 82427 2872 - 100774 I e calJac3.chr5 41963624 7606 + 159171411 T e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 843861 5918 + 1687011 I e manLeu1.NW_012109696v1 6177044 1256 + 6207128 I e chlSab2.chr4 89568411 3268 - 91010382 I e cerAty1.NW_012009470v1 16198459 24350 + 16742782 I e rheMac8.chr6 261036 4841 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=8190.000000 s hg38.chr3_KI270779v1_alt 22375 2 + 205312 TA s panTro5.chr3 200015363 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 505328 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 846718 2 - 880730 TA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 265877 2 + 180051392 TA i rheMac8.chr6 I 4841 C 0 s cerAty1.NW_012009470v1 16222809 2 + 16742782 TA i cerAty1.NW_012009470v1 I 24350 C 0 s chlSab2.chr4 89571679 2 - 91010382 TA i chlSab2.chr4 I 3268 C 0 s manLeu1.NW_012109696v1 6178300 2 + 6207128 TA i manLeu1.NW_012109696v1 I 1256 C 0 s colAng1.NW_012116910v1 849779 2 + 1687011 TA i colAng1.NW_012116910v1 I 5918 C 0 s calJac3.chr5 41956018 2 + 159171411 TA i calJac3.chr5 T 7606 C 0 e macNem1.NW_012013899v1 82427 2872 - 100774 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=3433556.000000 s hg38.chr3_KI270779v1_alt 22377 811 + 205312 AAAAGTCATTTCTTGGAGAAGCGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTTCTATTCTGTGAGTTCTGGCAATTGTGTCCGTTCACCCAGCCTGGTGATGCAGCAGGTGTCACAGAAGGACCCTGTCCCAGCTGGTCCTGCTCCACTGCTAGGATG-GTGTGGCCTCTG--ATCTGTGACC-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCCGTGGATGGAAG---------CTCATGGATGTTCCTTCCTGATGTTCATCTGCCACCATGCTATTGAATGCA-----TCTTGTttataactgtcttctaaatattgaatagaaataaagcgtttttacagtatgggtaaggtataaagaatattgacacattggacacagaggacctccaccaagtttagggagtagaatctgaagagacatagctttggatg-ctccctggaggccctgcctgagtcccagtcccttcccttctcctacggagggaatcacttcctgctttagtctttattatttgcacactttccttcatagtatgtttctttcaccgtg--tgtgtacatccctaaaagatatgccatttagtttttgaactttctgttttctttttg-aggcagggtcttgctctgttgcctcggctgtagttttgaactttgacgtgagggaattctcctgcgtggctgctcctgcactgca-tggctctgagcacctgctctgtgtctatttttgtcctccattctctccc s panTro5.chr3 200015365 806 + 202621043 AAAAGTTATTTCTTGGAGAAGCTATGGATGACAGAGATTAATCTGAGAGTTACAATTAACGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTTCTATTCTGTGAGTTCTGGCAATTGTGTCCATTCACCCAGCCTGGTGATGCAGCAGGTGTCACAGAAGGACCCTGTCCCAGCTGGTCCTGCTCCACTGCTAGGATG-GTGTGGCCTCTG--ATCTGTGACT-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCCGTGGATGGAAG---------CTCATGAATGTTCCTTCCTGATGTTCATCTGCCACCTTGCTATTGAATGCA-----TCTTGTTTATAACTGTCTTCTACATATTGAatagaaataaagcatttgtacagtatgggtaag--ataaagaatattgacacattggacacagaggacctgcaccaagtttagggagtagaatctgaagagacataactttggatg-ctccctggaggccctgcctgagtcccagtcccttccctt---ctacggagggaatcacttcctgctttcgtctttattatttgcacactttccttcatagtatgtttctttcaccgtg--tgtgtacatccctaaaagatatgccatttagttttTGAACtttctgttttctttttg-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGACGTGAGGAAATTCTCCTGCGTGGCTGCTCCTGCACTGCA-TGGCTCTGAGCATCTGCTCTATGACTATTTTTGTCCTCCATTCTCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 505330 810 - 205426864 AAAAGTTATTTCTTGGAGAAGCAACGGATGACAGAGATTAATCTGAGAGTTACAATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGCTATTCTGTGAGTTCTGGCAATTGTGTCCGTTCACCCAGCCTGGTGATGCAGCAGGTGTCACAGAAGGACCCTGTCCCAGCTGGTCCTGCTCCACTGCTAGGATG-GTGTGGCCTCTG--ATCTGTGACC-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCCGTGGATGGAAG---------CTCATGAATGTTCCTTCCTGATGTTCATCTGCCACCTTGCTATTGAATGCA-----TCTTGTTTACAACTGTCTTCTACATATTGAatagaaataaagcatttgtacagtatgggtaag--ataaagaatattgacacattggacacagaggacctgcaccaagtttagggagtagaatctgaagagacataactttggatg-ctccctggaggccctgcctgagtcccagtcccttcccttctcctacggagggaatcacttcctgctttcgtctttattatttgcacactttccttcatagtacgtttctttcaccgtg--tgtgtacatccctaaaaaataagccatttagtttttgaactttCTGTTTTCTTTTTGTAGGCAGGGTCTTGCTCTGTTGCCTCGGCTGTAGTTTTGAACTTTGACGTGAGGAAATTCTCCTGCGTGGCTGCTCCTGCACTGCA-TGGCTCTGAGCATCTGCTCTGTGTCTATTTTTGTCCTCCATTCTCTCCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 846720 807 - 880730 AAAAGTTATTTCTTGGAGAAGCGATGGATGAC--AGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGACACTGCTATTCTGTGAGTTCTGTCAATTGAGTCCGTTCATCCAGCCTGGTGATGCAGCAGGTGTCACAGAAGGACCCTGTCCCAGCTGGTCCTGCTCCACTGCTATGATG-GTGTGGCCTCTG--ATCTGTGACT-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAG---------CTCATGGATGTTCCTTCCTGATGTTCATCTGCCACCTTGCTATTGAATGCA-----TCTTGTttataactgtcttctaaatattgaatagaaataaagcatttgtacagtatgggtaaggtataaagaatattgacacattggacacagaggacctccaccaagtttagggagtagaatctgaagagacataactttggatg-ctccctggaggccctgcctgggtcccagtcccttcccttctcctacggagggaatcacttcctgctttagtctttattatttgcacactttccttcatagtacgtttctttcaccgtg--tgcgtacatccctaaaaaatatgccatttagttttTGAACtt--tgttttctttttg-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGACGTGAGGAAGTTCTCCTGCGTGGCTGCTCCTGCACTGCA-TGGCTCTGAGCATCTGCTCTGTGTCTATTTTCGTCCTCCATTCTCTCCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 265879 801 + 180051392 AAAAGTTATTTCTTGGAGAAGCGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCGTTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GTGCGGCCTCTG--CTCT-----------GTGTCGTGAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAC---------CTCATGGATGTTCTTTCCTGATGTTCATCGGCCATCTTGCTATTTAATGCA-----TCTTGTttataactgtcttctaaatattgaatagaaataaagcattggtacaatatgggtaaaatataaagaacatcgacccattggacacagaggacctccaccaagtttagggaat-gaatctgaagagacgtaacttcagatg-ttccctggaggccctgcctgagtcccagtcccttcccttcttctacagagggaatcacttcctgctttagtctttattgttcccgtacttttcttcacagtacgtttctttcaccgcgtatgtgtacatccc-aaaaaatatgccatttagttttTGAACtttctgttttctttttg-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGATGTGAGGAAATTCTCCTGCGTGGCTGCTCCTATGCTGCA-TGGCTCTGAGCATCTGCTCAATGTCTGTCTTTGTCTTCCATTCTCCCCC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 85299 801 - 100774 AAAAGTTATTTCTTGGAGAAGCGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GTGCAGCCTCTG--CTCT-----------GTGTCGTGAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAC---------CTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCTATTTAATGCA-----TCTTGTttataactgtcttctaaatattgaatagaaataaagcgttggtacagtatgggtaaaatataaagaatatcgacacattggacacagaggacctccaccaagtttagggaat-gaatctgaagagacataacttcagatg-ttccctggaggccctgcctgagtcccagtccctccccttctcctacagagggaatcacttcctgctttagtctttattgttcccatactttttttcacagtacgtttctttcaccgcgtatgtgtacatccc-ccaaaatatgccatttagttttTGAACtttctgttttctttttg-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGATGTGAGGAAATTCTCCTGCGTGGCTGCTCCTATGCTGCA-TGGCTCTGAGCATCTGCTCAATGTCTGTTTTTGTCTTCCATTCTCCCCC i macNem1.NW_012013899v1 I 2872 M 552 s cerAty1.NW_012009470v1 16222811 802 + 16742782 AAAAGTTATTTCTTGGAGAAGCGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGCGGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GCGCGGCCTCTG--CTCT-----------GTGTCGTGAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAC---------CTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCTATTTAATGCA-----TCTTGTttataactgtcttctaaatattgaatagaaataaagcattggtacagtatgggtaaaatataaagaatatcgacacattggacacagaggacctccaccaagtttagggaatagaatctgaagagagataacttcagatg-ttccctggaggccctgcctgagtcccagtcccttcccttctcctacagagggaatcacttcctgctttaatctttattgttcccgtacttttcttcacagtacgtttcttttaccgtgtatgtgtacatccc-aaaaaatatgccatttagttttTGAACtttctgttttcttttag-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGATGTGAGGAAATTCTTCTGTGTGGCTGCTCCTACGCTGCA-TGGCTCTGAGCATCTGCTCAATGTCTGTTTTTGTCTTCAGTTCTCCCCC i cerAty1.NW_012009470v1 C 0 C 0 s chlSab2.chr4 89571681 798 - 91010382 AAAAGTTATTTCTTGGAGAAGCGATGGATGACAGACATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GTGCGGCCTCTG--CTCT-----------GTGTTGTGAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAC---------CTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCCATTTAATGCA-----TCTTGTTTATAACTGTCTTCTaaatattgaatagaaataaagcattggtacaatatgggtaaaatataaagaatatcgacacattggacacagaggacctccaccaagtttagggaatagaatctgaagagacataacttcagata-ttccctggaggccctgcctgagtcccagtcccttcccttctcctacagagggaatcacttcctgctttaatctttattgttcccgtacttttcttcacagtatgtttctttcaccgcgtatgtgtacatccc-aaaaaatatgccatttagttttTGAA----CTAttttctttttg-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGATGTGAGGAAATTCTCCTGTGTGGCTGCTCCTGCACTGCA-TGGCTCTAAGCATCTGCTCAATGTCTGTTTTTGTCTTCCATTCTCCCCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6178302 802 + 6207128 AAAAGTTATTTCTTGGAGAAGCGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GTGTGGCCTCTG--CTCT-----------GTGTCGTTAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAC---------CTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCTATTTAATGCA-----TCTTGTttataactgtcttctaaatattgaatagaaataaagcattggcacaatattggtaaaatataaagaatatcaacacattggacacagaggacctccaccaagtttagggaatagaatctgaagagagataacttcagatg-ttccctggaggccctgcctgagtcctagtcccttcccttctcctacagagggaatcacttcctgctttaatctttattgttcccatacttttcttcacagtacgtttcttttaccgcatatgtgtacatccc-aaaaaatatgccatttagttttTGAACtttctgttttcttttag-aggcagggtcttgctctgttgcctcggctgtagtTTTGAACTTTGATGTGAGGAAATTCTCCTGTGTGGCTGCTCCTACGCTGCA-TGGCTCTGAGCATCTGCTCAATGTCTGTTTTTGTCTTCGATTCTCCCCC i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 849781 800 + 1687011 AAAAGTTATTTCTTGGAGAAGCAATGGATGACAGAGATTAATCTGGGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTTGGTGCTGATACTGATATTGTGTGAGTTCTGGCAATTAAGCCTGTTCGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGGTCCTGCTCCA---CTATGATG------GCCTCTGCTCTCT-----------GTGTCGTGAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAAC---------CTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCTATTTAATGCAATGTTTAATGTTTATGACCGTCTTCTAAACATTGAatacaaataaagcattggtacaatatgggtaaaatataaagaatatcgacacatgggacacagaggacctccaccaagtttagggaatagaatctgaagagacatgacttcagatg-ttccctggaggccctgcctgagtcccagtcccttcccttctcctacagagggaatcacttcttgctttagtctttattgttcccatacttttcttcacagtatgtttctttcaccgcgtatgtgtacatcct-aaaaaatacgacatttggtttttgaa----ctgttttctttttg-aggcagggtcttgctctgttgcctcggctatagttttgaactttgatgtgaggaaattctcctgtgtggctgctcctgcgctgca-tggctctgagcatctgctcaatgtctgtttttgtcttccattctccccc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41956020 801 + 159171411 AAACGTTGTTTCATGGAGAAGTGATGGAGGACAGAGATTAATCTGAGAGTTG-TATTGATGGAGAAACTGAGAACTTACCA--TTTCCCGTGAGGTTTCGGTGTGG--AATGATACTCTGTGCGTTCTGGCAGCTGAGTCCGTTCACACAGCCTGGTGATGCAGTAGGTGTTACAGAAGGG-CCTCTCCCAGCTGGTCCTGCCTCTCTGCTGTGATGAGTGCTGCCTCTG--ATCCCCGACCACTGACTGTCTTGAGAGGAGACCAGGCCTATGAGCACAAGGGTGTCCATGGTGAGGTTCCATGGATGGAGCACAGGGACGCTCCTG-ATGTGCCTTCCT-ATGCTCATCCGCCATCTTGCAATT-AATGCA-----TCTTGTTTATAACTGTCTTCTAAAGACTGGGTAGAaa-aaagcatttgtaccatatgggtcagggataaagaat-------------aagcataggacctctaccaagtttagggaataaaaac-aaagagacagaactttggatgcttccctggaggcccctcctgagtcccagtcccttccctt---ctacagagggagtcactttctg-tttagcctttcttattcctgtacttttctttatagtttatttctttcaccatctacatgtttatccctaaacaatatgccatttagtttttgaagtttctg-tgtctttttg-agacagggtcttgctctgctgctgcggccatagttttgaactccgatgtggagaaattctcctgtgtggctgctcctaggctgcactgggtctgagcatctgctccatgtctattcttgtcctccattctcttcc i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=135362.000000 s hg38.chr3_KI270779v1_alt 23188 37 + 205312 tgagacccacccacactgacatggctcattttcattg s panTro5.chr3 200016171 37 + 202621043 TGAGACCCACCCACACTGACATGgctcattttcattg i panTro5.chr3 C 0 C 0 s panPan2.chr3 506140 37 - 205426864 TGAGACCCACCCACACTGACATGGCtcattttcattg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 847527 37 - 880730 TGAGACCCACCCACACTGACATGGCTCAGTTTCATTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 266680 37 + 180051392 TGAGACCCACCCACACTGATGTGGTTCATTTTCATTG i rheMac8.chr6 C 0 I 972 s cerAty1.NW_012009470v1 16223613 37 + 16742782 TGAGACCCACCCACACTGACGTGGTTCATTGTCATTG i cerAty1.NW_012009470v1 C 0 I 971 s chlSab2.chr4 89572479 37 - 91010382 TGAGACCTACCCACACTGATGTGGTTCATTTTCATTG i chlSab2.chr4 C 0 I 1704 s manLeu1.NW_012109696v1 6179104 36 + 6207128 -GAGACCCACCCACACTGATGTGGTTCATTTTCATTG i manLeu1.NW_012109696v1 C 0 I 4059 s colAng1.NW_012116910v1 850581 37 + 1687011 tgagacccacccacgctgacgtggttcattttcattg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41956821 37 + 159171411 cgagacccatccacattgacgttattcattttcactg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=387844.000000 s hg38.chr3_KI270779v1_alt 23225 349 + 205312 ctgcatggtctcccgtcgtctgaggggagcatgggaaatgtcttcatcttcccgtggatgagtgtttggccaggttggggcccttaggactgtgttttgttgggaacgttcttgggcatttcttttgtacacaagcgcaagtttcttctggtcagtagcttt-caaattttaaaatttcatcccaggtaa-aaatgtaattttcctcataacccacaacacacacactttcatatacaagcatagcagaaa--------tatacttcacaagcg----ttagcagtgcctg-gtgttcctgcttctctccattctccccaacgctggcatggattgggttgtggga--------tttttgcccgtctggtgg s panTro5.chr3 200016208 349 + 202621043 ctgcatggtctcccgtcgtctgaggggagcatgggaaatgtcttcatcttcccgtggatgagcgtttggccaggttggggcccttaggactgtgttttgttgggaacgttctcgggcatttcttttgtacacaagcgcaagtttcttctggtcagtagcttt-caagttttaaaatttcatcccaggtaa-aaatgtaattttcctcataacccacaacacacactctttcatatacaagcatagcagaaa--------tatacttcacaagca----ttagcagtgcctg-gtgttcctgcttctctccattgtccccaacgctggcatggattgggttgtggga--------tttttgcccgtctggtgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 506177 353 - 205426864 ctgcatggtctcccgtcgtctgaggggagcatgggaaatgtcttcatcttcccgtggatgagcgtttggccaggttggggcccttaggactgtgttttgttgggaacgttcttgggcatttcttttgtacacaagcgcaagtttcttctggTCAGTAGCTTTCCAAGTTTTAAAATTTCATCCCAGGTAA-AAATGTAATTTTCCTCATAACCCACAACACACACTCTTTCATATACAAGCATAGCAGAAA--------TATACTTCACAAGCG----TTAGCAGTGCCTG-GTGTTCCTGCTTCTCTCCATTCTCCCCAACACCTGCATGGATTGGGTTGTTGGG-----GATTTTTTGCCCGTCTGGTGG i panPan2.chr3 C 0 I 23 s gorGor5.CYUI01015759v1 847564 357 - 880730 CTGCACGGTCTCCCGTCGTCTGAGGGGAGCATGGGAAATGTCTTCATCTTCCCGTGGATGAGTGTTTGGCCAGGTTGGGGCCCTTAGGACTGTGTTTTGTTGGGAACGTTCTTGGGCGTTTCTTTTGTACACAAGCGCAAGTTTCTTCTGGTCAGTAGCTTT-CAAGTTTTAAAATTTCATCCCAGGTAA-AAATGTAATTTTCCTCATAACCCACAACACACACTCTTTCATATACAAGCATAGCAGAAA--------TATACTTCACAAGCG----TTagcagtgcctg-gtgttcctgcttctctccattctccccaacgctggcatggattgggttgtggggttgtgggatttttgcccgtctggtgg i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 850618 352 + 1687011 ctgcgtgatctcccgtcatctgaggggagcacgggaaatgtcttcatttccctgtgggtgagtgtttgaccaggttggggcccttaggactgtgttttgctaggaacgttcttgtgcatttctttt-tacacaagtgcaagtttctttgggtcagtagcttt-caagttttaaaatttcatcccaggtaagaaatgtaattttcatcataacctacaacacacaccctttcatatacaagcataacaaaaa--------tatatttcataaaca-ttcttagcagtgcctg-gtgttcctgctactctccattctccccaacactggcattgattgggttgtggga--------tttctgctagtctggcgg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41956858 353 + 159171411 ctgcgtaatctcccatggtatgagggggacat-ggaagtgtcttcattttcctgttgatga-tgtttgtccaggttggggtccttaggactgtg--ttgcta-gaatattctagggcattt-ttttgtacacaagtgccagtttcttttggtgagtagcttt-cactttttaaaatttcatcccaggtaagaaatgtgattttcctcata----acaacacacaccatttcatatgcaagtataacaaaaaaaatttgttatcagtgataaaaaatttttattagtggctgagtgttcttgttgctctccactctccccaacacttgcatttattgggctgtggga--------tttttgccagtctggtgg i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6179140 4059 + 6207128 I e chlSab2.chr4 89572516 1704 - 91010382 I e cerAty1.NW_012009470v1 16223650 971 + 16742782 I e rheMac8.chr6 266717 972 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=221059.000000 s hg38.chr3_KI270779v1_alt 23574 298 + 205312 ttgtcacgtgatatctccccctgttaggctgagcccctcttcatgttttcattagccattcctccacatttcctcttctgtggagggccggttcagctcttttgcccagtttctgttaagttgtttgaatttttGCACTTTTCCTTTATTATTCCTATTACTATGtttttgagac--aatatcactctgccacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccatcttctgggttcaaatgattctcctgcctcagcctcccaagtggctgggattacaggcacg s panTro5.chr3 200016557 298 + 202621043 gtgtcacgtgatatctcccc--gttatgctgagcccctcttcatgttttcattagccattcctccacatttcctcttctgtggagggccggttcagctcttttgcccagtttctgttaagttgtttgaatttttgcacttttcctttattaTTCCTATTATTATGtttttgagacagagtctcactctgccacccaggttggagtgcagtggcgcgatctcagctcactgcaacctccatcttctgggttcaaatgattctcctgcctcagcctcccaagtggctgggattacaggcacg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 847921 299 - 880730 gtgtcacgtgatatctccccctgttaggctgagcccctcttcatgttttcattagccattcctccacatttcctcttctgtggagggccggttcagctcttttgcccagtttctgttaagttgtttgaatttttGCACtttttctttattattcctattactatgtttttgagacagaatatcactctgtcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccatcttct-ggttcaaatgattctcctgcctcagcctcccaagtggctgggattacaggcaca i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 850970 297 + 1687011 --gtttcacgatatctccccctattgggctgagcccctctttgtgttttcattagccgttcctccacatctcctcttctgtgaagggcc-gttcagctcttttgcacagtttctgttaagttgtttgaatttttGCACttttcttttattattccaattattatgtttttgagacagagtctcactctgtcacccagactggagtgcagtggcgtgatctcagctcactgcaacctccaccttctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41957211 282 + 159171411 gtgtcacgtgatacttcatcctgttaggctgaggccctcttcatgtttttattggtcttttcttcacatttcctcttctgtgaagggctggttcaactcttttgcccagattctgtttagttgtctgaatttttgc-----------------cttattattat-tatttgagatggagttgccctctgtcacccaggctggagtacagtggtacgatcttggctcactgccacctccatcttccgggttcaagcgattctcctgccttagcttccagagttgctgggattaaaggcatg i calJac3.chr5 C 0 C 0 e panPan2.chr3 506530 23 - 205426864 I e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6179140 4059 + 6207128 I e chlSab2.chr4 89572516 1704 - 91010382 I e cerAty1.NW_012009470v1 16223650 971 + 16742782 I e rheMac8.chr6 266717 972 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=136956.000000 s hg38.chr3_KI270779v1_alt 23872 124 + 205312 caccaccacgcccaactaatttttatatgtttactacagatggggtttcaccatgttgtccaggctggtctgaaactcctgacctcaggtgattctcccacctcagcctcccaaagtgctggga s panTro5.chr3 200016855 124 + 202621043 caccaccacgcccagctaatttttatatgtttactacagatggggtttcaccatgttgtccaggctggtctgaaactcctgacctcaggtgattctcccacctcagcctcccaaagtgctggga i panTro5.chr3 C 0 C 0 s panPan2.chr3 506553 122 - 205426864 caccaccacgcccagctaa-ttttatatg-ttactacagatggggtttcaccatgttttccaggctggtctgaaactcctgacctcaggtgattctcccccctcagcctcccaaaatgctggga i panPan2.chr3 I 23 C 0 s gorGor5.CYUI01015759v1 848220 124 - 880730 caccaccacgcccagctaatttttatatgtttactacagatggggtttcaccatgttgtccaggctggtctgaaactcctgacctcaggtgattctcccacctcagcctcccaaagtgctggga i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 851267 124 + 1687011 caccataacacccagctaatgtttgtatttttactagagatggggttctaccatgttgtccaggctggtctgaaactcctgacctcaggtgattctcctgcctcagcctcccaaagtgctggga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41957493 115 + 159171411 tgccaccatgtccagctattttttgtatgtttagtagagacgggatttcaccatgttgaccaggctg---------ccttgacctcaggtgacctgcctgccttggcttcccaaagtgcttgga i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6179140 4059 + 6207128 I e chlSab2.chr4 89572516 1704 - 91010382 I e cerAty1.NW_012009470v1 16223650 971 + 16742782 I e rheMac8.chr6 266717 972 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2730.000000 s hg38.chr3_KI270779v1_alt 23996 3 + 205312 tta s panTro5.chr3 200016979 3 + 202621043 tta i panTro5.chr3 C 0 C 0 s panPan2.chr3 506675 3 - 205426864 tta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 848344 3 - 880730 tta i gorGor5.CYUI01015759v1 C 0 C 0 s colAng1.NW_012116910v1 851391 3 + 1687011 tta i colAng1.NW_012116910v1 C 0 I 6 e macNem1.NW_012013899v1 86100 552 - 100774 M e calJac3.chr5 41957608 0 + 159171411 C e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6179140 4059 + 6207128 I e chlSab2.chr4 89572516 1704 - 91010382 I e cerAty1.NW_012009470v1 16223650 971 + 16742782 I e rheMac8.chr6 266717 972 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=546865.000000 s hg38.chr3_KI270779v1_alt 23999 1009 + 205312 tgtgggtggcaagccacccaggcaccgaggcaagagacagaggacacgagctgttccagtataataaaatataaaacaagaatagttataccagatatagatcttagatatgattatatatgaatatcattaatcattagtttgtagcaattactttttattccaatattatgataatccttgctctataatcgtagcctaggaaaaaccaggccatacagagataggagctgaggggacat-agtgaggtgtgaccagaagacaagagtgcgagccttctgttatgcccggaccgggccaccagagggctccttggtctagcggtgatgccagcgtctgggaagatgcctgttaccaggcgga--------------tagcaaaaggtgtcaaggaacaacacccgatacttagcagaccgggaaagggcgg-gga-ggggggggggtctccctttccccgggggagtttagagaagactctgctcctccacctcttgtggagggcctgacatcagtcaggctcgcctgcagttatccggaggcctaaccgtctccctgtgatgctgtgcttcagtggtcacgctcctagtccgccttcatgtttcatcctgtacacctggctctgccttctagatagcagtagtaaattagtaaaaatactaatagtccctgatatgcggaaataatggcataagctgtctttctctctgtctcctctccctctctgcctcggctgccaggcagggaagggccccctgtccagtggacacgtgacccacgtgaccttacctatcattgcaggtgactcacattctttaccctgccccttctgccttgtatccaataaataacagcgcagccagacattcggggcactaccgttctccgcgcattggtggtagtggccccccgggcccagctgccctttctcttatctctttgtcttgtgtctttatttctacactctctcgtcgccgcacacagggagagacccaccgaccctgtgggg-ctggtccctgcaGGG s panTro5.chr3 200016982 1012 + 202621043 tgtgggtggcaagccacccaggcaccgaggcaagagacagaggacacgagctgttccagtataataaaatataaaacaagaatagttataccagatatagatcttagatatgattacatatgaatatcattaatcattagtttgtagcaattactttttattccaatattatgataatccttgctctataatcatagcctaggaaaaaccaggccatacagagataggagctgaggggacataagtgaggtgtgaccagaagacaagagtgcgagccttctgttgtgcccggaccgggccaccagagggctccttggtctagcggtgatgccagcatctgggaagatgcctgttaccaggcgga--------------tagcaaaaggtgtcaaggaacaacacccgatacttagcagaccgggaaagggcggaggagggggggggggtctccctttccccgggggagtttagagaagactctgctcctccacctcttgtggagggcctgacatcaggcaggctcacctgcagttatccggaggcgtaaccgtctccctgtgatgctgtgcttcagtggtcacgctcctagtccgccttcatgtttcatcctgtacacctggctctgccttctagataacagtagtaaattagtaaaaatactaatagtccctgatatgcggaaataatggcataagctgtctttctctctgtctcctctccctctctgcctcggctgccaggcagggaagggccccctgtccagtggacacgtgacccacgtgaccttacttatcattggaggtgactcacattctttaccctgccccttctgccttgtatccaataaataacagcgcagccagacattcggggcactaccgttctccgcgcattagtggtagtggttccccgggcccagctgccctttctcttatctctttgtcttgtgtctttatttctacactctctcgtcgccgcacacagggagagacccaccgaccctgtgggg-ctggtccctgcaGGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 506678 1017 - 205426864 tgcgggtggcaagccacccaggcaccgaggcaagagacagaggacacgagctgttccagtataataaaatataaaacaagaatagttatgccagatatagatcttagatatgattatatatgaatatcattaatcattagtttgtagcaattactttttattccaatattatgataatcctcgctctataatcatagcctaggagaaaccaggccatacagagataggagctgaggggacat-agtgaggtgtgaccagaagacaagagtgcgagccttctgttatgcccggaccgggccaccagagggctccttggtctagcggtgatgccagcgtctgggaagacgcccgttaccaggcagatcgtggtccagcggtagcaaaaggtgtcaaggaacaacacccaatacttagcagactgggaaagggtgg--------gggggtgtctttctttccccaggggagtttagagaagactctgctcctccacctcttgtggagggcctgacatcagtcaggctcacctgcagttatctggaggcctaaccgtctccctgtgatgctgtgcttcagtggtcacactcctagtccgccttcatgtttcatcctgtacacctggctctgccttctagatagcagtagtaaattagtaaaaatactaatagtccctgatatgcggaaataatggcataagctgtctttctctctgtctcctctccctctctgcctcggctgccaggcagggaagggccccctgtccagtggacacgtgacccacgtgaccttacctatcattggaggtgactcacattctttaccctgccccttctgccttgtatccaataaataacagcgcagcgagacattcggggcactaccggtctccgcgcattggtggtagtggtcccccgggcccagctgccctttctcttatctctttgtcttgtgtctttatttctacactctctcgtcgccgcacacagggagagacccaccgaccctgtgggg-ttggtccctgcaggg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 848347 1021 - 880730 tgtgggtggcaagccacccaggcaccgaggcaagagacagaggacacgagctgttccagtataataaaatataaaagaagaatagttataccagatatagatcttagatatgattatatatgaatatcattaatcattagtttgtagcaattactttttattccaatattatgataatccttgctctataatcatagcctaggaaaaaccaggccatacagagataggagctgaggggacat-agtgaggtgtgaccagaagacaagagtgcgagccttctgttatgcccggaccgggccaccagagggctccttggtctagcggtgatgccagcatctgggaagacgcccgttaccaggcggatcgtggtccagcggtagcaaaaggtgtcgaggaacaacacccgatacttagcagaccgggaaagggcgg----gggggggggggtctccctttccccgggggagtttagagaagactctgctcctccacctcttgtggagggcctgacatcagtcaggctcgcctgcagttatccggaggcctaaccgtctctctgtgatgctgtgcttcagtggtcacactcctagtccgccttcatgtttcatcgtgtacacctggctctgccttctagacagcagtggtaaattagtaaaaatactaatagtccctgatatgcagaaataatggcataagctgtctttctctctgtctcctctccctctctgccttggctgccaggcagggaagggccccctgtccagtggacacgtgacccacgtgaccttacctatcattggaggtgactcacattctttaccctgtcccttctgccttgtatccaataaataacagcgcagccagacattcggggcactaccggt-tccgcgcattggtggtagtggttccccaggcccagctgccctttctcttatctctttgtcttgtgtctttatttctacactctctcgtcgccgcacacagggagagacccaccgaccctgtggggtctggtccctgcaGGG i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e calJac3.chr5 41957608 0 + 159171411 C e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 851394 6 + 1687011 I e manLeu1.NW_012109696v1 6179140 4059 + 6207128 I e chlSab2.chr4 89572516 1704 - 91010382 I e cerAty1.NW_012009470v1 16223650 971 + 16742782 I e rheMac8.chr6 266717 972 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=6924.000000 s hg38.chr3_KI270779v1_alt 25008 9 + 205312 TTATAGGCA s panTro5.chr3 200017994 9 + 202621043 TTATAGGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 507695 9 - 205426864 ttataggca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849368 9 - 880730 TTATAGGCA i gorGor5.CYUI01015759v1 C 0 C 0 s calJac3.chr5 41957608 9 + 159171411 ttacagata i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 851394 6 + 1687011 I e manLeu1.NW_012109696v1 6179140 4059 + 6207128 I e chlSab2.chr4 89572516 1704 - 91010382 I e cerAty1.NW_012009470v1 16223650 971 + 16742782 I e rheMac8.chr6 266717 972 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=662131.000000 s hg38.chr3_KI270779v1_alt 25017 189 + 205312 TGAGCCACCA---TGCCCGGCCTGCTTTTTTCTTTTTCAAAAGGACTCTTTCTAGATTATACCTATTCATTCCGGTGACTATATGTGGGGCAAAGATGGGTTTGAATCCACCAGGATAAACGTGCCGGATCTCCTCT--CTGATGGAAGAAgagac----agggatagaagggtgcagagaatcagagccaagaggag s panTro5.chr3 200018003 189 + 202621043 TGAGCCACCA---TGCCCGGCCTGCTTTTTTCTTTTTCAAAAGGACTCTTTCTAGATTATACCTATTCATTCTGGTGACTATATGTGGGGCAAAGATGGGTTTGAATCCACCAGGATAAACGTGCCGGATCTCCTCT--CTGATGGAAGAAGAGAC----agggatagaagggtacagagaatcagagccaagaggag i panTro5.chr3 C 0 C 0 s panPan2.chr3 507704 186 - 205426864 tgagccacca---tgcccggccTGCTTTT---CTTTTCAAAAGGACTCTTTCTAGATTATACCGATTCATTCCGGTGACTATATGTGGGGCAAAGATGGGTTTGAATCCACCAGGATAAACGTGCCGGATCTCCTCT--CTGATGGAAGAAgagac----agggatagaagggtacagagaatcagagccaagaggag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849377 189 - 880730 TGAGCCACCA---TGCCCGGCCTGCTTTTTTCTTTTTCAAAAGGACTCTTTCTAGATTATACCTATTCATTCTGATGACTATATGTGGGGCAAAGATGGGTTTGAGTCCACCAGGATAAACGTGCCGGATCTCCTCT--Ctgatggaagaagagac----agggataggagggtacagagaatcagagccaagaggag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 267689 193 + 180051392 tgagccacca---tgtccagcctgcctttttctttttcaaaaggactctttatagattatacctattgattctggtgactatctgtgtggcaaacatGGGTTTGAATCCACCAGGATGAACATGGAGGATCTCCTCT--CTGGTGGCAGAAgagacagagagggataggaggggagagagaatcagagccaagaagag i rheMac8.chr6 I 972 C 0 s cerAty1.NW_012009470v1 16224621 193 + 16742782 tgagccacca---tgtccagcctgcctttttctttttcaaaaggactctttatagattctacctattcattccggtgactatctgtgtggcaagcatGGGTTTGAATCCACCAGGATGAACATGGAGGATCTCCTCT--CTGGTGGCAGAAGAGACAGAAAGGGATAGGAGGGGAGGGAGAATCAGAGCCAAGAGGAG i cerAty1.NW_012009470v1 I 971 N 0 s chlSab2.chr4 89574220 193 - 91010382 tgagccacca---tgtccagcctgcctttttctttttcaaaaggactctttatagattaTACCTATTCATTCCGGTGACTATCTGTGTGGCAAACATGGGTTTGAATCCACCAGGATGAACATGGAGGATCTCCTCT--CTGGTGGCAGAAgagacagaaagggataggaggggagggagaatcagagccaagaggag i chlSab2.chr4 I 1704 C 0 s manLeu1.NW_012109696v1 6183199 193 + 6207128 tgagccacta---tgtccagccTGCCTTTTTCTTTTTCAAAAGGACTCTTTATAGATTATACCTATTCATTCCGGTGACTACCTGTGTGGCAAGCATGGGTTTGAATCCACCAGGATGAACATGGAGGATCTCCTCT--CTGGTGGCAGAAgagacagaaagggataggaggggagggagaatcagagccaagaggag i manLeu1.NW_012109696v1 I 4059 C 0 s colAng1.NW_012116910v1 851400 193 + 1687011 tgagccacca---tgcctggccTGCCTTTTTCTTTTTCAAAAGGACTCTTTATAGATTATACCTGTTCATTCCGGTGACTATCTGTGTGGCAAAGATAGGTTTCAATCCACCAGGATGCACGTGGAGGATCTCCTCT--CTGGTGGCAGAAgagacagaaagggatagaagggaagggagaatcagagacgagaggag i colAng1.NW_012116910v1 I 6 C 0 s calJac3.chr5 41957617 198 + 159171411 tgagccaccaccgtgcctggcctgcctttttctttttcaagaggactctttatagatGATGCCCATTCATTTTAGTGACTATCTGTGTGGCAAAGATGGGTTTGAATCCACTAGAATGAACCTTCAGGATCTCCTCTgcgtggtgggagaagagacagagaggggtagatgggcatggagaatcagaggcgagaggag i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=170143.000000 s hg38.chr3_KI270779v1_alt 25206 55 + 205312 gccgagtcaggcgggggttgcaggctgctgtgaggacttggctgcttctctgagt s panTro5.chr3 200018192 55 + 202621043 gccgagtcaggcgggggttgcaggctgctgtgaggacttggctgcttctctgaga i panTro5.chr3 C 0 C 0 s panPan2.chr3 507890 55 - 205426864 gccgagtcaggcgggggttgcaggctgctgtgaggacttggctgcttctccgaga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849566 55 - 880730 gccgagtcaggcgggggttgcaggctgctgtgaggacttggctgcttctctgaga i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 267882 55 + 180051392 gctgagtcaggtgggggttgcaggctgctgtgaggacttggctgcttctctgagt i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89574413 55 - 91010382 gctgagtcaggtgggtgttgcaggctgctgtgaggacttggctgcttctctgagt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6183392 55 + 6207128 gctgagtcaggtgggggttgcaggctgctgtgaggacttggctgcttctctgagt i manLeu1.NW_012109696v1 C 0 I 6431 s colAng1.NW_012116910v1 851593 55 + 1687011 gccgaggcaggcgggggttgcaggctgctgtgaggacttggcttcttctctgagt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41957815 55 + 159171411 gccgagtcaggcgggggtcgcaggcagccgtgaggacttggctcctcctctgagc i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=194477.000000 s hg38.chr3_KI270779v1_alt 25261 83 + 205312 ctggtgggattagcagggga-tttaaacagaggaaccgtgggatctcccttatgcattTCTGCCATGGTTGGCTCAGCTGAACA s panTro5.chr3 200018247 83 + 202621043 ctggtgggattagcagggga-tttaaacagaggaaccatgggatctcccttatgCATTTCTGCCATGGTTGGCTCAGCTGAACG i panTro5.chr3 C 0 C 0 s panPan2.chr3 507945 83 - 205426864 ctggtgggattagcagggga-tttaaacagaggaaccatgggatctcccttatgCATTTCTGCCATGGTTGGCTCAGCTGAACG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849621 83 - 880730 ctggtgggattagcagggga-tttaaacagaggaaccatgggatctcccttatgCATTTCTGCCATGGTTGGCTCAGCTGAACG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 267937 82 + 180051392 -cggtgggattagcagggga-tttaaacagaggaaccatgggatttcccctgtgcattTCTGCCATGGTTGGCTCAGCTGAACG i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89574468 83 - 91010382 cgggtgggattagcagggga-tttaaacagaggaACCGTGGGATTTCCCCTGTGCATTTCTGCCATTGTTGGCTCAGCTGAACA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 851648 83 + 1687011 cgggtgggattagcagggga-tttaaacagaggaaccatgggatttCCCGTGTGCATTTCTGCCATGGTTGGCTCAGCTGAACG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41957870 84 + 159171411 caggtgggattagcaggggattttaatcagagcagccatggggtctccctcgtgtattTCTGCTATGGTTGGCTCAGCTGAACT i calJac3.chr5 C 0 C 0 e macNem1.NW_012013899v1 86100 552 - 100774 M e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6183447 6431 + 6207128 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=429583.000000 s hg38.chr3_KI270779v1_alt 25344 149 + 205312 CACCTCTTGAGCAAGACTTGGTCTTGGACACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCGTGGCCACTGACACATCCACGTTTGTCTCCCACACGGCTGGGCGGCCCCGAGACCTGCTGTGCGTGCCCTTCTCATTGGTGGCA s panTro5.chr3 200018330 149 + 202621043 CACCTCTTGAGCAAGACTTGGTCTTGGATACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCGTGGCCACTGACACATCCACGTTTGGCTCCCACACGGCTGGGCGGCCCCAAGACCTGCTGCGCCTGCCCTTCTCATTGGTGGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 508028 149 - 205426864 CACCTCTTGGGCAAGACTTGGTCTTGGACACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCGTGGCCACTGACACATCCACGTTTGGCTCCCACACGGCTGGGCGGCCCCGAGACCTGCTGTGCCTGCCCTTCTCATTGGTGGCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849704 148 - 880730 CACCTCTTGAGCAAGACTTGGTCTTGGACACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCGTGGCCACTGACACATCCACGTTTGGCT-CCACACAGCTGGGCGGCCCCGAGACTTGCTGTGCCTACACTTCTCATTGGTGGCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268019 149 + 180051392 CACCTCTTGAACAAGACTTGGCCGTGGACACCCAGAGGCCCTTGGGTGAGGGTTTACCTCCTGGCATGGCCACTGACACATCCACGTTTGGCGCCCACACGACTGGGCGGCCCCGAGACCTGCTCTGCCTGGGCTTCCCCTTGGTGGCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 86652 149 - 100774 CACCTCTTGAACAAGACTTGGCCGTGGACACCCAGAGGCCCTTGGGTGAGGGTTTACCTCCTGGCATGGCCACTGACACATCCACGTTTGGCGCCCACACGACTGGGCGGCCCCGAGACCTGCTCTGCCTGGGCTTCCCTTTGGTGGCG i macNem1.NW_012013899v1 M 552 C 0 s chlSab2.chr4 89574551 149 - 91010382 CACCTCTTGAACAAGACTTGGCCTTGGACACCCAGAGGCCCTTGGGTGAGGGTTTACCTCCTGACCTGGCCACTGACACATCCACGTTTGGCGCCCACACGACTGGGCGGCCCCAAGACCTGCTCTGCCTGGGCTTCCCCTTGGTGGCA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 851731 149 + 1687011 CACCTCTTGAACAAGACTTGGCCTTGGACACCCAGAGGCCCTTGGGCAAGCGTTTACCTCCTGGCCTGGCCACTGACACATCCACGTTTGGCGCCCACATGACTGGGCGGCCCCGAGACCTGCTCTGCCTGGGCTTCCCCTTGGTGGCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41957954 149 + 159171411 CACCTCTTCAACAAGACTTGGCCTTGTCCATCCAGAGGCCCGTGGCGGAGGGCTTAACTCCTGGCATGGCCACTGACACATCCACGTTTGGCGCACACATGGCTGGGCAGCCCCAAGACCGGCTCTGCCTGGGCCTCTCGTTGGCAGCA i calJac3.chr5 C 0 C 0 e saiBol1.JH378155 147144 48915 - 16417988 T e manLeu1.NW_012109696v1 6183447 6431 + 6207128 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=134539.000000 s hg38.chr3_KI270779v1_alt 25493 35 + 205312 TTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT s panTro5.chr3 200018479 35 + 202621043 TTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 508177 35 - 205426864 TTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849852 35 - 880730 TTTCTCACGTTTGTCCCCTCTCAAGTCTGCCCCAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268168 35 + 180051392 TTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 86801 35 - 100774 TTTCTCAGGTTTGTCCCCTCCCAAGTCTGCCCCAT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89574700 35 - 91010382 TTTCTCACGTTTGTCCCCTCTCAAGTCTGCCCCAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6189878 35 + 6207128 TTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT i manLeu1.NW_012109696v1 I 6431 C 0 s colAng1.NW_012116910v1 851880 35 + 1687011 TTTCTCAAGTTTGTCTCCTCTCAAGTCTGCCCCAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr5 41958103 35 + 159171411 TTTCTGGCGTTTGTCCCTTCCCAAGTCTGGCCTAT i calJac3.chr5 C 0 n 0 e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=169544.000000 s hg38.chr3_KI270779v1_alt 25528 65 + 205312 CCGGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCCGTCAGCACCTCCTCCTGACTCAC-A s panTro5.chr3 200018514 65 + 202621043 CCGGAAAACCAAACATCTCTCTCTCCTACATGGAAACCCCCGTCAGCACCTCCTCCTGACTCAC-A i panTro5.chr3 C 0 C 0 s panPan2.chr3 508212 65 - 205426864 CCGGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCCGTCAGCACCTCCTCCTGACTCAC-A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849887 65 - 880730 CCGGAAAACTAAACACCTCTCTCTCCTACGTGGAAACCCCCGTCAGCACCTCCTCCTGACTCAC-A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268203 61 + 180051392 CCGGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCCGTCAGAACCT---CCCAACTCAC-- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 86836 61 - 100774 CCGGAAAACCAAACACCTCTCTTTCCTACATGGAAACCCCCGTCAGAACCT---CCCAACTCAC-- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89574735 62 - 91010382 CCAGAAAACCAAACACCTCTCTCTCCTACATGGAAA-CCCCGTCAGAACCTC--CCCGACTCACA- i chlSab2.chr4 C 0 I 131 s manLeu1.NW_012109696v1 6189913 61 + 6207128 CCGGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCCGTCAGAACCT---CCCAACTCAC-- i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 851915 62 + 1687011 CCAGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCTGTCAGCACCTC--CCCGACTCAC-- i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=600.000000 s hg38.chr3_KI270779v1_alt 25593 1 + 205312 G s panTro5.chr3 200018579 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 508277 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849952 1 - 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 e macNem1.NW_012013899v1 86897 0 - 100774 C e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 851977 0 + 1687011 C e manLeu1.NW_012109696v1 6189974 0 + 6207128 C e chlSab2.chr4 89574797 131 - 91010382 I e rheMac8.chr6 268264 0 + 180051392 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=153904.000000 s hg38.chr3_KI270779v1_alt 25594 49 + 205312 GGCATCCCGTCAACATCACAGTCCCAACCTTCCCACATGGAGAAGCTCA s panTro5.chr3 200018580 49 + 202621043 GGCATCCCGTCAACATCACAGTCCCAACCTTCCCACACGGACAAGCTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 508278 49 - 205426864 GGCATCCCGTCAACATCACAGTCCCAACCTTCCCACACGGACAAGCTCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 849953 49 - 880730 GGCATCCCGTCAGCATCACAGTCCCAATCTTCCCACACGGACAAGCTCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268264 49 + 180051392 GGCATCCCGTCAACATCACAGTCCCGACTTTCCCACACGGACAAGCCCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 86897 49 - 100774 GGCATCCCGTCAACATCACAGTCCTGACTTTCCCACACGGACAAGCTCA i macNem1.NW_012013899v1 C 0 T 69845 s chlSab2.chr4 89574928 49 - 91010382 GGCATCCCGTCAACATCACAGTCCCGACTTTCCCGCACGGAGAAGCCCA i chlSab2.chr4 I 131 C 0 s manLeu1.NW_012109696v1 6189974 49 + 6207128 GGCATCCCGTCAACATCACAGTCCCGACTTTCCCACACGGACAAGCCCA i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 851977 49 + 1687011 GGCATCCCGTCAACATCACAGTCCCGACTTTCCCACACGGACAAGCCCA i colAng1.NW_012116910v1 C 0 C 0 e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=456887.000000 s hg38.chr3_KI270779v1_alt 25643 284 + 205312 TGGGACCCCC-GATGGACCAGGACAGTGCCAGCACTAAGACGTGCCCTGAAACTCACAGGAAGAGCGGACCAAGAAGCCGGGAACAGCACGGGGCACTGGGAGCTGCAAACGCCCACGATACTGTGAGAGACGGAGAAAGGTATGACAGGAGGAGCAGACCAAGAAGACGGGAACAGCACGGCGCACTGGGAGCTGCAAATGCCCACGATACCGTGAGAGATGGAGAAAGGTATGGCCATGGCGGTCacaaaatgttcctcaacatttattaaaggcctaaatgg s panTro5.chr3 200018629 285 + 202621043 TGGGACCCCCTGATGGACCAGGACAGCGCCAGCACTAAGACGTGCCCTGGAACTCACAGGAAGAGCGGACCAAGAAGCCGGGAACAGCACGGGGCACTGGGAGCTGCAAACGCCCACGATACTGTGAGAGATGGAGCAAGGTATGACAGGAGGAGCAGACCAAGAAGACAGGAACAGCACGGCGCACTGGGAGCTGCAAATGCCCATGATACCGTAAGAGATGGAGAAAGGTATGGCCATGGCGGacacaaaatgttactcaacatttattaaaggcctaaatgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 508327 285 - 205426864 TGGGACCCCCTGATGGACCAGGACAGCGCCAGCACTAAGACGTGCCCTGGAACTCACAGGAAGAGCGGACCAAGAAGCCGGGAACAGCACGGGGCACTGGGAGCTGCAAACGCCCACGATACTGTGAGAGATGGAGCAAGGTATGACAGGAGGAGCAGACCAAGAAGACAGGAACAGCACGGCGCACTGGGAGCTGCAAATGCCCATGATACCGTAAGAGATGGAGAAAGGTATGGCCATGGCGGacacaaaatgttactcaacatttattaaaggcctaaatgg i panPan2.chr3 C 0 N 0 s gorGor5.CYUI01015759v1 850002 285 - 880730 TGGGACCCCCTGATGGACCAGGACAGCGCCAGCACTAAGACGTGCCCTGGAACTCACAGGAAGAGCGGACCAAGAAGCCGGGAATAGCACGGGGCACTGGGAGCTGCAAACGCCCACGATACCGTGAGAGATGGAGAAAGGTATGACAGGAGGAGCGGACCAAGAAGACGGGAACAGCACGGCGCACTGGGAGCTGCAAATGCCCACGATACCGTGAGAGATGGAGAAAGGTATGGCCATGGCGGacacaaaatgttactcaacatttattaacggcctaaatgg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268313 195 + 180051392 TGGGACCCCCTGATGGGCCAGGACAGCGTCAGCACTAAGACACGCCCTGAAACTCACAGAAAGAGCGGACCAAGAAGACGGGAACTGCACAGGGCACTGGGAGCTGCAAACACCCAAGATACTGTCAGAGAC------------------------------------------------------------------------------------------GGAAAAAGGTATGGCCGTGGCTGAcacaaaatgttactcaacatttatcacaggcctaaatgg i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89574977 195 - 91010382 TGGGACCCCCTGATGGACCAGGACAGCGTCAGCACTAAGACACGCCCTGAAACTCACAGAAAGAGCGGACCAAGAAGACGGGAACTGCACGGGGCACTGAGAGCTGCAAACACCCAAGATACTGTCAGAGAC------------------------------------------------------------------------------------------GGAAAAAGGTATGGCCGTGGctgacacaaaatgttactcaacatttatcacaggcctaaatgg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012109696v1 6190023 195 + 6207128 TGGGACCCCCTGATGGGCCAGGACAGCGTCAGTACTAAGACATGCCCTGAAACTCACAGAAAGAGTGGACCAAGAAGACGGGAACTGCACAGGGCACTGAGAGCTGCAAACACCCAAGATACTGTCAGAGAC------------------------------------------------------------------------------------------GGAAAAAGGTATGGCCGTGGCTGAcacaaaatgttactcaacatttatcacaggcctaaatgg i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 852026 195 + 1687011 TGGGACCCCCTGATGGACCAGGACAGCGTCAGCACTAACACACGCCCTGAAACTCACAGAAAGAGCGGACCAAGAAGACAGGAACTGCCTGGGGCACGGGGAGCTGCAAACACCCAAGATACTGTCAGAGAC------------------------------------------------------------------------------------------GGAAAAAGGTATGGCCATGGctgacacaaaatgtcactcaacatttatcacaggccgaaatgg i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=603937.000000 s hg38.chr3_KI270779v1_alt 25927 274 + 205312 agaacataacgctatcaaacccttagctaaaaacacaggggaaaattcgtatggcctggggttaggcgaaaagttcttagacatgacaccaaaagcatgattcat--aagattgacaaattaaatttagtcataaatttaaaattataattctataaagcaatataaaaatccaaagagaatgaaacat-gaactatggtctag-aaataaacatttgtgaatcacacgtctcacaacctactggcacgcaggatatatgaagaaccatcaaaactta s panTro5.chr3 200018914 274 + 202621043 agaacataacgctatcaaacccttaggtaaaaacacaggggaaaatttgtatggcctggggttaggcgaaaagttcttagacatgacagcaaaagcatgattcataaaagattgacaaattaaatgtagtcataaatttaaaattataattctataaagcaatataaaaat--aaagagaatgaaacac-aaactatggtctag-aaaaaaacatttgtgaatcacacatctcacaacctactggcatgcagaatatatgaagaaccatcaaaactta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 0 271 + 190779 agaacataacgctatcaaacccttaggtaaaaacacaggggaaaatttgtatggcctggggttaggcgaaaagttcttagacatgacagcaaaagcatgattcataaaagattgacaaattaaat---gtcataaatttaaaattataattctataaagcaatataaaaat--aaagagaatgaaacac-aaactatggtctag-aaaaaaacatttgtgaatcacacatctcacaacctactggcatgcagaatatatgaagaaccatcaaaactta i panPan2.chrUn_NW_014024201v1 N 0 C 0 s gorGor5.CYUI01015759v1 850287 275 - 880730 agaacataacgctatcaaacccttaggtaaaaacac-ggggaaaacttgtatggcctggggttaggcgaaaagttcttagacatgacaccaaaagcatgattcataaaagactgacaagttaaatgtagtcataaatttaaaattataattctataaagcaatataaaaatctaaagagaatgaaacac-aaactatggtctag-aaaaaaatatgtgtgaatcacacatctcacaacgtactggcacgcagaatatatgaagaagcatcaaagctga i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268508 276 + 180051392 agaacacaacactataaaaccattagataaaaacacaggggaaaatttgtatggcctggggttaggtgaaaagttcttagacatgacaccaaaggcatgattcatagaagattgacaaattaaatttagtcat-aacttaaaattataattctataaagcaatataaaaatcttaaaagaatgaaatgc-aaactatgggctagaaaaaaaatactggttaatcacacatctcacaatgtactggcacgcagaatatacgaagaaccgtcaaaactta i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89575172 275 - 91010382 agaacataacactataaaaccattagataaaaacacaggggaaaatttgtatggcctggggttaggtgaaaagttcttagacatgacaccaaaggcatgattcatagaagattgacaaattaaatttagtcat-aatttaaaattataattctataaagcaatataaaaatcttaaaagaatgaaatgc-aaactatgggctag-aaaaaaatattggttaatcacacatctcacaatgtactggcacgcagaatatacgaagaaccgtcaaaactta i chlSab2.chr4 C 0 I 16 s manLeu1.NW_012109696v1 6190218 274 + 6207128 agaacataacactataaaaccattagataaaaacacaggggaaaatttgtatggcctggggttaggtgaaaagttcttagacatgacaccaaaggcatgattcatagaagattgacaaattaaatttagtcat-aatttaaaattataattctataaagcaatgtaaaaatctt-aacgaatgaaatgc-aaactatgggctag-aaaaaaatattggttaatcacacatctcacaatgtactggcacgcagaatatacgaagaactgtcaaaactta i manLeu1.NW_012109696v1 C 0 C 0 s colAng1.NW_012116910v1 852221 275 + 1687011 agaacagaacgctataaaaccattagataaaaacac--gggaaaatttgtatggcctggggttaggtgaaaagttcttagacatgacaccaaaggcatgattcatagaagattgacagattaaatttagtcataaatttaaaattataattctataaagcaatataaaaatcttaaaagaatgaaatgcaaaactatgggctag-aaaaaaatattggtgaatcacacatctcacaacgtactggcatgcagaatatacgaagaactgtcaaaactta i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1072186.000000 s hg38.chr3_KI270779v1_alt 26201 601 + 205312 accataagaaagtaaaaaccccagtattaaagagagggccaatattggaacggaggcctcatcaaagaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcagcagtacctctgcaaatccattaaaatggctaaaaacagacaaaacccatgggccaacccaggttctagtgatgatgcagaggaactgggaccctcataagctgcagtgggaatgggaggggtcccgccatgctggaaagtggtcctggagtttcttacgaagttaagcacatccttaccatgtcatccagcaaccccactgctgaaatgtcccccaagggaaaacttaaacgtgcacacacaaacctgcacacaagtgtttaggcctcattcctcattgccaataactggaagaaaacaaaatgtccgtcggcaggagcaggagaaggcgtgaactaacgcggatgcttccacacagggggcaccaaccagcagtggaaagatgcaccc-aaatgccccaggtctcccaggctacatgcccgttgaaggaagctagtttcggtgggcacaggccaaaggatgc s panTro5.chr3 200019188 601 + 202621043 accataagaaagtaaaaaccccagtattaaagagagggccaatattggaatggaggcctcatcaaagaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcagcagtacctctgcaaatccattaaaatggctaaaaacagacaaaacccatgggccaacccaggttctagtgacgatgcagaggaactgggaccctcataagctgcagtgggaatgggaggggtcccgccatgctggaaagtggtcctggagtttcttacgaagttaggcacatccttaccatgtcatccagcaaccccactcctgaaatgtcccccaagcgaaaacttaaacgtgcacacacaaacctgcacacaagtgtttaggcctcattcctcattgccaataactggaagaaaacaaaatgtccgtcggcaggagctggagaaggtgtgaaccaacgcggatgcatccacatagggggcaccaaccagcagtggaaagatgcaccc-aaatgcgccaggtctcccaggctacatgcccggtgaaggaagctagtttcggtgggcacaggccaaaggatgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 271 601 + 190779 accataagaaagtaaaaaccccagtattaaagagagggccaatattggaatggaggcctcatcaaagaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcagcagtacctctgcaaatccattaaaatggctaaaaacagacaaaacccatgggccaacccaggttctagtgacgatgcagaggaactgggaccctcataagctgcagtgggaatgggaggggtcccgccatgctggaaagtggtcctggagtttcttacgaagttaagcacatccttaccacgtcatccagtaaccgcactcctgaaatgtcccccaagcgaaaacttaaatgtgcacacacaaacctgcacacaagtgtttaggcctcattcctcattgccaataactggaagaaaacaaaatgtccgtcggcaggagcaggagaaggcgtgaaccaatgcggatgcgtccacatagggggcaccaaccagcagtggaaagatgcaccc-aaatgcgccaggtctcccaggctacatgcccgttgaaggaagctagtttcggtgggcacaggccaaaggatgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 850562 600 - 880730 accataggaaagtaaaaaccccagtagtaaagagagggcaaatatttgaatggaggcctcatcaaagaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcaacagtacctctgcaaatctattaaaatggct-aaaacagacaaaaaccatgggccaacccaggttctagtgatgatgcagaggaactgggaccctcataagctgcagtgggaatgggaggggtcccgccatgctggaaagtggtccgggagtttcttacgaagttaagcacatccttaccatgtcatccagcaaccccactcctgaaatgtcccccaagcgaaaacttaaacgtgcacacacaaacctgcacacaagtgtttaggcctcattcctcattgccaataactggaagaaaacaaaatgtccatcggcaggagcaggagagggcgtgaagcaacgcggatgcttccacatgggggacaccaaccagcagtggaaagatgcaccc-aaatgcgccaggtctcccaggctacatgcccggtgaaggaagctagtttcggtgggcacaggccgaaggatgc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 268784 596 + 180051392 accataagaaagtaaaagccccagtattaaagagaaggcaaatattttaatggagccctcatcaaggaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcaacagtagctctgcaaatctattaaaatggctaaaaacagacaaaaaccacgggccaacccagcttctagtgacgatgcagaggaaccgggaccctcataagcggcagtgggaatgggagggatcccgccatgctggaacgtggtccgggagtttcttattgagttaagcacatccttaccacgtcatccagcaaccccactcctgaaatttcccccaagagaaaacttaaacgtgcacacacaaacctgcactcaagtgtttaggcctcattgctcattgccaataactggaagaaaacaaattgtccatcggca------ggagaaggcgtgaaccaacgcggatgcttccacacagggggcaccaaccagcagtggaaacatgcacccaaaatgccccaggtctcccaggccacatgcctggtgaagaaagctagtttcagtgggcacaggccgaaggatgc i rheMac8.chr6 C 0 C 0 s manLeu1.NW_012109696v1 6190492 594 + 6207128 accataagaaagtaaaacccccagtattaaagagaaggcaaatattttaatggagccctcatcaaggaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcaacagtacctctgcaaatctattaaaatggctaaaaacagacaaaaaccacgggccaacccagcttctagtgatgatgcagaggaactgggaccctcataagcggcagtgggaatgggagggatcccgtcatgctggaacgtggtccgggagtttcttattgagttaagcacatccttaccacgtcatccagcaaccccactcctgaaatttcccccaagagaacacctaaacgtgcacacacaaacctgcactcaagtgtttaggcctcattgctcattgccaataactggaagaaaac--attgtccattggca------ggagaaggcgtgaaccaacgcggatgcttccacacagggggcaccaaccagcagtggaaaCATGCACCCAAAATGCCCCAGGTCTCCTAGGCCACATGCCTGGTGAAGAAAGCTAGTTTTGGTGGGCACAGGCCGAAGGATGC i manLeu1.NW_012109696v1 C 0 N 0 s colAng1.NW_012116910v1 852496 596 + 1687011 accataagaaagtaaaaaccccagtattaaagagaaggcaaatatttgaatggaggcctcatcaaggaaggtataaggagggcatattgcccgagaaagaggctcaacatcatagagacactggagaaatgccagtcaacagtacctctgcaaatctattaaaatggctaaaaacagacaaaaaccatgggccaacccagcttctagtgacgatgcagaggaactaggaccctcataagtggcagtgggaatgggagggatcccaccatgctggaacgtggtccgggagtttcttattgagttaagcacatccttgccacgtcatccagcaaccccactcctgaaatttcccccaagagaaaacttaaacgtgcacacacaaacctgcactcaagtgttcaggcctcattgctcattgccaataactggaaggaaacaaaatgtccatcagca------ggagaaggcgtgaaccaatgcagatgcttccacacagggggcaccaaccagcagtggaaaCATGCACCCCAAATGCCCCAGGTCTCCCAGGCCACATGCCCGGTGAAGAAAACTAGTTTCGGTGGGCACAGGCCGAAGGATGC i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e chlSab2.chr4 89575447 16 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=569039.000000 s hg38.chr3_KI270779v1_alt 26802 491 + 205312 caacacatgacatcttggagaagacagtg-taccgtgtcggggagcagggcagtggtttcgaggggctacgggtggagggGCGAATGGAGGAGCTCTCTGGGGCGATGGCGTGAGCACCTGCACCTCACTGTGGGCTGCTGCGGCTGAGGGGCTGGTACGGCAAACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGC-TCCCACAACTCAGAGACAGAGGGTGTCGCCTCCATGAAACAAAAACATATTT---TAAAAAAAAAC-CTCTTAAAATTAAGAAAAAAACCACAAAAAGTATTTCATAAGCGCATT-GACTTTGAGTTGACACAATCTACCTGGGAGCATGGAACTGAAACCACAGGCTTGGCAATCCCGGAGGGAGA-GGGTGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAAC--ATTT-AAAAAGCAGCAGGGTGGAAATAATTTCTGCTGATGAGGTTGCATCTCT s panTro5.chr3 200019789 493 + 202621043 caacacatgacatcttggagaagacagtg-taccgtgtcggggagcagggcagtggtttcgaggggctacgggtggagggGCGAATGGAGGAGCTCTCTGGGGCGATGGCGTGAGCACCTGCACCTCACTGTGGGCTGCTGCGGCTGAGGGGCT-GTACGGCAAACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGC-TCCCACAACTCAGAGACAGAGGGTGTCGCCTCCATGAAATAAAAACATATTTAAAAAAAAAAAAAA-CTCTTAAAATTAAGAAAAAACCCACAAAAAGTATTTCATAAGCGCATT-GACTTTGAGTTGACATAATCTACCTGGGAGCATGGAACTGAAACCACAGGCTTGGCAATCCCGGAGGGAGA-GGGTGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAAC--ATTT-AAAAAGCAGCAGGGTGGAAATAATTTCTGCTGATGAGGTTGCATCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 872 489 + 190779 caacacatgacatcttggagaagacagtg-taccgtgtcggggagcagggcagtggtttcgaggggctacgggtggagggGCGAATGGAGGAGCTCTCTGGGGCGATGGCGTGAGCACCTGCACCTCACTGTGGGCTGCTGCGGCTGAGGGGCT-GTACGGCAAACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGCTTCCCACAACTCAGAGACAGAGGGTGTCGCCTCCATGAAACAAAAACATATTT---TAAAAAAAAAA-CTCTTAAAATTAAGAAAAAA-CCACAAAAAGTATTTCATAAGCACATT-GACTTTGAGTTGACATAATCTACCTGGGAGCATGGAACTGAAACCACAGGCTTGGCAATCCCGGAGGGAGA-GGGTGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAAC--ATTT-AAAAAGCAGCA-GGTGGAAATAATTTCTGCTGATGAGGTTGCATCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851162 482 - 880730 caacacatgacatcttggagaagacagtg-taccgtgttggggagcagggcagtggtttcgaggggatacgggtggagggGCGAATGGAGGAGCTCTCTGGG--GGTGGCGTGAGCACCTGCACCTCACTGTGGGCTGCTGCGGCTGAGGGGCT-GTACAGCAAACCCTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGC-TCCCACAACTCAGAGACAGAGGGTGTCACCTCCATGAAACAAAAACATATTT----AAAAAAAAAA-CTCTTAAAATTAAGAAAAAA--CACAAAAAGTATTTCATAAGCGCATT-GACTTTGA-TTGACATAATCTACCTGGGAGCATGGAACTGAAACCACAGGCTTGGCAATCCCGGAGGGAGA-GGGTGGACGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAAC--ATTTAAAAAAGCAGCAAGGTGGAAATAAT---TGCTGATGAGGTTGCATTTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 269380 469 + 180051392 cgccacatgacaccttggagaagacagtgctaccgtgttgggaagcagggcagtggtttcgaggggctacgggtggaggggcgaatggaGGCGCTCTCTGGGGCGAAGGC-TGAGCACCTGCACCTCACTGTGG---GCTGCGGCTGAGAGGCT-GTACAGCAGACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGC-GCCCACAAGTCAAAGACAGAGGGTGTCACCTCCATGAAACAAAAACA---TT---AAAAAAAAAAACCTCCTAAAATT-----------------AAGTATTTCTTAAGCACGTTGGACTTTGAGTTGACACAATCTGCCTGGGAGCATGGAAC--AAACCACCGGCTTGGCGACCCCGGAGGGAGA-GGGTGGAGGGTTTAGACTTCAGTTGAAGGGCTCAGTACCTGGCTATAGGAAATAACAGATTT-CAAAAGCGGCAGGGAGGAAATAATTTCTGCTGATGAGGTTGCATTTCC i rheMac8.chr6 C 0 C 0 s colAng1.NW_012116910v1 853092 484 + 1687011 TGCCACATGACATCTTGGAGAAGACAGTGCTACTGTGTTGGGGAGCAGGGCAGTGGTTTCAAGGGGCTACGGATGGAGGGGCGAATGGAGGCGCTCTCTGGGGCAAAGGC-TGAGCACCTGCACCTCACTGTGG---GCTGCGGCTGAGAGGCT-GTACAGCAAACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGC-GCCCACAAGTCAAAGACAGAGGGTGTCACCTCCATGAAACAAAAACA---TT---AAAAAAAAAAA-CTCCTAAAATTAAGAAAAAA-ACAC-AAAAGTATTGCATAAGCGCGTTGGACTTTGAGTTGACACAATCTGCCTGGGAGCGTGGAAC--AAACCACCGGCTTGGCGACCCCAGAGGGAGAGGGGCGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTGTAGGAAATAACAGATTT-CAAAAGCGACAGGGAGGAAATAATTTCTGCTGATGAGGTTGCATTTCC i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e chlSab2.chr4 89575447 16 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=60099.000000 s hg38.chr3_KI270779v1_alt 27293 31 + 205312 CCAGATAGCCGGCAGAGTAAATTAAAGCAAT s panTro5.chr3 200020282 31 + 202621043 CCAGATAGCCGGCAGAGTAAATTAAAGCAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1361 31 + 190779 CCAGATAGCCGGCAGAGTAAATTAAAGCAat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851644 31 - 880730 CCAGATAGCCGGCAGAGTAAATTAAAGCAAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 269849 31 + 180051392 CCAGATAGCTGGCAGAGTAAATTAAAGCAAT i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89575463 31 - 91010382 CCAGATAGCTGGCAGAGTAAATTAAAGCAAT i chlSab2.chr4 I 16 C 0 s colAng1.NW_012116910v1 853576 31 + 1687011 CCAGATAGCTGGCAGAGTAAATTAAAGCAAT i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2918.000000 s hg38.chr3_KI270779v1_alt 27324 2 + 205312 AT s panTro5.chr3 200020313 2 + 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1392 2 + 190779 ag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851675 2 - 880730 AT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 269880 2 + 180051392 AT i rheMac8.chr6 C 0 T 79665 s macFas5.chr6 180254804 2 - 181584905 ac i macFas5.chr6 N 0 C 0 s chlSab2.chr4 89575494 2 - 91010382 AT i chlSab2.chr4 C 0 I 12032 s colAng1.NW_012116910v1 853607 2 + 1687011 AT i colAng1.NW_012116910v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e nomLeu3.chr11 120785647 3854 + 123690457 I a score=7896.000000 s hg38.chr3_KI270779v1_alt 27326 3 + 205312 agt s panTro5.chr3 200020315 3 + 202621043 agt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1394 3 + 190779 agt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851677 3 - 880730 agt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190217 3 + 180051392 agt i rheMac8.chr6 T 79665 C 0 s macFas5.chr6 180254806 3 - 181584905 agt i macFas5.chr6 C 0 C 0 s manLeu1.NW_012107609v1 20616 3 + 930449 agt i manLeu1.NW_012107609v1 N 0 C 0 s colAng1.NW_012116910v1 853609 3 + 1687011 AGT i colAng1.NW_012116910v1 C 0 I 11332 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e chlSab2.chr4 89575496 12032 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=75003.000000 s hg38.chr3_KI270779v1_alt 27329 58 + 205312 cttgctctgttgcccaggctggagtgaagtggcgccatctccgctcactgtaagctcc s panTro5.chr3 200020318 58 + 202621043 cttgctctgttgcccaggctggagtgaagtggtgccctctctgctcactgtaagctcA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1397 58 + 190779 cttgctctgttgcccaggctggagtgaagtggcgccatctccgctcactgtaagctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851680 58 - 880730 cttgctctgttgctcaggctggagtgaagtggcgccatctccgctcactgtaagctcc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190220 49 + 180051392 cttgctgtgttgcccaggctggagggcagtggcgtgatctccgctGTCC--------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180254809 49 - 181584905 cttgctctgttgcccaggctggagggcagtggcgtgatctccgctgtcc--------- i macFas5.chr6 C 0 C 0 s manLeu1.NW_012107609v1 20619 49 + 930449 cttgctctgttgcccaggctggagggcagtggcgtgatctccgctGTCC--------- i manLeu1.NW_012107609v1 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr5 41958138 0 + 159171411 I e saiBol1.JH378155 147144 48915 - 16417988 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e chlSab2.chr4 89575496 12032 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=11395.000000 s hg38.chr3_KI270779v1_alt 27387 3 + 205312 gcg s panTro5.chr3 200020376 3 + 202621043 gcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1455 3 + 190779 gcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851738 3 - 880730 gcg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190269 3 + 180051392 gcg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180254858 3 - 181584905 gcg i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89587528 3 - 91010382 gcg i chlSab2.chr4 I 12032 C 0 s manLeu1.NW_012107609v1 20668 3 + 930449 gcg i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136482 3 - 204313951 gca i calJac3.chr2 T 47777 C 0 s saiBol1.JH378155 98229 3 - 16417988 gca i saiBol1.JH378155 T 48915 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=20195.000000 s hg38.chr3_KI270779v1_alt 27390 4 + 205312 ggag s panTro5.chr3 200020379 4 + 202621043 ggag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1458 4 + 190779 ggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851741 4 - 880730 ggag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190272 4 + 180051392 ggag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180254861 4 - 181584905 ggag i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89587531 4 - 91010382 ggaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 20671 4 + 930449 ggag i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136485 4 - 204313951 ggag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98232 4 - 16417988 ggag i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 197898 4 + 306014 ggag i cebCap1.NW_016108150v1 N 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=449681.000000 s hg38.chr3_KI270779v1_alt 27394 90 + 205312 aatctcttgaaccctggaggcagaggttgcggtgagccgagatcccgccattccactccagcctgggcaacaagagcgaaactccgtctc s panTro5.chr3 200020383 90 + 202621043 aatgtcttgaaccctggaggcagaggttgcggtgagccgagatcccgccattccactccagcctgggtaacaagagcgaaactccgtctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1462 90 + 190779 aatgtcttgaaccctggaggcagaggttgcggtgagccgagatcccgccattccactccagcctgggcaacaagagcgaaactccgtctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851745 90 - 880730 aatctcttgaaccctggaggcagaggttgcggtgagccgagatcccgccattccactccagcctgggcaacaagagcgaaactccgtctc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190276 90 + 180051392 aatctcttgaaccctggaggcggaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaacaagagcgaaactccatttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180254865 90 - 181584905 aatctcttgaaccctggaggtggaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaacaagagcgaaactccatttc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89587535 90 - 91010382 aatctcttgaaccctggaggcggaggttgcagtaagctgagatcgcaccattgcactccagcctgggcaacaagagtgaaactccatttc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 20675 90 + 930449 aatcgcttgaaccctggaggcggaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaacaagagcgaaactccatttc i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136489 89 - 204313951 aatctcttgaaccctggaggtggaggttatagtgacacaagatcatgccattgcactccagcct-tgcaacaagagctaaactccatctc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98236 89 - 16417988 aatctcttgaaccctggaggtggaggttgtagtgagccaagatcatgccactgcactccagcct-tgcaacaagagctaaactccatctc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 197902 89 + 306014 aatctgttgaaccctggaggcagaggttgtagtaagccgagatcatgccactgcactccagcct-tgcaacaagagctaaactccatccc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 62698 89 + 211231 aatctcttgaaccctggaggtggaggttgtggtgacacaaggtcatgccgctgcactccagcct-tgcaacaagagctaaactccatctc i aotNan1.NW_018494784v1 N 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=8119.000000 s hg38.chr3_KI270779v1_alt 27484 6 + 205312 aaacc----------a s panTro5.chr3 200020473 6 + 202621043 aaacc----------a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1552 6 + 190779 aaacc----------a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851835 6 - 880730 aaacc----------a i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190366 6 + 180051392 agaca----------a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180254955 6 - 181584905 agaca----------a i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89587625 6 - 91010382 agaca----------a i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 20765 6 + 930449 agaca----------a i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136578 16 - 204313951 aaacaaaacaaaacaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98325 5 - 16417988 aaac-----------a i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 197991 1 + 306014 ---------------a i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 62787 11 + 211231 aaacaaaaca-----a i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30158491 6 - 42124431 AGACA----------A i canFam3.chr34 N 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=246485.000000 s hg38.chr3_KI270779v1_alt 27490 61 + 205312 aacaaaaT---------TAGGTAACTAACCCAGGACTA--AAACAGCGTAACTTTAAAAAAATAAGTCTAGG s panTro5.chr3 200020479 61 + 202621043 aacaaaaT---------TAGGTAACTAACCCAGGACTA--AAACAGCGTAACTTTAAAAAAATAAGTCTAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1558 61 + 190779 aacaaaaT---------TAGGTAACTAACCCAGGACTA--AAACAGCGTAACTTTAAAAAAATAAGTCTAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851841 61 - 880730 aacaaaaT---------TAGGTAACTAACCCAGGACTA--AAACAGTGTAACTTTAAAAAAATAAGTCTAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190372 67 + 180051392 aacaaaacaaaaTTAGATAGATAACTCACCCAGCACCA--AAACTGCATAACT---AAAAAAAAAGTCTAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180254961 67 - 181584905 aacaaaacaaaaTTAGATAGATAACTCACCCAGCACCA--AAACTGCATAACT---AAAAAAAATGTCTAGG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89587631 67 - 91010382 aacaaaacaaaaTTAGATAGATAACTAACCCAGCACCA--AAACTGCATAACT---AAAAAAAAAGTCTAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 20771 66 + 930449 aacaaaacaaaaTTAGATAGATAACTAAGCCAGCACCA--AAACTGCATAACT----AAAAAAAAGTCTAGG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136594 62 - 204313951 aacaaaaAAA-------TAGATAACTAACCTAGGACCA--AAACTGCATAACTTTC-AAAAAAATGTCTAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98330 62 - 16417988 aacaaaacaa-------TAGATAACTAACGTAGGACCA--AAATTGCGTAACTTTC-AAAAAAATGTCTAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 197992 62 + 306014 aacaaaacaa-------CAGATAACTAACCTAGGACCA--AAATTGCATAACTTTC-AAAAAAATGTCTAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 62798 61 + 211231 aacaaaaaaa-------TAGGTAACTAACCTAGGACCA--AAATTGCGTAACTTTC--AAAACATGTCTAGG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30158497 57 - 42124431 TAAAAAAT-------------TAAGTCATCTGAAAGTACTCAACTGCAAACCTCTC--AAGGTAAGTCTGCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 527151 54 + 913073 AACAAAAT---------TAGATATCTGAA--AGTACTA--AAATA----AACTTTC-AAGAAAACGTCTACG i dasNov3.JH577625 N 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1529921.000000 s hg38.chr3_KI270779v1_alt 27551 276 + 205312 AGGTATGatgttcattccctgcaagccaataaaggtcac--------------gtctgggg---cataca--tctaaaaaaataatcctaa----agagaaagttatggt---cacaaatatgttctgtatggtg----ttattaagagcaaaaa-tgggaaacaacccaaatatcagtaaaatgggactgAAC-CCTTG-------CAAATTTACTAAAAT-----------AAAATTGT-----T------AAACATGATGCA-C---------------------------------AAGACGAAGATTTTAA-----------TAAAGTGAAAAGACAGGAAACA-------------TAC----TTACTAATGATTATTGGTTTATTTTTCATG s panTro5.chr3 200020540 276 + 202621043 AGGTATGatgttcattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tctaaaaaaaaaatcctaa----agagaaagttatggt---cacaaatatgttctgtacggtg----ttattaagagcaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CCTTG-------CAAATTTACTAAAAT-----------AAAATTGT-----T------AAACATGATGCA-C---------------------------------AAGACGAAGATTTTAA-----------TAAAGTGAAAAGACAGGAAACA-------------TAA----TTACTAATGATTATTGGTTTATTTTTCATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1619 276 + 190779 AGGTATGatgttcattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tctaaaaaaataatcctaa----agagaaagttatggt---cacaaatatgttctgtacggcg----tttttaagagcaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CCTTG-------CAAATTTACTAAAAT-----------AAAATTGT-----T------AAACATGATGCA-C---------------------------------AAGATGAAGATTTTAA-----------TAAAGTGAAAAGACAGGAAACA-------------TAC----TTACTAATGATTATTGGTTTATTTTTCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 851902 281 - 880730 AGGTATGatgttcattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tctaaaaaaaaaatcctaa----agacaaagttatggt---cacaaatatgttctgtacggtg----ttattaagagcaaaca-tgggaaacaacccaaatatcaataaaatgggactgAAC-CCTTG-------CAAATTTACTAAAATAACTC------AAAATTGT-----T------AAACATGATGCA-C---------------------------------AAGACGAAGATTTTAA-----------TAAAGTGAAAAGACAGGAAACA-------------TAA----TTACTAATGATTATTGGTTTATTTTTCATG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190439 290 + 180051392 AGGTACTatgtccattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tccaagaaaataatcctaa----agatgaagttacggt---cacaaatatgttctgtacggtgttatttattaagagtaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CATTG-------CAAATTTACTAAAATAACTC------AACATTGT-----T------AAACATCTCGCA-T---------------------------------AAGAGAAAGATTTTAA--TAATT----TAAAGTGAAAAAACAGGAAACA-------------AAA----TTACTAATGATTATTGGTTTATTTTTCATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255028 290 - 181584905 AGGTACTatgtccattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tccaagaaaataatcctaa----agatgaagttacggt---cacaaatatgttctgtacggtgttatttattaagagtaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CATTG-------CAAATTTACTAAAATAACTC------AACATTGT-----T------AAACATCTCGCA-T---------------------------------AAGAGAAAGATTTTAA--TAATT----TAAAGTGAAAAGACAGGAAACA-------------AAA----TTGCTAATGATTATTGGTTTATTTTTCATG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89587698 285 - 91010382 AGGTACTatgtccattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tccaagaaaataatcctaa----agatgaagttacggt---cacaaatatgttttgtacggtgttatttattaagagtaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CATTG-------CAAATTTACTAAAAT-----------AACATTGT-----T------AAACATCTCGCA-T---------------------------------AAGAGAAAGATTTTAA--TAATT----TAAAGTGAAAAGACAGGAAACA-------------AAA----TTACTAATGATTATTGGTTTATTTTTCATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 20837 288 + 930449 AGGTACTatgtccattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tccaagaaaataatcctaa----agatgaagttacggt---cacaaatatgttctgtacggtgttatttattaagagcaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CATTG-------CAAATTTACTAAAATAACTC------AACATTGT-----T------AAACATCTCGCA-T---------------------------------AAGAG--GGATTTTAA--TAATT----TAAAGTGAAAAGACAGGAAACA-------------AAA----TTACTAATGATTATTGGTTTATTTTTCATG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136656 290 - 204313951 AGGCATTATGTTTATTAACTGCAAGccaataaatgccac--------------atctgggg---catgca--tctaaggaaataattctaa----agataaagttatggt---cacagatatgttctttatggtgttatttattagcagcaaaaa-tggga---aacccaaatatcaacaaaatgggactgAAT-CATTG-------AAAACTTACTAAAATAACTC------AAAACAGT-----T---AAAAAACATTATGTA-C---------------------------------AATAGGAAGATTTTAA--TACTT----TAAAGTGAAAAGGCAGGAAACA-------------GAA----TTACTAATGATTATTGGTTTAATTTTCATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98392 291 - 16417988 AGGCATTatgtttattccctataagccaataaaggccac--------------atctgggg---catgca--cctaaggaaataatcctaa----agataaagttatggt---cacagatatgttctttaaggtgttatttattagtagcaaaaa-tggga---aacccaaatatcaacaaaatgggactgAAT-CGTTG-------CAAATTTACTAAAATAACTC------AAAATAGT-----T--AAAAAAACATTATGTA-C---------------------------------AATAGGAAGATTTTAA--TAATT----TAAGGTGAAAAGGCAGGAAACA-------------TAA----TTACTAATGATTATTGGTTCATTTTTCATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198054 280 + 306014 AGGCATTATGTTTATTCCCTGT-AGCCAATAAAGGCCAC--------------ATCTGGGG---CATGCA--TCTAAGGAAATAATCCTAA----AGATAA---------------AGACATGTTCTTTATGGTGTTATTTATTAGTAGCAAAAA-TGGGA---AACCCAAATATCAACAAAATGGGACTGGAT-CATTG-------CAAATGTACTAAAATAATTC------AAAATAGT-----TAAAAAAAAACATTATGTA-C---------------------------------AATAGGAAGATTTTAA--TAATT----TAAAGTGAAAAGGCAGGAAACA-------------TAA----TTACTAATGATTATTGGTTTATCTTTCATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 62859 282 + 211231 AGGC---AGGTTTATTCACTGCGAGCCCATAAAGGCCAC--------------ATGTGGGG---CAGGCA--Tctaaggaaataatcctga----agataaagttgtggt---cacagatacgttcttcatggtgttatttattagtagcaaaaa-tagga---aacccaaatatcaacaaaatgggactgAAT-CATTG-------CAAATTCACTAAAATAACTC-----------AGT-----T---AAAAAACATTATGTA-C---------------------------------AATAGGAAGATTTTAA--TGATT----TAAAGTGAAAAGGCAGGAAACA-------------GAA----CTACTAACGATTATTGGTTTATTTTTCATG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46070485 274 - 120421639 AGCTGTCATATTTATTTCCTCTGCACCAACAACATCCAT--------------TTTGGGGT---TATAAAG-TTCAAGGAAATAATTCAAA----ATATAAAGTGTTGTG---CATGAATATATTCCATATTTCCTTATTTATTAATAAAAAAAC-AAAGA---------------AATAAAATGGGAACGGTT-CATTG-------TAAACTT----AAACAATTC------AAAATAATGGTCAT------AAAGATTGTGCACC---------------------------------AAGAGGAAAACCTTAATCTAATA----TTAACTGAAAATTCAGGAAAC---------------AA----TTAC----GATTATTGGTTTACTTTTTATG i mm10.chr13 N 0 C 0 s canFam3.chr34 30158554 367 - 42124431 AAGAAGAGTGCTCATTTCCTCCAAGCCAGTAAAGTCCACTTGGAGGACACTGGGCCTGAGGAAACATACAATTCCAAGAAAAGCAACCTAATCGTAAATAAAGACAAATTATACATGGTTAGAGTCTTCACAGGCTTCTTTAGTATTGGCAAAGATTTGGAAACCACCTAAACATCAATAAAATAGGAGTGGATGGATTGTCATAAACTAACTCATTAAAATAATTCTAAGATTACATTGC-----A------CACAGCTGTGCA-CCTATAAGCTGCATAGCACTGGATTAGGAGGATTAGGAGGAAGATCGTAA--TAATA----CAACACGAAAC-ACAGGAAAGT-------------GAAAACGGTACTTACAACTCTTGGTTTCTTTCCCATG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 527205 303 + 913073 AAAtatcatat--agtccct---------taaacttcat--------------ttttgggt---catatag-cctaaggaaataatagtaaataaaaataaaactttatg---tacaaaaatatcctttacagtgttcttta-taatagcaaaaatttggaaacaacttaaatgtcaataaaatgggaatggaC-TGTTG-------AAAACATACTCTAAT---TC------AAAATCATGTTCAT------GAAGATTGCACA-C---------------------------------AAGAATAAAATTTCAG--TACTCAACGTTAGGTGAAAAAGCAGGACACACCATTACATTATTACA----TTACTTATGtttatttgtttactttccatg i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=827655.000000 s hg38.chr3_KI270779v1_alt 27827 145 + 205312 CCACTTCATTCCACAAAAAGATTTCAGATATCTTAGAAAAAGA-CACACTAGAAATATTAAAATAC--TATCTGAACCAGAAGCAGAATCAGGGTAAGCTAGCAGAAAGGCGTATGAGCCAAA---GGGATCTACCCAGCTTTCAAAGCTG s panTro5.chr3 200020816 145 + 202621043 CCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGA-CACACTAGAAATATTAAAATAC--TATCTGAACCAGAAGCAGAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAA---GGGATCTACCCAGCTTTCAAAGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 1895 145 + 190779 CCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGA-CACACTAGAAATATTAAAATAC--TATCTGAACCAGAAGCAGAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAA---GGGATCTACCCAGCTTTCAAAGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852183 142 - 880730 CCACTTCATTCCACAAAAAGATTTCAGATATCTTACAGAAAGA-CACACTAGAAATATTAAAATAC--TATCTGAACCAGAAGCAGAATCAGGGTAAGCTAGCAGAAAGGCGT---AGCCAAA---GGGATCTACCCAGCTTTCAAAGCTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190729 145 + 180051392 CCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGA-CACACTAGAAATATTAAAATAC--TCTCTGAACCTTAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAA---GGGATCTACGCATCTTTAAAAGCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255318 145 - 181584905 CCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGA-CACACTAGAAATATTAAAATAC--TCTCTGAACCTGAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAA---GGGATCTACGCATCTTTAAAAGCTG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 173596 144 + 218577 CCACTTCATTCCACAAAAAG-TTTCAGATATCTTACAAAAAGA-CACACTAGAAATATTAAAATACTGTCTCTGAACCTGAAGCAAAATCGGGTAAGCCTAGCAGAAAGGCGTATAAGCCAGA---GGAATC-ACGC-TCTTTAAAAGCTG i cerAty1.NW_012004452v1 N 0 C 0 s chlSab2.chr4 89587983 145 - 91010382 CCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGA-CATACTAGAAATATTAAAATGC--TCTCTGAACCTGAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAA---GGGATCTACGCACCTTTAAAAGCTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 21125 145 + 930449 CCACTTCATTCCACAAAAAGGTTTCAGATATCTTACAAAAAGA-CACACTAGAAATATTAAAATAC--TCTCTGAACCTGAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAA---GGGATCTACGCATCTTTAAAAGCTG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 136946 142 - 204313951 CCACTTCATTCCACAAAAAGATCTCAGGTATTTTACAAAACGA-CACACTAGAAAAATTAAAACAC--TATCCGAACCAGAAGCAAAATCAGGGTAAGCTGGCAGAAAGTCGTATAAGCCAAA---GGGAT---CGCAGCTTTCAAAGCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98683 148 - 16417988 CCACCTCATTCCACAGAAAGATCTCAGGTATCTTACGAAAGGA-CACACTAGAAAAATTAAAACGC--TATCTGCACCAGAAGCAACATCAGGGTGCGCTGTCAGAAAGCCGCGGAAGCCAAAGGCGGGGTCTGCGCAGCTTTCAGAGCGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198334 148 + 306014 CCACTTCATTCCACAAAAAGATCTCAGGTATCTTACAAAACGA-CACGCTAGAAAAATTAAAACAC--GATCTGAACCCGAAGCAAAGTCAGGGTTGGCTGGCAGAAGGTCGTACCAGCCAAAGGAGGGGTCTGCGCAGCTTTCACAGCGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63141 126 + 211231 CCCCTTCATTCCACGAAAAGATCTCAGGTGTCCTACAAAACGA-CACACTAGAAA----------------CTG-ACCAGACGCAACATCAGGCTGAGC-GGCAGGAAGCCGCGTGAGCCGAA---GGGAC---CGCAGCGTTCACAGCCG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46070759 127 - 120421639 CTATTTAATTCCACCGAAC-ATTTCAGCTAT-----------A-CTCACTAGAAAAATAGAAAAAC--TATCTGAAAGTGA--TCAAATGAGAGCGCGTTTGCAATATGGGATGCTAGCCACG------ATCTAAGCAGCTTTCA-GGATG i mm10.chr13 C 0 C 0 s canFam3.chr34 30158921 116 - 42124431 CCACTCAGTCCCACAAAAGAATC-CGGGTACCTTACATAAGCA-CGCCCCAAAGGAA---AGACGC--TCGGTGGACCAGCGGCGAGGTC-------GCGCGCGTCAGGGAGGACAAGCC------CCGGTC---------------GCCG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 527508 135 + 913073 ccggttttttccac-aaaggatttcagatatcttacaaaaatattacgacaggaaaagctgaaaaa--ggtaaaaatcagg-gcgaaattag--------tggaaaaaaacccataagccaaa----ggttccacaccgctttcaaagctg i dasNov3.JH577625 C 0 I 159 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=61861.000000 s hg38.chr3_KI270779v1_alt 27972 13 + 205312 ACCAC-ggccgtgc------ s panTro5.chr3 200020961 13 + 202621043 ACCAC-ggccgtgc------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2040 13 + 190779 GCCAC-ggccatgc------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852325 13 - 880730 ACCAC-ggccgtgc------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190874 13 + 180051392 ACCAC-ggccctgc------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255463 13 - 181584905 ACCAC-ggccctgc------ i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 173740 13 + 218577 ACCAC-ggccctgc------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89588128 13 - 91010382 ACCAC-ggccctgc------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 21270 13 + 930449 ACCAC-ggccctgc------ i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 137088 13 - 204313951 ACCCA-ggcggcgc------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98831 13 - 16417988 ACCCA-ggccgtgc------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198482 13 + 306014 ACCCA-ggccgtgc------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63267 13 + 211231 ACCCG-ggccgagc------ i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46070886 14 - 120421639 ACAACAGGCCGGGC------ i mm10.chr13 C 0 I 218 s canFam3.chr34 30159037 19 - 42124431 ACCCT-CACCGAGTCACCGG i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 527643 159 + 913073 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=652216.000000 s hg38.chr3_KI270779v1_alt 27985 125 + 205312 gcagtggctctgtctg-taatctccgcacttggggaggccgaggaggtaggat-cgcttga--ggccacaagttcgagaccagcctgggcaacagagcaagatcccgcctctaccaaaaatttaaaaat s panTro5.chr3 200020974 125 + 202621043 gcagtggctctgtctg-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggccacaagttcgagaccagcctgggcaacagagcaagatcccgcctctaccaaaaatttaaaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2053 125 + 190779 gcagtggctctgtctg-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggccacaagttcgagaccagcctgggcaacagagcaagatcccgcctctaccaaaaatttaaaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852338 125 - 880730 gcagtggctctgtctg-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggtcacaagttcgagaccagcctgggcaacagagcaagatcccgcctctacaaaaaatttaataat i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 190887 125 + 180051392 gcggtggctccgcccc-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggccaagagtttgagaccagcccgggcaacacagcaagatcccgccactgcaaaaaatttaaaaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255476 125 - 181584905 gcggtggctccgcccc-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggccaagagtttgagaccagcccgggcaacacagcaagatcccgccactgcaaaaaatttaaaaat i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 173753 126 + 218577 gcggtggctccgccccataatccccgcacttagggaggccgaggacggaggatgcgcttgacggcccaagagttcg-gaccagccc-ggcaacacagc-agatcccgccactacgaaaaCATTAAAAGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89588141 125 - 91010382 gcggtggctccgcccc-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggccaagagttcgagaccagcccgggcaacacagcaagatcccgccactacaaaaaaattaaaaat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 21283 125 + 930449 gcggtggctccgcccc-taatccccgcacttggggaggccgaggagggaggat-cgcttga--ggccaagagtttgagaccagcccgggcaacacagcaagatcccgccactacgaaacattcaaaaat i manLeu1.NW_012107609v1 C 0 M 1390 s calJac3.chr2 137101 119 - 204313951 gctgtggctccgcccg-taat-cccacatgttaggaggcagaggagggaggat-cgcttga--ggccaagagttcgagacc-----gggcaacaaagcgagagcccgcctctacaaaaaatttaaaaat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98844 120 - 16417988 gcggtggctccgcccg-caatccccgcgctttgggaggcagaggatggaggat-cgctgga--ggccaagagttcgcgacc-----gggcaacgaagcaagatcccgcctctccaaactatttaaaaat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198495 120 + 306014 gcggtggctccgcccg-caatccccgcgctctgggaggcagaggagggaggat-cgctcga--ggccaagagttcgagacc-----gggcaacaaagcaagatcccgcctctacaaaaaatttaaaaat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63280 120 + 211231 gcggtggcgccgcccg-cgatccccgcattgtgggaggcagaggagggagggc-cgctcga--ggccaggagttcgagacc-----gggcagcaaagcaagatcccgcctctacaaaaaatttaaaact i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30159056 61 - 42124431 CCCGTGTCCACCGCCG-CGGCCCCCGCA---GGGTGGACCGGAGC-----GCC-CGCCCGG--CGCCCTGACC-------------------------------------------------------- i canFam3.chr34 C 0 C 0 e mm10.chr13 46070900 218 - 120421639 I e dasNov3.JH577625 527643 159 + 913073 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=170369.000000 s hg38.chr3_KI270779v1_alt 28110 41 + 205312 c-agccggAAGCCAGACACTAGGGACATGGC-TGAGGATCGCT s panTro5.chr3 200021099 41 + 202621043 c-agccggAAGCCAGAGGCTAGGGACATGGC-TGAGGATCGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2178 41 + 190779 c-agccggAAGCCAGAGGCTAGGGACATGGC-TGAGGACCGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852463 41 - 880730 c-agccggAAGCCAGAGGCTAGGGACATGGC-TGAGGATCGCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191012 41 + 180051392 t-agccggAAGCCAGAAGCTAGGGACATGGC-TGAGGATCGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255601 41 - 181584905 t-agccggAAGCCAGAAGCTAGGGACATGGC-TGAGGATCGCT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 173879 42 + 218577 TAAGCCGCAAGCCAGAAGCCAGGGACATGGCTTGAGGATCGC- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89588266 41 - 91010382 t-agccggAAGCCAGAAGCTAGGGACATGGC-TGAGGATCGCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137220 41 - 204313951 t-agccggAAGCCAGAGGCTGGGGACATGAA-TGAGGGTGACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 98964 41 - 16417988 t-agccggAAGCCAGAGGCTGGGGACATGGA-TGAGGGAGACT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198615 41 + 306014 t-agccggAAGCCAGGGGCTGGGGACATGAG-CGAGGGAGGCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63400 41 + 211231 g-agccggAAGCCAGAGGCCGGGGACAGGAA-TGAGGGAGGCG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30159117 15 - 42124431 T-ACTCCGACCCC-------------------TGA-------- i canFam3.chr34 C 0 C 0 e mm10.chr13 46070900 218 - 120421639 I e dasNov3.JH577625 527643 159 + 913073 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=213377.000000 s hg38.chr3_KI270779v1_alt 28151 60 + 205312 CCCGCCCCTCGGAGGCCAG--AAACCGAGGGTCACTCCCGCT-CTCTAGAGGCCGGA----GGCCCC s panTro5.chr3 200021140 60 + 202621043 CCCGCCCCTCGGGGGCCAG--AAACCGAGGGTCACTCCCGCT-CCCTAGAGGCCGGA----GGCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2219 61 + 190779 CCCGCCCCTCGGAGGCCGG--AAACCGAGGGTCACTCCCGCTCCCCTAGAGGCCGGA----GGCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852504 58 - 880730 CCCG-CCCTCGGAGGCCAG--AAACCGAGGGTCACTCCCGCT-CCCCAGAAGCCGGA-----GCCCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191053 60 + 180051392 CCCGCCCCTCGGAGGCCGG--AGACCGAGGGTCACTCCCGCT-CAGTAGAGGCCGGA----GGCCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255642 60 - 181584905 CCCGCCCCTCGGAGGCCGG--AGACCGAGGGTCACTCCCGCT-CAGTAGAGGCCGGA----GGCCCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 173921 60 + 218577 CCCGCCCCTCGGAGGCCGGGAGAACGGAGGGTCACTCCCGCT-CAG-AGAGGCC-GA----GGCCCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89588307 60 - 91010382 CCCGCCCCTCGGAGGCCGG--AGACCGAGGGTCACTCCCGCT-CAGTAGAGGCCGGA----GGCCCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137261 60 - 204313951 CCCACCCCTCCGAGGCCGG--AGGCCGAGGGTCACTCCCGCT-CACTAGAGGCCGGA----GGCCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 99005 59 - 16417988 CCC-CGCCTCCGAGGCCGG--AGACCGAGGGTCCCTCCTGCT-CACCAGAGGCCGGA----GGCCCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198656 60 + 306014 CCCACCCCTCCGAGGCCGG--AGACCGAGGGTCACTCCCGCT-CACTAGAGGCCGGA----GGCCCG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63441 26 + 211231 CCCGCCCCTCCG-GGCCGG--ACACCGAG-------------------------------------- i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30159132 36 - 42124431 CCCACCCCTAGTCCGCCCG--A---------------CTTTT-CCCTAG-------------GCCCT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 527802 53 + 913073 CCCGTCAC-CGGAGGACAG--AGCTTTAAAAACATCGATGCC-----------CGGATCTCAGCCCT i dasNov3.JH577625 I 159 C 0 e mm10.chr13 46070900 218 - 120421639 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=122888.000000 s hg38.chr3_KI270779v1_alt 28211 22 + 205312 -GGGCCGCTCCCGCCCACCTCCG s panTro5.chr3 200021200 22 + 202621043 -GGGCCGCTCCCGCCCACCTCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2280 22 + 190779 -GGGCCGCTCCCGCCCACCTCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852562 22 - 880730 -GGGCCGCTCCCGCCCACCTCCG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191113 22 + 180051392 -GGGTCGCTCCCGCCCACCTCCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255702 22 - 181584905 -GGGTCGCTCCCGCCCACCTCCG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 173981 22 + 218577 -GGGTCGCTCCCGCCCACCTCCG i cerAty1.NW_012004452v1 C 0 I 458 s chlSab2.chr4 89588367 22 - 91010382 -GGGTCGCTCCCGCCCACCTCCG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137321 22 - 204313951 -AGGCAGCTCCCGCCCAACCCCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 99064 22 - 16417988 -GGGCCGCTCCCGCCCGACTCCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198716 22 + 306014 -GGGCCGCTCCCGCCCGACTCCG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63467 21 + 211231 --GGCCGCTCCCTCCCAGCTCCG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 27783 22 + 2165740 -GGGTCGCTCCTGCCCGCGTAGC i otoGar3.GL873745 N 0 I 1 s canFam3.chr34 30159168 21 - 42124431 -GACCTACCCCTGGCCCCCCAC- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 527855 23 + 913073 GAGCACGACTCAGCTGACCCCGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46070900 218 - 120421639 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=9962.000000 s hg38.chr3_KI270779v1_alt 28233 3 + 205312 -CGG s panTro5.chr3 200021222 3 + 202621043 -CGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2302 3 + 190779 -CGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852584 3 - 880730 -CGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191135 3 + 180051392 -CGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255724 3 - 181584905 -CGG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588389 3 - 91010382 -CGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137343 3 - 204313951 -CGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 99086 3 - 16417988 -CGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 198738 3 + 306014 -CGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63488 3 + 211231 -CGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 27806 3 + 2165740 -GTG i otoGar3.GL873745 I 1 C 0 s dasNov3.JH577625 527878 3 + 913073 CCA- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46070900 218 - 120421639 I e canFam3.chr34 30159189 0 - 42124431 C e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=681437.000000 s hg38.chr3_KI270779v1_alt 28236 195 + 205312 ACGAG--CGCCGC-----CCCTTCGACCCCATTCCCTGAGGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAgaaccac----------------------------------ccacg--gggctttaaaaaatgttggtgccCAACATCTCCCCGAAAT--AGGGC---------------CCGC-------------------------CCTATCTCGGTC----GGGGAGCGCGGGACCTCCGTGG--CC-ACCCAGCGCCACCGTCCGCGGGTCC s panTro5.chr3 200021225 195 + 202621043 ACGAG--CGCCGC-----CCCTTCGACCCCATTCCCTGCGGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAgaaccac----------------------------------ccacg--gggctttaaaaaatgttggtgccAAACACCTCCCCGAAAT--AGGGC---------------CCGC-------------------------CCTATCTCGGTC----GGGGAGCGCGGGACCTCCGTGT--CC-ACCCAGCGCCACCGTCCGCGGGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2305 195 + 190779 ACGAG--CGCCGC-----CCCTTCGACCCCATTCCCTGCAGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAgaaccac----------------------------------ccacg--gggctttaaaaaatgttggtgcccaacacctccccgaaat--AGGGC---------------CCGC-------------------------CCTATCTCGGTC----GCGGAGCGCGGGACCTCCGTGT--CC-ACCCAGCGCCACCGTCCGCGGGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852587 192 - 880730 ACGAG--CGCCGC-----CCTTTCGACCCCATT-CCTGCGGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAGAACCAC----------------------------------CCACG--GGGCTTTAAAAAGTGTTGGTGCCCAACACCTCCCCGAAAT--AGGGC---------------CCGC-------------------------CCTATCTCGGTC----GGGGAGCGCGGGACCT-CGTGT--CC-ACCCAGCGCCACCGT-CGCGGGTCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191138 194 + 180051392 GCGAG--CGCAGC-----CCCTCCGACCCCATTCCCTGCGGTCTGGACGTTCAGGCCCCCTCTGTCTGGGCGATCCCGCAGAACCAC----------------------------------CCACG--GCGCTTTAAAAA-TGTTAGTGCCCAACACCTCCCCAAAAT--AGGGC---------------CCGC-------------------------TCTACCTCGGTC----GGGGAGCCCAGGACCTCCGCGT--CC-CCTCAACGCCTCCGTCCGCGGGTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255727 196 - 181584905 GCGAG--CGCAGC-----CCCTCCGACCCCATTCCCTGTGGTCTGGACGTTCAGGTGCCCTCTGTCTGGGCGATCCCGCAGAACCAC----------------------------------CCATG--GCGTTTTAAAAA-TGTTAGTGCCCAACACCTCCCCAAAAT--AGGGC---------------CCGC-------------------------TCTACCTCGGTC----GGGGAGCCCAGGACCTCCGCGTCCCC-CCTCAACGCCTCCGTCCGCGAGTCC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588392 195 - 91010382 ACGAG--CGCAGC-----CCCTCCGACCCCATTCCCTGTGGTCTGGACGTTCAGGCCCCCTCTGTCTGGGCGATCCCGCAGAACCAC----------------------------------CCATG--GCGCTTTAAAAA-TGTTAGTGCCCAACACCTCCCCGAAAT--AGGGC---------------CCGC-------------------------TCTACCTCGCTC----GGGAAGCCCAGGACCCCCGCGT-CCC-TCGCAACGCCTCCGTCCGCGGGTGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137346 195 - 204313951 ACAAG--CGCCGC-----CCCTCCGACCCCATTCCCTGAGGGCTGGACGTTCAGGCCCTCTCGATCTGGGCGATCCCGGAGAACCAT----------------------------------CCACG--GGGCTTTAAAAA-TGTTGGTGCCCGACACCTCCCCAGAAC--AGGGC---------------CCGC-------------------------CCTACCTCAGTC----CGAGAAAGCGGGACCTCGGTGT--CGCCCCCAGCGCCACCGTCCGCAAGTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 99089 170 - 16417988 ACAAG--CGCCGT-----CCCTCCGACCCCATTCCCTG-----------------------CGGTCTGGACGATCCCGGGGAACCAC----------------------------------CCACG--GGGCTTT-ACAA-TGTTGCTGCCCGACACCTCCCCAGAAC--AGGGC---------------CCGC-------------------------CCTACCTCAGTC----GGAGAAAGCGGGACCTCGGGGT--CG-CCCCAGCGCCGCCGTCCGCGGGTCC i saiBol1.JH378155 C 0 M 907 s cebCap1.NW_016108150v1 198741 194 + 306014 ACAAG--CGCCG------CCCTCCGACCCCATTCCCTGCGGTCCGGACGTTCAGGCCCTCTCGGTCTGCGCGATCCCGGAGAACCAC----------------------------------CCACG--GGGCTTTAAAAA-TGTTGGCGCCCGACGCCTCCCCAGAAC--ACGGC---------------CGGC-------------------------CCTACCTCAGTC----GGAGAAAGCGGGACCTCGGTGT--CGCCCCCAGCGCCACCGTCCGCGGGTCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63491 194 + 211231 ACACG--CGCCGC-----CCCTCCGACCCCACTCCCGGCGCTCTGGACGTTCAGGCCCTCGCGGTCTGGGCGACCCCGGAGAACCAC----------------------------------CCACG--GGGCTTTAAAAA-TGCTGGTGCCCGAC-CCTCCCCAGAAC--AGGGC---------------CCGC-------------------------CCTACCTCAGTC----GGAGGAAGCGGGACCTCGGCGT--CGACCCCGGCGCCACCGTCCGCGGGTCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 27809 259 + 2165740 ACGAGGCCGCGGCCACCACTCTCCGA--CCGTTCTCCTCCTCCTGAAGCTTCCGATCCACTCAGTCCTGGCAATTTCAGGGAGCCACGCGGGATTTCATTTTTACTGTTTTTGTTTGTTTTGCATT--GTTTTTTAAGAACTGTGGATGACCGAACCCCACCCTGAGC--AAGGC---------------CTGCGCGGCCGGGCCACCGAGCACCCTGACCTACGGCCGGC----CAGGAGCGCGGGAACCCTACCT--CTTCCTCTGCGCTTCAG-CCGCGGATTC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071118 183 - 120421639 GCGAT--CTCCGC-----CCC-AGGACCCTACTTCCATCTCTCCAGATCATCCGACCCTCTCTGTTTTGGCAAAC---AAGAACCAC----------------------------------CCGAGAAGCACTTTAAAGA-CATTGGCACCTCACTTACCCCTGGAGC--AGAGCCCATCAGCGTTGCTGCCAC-------------------------CCTACCTCAGAC----------------------GTGT--TG---CCACCGCCGC-GTTTACAGG--- i mm10.chr13 I 218 C 0 s canFam3.chr34 30159189 82 - 42124431 -CGAA--CACCGC-----CC---------------------------------GGCCCCC--------------------GACTCAC----------------------------------CCCCG--GGA---------------------------------------GGGGA---------------GCGC-------------------------TCGG--------------------------CTCCGGAT--GC-CCTCAGCGGCACGGTCTGCGGACCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 527881 162 + 913073 CCGAG--CGCCCC-----------GA---CATACCTCCCGGCCGGGGTCGCCGGGCCCTCTC------------CCGGCAGAGCCTC--------------------------------------A--GCGCTGGAAA---CCTCAGGCCGCCGCGTCCCCTCAGCGTCCAGATA---------------CTGT-------------------------CCTCCCGCCGGCTCTGCGCAGGCGCGGCCCCGCCCCTC--AG-CCCCAGCGCGGCCT----------- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=84047.000000 s hg38.chr3_KI270779v1_alt 28431 13 + 205312 GCTTTGCGCAGGC s panTro5.chr3 200021420 13 + 202621043 GCTTTGCGCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 2500 13 + 190779 GCTTTGCGCAGGC i panPan2.chrUn_NW_014024201v1 C 0 M 563 s gorGor5.CYUI01015759v1 852779 13 - 880730 GCTTTGCGCAGGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191332 13 + 180051392 GCTTTGCGCAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255923 13 - 181584905 GCTTTGCGCAGGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588587 13 - 91010382 GCTTTGCGCAGGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137541 13 - 204313951 GCTTTGCGCAGGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 198935 13 + 306014 GCTTTGCGCAGGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63685 13 + 211231 GCTTTGCGCAGGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 28068 13 + 2165740 TCTCTACGCAGGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071301 8 - 120421639 -----GCGCAGGC i mm10.chr13 C 0 C 0 s canFam3.chr34 30159271 11 - 42124431 --TGTGCGCAGGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 528043 11 + 913073 --GGTACTCAGGC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=87045.000000 s hg38.chr3_KI270779v1_alt 28444 40 + 205312 GCGGCGTCCCCGCC----CATTAGA--CCCCTGCCC-GGGCGTGTCG s panTro5.chr3 200021433 40 + 202621043 GCGGCGTCCCCGCC----CCTTAGA--CCCCGGCCC-GGGCGTGTCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 852792 39 - 880730 GCGGCGTCCCCGGC----CTTTAGA---CCCGGCCC-GGGCGTGGCG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191345 36 + 180051392 GCGGCGCCCCCACT----C----AG--CCCCCGCCC-GGGCGTGACG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255936 36 - 181584905 GCGGCGCCCCCACT----C----AG--CCCCCGCCC-GGGCGTGACG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588600 38 - 91010382 GCGGCGCCCCCACT----C----AGCCCCCCCGCCC-GGGCGTGACG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137554 37 - 204313951 GCGGCGCCCCCACT----C----AG--CCCCCGCCCAGGGTGTGGCG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 198948 37 + 306014 GCGGCGCCCCCACT----C----AG--CCCCCGCCCAGGGCGTGGCG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63698 37 + 211231 GCGGCGCCCCCACT----C----AG--CCCCCGTCCAGGGCGGGGCG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 28081 33 + 2165740 GCGGAACCCCGACG----C----AA--CCCCACCCC-CCGCGTG--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071309 31 - 120421639 ---GCACCACCACT----C--------ACGCGAGCC-AGGAGGGGCG i mm10.chr13 C 0 C 0 s canFam3.chr34 30159282 28 - 42124431 GCGATGCCCCCACC---GC----GG------------GGTCGCGGCG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 528054 40 + 913073 GCAGTGCCCTCGCTACCAC----GC--CCACGTCCC-GGGAGCGTCC i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 2513 563 + 190779 M e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=153187.000000 s hg38.chr3_KI270779v1_alt 28484 24 + 205312 TGGTGCGCAGGCGCGATGTCCCCC s panTro5.chr3 200021473 24 + 202621043 TGGTGCGCAGGCGCGATGTTCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3078 24 + 190779 TGGTGCGCAGGCGCGATGTCCGCC i panPan2.chrUn_NW_014024201v1 M 563 C 0 s gorGor5.CYUI01015759v1 852831 24 - 880730 TGGTGCGCAGGCGCAATGTCCCCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191381 24 + 180051392 TAGTGCGCAGGCGCGATGTCCCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255972 24 - 181584905 TAGTGCGCAGGCGCGATGTCCCCC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588638 24 - 91010382 TAGTGCGCAGGCGCGATGTCCCCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137591 24 - 204313951 TGGTGCGCAGGCGCGACGTCCCCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 198985 24 + 306014 TGGTGCGCAGGCGCGACGTCCCCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63735 24 + 211231 TGGTGCGCAGGCGCGACGTCCCCC i aotNan1.NW_018494784v1 C 0 I 159 s otoGar3.GL873745 28114 22 + 2165740 --ATGCGCAGGCGCAATATCCTTC i otoGar3.GL873745 C 0 I 1 s mm10.chr13 46071340 24 - 120421639 TGTTGCGCAGGCGCAGAATCTTCC i mm10.chr13 C 0 C 0 s canFam3.chr34 30159310 23 - 42124431 TGGTGCGCAGGCGCGGTGTCCCC- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 528094 23 + 913073 -TATACGCAGGCGCGGCCCCCTCC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=-52257.000000 s hg38.chr3_KI270779v1_alt 28508 25 + 205312 ACTAGCG-----------------------------------C-----------------------------------------------------------CCCGCCT----------TGACCCGGCC s panTro5.chr3 200021497 29 + 202621043 ACTAGCGCCCC-------------------------------C-----------------------------------------------------------CCCCCCT----------TGACCCGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3102 23 + 190779 ACTAGCG------------------------------------------------------------------------------------------------CCCCCT----------TGACCCGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852855 24 - 880730 ACTACCG-----------------------------------------------------------------------------------------------CCGCCCT----------TGACCCGGGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191405 64 + 180051392 ACTACCGCCCCGCTCGACCCCGGCGTGGTGCGCAGGCGCGATA-----------------------------------------------------------TCCCCCTA------GCGCGACCCCGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180255996 64 - 181584905 ACTACCGCCCCGCTCGACCCCGGCGTGGTGCGCAGGCGCGATA-----------------------------------------------------------TCCCCCTA------GCGCGACCCCGGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588662 64 - 91010382 ACTACCGCCCCGCTCGACCCCGGCGTGGTGCGCAGGCGCGATA-----------------------------------------------------------TCCCCCTA------GCGCGACCCCGGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137615 64 - 204313951 GCGGCCGCCCAGCTGGACCCCGGCGTAGTACGCAGGCGCGGTA-----------------------------------------------------------TCCCCCCA------GCGCGACCCCGGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199009 123 + 306014 GCTGCCGCCCCGCTCGACCCCGGCGTAGTGCGCAGGCGCGGTATCCCCCCTACCCCGCTCGACCCCCGTGTGGTGCGCAGGCGCGGTATCCCCCCCACATCCTCCCCCCC------GCTCGACCCGGGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28137 11 + 2165740 GCTCTCGCGTC---------------------------------------------------------------------------------------------------------------------- i otoGar3.GL873745 I 1 C 0 s mm10.chr13 46071364 20 - 120421639 ---------------------------------AAGCCCGACA-----------------------------------------------------------CCC-----------GCGCGAC------ i mm10.chr13 C 0 C 0 s canFam3.chr34 30159333 22 - 42124431 ------------------------------------------------------------------------------------------------------GCGTCCTAGGCTGGGCGCGACT----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 528117 25 + 913073 ------------------------------------CGCGTCT-----------------------------------------------------------CCTCCCCG---------CGGCTGGGCC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 63759 159 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=489907.000000 s hg38.chr3_KI270779v1_alt 28533 111 + 205312 GTGGTGCGCAGGCGCAGTCTG-CGCAGGGACTGGCG--------GGACTGCGCGGCGGCGACTACAGACGTGTCGGGGGTCCGGGGCCTGTCGCGGTTGCCAAGCGCTCGGCGCTTGGCG s panTro5.chr3 200021526 106 + 202621043 GTGGTGCGCAGGCGCAGTCTG-CGCAGGGACTGGCG--------GGACTGCGCGGAGGCGACTACAGACATGTCAGGGGTACGGGGCCTGTCGCGGTTGCCAAGCGCTCGGCGCT----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3125 106 + 190779 GTTGTGCGCAGGCGCAGTCTG-CGCAGGGACTGGCG--------GGACTGCGCGGAAGCGACTAGAGACATGTCGGGGGTCCGGGGCCTGTCGCGGCTGCTAAGCGCTCGGCGCT----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852879 108 - 880730 GTGG-GCGCAGGCG-AGTCTG-CGCAGGGACTGGCG--------GGACTGCGCGGGTGCGACTACAGACATGTCGGGGGTCCGGggcctgtcgcgggtgctaagtgctcggcgct-ggcg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191469 105 + 180051392 GTGGTGCGCAGGCGCAGTCTG-CGCAGGGACTGGCG--------GGACTGCGTGGCGGCGTCAACAGTCATGTCGGGGGTCCGGAGACTGTCGCGGCTGCTGAGCACTCGGCGC------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256060 105 - 181584905 GTGGTGCGCAGGCGCAGTCTG-CGCAGGGACTGGCG--------GGGCTGCGTGGCGGCGTCAACAGTCATGTCGGGGGTCCGGAGACTGTCGCGGCTGCTGAGCACTCGGCGC------ i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89588726 105 - 91010382 GTGGTGCGCAGGCGTAGTCTG-CGCAGGGACTGGCG--------GGACTGCGTGGCGGCGTCAACAGTCATGTCGGGGGTCAGGAGgctgtcgcggctgctgagcactcggcgc------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137679 102 - 204313951 GTGGTGCGCAGGCGCAGTCTG-CGCGGTGACTGGCG--------GGACAGTACGGCTGCAACT---GACATGTCGGGGGTCCGGAGGCTGTCACGGCTGCTGAGCGCCCAGCGC------ i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199132 102 + 306014 GTGGTGCGCAGGCGCAGTCTG-CGCGGGGACTGGCG--------GGACAGCGCGGCGACGACT---GACATGTCGGGGGTCCGGAGGCTGTCGCGGCTGCTGAGCGCCCGGCGC------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 63918 102 + 211231 GTGGTGCGCAGGCGCAGTCTG-CGCGGGGACTGGCA--------GGACAGCGCGGCTACGACT---GACATGTCGGGGGTCCGGAGGCTGTCGCGGCTGCTGAGCGCCCGGCGC------ i aotNan1.NW_018494784v1 I 159 C 0 s otoGar3.GL873745 28148 110 + 2165740 GTGGTGCGCAGGCGCAACACG-GTGGGAGTTTGGGGGTGCTGGTGGACTGTGAGGTGGTGACA---GACTTGTCCGGGGCCCTAGGCATGTTGTGGCTGCTGCGGGGGCGGCAC------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071384 92 - 120421639 TCGGTGCGCAAGCGCAGTCTGTCGCTGGGGCTTGCG--------GGAAGGCA--------------GACATGGCCGGGGTTGGCGCAGTTTCGAGGCTTCTTCGCGGGCGGCGC------ i mm10.chr13 C 0 I 1 s canFam3.chr34 30159355 103 - 42124431 -AGATGCGCAGGCGCAGTGTGGCGCGGGGGTTGGTG--------GGACAGCGCGGTGGAGG--ACAGACATGTCGGGGGTCCGGGCGGTGTCTCGGCTGCTGGGCGCCCGGCGC------ i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 528142 103 + 913073 -TGGTGCGCAGGCGCCGTGGGGCGCGGAGGCTGGCC--------AGCTTACGCTGTAGCGG--GCAGACATGTCGGGGGCCCGAGTGGTGTCGCGGCTGTTGCGTGCCCGGCTC------ i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e cerAty1.NW_012004452v1 174003 458 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=859729.000000 s hg38.chr3_KI270779v1_alt 28644 193 + 205312 CTGGCGCTGG-CCAAGGCGGTGAGTCCCTGCCgcggaccggggcagggca--ggcggggggcgaggcggcggtaggagcgggacggtcccc-agcgggtccgagcgga-gc-gggcgccgg--------gTGCCCGCG-CCCCCTGC----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGAG----CCGCGGAGTGT s panTro5.chr3 200021632 189 + 202621043 -TGGCGCTGG-CCAAGGCGGTGAGTCCCTGCCGCGGACTGGGGCAGGGCA--GGCGGGGGGCGAGGCGGCGGTAGGAGCGGGACGGTCCCC-AGCGGGTCCGAGCGGA-GC-GGGCGCCGG--------GTCCCCGCG-CCCCCTGC----CCGGGGATCGGGAAGGGGCTGGGAGAG-CCTGGGCGGGTG-GCGGGGGAG-----CGCGGAGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3231 186 + 190779 --------GG-CCAAGGCGGTGAGTCCCTGCCGCGGACTggggcagggca--ggcggggggcgaggcggcggtaggagcgggacggtccccaagcgggtccgagcgga-gc-gggcgccgg--------gTCCCCGCG-CCCCCTGC----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGAG----CCGCGGAGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 852987 193 - 880730 ctggcgctgg-ccaaggcggtgagtccctgccgcggagc-ggcCAGGGAA--GGCGGGGGGCGAGGCGGCGGTAGGAGCGGGACGGTCCCC-AGCGGGTCCGAGCGGA-GCGGGGCGCCGG--------GTCCCCGCG-CCCCTTGC----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGAG----CCGCGGAGTGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191574 201 + 180051392 CTGGCGCTGG-CCAAGGCGGTCAGTCCGTACCGCGGACCGGGGCGGGACA--GGCGGGGGCCGAGGCGGCGGTAGGAGCGGGACGGTCCCC-AGCGGGTGCGAGCGGA-GC-GGGCGCCGGGTCCCCGCGCCCCCGCG-CCCCCGGT----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGCGGAG----CCGCGGGGCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256165 201 - 181584905 CTGGCGCTGG-CCAAGGCGGTCAGTCCGTACCGCGGACCGGGGCGGGACA--GGCGGGGGCCGAGGCGGCGGTAGGAGCGGGACGGTCCCC-AGCGGGTGCGAGCGGA-Gc-gggcgccgggtccccgcgcccccgcg-cccccggt----ccggggATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGCGGAG----CCGCGGGGCGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174461 193 + 218577 CTGGCGCTGGCCCAAGGCGGTCAGTCCGTACCGCGGACCGGGGCGGGGCAACGGCGGGGGCCG-GGCGGCGTAGAGAGCGGGCAGGTCCCC-AGCGGGTGCGAGCGGA-GC-GGGCGCCGGG-------GTCCCCGCG-CCCCGGGT----CC-GGGATCGGGAAGGGGCTGGGAGAGCCT--GGCCGGTGCGAGGCGGAG----CCGAAGGCCGG i cerAty1.NW_012004452v1 I 458 C 0 s chlSab2.chr4 89588831 201 - 91010382 ctggcgctgg-cCAAGGCGGTCAGTCCGTACCgcggaccggggcgggaca--ggagggggccgaggcggcggtaggagcgggacggtcccc-agcggatgcgagcgga-gc-gggcgccgggtccccgcggccccgcg-cccccggt----cccgggATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGAG----CCGCGGGGCGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137781 193 - 204313951 CTGGCGCTGG-CCAAGGCAGTGAGTCCGTGCCGCGGACCGGGGCGGGGCA--GGCAGGGGCCGAGGCAGCAGTAGGAGCGGGTCGGTCCAC-AGCGGGTCCGAGCGGA-TC-GAGCGCCGG--------GTCCCCGCA-CCCCCTGC----CCGGGGATCCGGAAGGGGCTGAGAGAGCCCTGGGCCGGTGCGAGGGGGAG----CAgcggggcgg i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199234 193 + 306014 CTGGCGCTGG-CCAAGGCAGTGAGTCCGTGCCGCGGACCGGGGAGGGGCA--GGCGGGGGCCGGGGCAGCAGTAGGAGCGGGCGGGTCCCC-AGCGGGTCCGAGCGGA-TC-GAGCGCCGG--------GTCCCCGCG-CCCCCTGC----CCGGGGATCCGGAAAGGGCTGAGAGAGCCCTGGGCCGGTGCGAGGGGGAG----CAGCGGGGCGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 64020 193 + 211231 CTGGCGCTGG-CCAAGGCCGTGAGTCCGTGCCGCGGACCGGGGCGGGGCA--GGCGGGGGCCGAGGCAGCAGTAGGAGCGGGCCGGTCCCC-AGCGGGTCCGAGCGGA-TC-GAGCGCCGG--------GTCCCCGCG-CCCCCTGC----CCGGGGATCCGGGAGGGGCTGAGAGAGCCCTGGGCCGGTGCGAGGCGGAG----CAGCGGGGCGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 28258 110 + 2165740 CTGGCCCTGA-CCAGGAAGGTGAGTTGACGCCGCGAGGTGG-----------GGCGGGGGCCGAGGCGGCGGAGGGAGCGGGACAATCCCT-ACCGGGTGTAGGCGCA-CC---------------------------------------------------------------AAAGCCT---GCTGGT-------------------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071477 105 - 120421639 -TGGCGTTAA-CTGGGGCGGTGAGTTAGTGCCACGAAATGG-------CA--GGCG---------------------------------CT-AG---------------GA-GTGCGCCAC--------GATTCCACC-CGAGTTGG----CCTGAGTCTGGGAAGGTGCAG---------TGGGCCG---------------------------- i mm10.chr13 I 1 C 0 s canFam3.chr34 30159458 180 - 42124431 CTGGCGCTGA-CCAGAGCAGTGAGTCTTCGCCGCGGAGCGGGCAGGG-----TGCGGGGATCGAGGGGG------GCGCAGGACGGTCTCC--GCGGGCCCGAGCGGACGC-GAGTgcccc--------g-ccccgcc-ccgcccgcagggccccggccTGGGGAGGGTCTG---------CGGGCGGGTGCGGGGAGGAGGTCGCCGGAGGGT-- i canFam3.chr34 C 0 I 6 s dasNov3.JH577625 528245 168 + 913073 CTGGCGCTGA-CCAGAGCGGTGAG-CGGCGCCGCGGGGCGGGT--GGACA--TGCGGGGGCCGAGGCGGCC-----------ACAGTCCCT-TGTGGAACAGAGC----TC-G----------------GTCCCCGTGCCCCCCCGT----CCCCGGGTCGGGACGCGGCGGCGAAGGGTCTGGG--GACGCGGAGCGGAG---CCCGCGGGGTTG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e manLeu1.NW_012107609v1 21408 1390 + 930449 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=600960.000000 s hg38.chr3_KI270779v1_alt 28837 141 + 205312 ACT--CGGGGGCCTGGGGAGCTC-GGTCCTTAGCAGGTA----GGCCGCGTCCCGGTG-AAGGTCGCGACCCCGCGGGCTTGCT------GGGCGTCCCCTCCG-CCGCTTT-G--G-TC-CGGGCCTGGGGTCCGGCGAC-CTCGCGGGCTGAGGTAGCC-C s panTro5.chr3 200021821 143 + 202621043 ACTA-CGGGGGCCTGGGGAGCTC--GTCCTTAGCAGGTA---GGGCCGCGTCGCGGTGAAAGGTCGCGA-CCCGC-GGCTTGCT-------GGCGTCCCCTCCGCCCGCTTTGG--G-TCGCGGGCCTGGGGTCCGGCGAC-CTCGCGGGCTGAGGTAGCT-C i panTro5.chr3 C 0 I 2 s panPan2.chrUn_NW_014024201v1 3417 141 + 190779 ACT--CGGGGGCCTGGGGAGCTC-GGTCCTTAGCAGGTA----GGCCGCGTCCCGGTG-AAGGTCGCGACCCCGCGGGCTTGCT------GGGCGTCCCCTCCG-CCGCTTT-G--G-TC-CGGGCCTGGGGTCCGGCGAC-CTCGCGGGCTGAGGTAGTT-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853180 140 - 880730 ACT--CGGGGGCCTGGGGAGCTC-GGTCCTAAGCAGGTA----GTCCGCGTCCC-GTG-AAGGTCACGACCCCGCGGGCTTGCT------GGGCGTCCCCTCCG-CCGCTTT-G--G-TC-CCGGCCTGGGGTCCGGCGAC-CTCGCGGGCTGAGGTAGCC-C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191775 140 + 180051392 ACT--CGGGGAACCGGGGAGCTC-GGTCCTTAGCAGGTA----GTCCGCGTCCCGGTG-AAGGTCACGACCCCGCGGGCTTTCT------GGTCGTCCGCTCTG-CTGCCTT-G--G-TC-CGGGCCT-GGGTCCGGGAAC-CCCGCGGGCTGAGGTGGCG-C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256366 140 - 181584905 ACT--CGGGGAACCGGGGAGCTC-GGTCCTTAGCAGGTA----GTCCGCGTCCCGGTG-AAGGTCACGACCCCGCGGGCTTGCT------GGTTGTCCGCTCTG-CCGCCTT-G--G-TC-CGGGCCT-GGGTCCGGGAAC-CCCGCGGGCTGAGGTGGCC-C i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174654 136 + 218577 ACT--C-GGGAACCGGGCAGCTCAGGTCCTTAGCAGGTA----GTCCGCGTCCCGGTG-AAGGTCACGACCCTGCGG--CTGCT------AGTGCCTCCCTCTG-CCGCCTT-G--G-TC-CGGCCCT-GGGTCCGGAACCACCCGCGGGCTGAGGTGG---- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589032 140 - 91010382 ACT--CGGGGGACCGGGGAGCTC-GGTCCTTAGCAGGTA----GTCCGCGTCCCGGTG-AAGGTCACGACCCCGCGGGCTTGCT------GGTCGTCGCCTCTG-CCGCCTT-G--G-TC-CGGGCCT-GGGTCCGGGGAC-CCCGCGGGCTGAGGTGGCT-C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 22806 140 + 930449 ACT--CGGGGAACCGGGGAGCTC-GGTCCTTAGCAGGTA----GTCCGCGTCCCGGTG-AAGGTCACGACCCTGCGGGCTTGCT------AGTCGTCCCCTCTG-CCGCCTT-G--G-TC-CGGGCCT-GGGTCCGGGAAC-CCCGCGGGCTGAGGTGGCC-C i manLeu1.NW_012107609v1 M 1390 C 0 s calJac3.chr2 137974 147 - 204313951 acc--cgggggccggggggggTC-AGTCCTTAGCAAGTC----GTCCGCCTCCCGGTG-AAGGTCACGACCCCACGGGC-TGCTCGGCCCGGGGGTCCCCTCCG-CCGCACT-G--G-TC-CGGGCCTGGGGTCCGGGGAC-CCCGCGGGCTGAGGTAGCCAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199427 142 + 306014 ACC--CGGGGTCC---GGGGGTC-ATTCCTTAGCAGGTC----GTGCGCATCCCGGTG-AAGGTCACGACCCCACGGGC-TGCTCGGCCCGGGGGTCCCTTCCG--CGCACT-G--G-TC-CGGGCCTGGGGCCCGGGGAC-CCCGCGGGCTGAGGTAGCC-C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 64213 145 + 211231 ACC--CGGGGGCC-CGGGGGCTC-AGTCCTTAGCAGGTC----GTCCGCGTCCCGGTG-AAGGTCACGACCCCACGGGC-GGCTCGGCCCGGCGGTCCCCTCCG-CCGCCCT-G--G-TC-CGGGCCT-GGGTCCGGGGAC-CCCGCGGGCTGAGGTAGCGCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 28368 88 + 2165740 ----------------------------------CGGCC----CGCTGCGCCCGGGTG-AAGGTCACGACCT----------CT---------------------CCGCTTT-GGAG-TC-CAGGCTTGGCGTCCGGAGGC-CTCGCGGGCTGAGTCGCCC-C i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071582 62 - 120421639 ----------------------------------AAGCC----GACTGCTTTCCGGCG-AAGGTCACGACCCCGA--------------------------------------G--G-TCGCGGGCGTGGAGTCTGG---C-CTT-----------------C i mm10.chr13 C 0 C 0 s canFam3.chr34 30159644 143 - 42124431 ACC--CGCAGGGCAGCGGG---C-AGTTTCCAGGAGCCCGCGGGTCTGCGTCCCTGTG-AAGGTCATGACCCCGCGTGCCGCCC------CGGGGACGCTTCCG-CTGCCTG-G--GATC-CAGGCCTGGGGGCCGGGGGC-CTCGCGGGCTACGGTCGCT-C i canFam3.chr34 I 6 I 431 s dasNov3.JH577625 528413 116 + 913073 ---ACCGGAGGCTGCCGGAGCCC-GGTGCT-------------GAC-----CCCGGTG-AAGGTCACCGCCCAGC---------------GGGACCCCGCTCCC-CCGCGA--G--G-TC-TAGGCCTGGAGCCGGGAGGG-CCCGCGCGCCAAGGTCGCC-C i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=188389.000000 s hg38.chr3_KI270779v1_alt 28978 32 + 205312 CTCGCCTC--TGCCTGGCGGGTGGACTCGGGGAG s panTro5.chr3 200021966 32 + 202621043 CTCGCCTCAGTGCCTGGCGG--TGACTCGGGGAG i panTro5.chr3 I 2 C 0 s panPan2.chrUn_NW_014024201v1 3558 34 + 190779 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853320 34 - 880730 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191915 34 + 180051392 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256506 34 - 181584905 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174790 34 + 218577 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589172 34 - 91010382 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 22946 34 + 930449 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138121 34 - 204313951 CCCGCCTCAGTGCCTGGCTCGTGGACTCGGGGAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199569 34 + 306014 CCCGCCTCCGTGCCTGGCGCGTGGACTCGGGGAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 64358 34 + 211231 CCCGCCTCAGTGCCTGGCGCGTGGACTCGGGGAG i aotNan1.NW_018494784v1 C 0 I 381 s otoGar3.GL873745 28456 31 + 2165740 CT--CCTTAGT-CTTAGTGCGTGGCCAAGGGGAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071644 17 - 120421639 CCCGTCTTGGT--CTAGCG--------------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528529 31 + 913073 CCAGGCTCGGTTCCGGGTG-GCGCCCTAGGGG-- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=120629.000000 s hg38.chr3_KI270779v1_alt 29010 27 + 205312 GAGTCG-TGTCTG-CCC-AAGGTCACCGGG- s panTro5.chr3 200021998 27 + 202621043 GAGTCG-TGTCTG-CCCAAAGGTCACC-GG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3592 27 + 190779 GAGTCG-TGTCTG-CCC-GAGGTCACCGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853354 27 - 880730 GAGTCG-TGTCTG-CCC-AGGGTCACCGGG- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191949 27 + 180051392 GAGTCG-TGTCTG-CCC-AAGGTCACTCGG- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256540 27 - 181584905 GAGTCG-TGTCTG-CCC-AAGGTCACTCGG- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174824 29 + 218577 GAGTCGTTGTCTGCCCC-AAGGTCACTCGG- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589206 27 - 91010382 GAGTCG-TCTCTG-CCC-AAGGTCACCCGG- i chlSab2.chr4 C 0 I 20 s manLeu1.NW_012107609v1 22980 27 + 930449 GAGTCG-TCTCTG-CCC-AAGGTCACCCGG- i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138155 27 - 204313951 GAGTGG-TGTTTG-CCC-AAGGTCAACCGG- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199603 27 + 306014 GAGTGG-TGTCTG-CCC-AAGGTGACCCGG- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28487 26 + 2165740 GAGCCC-TGTCT--CCC-AAGGTCACTGGG- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071661 21 - 120421639 AAGTTC--------TCC-AAGGTTAAAGGG- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528560 26 + 913073 GAGACG---TTGG-CCC-AAGGTCACACGGG i dasNov3.JH577625 C 0 I 3 e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=17975.000000 s hg38.chr3_KI270779v1_alt 29037 5 + 205312 GTGGA s panTro5.chr3 200022025 5 + 202621043 GTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3619 5 + 190779 GTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853381 5 - 880730 GTGGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191976 5 + 180051392 GCGGA i rheMac8.chr6 C 0 I 15 s macFas5.chr6 180256567 5 - 181584905 GCGGA i macFas5.chr6 C 0 I 15 s cerAty1.NW_012004452v1 174853 5 + 218577 GCGGA i cerAty1.NW_012004452v1 C 0 I 12 s manLeu1.NW_012107609v1 23007 5 + 930449 GCGGA i manLeu1.NW_012107609v1 C 0 I 15 s calJac3.chr2 138182 5 - 204313951 GCGTA i calJac3.chr2 C 0 I 15 s cebCap1.NW_016108150v1 199630 5 + 306014 GCGGA i cebCap1.NW_016108150v1 C 0 I 15 s otoGar3.GL873745 28513 4 + 2165740 -CGGG i otoGar3.GL873745 C 0 I 1 s mm10.chr13 46071682 1 - 120421639 ----A i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528589 5 + 913073 GTAGC i dasNov3.JH577625 I 3 C 0 e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e chlSab2.chr4 89589233 20 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=5500.000000 s hg38.chr3_KI270779v1_alt 29042 1 + 205312 G s panTro5.chr3 200022030 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3624 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853386 1 - 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191996 1 + 180051392 G i rheMac8.chr6 I 15 C 0 s macFas5.chr6 180256587 1 - 181584905 G i macFas5.chr6 I 15 C 0 s manLeu1.NW_012107609v1 23027 1 + 930449 G i manLeu1.NW_012107609v1 I 15 C 0 s calJac3.chr2 138202 1 - 204313951 G i calJac3.chr2 I 15 C 0 s cebCap1.NW_016108150v1 199650 1 + 306014 G i cebCap1.NW_016108150v1 I 15 C 0 s otoGar3.GL873745 28518 1 + 2165740 G i otoGar3.GL873745 I 1 C 0 s dasNov3.JH577625 528594 1 + 913073 G i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46071683 0 - 120421639 C e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e chlSab2.chr4 89589233 20 - 91010382 I e cerAty1.NW_012004452v1 174858 12 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=84469.000000 s hg38.chr3_KI270779v1_alt 29043 21 + 205312 -TCCTGGCTGGGCCGGGCCTCT s panTro5.chr3 200022031 21 + 202621043 -TCCTGGCTGGGCCGGGCCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3625 21 + 190779 -TCCTGGCTGGGCCGGGCCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853387 21 - 880730 -TCCTGGCTGGGCCGGGCCTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 191997 21 + 180051392 -TCCTGGCTGGGCTGGGCCTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256588 21 - 181584905 -TCCTGGCTGGGCTGGGCCTCT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89589253 21 - 91010382 -TCCTGGCTGGGCTGGGCCTCT i chlSab2.chr4 I 20 C 0 s manLeu1.NW_012107609v1 23028 21 + 930449 -TCCTGGCTGGGCTGGGCCTCT i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138203 21 - 204313951 -CCCTGACTGGGCCGGGCCTCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199651 21 + 306014 -CCCTGGCTGCGCCGGGCCTCT i cebCap1.NW_016108150v1 C 0 C 0 s mm10.chr13 46071683 13 - 120421639 ---------GGGACCGGCCTGT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528595 22 + 913073 GCCTTGTGGCGTCCAGGCCACC i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 28519 0 + 2165740 C e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e cerAty1.NW_012004452v1 174858 12 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=145822.000000 s hg38.chr3_KI270779v1_alt 29064 80 + 205312 -------GCCGCCCTCTG--------TGAGGGT----TGTCCTGCGGGGCCGCCCGCAGCCCGTGGGTG-GGGCCGGC-GG---GGCG-GGTGAAACCG----CCTGGG- s panTro5.chr3 200022052 79 + 202621043 -------G-CGCCTCGTG--------TGA-GGT----TGTCCTG-AGGGCCGCCCGCAGCCCGTGGGT--GGGCTGGCGGG---GGCGAGGTGAAACGG---CCCCGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3646 80 + 190779 -------GCCGCCCTCTG--------TGAGGGT----TGTCCTGAGGGGCCGCCCGCAGCCCGTGGGTG-GGGCTGGC-GG---GGCG-GGTGAAACCG----CCCGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853408 81 - 880730 -------GCCGCCCTCTG--------TGAGGGT----TGTCCTGAGGGGCCGCCCGCAGCCCGTGGGTGAGGGCTGGC-GG---GGCG-GGTGAAACCG----CCCGGG- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192018 80 + 180051392 -------GCCGCCCTCTG--------TGCGGGT----TGTCCCGAGGGGCCGCCCGCAGCCCGTGGGTG-TGGCGGGC-GG---GGCG-GGTGAAACCG----CCCGGG- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256609 80 - 181584905 -------GCCGCCCTCTG--------TGCGGGT----TGTCCCGAGGGGCCGCCCGCAGCCCGTGGGTG-TGGCGGGC-GG---GGCG-GGTGAAACCG----CCCGGG- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174870 77 + 218577 -------GGCGTCCTCTG--------TGC-GGT----TGTCTCCGAGGGCCGCCCGCAG-CCGTGGGTG--GGCGGGC-GG---GACG-GGTGAAACCG----CCCGGG- i cerAty1.NW_012004452v1 I 12 C 0 s chlSab2.chr4 89589274 80 - 91010382 -------GCCGCCCTCTG--------TGCGGGT----TGTCCCGAGGGGCTGCCCGCAGCCCGTGGGTG-GGGCGGGC-GG---GGCG-GGTGAAACCA----CCCGGA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23049 80 + 930449 -------GCCGCCCTCTG--------TGCAGGT----TGTCCCGAGGGGCCGCCCGCAGCCAGTGGGTG-GGGCGGGC-GG---GGCG-GGTGAAACCG----CCCGGG- i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138224 63 - 204313951 -------GCCGCCTGTTG--------TGCTGGTTGTCTGTC-------------------CCGCAGGTG-GGGCGGAC-GG---GGCG-GGTGCAGTGG----CCGG--- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 199672 59 + 306014 -------GCCGCCGGTTG--------TGCGGGT----TGTC-------------------CCGCGGGTG-GGGCCGCC-GG---CGTC-GGTGCGGGGG----CCGG--- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28519 65 + 2165740 -------GCCGCC--------------AAGGGC----TGTGC----GGGCTGGCCGTGG--CGTGGTCG-GGGCTCGC-CG---CG-G-GGCGGCAGGG----CCCT--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071696 49 - 120421639 ---------TGCATTCTG------GATGCGGAC------------GGGTCTGCGAGTAATCCGTTGGTA-GTCTGGG--------------------------------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528617 103 + 913073 ACCCAAAACCGCCCTTAGACCTCAGGCGGAGGC----GGGCCCGCGAGCGGAGGCGCGGCGCTCGGCAG-TTTCTCGC-GGCTAATCC-GGTTAACCTGCAGCCTCGGGG i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=60337.000000 s hg38.chr3_KI270779v1_alt 29144 20 + 205312 TGGGTGCG-AGG----------AGTGGCCGG s panTro5.chr3 200022131 21 + 202621043 TGGGTGCGAAGG----------AGTGGGCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3726 20 + 190779 TGGGTGCG-AGG----------AGTGGCCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853489 20 - 880730 TGGGTGCG-AGG----------AGTGGCCGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192098 20 + 180051392 TGGGTGCG-AGG----------AGTGGCCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256689 20 - 181584905 TGGGTGCG-AGG----------AGTGGCCGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174947 20 + 218577 TGGTGGCG-AGG----------AGTGGGCGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589354 20 - 91010382 TGGGTGCG-AGG----------AGTGGCCGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23129 20 + 930449 TGGGTGCG-AGG----------AGTGGCCGG i manLeu1.NW_012107609v1 C 0 C 0 s otoGar3.GL873745 28584 12 + 2165740 ---------AAG----------ACTACCCGG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 528720 23 + 913073 -------G-AGGTTCGCCTGCCGGTCGCCGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46071745 0 - 120421639 C e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e cebCap1.NW_016108150v1 199731 0 + 306014 C e macNem1.NW_012013899v1 86946 69845 - 100774 T e calJac3.chr2 138287 0 - 204313951 C e saiBol1.JH378155 99259 907 - 16417988 M e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=33880.000000 s hg38.chr3_KI270779v1_alt 29164 18 + 205312 GCTCGGCCGGG-TGGGTGT s panTro5.chr3 200022152 17 + 202621043 G-TCGGCCGGG-TGGGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3746 18 + 190779 GCTCGGCCGGG-TGGGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853509 18 - 880730 GCTCGGCCGGG-TGGGTGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192118 17 + 180051392 GCTCGGCC-AG-TGGGCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256709 17 - 181584905 GCTCGGCC-AG-TGGGCGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 174967 18 + 218577 GCTCGACCGGG-TTGGCGC i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 89589374 18 - 91010382 GCTAGGCCGCG-TGGGCGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23149 18 + 930449 GCTCGACCGGG-TGGGCGT i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138287 19 - 204313951 GCTCCACCCGGCCGGGCGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100166 19 - 16417988 GCTCCGCCGGGCCGGGCGT i saiBol1.JH378155 M 907 C 0 s cebCap1.NW_016108150v1 199731 19 + 306014 GCTCGACCGGGCCGGGCGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28596 1 + 2165740 -----------------G- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 528743 17 + 913073 GCCTGTCCTTTCCGGGC-- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46071745 0 - 120421639 C e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e macNem1.NW_012013899v1 86946 69845 - 100774 T e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=375464.000000 s hg38.chr3_KI270779v1_alt 29182 70 + 205312 CCGGTGGG--AAGC--GCGGCGCG-CC-CGA-GCTTGGGCTTGCAGTTCCC----------------------------------------------CTTTCCAG-AGAGCGCAAATCTGTGCA s panTro5.chr3 200022169 71 + 202621043 CCGGTGGG--AAGCGGGGGGCGCG-CC-CGAGGCTTGGGCTTGC-GTTCCC----------------------------------------------CTTTCTAG-AAGGCGC-AATCTGTGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 3764 70 + 190779 CCGGTGGG--AAGC--GCGGCGCG-CC-CGA-GCTTGGGCTTGCAGTTCCC----------------------------------------------CTTTCCAG-AAAGCGCAAATCTGTGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853527 71 - 880730 CCGGTGGG--AAGC--GCGGCGCGCCC-CGA-GCTTGGGCTTGCATTTCCC----------------------------------------------CTTTCCAG-AAAGCGCAAATCTGTGCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192135 71 + 180051392 CCGGTGGG--AAGA--GCTGCGCG-CC-CGA-GCTTGGGCTTGCAGTTCCG----------------------------------------------CTTTCCAGAAAAGCGCAAATCTGTGCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256726 71 - 181584905 CCGGTGGG--AAGA--GCTGCGCG-CC-CGA-GCTTAGGCTTGCAGTTCCG----------------------------------------------CTTTCCAGAAAAGCGCAAATCTGTGCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17101 71 - 100774 CCGGTGGG--AATT--GCTGCGCG-CC-CGA-GCTTGGGCTTGCAGTTCCG----------------------------------------------CTTTCCAGAAAAGCGCAAATCTGTGCG i macNem1.NW_012013899v1 T 69845 C 0 s cerAty1.NW_012004452v1 174986 71 + 218577 TCGGT-GG--AATT--GCTGCGCG-CC-CAAGGCTTAGGCTTGCAGTTCCG----------------------------------------------CTTTCCAGAAAAGCGCAAATCTGTGCG i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 89589392 71 - 91010382 CCGGTGGG--AAGC--GCTGCGCG-CC-CGA-GCTTAGGCTTGCAGTTCCG----------------------------------------------CTTTCCAGAAAAGCGCAAATCTGTGCG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23167 70 + 930449 CCGGTGGG--AAGC--GCTGCGCG-CC-CGA-GCTTGGGCTTGCAGTTCCG----------------------------------------------CTTTCCAG-AAAGCGCAAATCTGTGCG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138306 70 - 204313951 CGGGCGGG--AAGC--GCGGCGCG-CC-AGA-GCTTGGGCCTGCAGTTCCC----------------------------------------------CTTTCCAG-AAAGCGCAAATCTGTGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100185 70 - 16417988 CGGGCGGG--AAGC--GCCGCGCG-CC-GGA-GCTTGGGCCTGCAGTTCCC----------------------------------------------CTTCCCAG-AAAGCGCAGATCTGTGCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 199750 70 + 306014 CGGGCGGG--AAGC--GCCGCGCG-CC-GGG-GCCTGGGCCTGCGGTTCCC----------------------------------------------CTTCCCCG-AAAGCGCAAATCTGTGCA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28597 39 + 2165740 ---GTGGG--ATGC---------------GA-GCTTTG---------------------------------------------------------------CGAG-AAGGCGCAAATCTACGCG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 528760 119 + 913073 ACGGTGGGGTGAGC--ACATCAAG-CCTCCG-GCCTGGGTTCGCGAGTCTCTTCCATGTGTTCTGTGTCATTACAGCTGTTGGGAAAACGGAGCAGTCTTTCGAG-AAAGGACAAATCTGTGTA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46071745 0 - 120421639 C e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=340816.000000 s hg38.chr3_KI270779v1_alt 29252 63 + 205312 -----TGTCCA----CTT-----CGGGATCTTGGAAGTTAAGGACCTGTACTTT----GGG--TCCCG-TTTGGTGGCCCTTGT s panTro5.chr3 200022240 66 + 202621043 -----TGTCCACCCTCTT-----CGGGACCGTTGGAGTTAAGGACCTG-ACTTT----GGG--TCCTG-TTTGGTGGCCATTGT i panTro5.chr3 C 0 I 1461 s panPan2.chrUn_NW_014024201v1 3834 63 + 190779 -----TGTCCA----CTT-----CGGGACCTTGGAAGTTAAGGACCTGTACTTT----GGG--TCCTG-TTTGGTGGCCCTTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853598 63 - 880730 -----TGTCCA----CTT-----GGGGACCTTGGAAGTTAAGGACCTGTACTTT----GGG--TCCTG-TTTGGTGGCCCTTGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192206 63 + 180051392 -----TGTCCA----CTT-----CGCGACCTTGTAAGTTAAGGGTGTCAACTTT----GGG--TCGTG-TTTGGTGGCCCTTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256797 63 - 181584905 -----TGTCCA----CTT-----CGCGACCTTGTAAGTTAAGGGTGTCAACTTT----GGG--TCGTG-TTTGGTGGCCCTTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17172 63 - 100774 -----TGTCCA----CTT-----CGCGACCTTGTAAGTTAAGGGTCTCTACTTT----GGG--TCGTG-TTTGGTGGCCCTTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175057 62 + 218577 -----TGTCCA----CTT-----CGCGA-CTTGTAAGTTAAGGGTGTCAACTTT----GGG--TCGTGTTTTGGTGGCCC-TGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589463 63 - 91010382 -----TGTCCA----CTT-----CGCGACCTTGTAAGTTAAGGGTGTCAAGTTT----GGG--TCGTG-TTTGGTGGCCCTTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23237 63 + 930449 -----TGTCCA----CTT-----CGCGACCTTGTAAGTTAAGGGTGTCAACTTT----GGG--TCGTG-TTTGGTGGCCCTTGT i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138376 67 - 204313951 -----TGTCCA----CAT-----GGAGACCTTGTAAGTGAAGGGCCTCTGCTTTGCGGGGG--TGGTG-TTTGGTGGCCCTTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100255 64 - 16417988 -----TGT-CA----CAT-----CCAGACCTTGTCAGCGAAGGGCCTCTGCTTT--GGAGG--TGGTG-TTTGGCGGCCCTTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 199820 65 + 306014 -----TGTCCA----CGT-----CGAGCCCTTGTAAGTGAAGGGCCTCTGCTTT--GGCGG--CGGTG-TTTGGCGGCCCTTGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28636 65 + 2165740 -----TGTCCA----TAC-----CAAGACCATGCAAGTTGAAGCCTTTTATTTT----GGGTTTTGTG-TGTGATGGCCCTTTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071745 54 - 120421639 -----TGTCGA----CAC-----TAAGA-CTTATAAGTGATGAGCTTA-----C----AGG--TTTTG-TGTAGTGGCCTT--- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528879 71 + 913073 TATAGTATTCA----CGTACCACTGAGACCTTACAGCTTAAGGGCCTCTATTTT----GGG--TTTTA---TGCTGGCGTGTGT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=-4772.000000 s hg38.chr3_KI270779v1_alt 29315 31 + 205312 --GCCACAAA-AATGTGCCGGTGTTTAAAAGCAG s panPan2.chrUn_NW_014024201v1 3897 32 + 190779 --GCCACCAACAATGTGCCGGTGTTTAAAAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853661 32 - 880730 --GCCACCAAAAATGTGCCGGTGTTTAAAAGCAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192269 32 + 180051392 --GCCACTGAAAATGTGTCGGTGTTTACAAGCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256860 32 - 181584905 --GCCACTGAAAATGTGTCGGTGTTTACAAGCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17235 32 - 100774 --GCCACTGAAAATGTGTCGGTGTTTACAAGCAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175119 31 + 218577 --GCCACTGAAAATGTGCCAGTG-TTAAAAGCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589526 32 - 91010382 --GCCACTGAAAATGTGCCAGTGTTTAAAAGCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23300 32 + 930449 --GCCACTGAAAATGTATCAGTGTTTAAAAGCAG i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 138443 2 - 204313951 ------------------------------GC-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100319 2 - 16417988 ------------------------------GC-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 199885 2 + 306014 ------------------------------GC-- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28701 7 + 2165740 ---GCACAAA------------------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071799 2 - 120421639 -----------------------------AG--- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528950 15 + 913073 GCACGATTAGAAAAA------------------- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e colAng1.NW_012116910v1 853612 11332 + 1687011 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=944337.000000 s hg38.chr3_KI270779v1_alt 29346 166 + 205312 CTGTGCCAGTTTTTAAAAATCAGACGGAGAG-CTCAGGGCACTGACCG-------------AGCGAGGACTCCAGGACCTGTGCTTGCCTGTGCGC-----TGAG-------------TACCTCG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGATGGTCAGGGTTATACTTCCCTGA--------GCCCTTGCTCTCT-GAGT--GTCT s panPan2.chrUn_NW_014024201v1 3929 168 + 190779 CTGTGCCAGTTTTTAAAAATCAGACGGAGAG-CTCAGGGCACTGACCG-------------AGCGAGGACTCCAGGACCTGTGCTTGCCTGTGCGC-----TGAG-------------TACCTCG-A--------------------GGGC----CGGGCTGGGCTTAGTCCAGGATGATGGTCAGGGTTATACTTCCCTGA--------GCCCTTGCTCTCT-GAGTTTGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853693 162 - 880730 CTGTGCCAGTTTTAAAAAATCAGACGGAGAG-CTCAGGGCACTGACCG-------------AGCGAGGACTCCAGGAGCTGTGCTTGCCTGTGCGC-----GGAG-------------TACCTCG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGATGGTCAGGGTTATACTTCCCTGA--------GCCCTTGCTCTCT-------GTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192301 167 + 180051392 CTGTGCCAGTTTTTAAAAATCAGACGGAGAG-CTCAGCGCACTGACCG-------------GGCGAGGACGC-GGGACCGGTGCTTGCCTGTGCGC-----TGAG-------------TGCCTCG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGACGGTCAGGGTTATGCTTCCCTGA--------GCCCTCGCTCTCT-GAGTTTGTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180256892 167 - 181584905 CTGTGCCAGTTTTTAAAAATCAGACGGAGAG-CTCAGCGCACTGACCG-------------GGCGAGGACGC-GGGACCGGTGCTTGCCTGTGCGC-----TGAG-------------TGCCTCG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGACGGTCAGGGTTATGCTTCCCTGA--------GCCCTCGCTCTCT-GAGTTTGTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17267 167 - 100774 CTGTGCCAGTTTTTAAAAATCAGACGGAGAG-CTCAGCGCACTGACCG-------------GGCGAGGACAC-GGGACCGGTGCTTGCCTGTGCGC-----TGAG-------------TGCCTCG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGACGGTCAGGGTTATACTTCCCTGA--------GCCCTCGCTCTCT-GAGTTTGTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175150 164 + 218577 CTGTGCCGGTTTTTAAAAATCAGACGGAGAG-CTCAGCGCACTGACC--------------GGCGAGGACGC-GGGACCGGTGC-TGCCTGTGCGC-----TGAG-------------TGCCTCG-A---------------------GGC----CGGGCTCCGCTTCGTCCAGGATGACGGTCAGGGTTGTACTTCCCTGA--------GCCCTCGCTCTCT-GAGTTTGTCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589558 168 - 91010382 CTGTGCCCGTTTTTAAAAATCAGAGGGAGAG-CTCAGCGCACTGACCG-------------GGCGAGGACGC-GGGACCGGTGCTTGCCTGTGCGC-----TGAG-------------TGCCTCGCG--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGACGGTCAGGGTTATACTTCCCTGA--------GCCCTCACTCTCT-GAGTTTGTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23332 167 + 930449 CTGTGCCGGTTTTTAAAAATGAGACGGAGAG-CTCAGCCCACCGACCG-------------GGCGAGGACGC-GGGACCGGTGCTTGCCTGTGCGC-----TGAG-------------TGCCTCG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGACGGTCAGGGTTGTACTTCCCTGA--------GCCCTCGCTCTCT-GAGTTTGTCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 864944 166 + 1687011 CTGTACCAGTTTTTAAAAATCAGACGGAGAG-CTCAGCGCACTGACCG-------------GGCGAGGACGCTGAGACCTGTGCTTGCCTGTGCGC-----TGAG-------------TGCCTGG-A--------------------GGGC----CGGGCTCGGCTTAGTCCAGGATGATGGTCAGGGTTATACTTCCCTGA----------CCTTGCTCTCT-GAGTTTGTCT i colAng1.NW_012116910v1 I 11332 C 0 s calJac3.chr2 138445 165 - 204313951 -----GCAGTTTTTAAAAATCAGACCGAGAG-CTCCGCGCACTGACCG-------------GGCCAGGACGCCAGGACCCGTGCCTTCCCGTGCGT---TGTGAG-------------TGCCTCG-A--------------------GGGC----CGGGCTCGGACTAGTCCAGGATGAAGGGCAGGGTTATACTTCCCTGA--------TCCCTTGCTGTCT-GAGTTTGTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100321 159 - 16417988 -----GCAGTTTTCTAAAGTCAGACCGAGAG-CTCCGCGCACTGACCG-------------GGCCAGGACGCCAGGACCCGCGCCTTCCTGTGCGT---TGTGAG-------------TGCCTGG-A--------------------GGGC----CGGGCTCGGCCCAGTCCAGGATGACGGGCAGGGCCATCCTTCCCTGA--------GCCCTTGC-------AGTTTGTCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 199887 165 + 306014 -----GCAGTTTTTAAAAATCAGACGGAGAC-CTCCGCGCACTGACCG-------------GGCCGGGACGCCAGGACCCGTGCCTTCCCGTGCGT---TGTGAG-------------TGCCGCG-G--------------------GGGC----CGGGCTCGGCTCGGTCCAGGATGATGGGCAGGGTTATACTTCCCGGA--------GCCCTTGCTGTCT-GAGTTTGTCT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 28708 173 + 2165740 ----------TTTTAAAAATCAGGTGGAGAA-TTTAGGACACTGGCCG-------------GGCAGAGTGGCCAAGACCTTTGTTT--CGGAGGGA-----TGGG-------------GTCCGAG-AGGGGACGGACGGGCCTCCCTGGGC----AGAACTCGCATCAGTGGAGGGTAGTGGTCGGGGTTGTGCTTTGCTGA--------GCTCTTATTGTTTAGAGTGT---- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071801 161 - 120421639 ---CTACTGTTTTTAAATATCAAAGAGATAT-TTGAAGATA----CCA-------------GGTGAGACTTC-TGCACCG---------TGTTCAT-----CCAG-------------TCTTGCG-A--------------------CTTCTTTTTGCATTTGAAGAGGTACACAGTGAC--TCAGGGTTGCAGGGGTCTGATGTTGGCCTCCCAGATTGTCA-GATCTTGTCT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 528965 170 + 913073 --------------AAAAAAAAGACCGAAAATTTCTGCATACTGGTTGCAAAATCACGTTTGGGGAGGACACGGAGAAGTTTGATTTTCTGTACGTGTCCACGAGGAGATGAAGATGTTCCTCCT-G--------------------GTAC----CTCCCTCGGGCTAGTGGAGAATGATGG-------------TACTTGA-----------CTTGGTACTT-GATTAGGTCT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e aotNan1.NW_018494784v1 64392 381 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=1021414.000000 s hg38.chr3_KI270779v1_alt 29512 126 + 205312 GAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGATTTCATTTAATCAAGCGAAATTGGATAGGTTTAGTTGTTTGGTTCTTTTAAATGAACTTAGCCACCCACCTC-TTAATTACA s panPan2.chrUn_NW_014024201v1 4097 127 + 190779 GAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGATTTTATTTAATCAAGCGAAATTGGATAGGTTTAGTTGTTTGGTTCTTTTAAATGAACTTACCCACCCACCTCCTTAATTACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853855 127 - 880730 GAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGATTTTATTTAATCAAGCGAAATTGGATAGGTTTAGTTGTTTGGTTCTTTTAAATGAACTTACCCAGCCACCTCCTTAATTACA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192468 127 + 180051392 GAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257059 127 - 181584905 GAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17434 127 - 100774 GAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175314 126 + 218577 GAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAATT-GATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACG i cerAty1.NW_012004452v1 C 0 I 258 s chlSab2.chr4 89589726 127 - 91010382 GAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAACTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23499 127 + 930449 GAATGTGCCCTCCA-CGATTGCATCTTCAGAATTGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCACCTTAATTACG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865110 127 + 1687011 GAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTCGTTAATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 138610 123 - 204313951 GAATGTGCCCTCTG-CTATTGCCTCTTCAGAATCGGCCTTCTAGGGTTTTATTTAATCAAGGTAAATTTGATAGGTTTAGTTATTTGGTTCTTTGAAATGAACTTACCCACCCA----CTTAATTACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100480 127 - 16417988 GAATGTGCCCTCTT-CGCTTGCATCTTCAGAATCGGCCTTCTAGGGTTTTATTTAATCAAGCTAAATTTGATAGGTTTAGTTATTTGGTTCTTTGAAATGAACTTACCCACCTACTTCCTTAATTACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200052 127 + 306014 GAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTATTTAATCAAGCTAAATTTGATTGGTTTAGTTATTTGGTTCTTTGAAATGAACTTACCCACCCACTTCCTTAATTACG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 64773 127 + 211231 GAATGTGCCCTCGG-CGATCGCGTCTTCAGAATCGGCCCGCGAGGGTTTTATTTACTCAAGCTAAATTTGATCGGTTTAGTTACTTGGTTCTTTGGAATGAACTTACCCGCCCACTTCCTTAATTACA i aotNan1.NW_018494784v1 I 381 C 0 s otoGar3.GL873745 28881 104 + 2165740 -------------A-AGGTGACATCTTCAGAATGGACCTTTTAGGAGTTTATTTACTCATGCTAAATTTGAAAGGCTTAATTA--------TTTTAAATGAACTCACGCACCCAGCCACTTAGTAT-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46071962 111 - 120421639 CAGTGCACTCTTTGCCGGTCACCTGTTATTCGTCACACTCCTAGGGTTTTATTAACGTAAACTAAATTTGACAGGTT--------GGGTTCTTTAAAGTT--CTGTCTCACCTACCTACTT------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 529135 106 + 913073 GAATGTATTCTTTA-CAATTATATCTTCAAAATTAA-CTTTTAGGATTTTAAGCAACTAAATTGAA------AGGTTTTGTTATTTGGTT-----AAATAAAATTGC-CACCCACCTACT-------- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=710456.000000 s hg38.chr3_KI270779v1_alt 29638 83 + 205312 AAGTAATTTTAAATTGCAGAGTAAAAATCTCAATAGAGGAACCAAGGCATTCAGCAATATTGA-TTTGAATTATGCCTGTGATT s panPan2.chrUn_NW_014024201v1 4224 81 + 190779 TAGTAATTTTAAATTGCAGAGTAAAAATCTCAATAG--GAACCAAGGCATTCAGCAATATTGA-TTTGAGTTATGCCTGTGATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 853982 81 - 880730 AAGTAATTTTAAATTGCAGAGTAGAAATCTCAATAG--GAACCAAGGCATTCAGCAATATTGA-TTTGAGTTATGCCTGTGATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192595 81 + 180051392 AAGTAATTTTAAATTGCAGAGTAAAAATGTCAGTAG--GAACCAAGGCATTCAGCAATATTGA-TTTGAATTATGTCTATAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257186 81 - 181584905 AAGTAATTTTAAATTGCAGAGTAAAAATGTCAATAG--GAACCAAGGCATTCAGCAATATTGA-TTTGAATTATGTCTATAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17561 81 - 100774 AAGTAATTTTAAATTGCAGAGTAAAAATGTCAGTAG--GAACCAAGGCATTCAGCAATATTGA-TTTGAATTATGTCTGTAATT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175698 79 + 218577 AAGTAATTTTAAATTGCAGAGT-AAAGTGTCAGTAG--GAACCAAGGCATTCAGCAATATTGATTTTGAATTA--CCTGTAATT i cerAty1.NW_012004452v1 I 258 C 0 s chlSab2.chr4 89589853 81 - 91010382 AAGTAATTTTAAATTGCAGAGTAAAAACGTCAATAG--GAACCAAGGCATTCAGCAATATTGA-TTTAAATTATGCCTGTAATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23626 81 + 930449 AAGTAATTTTAAATTGCAGAGTAAAAATGTCAATAG--GAACCAGGGCATTCAGCAATATTGA-TTTGAATTATGCCTGTAATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865237 81 + 1687011 AAGTAATTTTAAATTGCAAAGTAAAATTCTCAATGG--GAACCAAGGCATTCAGCAATATTGA-TTTGAATTATGCCTGTAATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 138733 81 - 204313951 AAGTAATTTTAAATTGCAGAGTAAAAATGTCAGTAG--GAACCAAGGCATTCAGGAATATTGA-TTTGAAATATGCCTGTAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100607 81 - 16417988 AAGTAATTTTAAATTGCAGAGTAAAAATCTCAGTAG--GAACGAAGGCATTCAGGAATATTGA-TTTGAATTATGCCTGTAATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200179 81 + 306014 AAGTAATTTTAAATTGCAGAGTAAAAATCTCAGTAG--GAACGAAGGCATTCAGGAATATTGA-TTTGAATTATGCCTGTAATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 64900 81 + 211231 AAGTAATTTTAAATTGCAGAGTAAAAATCTCAGTAG--GAACCAAGGCATTCGGGAATATTGA-TTTGACTTATGCCTGTAATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 28985 70 + 2165740 -----------AATTACAAAGTAAAAGTTCCAGTAG--GAACCGGAGTGTCCTACAATACACA-TTTGAATTATCCGTGTAATT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46072073 68 - 120421639 -AACAATTT--AATTACAAAGTAAA----------G--GCCCTAAGACATTGAACAGTATCGA-CTTGCATTGTGCATCAAATT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 529241 77 + 913073 TAGTAATT---AATTAGAAAGCTGAAGTCCCAATAG--GAACCAAGGCATTCAACAATATTGG-CTTGAATTATGCCAATAGT- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=1234102.000000 s hg38.chr3_KI270779v1_alt 29721 209 + 205312 G----TGCAATTTTCT---CCTTTTTGAAAT--AGTTATTGAAAATCTCTTTGAATTAAATGT--G---AGGATTAGTCAT-ACAGCCATCCTGTCAACATCGGAAAGC-GTGTAAACCGTTCTAGCGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCCGC------ATCTTGGGCTCTTAG--GAGCTGCTGGGAGGGCGTCCACAAGCAGG-----AGG--TGAAGCCC s panPan2.chrUn_NW_014024201v1 4305 207 + 190779 G----TGCAATTTTCT---CCTTTTGGAAAT--AGTTATTAAAAGTCTCT--GAATTAAATGT--G---AGGATTAGTCAT-ACAGCCATCCTGTCAACATCGGAAAGC-GTGTAAACCGTTCTAGCGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCCGC------ATCTTGGGCTCTTAG--GAGCCGCTAGGAGGGCGGCCACAAGCAGG-----AGG--TGAAGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854063 207 - 880730 G----TGCAATTTTCT---CCTTTTTGAAAT--AGTTCTTAAAAATCTCT--GAATTAAATGT--G---AGGATTAGTCAT-ACAGCCATCCTGTCAACATCGGAAAGC-GTGTAAACCGTTCTAGCGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCCGC------ATCTTGGGCTCTTAG--GAGCTGCCGGGAGGGCGTCCACAAGCAGG-----AGG--TGAAGCCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192676 207 + 180051392 G----TGCCGTTTTCT---CCTTTTTGAAAT--AGTTATTAAAAACCTCGTTGAATTAAATGT--G---AAGATTAGTCAT-ACAGCCATCCTGTC-ACATCAGAAAGC-ATGTAAA-CGTTCTAGTGTGTTGCTGTGATTGGTGCTGACTGAGCAGAGA-TCCCTGCCGC------ATCTTGGGCTTTTAA--GAGCTGCTAGGAGGGCGTTGACAAGCCAG-----AAG--TAAAGCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257267 207 - 181584905 G----TGCAGTTTTCT---CCTTTTTGAAAT--AGTTATTAAAAACGTCGTTGAATTAAATGT--G---AAGATTAGTCAT-ACAGCCATCCTGTC-ACATCAGAAAGC-ATGTAAA-CGTTCTAGTGTGTTGCTGTGATTGGTGCTGACTGAGCAGAGA-TCCCTGCCGC------ATCTTGGGCTTTTAA--GAGCTGCTAGGAGGGCGTTGACAAGCCAG-----AAG--TAAAGCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17642 207 - 100774 G----TGCAGTTTTCT---CCTTTTTGAAAT--AGTTATTAAAAACCTCATTGAATTAAATGT--G---AAGATTAGTCAT-ACAGCCATCCTGTC-ACATCAGAAAGC-ATGTAAA-CGTTCTAGTGCGTTGCTGTGATTGGTGCTGACTGAGCAGAGA-TCCCTGCCGC------ATCTTGGGCTTTTAA--GAGCTGCTTGGAGGGCGTTGACAAGCCAG-----AAG--TAAAGCCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175777 210 + 218577 G----TGCAATTTCCTCTCCTTTTTTGAAAT--AGTTATTAAAAACCTCGTTGAATTAAATGT--G---AAGATTAGTCAT-ACAGCCATCCTGTC-ACATCAGAAAGC-ATGTAAA-CGTTCTAGTGTGTTGCTGTGATTGGTGCTGACTGAGCAGAGA-TCCCTGCCGC------ATCTTGGGCTTTTAA--GAGCTGCTAGGAGGGCGTTGACAAGCCAG-----AAG--TAAAGCCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89589934 207 - 91010382 G----TGCAGTTTTCT---CCTTTTTGAAAT--AGTTATTAAAAACCTCGTTGAATTAAATGT--G---AAGATTAGTCAT-ACAGCCATCCTGTC-GCATCAGAAAGC-AGGTAAA-CGTTCTAGTGTGTTGCTGTGGCTGGTGCTGACTGAGCAGAGA-TCCCTGCCGC------TTCTTGGGCTTTTAA--GAGCTGCTTGGAGGGCGTCCACAGGCAGG-----AAG--TAAAGCCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23707 207 + 930449 G----TGCAATTTTCT---CCTTTTTGAAAT--AGTTATTAAAAACCTCGTTGAATTAAACGT--G---AAGATTAGTCAT-ACAGCCATCCTGTC-ACATCAGAAAGC-ATGTAAA-CGTTCTAGTGTGTTGCTGTGGCTGGTGCTGACTGAGCAGAGA-TCCCTGCCGC------ATCTTGGGCTTTTAA--GAGCTGCTTGGAGGACGTCCACAGGCAGG-----AAG--TAAAGCCC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865318 210 + 1687011 G----TGCAATTTTCT---CCTTTCTGAAAT--AGTTATTAAAAACCTCCTTGAATTAAATGT--G---AAGATTAGTCAT-ACTGCCGTCCTGTCAACATCAGAAAGC-ATGTAAA-CGTTCTAGTGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCTGCCGC------ATCTTGGGCTTTTAA--GAGCTGCTTGGAGGCCGTCCACAGGCAGG-----AAGTATAAAGCCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 138814 181 - 204313951 G----TGCGATTTTCT--------------------------------GGTTGAATTAAATGT--G---AGGATTAGTCAT-GCACCCATCCCGTCTACATCATGTAA--ATCTAAA-CGTTTTAGTGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGACCCCCCGCCGC------ATCTTGGGCGCTTAA--GAGCTGCCAGGAGGGCGTCCACAAGCAAG-----AAG--TAAAGTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100688 175 - 16417988 G----TGCAATTTTCT--------------------------------GGTTGAATTTAATGT--G---AGAATTAGTCTT-GCAGCTATCCCGTCTGCATCATGTAA--ATGTAAA-CGTTTTAGTCTGTTGCTGTGGTTGGTG----CTGAGCAGAGA-CCCCCGCCGC------AACTTGGGCGCTTAA--GAGCTGCCAGGA-GGCATCCACAAGCGGA-----AAG--TCAAGTCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200260 179 + 306014 G----TGCAATTTTCT--------------------------------GGTTGAATTAAATGT--G---AGAATTGGTCAT-GCAGCCACCCCGTCTGCATCATGCAA--ATGTAAA-CGTTTTAGTGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCTGC------AAGTTGGGCGCTTAA--GAGCTGCCAGGA-GGCGTCCACAAGCAGG-----AAG--TAAAGTCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 64981 178 + 211231 G----TGCGATTTTCT--------------------------------GGTTGAATTAAATAT--G---AGGATTAGTCGT-GC-GCCGTCCCGTCTGCATCATGTAA--ATGTGAA-CG-TTCGGTGTGTGGCTGTGGTTGCTGCTGACTGAGCAGAGC-CCCCCGCCGC------ATCTTGGGCGCTGAA--GAGCTGCCAGGAGCGCGTCCGGAAGCAGC-----ACG--TGAAGCCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 29055 189 + 2165740 GTGACTGCAGTTTTCT---CCTTTCTGAAATACAGATGTTAACAA---TTTTGAGTTAAATGT--G---AGTCTTAGTCGTAACAGGCATCCCATCAATACCAGAAAG----------C-------------------ATTGGCGTTGACTGAGCAGTCA-ACCACCCCACC-CCTAGTCTGACAGTCCTAA--GTGCTGCTAGGAGGGAGTCCACTAGCAGG-----AA---TTAAGTCC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46072141 197 - 120421639 ATGGCTGCAGTTGTCT---ATTTTCTGAAAT--AGATATTAAAATGCATGTTCAATGAAATGTTCA---AGGGTTAGTTG--GCAGCTATTCTTGCAAGGCCAGAAGGC-ATTTTCA-AACCTTGATA-ATTTCTGTGATTTGTATTTGCTGC-CACAAA-CTCCTACTTCC-----ACCTCTATCCCTTGG--GCTCTGCAAGAAGGGTT----------------------TTAAGTCC i mm10.chr13 C 0 C 0 s canFam3.chr34 30160218 184 - 42124431 G----TGCAGTTCTGT---CCGTCCTGAAAT--AGAGGT---------CTTACCAGTTCACGT--G---AGGAGGG------TCAGCCATCCCGCCAGCGCCGGAGGACAGTTTACA-GGCTTTCACGAGTTGCTGTGGCTGGAG-----GGTGCAGAGT-CCGCGGTCGG---------TGGGGTCATCGC--GGTCAGCT--------GTCCCTAAGCAGACTTGCAGG--TGCTCCTA i canFam3.chr34 I 431 C 0 s dasNov3.JH577625 529318 207 + 913073 ----------ATGCCT---CTTTTTTGAAATTTGGGTATTAAAGCACATG-----TTAAATGT--GAGAAGGATGACTGAG-GTAGCCATCCAGTCAACAGCAGGAAGTGCTTTAAA-TGCTCGGATGAGATGCTGTGGTTGGTACCCCCTGTGCAAAGA-CCATCCTCTCTCCCCAAGCCTGAGTTGTGAGATGAGCTCCTAGGA----GTCCATGAGCACT-----AAG--CTAAGTTC i dasNov3.JH577625 C 0 I 1060 e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=97804.000000 s hg38.chr3_KI270779v1_alt 29930 10 + 205312 ATGGTCAGTG s panPan2.chrUn_NW_014024201v1 4512 10 + 190779 ATGGTCAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854270 10 - 880730 ATGGTCAGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192883 10 + 180051392 ATGGTCAGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257474 10 - 181584905 ATGGTCAGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17849 10 - 100774 ATGGTCAGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175987 10 + 218577 ATGGTCAGTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590141 10 - 91010382 ATGGTCATTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23914 10 + 930449 ATGGTCAGTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865528 10 + 1687011 ATGGTCAGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 138995 10 - 204313951 GTGGTCAGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100863 10 - 16417988 ATGGTCAGTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200439 10 + 306014 ATGGTCGGTG i cebCap1.NW_016108150v1 C 0 I 34 s aotNan1.NW_018494784v1 65159 10 + 211231 GTGGTCAGTG i aotNan1.NW_018494784v1 C 0 I 41 s otoGar3.GL873745 29244 10 + 2165740 TTGGTCAGTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46072338 9 - 120421639 -TGATCATTG i mm10.chr13 C 0 C 0 s canFam3.chr34 30160402 10 - 42124431 CCTGTCAGCT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 529525 1060 + 913073 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=70033.000000 s hg38.chr3_KI270779v1_alt 29940 22 + 205312 GGACTTTTTAGGGGCAA---------TGGTA s panPan2.chrUn_NW_014024201v1 4522 22 + 190779 GGACTTTTTAGGGGCAA---------TGGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854280 22 - 880730 GGACTTTTTAGGGGCAA---------TGGTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192893 22 + 180051392 GGGCTTTTTAGGGGAAA---------TGTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257484 22 - 181584905 GGGCTTTTTAGGGGAAA---------TGTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17859 22 - 100774 GGACTTTTTAGGGGAAA---------TGTTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 175997 22 + 218577 GGGCTTTTTAGGGGAAA---------TGTTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590151 22 - 91010382 GGGCATTTTAGGGGAAA---------CGTTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23924 22 + 930449 GGACTTTTTAGGGGAAA---------CGTTA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865538 22 + 1687011 GGGCTTTTTAGGGGAAA---------CGTTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139005 6 - 204313951 ----------------A---------CGGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100873 6 - 16417988 ----------------A---------TGGCC i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 29254 31 + 2165740 GGGCTTTTTTAGGGGAATTGCTAGACTGGTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46072347 22 - 120421639 AAGCCCTTTACAGGAGA---------TAATA i mm10.chr13 C 0 I 1179 s canFam3.chr34 30160412 12 - 42124431 ---------GAAGAGAC---------TGAC- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 529525 1060 + 913073 I e aotNan1.NW_018494784v1 65169 41 + 211231 I e cebCap1.NW_016108150v1 200449 34 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=134292.000000 s hg38.chr3_KI270779v1_alt 29962 30 + 205312 GCTTGTGGTTGGAGAGAAGCTAGATAGAGC s panPan2.chrUn_NW_014024201v1 4544 30 + 190779 GCTTGTGGTTGGAGAGAAGCTAGTTAGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854302 30 - 880730 GCTTGTGGTTGGAGAGAAGCTAGATAGAGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192915 26 + 180051392 GCTTGTGATTGGAGAAAAGC----TAGGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257506 26 - 181584905 GCTTGTGATTGGAGAAAAGC----TAGGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17881 26 - 100774 GCTTGTGATTGGAGAAAAGC----TAGGGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176019 26 + 218577 GCTTGTGATTGGAGAAAAGC----TAGGGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590173 26 - 91010382 GCTTGTGATTGGAGAAAAGC----TAGGGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23946 26 + 930449 GCTTGTGATGGGAGAAAAGC----TAGGGC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865560 26 + 1687011 GCTTGTGATTGGAGAAAAGC----AAGGGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139011 26 - 204313951 GCTTGCTATTAGAGAAGAGC----TAGGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100879 26 - 16417988 GCTTGCGACTGGAGAAGAGC----TGGGGC i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 29285 21 + 2165740 ACTTCTGATTGGAAAAGAGC----T----- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30160424 28 - 42124431 GGGTGTGTTTGGGGACAAGCGGGATAGG-- i canFam3.chr34 C 0 C 0 e mm10.chr13 46072369 1179 - 120421639 I e dasNov3.JH577625 529525 1060 + 913073 I e aotNan1.NW_018494784v1 65169 41 + 211231 I e cebCap1.NW_016108150v1 200449 34 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=2760.000000 s hg38.chr3_KI270779v1_alt 29992 1 + 205312 C s panPan2.chrUn_NW_014024201v1 4574 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854332 1 - 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192941 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257532 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17907 1 - 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176045 1 + 218577 T i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590199 1 - 91010382 T i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23972 1 + 930449 T i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865586 1 + 1687011 T i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139037 1 - 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100905 1 - 16417988 T i saiBol1.JH378155 C 0 I 3 s mm10.chr13 46073548 1 - 120421639 C i mm10.chr13 I 1179 C 0 e otoGar3.GL873745 29306 0 + 2165740 C e dasNov3.JH577625 529525 1060 + 913073 I e canFam3.chr34 30160452 0 - 42124431 C e aotNan1.NW_018494784v1 65169 41 + 211231 I e cebCap1.NW_016108150v1 200449 34 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=25941.000000 s hg38.chr3_KI270779v1_alt 29993 4 + 205312 AGTG s panPan2.chrUn_NW_014024201v1 4575 4 + 190779 AGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854333 4 - 880730 AGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192942 4 + 180051392 GGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257533 4 - 181584905 GGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17908 4 - 100774 GGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176046 4 + 218577 GGTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590200 4 - 91010382 GGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23973 4 + 930449 GGTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865587 4 + 1687011 GGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139038 4 - 204313951 AGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100909 4 - 16417988 AGTA i saiBol1.JH378155 I 3 C 0 s cebCap1.NW_016108150v1 200483 4 + 306014 AGTA i cebCap1.NW_016108150v1 I 34 C 0 s otoGar3.GL873745 29306 4 + 2165740 AGCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46073549 4 - 120421639 AGTG i mm10.chr13 C 0 C 0 e dasNov3.JH577625 529525 1060 + 913073 I e canFam3.chr34 30160452 0 - 42124431 C e aotNan1.NW_018494784v1 65169 41 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=387203.000000 s hg38.chr3_KI270779v1_alt 29997 45 + 205312 CCTTTGTCCCCAA------CCCAGA-TGGTGCCCAGTGTTCCTTC-TGCAGAC s panPan2.chrUn_NW_014024201v1 4579 45 + 190779 CCTTTGTCCCCAA------CCCAGA-TGGTGCCCAGTGTTCCTTC-TGCAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854337 45 - 880730 CCTTTGTCCCCAA------CCCAGA-TGGTGCCCAGTGTTCCTTC-TGCAGAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192946 45 + 180051392 CCTTTGTCCTTAA------CCCAGA-TGGTGCCCAGTGTTCCTCC-TGCAGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257537 45 - 181584905 CCTTTGTCCTTAA------CCCAGA-TGGTGCCCAGTGTTCCTCC-TGCAGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17912 45 - 100774 CCTTTGTCCTTAA------CCCAGA-TGGTGCCCAGTGTTCCTCC-TGCAGCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176050 45 + 218577 CCTTTGTCCTTAA------CCCAGA-TGGTGCCCAGTGTTCCTCC-TGCAGCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590204 45 - 91010382 CCTTTGCTGTCAA------CCCAGA-TGGTGCCCAGTGTTCCTTC-TGCAGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 23977 45 + 930449 CCTTTGCCCTCAA------CCCAGA-TAGTGCCCAGTGTTCCTTC-TGCAGCC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865591 45 + 1687011 CCTTTGTCCTCAA------CCCAGA-TGGTGCCCAGTGTTCCTTC-TGCAGCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139042 45 - 204313951 CCTTTGTCCTCAT------CCCGGA-TGGTGCCCGGTGCTCCTTC-TGCAGAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100913 45 - 16417988 CCTTTGTCCTCAT------CCCAGG-TGGTGCCCCGTGCTCCTTC-TGCAGAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200487 45 + 306014 CCTTTGTCCTCAT------CCCAGG-TGGTGCCCCGTGCTGCTTC-TGCAGAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 65210 45 + 211231 CCTTTGTCCTCAT------CCCAGA-TGGTGCCCGGTGCTCCTTC-TGCAGAC i aotNan1.NW_018494784v1 I 41 I 97 s otoGar3.GL873745 29310 46 + 2165740 TGTTTGTTCTCAG------TCCGGA-TTGTGTCCAGTGTTCCTTTGTGTAGAC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46073553 40 - 120421639 ------TCCTCGT------CCTAGGCTGGTGCTCAGTGATTCCTC-TGGAGAC i mm10.chr13 C 0 C 0 s canFam3.chr34 30160452 47 - 42124431 --TCTGTCCACAGTCATCCCCCGCC-TGGTGCTT--CCGTCCTCG-TGCAGAC i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 529525 1060 + 913073 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=53612.000000 s hg38.chr3_KI270779v1_alt 30042 7 + 205312 TAAGGCC s panPan2.chrUn_NW_014024201v1 4624 7 + 190779 TAAGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854382 7 - 880730 TAAGGCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192991 7 + 180051392 TCAGACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257582 7 - 181584905 TCAGACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17957 7 - 100774 TCAGGCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176095 7 + 218577 TCAGACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590249 7 - 91010382 TAAGACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24022 7 + 930449 TAAGACC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865636 7 + 1687011 TCAGACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139087 7 - 204313951 CAAGACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100958 7 - 16417988 CAAGACC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200532 7 + 306014 CAAGACC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 29356 7 + 2165740 TAAGACC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46073593 7 - 120421639 TAAGACC i mm10.chr13 C 0 I 2297 s canFam3.chr34 30160499 7 - 42124431 TGCGACC i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 529525 1060 + 913073 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=11565.000000 s hg38.chr3_KI270779v1_alt 30049 2 + 205312 CC- s panPan2.chrUn_NW_014024201v1 4631 2 + 190779 CC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854389 2 - 880730 CC- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 192998 2 + 180051392 CC- i rheMac8.chr6 C 0 I 11 s macFas5.chr6 180257589 2 - 181584905 CC- i macFas5.chr6 C 0 I 11 s macNem1.NW_012013899v1 17964 2 - 100774 CC- i macNem1.NW_012013899v1 C 0 I 11 s cerAty1.NW_012004452v1 176102 2 + 218577 CT- i cerAty1.NW_012004452v1 C 0 I 11 s chlSab2.chr4 89590256 2 - 91010382 CC- i chlSab2.chr4 C 0 I 11 s manLeu1.NW_012107609v1 24029 2 + 930449 CC- i manLeu1.NW_012107609v1 C 0 I 11 s colAng1.NW_012116910v1 865643 2 + 1687011 CC- i colAng1.NW_012116910v1 C 0 I 11 s calJac3.chr2 139094 2 - 204313951 CC- i calJac3.chr2 C 0 I 11 s saiBol1.JH378155 100965 2 - 16417988 CC- i saiBol1.JH378155 C 0 I 11 s cebCap1.NW_016108150v1 200539 2 + 306014 CC- i cebCap1.NW_016108150v1 C 0 I 91 s otoGar3.GL873745 29363 2 + 2165740 CC- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30160506 3 - 42124431 CTC i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 529525 1060 + 913073 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=8281.000000 s hg38.chr3_KI270779v1_alt 30051 1 + 205312 A s panPan2.chrUn_NW_014024201v1 4633 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854391 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193011 1 + 180051392 A i rheMac8.chr6 I 11 C 0 s macFas5.chr6 180257602 1 - 181584905 A i macFas5.chr6 I 11 C 0 s macNem1.NW_012013899v1 17977 1 - 100774 A i macNem1.NW_012013899v1 I 11 C 0 s cerAty1.NW_012004452v1 176115 1 + 218577 A i cerAty1.NW_012004452v1 I 11 C 0 s chlSab2.chr4 89590269 1 - 91010382 A i chlSab2.chr4 I 11 C 0 s manLeu1.NW_012107609v1 24042 1 + 930449 A i manLeu1.NW_012107609v1 I 11 C 0 s colAng1.NW_012116910v1 865656 1 + 1687011 A i colAng1.NW_012116910v1 I 11 C 0 s calJac3.chr2 139107 1 - 204313951 A i calJac3.chr2 I 11 C 0 s saiBol1.JH378155 100978 1 - 16417988 A i saiBol1.JH378155 I 11 C 0 s otoGar3.GL873745 29365 1 + 2165740 A i otoGar3.GL873745 C 0 I 256 s canFam3.chr34 30160509 1 - 42124431 A i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 529525 1060 + 913073 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=19260.000000 s hg38.chr3_KI270779v1_alt 30052 3 + 205312 GGC s panPan2.chrUn_NW_014024201v1 4634 3 + 190779 GGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854392 3 - 880730 GGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193012 3 + 180051392 GGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257603 3 - 181584905 GGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17978 3 - 100774 GGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176116 3 + 218577 GGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590270 3 - 91010382 GGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24043 3 + 930449 GGC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865657 3 + 1687011 GGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139108 3 - 204313951 GGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100979 3 - 16417988 TGC i saiBol1.JH378155 C 0 C 0 s canFam3.chr34 30160510 3 - 42124431 GGC i canFam3.chr34 C 0 I 245 e otoGar3.GL873745 29366 256 + 2165740 I e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 529525 1060 + 913073 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=26752.000000 s hg38.chr3_KI270779v1_alt 30055 5 + 205312 ACCTC s panPan2.chrUn_NW_014024201v1 4637 5 + 190779 ACCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854395 5 - 880730 ACCTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193015 5 + 180051392 ACCTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257606 5 - 181584905 ACCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17981 5 - 100774 ACCTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176119 5 + 218577 ACCTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590273 5 - 91010382 ACCTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24046 5 + 930449 ACCTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865660 5 + 1687011 ACCTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139111 5 - 204313951 GCTTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100982 5 - 16417988 GCTTC i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 29366 256 + 2165740 I e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 529525 1060 + 913073 I e canFam3.chr34 30160513 245 - 42124431 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=29199.000000 s hg38.chr3_KI270779v1_alt 30060 5 + 205312 AGACC s panPan2.chrUn_NW_014024201v1 4642 5 + 190779 AGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854400 5 - 880730 AGACC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193020 5 + 180051392 AGACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257611 5 - 181584905 AGACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17986 5 - 100774 AGACA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176124 5 + 218577 AGACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590278 5 - 91010382 AGACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24051 5 + 930449 AGACA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865665 5 + 1687011 AGACA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139116 5 - 204313951 AGACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100987 5 - 16417988 AGACA i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 29622 5 + 2165740 AAACA i otoGar3.GL873745 I 256 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 529525 1060 + 913073 I e canFam3.chr34 30160513 245 - 42124431 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=68554.000000 s hg38.chr3_KI270779v1_alt 30065 10 + 205312 AGATGGC------AAG s panPan2.chrUn_NW_014024201v1 4647 10 + 190779 AGATGGC------AAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854405 10 - 880730 AGATGGC------AAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193025 10 + 180051392 AGATGGC------AAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257616 10 - 181584905 AGATGGC------AAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 17991 10 - 100774 AGATGGG------AAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176129 10 + 218577 AGATGGC------AAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590283 10 - 91010382 AGATGGC------AAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24056 10 + 930449 AGATGGC------AAG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865670 10 + 1687011 AGATGGC------AAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139121 10 - 204313951 AAATGGC------AAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 100992 10 - 16417988 AAACGGC------AAG i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 29627 16 + 2165740 AGATGGTGAGATAGAG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 530585 10 + 913073 AGATGGC------AAG i dasNov3.JH577625 I 1060 C 0 e mm10.chr13 46073600 2297 - 120421639 I e canFam3.chr34 30160513 245 - 42124431 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=198452.000000 s hg38.chr3_KI270779v1_alt 30075 40 + 205312 ------ATAGCAAAATGGAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA s panPan2.chrUn_NW_014024201v1 4657 39 + 190779 ------ATAGCAAAATGGAACC--A----------------AAATTTAGTCTTGGGTTT-GTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854415 40 - 880730 ------ATAGCAAAATGGAACC--A----------------AAATTTAGTCTTGGGTTTTGTTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193035 40 + 180051392 ------ATAGCGAAATTTAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257626 40 - 181584905 ------ATAGCGAAATTTAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 18001 40 - 100774 ------ATAGCGAAATTTAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176139 40 + 218577 ------ATAGCGAAATTTAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590293 40 - 91010382 ------ATAGCAAAATTGAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24066 40 + 930449 ------ATAGCAAAGTTGAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865680 40 + 1687011 ------ATAGCAAAATTGAACC--A----------------AAATTTAGTCTTGGGTTTTGTAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139131 53 - 204313951 ------ATAGCAAAATTAAACCAAA--AGTTAGGCCTACC-AAATATGGTCTTGTGTTTTTT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 101002 51 - 16417988 ------ATAGCAAAATTAAACC--A--AGTTAGGCCTACC-AAATATGGTCTTGGGTTTTTT-- i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 29643 56 + 2165740 ------ATAGCAAAGTAGAACT--ATAAGTTAAGGCTACCAAGATCTGGTCTTTAGTTTTTTTA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30160758 52 - 42124431 ------ATAGCAAAATTGAGCC--GCCACTTAGGCCTCCT-AGAAGATGCCTTTGGTCTTA--- i canFam3.chr34 I 245 C 0 s dasNov3.JH577625 530595 58 + 913073 ACAGAAGTGGCAAAACTGAACT--GTAAGTTAGGCCTCCCTAAAGATGGTCTTGGGTTTA---- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 65255 97 + 211231 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=20298.000000 s hg38.chr3_KI270779v1_alt 30115 5 + 205312 --AAGTC s panPan2.chrUn_NW_014024201v1 4696 5 + 190779 --AAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854455 5 - 880730 --AAGTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193075 5 + 180051392 --AAGTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257666 5 - 181584905 --AAGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 18041 5 - 100774 --AAGTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176179 5 + 218577 --AAGTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590333 5 - 91010382 --AAGTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24106 5 + 930449 --AAGTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865720 5 + 1687011 --AAGTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139184 5 - 204313951 --AAGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 101053 5 - 16417988 --AAGTA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 65352 5 + 211231 --AAGTG i aotNan1.NW_018494784v1 I 97 C 0 s otoGar3.GL873745 29699 3 + 2165740 ---GGT- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30160810 5 - 42124431 --AAGTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 530653 5 + 913073 AAGAG-- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e cebCap1.NW_016108150v1 200541 91 + 306014 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=202559.000000 s hg38.chr3_KI270779v1_alt 30120 26 + 205312 TTTTTATCTTGATGAAGGTAGCTTTT s panPan2.chrUn_NW_014024201v1 4701 24 + 190779 TTTT-ATCTTGATGAAGGTAGCTTT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854460 26 - 880730 TTTTTATCTTGATGAAGGTAGCTTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193080 24 + 180051392 TTTTTATCT--ATGAACTTAGCTTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257671 24 - 181584905 TTTTTATCT--ATGAACTTAGCTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 18046 24 - 100774 TTTTTATCT--ATGAACTTAGCTTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176184 24 + 218577 TTTTTATCT--ATGAAGTTAGCTTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590338 23 - 91010382 TTTTTATCT---TGAAGTTAGCGTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24111 24 + 930449 TTTTTATCT--ATGAAGTTAGCTTTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865725 23 + 1687011 TTTTTATCT---TGAAGTTAGCGTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139189 26 - 204313951 TTTTTATATTGATGAAGTCAGCTTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 101058 26 - 16417988 TTTTTATCTTGATGAAGTCAGCTTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 200632 26 + 306014 TTTTTATCTTGATGAAGTCAGCTTTT i cebCap1.NW_016108150v1 I 91 C 0 s aotNan1.NW_018494784v1 65357 26 + 211231 TTTTTATCTTGATGAAGTCAGCTTTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 29702 26 + 2165740 CTTTTATCTTGATGAAGCTAGTTTCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30160815 26 - 42124431 TTTATATCTTGATGAAGATAGCTTTT i canFam3.chr34 C 0 I 1098 s dasNov3.JH577625 530658 26 + 913073 TGTTTATCTTGATGAAGATAGCTTTT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=90521.000000 s hg38.chr3_KI270779v1_alt 30146 9 + 205312 CCTACAGAA s panPan2.chrUn_NW_014024201v1 4725 9 + 190779 CCTACAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854486 9 - 880730 CCTACAGAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193104 9 + 180051392 CCTACAGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180257695 9 - 181584905 CCTACAGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 18070 9 - 100774 CCTACAGAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 176208 9 + 218577 CCTACAGAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89590361 9 - 91010382 CCTACAGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 24135 9 + 930449 CCTACAGAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 865748 9 + 1687011 CCTACAGAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 139215 9 - 204313951 CCTACAGAA i calJac3.chr2 C 0 I 1138 s saiBol1.JH378155 101084 9 - 16417988 CCTACAGAA i saiBol1.JH378155 C 0 I 1076 s cebCap1.NW_016108150v1 200658 9 + 306014 CCTGCAGAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 65383 9 + 211231 CCTACAGAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 29728 9 + 2165740 CCTACAGAA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 530684 9 + 913073 CTTTGGGAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e canFam3.chr34 30160841 1098 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=10920.000000 s hg38.chr3_KI270779v1_alt 30155 1 + 205312 A s panPan2.chrUn_NW_014024201v1 4734 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854495 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 193113 1 + 180051392 A i rheMac8.chr6 C 0 I 1164 s macFas5.chr6 180257704 1 - 181584905 A i macFas5.chr6 C 0 I 1148 s macNem1.NW_012013899v1 18079 1 - 100774 A i macNem1.NW_012013899v1 C 0 I 1352 s cerAty1.NW_012004452v1 176217 1 + 218577 A i cerAty1.NW_012004452v1 C 0 I 1352 s chlSab2.chr4 89590370 1 - 91010382 A i chlSab2.chr4 C 0 I 1148 s manLeu1.NW_012107609v1 24144 1 + 930449 A i manLeu1.NW_012107609v1 C 0 I 1148 s colAng1.NW_012116910v1 865757 1 + 1687011 A i colAng1.NW_012116910v1 C 0 I 1415 s calJac3.chr2 140362 1 - 204313951 A i calJac3.chr2 I 1138 C 0 s cebCap1.NW_016108150v1 200667 1 + 306014 A i cebCap1.NW_016108150v1 C 0 I 1574 s aotNan1.NW_018494784v1 65392 1 + 211231 A i aotNan1.NW_018494784v1 C 0 I 1117 s otoGar3.GL873745 29737 1 + 2165740 A i otoGar3.GL873745 C 0 I 1070 s canFam3.chr34 30161939 1 - 42124431 A i canFam3.chr34 I 1098 C 0 s dasNov3.JH577625 530693 1 + 913073 A i dasNov3.JH577625 C 0 I 1338 e mm10.chr13 46073600 2297 - 120421639 I e saiBol1.JH378155 101093 1076 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=22911.000000 s hg38.chr3_KI270779v1_alt 30156 6 + 205312 GTCGTG s panPan2.chrUn_NW_014024201v1 4735 6 + 190779 GTCGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854496 6 - 880730 GTCGTG i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180258853 6 - 181584905 GTCATG i macFas5.chr6 I 1148 C 0 s macNem1.NW_012013899v1 19432 6 - 100774 GTCATG i macNem1.NW_012013899v1 I 1352 C 0 s chlSab2.chr4 89591519 6 - 91010382 GTCATG i chlSab2.chr4 I 1148 C 0 s manLeu1.NW_012107609v1 25293 6 + 930449 GTCATG i manLeu1.NW_012107609v1 I 1148 C 0 s colAng1.NW_012116910v1 867173 6 + 1687011 GTCATG i colAng1.NW_012116910v1 I 1415 C 0 s calJac3.chr2 140363 6 - 204313951 GTCGTG i calJac3.chr2 C 0 I 4 s canFam3.chr34 30161940 6 - 42124431 GTCATG i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 29738 1070 + 2165740 I e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 530694 1338 + 913073 I e aotNan1.NW_018494784v1 65393 1117 + 211231 I e cebCap1.NW_016108150v1 200668 1574 + 306014 I e saiBol1.JH378155 101093 1076 - 16417988 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e rheMac8.chr6 193114 1164 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=7513.000000 s hg38.chr3_KI270779v1_alt 30162 2 + 205312 CG s panPan2.chrUn_NW_014024201v1 4741 2 + 190779 CG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854502 2 - 880730 CG i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180258859 2 - 181584905 CG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19438 2 - 100774 CG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591525 2 - 91010382 CG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25299 2 + 930449 CG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867179 2 + 1687011 CG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140373 2 - 204313951 TA i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 102169 2 - 16417988 CA i saiBol1.JH378155 I 1076 C 0 s otoGar3.GL873745 30808 2 + 2165740 CA i otoGar3.GL873745 I 1070 C 0 s canFam3.chr34 30161946 2 - 42124431 CA i canFam3.chr34 C 0 I 4 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 530694 1338 + 913073 I e aotNan1.NW_018494784v1 65393 1117 + 211231 I e cebCap1.NW_016108150v1 200668 1574 + 306014 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e rheMac8.chr6 193114 1164 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=499.000000 s hg38.chr3_KI270779v1_alt 30164 2 + 205312 -TT s panPan2.chrUn_NW_014024201v1 4743 2 + 190779 -TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854504 2 - 880730 -TT i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180258861 2 - 181584905 -TG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19440 2 - 100774 -TG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591527 2 - 91010382 -TG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25301 2 + 930449 -TG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867181 2 + 1687011 -TG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140375 2 - 204313951 -TT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 102171 2 - 16417988 -TT i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 66510 2 + 211231 -TT i aotNan1.NW_018494784v1 I 1117 C 0 s otoGar3.GL873745 30810 2 + 2165740 -TT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30161952 2 - 42124431 CT- i canFam3.chr34 I 4 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 530694 1338 + 913073 I e cebCap1.NW_016108150v1 200668 1574 + 306014 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e rheMac8.chr6 193114 1164 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=44172.000000 s hg38.chr3_KI270779v1_alt 30166 6 + 205312 TTTGGG s panPan2.chrUn_NW_014024201v1 4745 6 + 190779 TTTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854506 6 - 880730 TTTGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194278 6 + 180051392 TTTAGG i rheMac8.chr6 I 1164 C 0 s macFas5.chr6 180258863 6 - 181584905 TTTAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19442 6 - 100774 TTTAGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591529 6 - 91010382 TTTAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25303 6 + 930449 TTTAGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867183 6 + 1687011 TTTAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140377 6 - 204313951 TTTAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 102173 6 - 16417988 TTTAGA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 66512 6 + 211231 TTTAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 30812 6 + 2165740 TTTAGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30161954 6 - 42124431 TTTAGA i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 530694 1338 + 913073 I e cebCap1.NW_016108150v1 200668 1574 + 306014 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=225210.000000 s hg38.chr3_KI270779v1_alt 30172 32 + 205312 TTCTTCGTTGGCTGCTTTTGTGAT----TGTGTAGG s panPan2.chrUn_NW_014024201v1 4751 32 + 190779 TTCTTCGTTGGCTGCTTTTGTGAT----TGTGTAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854512 32 - 880730 TTCTTCGTTGGCTGCTTTTGTGAT----TGTGTAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194284 32 + 180051392 TTCTTCGCTGGCTGCTTTTGTGAT----TGTATGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180258869 32 - 181584905 TTCTTCGCTGGCTGCTTTTGTGAT----TGTGTGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19448 32 - 100774 TTCTTCGCTGGCTGCTTTTGTGAT----TGTGTGGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591535 32 - 91010382 TTCTTCGCTGACTGCTTTTGTGAT----TGTATGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25309 32 + 930449 TTGTTCGCTGGCTGCTTTTGTGAT----TGTGTGGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867189 32 + 1687011 TTCTTCACTGGCTGCTTCTATGAT----TGTATGGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140383 32 - 204313951 CTCTTCGTTGGCTGCTCTTGTAAT----TGTGCAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 102179 32 - 16417988 TTCTTCATTGGCTGCTTTTGTAAT----CGTATAGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 202242 32 + 306014 TTCTTCATTGGCTGCTTTTGTAAT----CGTATAGA i cebCap1.NW_016108150v1 I 1574 C 0 s aotNan1.NW_018494784v1 66518 32 + 211231 TTCTTGATTGGCTGCTTTTGTAAC----TGTATAGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 30818 36 + 2165740 TCCTTTATCAGCTGCTTTTGTAATTACCTATGTAGA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30161960 29 - 42124431 TCCTTTATTGGCTGCTTTTCTGAT----TGTGT--- i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 530694 1338 + 913073 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=652385.000000 s hg38.chr3_KI270779v1_alt 30204 96 + 205312 CTGTACATGCAGATTCGTTTCTTGCTCATGATTTA---------------------TAGGTGCATTTTATTCGATGAGGACCCCTTACTTTGCTAGATTTCGGATATGAATGTCTCT s panPan2.chrUn_NW_014024201v1 4783 96 + 190779 TTGTACATGCAGATTCGTTTCTTGCTCATGATTTA---------------------TAGGTGCATTTTATTCGATGAGGACCCCTTACTTTGCTAGATTTCGGATATGAATGTCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854544 96 - 880730 TTGTACCTGCAGATTAGTTTCTTGCTCATGATTTA---------------------TAGGTGCATTTTATTCGATGAGGACCCCTGACTTTGCTAGATTTCGGATATGAATGTCTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194316 95 + 180051392 TTGTACATGCAGATTAGTTTCTTTCTCATGATTTA---------------------TAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGCTAGATTTCGGA-ATTAATGTCTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180258901 95 - 181584905 TTGTACATGCAGATTAGTTTCTTGCTCATGATTTA---------------------TAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGCTAGATTTCGGA-ATTAATGTCTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19480 95 - 100774 TTGTACATGCAGATTAGTTTTTTGCTCATGATTTA---------------------TAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGCTAGATTTCGGA-ATTAATGTCTCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591567 95 - 91010382 TTGTACGTGCAGATTAGTTTCTTGCTCATGATTTA---------------------TAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGGTAGATTTCGGG-ATTAATGTCTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25341 95 + 930449 TTGTACATGCAGATTAGTTTCTTGCTCATGATTTA---------------------TAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGGTAGATTTCGGG-ATTAATGTCTCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867221 95 + 1687011 TTGCACATGCAGATTAGTTTCTTGCTCATGATTTA---------------------TAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGGTAGATTGCGGG-ATTAATGTCTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140415 114 - 204313951 TTGTACCTGCAGTTTAATTTCTTACCCAT--TTTATTAGATGAGATTTTATTTTATTAGATGTATTTTACTAGATGAGAA-CTCTTATTTTGCTAGATTTTGGATGTTAGTGTCTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 102211 95 - 16417988 TTGTACATGCAGTTTAGTTTCTTGCCCATGGTTTA---------------------TAGGTGCATCTTATTAGATGAGAA-CTCTTATTTTGCTAGATTTTGAATATTAGTGTCTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 202274 95 + 306014 TTGTACATGCAGTTTAGTTTCTTGCCCATGGTTTA---------------------TAGGTGCATTTTATTAGATGAGAA-CTCTTACTTTGCTAGATTTTGGACATTAGTGTCTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 66550 95 + 211231 TTGTACATGCAGTTTAGTTTCTTGCCCGTGGTTTA---------------------TAGGTGCATTTTATTAGATGAGAA-CTCTTACTTTGCTAGATTTTGGATATTAGTGTCTCT i aotNan1.NW_018494784v1 C 0 I 448 s otoGar3.GL873745 30854 94 + 2165740 TTGTACCCACAAATTAGTTTCTTGTTCATGATTTA---------------------TAGGTGTTTTTTATTAGATGAGGACTCCCCTCTTTGCCAGAATGAGGATATTAATATCT-- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30161989 80 - 42124431 ----------AGATCAATTTCCTTTTCATGATTCA---------------------TAGATACCTGTTACTAGATGAGGACTGTCCTCTTTGCTAGATTCC----ACCCTTCTCT-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532032 90 + 913073 ccgcacccacaaattaatttcttgttcgtGACTTA-------------------------GGCATTTTATTAGACAAGGT-TTCCCATTTTGCTAAA-TGAGGATATTAGCATCTCT i dasNov3.JH577625 I 1338 C 0 e mm10.chr13 46073600 2297 - 120421639 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=38867.000000 s hg38.chr3_KI270779v1_alt 30300 11 + 205312 GCACTTGTTAC s panPan2.chrUn_NW_014024201v1 4879 11 + 190779 GCACTTCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854640 11 - 880730 GCACTACTTAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194411 7 + 180051392 GCACTT----C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180258996 7 - 181584905 GCACTT----C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19575 7 - 100774 GCACTT----C i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591662 11 - 91010382 GCACTTCTTAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25436 11 + 930449 GCACTTCTTAC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867316 11 + 1687011 GCACTTCTTTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140529 11 - 204313951 ATACTTCTTAC i calJac3.chr2 C 0 I 394 s saiBol1.JH378155 102306 11 - 16417988 CCACTTTTTAC i saiBol1.JH378155 C 0 I 938 s cebCap1.NW_016108150v1 202369 11 + 306014 ACACTTCTTAC i cebCap1.NW_016108150v1 C 0 I 1042 s otoGar3.GL873745 30948 11 + 2165740 ACCCTTCTTAC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30162069 6 - 42124431 TCACTT----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532122 11 + 913073 GCCCTTTTTAC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=19993.000000 s hg38.chr3_KI270779v1_alt 30311 5 + 205312 TTTTC s panPan2.chrUn_NW_014024201v1 4890 3 + 190779 TTT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854651 5 - 880730 TTTTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194418 5 + 180051392 TTTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259003 5 - 181584905 TTTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19582 5 - 100774 TTTTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89591673 5 - 91010382 TTTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25447 5 + 930449 TTTTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867327 5 + 1687011 TTTTC i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 30959 5 + 2165740 TTTTG i otoGar3.GL873745 C 0 I 3 s canFam3.chr34 30162075 5 - 42124431 TTTTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532133 5 + 913073 TTTTC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e cebCap1.NW_016108150v1 202380 1042 + 306014 I e calJac3.chr2 140540 394 - 204313951 I e saiBol1.JH378155 102317 938 - 16417988 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=33828.000000 s hg38.chr3_KI270779v1_alt 30316 8 + 205312 CCCCTCCA-- s panPan2.chrUn_NW_014024201v1 4893 8 + 190779 CCCCTCCA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854656 8 - 880730 CCCCTCCA-- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194423 8 + 180051392 CCCCTCCA-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259008 8 - 181584905 CCCCTCCA-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 19587 8 - 100774 CCCCTCCA-- i macNem1.NW_012013899v1 C 0 M 855 s chlSab2.chr4 89591678 8 - 91010382 CCCCTCCA-- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25452 8 + 930449 TCCCTCCA-- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867332 8 + 1687011 CCCCTCCA-- i colAng1.NW_012116910v1 C 0 C 0 s cebCap1.NW_016108150v1 203422 8 + 306014 CCCCTCCA-- i cebCap1.NW_016108150v1 I 1042 C 0 s otoGar3.GL873745 30967 8 + 2165740 CACTTCTA-- i otoGar3.GL873745 I 3 C 0 s canFam3.chr34 30162080 5 - 42124431 TCCCT----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532138 7 + 913073 ---CTCCAAC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e calJac3.chr2 140540 394 - 204313951 I e saiBol1.JH378155 102317 938 - 16417988 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=48339.000000 s hg38.chr3_KI270779v1_alt 30324 14 + 205312 CCTCCTGATTCAGT s panPan2.chrUn_NW_014024201v1 4901 14 + 190779 CCTCCTGATTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854664 14 - 880730 CCTCCTGATTCAGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194431 14 + 180051392 GCTCCTAATTCAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259016 14 - 181584905 GCTCCTAATTCAGT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89591686 14 - 91010382 CCTCCTAATTCAGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25460 14 + 930449 CCTCCTAATTCAGT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867340 14 + 1687011 CCTCCTAATTCAGT i colAng1.NW_012116910v1 C 0 C 0 s cebCap1.NW_016108150v1 203430 14 + 306014 CCTCCTAATTCAGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 30975 12 + 2165740 --CCTTAATTCTGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30162085 12 - 42124431 TTTACTG--TCATT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532145 6 + 913073 --------TTCAGT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e calJac3.chr2 140540 394 - 204313951 I e saiBol1.JH378155 102317 938 - 16417988 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=38373.000000 s hg38.chr3_KI270779v1_alt 30338 10 + 205312 C-ATCT-GAAAT s panPan2.chrUn_NW_014024201v1 4915 12 + 190779 CTATCTTGAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854678 10 - 880730 C-ATCT-GAAAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194445 10 + 180051392 C-GTCT-GAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259030 10 - 181584905 T-GTCT-GAAAT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89591700 10 - 91010382 C-ATCT-GAAAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25474 10 + 930449 C-GTCT-GAAAT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867354 10 + 1687011 C-GTCT-GAAAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140934 10 - 204313951 C-GTCT-GAAAT i calJac3.chr2 I 394 C 0 s cebCap1.NW_016108150v1 203444 10 + 306014 C-ATCT-GAAAT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 30987 10 + 2165740 C-ATTT-GAACT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30162097 10 - 42124431 C-ACCT-GTGCT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532151 10 + 913073 C-ATCT-CTACT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e saiBol1.JH378155 102317 938 - 16417988 I e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=57346.000000 s hg38.chr3_KI270779v1_alt 30348 11 + 205312 TCTGTATTGTT s panPan2.chrUn_NW_014024201v1 4927 11 + 190779 TCTGTATTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854688 11 - 880730 TCTGTATAGTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194455 11 + 180051392 TCCATATTGTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259040 11 - 181584905 TCCATATTGTT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89591710 11 - 91010382 TCTATATTGTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25484 11 + 930449 TCTATATTGTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867364 11 + 1687011 TACATATTGTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 140944 11 - 204313951 TCTATATTGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 103255 11 - 16417988 TCTATATTGTT i saiBol1.JH378155 I 938 C 0 s cebCap1.NW_016108150v1 203454 11 + 306014 TCTGTATTGTT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 30997 11 + 2165740 TGAATATTGTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30162107 11 - 42124431 TTCCTGCCATT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532161 11 + 913073 TTTATGCTATT i dasNov3.JH577625 C 0 I 19 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=313163.000000 s hg38.chr3_KI270779v1_alt 30359 77 + 205312 AAGCAAGGTC---------TAAGTATTCCTTTTAGTTATATG---TTCCCC-ATGTTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT s panPan2.chrUn_NW_014024201v1 4938 77 + 190779 AAGCAAGGTC---------TAAGTATTCCTTT-AGTTATATG---TTCCCCTATTTTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854699 77 - 880730 AAGCAAGGTC---------TAAGTATTCCTTTTAGTTATATG---TTCCCC-ATGTTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194466 71 + 180051392 AAGCAAGGTC---------TAA-TATTCCTTT----TATATA---TTCCCC-AT-TTTTTTCTTAG------------AGGAAATGTTTGATTGTTTCTCCT i rheMac8.chr6 C 0 I 1 s macFas5.chr6 180259051 71 - 181584905 AAGCAAGGTC---------TAA-TATTCCTTT----TATATA---TTCCCC-AT-TTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i macFas5.chr6 C 0 I 1 s chlSab2.chr4 89591721 71 - 91010382 AAACAAAGTC---------TAA-TATTCCTTT----TATATG---TTGCCA-AT-TTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012107609v1 25495 71 + 930449 AAGCAAAGTC---------TAA-TATTCCTTT----TATATG---TTCCCA-AT-TTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i manLeu1.NW_012107609v1 C 0 I 1 s colAng1.NW_012116910v1 867375 71 + 1687011 AAGCAAGGTC---------TAA-TATTCCTTT----TATATG---TTCCCC-AT-TTTTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 140955 74 - 204313951 AAGCAAGGTC---------TAACTTTTCCTTTTAGTTATATG---TTCCCC-AT---TTTTCTTAG------------AGGAAATGTTTAATAGTTTCTCCT i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 103266 74 - 16417988 AAGCAAGGTC---------TAACTTTTCCTTTTAGTTATATG---TTCCCC-AT---TTTTCTTAG------------TGGAAATGTTTGATAGCTTCTCCT i saiBol1.JH378155 C 0 I 2 s cebCap1.NW_016108150v1 203465 74 + 306014 AAGCAAGGTC---------TAACTTTTCCTTTTAGTTATGTG---TTCCTC-AT---TTTTCTTAG------------AGGAAATGTTTGATAGTTTCTCCT i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 31008 89 + 2165740 AAACAAGGTC---------GAAGGATTACTTCTAGTTAGGTGGATTTCCTC-AT---TCTTCTTCATGTTGTCCCATTAGAAAATGTTTGATAGGTTCTTCT i otoGar3.GL873745 C 0 I 3 s canFam3.chr34 30162118 92 - 42124431 AA--AAGGTCTGTTTCCTTTAATTTTACCTCTTAGGTAGAT----TTCCTC-AT-TCTTCTCTATG--TTGTTCTGTTGGAAAATGCTTGAAGCTTTAACTT i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e cerAty1.NW_012004452v1 176218 1352 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=71656.000000 s hg38.chr3_KI270779v1_alt 30436 17 + 205312 -AAAAAA---------TTAATAATTGG s panPan2.chrUn_NW_014024201v1 5015 18 + 190779 -AAAAAAA--------TTAATAATTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854776 18 - 880730 -AAAAAAA--------TTAATAACTGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194538 17 + 180051392 --AAAAAA--------TTAATAATTGG i rheMac8.chr6 I 1 C 0 s macFas5.chr6 180259123 13 - 181584905 --AAAA------------AATAATTGG i macFas5.chr6 I 1 C 0 s cerAty1.NW_012004452v1 177570 17 + 218577 --AAAAAA--------TTAATAATTGG i cerAty1.NW_012004452v1 I 1352 C 0 s chlSab2.chr4 89591793 17 - 91010382 --AAAAAA--------TTAATAATTGG i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012107609v1 25567 17 + 930449 --AAAAAA--------TTAATAATTGG i manLeu1.NW_012107609v1 I 1 C 0 s colAng1.NW_012116910v1 867447 17 + 1687011 --AAAAAA--------TTAATAATTGG i colAng1.NW_012116910v1 I 1 C 0 s calJac3.chr2 141030 17 - 204313951 --AAAAAA--------TTAATAATTGA i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 103342 17 - 16417988 --AAAAAA--------TTAATAATTGA i saiBol1.JH378155 I 2 C 0 s cebCap1.NW_016108150v1 203540 15 + 306014 --AAAAAA----------AATAATTGA i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 31100 26 + 2165740 -AAAAAAATACTAAATTTAACAAGTGA i otoGar3.GL873745 I 3 C 0 s canFam3.chr34 30162210 19 - 42124431 AAAAAATG--------TTAGTAAGTgg i canFam3.chr34 C 0 I 722 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=821162.000000 s hg38.chr3_KI270779v1_alt 30453 162 + 205312 C--ACAAAAGACTAGTTTTGTGTCAAAAGTAGTTTTGAGTTTTATCTAAAGACTGACATTGGCTTGAAGTT-----GGGCTTT-----------------------CCAGATTCAAAAATCTGCCCCA---------GATGAGATTTAGATGCAGAGGGTTAGTGTCCTTTT----CCCCAGGGGGATGGCGTGATGATTTGTTC s panPan2.chrUn_NW_014024201v1 5033 162 + 190779 C--ACAAAAGACTAGTTTTGTGTCAAAAGTAGTTTTGAGTTTTATCTAAAGACTGACATTGGCTTAAAGTT-----GGGCTTT-----------------------CCAGATTCAAAAATCTGCCCCA---------GATGAGATTTAGATGCAGAGGGTTAGTGTCCTTTT----CCCCGGGGGGATGGCGTGATGATTTGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854794 162 - 880730 C--ACAAAAGACTAGTTTTGTGTCAAAAGTAGTTTTGAGTTTTATCTAAAGACTGACATTGGCTTGAAGTT-----GGGCTTT-----------------------CCAGATTCAAAAATCTGCCCCA---------GATGAGATTTAGATGCAGAGGGTTAGTGTCCTTTT----CCCCAGGGGGATGGCGTGATGATTTGTTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194555 161 + 180051392 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT------------------------CACATTCAAAACTCTGCCCCA---------GATTAGATTTAGACACAGAGGGTGAGTGTCCTTGT----CCCCAAGGGGATGGCGTGATAATTTGTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259136 161 - 181584905 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT------------------------CACATTCAAAACTCTGCCCCA---------GATTAGATTTAGACGCAGAGGGTGAGTGTCCTTGT----CCCCAAGGGGATGGCGTGATAATTTGTTC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177587 160 + 218577 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT------------------------CACATTCAAAACTCTGCCCCA---------GATTAGATTTAGACACAGAGGGTGAGTGTCCTTGT----CCCC-AGGGGATGGCGTGATAATTTGTTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89591810 161 - 91010382 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT------------------------CAAATTCAAAACTCTGCCCCA---------GATTAGATTTAGACGTAGAGGGTGAGTGTCCTTGT----CCCCAAAGGGATGGCTTGATAATTTGTTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25584 160 + 930449 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT------------------------CAAATTCAAAACTCTGCCCCA---------GATTAGATTTAGACTCAGAGGATGAGTGTCCTTGT----CCCC-AGGGGATGGCGTGATAATTTGTTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867464 161 + 1687011 C--ACACAAGACTAGTCTTGTGATAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT------------------------CAAATTCAAAACTCTACCCCA---------GATTAGATTTAGACACAGAGGGTGAGTGTCCTTGT----CCCCAGGAGGATGGCGTGATAATTTGTTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141047 163 - 204313951 CCAAAAAAAGATTAGTTTTGTGTCAAAACTAGTTTTCAATTTTATCTAAAGACTGAAATTGGCTTAAAGTT-----GGGCTTT-----------------------CCAAATTCAAAAATCTCCCCCA---------GGTTAGA-TTAGATGCAAAGGGTCAGTGCCTTTTT----CTCCAGGGGGATGGCGTAGTAATTTGTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 103359 164 - 16417988 CAAAAAAAAGACTAATTTTGTGTCAAAACTAGTTTTCAGTTTTCTCTAAAGACTGAAATTGGCTTACAGTT-----GGGCTTT-----------------------CCAAATTCAAAAATCTCCCCCA---------GATTAGATTTAGATGCAAAGGGTTAGTGCCCTTTT----CTCCAAGGGGTTGGCATAGTAATTTCTTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 203555 158 + 306014 -GAAAAAAAGACTAGTTTCGTGTCAAAACTAGTTTTCAGTTTTCTCTAAAGACTGAAATTGGCTTACAGTT-----GGGCTTT-----------------------CCAAATTCAAAAATCTCCCCTA---------GAT-----TTAGATGCAAAGGGTTAGTGCCCTTTT----CTCCAAGGGGATGGCATAGTAATTTCTTA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31126 174 + 2165740 C--ACAAAA--------------------------TGAGTTTTATCTCAAGACAGAAATTGGTC---AGTTCTATAGTGTTTTCAGCTCATTCTGTATTTATAACTCCAAATTCTAAAATCTCCCCCAAAAATGGATAATTAGATTTATACTTAAAGGTTTAGTATCATTGTTTTCCACCGGGGAGATGATGTGATGATTTGTTT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e canFam3.chr34 30162229 722 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=424768.000000 s hg38.chr3_KI270779v1_alt 30615 107 + 205312 AAGATTGTG-TTATAGTAGCTGCCC-CT-TTTAAGGCAGCTG--TGTGTGTGTGTGGTGGGG--AGTGGGCAG-TGTG----TATTCCACATCAACATCCTAGAAAGAACGAATAAAC--A- s panPan2.chrUn_NW_014024201v1 5195 107 + 190779 AAGATTGTG-TTATAGTAGCTGCCC-CT-TTTAAGCCAGCTG--TGTGTGTGTGTGGTGGGA--GGTGGGCAG-TGTG----TATTCCACATCAACATCCTAGAAAGAACGAATAAAC--A- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 854956 108 - 880730 AAGATTGTGTTTATAGTAGCTGCCC-CT-TTTAAGCCCGCTG--TGTGTGTGTGTGGTGGGG--GGTGGGCAG-TGTG----TATTCCACATCAACATCCTAGAAAGAACGAATAAAC--A- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194716 105 + 180051392 ACGGTTGTG-TTATGGGAGCTGCCC-CT-TCTAAGCTGGCTC--TATGTGTGTGTGGC-CGG--GGCAGGCAG-TGGG----CATTCCATGTCAGCATCCTAGAAAGAACAAATAAAC---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259297 105 - 181584905 ACAGTTGTG-TTATGGGAGCTGCCC-CT-TCTAAGCTGGCTC--TATGTGTGTGTGGC-CGG--GGCGGGCAG-TGGG----CATTCCATGTCAGCATCCTAGAAAGAACAAATAAAC---- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177747 105 + 218577 ACGGTTGTG-TTATGGGAGCTGCCC-CT-TCTAAGCTGGCTC--TGTGTGTGTGTGGC-CGG--GGCGGGCAG-TGGG----CATTCCACGTCAGCATCCTAGAAAGAACAAATAAAC---- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89591971 106 - 91010382 ACGGTTGTG-TTATGGGAGCTGCCC-CT-TTTAAGCTGGCTC--TGTGTGTGTGTGGC-GGG--GGTGGGCAG-TGGG----TATTCCACGTCAGCATCCTAGAAAGAACAAATCAACA--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 25744 105 + 930449 A--GTTGTG-TTATGGGAGCTGCCC-CT-TTTAAGCTGGCTC--TGTGTGTGTGTGGCTGGG--GGTGGGCAG-TGGG----TATTCCACGTCAGCATCCTAGAAAGAACAAATCAACA--- i manLeu1.NW_012107609v1 C 0 I 3655 s colAng1.NW_012116910v1 867625 109 + 1687011 ACGGTTGTG-TTATGGGAGCTGCCC-CT-TTTAAGCTGGCTCTGTGTGTGTGTGTGGCGGGG--GGCGGGCAG-TGGG----TATTCCACGTCAGCATCCTGGAAAGAACAAATAAAT-A-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141210 98 - 204313951 AAGATTTTA-TTATAGTAGCTGCGC-CT-TTTAAGCTAGGTC----------TGCGGCAGGG--GTGGGGTGG-GGGG----TATTCCACATGAACATTCTAGAGAGAACAAATAAAC---- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 103523 103 - 16417988 AAGATTTTG-TTATACTAGCTGCCC-CT-TTTAAGCTAGGTC--------TGTGTGGCAGGGTTGTGGGGTGGAGGGG----TATTCCACATGAACATTCTAGAAAGAACAAATAAAC---- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 203713 103 + 306014 AAGATTTTG-TTATAGTAGCTGCCT-CT-TTTAAGCTAGGTC--------TGTGTGGCGGGGTTGAGGGGTGGAGGGG----TATTCCACATGAACATTCTAGAAAGAACAAATAAAG---- i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 31300 84 + 2165740 AAAATTGCA-TTAGACTAGTTGCCAGCG-TTTAAACTAG-------------------------TGTGAGAAG-GGTA----CCTTCAACGTGAATATCCTAGAAAAAAGGAAATA------ i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30162951 113 - 42124431 aaGATTTCA-TGATAATAGCTGCCA-CTGTTGAAGCTAGCCa--tgtgtgtgtatgtgtgtg--tatgtgtatatgtgtCCTTATTCAACATGAACATCTTAGAAAGAAGAAACAAAT---G i canFam3.chr34 I 722 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=30299.000000 s hg38.chr3_KI270779v1_alt 30722 5 + 205312 TTTAG s panPan2.chrUn_NW_014024201v1 5302 5 + 190779 TTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855064 5 - 880730 TTGAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194821 5 + 180051392 TTTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259402 5 - 181584905 TTTAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177852 5 + 218577 TTTAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592077 5 - 91010382 TTTAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29504 5 + 930449 TTTAG i manLeu1.NW_012107609v1 I 3655 C 0 s colAng1.NW_012116910v1 867734 5 + 1687011 TTTAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141309 5 - 204313951 TTTAG i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 103627 5 - 16417988 CTTAG i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 203817 5 + 306014 CTTAG i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 31384 5 + 2165740 CTAAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30163064 5 - 42124431 CTTAG i canFam3.chr34 C 0 I 1445 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=288317.000000 s hg38.chr3_KI270779v1_alt 30727 48 + 205312 TGATCTCACTGTTTCTACTTACA------TTTGGTAT-----AATG-----TACTGTTTTTATT s panPan2.chrUn_NW_014024201v1 5307 48 + 190779 TGATCTCACTGTTTCTACTTACA------TTTGGTAT-----AATA-----TACTGTTTTTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855069 48 - 880730 TGATCTCACTGTTTCTACTTACA------TTTGGTAT-----AAAA-----TACTGTTTTTATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194826 48 + 180051392 TGATCTCACTGTTTCTACTTACA------GTTGGTGT-----AATA-----CACTGTTGTTATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259407 48 - 181584905 TGATCTCACTGTTTCTACTTACA------GTTGGTGT-----AATA-----CACTGTTGTTATT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177857 48 + 218577 TGATCTCACTGTTTCTACTTACA------GTTGGTGT-----AATA-----CACTGTTGTTATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592082 48 - 91010382 TGATCTCACTGTTTCTACTTACA------TTTGGTGT-----AATA-----CACTGTTGTTATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29509 48 + 930449 TGATCTCACTGTTTCTACTTACA------GTTGGTGT-----AATA-----CACTGTTGTTATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867739 48 + 1687011 TGATCTCACTGTTTCTACTTACA------TTTGGTGT-----AATA-----CACTGTTGTTATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141314 48 - 204313951 TGACCTCACTGTTTCTATTTACA------TTTGATAT-----AGCA-----TACTGtttttttt i calJac3.chr2 C 0 I 283 s saiBol1.JH378155 103632 48 - 16417988 TGACCTCACTGTTTCTACTTACA------TTTGGTAT-----AACA-----TACTGTTCTTATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 203822 48 + 306014 TGACCTCACTGTTTCTATTTACA------TTTGGTAT-----AATA-----TACTGTTCTTGTT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31389 53 + 2165740 AGATATCATTATTTCTATTTTAC------TTCGTTAT-----AACAAAATGCACTAGTCTTATT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164514 59 - 42124431 TGGACTCATGGTTTCTATTTTAATTTCGGTTTGGTATTGCAAAATA-----TACTGTTCTTTTT i canFam3.chr34 I 1445 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=380807.000000 s hg38.chr3_KI270779v1_alt 30775 80 + 205312 GGTGCTATTACCTATGTTAATAGGGCACTTTACAAAATTTTCAAGAACGTTTTTATTAAAATTATTTCAAAGACTTCTTT s panPan2.chrUn_NW_014024201v1 5355 80 + 190779 GATGCTATTACCTATGTTAATAGGGCACTTTACAAAATTTTCAAGAACGTTTTTATTAAAATTATTTCAAAGACTTCTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855117 80 - 880730 GGTGCTACTACCTATGTTAATAGGGCACTTTACAAAATTTTCAAGAACGTTTTTATTAAAATTATTTCAAAGACTTCTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 194874 80 + 180051392 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAAAGTTTGTATTAAAATTATTTCAAAGACttcttt i rheMac8.chr6 C 0 I 133 s macFas5.chr6 180259455 80 - 181584905 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAACATTTATATTAAAATTATTTCAAAGACTTATTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177905 80 + 218577 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAAAGTTTGTATTAAAATTATTTCAAAGACTTCTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592130 80 - 91010382 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAACATTTGTATTAAAATTATTTCAAAGACTTATTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29557 80 + 930449 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAAAGTTTGTATTAAAATTATTTCAAAGACTTCTTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867787 80 + 1687011 GGTGCTGTTACCTGTGTTAATAGGGCGGTTTACAAAAGTTTCAAGAACATTTGTATTAAAATTATTTCAAAGACTTCTTT i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 103680 79 - 16417988 GGAACTATTATCTATGTCAATAGAGCACTTTACAACATTTTCAAGAATGTTTGTATTTAGA-TATTTCAAAAGCTTCATT i saiBol1.JH378155 C 0 I 4 s cebCap1.NW_016108150v1 203870 79 + 306014 GGAACTATTACCTATGTTAATAGAGCACTTTACAAAATTTTCAAGAACGTTCGTATTTAGA-TATTTCAAAAGCTTCATT i cebCap1.NW_016108150v1 C 0 I 4 s otoGar3.GL873745 31442 62 + 2165740 GGTGCTGTTA----TGTTAATATGGTGCTT--------TTTCAAGAGTGTTTGTATTAAAATTCTTTCAAAGAT------ i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164573 69 - 42124431 GAAGCTAATACCTTT----ATACTGTACTTTATAAAATTTTCAAGAACATTTGTATTAAAATTCTCT----GACTTG--- i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e calJac3.chr2 141362 283 - 204313951 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=5159.000000 s hg38.chr3_KI270779v1_alt 30855 1 + 205312 C s panPan2.chrUn_NW_014024201v1 5435 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855197 1 - 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180259535 1 - 181584905 C i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177985 1 + 218577 C i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592210 1 - 91010382 C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29637 1 + 930449 C i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867867 1 + 1687011 C i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 103763 1 - 16417988 C i saiBol1.JH378155 I 4 C 0 s cebCap1.NW_016108150v1 203953 1 + 306014 C i cebCap1.NW_016108150v1 I 4 C 0 s otoGar3.GL873745 31504 1 + 2165740 C i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164642 1 - 42124431 T i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e calJac3.chr2 141362 283 - 204313951 I e rheMac8.chr6 194954 133 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=91031.000000 s hg38.chr3_KI270779v1_alt 30856 15 + 205312 TTAAAATATGATTTT s panPan2.chrUn_NW_014024201v1 5436 15 + 190779 TTAAAATATGATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855198 14 - 880730 TT-AAATATGATTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195087 15 + 180051392 TTAAAATATGATTTT i rheMac8.chr6 I 133 C 0 s macFas5.chr6 180259536 15 - 181584905 TTAAAATATGATTTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 177986 15 + 218577 TTAAAATATGATTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592211 15 - 91010382 TTAAAATATGATTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29638 15 + 930449 TTAAAATATGATTTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867868 15 + 1687011 TTAAAATATGATTTT i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 103764 15 - 16417988 TTAAAATAGGATTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 203954 15 + 306014 TTAAAATAGGATTTT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31505 15 + 2165740 GTAAAATGTGATTTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164643 15 - 42124431 TTAAGATATGATTTT i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532172 19 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e calJac3.chr2 141362 283 - 204313951 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=344841.000000 s hg38.chr3_KI270779v1_alt 30871 75 + 205312 ACCATGTAAAAAATTATACTAAGGTAGAAGAATATTCGTTCTTTCTC-------------ATTTTCTGAAAAAAGAAA----AAA---CTAAATT s panPan2.chrUn_NW_014024201v1 5451 74 + 190779 ACCATGTAAAAAATTATACTAAGGTAGAAGAATATTCGTTCTTTCTC-------------ATTTTCTGAAAAAAGAAA----AA----CTAAATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855212 75 - 880730 ACCATGTAAAAAATTATACTAAGGTAGAAGAATATTCGTTCTTTCTC-------------ATTTTCTGAAAAAAGAAA----AAA---CTAAATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195102 78 + 180051392 ACCATGACAAAAATTATGTTAAAGT-GAAGAATATTTGTTCTTTCTC---------GTTTATTTTCTGAAAAAAGAAA----AAA---CTGAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259551 79 - 181584905 ACCATGACAAAAATTATGTTAAAGTAGAAGAATATTTGTTCTTTCTC---------GTTTATTTTCTGAAAAAAGAAA----AAA---CTGAATT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 178001 79 + 218577 ACTTTGTCAAAAATTATACTAAGGTGGAAGAATATTTGTTCTTTCTC---------ATTCATTTTCTGAAAAAAGAAA----AAA---CTGAATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592226 79 - 91010382 ACCATGACAAAAATTATGTTAAGGTAGAAGAATATTTGTTCTTTCTC---------ATTTATTTTCTGAAAAAAGAAA----AAA---CTGAATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29653 79 + 930449 ACTTTGTCAAAAATTATACTAAGGTGGAAGAATATTTGTTCTTTCTC---------ATTCATTTTCTGAAAAAAGAAA----AAA---CTGAATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867883 83 + 1687011 ACCATGTCAAAAATTATGTTAAGGTAGAAGAATATTTGTTCTTTCGC---------GTTCATTTTCTGAAAAAAGAAAAAACAAA---CTGAATT i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 103779 76 - 16417988 ACTATTT--AAAAATATACTAAGGAGGAAGAATATTTGTTCTAATTC-------------ATTTTCTGAAAAAAAGAA----AAAACCCTAAATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 203969 77 + 306014 ACCATTT-AAAAAACATACTAAGGAGGAAGAATACTTGTTCTAATTC-------------ATTTTCTGAAAAAAAGAA----AAAATCCTAAATT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31520 87 + 2165740 ACCGTTT--AAAATTATACTAAGGCAGGA-AATATTTGTTCTTTTTACTTTTTTAAATTTACTTTCTGAGAAAAAGGA----AAAAC-CTAAATT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164658 73 - 42124431 ACCAATTTTAAAATTATACTAAAACAGAAGAATATTCTTTTTAGTTT-----TTAGATTCATTTTCTGGGGAAAAATT----------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532191 74 + 913073 ACCACTTTAAAAATTATACTAAGGTAGAA-AATCTTTGTTCTTTTTT---------AGTCCTGTTCTGAAAAAA--------CCA---TTGAATT i dasNov3.JH577625 I 19 C 0 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e calJac3.chr2 141362 283 - 204313951 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=279908.000000 s hg38.chr3_KI270779v1_alt 30946 44 + 205312 AGCTTATGTCAATAAAAAC----------AGACTAGAAATTGGAGAAATGAAGA s panPan2.chrUn_NW_014024201v1 5525 44 + 190779 AGCTTATGTCAATAAAAAC----------AGACTAGAAATTGGAGAAATGAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855287 46 - 880730 AGCTTATGTCAATAAAAACAG--------AGACTAGAAATTGGAGAAATGAAGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195180 46 + 180051392 AGCTTATGTCAATAAAAACAG--------AGACTAGAAATTGGAGAAATGGAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259630 46 - 181584905 AGCTTATGTCAATAAAAACAG--------AGACTAGAAATTGGAGAAATGGAGA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 178080 44 + 218577 AGCTTATGTCAATAAAAAC----------AGACTAGAAATTGGAGAAATGGAGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592305 46 - 91010382 AGCTTATGTCAATAAAAACAG--------AGACTAGAAATTGGAGAAATGGAGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29732 44 + 930449 AGCTTATGTCAATAAAAAC----------AGACTAGAAATTGGAGAAATGGAGA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 867966 44 + 1687011 AGCTTATGTCCATGAAAAC----------AGACTAGAAATTGGAGAAAGGGAGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141645 52 - 204313951 AGCTTATGTCAATAAAAACAAAGAAA--TAGTCTAGAAATTAGAGAAATGAAGA i calJac3.chr2 I 283 C 0 s saiBol1.JH378155 103855 52 - 16417988 AGCTTATGTCAATAAAAACAAAGAAA--TAGACTAGAAATTGGAGAAATGAAGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204046 51 + 306014 AGC-TATGTCAATAAAAACAAAGAAA--TAGACTAGAAATTGGAGAAATGAAGA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31607 46 + 2165740 GGGTTATATAAAAAAAAATGT--------AGATTTAAAATTGGAGAATTGAAGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164731 54 - 42124431 GGCTTATATCGATAAAAACAAATATATTTAAAGTTGAAATTGAAGAATTTAAGA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 532265 44 + 913073 GGCTTATGTCAATAAAAAT----------GAAGTTCAGGTTTTAGAATTTAAAA i dasNov3.JH577625 C 0 I 7895 e mm10.chr13 46073600 2297 - 120421639 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=205185.000000 s hg38.chr3_KI270779v1_alt 30990 51 + 205312 ATAAT-T-TTTTAT---------CCCACATAA--------TAAGTAATTTGTGAATTGCAAG-----TATTTCTA s panPan2.chrUn_NW_014024201v1 5569 51 + 190779 ATAAT-T-TTTTAT---------CCCGCATAA--------TAAGTAATTTGTGAATTGCAAG-----TATTTCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855333 51 - 880730 ATAAT-T-TTTTAT---------CCCACATAA--------TAAGTAATTTGTGAATTGCAAG-----TATTTCTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195226 51 + 180051392 ATAAT-T-TTTTAT---------TCCACATAA--------TAAGTAATTTCTGAATTGCAAG-----TATTTCTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259676 51 - 181584905 ATAAT-T-TTTTAT---------TCCACATAA--------TAAGTAATTTCTGAATTGCAAA-----TATTTCTA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 178124 51 + 218577 ATAAT-T-TTTTAT---------CCCACATAA--------CAAGTAATTTCTGAATTGCAAG-----TATTTCTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592351 51 - 91010382 ATAAT-T-TTTTAT---------TCCACATAA--------TAAGTAATTTCTGAATTGCAAA-----TATTTCTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29776 51 + 930449 ATAAT-T-TTTTAT---------CCCACATAA--------CAAGTAATTTCTGAATTGCAAG-----TATTTCTA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868010 51 + 1687011 ATAAT-T-TTTTAT---------TCCACATAA--------TAAGTAATTTCTGAATTGCAAA-----TATTTCTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141697 49 - 204313951 ATTTT-TCTCTTGT------------ACAGAA--------TAAATAATTTCTGAATTGCAAG-----TATTTCTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 103907 44 - 16417988 ATTTT-T-TCATGT------------ACACAA--------TAAA----TTCTGAATTGCAAG-----TATTTCTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204097 44 + 306014 ATTAT-T-TCTTGT------------ACAGAA--------TAAA----TTCTGAATTGCAAG-----TATTTCTA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31653 69 + 2165740 AAATTGC-TTTTATTAGTTGAGATCTACTTAAAAATCTAGCAAACTACTTTGTAATTGGAAT-----AAAACTCA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30164785 53 - 42124431 ATATTGC-TTTTGT-----------CAGTTAA--------GATCTA--CTTAGAAATCCAAGAAACTTATTTGTA i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=57612.000000 s hg38.chr3_KI270779v1_alt 31041 8 + 205312 AATACTTG s panPan2.chrUn_NW_014024201v1 5620 8 + 190779 AATACTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855384 8 - 880730 AATACTTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195277 8 + 180051392 AATACTCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259727 8 - 181584905 AATACTTG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 178175 8 + 218577 AATACTTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592402 8 - 91010382 AATACTTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29827 8 + 930449 AATACTTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868061 8 + 1687011 AATACTCG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141746 8 - 204313951 AATACTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 103951 8 - 16417988 AATACTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204141 8 + 306014 AATACTTG i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 31722 8 + 2165740 AATGTTTG i otoGar3.GL873745 C 0 I 281 s mm10.chr13 46075897 8 - 120421639 AATTCTTA i mm10.chr13 I 2297 C 0 s canFam3.chr34 30164838 4 - 42124431 ----ATTG i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=46897.000000 s hg38.chr3_KI270779v1_alt 31049 8 + 205312 AAGACATC s panPan2.chrUn_NW_014024201v1 5628 8 + 190779 AAGACATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855392 8 - 880730 AAGACGTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195285 8 + 180051392 AAGACATC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259735 8 - 181584905 AAGACATC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 178183 8 + 218577 AAGACATC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592410 8 - 91010382 AAGACCTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29835 8 + 930449 AAGACATC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868069 8 + 1687011 AAGACATC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141754 8 - 204313951 AAGACATC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 103959 8 - 16417988 AAGACATC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204149 8 + 306014 AAGACATC i cebCap1.NW_016108150v1 C 0 C 0 s mm10.chr13 46075905 8 - 120421639 TGATCACT i mm10.chr13 C 0 C 0 s canFam3.chr34 30164842 8 - 42124431 GAGCTATC i canFam3.chr34 C 0 I 332 e otoGar3.GL873745 31730 281 + 2165740 I e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=277290.000000 s hg38.chr3_KI270779v1_alt 31057 50 + 205312 CCTCACATCCCCTCTTCTGATTGCTGAGT-GCA--TAATTTCCTAAAGC-tttt s panPan2.chrUn_NW_014024201v1 5636 50 + 190779 CCTCACATCCCCTCTTCTGATTGCTGAGC-GCA--TAATTTCCTAAAGC-tttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855400 51 - 880730 CCTCACATCCCCTCTTCTGATTGCTGAGTGGCA--TAATTTCCTAAAGC-tttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195293 50 + 180051392 CCTCACATCCCCTCTTCTGATTGCTGAGT-GTA--TTATTTCCTAAAGc-tttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259743 51 - 181584905 CCTCACATCCCCTCTTCTGATTGCTGAGT-GTA--TTATTTCCTAAAGCTTTTt i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 178191 50 + 218577 CCTCACATCCCCTCTTCTGATTGCTGAGT-GTA--TTATTTCCTAAAGC-TTtt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592418 51 - 91010382 TCTCACATCCCCTCTTCTGATTGCTGAGT-GTA-TTTATTTCCTAAAGC-tttt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 29843 50 + 930449 CCTCACATCCCCTCTTCTGATTGCTGAGT-GTA--TTATTTCCTAAAGC-TTTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868077 51 + 1687011 TCTCACATCCCCTCTTCTGATTGCTGAGT-GTA-TTTATTTCCTAAAGC-tttt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141762 44 - 204313951 TCTCACATCCCCTCTTCTGATTGTTGAGT-GTA--TTGTTTCCTAAA------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 103967 50 - 16417988 TCTCACATCCCCTCTTCTGATCGTTGAGT-GTA--TAATTTCCTAAAAC-tttt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204157 50 + 306014 TCTCACATCCCCTCTTCTGATTGTTGAGT-GTA--TAATTTCCTAAGAC-tttt i cebCap1.NW_016108150v1 C 0 C 0 s mm10.chr13 46075913 52 - 120421639 CCTGACTTCCCCGTTTCTGATTACTAAGT-GTACTTGACTACCTAGAAC-TTTT i mm10.chr13 C 0 C 0 e otoGar3.GL873745 31730 281 + 2165740 I e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30164850 332 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=36658.000000 s hg38.chr3_KI270779v1_alt 31107 19 + 205312 ttttttcttttgttttttt s panPan2.chrUn_NW_014024201v1 5686 17 + 190779 ttttt-cttttgtttttt- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855451 16 - 880730 tttt--cttttgtttttt- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195343 16 + 180051392 tttt--cttttcttttct- i rheMac8.chr6 C 0 I 20 s macFas5.chr6 180259794 16 - 181584905 tttt--tttttcttttct- i macFas5.chr6 C 0 I 21 s cerAty1.NW_012004452v1 178241 16 + 218577 tttt--ttttccttttct- i cerAty1.NW_012004452v1 C 0 I 11 s chlSab2.chr4 89592469 16 - 91010382 tttc--ttttcttttttt- i chlSab2.chr4 C 0 I 57 s manLeu1.NW_012107609v1 29893 16 + 930449 Tttt--ttttccttttct- i manLeu1.NW_012107609v1 C 0 I 14 s colAng1.NW_012116910v1 868128 16 + 1687011 tttt--cttttctttttt- i colAng1.NW_012116910v1 C 0 I 4 s calJac3.chr2 141806 11 - 204313951 -ttt--tttttttt----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104017 12 - 16417988 tttt--tttttttt----- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204207 11 + 306014 -ttt--tttttttt----- i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 31730 281 + 2165740 I e mm10.chr13 46075965 0 - 120421639 C e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30164850 332 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=428956.000000 s hg38.chr3_KI270779v1_alt 31126 115 + 205312 ggagacattgtctcgctctgtcgcccaggccggagtacagtggcacagtctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcttcccaagtagc s panPan2.chrUn_NW_014024201v1 5703 115 + 190779 ggagacattgtctcgctctgtcgcccaggccggagtacagtggcacagtctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcttcccaagtagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855467 115 - 880730 ggagacattgtctcgctctgtcgcccaggccggagtacagtggcacagtctcggctcactggaacctctccctcctgggttcaagcgattctcgtgcctcagcttcccaagtagc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195379 115 + 180051392 ggagactttgtctcgctctgttgcccaggctggagtacagtggcagagtctaggctcactgcaacctctgcctcctgtgttcaagcgattctcctgcctcagcctcccaagtagc i rheMac8.chr6 I 20 C 0 s macFas5.chr6 180259831 115 - 181584905 ggagacattgtctcgctctgttgcccaggctggagtgcagtggcagagtctaggctcactgcaacctctgcctcctgtgttcaagcgattctcctgcctcagcctcccaagtagc i macFas5.chr6 I 21 C 0 s cerAty1.NW_012004452v1 178268 113 + 218577 ggagacgttgtctcgctctgttgcccaggctggagtgcagtggcagagtctaggctctctgcaacctctgcctcctggcttccagcgattc-cctgcctcagcctcccaagtac- i cerAty1.NW_012004452v1 I 11 C 0 s manLeu1.NW_012107609v1 29923 115 + 930449 ggagacgttgtctcgctctgttgcccaggctggagtgcagtggcagagtctaggctcactgcaacctctgcctgctgggttcaagcgattctcctgcctcagcctcccaagtagc i manLeu1.NW_012107609v1 I 14 C 0 s colAng1.NW_012116910v1 868148 115 + 1687011 ggagacattgtctcgctctgtcgcccagactggagtgcagtggcagagtctaggctcactgcaacctctgcctcctgggttcaagtaattctcctgcctcaccctcccaagtagc i colAng1.NW_012116910v1 I 4 C 0 s calJac3.chr2 141817 102 - 204313951 tgagatagagtctcgctccattgcccaggctggagtgcagtgacg-------------ctgtagccactgcctcccgggttcaagccattctcctgcctcagccttccaagtagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104029 101 - 16417988 tgagaccaagtctcgctccatcatccaggctggagtgcagtgaca-------------ctgtagcttctgcctccc-ggttcaagccattctcttgcctcagcctccctagtagc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204218 102 + 306014 tgagaccaagtgtcgctccatctcccaggctggagtgcagtgaca-------------ccgtagcttctgcctcccgggttcaagctattctcctgcctcagcctcccaagtagc i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 31730 281 + 2165740 I e mm10.chr13 46075965 0 - 120421639 C e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30164850 332 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 19595 855 - 100774 M e chlSab2.chr4 89592485 57 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=458831.000000 s hg38.chr3_KI270779v1_alt 31241 85 + 205312 tgggattacaggtgcccgccaccacgaccagctaatt--------tttagtagagagggggttttgccatgttggccagactggtctcgaact s panPan2.chrUn_NW_014024201v1 5818 85 + 190779 tgggattacaggtgcccgccaccacgcccagctaatt--------tttagtagagagggggttttgccatgttggccagactggtctcgaact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855582 85 - 880730 tgggattacaggtgcccgccaccacgcccagctaatt--------tttagtagagagggggttttgccatgttggccagactggtctcgaact i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195494 85 + 180051392 tgggattacaggtgcccaccaccatgcccggctaatt--------tttagtagagacagggtttcgccatgttggccagactggtcttgaact i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180259946 85 - 181584905 tgggattacaggtgcccaccaccatgcccggctaatt--------tttagtagagacagggtttcgccatgttggccagactggtcttgaact i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 20450 85 - 100774 tgggattacaggtgcccaccaccatgcccggctaatt--------tttagtagagacagggtttcgccatgttggccagactggtcttgaact i macNem1.NW_012013899v1 M 855 C 0 s cerAty1.NW_012004452v1 178381 85 + 218577 tgggattacaggtgcccaccaccatgcctggctaatt--------tttagtacagatggggttccgccatgttggccagactggtcttgaact i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 30038 85 + 930449 tgggattacaggtgcctgccaccatgcccggctaatt--------tttagtacagatggggtttcgccatgttggccagactggtcttgaact i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868263 85 + 1687011 tgggattacagctgcctgccaccatgcccggctaatt--------tttagtacagatggggtttcgccatgttggccagactgggcttgaact i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 141919 93 - 204313951 tgggattacaggtgcccgccaccacgcctggctaatttttgtgtgtttagtagagatggggttttgccgtgttggccagactggtctcgaact i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104130 93 - 16417988 tgggattacaggtgcctgccaccacacttagctaatttttgtgtttttagtagagatggggttttgccacgttggccagactggtcttgaact i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204320 93 + 306014 tgggattacaggtgcctgccaccacgcttagctaatttttgtgtgtttagtagagatggggttttgccatgttggccagactggtcttgaact i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 31730 281 + 2165740 I e mm10.chr13 46075965 0 - 120421639 C e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30164850 332 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e chlSab2.chr4 89592485 57 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200022306 1461 + 202621043 I a score=367306.000000 s hg38.chr3_KI270779v1_alt 31326 65 + 205312 cctga-cttcaggtgatctgcccac-cttggcctccc-aaaatgctggga-ttac-aggcatga-gccacc s panTro5.chr3 200023767 63 + 202621043 cctga-cttcaggtgatctgcc-ac-ct-ggcctccc-aaaatgctggga-ttac-aggcatga-gccacc i panTro5.chr3 I 1461 C 0 s panPan2.chrUn_NW_014024201v1 5903 65 + 190779 cctga-cttcaggtgatctgcccac-cttggcctccc-aaaatgctggga-ttac-aggcatga-gccacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855667 67 - 880730 cctga-cttcaggtgatctgcccac-cttggcctcccaaaaatgctggga-tgac-aggcgtgaggccacc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195579 65 + 180051392 cctga-cttcaagtgttccacccac-cttggcctccc-aaaatgctggga-ttac-aggcagga-gccacc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260031 65 - 181584905 cctga-cttcaagtgttccacccac-cttggcctccc-aaaatgctggga-ttac-aggcagga-gccacc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 20535 65 - 100774 cctga-cttcaagtgttccacccac-cttggcctccc-aaaatgctggga-ttac-aggcagga-gccacc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178466 69 + 218577 cctgaccttcagctgatccacccactcttggcctccc-aaaatgctgggatttacaaggcatga-gccact i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 30123 65 + 930449 cctga-cttcaggtgatccacccac-cttggcctccc-aaaatgctggga-ttac-aggcatga-gccatt i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868348 65 + 1687011 cctga-cttcaggtgatccacccac-cctggcctccc-aaaatgctggga-ttac-aggcagga-gccacc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142012 65 - 204313951 cctga-cctcaggtaatctgcccac-ctcagcttccc-aaagtgctggga-ttac-aggcataa-gccact i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104223 65 - 16417988 cctga-cctctggtaatctgcccac-ctcagcttccc-aaagtgctggga-ttac-aggcatga-gtcact i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204413 65 + 306014 cctga-cctctggtaatctgcccac-ctcagcttccc-aaagtgctggga-ttac-aggcataa-gccacg i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 31730 281 + 2165740 I e mm10.chr13 46075965 0 - 120421639 C e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30164850 332 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e chlSab2.chr4 89592485 57 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=125664.000000 s hg38.chr3_KI270779v1_alt 31391 20 + 205312 acg-cccagccCCTAAAACTA s panTro5.chr3 200023830 20 + 202621043 gcg-cccagccCCTAAAACTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 5968 20 + 190779 gcg-cccagccCCTAAAACTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855734 21 - 880730 gcgcccCAGCCCCTAAAACTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195644 20 + 180051392 gtg-cccagccCCTAAAACTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260096 20 - 181584905 gtg-cccagccCCTAAAACTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 20600 20 - 100774 gtg-cccagccCCTAAAACTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178535 20 + 218577 gcg-cccagccCCTAATACTA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 30188 20 + 930449 gcg-cccagccCCTAAAACTA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868413 20 + 1687011 acg-cccagccCCTAAAACTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142077 20 - 204313951 gtg-cccagccCCTAAAACTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104288 20 - 16417988 gca-cccagccCCTAAAACTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204478 20 + 306014 gca-cccagccCCTAAAACTA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32011 20 + 2165740 ATG-TATTATTTTCTTAATTG i otoGar3.GL873745 I 281 C 0 e mm10.chr13 46075965 0 - 120421639 C e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30164850 332 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e chlSab2.chr4 89592485 57 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=26194.000000 s hg38.chr3_KI270779v1_alt 31411 3 + 205312 TTC s panTro5.chr3 200023850 3 + 202621043 TTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 5988 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855755 3 - 880730 TTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195664 3 + 180051392 TTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260116 3 - 181584905 TTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 20620 3 - 100774 TTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178555 3 + 218577 TTC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 30208 3 + 930449 TTC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868433 3 + 1687011 TTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142097 3 - 204313951 TTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104308 3 - 16417988 TTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204498 3 + 306014 TTC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32031 3 + 2165740 TCC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30165182 3 - 42124431 TTC i canFam3.chr34 I 332 C 0 e mm10.chr13 46075965 0 - 120421639 C e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e chlSab2.chr4 89592485 57 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=813564.000000 s hg38.chr3_KI270779v1_alt 31414 110 + 205312 TTGATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCCGCCAGCAGAATGGAAA-ACGTATCCCCTAAATGGCTGGCCAACCTTAGCATAT-GGGACAGTGTGACCT s panTro5.chr3 200023853 110 + 202621043 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCCGCCAGCAGAATGGAAA-ACGCATCCCCTGAATGGCTGGCCAACCTTAGCATAT-GGGACAGTGTCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 5991 110 + 190779 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCCGCCAGCAGAATGGAAA-ACGCATCCCCTGAATGGCTGGCCAACCTTAGCATAT-GGGACAGTGTCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855758 111 - 880730 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCCGCCAGCAGAATGGAAA-ACATATCCCCTAAATGGCTGGCCAACCTTAGCATATGGGGACAGTGTGACCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195667 109 + 180051392 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCAGCTAGCAGAATGGAAA-ATGTATCCTCTAAATGACTGGCCAACCTTAGCATAT--GGACAGTGTCACCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260119 109 - 181584905 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCAGCTAGCAGAATGGAAA-ATGTATCCTCTAAATGACTGGCCAACCTTAGCATAT--GGACAGTGTCACCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 20623 109 - 100774 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCAGCTAGCAGAATGGAAA-ATGTATCCTCTAAATGACTGGCCAACCTTAGCGTAT--GGACAGTGTCACCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178558 109 + 218577 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCAGCTAGCAGAATGGAAA-ATGTATCCTCTAAATGACTGGCCAACCTTAGCATAT--GGACAGTGTCACCT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012107609v1 30211 109 + 930449 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCACCCAGCAGAATGGAAA-ATCTGTCCTCTAAATGACTGGCCAACCTTAGCGTAT--GGACAGTGTCACCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868436 109 + 1687011 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCACCCAGCAGAATGGAAA-ATATATCCTCTAAATGACTGGCCAACCTTAGCATAT--GGACACTGTCACCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142100 109 - 204313951 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATGCAGCCAGCAGAATGGAAA-ACACATCCCCTAAATGGCTGGCCAACCTTAGCACAT--GGAGAATGTCACCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104311 109 - 16417988 TTTATGATATTTCTGAGACT---AT--------tca-------gtggtcttctaaaatgcagccagcagaatagaaa-acacatcccctaaatggctgaccagccttagcacat--ggagaatgtcacct i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204501 109 + 306014 TTTATGATATTTCTGAGACT---AT--------TCA-------GTGGTCTTCTAAAATTCAGCCAGCAGAATAGAAA-ACACATCCCCTAAATGGCTGGCCAGCCTTAACACAT--GGAGAATGTCACCT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32034 109 + 2165740 TTTATGATATTTCAGGAACT---TCTTACATTATCA-------GTGATCTTATAAAATACAGTCAGCAGGATAGAAA-ACATACCCCCTGAA--------CGATCTTAGCATGT--GGAAAATGTCTCTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46075965 110 - 120421639 GGGGGGATATGTCCAAGTCT---CT--------TCATTATATTTTGGTCTTTTTAAGTAGAGTAAGTAAAACGAAAA-ATGTATTCTCTTAATGGCTGACTGGATT---CACAC-TGGACTGATTT---- i mm10.chr13 C 0 C 0 s canFam3.chr34 30165185 104 - 42124431 TTTGTGAGATTACTAAGATTTCATT--------TTA-------TCCGTTCTCTAAAATGCAGTCAGCAGAATGGAAAGACATGCCTCATAAGT---TGG------TTCACATAT--GAAGAATGTGGCCT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e chlSab2.chr4 89592485 57 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=525.000000 s hg38.chr3_KI270779v1_alt 31524 1 + 205312 C s panTro5.chr3 200023963 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6101 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855869 1 - 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s chlSab2.chr4 89592542 1 - 91010382 C i chlSab2.chr4 I 57 C 0 s manLeu1.NW_012107609v1 30320 1 + 930449 C i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 142209 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104420 1 - 16417988 g i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204610 1 + 306014 G i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32143 1 + 2165740 C i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076075 1 - 120421639 C i mm10.chr13 C 0 C 0 s canFam3.chr34 30165289 1 - 42124431 C i canFam3.chr34 C 0 I 17 e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e macNem1.NW_012013899v1 20732 0 - 100774 C e colAng1.NW_012116910v1 868545 0 + 1687011 C e cerAty1.NW_012004452v1 178667 0 + 218577 C e macFas5.chr6 180260228 0 - 181584905 C e rheMac8.chr6 195776 0 + 180051392 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=129249.000000 s hg38.chr3_KI270779v1_alt 31525 22 + 205312 TCTCACACAGAGCCA--CTAAAAA s panTro5.chr3 200023964 22 + 202621043 TCTCACACAGAGCCA--CTAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6102 22 + 190779 TCTCACGCAGAGCCA--CTAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855870 21 - 880730 TCTCACACAGAGCCA--CT-AAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195776 21 + 180051392 -CTCACACACAGCCA--CTAAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260228 21 - 181584905 -CTCACACACAGCCG--CTAAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 20732 21 - 100774 -CTCACACACAGCCG--CTAAAAA i macNem1.NW_012013899v1 C 0 I 313 s cerAty1.NW_012004452v1 178667 21 + 218577 -CTCACACACAGCCA--CTAAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592543 22 - 91010382 TCTCACACACAGCCG--CTAAAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30321 22 + 930449 TCACACACACAGCCG--CTAAAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868545 19 + 1687011 ---CTCTCACAGCCG--CCAAAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142210 22 - 204313951 TCTCACACTGAGCCA--CTGAAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104421 22 - 16417988 tctcacactgagcca--ctaAAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204611 22 + 306014 TCTCACACTGAGCCA--CTAAAAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32144 18 + 2165740 TCTGACACTGGGCCA--AGA---- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076076 24 - 120421639 ACTGACACCAGGTTAACCTTGGAT i mm10.chr13 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30165290 17 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=26713.000000 s hg38.chr3_KI270779v1_alt 31547 5 + 205312 CTAAA s panTro5.chr3 200023986 5 + 202621043 CTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6124 5 + 190779 CTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855891 5 - 880730 CTAAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195797 5 + 180051392 CTAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260249 5 - 181584905 CTAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21066 5 - 100774 CTAAA i macNem1.NW_012013899v1 I 313 C 0 s cerAty1.NW_012004452v1 178688 5 + 218577 CTAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592565 5 - 91010382 CTAAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30343 5 + 930449 CTAAA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868564 5 + 1687011 CTAAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142232 5 - 204313951 CTAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104443 4 - 16417988 CT-AA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204633 5 + 306014 CTAAA i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32162 3 + 2165740 --TTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076100 5 - 120421639 ATGGG i mm10.chr13 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e canFam3.chr34 30165290 17 - 42124431 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=84993.000000 s hg38.chr3_KI270779v1_alt 31552 12 + 205312 CACTAAAACCAG s panTro5.chr3 200023991 12 + 202621043 CACTAAAACCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6129 12 + 190779 CACTAAAACCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855896 12 - 880730 CACTAAAACCAG i gorGor5.CYUI01015759v1 C 0 I 1 s rheMac8.chr6 195802 12 + 180051392 CGCTAAAACCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260254 10 - 181584905 CGCTAAAACC-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21071 12 - 100774 CACTAAAACCAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178693 12 + 218577 CACTAAAACCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592570 10 - 91010382 CACTAAAACC-- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30348 12 + 930449 CACTAAAACCAG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868569 12 + 1687011 CACTAAAACCAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142237 12 - 204313951 CACTAAAAGCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104447 12 - 16417988 CACTAAAAGCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204638 12 + 306014 CGCTAAAAGCAC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32165 12 + 2165740 CACTAAAAGCAG i otoGar3.GL873745 C 0 I 612 s mm10.chr13 46076105 12 - 120421639 GAGTTAGAGAAG i mm10.chr13 C 0 C 0 s canFam3.chr34 30165307 12 - 42124431 CATTAATACTAG i canFam3.chr34 I 17 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=301958.000000 s hg38.chr3_KI270779v1_alt 31564 51 + 205312 TTTTCTTGAGTAAAGGTTTCTAAGATGGAAAATTTAAGCAGTGAGATATGT-- s panTro5.chr3 200024003 51 + 202621043 TTTTCTTGAGTAAAGCTTTCTAAGATGGAAAATTTAAGCAGCGAGATATGT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6141 51 + 190779 TTTTCTTGAGTAAAGCTTTCTAAGATGGAAAATTTAAGCAGCGAGATATGT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855909 51 - 880730 TTTTCTTGAATAAAGGTTGCTAAGATGGAAAATTTAAGCAGCGAGATCTGT-- i gorGor5.CYUI01015759v1 I 1 C 0 s rheMac8.chr6 195814 39 + 180051392 G------------TGGTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260264 38 - 181584905 -------------AGGTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21083 51 - 100774 TTTTCTTGGGTAAAGGTTTCTAAGACGGAAAATTTAGGCAGCAAGATGTGT-- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178705 51 + 218577 TTTTCTTGGGTAAAGGTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGT-- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89592580 38 - 91010382 -------------AGGTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGT-- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30360 51 + 930449 TTTTCTTGGGTAAAGGTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGT-- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868581 51 + 1687011 TTTTCTTGGGTAAAGTTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGT-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142249 49 - 204313951 TTTTCTTGGGTAAAGTTTTCTAAGATGGAATATTTAAG--ATAACATGTGG-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104459 47 - 16417988 TTTTCTTGGGTAAAGTTTTCTAAGATGGAATATTTAAG--ATAAC--GTGG-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204650 49 + 306014 TTTTCTTGGGTAAAGTTTTCTAAGATGGAATATTTAAG--ATAACATGTGG-- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 32789 49 + 2165740 TTTTCTTGGATAAATGTTTCTAAGATGGGACATTTAAGC--CAAGATTTAA-- i otoGar3.GL873745 I 612 C 0 s mm10.chr13 46076117 35 - 120421639 -TTTCCTGAGGAAGG----CTAAGGGTAACCAGTCAGGGA------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30165319 51 - 42124431 TTTTCTTGAATAAGTGTTTATAGAGTGGgacatttaagc--caaaccttggga i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e aotNan1.NW_018494784v1 66645 448 + 211231 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=535325.000000 s hg38.chr3_KI270779v1_alt 31615 57 + 205312 CAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGCATCA-----------------------------------ACCAGGCAG-GGG-----------------------AGAGTGTG s panTro5.chr3 200024054 57 + 202621043 CAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGCAGCA-----------------------------------ACCAGGCAG-GGG-----------------------AGAGTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6192 57 + 190779 CAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGCAGCA-----------------------------------ACCAGGCAG-GGG-----------------------AGAGTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 855960 56 - 880730 CAAGTTGTAGACGTTGGCCAGG-AAAAGCCAGCAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195853 57 + 180051392 CAAATTGTAGACATTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260302 57 - 181584905 CAAATTGTAGACATTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21134 57 - 100774 CAAATTGTAGACGTTGACCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 178756 57 + 218577 CAAGTTGTAGACATTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i cerAty1.NW_012004452v1 C 0 I 2327 s chlSab2.chr4 89592618 57 - 91010382 CAAATTGTAGACATTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30411 57 + 930449 CAAGTTGTAGACGTTGACCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGAGTGTG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868632 57 + 1687011 CAAATTATAGACGTTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAG-GGG-----------------------AGCGTGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142298 58 - 204313951 CAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGGAGCG-----------------------------------GCCAGGCAGGGGG-----------------------AGAGTGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104506 58 - 16417988 CAAGTTGTAGACGCTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAGTGGG-----------------------AGAGTGTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204699 58 + 306014 CAAGTTGTAGACACTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAGCGGG-----------------------AGAGTGTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 67093 58 + 211231 CAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCAGGGGG-----------------------AGAGTGTG i aotNan1.NW_018494784v1 I 448 C 0 s otoGar3.GL873745 32838 69 + 2165740 TGAGTCGTAGAGGTC-----------AGCCAGGGGCA-----------------------------------GTCAGGCAG-AGGGAGCATCTCTGGGCATGACCAGAAGAGTGTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076152 28 - 120421639 ---------------------GAACAGGCCTG-------------------------------------------ATCCAT-GAG-----------------------AGGGTGTG i mm10.chr13 C 0 C 0 s canFam3.chr34 30165370 91 - 42124431 -gagttgtagaagttagccagggaaaggccagaggcaagtgtccagacagagggaacagcaCCGTGGAGTATGACAGACAA-GAG-----------------------AGGATGTG i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=399273.000000 s hg38.chr3_KI270779v1_alt 31672 63 + 205312 -------------------------------------------------------CATCCGACATCC---TCCTGTG--TGATGAAGGGATGAC-ACC--TCTTCCCTCT------GGGC----TGTC-AGCCTTTA------------ s panTro5.chr3 200024111 63 + 202621043 -------------------------------------------------------CATCCGACATCC---TCCTGTG--TGATGAAGGGATGAC-ACC--TCTTCCCTCT------GGGC----TGTC-AGCCTTTA------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6249 63 + 190779 -------------------------------------------------------CATCCGACATCC---TCCTGTG--TGATGAAGGGATGAC-ACG--TCTTCCCTCT------GGGC----TGTC-AGCCTTTA------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856016 64 - 880730 -------------------------------------------------------CATCCAGCATCC---TCCTGTG--TGATGAAGGGATGAC-ACC--TCTTCCCTCT------GGGC----TGTCAAGCCTTTA------------ i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195910 63 + 180051392 -------------------------------------------------------CATCCAGCATCC---TCCTGTG--TGATGAAGGAATGAC-ACC--TCCTCCCTCT------GGGC----TGTC-AGCTTTTA------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260359 63 - 181584905 -------------------------------------------------------CATCCAGCATCC---TCCTGTG--TGATGAAGGAATGAC-ACC--TCCTCCCTCT------GGGC----TGTC-AGCTTTTA------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21191 63 - 100774 -------------------------------------------------------CATCCAGCATCC---TCCTGTG--TGATGAAGGAATGAC-ACC--TCCTCCCTCT------GGGC----TGTC-AGCTTTTA------------ i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592675 63 - 91010382 -------------------------------------------------------CATCCAACATCC---TCCTGTG--TGATGAAGGGATGAC-ACC--TCGTCCCTCT------GGGC----TGTC-AGCTTTTA------------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30468 63 + 930449 -------------------------------------------------------CATCCACCATCC---TCCTGTG--TGATGAAGGGATGAC-ACC--TCCTCCCTCT------GGGC----TGTC-AGCTTTTA------------ i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868689 62 + 1687011 -------------------------------------------------------CACCCAACATCC---TCCTGTG--TGGTGAAGGGATGAC-ACC--TCGTCCCTCT-------GGC----TGTC-AGCTTTTA------------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142356 65 - 204313951 -------------------------------------------------------CATCTGACATCC---TCCTGTGTATGATGAAGGGATGAC-ACC--TCATCTTTCT------AGGC----CATC-AGCTTTTA------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104564 64 - 16417988 -------------------------------------------------------CGTCTGACATCC---TCCTGTGTGTGATGAA-GGATGAC-ACC--TCATCCCTCT------GGGC----TATC-AGCTTTTA------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204757 65 + 306014 -------------------------------------------------------TGTCTGACATCC---TCCTGTGTGTGACGAAGGGATGAC-ACC--TCGCCCCTCT------GGGC----TGTC-AGCTTTTA------------ i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 67151 65 + 211231 -------------------------------------------------------CGTCTGACATCC---TCCTGTGTGTGATGAAGGGATGAC-ACC--TCGTCCCTCT------GGGC----TATC-AGCTTTTA------------ i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 32907 65 + 2165740 ---------------------------------------------------------ACTGAAATCC---TTCTGTGCACGATAAAGGG-TTAC-ACCATTCATCTCTCT------GAACT---TGAC-GGTTTTTA------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076180 85 - 120421639 -------------------------------------------------------TGGCTAAAGTCTCGGTTATATA--TGCTAAAGGCATTATGATT--TCATCCCTAAGGTTAAGGGT----TACC-TTGTTTCAATAAGGAGTAGC i mm10.chr13 C 0 C 0 s canFam3.chr34 30165461 128 - 42124431 CCTAAAGCCCAGAACAGATGTGGAGAGTGGTAAAGCAGGTCTGTGATCACCTCTGGGCCTGGAGTCC---TCACATTAAGAGTGGAGGGATGAT-CCC--ACTGGTGCCT------AGGCGTCACAAC-AAGCAATA--------GAGC i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 532309 7895 + 913073 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1620753.000000 s hg38.chr3_KI270779v1_alt 31735 192 + 205312 CTGTTCCAGGATACAGATCTCCTGATTCAGGTGTCCAGTGCCTTTTG--AACT--GAC-CGCAAGCCCTCCTGG-ACGATTGGAACTGTA-ATGTGGAAAGGGCTCTGATGGAGCCGGTTAAAATGCTTCATTATTTGCAAAA---TACCACATACAGTAATACGATCTGGATGTC-TTTCCCCTCCTCCACTAAG-TAGCATA s panTro5.chr3 200024174 191 + 202621043 CTGTTCCAGGATACAGATCTCCTGATTCAG-TGTCCAGTGCCTTTTG--AACT--GAC-CGCAAGCCCTCCTGG-ACGATTGGAGCTGTA-ATGTGGAAAGGGCTCTGATGGAGCCGGTTAAAATGCTTCATTATCTGCAGAA---TACCACATACAGTAATACAATCTGGATGTT-TTTCCCCTCCTCCACTAAG-TAGCATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6312 191 + 190779 CTGTTCCAGGATACAGATCTCCTGATTCAG-TGTCCAGTGCCTTTTG--AACT--GAC-CGCAAGCCCTCCTGG-ACGATTGGAACTGTA-ATGTGGAAAGGGCTCTGATGGAGCCGGTTAAAATGCTTCATTATCTGCAGAA---TACCACATACAGTAATACGATCTGGATGTC-TTTCCCCTCCTCCGCTAAG-TAGCATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856080 192 - 880730 CTGTTCCAGGATACAGATCTCCTGATTCAG-TGTCCAGTGCCTTTTG--AGCT--GAC-CGCAAGCCCTCCTGG-ACGATTGGAACTGTA-ATGTGGAAAGGGCTCTGATGGAGCCAGTTAAAATGCTTCATTATTTGCAAAA---TACCACATACAGTAATACGATCTGGATGTCTTTTCCCCTCCTCCACTAAG-TAGCATA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 195973 188 + 180051392 CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttg--aact--gac-cacaAGCCCTCATGG-ACGACTGGAACTGTA-ATGTGGAAAGGGCTATGCTGGAGCCAGTTAAAATGCTTCATTACTTGCAAAA---TACCACATACAGTAATACGATATAGATGTC-TT--CCCTTCTCCACTAAG-TAG-ATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260422 188 - 181584905 CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttg--aact--gac-cacaAGCCCTCATGG-ACGACTGGAACTGTA-ATGTGGAAAGGGCTATGCTGGAGCCAGTTAAAATGCTTCATTACTTGCAAAA---TACCACATACAGTAATACGATATAGATGTC-TT--CCCTTCTCCACTAAG-TAG-ATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21254 188 - 100774 CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttg--aact--gac-cacaAGCCCTCATGG-ATGACTGGAACTGTA-ATGTGGAAAGGGCTATGCTGGAGCCAGTTAAAATGCTTCATTACTTGCAAAA---TACCACATACAGTAATACGATATAGATGTC-TT--CCCTTCTCCACTAAG-TAG-ATA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592738 190 - 91010382 CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttg--gact--gac-cgcaAGCTCTCATGG-ACGACTGGAACTGTA-ATGTGGAAAGGGCTATGATGGAGCCAGTTAAAATGCTTCATTATTTGCAAAA---TACCACATACAGTAATACGATATAGATGTC-TT-CCCCTTCTCCACTAAG-TAGCATA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30531 189 + 930449 CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttg--aact--gac-cacaAGCCCTCATAG-ACGACTGGAACTGTA-ATGTGGAAAGGGCTATGCTGGAGCCAGTCAAAATGCTTCATTATTTGCAAAA---TACCACATACAGTAATACGATATAGATGTC-TT-CCCCTTCTCCACTAAG-TAG-ATA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868751 190 + 1687011 CTGCTCCAGAATACGGATCTCCTGATTCAG-TGTCCAGTGCCTTTTG--AACT--GAC-CGCAGGCCCTCATGG-ACGACTGGAAATGTA-ATGTGGAAAGGGCTATGATGGAGCCAGTTAAAATGCTTCATTATTTGCAAAA---TACCACATACAGTAATACAATGTAGATGTC-TT-CCCCTTCTCCACTAAG-TAGCATA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142421 188 - 204313951 ATCTTCCAGAATACAGAT-CTCTGATGCA---GTCCATTGCCTCTTG--AACT--GAC-CGCAAACCCTCGTGG-ACAATCGGAACTGTA-ATGTGGAAAGGGCTGTGATGGAGCCAGTTAAAATGCTTCATTATTTGCAGAA---TACCACATACAGTAATACAATGTAGTTGTC-TTTCCCACTCTCTACTAAG-TAGCATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104628 189 - 16417988 CTCTTCCAGAATACAGATCCCCTGATACAG-CGTCCAGTGCCTTTTG--AACT--GAC-CGCAAACCCTCATGG-ACGATTGGAACTGTC-ATGTGGAAAGGGCTATGATGGAGCCAGTTAAAATGCTTCATTATTTGC--AA---TACCACATACAGTAATATAATGTAGATGTC-TTTCCCATTCTGTACGAAG-TAGCATA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 204822 189 + 306014 CTCTTCCAGAATACAGATCCCCTGATACAG-GATCCAGTGCCTTTTG--AACT--GAC-CGCAAACCCTCGTGG-ACGATTGGAACTGTA-ATGTGGAAAGGGCTATGATGCAGCCAGTTAAAATGCTTCATTATTTGC--AA---TACCACATACAGTAATACAATGCAGATGTC-TTTCCCATTCTCTATGAAG-TAGCATA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 67216 191 + 211231 CTCTTCCAGAATACAGATCTCCTGATACAG-TGTCCCGTGCCTTTTG--AACC--GAC-CGCAAACCCTCGTGG-ACGATCGGAACTGTA-ATGTGGAAAGGGCTATGATGGAGCCAGTTAAAATGCTTCATTGTTTGCAGAA---TGCCACGTACAGTAATACAGTCTAGATGCC-TTTCCCATTCTCTACTGAG-TAGCATA i aotNan1.NW_018494784v1 C 0 I 219 s otoGar3.GL873745 32972 171 + 2165740 TTATTCTAGAATGTCAAT---CTAATAAAC-TGTTCACTGCCTTTTT--CACT--GCC-CACAAGGCTTCAAAC-ATGTTTGGAGCTCCA-GTGAGAAAAGGGCAGTGAAG------------------CTTTATTTGCAAAA--CTGCCACATATAGTAAAACAATATCTATGTC-TTCCCCACTTTCCACTAAG-TAGCATA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076265 178 - 120421639 CTGTTCCAGAGGACAAGTCTCCCAGTATGC-TCTCTAGTTCATTTT-----CTTAAAA-CAAAAGTCTTGAAGG-ACATGCAGAGAGCCA-ATATGGGAAGGGTTAAGATGGAGCCAGTAAAAATGCTTCA-TATTTAGAAAA---CACAGCA------------ATATGGATTTC-TTTGCCATTCTTTACTGAGTTAACAGA i mm10.chr13 C 0 C 0 s canFam3.chr34 30165589 181 - 42124431 CTCTTCTAGAAAACGGATCTCCCACTACAC-TGTCCAGTGCTTTTCT--AAAT--GAAGCACAAAACCTTGCAGAACATGTGGTGCTCTA-GGGTGAAGAG------GATGGATCCCGTAAAAGTGCTTCATTGTTTGCAAAC---TACCACTTTC------GCAAAATGTAAATC-TTTCCCATTCTCCACTAAG-AATCATA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 540204 193 + 913073 CTATTCTAGAACATAAATCTCTTGTTTTAC-TGTCTGCTGGTTTTTTCCAGTG--GAC-CACAAAACCTAACTG-ATGTTTGGAGCTCCATGTATGAAAAGG---TTGGTAGATTCAGTAAAAGTGCTTCCTTGATTGCAAAGCTCTGCCACATATCATTATGCAATATATAC-TC-TTTCCCACTCTCCACTAAG-GAGCGAA i dasNov3.JH577625 I 7895 C 0 e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=30305.000000 s hg38.chr3_KI270779v1_alt 31927 8 + 205312 AGTGAAGA- s panTro5.chr3 200024365 8 + 202621043 AGTGAAGA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6503 8 + 190779 AGTGAAGA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856272 8 - 880730 AGTGAAGA- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196161 7 + 180051392 AA-TAAGA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260610 7 - 181584905 AA-TAAGA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21442 7 - 100774 AA-TAAGA- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592928 8 - 91010382 AATTAAGA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30720 8 + 930449 AATTAAGA- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868941 8 + 1687011 AATTAAGA- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142609 8 - 204313951 AATTAAGA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104817 8 - 16417988 AATTAAGA- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 205011 8 + 306014 AATTAAGA- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 33143 8 + 2165740 AACTAAGA- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076443 6 - 120421639 --ATAATA- i mm10.chr13 C 0 C 0 s canFam3.chr34 30165770 8 - 42124431 AATTCAGG- i canFam3.chr34 C 0 I 225 s dasNov3.JH577625 540397 5 + 913073 ----AAAAA i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 67407 219 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=26957.000000 s hg38.chr3_KI270779v1_alt 31935 3 + 205312 CTT s panTro5.chr3 200024373 3 + 202621043 CTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6511 3 + 190779 CTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856280 3 - 880730 CTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196168 3 + 180051392 CTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260617 3 - 181584905 CTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21449 3 - 100774 CTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592936 3 - 91010382 CTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30728 3 + 930449 CTT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868949 3 + 1687011 CTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142617 3 - 204313951 CTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 104825 3 - 16417988 CTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 205019 3 + 306014 CTT i cebCap1.NW_016108150v1 C 0 I 215 s otoGar3.GL873745 33151 3 + 2165740 CTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076449 3 - 120421639 TTC i mm10.chr13 C 0 C 0 s dasNov3.JH577625 540402 3 + 913073 ATT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30165778 225 - 42124431 I e aotNan1.NW_018494784v1 67407 219 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=86955.000000 s hg38.chr3_KI270779v1_alt 31938 18 + 205312 -----CCCAGAGGAAGTGCGTCT s panTro5.chr3 200024376 18 + 202621043 -----CCCAGAGGAAGTGCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6514 18 + 190779 -----CCCAGAGGAAGTGCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856283 18 - 880730 -----CCCAGAGGAAGTGTGCCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196171 18 + 180051392 -----TACAGAGGAAGTGTGCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260620 18 - 181584905 -----TACAGAGGAAGTGTGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21452 18 - 100774 -----TACAGAGGAAGTGTGCCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592939 18 - 91010382 -----TACAGAGGAAGTGTGCCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30731 18 + 930449 -----TACAGAGGAAGTGTGCCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868952 18 + 1687011 -----TACAGAGGAAGTGTGCCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142620 18 - 204313951 -----TACGGGGGAAATGTGCCT i calJac3.chr2 C 0 I 193 s saiBol1.JH378155 104828 17 - 16417988 -----TAC-AGAGAAATGTGCCT i saiBol1.JH378155 C 0 I 194 s otoGar3.GL873745 33154 16 + 2165740 -----TACAGAGAAAGTGTCT-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076452 11 - 120421639 -----TGCAAAGCAAG------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 540405 23 + 913073 ACAATTAAAGTGGAAGGGTGGCT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30165778 225 - 42124431 I e aotNan1.NW_018494784v1 67407 219 + 211231 I e cebCap1.NW_016108150v1 205022 215 + 306014 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=61228.000000 s hg38.chr3_KI270779v1_alt 31956 6 + 205312 TTTTCA s panTro5.chr3 200024394 6 + 202621043 TTTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6532 6 + 190779 TTTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856301 6 - 880730 TTTTCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196189 6 + 180051392 TTTTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260638 6 - 181584905 TTTTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21470 6 - 100774 TTTTCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592957 6 - 91010382 TTTTCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30749 6 + 930449 TTTTCA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868970 6 + 1687011 TTTTCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 142831 6 - 204313951 ttttca i calJac3.chr2 I 193 C 0 s saiBol1.JH378155 105039 6 - 16417988 ttttca i saiBol1.JH378155 I 194 C 0 s cebCap1.NW_016108150v1 205237 6 + 306014 ttttCA i cebCap1.NW_016108150v1 I 215 C 0 s aotNan1.NW_018494784v1 67626 6 + 211231 ttttca i aotNan1.NW_018494784v1 I 219 C 0 s otoGar3.GL873745 33170 6 + 2165740 TTTCCA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 540428 6 + 913073 TTTCTA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46076463 0 - 120421639 C e canFam3.chr34 30165778 225 - 42124431 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=885893.000000 s hg38.chr3_KI270779v1_alt 31962 114 + 205312 -TCTCGTATCTGAGTCAGT-------------------GAGTATCC-TTTTTGGAAACAAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGG---GGCTCAGTCCTT---CCTTGCCCCT s panTro5.chr3 200024400 114 + 202621043 -TCTCGTATCTGAGTCAGT-------------------GAGTATCC-TTTTTGGAAACAAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGG---GGCTCAGTCCTT---CCTTGCCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6538 115 + 190779 -TCTCGTATCTGAGTCAGT-------------------GAGTATCCTTTTTTGGAAACAAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGG---GGCTCAGTCCTT---CCTTGCCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856307 113 - 880730 -TCTCGTATCTGAGTCAGT-------------------GAGTATCC-TTTTTGGAAA-AAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGG---GGCTCAGTCCTT---CCTTGCCCCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196195 113 + 180051392 -TGTGGCATCTGAGTCCGT-------------------GAGTGTCC-TGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTAGAGTGCTGAGTCGGGGCGGAAAGGAGGACC-GGG---GGCTCCGTCCTT---CCTCGCCCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260644 113 - 181584905 -TGTGGCATCTGAGTCCGT-------------------GAGTGTCC-TGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTAGAGTGCTGAGTCGGGGCGGAAAGGAGGACC-GGG---GGCTCCGTCCTT---CCTCGCCCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21476 113 - 100774 -TGTGGCATCTGAGTCCGT-------------------GAGTGTCC-TGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTGGAGTGCCGAGTCGGGGCGGAAAGGAGGACC-GGG---GGCTCCGTCCTT---CCTCGCCCCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89592963 113 - 91010382 -TGTGGTATCTGAGTCAGT-------------------GAGTATCC-TGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTAGAGTGCCGAGTTGGGGTGGAAAGGAGGACT-GGG---GGCTCAGTCCTT---CCTCGCCCCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30755 113 + 930449 -TGTGGTATCTGAGTCAGT-------------------GAGTGTCC-TGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTGGAGTGTCGAGTCGGGGCGGAAAGGAGGACC-GGG---GCCTCCGTCCTT---CCTCGCCCCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 868976 113 + 1687011 -TGTCGTATCTGAGTCAGT-------------------GAGTATCC-TGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTGGAGTGCCGAGTCGGGGTGGAAAGGACGACC-GGG---GGCTCAGTCCTT---CCTCGCCCCT i colAng1.NW_012116910v1 C 0 M 860 s calJac3.chr2 142837 113 - 204313951 -TTTTGTATCTGAGTCAGT-------------------GAGTATCC-TGTTTGGAAACACGCTTCGTCCTGA-------TTTTCTAGAGTGCTAAGTCA-GGTGGAAAGGAGGAACTGGG---GACTCAGTCCTT---CCTTGCCCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 105045 113 - 16417988 -TTTTGTGTCTGAGTCAGT-------------------GAGTATCC-TGTTCGGAAACACGCTTTGTCCTGA-------TTTTCTAGAGTGCCTAGTCA-GGTGGAAAGGAGGGCCTGGG---GACCCAGTCCTT---CCTCGCCGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 205243 113 + 306014 -TTTTGTATCTGAGTCAGT-------------------GAGTATCC-TGTTTGGAAACACGCTTTGTCCTGA-------TTTTCTAGAGTGCCAAGTCA-GGTGGAAAGGAGGACCTGGG---GACTCAGTCCTT---CCTTGCTGCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 67632 113 + 211231 -TTTTGTATCTGAGTCAGT-------------------GAGTTTCC-TGTTTGGAAACAAGCTTCGTCCTGA-------TTTTCTAGAGTGCCAAGTCA-GCTGGAAAGGGGGACCTGGG---GCCTCAGCCCTT---CCTTGCCCCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 33176 96 + 2165740 -TTTTATACCTGAGTCAGT-------------------GAGGATCC-TGTTTGG----------------GC-------TTTTCTTGGAGCCCAAGTCAGAGTGGAGATGTGCTCC-TAG---GGCTCGGTCCAT---GCTGTTTGT- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46076463 100 - 120421639 ------------GGTCAGT--------------------AGTACCC-TATTGGGAAACAGGCT--GTTTTGGAAAAGGCTTTCCTAGAATGCCAAGTTA--GTAGAGAGGAC-----AAG---ACCTAAGTCTTT---GCCTCTTTCT i mm10.chr13 C 0 C 0 s canFam3.chr34 30166003 88 - 42124431 -TCTCCTGTCTGAGTCTAT-------------------GAGTGTCC-TGTTTGGAAACAGGCTTCATCCTGA-AGGGATTTTCCTGGGGTGCCAAGTCT---------------------------TTAGCCCTT---CC-------- i canFam3.chr34 I 225 C 0 s dasNov3.JH577625 540434 143 + 913073 TTTTAATATCTGAATCAGAAGTTTAAGGTGATTTCAGAGAATGTCC-TCTTTGGAAACAAATTTAGTCTGGG--GCAGCTTTTCTTG-GTGTCAAGTCT-GGTGGGGAAGGGGCCTCAGGTGTGGCTAAGTTCTTGCCCCTTGCCCCT i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=3649893.000000 s hg38.chr3_KI270779v1_alt 32076 513 + 205312 TGGGCTGCCCTTCAGGGTTA----AATA------GAGGGTCCCAG--CTGAGCTCTCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGTGAACAGTTTTCAAGGGGAAGTTTGAATTACTATCCCCCACAGCATTTGTT----CCTTCAGGACAC-TAACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACGAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTATACCAGT----------------------TTGTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGGGAAAAATTTCTCAT---AGGTATCCAATGCATGCTGAAATTATTTTCAGTGTAATAATACTTAATTGCAAGTACCAATATAAACATAGATGTTAACA-TTTTTACTTGTATCTGTT-ATGTATCTATAAATTAGA-TTTAAATTT-AGGTCAA---GTAAAGCAA s panTro5.chr3 200024514 509 + 202621043 TGGGCTGCCCTTCAGGGTTA----AGTA------GAGGGTCCCAG--CTGAGCTCTCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGTGAACAGTTTGCAAGGGGAAGTTTGAATTACTATCCCCCACAGCATCTGTT----CCTTCAGGACAC-TAACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACGAGAGGGCATCTGCTGAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------T-G----------GC------------------------------TTG---GGG---TAAAGATCTATAC-AGT----------------------TTGTTTT-------------------------CATA----T--GAGATCATAGACA---------T-----A-------AGGGAAA--TTTCTCAT---AGGTATCCAATGCATGCTGAAATTATTTTCAGTGTAATAATACTTAATTGCAAGTACAAATATAAACATAGATGTTAACA-TTTTTACTTGTATCTGTT-ATGTATCTATAAATTAGA-TTTAAATTT-AGGTCAA---GTAAAGCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 6653 512 + 190779 TGGGCTGCCCTTCAGGGTTA----AGTA------GAGGGTCCCAG--CTGAGCTCTCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGTGAACAGTTTGCAAGGGGAAGTTTGAATTACTAtcccccacagcatctgtt----ccttgaggacac-taaccctctggatctgtgtcttctgtgtctccagtggccaacagtgttgcaaacaggaacccgaggtgttcacttcactgttga-aggaacgaGAGGGCATCTGCTGAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG---TAAGGATCTATACCAGT----------------------TTGTTTT-------------------------CATA----T--GAG-TCATAGACA---------t-----a-------agggaaaaatttctcat---aggtatccaatgcatgctgaaattattttcagtgtaataatacttaatcgcaagtacaaatataaacatagatgttaaca-tttttacttgtatctgtt-atgtatctataaaTTAGA-TTTAAATTT-AGGTCAA---GTAAAGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856420 513 - 880730 TGGGCTGCCCTTCAGGGTTA----AGTA------GAGGGTCCCAG--CTGAGCTCTCTGGATGCAC-AGGAGCACCTGGGTACAGAAGAAGGTGAACAGTTTGCAAGGGGAAATTTGAATTACTATCCCCCACAGCATTTGTT----CCTTCAGGGCAC-TAACCCTCTGGATTTGTGTCTTCTCTGTTTCCAGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGA-AGGAACAAGAGGGCATCTGCAGAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTATACCAGT----------------------TTGTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGGGAAAAATTTCTCAT---AGGTATCCAATTCATGCTGAAATTATTTTCAGTGTAATAATACTTAATTGCAAGTAAAAACATAAACATAGATGTTAACA-TTTTTACTTGTATCTCTT-ATGTATCTATAAACTAGA-TTTAAATTT-AGGTCAA---GTAAAGCAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196308 515 + 180051392 TGGGCTGCCCTTCAGGGTTA----AGTG------GAGAGTCCCAG--CTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACCTAAGAAGGGGAACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTT----CCTTCAGGACAC-TAACCCTCTGCATCTGTGTCTTCTGTGTCACCAGTGGCCAGCAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCATTATTAAATGA-TTTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAGAAAAATTTCTC-----AGGTGTCCAACACATGCTGAAATTATTTTCAGTGTTATAATAATCAATTGCAAGTACAAACACAAACATAGATGTTAGCA-TTTTTACTTATATCTCTTAATGTATCTATAAACTAGA-TCTAAATTT-AGATCAA---GTAAAGCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180260757 514 - 181584905 TGGGCTGCCCTTCAGGGTTA----AGTG------GAGAGTCCCAG--CTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACCTAAGAAGGGGAACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTT----CCTTCAGGACAC-TAACCCTCTGCATCTGCGTCTTCTGTGTCACCAGTGGCCAGCAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA-TTTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAGAAAAATTTCTC-----AGGTGTCCAACACATGCTGAAATTATTTTCAGTGTTATAATAATCAATTGCAAGTACAAACACAAACATAGATGTTAGCA-TTTTTACTTATATCTCTTAATGTATCTATAAACTAGA-TCTAAATTT-AGATCAA---GTAAAGCAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 21589 486 - 100774 TGGGCTGCCCTTCAGGGTTA----AGTG------GAGAGTCCCAG--CTGAGCTCCCTGGATGC-------------------------------ACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTT----CCTTCAGGACAC-TAACCCTCTGCATCTGCGTCTTCTGTGTCACCAGTGGCCAGCAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TATTAAATGA-TTTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAGAAAAATTTCTCAT---AGGTGTCCAATGCATGCTGAAATTATTTTCAGTGTAGTAATACTTAATTGCAAGTACAAACACAAACATAGATGTTAGCA-TTTTTACTTATATCTCTTAATGTATCTATAAACTAGA-TCTAAATTT-AGATCAA---GTAAAGCAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593076 514 - 91010382 TGGGCTGCCCTTCAGGGTTA----AGTA------GAGAGTCTCAG--CTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGGGAACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTT----CCTTCAGGACAC-TAACCCTCTGCATCTGTGTCTTCTGTGTCACCAGTGGCCAACAGTGTTGCAAACAGGAACCTGAGGTTTTCACTTCACTATTGATGGGAACAAGAGGGCATCTGATAAAGTTTCAGATTCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAGAAAAATTCCTCAT---AGGTATCCAACGCATGCTGAAATTATTTTCAGTGTTATAATAATCAATTGCAAGTACAAACACAAACATAGATGTTAACA-TTTTTACTTATATCTCTT-ATGTGTCTATAAACTAGA-TTTAAATTT-AGATCAA---GTAAAGCAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 30868 512 + 930449 TGGGCTGCCCTTCAGGGTTA----AGAA------GAGAGTCCCAG--CTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACCTAAGAAGGGGAACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTT----CCTTCAGGACAC-TAACCCTCTGCATCTGTGTCTT-TGTGTCACCAGTGGCCAGCAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCTGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA---TTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAGAAAAATTTCTCAT---AGGTGTCCAATGCATGCTGAAATTATTTTCAGTGTAGTAATACTTAATTGCAAGTACAAACACAAACATAGATGTTAGCA-TTTTT-CTTATATCTCTTAATGTATCTATAAACTAGA-TTTAAATTT-AGATCAA---GTAAAGCAA i manLeu1.NW_012107609v1 C 0 C 0 s calJac3.chr2 142950 501 - 204313951 TGGGCTGCCCTTCAGGGTTA----AGTA------GAGGGTTCCAG--CTGAACTCTCTGGATGCAC-AGGAGCCCCTGGGTACATAAAAAGGTGACCAGTTTGCAAGGCAGAATTTGAATTAT--ATCCCCCCAGCATTTGTT----CCTTCAGGACAC-TGACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAGCAGTGTCACCAACGGGAACCCGAGGTTTTCACTTCACTGTGGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGAATCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG---GGG--GGAGGGATCTATACCAGT----------------------TTGTTTC-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAG---GAATTCTCA----AGGCATCCAGTGCATGCTCAAATGATTTTCAGTGTAAT-------AATTGCAGGTACAAGCATAAACATAGGTGCTAACA-TTTGTACTTATATCTTGT-ATGTATCTGTAAACTAGA-TTTCCATTT-AGATCAA---GTAAAGCAA i calJac3.chr2 C 0 I 5 s saiBol1.JH378155 105158 503 - 16417988 TGGGCCGCCCTTC-GGGTTA----AGTC------GAGAGTCCCGG--CGGAGCCCTCTGGATGCAC-GGGAGCACCTGGGTACATACAGAGGTGAACAGTTCGCAAGGCAGAATTCGAATTCT--GTCCCCACAGCATTTGTT----CCTTCAGGACAC-TAACGCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAGTGGTGTCACCAGCAGGGACCCGAGGCTTTCACTTCGCTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTCTCAGAATCCGTGAGTTCGT--GCTTTTTGTTCCA-TTATAAGTGA-TTTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTA---CGG--GGAGG--TCGATAGCAGT----------------------TTGTTTC-------------------------CATA----T--GAG-TCATAGACA---------t-----a-------agagaaaaaattctcgt---aggcaccctgtgcatgctcaaatgattttcagtgtaat-------aattgcaagtacaaacataagcataggtgttaaca-tttgtacttacatcttgt-atgtatctgtaagctaga-tttcaattt-agatcaa---gtaaagcaa i saiBol1.JH378155 C 0 I 5 s cebCap1.NW_016108150v1 205356 503 + 306014 TGGGCTGCCCTTCAGGGTTA----AGTA------GAGGGTCGCAG--CTGAGCCCTCTGGATGCAC-GGGAGCACCTGGGTACATAAAAAGATGAACAGTTTGCAAGGCAGAATTTGAATTCT--GTCCCCAGAGCATTTGTT----CCTTCAGGACAC-TAACCCTCTGGATTTGTGTCTTCTGTGTCTCCAGTGGCCAGCAGTGTCACCAACAGGAGCCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGAATCCGTAAGTTCAT--GCTTTTTGTTCCA-TTATAAATGA--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTA---CAG--GGAGGAATCTATACCAGT----------------------TTGTTTC-------------------------CATA----T--GAG-TCATAGACA---------T-----A-------AGAGAAAAAATTCTCAT---AGGCATC--GTGCATGCTCAAATGATTTTCAGTGTAAT-------AATTCCAAGTACAAACATAAACATAGGTGTTAACA-TTTGTACTTATATCTTGT-ATGTACCTATAAACTAGA-TTTCAATTT-AGATCAA---GTAAAGCAA i cebCap1.NW_016108150v1 C 0 I 5 s aotNan1.NW_018494784v1 67745 502 + 211231 TGGGCTG-CCTTCAGGGTTA----AGTC------GAGGGTCCCAG--CTGAGCTCTCTGGATGCAC-AGGAGCCCCTGGGTACATAAAAAGGTGAACAGTTTGCAAGGCACAATTTGAATTAT--ATCCCCACAGCATTTGTT----CCTTCAGGACAC-TAACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAGCAGTGTCAACAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGAATCCGTAAGTTCGT--GCTTTTTGTTCCA-TTATAAATGG--TTTTT------------------------------------------------------------------------TTG----------GC------------------------------TTG----GG--GGAGGGATCTATACCAGT----------------------TTGTTTC-------------------------CATA----T--GAC-TCATAGACA---------T-----A-------AGAGAAGAAATTCTCAT---GGGCATCCCGTGCATGCTCAAATGA-TTTCAGTGTAAT-------AATTGCAAGTACAAACATAAACATAGGTGTTAACG-TTTGTACTTGTATCTTGT-ATGTGTCTATAAACTAGA-TTTCAATTT-AGATCAA---GTAAAGCAA i aotNan1.NW_018494784v1 C 0 I 5 s otoGar3.GL873745 33272 517 + 2165740 --TGCTGCCCTGCAGAGCGAGCAGAGCA------AAGTGTCCCAG---GGAGTGTTCTGGATGAGC-AGGAGCAGCTGGGCCCCTGAAAAG-TTAACAGTTTACAGGGAGAAGTACAATT-----CCTCCCATGGAGTGTGCTGCTGCTTTAAAGATGC-TAACCCTCAG--TCTGTGTT-------TCAGCAGTGGCCAGCAGCATTCCAGACAGGAACCAGAGGTTTTCACTTCACTGGTGATGGGTACAAGAGAGCATCTGCTAAAGTGTCAGATTCTGTAAGTTTGTGAGTTTTTTGTTCCA-TTATAATTGGGGTTTTT------------------------------------------------------------------------TTGGTGGTTGTTTGC------------------------------TTA---GAGCAGTAATGATCTATACCAGT----------------------TTATTTT-------------------------AATACGTtt--gag-taataagcc---------tatttaa-------agagaaaagattctcat---gagcatctagtataagctcagattatttttagtgcaataatacttaattgt-ggtagaaatataaacataaatattaacc-tttttgcttatagctttt-acgtatctataaactaga-------------gttaa---gtaaagcat i otoGar3.GL873745 C 0 I 8 s mm10.chr13 46076563 611 - 120421639 -----------------------TAGTC-------AGGGTCCCAG--GTAAACTTTCTACAAGAAT-GAAAACAACTTGATATATAGGAAAGTTAACAATTTAGAAGGAAAATTCTAATTCAT----TCCTTCTGTTTCTGTT-----CTTCAAGAC-C-TAACACTGT-----------TTATTTCCCTGCAGTGGCCAGGAACACTCCAAAAACAGACCTGCGGCTTTCACTTCTCTGTTGGTGAGAACAAGAAGGCATCAGCTAAAGTTTCAGATGCAGTAAGTTTAA--------TGCTCAA-TTATAAACAA--TTTTTGTttttgttttattcaagtcaatgtctcgctatgtagctctggctggcctgggatttgttatgtagatcaggctg----------gcctcaaactcacagaaatccatctaactctgttg---gga--ttaaaggtgtgcaccattaagcccagctTGCAAACGTTTCTTGTTTTGAAGGATTATGATCTAATTTTAATATATT----T--GAA-TATTGGACA---------TATTT-A-------AAGGAAAGattttttttaaaaaatattaattGTATGCTCAAAT-GTGTGTAGTGTAAT-------ACTTACAA----AAATACTAACATAAATACTGACA-TTTTTGCTGGCAAATCTT----TATC--TAAACTAAACTCTAAATTC-AAGTAAA---GTAACAAAA i mm10.chr13 C 0 C 0 s canFam3.chr34 30166091 502 - 42124431 ----CTAGCCTTCAGGGTTA----AGTACCTCTACTTAACCCCAG--CTGAGCTTTCTAGGTGAACGGGGAGCACCTGGGTACTTGAAGAGGTTGACAACTT--AAGGGGAAATTTTGGTCACTAGTCCCC----------------TGTTTAAGACACTTAGTGCTCTCCATCTGTGTC-------TCAGCAGTGGCCGGCGGCATGGCAGACAGGCACCCGCAGTTTTCACTTCACCATTGATGGGAATAAGAGGTCCTCTGCTAAAGTTTCAGATTCAGTAAGTTCAC-AATTTTTTGTTCCC-TTATAAGTGA--TATCA------------------------------------------------------------------------TTG----------GC------------------------------TTA---GAGGTGTAACGATCTATACCAGT----------------------TT-TCAG-------------------------TATa----ttggaa-taacacacagttcttattt-----a-------aaggaaaaaattctcat--------tccaatg-atgctcaaattatttttagcat-atagtacttaatt----gtacaaatataagcatagttgttaacactttttgcttgcagtttgt-aggtatcta-aaaccaga-gtaaacttt-caatcaaagcacaaaataa i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 540577 472 + 913073 -------------------------------------GCCCTCATTCCTGAGC---CCGTGTGAAT-CGGAGCCCCTGGGTG--TGCGGAGGGGCTCCGCCCCCCAG---CAGCTCGTGTTAT------TTATTATTTCTGTT----CCTTCAAGATGTTTAATGCTCTACATTTGTGTT-------TCAGCAGTCGCCGGCAACTTTCCAAACTGGAACACGTGGTTTTCACATCAATGTTGATGGAAATAAAAGGTCATCTGCTAAAATTTCAGATTCAGTGAGTTCGT--AGCTTTT-TTCCA-CTATAATTTG--TTTTC------------------------------------------------------------------------CTG----------AG------------------------------TTTATCGGG--GTAATGACCTATACCAAT----------------------TTCTAAT------------------------ATatt----c--aag-taatacaca---------t-----atctctttaaggaaagaattctctt---ggacatcatgtgcatgcacaaattatttttaggatcat---acttaagt-cttgtacaaacataaatacagacatt-----tttttgcttatagctcta-atgtatctataaaccaga-tttaaatgtaaaatcaa---gtgaagcaa i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 869089 860 + 1687011 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=339835.000000 s hg38.chr3_KI270779v1_alt 32589 42 + 205312 TAAATTA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAA-T s panTro5.chr3 200025023 42 + 202621043 TAAATTA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAA-T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7165 42 + 190779 TAAATTA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAA-T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856933 42 - 880730 TAAATTA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATGAAA-T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196823 43 + 180051392 TAAATTA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261271 43 - 181584905 TAAATTA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22075 43 - 100774 TAAAATA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAATT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593590 43 - 91010382 TAAAATA-A---------A--------ATGAACAGTAT--CTGCTGTGTTAGATGATAAAATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31380 43 + 930449 TAAAATA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAATT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 869949 43 + 1687011 TAAAATA-A---------A--------ATGAACAGTAT--CTGCTGTGATAGATGATAAAATT i colAng1.NW_012116910v1 M 860 C 0 s calJac3.chr2 143456 42 - 204313951 TAAAGTA-A---------A--------ATGAACAGTGT--CTGCTGTGACAGATGATAAGAT- i calJac3.chr2 I 5 I 1 s saiBol1.JH378155 105666 42 - 16417988 taaaata-a---------a--------atgaacaGTGT--CTGCTGTGATAGATGATAAAAT- i saiBol1.JH378155 I 5 I 1 s cebCap1.NW_016108150v1 205864 42 + 306014 TAAAATA-A---------A--------ATGAACGGTGT--CTGCTGTGATAGATGATAAAAT- i cebCap1.NW_016108150v1 I 5 I 1 s aotNan1.NW_018494784v1 68252 41 + 211231 TAAAATA-A---------A--------ATGAAT-GTAC--CTGCTGCGATGGATGATAAAAT- i aotNan1.NW_018494784v1 I 5 I 31 s otoGar3.GL873745 33797 43 + 2165740 taaaataca---------a--------atgaaTAGCAT--TTGCTGTGGCAGATGGTAAAAT- i otoGar3.GL873745 I 8 C 0 s mm10.chr13 46077174 47 - 120421639 TAAGAAA-A-----TATTA--------ATGAGCTGTAT--ATGCTGTGATGAACTGTGGAATT i mm10.chr13 C 0 C 0 s canFam3.chr34 30166593 46 - 42124431 tagaatg-a---------aaatgacagatgaacattat--ttactgtgacgagtgaCA----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 541049 48 + 913073 caaaata-accaaGTGCCA--------GTGAGGAGTATTACTACAGTG-----TGATAAAAT- i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=163210.000000 s hg38.chr3_KI270779v1_alt 32631 31 + 205312 -CCTACTGAAAAGAGGACCGTGGGGCCCTTCC s panTro5.chr3 200025065 31 + 202621043 -CCTACCGAAAAGAGGACCGTGGGGCCCTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7207 31 + 190779 -CCTACCGAAAAGAGGACCGTGGGGCCCTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 856975 31 - 880730 -CGTACTGAAAAGAGGACTGTGGGGCCCTTCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196866 31 + 180051392 -CCTACTGAAATTAGGACTGTGGGGCCACTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261314 31 - 181584905 -CCTACTGAAATGAGGACTGTGGGGCCACTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22118 30 - 100774 -CCTACTGAAATGAGGACTGT-GGGCCACTCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593633 31 - 91010382 -CCTACTGAAATTAGGACTGTGGGGCCACTCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31423 31 + 930449 -CCTACTGAAATTAGGACTGTGGGGCCACTCA i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 869992 31 + 1687011 -CCTACTGAAATTAGGACCGTGGGCCCACTCG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143499 31 - 204313951 -CCCACTGCAGATAGGACGGTGTGGCCATGTG i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 105709 31 - 16417988 -CCTACTGCATATAGGACTGTGTGGCCCCTTG i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 205907 31 + 306014 -CCTACTGCAAATAGGACTGTGTGGCCACTTG i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 33840 18 + 2165740 --CTACTCCAAATAGGACTG------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077221 29 - 120421639 -CCTGCACAAAATAAGACTAT--GGCCACTGG i mm10.chr13 C 0 C 0 s canFam3.chr34 30166639 20 - 42124431 ------------TAGAACTGTGAAGCCACTCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 541097 32 + 913073 CTCTACCTTGAAGAGGGCTGTGCAGCCTTCCA i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 68293 31 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=518152.000000 s hg38.chr3_KI270779v1_alt 32662 78 + 205312 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTGAGTGTGCCTGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAACGTG---CTGA---GAAGTTCTTTTCTC-------- s panTro5.chr3 200025096 78 + 202621043 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTGAGTGTGCCTGTT-------CT-CTCTCTGTTAGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7238 78 + 190779 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTGAGTGTGCCTGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857006 78 - 880730 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTGAGTGTGCCTGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196897 76 + 180051392 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTTGGCGTGCCTGT---------T-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261345 76 - 181584905 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTTGGCGTGCCTGT---------T-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22148 76 - 100774 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTTGGCGTGCCTGT---------T-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GACGTTCTTTTCTC-------- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593664 78 - 91010382 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTTAGTGTACCTGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31454 76 + 930449 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTTGGCGTGCCTGT---------T-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870023 78 + 1687011 ------------------GGTGTGGGTTCCTTG-----------------------------------------GTATTCAGTGTGCCTGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAACTTG---CTGA---GAAGTTCTTTTCTC-------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143530 75 - 204313951 ------------------GGTAT---TTCTTTG-----------------------------------------GTATTCGGTGTGCGTGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAGCTTG---CTGA---GAAGTTCTTTTCTC-------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 105740 74 - 16417988 ------------------GTTGTGGGTTCTTTG-----------------------------------------GTATTTGGTGTGCGTGT------------TCTCTGTTGGAA-A-ACT--GAAGCTTG---CTGA---GAAGTTCTTTTCCC-------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 205938 78 + 306014 ------------------GTTGTGGGCTCTTTG-----------------------------------------GTATTTAGTGTACATATT-------CT-CTCTCTGTTGGAA-A-ACT--GAAGCTTG---CTGA---AAAGTTCTTTTCTC-------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 68324 78 + 211231 ------------------GGTGTGGGTTCTTTG-----------------------------------------GTATTTGGTGTGCATGTT-------CT-CTCTCTGTTGGAA-A-ACT--GAAGCTTG---CTGG---GAAGTTCTTTTCTC-------- i aotNan1.NW_018494784v1 I 31 I 436 s otoGar3.GL873745 33858 61 + 2165740 ------------------GATATAGATTATT-------------------------------------------GTATTTAGTGTACCAGTT-------CT--ACTTTGTTGAAACA-AAT--GAACTTTG---TTC-------------------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077250 77 - 120421639 ------------------AGTTGAGACTCCTCT-----------------------------------------GTATTTAGC---CTCTTT-------TG-CTTTCTGTTTAAA-A-AATACGAACATTA---CTCA---CAAGTTTTTATCAT-------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30166659 79 - 42124431 ------------------AGTGTAGGCTCTCT------------------------------------------GTGTTTACCGGTCCCATC-------TTATTCTCTGCTGAAG-ACACT--AAAATGTG---TTCA---CAGGTTGTTTTCTC-------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 541129 158 + 913073 AGCAGCTCTTCATGAGGTCCTGTGGGCTTCCTGTGGCATTACCGTATCACAGGCTCTCTTTTCCCAAACCCACAGCAGTTACTGTAACTACTGCCCTGCAC-CTCCTTGCTTGTG-A-ACA--CAGGCATGGGCCTGAACTAGAGCTGTACTCCTCAGTGTTC i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=217780.000000 s hg38.chr3_KI270779v1_alt 32740 34 + 205312 ATAAGCTCACAATAGCGACTGAATGCTCCTTGGT s panTro5.chr3 200025174 34 + 202621043 ATAAGCTCACAACAGCGACTGAATGCTCCTTGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7316 34 + 190779 ATAAGCTCACAATAGCGACTGAATGCTCCTTGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857084 34 - 880730 ATAAGCTCACAATAGCGACTGAATGCTCCTTGGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 196973 34 + 180051392 GTAAGCTCACGATAGCGACTGAATATTCCTTGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261421 34 - 181584905 GTAAGCTCACGATAGCGACTGAATGCTCCTTGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22224 34 - 100774 GTAAGCTCACGATAGCGACTGAATACTCCTTGGC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593742 34 - 91010382 GTAAGCTCACAATAGCGACTGAATACTCCTTGGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31530 33 + 930449 GT-AGCTCACAATAGCGACTGAATGCTCCTTGGC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870101 34 + 1687011 ATAAGCTCACAATAGCGACTGAATACTCCTTGGC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143605 34 - 204313951 TTCTGCTCCTGATAGCAACTGAATACTCCATGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 105814 34 - 16417988 TTCTGCTCACGATAGCGACTGAATACTCCGTGGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206016 34 + 306014 TTCTGCCCATGATAGCGACTGAATACTCCATGGC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 33919 27 + 2165740 ------ACAAGGTAA-GTTTTAATACTACTTAGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077327 33 - 120421639 ATGAACTAGTAA-GGTTATAGAATATTGCTTGAC i mm10.chr13 C 0 C 0 s canFam3.chr34 30166738 33 - 42124431 ATAAGCTCACAGTAGTTACTGAATGCTG-GTGGT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 541287 34 + 913073 AGGTGGTCACCAGACAAACTGGATATGCCTAGGT i dasNov3.JH577625 C 0 I 190 e aotNan1.NW_018494784v1 68402 436 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=215849.000000 s hg38.chr3_KI270779v1_alt 32774 32 + 205312 ACCTTCTCAGGCATAA--------GCATAGGC-------------ACGGCCCT s panTro5.chr3 200025208 32 + 202621043 ACCTTCTCAGGCATAA--------GCATAGGC-------------ACGGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7350 32 + 190779 ACCTTCTCAGGCATAA--------GCATAGGC-------------ACGGCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857118 32 - 880730 TCCTTCTCAGGCATAA--------GCATAGGC-------------ACGGCCCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197007 32 + 180051392 ACCTTCTCAGGCATAA--------GCAGAGGC-------------GCGGCCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261455 32 - 181584905 AGCTTCTCAGGCATAA--------GCAGAGGC-------------GCGGCCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22258 32 - 100774 ACCTTCTCAGGCATAA--------GCAGAGGC-------------GTGGCCCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593776 32 - 91010382 ACCTTCTCAGGCATAA--------GCATAGGC-------------ATGGCCCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31563 32 + 930449 ACCTTCTCAGGCATAA--------GCACAGGC-------------GCGGCCCT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870135 32 + 1687011 ACCTTCTCAGCCATAA--------GCATAGGC-------------CTGGCCCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143639 32 - 204313951 ACCTTCTCAGCTATGA--------GCATAGGC-------------ACGGCCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 105848 32 - 16417988 ACCTTCTCAGCTGTGA--------GCATAGAC-------------ATGGCCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206050 32 + 306014 ACCTTCTCAGCTATGA--------GGATAGAC-------------ATGGCCCT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 33946 30 + 2165740 ACCTTTTCAGTCATAA----------AAAGAC-------------ATGGGCCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077360 53 - 120421639 AATTTCTCAGCAATAAATCTTCGCACACAGACCTTCTCCTTAAATATAAACTT i mm10.chr13 C 0 C 0 s canFam3.chr34 30166771 32 - 42124431 ACCTTCTCAGTCAAAC--------TCAGGGTT-------------CCATTCCT i canFam3.chr34 C 0 I 246 e dasNov3.JH577625 541321 190 + 913073 I e aotNan1.NW_018494784v1 68402 436 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=44415.000000 s hg38.chr3_KI270779v1_alt 32806 5 + 205312 GAAGT s panTro5.chr3 200025240 5 + 202621043 GAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7382 5 + 190779 GAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857150 5 - 880730 GAAGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197039 5 + 180051392 GAAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261487 5 - 181584905 GAAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22290 5 - 100774 GAAGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593808 5 - 91010382 GAAGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31595 5 + 930449 GAAGT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870167 5 + 1687011 GAAGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143671 5 - 204313951 GAGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 105880 5 - 16417988 GAAGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206082 5 + 306014 GAAGT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 33976 5 + 2165740 GAAGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077413 5 - 120421639 GAAAT i mm10.chr13 C 0 C 0 e dasNov3.JH577625 541321 190 + 913073 I e canFam3.chr34 30166803 246 - 42124431 I e aotNan1.NW_018494784v1 68402 436 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=95596.000000 s hg38.chr3_KI270779v1_alt 32811 12 + 205312 AGAGTTGTGGTC s panTro5.chr3 200025245 12 + 202621043 AGAGGTGTGGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7387 12 + 190779 AGAGGTGTGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857155 12 - 880730 AGAGTTGTGGTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197044 12 + 180051392 AGAGTTGTGGTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261492 12 - 181584905 AGAGTTGTGGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22295 12 - 100774 AGAGTTGTGGTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593813 12 - 91010382 AGAGTTGTGGTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31600 12 + 930449 AGAGTTGTGGCC i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870172 12 + 1687011 AGAGTTGTGGTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143676 12 - 204313951 AGAGCTGGGGTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 105885 12 - 16417988 AGAGCCGGGGTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206087 12 + 306014 AGAGCTGGGGTC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 33981 11 + 2165740 ATAG-TGTGGTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077418 12 - 120421639 ATAGTTGTGGTC i mm10.chr13 C 0 I 504 s dasNov3.JH577625 541511 12 + 913073 AGAATTGGGGTC i dasNov3.JH577625 I 190 C 0 e canFam3.chr34 30166803 246 - 42124431 I e aotNan1.NW_018494784v1 68402 436 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=12660.000000 s hg38.chr3_KI270779v1_alt 32823 6 + 205312 -------------------------------------------CTCAGT----------------------------- s panTro5.chr3 200025257 6 + 202621043 -------------------------------------------CTCAGT----------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7399 6 + 190779 -------------------------------------------CTCAGT----------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857167 6 - 880730 -------------------------------------------CTCAGT----------------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197056 6 + 180051392 -------------------------------------------CTCAGT----------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261504 6 - 181584905 -------------------------------------------CTCAGT----------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22307 6 - 100774 -------------------------------------------CTCAGT----------------------------- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593825 6 - 91010382 -------------------------------------------CTCAGT----------------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31612 6 + 930449 -------------------------------------------CTCAGT----------------------------- i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870184 6 + 1687011 -------------------------------------------CCCAGT----------------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 143688 6 - 204313951 -------------------------------------------CTCAGT----------------------------- i calJac3.chr2 C 0 I 362 s saiBol1.JH378155 105897 6 - 16417988 -------------------------------------------CTCAGT----------------------------- i saiBol1.JH378155 C 0 I 368 s cebCap1.NW_016108150v1 206099 6 + 306014 -------------------------------------------CTCAGT----------------------------- i cebCap1.NW_016108150v1 C 0 I 368 s otoGar3.GL873745 33992 6 + 2165740 -------------------------------------------TTTAAT----------------------------- i otoGar3.GL873745 C 0 I 488 s dasNov3.JH577625 541523 78 + 913073 TTAATGGTTTAGCTTTTACAAACATTTTTTTGAGGGTGTACCTTTAAGTTTTCAACATTTCAACTGATGGTAGATTTC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46077430 504 - 120421639 I e canFam3.chr34 30166803 246 - 42124431 I e aotNan1.NW_018494784v1 68402 436 + 211231 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=75018.000000 s hg38.chr3_KI270779v1_alt 32829 9 + 205312 CTGATCCCA s panTro5.chr3 200025263 9 + 202621043 CTGATCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7405 9 + 190779 CTGATCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857173 9 - 880730 CTGATCCCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197062 8 + 180051392 CTGAT-CCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261510 8 - 181584905 CTGAT-CCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22313 9 - 100774 CTGATCCCA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593831 9 - 91010382 CTGATCCCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31618 9 + 930449 CTCATCCCG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870190 9 + 1687011 CTGATCCCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144056 9 - 204313951 CTGATCCCA i calJac3.chr2 I 362 C 0 s saiBol1.JH378155 106271 9 - 16417988 CTGATCCCA i saiBol1.JH378155 I 368 C 0 s cebCap1.NW_016108150v1 206473 9 + 306014 CTGATCCCA i cebCap1.NW_016108150v1 I 368 C 0 s aotNan1.NW_018494784v1 68838 9 + 211231 CTGATCCCA i aotNan1.NW_018494784v1 I 436 C 0 s otoGar3.GL873745 34486 9 + 2165740 CTGGTCCCG i otoGar3.GL873745 I 488 C 0 s dasNov3.JH577625 541601 9 + 913073 CTGGCTCCA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46077430 504 - 120421639 I e canFam3.chr34 30166803 246 - 42124431 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=288934.000000 s hg38.chr3_KI270779v1_alt 32838 37 + 205312 TGGAATAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTAT s panTro5.chr3 200025272 37 + 202621043 TGGAATAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7414 37 + 190779 TGGAATAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857182 37 - 880730 TGGAATAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197070 37 + 180051392 TGGGACAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261518 37 - 181584905 TGGGACAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22322 37 - 100774 TGGGACAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593840 39 - 91010382 TGGGACAGATC--------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31627 37 + 930449 TGGGACAGA----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870199 113 + 1687011 CAGGACAGACTCTCTACCGTTCATAGAATCGGATTGTCAGTCCTGAAGTAGAGTTGTGGTTCCCAGTCTGATCCCACGCGACAGACCCTCTACCGTTCATAGAATCTGATTGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144065 37 - 204313951 TGGGCTAGG----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106280 37 - 16417988 TGGGCTGGG----------------------------------------------------------------------------CCCTCTACCATTCATGGAATCTGATTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206482 37 + 306014 TGGGCTAGG----------------------------------------------------------------------------CCCTCTACCATTCATAGAATCTGATTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 68847 37 + 211231 TGGGCTAGG----------------------------------------------------------------------------CCCTCTGCCATTCGTAGAATCTGATTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 34495 37 + 2165740 TGGGATAGA----------------------------------------------------------------------------CTCACTGTCATTTATAAAATCTGGCTCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077934 37 - 120421639 tgtAGCAGT----------------------------------------------------------------------------CCATCTATTGTTCATGAAGTCTGACTGC i mm10.chr13 I 504 C 0 s dasNov3.JH577625 541610 35 + 913073 CAGGACAGA------------------------------------------------------------------------------CTTTAATGTTGATGGGATCTGCATGT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30166803 246 - 42124431 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=3685145.000000 s hg38.chr3_KI270779v1_alt 32875 367 + 205312 CAGTCCCT--------------------------------------------TCTCCAGGTGC------GAATGTGCCTACT-----------TC--TCCCTGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCCAG-CAGTTGCTC-----CTTT-TATCTTTGTC----------AAGCTCTTTCACTGGCACAAGAGTCTTCATGTTTGGCATAGTGGAACCTGTGCTTGACAGGTGAATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAGG s panTro5.chr3 200025309 359 + 202621043 CAGTCCCT--------------------------------------------TCTCCAGGTGC------GAATGTGCCTACT-----------TC--TCCCCGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TATGCCCAG-CAGTTGCTC-----CTTT-TATCTTTGTC----------AAGCTCTTTCACTGGCACAAGAGTCTTCATGTTTGGCATAGTGGAACGTGTGATTGACAGGTGAATTTTTCTTTCCCAGATTTCTGCT-------CAGTAGTGGATCATGAATTTGATGCAGTGATGGTAGGCGCTAGAAGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7451 367 + 190779 CAGTCCCT--------------------------------------------TCTCCAGGTGC------GAATGTGCCTACT-----------TC--TCCCCGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCCAG-CAGTTGCTC-----CTTT-TATCTTTGTC----------AAGCTCTTTCACTGGCACAAGAGTCTTCATGTTTGGCATAGTGGAACGTGTGATTGACAGGTGAATTTTTCTTCTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857219 364 - 880730 CAGTCCCT--------------------------------------------CCTCCAGGTGC------GAATGTGCCTACT-----------TC--TCCCCGCGCTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCTTG-----TGTGCCCAG-CAGTTGCTC-----CTTT-TATCTTTGTC----------AAGCTCTTTCACTGGCACA--AGTCTTCATGTTTGGCATGGTGGAACGTGTGATTGACAGGTGAATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCCGAGGCAGGGTTGAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAAGTAAGAGAAAGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197107 366 + 180051392 CAGTCCCT--------------------------------------------TCTCCACGTGC------GAATGTGCCCACT-----------TC--TCCCCGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAG-CAGTTGGTC-----CTTT-TGTCTTTGTC----------AAGCTCCTTCACTGTAACAAGAGTCTTCGTGGTTGGCATAGTGGAGCACGTGATTGACAGGTGCGTTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCGGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCGGCACAGGTAAGAGAAAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261555 366 - 181584905 CAGTCCCT--------------------------------------------TCTCCACGTGC------GAATGTGCCCACC-----------TC--TCCCTGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAG-CAGTTGGTC-----CTTT-TGTCTTTGTC----------AAGCTCCTTCACTGTAACAAGAGTCTTCGTGGTTGGCATAGTGGAGCACGTGATTGACAGGTGCGTTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCGGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTCATACAGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCGGCACAGGTAAGAGAAAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22359 366 - 100774 CAGTCCCT--------------------------------------------TCTCCACGGGC------GAATGTGCCCACT-----------TC--TCCCCGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAG-CAGTTGGTC-----CTTT-TGTCTTTGTC----------AAGCTCCTTCACTGTAACAAGAGTCTTCGTGGTTGGCATAGTGGAGCACGTGATTGACAGGTGTGTTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCGGCACAGGTAAGAGAAAGG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89593879 366 - 91010382 CAGTCCCT--------------------------------------------TCTCCACGTGC------GAATGTGCCCACT-----------TC--TCCCTGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAG-CATTTGCTC-----CTTT-TGTCTTTGTC----------AGGCTCCTTCACTGTAACAAGAGTCTTCGTGTTTGGCATAGTGGAGCACGTGATTGACAGGTGCATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGCGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACCACATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGTGCAGGTAAGAGAAAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 31664 365 + 930449 CAGTCCCT--------------------------------------------TCTCCACGTGC------GAATGTGCCCACT-----------TC--TCCCCGCACTGTTCA-------GGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAG-CAGTTGGTC-----CTTT-GGTCTTTGTC----------AAGCT-CTTCACTGTAACAAGAGTCTTCGTGGTTGGCATAGTGGAGCACGTGATTGACAGGTGCATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAGG i manLeu1.NW_012107609v1 C 0 C 0 s colAng1.NW_012116910v1 870312 365 + 1687011 CAGTCCCT--------------------------------------------TCTCCGCGTGC------GAATGTGCCCCCC-----------TC--TCCCCGCAGTGTTCA-------GGG--------CTCAGCCCC-GGACAGGATGGAGG-CCCTG-----TGTGCCTGG-CAGGTGGTC-----CTTG-TGTCTTTGTC----------AAGCTCCTTCACTGTAACAAGCGTCTTCGTGTTTGGCGTAGTGGAGCACGTGATTGACAGGTGAATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCGGGC-TTGCGAGCTGCCTTTGGCCTTTGTGAGGCAGGGTTTAATACAGCGTGTGTCACAAAGCTGTTTCCTACCAGGTCACACACTGTCGCAGCGCAGGTAAGAGAAAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144102 364 - 204313951 CAGTCCCT--------------------------------------------TCTCCACGTGT------GGACGTGCCCACC-----------TC--TTCCCGCACTGTTCA-------GTG--------CTCAGCCCCGGGACAGGATGGAGG-CCTTG-----TGGGCCTAG-CAGTTGCTC-----CTTT-TATCCTTTTC----------AAGCTCTTGAAC--TAACCATAGTCTTCGTGTTTGGCATAGTGGAATATGCGATTGGCAGGTGAATTTTTATTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGACCATGAATTTGATGCCGTGGTGGTGGGCGCTGGAGGGGCAGGC-CTGCGAGCTGCGTTTGGGCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCCACCAGGTCACACACTGTTGCAGCCCAGGTAAGAGAAAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106317 365 - 16417988 CAGTCCCT--------------------------------------------TCTCCACGTGT------GAACGTGCCCACC-----------TC--TTCCCGCACCGTTCA-------GTG--------CTCAG-CCCGGGACAGGATGGAGG-CCCTG-----TGGGCCTAG-CAGTTGCTC-----CTTT-TACCTTTTTC----------AAGCTCTTGCACTGTAACCATAGTCTTCATGTTTGGCATAATGGAATATGTGATTGACAGGTGAATTTTTATTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTGGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCGTTTGGCCTTTCTGAGGCAGGGTTTAATACGGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCCCAGGTAAGAGAAAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206519 361 + 306014 CAGTCCCT--------------------------------------------TCTCCACGTGT------GAACGTGCCCGCC-----------TC--TCCCCGCACTGCTCA-------GTG--------CTCAG-CCCGGGACAGGATGGAGG-CCCTG-----TGGGCCTAGCCAGTGGCTC-----CTTT-TATCTTTTTC----------AAGCTCTGT-----AAACCATAGTCTTCATGTTTGGCATAGTGGAATATGTGATTGACAGGTGAATTTTTATTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTGGGCGCTGGAGGGGCAGGC-CTGCGAGCTGCGTTTGGCCTTTCTGAGGCAGGGTTTAATACGGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCCCAGGTAAGAGAAAGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 68884 366 + 211231 CAGTCCCT--------------------------------------------TCTCCACGTGT------GAACGTGCCCAGC-----------TC--TCCCCGCACTGCTCA-------GTG--------CTCAGCCCCGGGACAGGATGGAGG-CCCTG-----TGGGCCTAG-CCGTTGCTC-----CTTT-TGTCTTTCTC----------AAGCTCTTGCACTGTAACCATAGTCTTCGTGTTTGGCATGGTGGAATATGTGATTGACAGGTGAATTTTTATTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGACGCAGTGGTGGTGGGCGCCGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCCGCCCAGGTAAGAGAAAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 34532 368 + 2165740 TGGTCCCT--------------------------------------------TTTGTATGTGA------GGATGTGCCCACC----------ATC--CCTTAGCACTGTTTAAGGACTGGTG--------CTTAGCTCTGGGATAGAA-GGGGG-AACTG-----TGTGCACAG-TGGTCACTT-----CTTC-C-TCTTCCTC----------AGGCTCTTTTACTGGAACTGCAGTCTTTGTG-TTGGCATAGTTGAATGTGTGAGTGACAGGTACATTTTTCTTTTTCAGATTTCTGCTCAGTATCCGGTAGTTGATCATGAATTTGATGCAGTGGTAGTGGGTGCTGGAGGGGCAGGC-TTGCGTGCTGCCTTCGGCCTTTCTGAGGCAGGGTTCAATACAGCATGTGTTACAAAGCTCTTTCCTACCAGGTCACACACCGTCGCAGCACAGGTAAGAGGC--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46077971 343 - 120421639 TGGTTCAT--------------------------------------------TGTAC-------------------CACACT-----------TCAACACCAAGAATGCACA------------------CTCAG-ATCAGAACAGGATTGAAA-GCCTTCTTTCTGTGCACAG-CAGCTATTC-----TTTC-C-----TGTG----------A-----TTATTTTGTAATTATAGTCTTGATGTTTTATGAAGTTAAATATGTAACAAATAGCTGAA--TTTCCTTTTCAGATTTCTACTCAATACCCAGTGGTGGATCATGAATTTGATGCTGTGGTTGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACTGCATGCCTTACAAAGCTCTTTCCTACCCGATCACATACTGTTGCAGCACAGGTAAGAAAAAG- i mm10.chr13 C 0 C 0 s canFam3.chr34 30167049 410 - 42124431 CAGTTCCTTGCTTTGAGGCTGTACCTCTTCAGCATTTCAGCTCTTGGGGGGCTTTCCAGGTGCCGGGATGAGTGTGGTCCCT-----------TT--GGCAGGC-CTGTTGG-------GGTGGGCTGCCCTCACCACATACGCCGGGTGGAGGCCCCTG-----TTTGCC--G-CAGCTGCTC-----TTTTGTGCCTCTTTCCGTTGTGCCTGAACTCTGCCGCTGCACCCATAGTCCC-----------------------TGGCTGACAGGTGAATTGTTCCTTTCCAGATCTCTACGCAGTACCCAGTGGTGGACCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCGGGC-TTGCGAGCTGCATTTGGCCTTTCAGAGGCTGGGTTTAACACGGCCTGCGTCACAAAGCTCTTTCCCACCAGATCACACACCGTTGCCGCCCAGGTAAGAGAAAGG i canFam3.chr34 I 246 C 0 s dasNov3.JH577625 541645 363 + 913073 TGGTCCTT--------------------------------------------CTTTGATATA-------GAATGTACCCACCACATACCTCAACC--TTTTTGTGCTGT--G-------AGG--------CTCAGTCCCAGGACAGGATG-----CTCT------TTTATTTCG-T-GTTACTTCATGACTTT-AATTTTCTCC----------AAGCTATTTCACTGTAACCACAGTTCTACTGTT----------GAATATGTGGATAACAGGTGGATGTTTCTTTTCCAGATTTCTACTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTGGGCGCTGGAGGGGCAGGT-CTGCGTGCTGCATTTGGCCTTTCTGAGGCAGGATTTAACACGGCATGTGTCACAAAGCTCTTTCCCACCAGGTCACACACTATTGCAGCACAGGTAAGAGAAAAG i dasNov3.JH577625 C 0 I 958 e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=618026.000000 s hg38.chr3_KI270779v1_alt 33242 92 + 205312 TGCCCCACTGTGCTCCCACTCCGTGC-AGGTCCCGCGCAGCCTCGCACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCTGTGC---TCCAGCCAC s panTro5.chr3 200025668 92 + 202621043 TGCCCCACTGTGCTCCCACTCCGTGC-AGGTCCCGCACAGCCTCGCACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCGTGC---TCCAGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7818 92 + 190779 TGCCCCACTGTGCTCCCGCTCCGTGC-AGGTCCCGTGCAGCCTCGCACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCGTGC---TCCAGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857583 92 - 880730 TGCCCCACTGTGCTCCCACTCCGTGC-AGGTCCCGCGCAGCCTCGCACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCGTGC---TCCAGCCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197473 92 + 180051392 TGCCCCACCGTGCTCCCACTCTGTGC-AGGTCCCGCACAGCCTCGCGCTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCATGC---TCCAGCCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180261921 92 - 181584905 TGCCCCACCGTGCTCCCACTCTGTGC-AGGTCCCGCACAGCCTTGCGCTTTCTACCTGGGCAgcctcctgcctcctccccatgc---tccagccac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22725 92 - 100774 TGCCCCACCGTGCTCCCACTCTGTGC-AGGTCCCGCACAGCCTTGCGCTTTCTACCTGGGCAgcctcctgcctcctccccatgc---tccagccac i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594245 91 - 91010382 TGCCCCACCGTGCT-CCACTCTGCGC-AGGTCCCGCCCAGCCTTGCGCTTTCTACCTGGGCAgcctcctgcctcctccccatgc---tccagccac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 32029 92 + 930449 TGCCCCGCCGTGCTCCCACTCTGTGC-AGGTCCCGCACAGCCTTGCGCTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCATGC---TCCAGCCAC i manLeu1.NW_012107609v1 C 0 M 804 s colAng1.NW_012116910v1 870677 91 + 1687011 GGCCCCACCATGCTCCCACTCTGTAC-AGGTCCCGCACAGCCTTGCGCTTTCTACCCGGGCAGCCTCCTG-CTCCTCCCCATGC---TCCAGCCAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144466 91 - 204313951 TGCCCCGCCACGCTCTCACTGCCTGC-ATGT-CTGCCCAGCCTTGCGCCTTCCACCCGGGCGGCCTCCTGCCTCCTCCCCATGC---TTCAGCCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106682 90 - 16417988 TGCCCCGCCATGCTCTCACTGCCGGC-ATGC-CTGCACGGCCTTGCACCTTCCACCTGGGCGGCCTCCTGCCTCCT-CCCATGC---TTCAGCCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206880 91 + 306014 TGCCCCGCCATGCTCTCGCTGCCTGC-ATGT-CTGCACAGCCTTGCGCCTTCCCCTTGGGCGGCCTCCTGCCCCCTTCCCATGC---TTCAGCCAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69250 69 + 211231 TGCCCCGCCACGCTCTCGCTGCCTGC-GTGT-----------------------CCTGGGCGGCCTCCTGCCTCCTCCCCATGC---TTCAGCCAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 34900 80 + 2165740 --CCTCTAGATCCTTTCACCTTGTGCAATGTCCCAAACAG------ACCCACTGCCTGAGCAGCCTCCTGCCTCCTTCCTGTGA---TGTG----- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46078314 79 - 120421639 -GCCCTCTTTTGATACCA------AC-AGATCTTGTACAGCACCACCTCTCCTA------TAATACAAAGTCTTCTTATTAAGC---TTCAGCCAC i mm10.chr13 C 0 I 5 s canFam3.chr34 30167459 78 - 42124431 ---------GTGGTTTAGTGGTTTGG-AA--CCTGCACAGCAGGGCGCAGTCTCCT------GCCACAAGCCTCCTTCCCACAACAGTACAGCCAC i canFam3.chr34 C 0 I 1 e dasNov3.JH577625 542008 958 + 913073 I e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=945209.000000 s hg38.chr3_KI270779v1_alt 33334 151 + 205312 TTGGCCTCTTGCTGTGCCTT----ACT--CAGCTCACCCATTCAGGG-GTCTCTCCCTGGA--GCCTC---TTCCCTG---GGGACTTTGAAGGGCGGGAGCCTTGTTGTCACTCTTAATTCAGACTCCAGTCACACTTGGGTTTTCTCTGACCAT--------CTACCCTCCC--- s panTro5.chr3 200025760 151 + 202621043 TTGGCCTCTTGCTGTGCCTT----ATT--CAGCTCACCCATTCAGGG-GTCTCTCCCTGGA--GCCTC---TTCCCTG---GGGACTTTGAAGGGCGGGAGCCTTGTTGTCACTCTTAATTCAGACTCCAGTCACACTTGGGTTTTCTCTGACCAT--------CTACCCTCCC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 7910 151 + 190779 TTGGCCTCTTGCTGTGCCTT----ACT--CAGCTCACCCATTCAGGG-GTCTCTCCCTGGA--GCCTC---TTCCCTG---GGGACTTTGAAGGGCGGGAGCCTTGTTGTCACTCTTAATTCAGACTCCAGTCACACTTGGGTTTTCTCTGACCAT--------CTACCCTCCC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857675 149 - 880730 ATGGCCTGTTGCTGTGCCTT----ACT--CAGCTCACCCTCTC--GG-GTCTATCCCTGGA--GCCTC---TTCCCTG---GGGACTTTGAAGGGCGGGAGCCTTGTTGTCACTCTTAATTCAGACTCCAGTCACACTTGGGTTTTCTCTGACCAT--------CTACCCTCCC--- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197565 163 + 180051392 ATGGCCTCTTGCTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGCG-GTCTTTCCCTGGA--GCCTC---TTCCCTG---GAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTCGGGTTTTCTTTGACCATCTCGCCTACTTCCCTCCC--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262013 163 - 181584905 atggcctcttgcTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGCG-GTCTTTCCCTGGA--GCCTC---TTCCCTG---GAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTCGGGTTTTCTTTGACCATCTCGCCTACTTCCCTCCC--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22817 163 - 100774 atggcctcttgcTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGCG-GTCTTTCcctgga--gcctg---ttccctg---gagacttggaagggctggagcctTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTTGGGTTTTCTTTGACCTTCTCGCCTACTTCCCTCCC--- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594336 163 - 91010382 atgacctcttgcTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGCG-GTCTTTCCCTGGA--GCCTC---TTCCCTG---GAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTTGGGTTTTCTTTGACCTTCTCGCCTACTACCCTCCC--- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 870768 163 + 1687011 ATGGCCTCTTGCTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGTG-GTCTTTCCCTGGA--GCCTG---CTCCCTG---GAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTTGGGTTTTCTTTGACCATCTCGCCTACTTTCCTCCC--- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144557 161 - 204313951 ATGGCCTCTTGCTGTGCATTGCTCTCT--CAGCT--CCCTCTCAGGG-GTTTTTGCCTGGA--GCCTC---TTCCATG---GGGACTTTGAAGAGCTGGAGCCTTGCTGTCACTCTTAATTGGAACTTCAGTCACAGCTGGGTTTTCTCTGACCATCTCGCCTACTACCCTCCC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106772 161 - 16417988 ATGGCCTGTTGCTGTGCCTTGCTCACT--CAGCT--CCCTCTCAGGG-GTTTTTTCCTGGA--GCCTC---TTCCATG---GGGACTTTGAAGAGCTGAAGCCTTGCCGTCACTCTTACTTGGGACTTCAGTCGCAGTTGGGTGTTCTCTGACCGTCTCGCCCACTGCCCTCCC--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 206971 160 + 306014 ATGGCCTCTTGCTGTGCCTTGCTCACT--CACCT--CTCTCCCAGGG-GTTTTTTCCTGGA--GCCTT---TTCCATG---GGGACTTTGAAGAGCTGAAGCCTTGCTGTCACTCTTAATTGGGAC-TCAGTCACAGTTGGGTTTTCTCTGACCATCTTGCCTACTACCCTCCC--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69319 161 + 211231 ATGGCCTCTTGCTGTGCCTTGCTCACT--CAGCT--CCCTCTCAGGG-GTTTCTGCCTGGA--GGCTC---TTCCATG---GGGACTTTGAAGAGCTGGAGGCTTGCTGTCGCTCTTAATTGGGACTTCAGTCACAGTTGGGTTTTCTCTGACCGTCTCGCCTGCTACCCTCCC--- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 34980 142 + 2165740 CTTGCTTCATGCTGT---------------------TATACTCTGGG-CTCTCTGCCAGGA--TTGTC---TTCCCTA---GGGACTATGCAGCACTGGAGACTTGTC-TCACTCTTA-CTGGGGCTTCAGTCATACTTGGGTCTCCTTGAACTATCCTGTGTAGTGCCCCACC--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46078398 127 - 120421639 TTGGCATC---CAGTTCATCATTCATT-----CTCACTTTCCAAG----TCACTGCTGGTA--ATCTC---TACCTCG---GGACCATTGTGGGATTGGCACCTCATTGTTATTT----------------TCATACATGGGTCTTTTC-----------CCAGCTGTCCTGCC--- i mm10.chr13 I 5 I 3094 s canFam3.chr34 30167538 157 - 42124431 TTTGTCTCCTTTTGCTCCTTGCACCCTGTCAGCTCACTCACCTTGGGTGTCTGTGCGTGTACTGCCTCCAGTCCCATGCTAGAGCC------GCTCTGGAGCCTC----TCACCTCTTCTCTG--CTCCAGTTACACTCAGGTCTTCTCTGAGCAC--------CCACCTTGCCCCC i canFam3.chr34 I 1 C 0 e dasNov3.JH577625 542008 958 + 913073 I e manLeu1.NW_012107609v1 32121 804 + 930449 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=51446.000000 s hg38.chr3_KI270779v1_alt 33485 7 + 205312 CACCCAC s panTro5.chr3 200025911 7 + 202621043 CACCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8061 7 + 190779 CACCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857824 7 - 880730 CACCCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197728 7 + 180051392 CACCCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262176 7 - 181584905 CACCCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22980 7 - 100774 CACCCAC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594499 7 - 91010382 CAGCCAC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 870931 7 + 1687011 CACCCAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144718 7 - 204313951 CACCCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106933 7 - 16417988 CACCGAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207131 7 + 306014 CACCCAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69480 7 + 211231 CACCCAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35122 6 + 2165740 C-CGCAC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30167695 7 - 42124431 TGCCCAC i canFam3.chr34 C 0 I 1308 e mm10.chr13 46078525 3094 - 120421639 I e dasNov3.JH577625 542008 958 + 913073 I e manLeu1.NW_012107609v1 32121 804 + 930449 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=150154.000000 s hg38.chr3_KI270779v1_alt 33492 25 + 205312 CCCTGCCACCCCAACACCTTAAGAA s panTro5.chr3 200025918 25 + 202621043 CTCTGCCACCCCAACACCTTAAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8068 25 + 190779 CCCTGCCACCCCAACACCTTAAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857831 25 - 880730 CCCTGCCACCCCAACACCTTAAGAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197735 25 + 180051392 CCCCACCGCCCCAACACCTTAAGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262183 25 - 181584905 CCCCACCGCCCCAACACCTTAAGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 22987 25 - 100774 CCCCACCGCCCCAACACCTTAAGAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594506 25 - 91010382 CCCCACCGCCCCAACACCTTAAGAA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 870938 25 + 1687011 CCCCACCGCCCCAACACCTTAAGAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144725 25 - 204313951 CCTCACCTCCCCAACACCGTAAGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106940 25 - 16417988 CCTCACCACCCCAACACCTTAAGAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207138 24 + 306014 CCTCACCACCCC-ATACCTTAAGAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69487 25 + 211231 CCTCACCACCCCAACACCTTAAGAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35128 13 + 2165740 C------------ATGCCCTGTGAG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46078525 3094 - 120421639 I e dasNov3.JH577625 542008 958 + 913073 I e canFam3.chr34 30167702 1308 - 42124431 I e manLeu1.NW_012107609v1 32121 804 + 930449 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1347512.000000 s hg38.chr3_KI270779v1_alt 33517 191 + 205312 AAGGAGATCA---TCTAAAGAGGAGGATTCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCTGGTGCTGCTGTCTTCTGGGACTCTCTGAGGGGTAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGTAGGGGTACAGGGGAGTGCGACTC-T--GAGTATGGAGTTTATTACTTGGCAGGA s panTro5.chr3 200025943 190 + 202621043 AAGGAGATCA---TCTAAAGAGGAGGATTCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCTGTCTTCTGCGACTCTCTGAGGGGTAAGACGGTG--GTGGGCACACATAGCCAAAGGAAGTAGGGGTACAGGGGAGTGCGACTC-T--GAGTGTGGAGTTTATTACTTGGCAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8093 190 + 190779 AAGGAGATCA---TCTAAAGAGGAGGATTCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCGCT-GTGGTGCTGTCTTCTGGGACTCTCTGAGGTGTAAGACGGTG--GTGGGCACACATAGCCAAAGGAAGTAGGGGTACAGGGGAGTGCAACTC-T--GAGTATGGAGTTTATTACTTGGCAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 857856 189 - 880730 AAGGAGATCA---TCTAAAGAGGAGGAATCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGGTGCTGTCTTCTGGGGCTCTCTGAGGGGTAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGT-GGGGTACAGGGGAGTGCGACTC-T--GAGTGTGGAGTTTATTACTTGGCAGGA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197760 190 + 180051392 AAGGAGATCA---TCTAAAGAGGAGGAATCAGAATTTAGGGTGGGGAAGGAAAGGGCAAGGGTTTTATTTGTCCCC-GTGCTGCTGTCCTCTGGAACTCTCTGAGGAGTAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-T--GAGTGTGGAGCTTATTACTTGGCAGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262208 190 - 181584905 AAGGAGATCA---TCTAAAGAGGAGGAATCAGAATTTAGGGTGGGGAAGGAAAGGGCAAGGATTTTATTTGTCCCC-GTGCTGCTGTCCTCTGGGACTCTCTGAGGAGTAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-T--GAGTGTGGAGCTTATTACTTGGCAGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23012 190 - 100774 AAGGAGATCA---TCTAAAGAGGAGGAATCAGAATTTAGGGTGGGGAAGGAAAGGGCAAGGGTTTTATTTGTCCCC-GTGCTGCTGTCCTCTGGAACTCTCTGAGGAGTAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-T--GAGTGTGGAGCTTATTACTTGGCAGGA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594531 190 - 91010382 AAGGAGATCA---TCTAAAGAGGAAGAATCAGAATTTAGGGTAGGGAAGGAAAGGGCAAGGGTTTTATTTGTCCCT-GTACTGCTGTCTTCTGGAACTCTCTGAGGAATAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-T--GAGTGTGGAGCTTATTACTTGGCAGGA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 870963 190 + 1687011 AAGGAGATCA---TCTAAAGAGGAGGAATCAGAATTTAGGGTGGGGAAGGAAAGGGCAAGGGCTGTATTTGTCCCC-ATGCTGCTGTCTTCTGGGAGTCTCTGAGGAGTAAGACGGTG--GTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGTGACTC-T--GAGTGTGGAGCTTATTACTTGGCAGGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144750 190 - 204313951 AAGGAGATCA---TCTAAAGAGGAGTAATCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCCATCCTCTGGGACTCTCTGAGGGGTGAAATGGTG--GTGGCCACAAACAGCCGAAGGAGA-GGGGGTGCCGGGAAGTGTGACTCTT--GAGTGTGGAGTTTATTTCTGGGCAGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 106965 190 - 16417988 AGGGAGATCA---TCTAAAGAGGAGGAATCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCCGTCTTCTGGGACTCTCTGAGGGGTAAGACGATG--GTGGCCACAAACAGCCGAAGGAGGTGGGGGTGCTGGGGAGTGTGACTC-T--GAGTGTGGAGTTTATTTCTTGGCAGGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207162 193 + 306014 AAGGAGATTATTTTCTAAAGAGGAGGAATCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCTGTCTTCTGGGACTCTCTGAGGGGTAAGACGGTG--GTGGCCACAAACAGCTGATGGAGGTGGGGGTGCCAGGGAGTGTGACTC-T--GAGTGTGGAGTTTATTTCTTGGCAGGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69512 190 + 211231 AAGGAGATCA---TCTAAAGAGCAGGAATCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCCATCTTCTGGGACTCTCTGAGGGGTGAGACGGTG--GTGGCCACAAACAGCCGAAGGAGGTGGGGGTGCCGGGGAGTGTGACTC-T--GAGTGTGGAGTTTATTTCTTGGCAGGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35141 178 + 2165740 AAAGAGATTA---TCTAAAGAAGAAGAATCAAAAGTTAGATTGGAGAAGAAAAAGGTGAGAGTTTCATTTGTCCCT-GTGCTGCCGTGTTCTGTA--CCTCTGAAGTATAAAGCAGAGCAGAGGCCACACACAGAAGAGGGAAGC-CTGATGCAGGGGAGTATAGTTC-TTGGAGTACAGAG-------------AATA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 542966 143 + 913073 AAATAGATTA---TCTAAAGGAAAATATTCCAAACTGAGGTTGGGGAAGAAGAGGGTGAGTGGTCCATTTGTCCCT-ACACTACCGTGTTCTGTGGC-------------AGAAGGCG--GAGGGGA----------GAGGGGGCACGGGCATCAGGGAGTGTGGCCA-T--GCG------------------------ i dasNov3.JH577625 I 958 C 0 e mm10.chr13 46078525 3094 - 120421639 I e canFam3.chr34 30167702 1308 - 42124431 I e manLeu1.NW_012107609v1 32121 804 + 930449 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=349757.000000 s hg38.chr3_KI270779v1_alt 33708 53 + 205312 AGCACTTCTAATC-TT---TAACACATGCCCGTAAATGCCGTTGGG-AAGATT-TGTTA s panTro5.chr3 200026133 53 + 202621043 AGCACTTCTAATC-TT---TAACACATGCCCGTAAATGCCGTTGGG-AAGATT-TGTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8283 53 + 190779 AGCACTTCTAATC-TT---TAACACATGCCCGTAAATGCCTTTGGG-AAGATT-TGTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 858045 53 - 880730 AGCACTTCTAATC-TT---TAACACATGCCCGTAAATGCTGTTGGG-AAGATA-TGTTA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 197950 53 + 180051392 AGTACTTCTGGTC-TT---TAACACATGCCCGTAAATGCCATTGGG-AAGATT-TGTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262398 53 - 181584905 AGCACTTCTGGTC-TT---TAAATCATGTCCGTAAATGCCATTGGG-AAGATT-TGTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23202 53 - 100774 AGTACTTCTGGTC-TT---TAACACATGCCCGCAAATGCCATTGGG-AAGATT-TGTTA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594721 53 - 91010382 AGCACTTCTGGTC-TT---TAACTCACGCCCGTAAATGCCATTGGG-AAGATT-TGTTA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 871153 53 + 1687011 AGCACTTCTGGTC-TT---TAACAGATGCCCGTAAATGCCACTGGG-AAGATT-TGTTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144940 53 - 204313951 AGCACTTCTAGTC-TT---TAACACATGCCTGTAAATGCCTTTAGG-GAGGTT-TGTta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107155 53 - 16417988 AGCACTTCTAGTC-TT---TAACATATGCCTGTAAATGCCTTTAGG-GAGGTT-TATGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207355 54 + 306014 CACACTTCTAGTCTTT---TAATACATGCCTGTAAATGCCTTTAGG-GAGGTT-TGTGa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69702 53 + 211231 AGCACTTCTGGTC-TT---TAACACATGCCTGTAAATGCCTTTAGG-AAGGTT-TGTta i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35319 56 + 2165740 AGCATGTCTCATC-TTTAATAATACATACCCATAAATAGAATTGGG-GACATT-TTATG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30169010 53 - 42124431 AGCACTTCTTGTC-TG---TAACACATGCCTGTAAATACCAGTAGC-AACATTCTGTC- i canFam3.chr34 I 1308 C 0 s dasNov3.JH577625 543109 41 + 913073 ----------GTC-TT---CAGTA-ATGCCC-TGACTGCCTTGGGTCGTGCTT-TGGC- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46078525 3094 - 120421639 I e manLeu1.NW_012107609v1 32121 804 + 930449 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=173849.000000 s hg38.chr3_KI270779v1_alt 33761 25 + 205312 A-TAAAATTAT-GCGGAGAGattcatg s panTro5.chr3 200026186 25 + 202621043 A-TAAAATTAT-GTGGAGAGattcatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8336 25 + 190779 A-TAAAATTAT-GTGGAGAGattcatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 858098 26 - 880730 ATTAAAATTAT-GTGGAGAGattcatg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198003 25 + 180051392 A-TAACATTAT-CTGGAAAGatttgtt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262451 25 - 181584905 A-TAACATTAT-CTGGAAAGatttgtt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23255 25 - 100774 A-TAACATTAT-CTGGAAAGatttgtt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89594774 25 - 91010382 G-TAACATTAT-CTGGAAAGatttgtt i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 871206 25 + 1687011 G-TACCATTAT-CTGGGAAGatttgtt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 144993 25 - 204313951 a-taaaattat-ctggaaagatttgtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107208 25 - 16417988 A-TAAAATTAT-CTGGAAAGatttgtg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207409 25 + 306014 a-taaaattat-ctggaaagatttgtt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69755 25 + 211231 a-taaaattat-ctggaaagatttgtt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35375 25 + 2165740 A-TAAAATGAT-CTGAATAGGTTTGAG i otoGar3.GL873745 C 0 I 3 s mm10.chr13 46081619 24 - 120421639 A-TAAAATT-T-CCAGATAGATTTGTT i mm10.chr13 I 3094 C 0 s canFam3.chr34 30169063 26 - 42124431 A-TAAAATGatcccagacagatttgtt i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543150 23 + 913073 A-TGAAACGAT---GGAGGGGGttatt i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012107609v1 32121 804 + 930449 M e cerAty1.NW_012004452v1 178813 2327 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2406477.000000 s hg38.chr3_KI270779v1_alt 33786 305 + 205312 gagtaccttttctg-tgccagatacgttaggtaataagcatattacaggtagcctttcactcactgctccagtcagccctt-----cctggagttc-cctctgtctccaccacacagatgaggagactga-ggctaagggaTGGAAT--------------CACTGGGTGAGTCTGGGAGGG-GTTGTGATCTGGAATCTGTCAGGCCT--------GGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCATG-TGAGTAGCTGGCTTTCTCTGAATC--------------CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGT s panTro5.chr3 200026211 305 + 202621043 gagtaccttttctg-tgccagatacgttaggtaataagcatattacaggtagcctttcactcactgctccagtcagccctt-----cctggagttc-cctctgtctccaccacacagatgaggagactga-ggctaagggaTGGAAT--------------CACTGGGTGAGTCTGGGAGGG-GTTGTGATCTGGAATCTGTCAGGCCT--------GGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCATG-TGAGTAGTTGGCTTTCTCTGAATC--------------CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8361 305 + 190779 gagtaccttttctg-tgccagatacgttaggtaataagcatattacaggtagcctttcactcactgctccagtcagccctt-----cctggacttc-cctctgtctccaccacacagatgaggagactga-ggctaagggaTGGAAT--------------CACTGGGTGAGTCTGGGAGGG-GTTGTGATCTGGAATCTGTCAGGCCT--------GGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCATG-TGAGTAGTTGGCTTTCTCTGAATC--------------CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 858124 307 - 880730 gagtaccttttctg-tgccagatacgttaggtaataagcatattacaggtagcctttcactcactgctccagtcatccctt-----cctggagttc-cctctgtctccaccacacagatgaggagactgagggctaagggaTGGAAT--------------CACTGGGTGAGTCTGGGAGGG-GTTGTGATCTGGAATCTGTCAGGCCT--------GGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTCAACCGCG-TGAGTAGTTGGCTTTCTCTGAATC--------------CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGGTGGGGCTCCTGTTTGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198028 305 + 180051392 gagtaccttttctg-tgccagatatgttaggtaataagcatattacaggtagcctttcactcactgctccagtcagccctt-----cctggagttc-cctctgtctccaccacacagatgaggagactga-ggctaagggattgaat--------------cacCGGGCGAGTCGGGGGAGG-GTCGTGACCCGGAATCTGTCGGGCCT--------CGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCGTG-TGAGGAGTTGGCTTTCTCTGAATC--------------CCCCAGTGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262476 305 - 181584905 gagtaccttttctg-tgccagatatgttaggtaataagcatattacaggtagcctgtcactcacggctccagtcagccctt-----cctggagttc-cctctgtctccaccacacagatgaggagactga-ggctaagggaTTGAAT--------------CACCGGGCGAGTCAGGGGAGG-GTCGTGACCCAGAATCTGTGGGGCCT--------CGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCGTG-TGAGGAGTTGGCTTTCTCTGAATC--------------CCCCAGTGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23280 305 - 100774 gagtaccttttctg-tgccagatatgttaggtaataagcatattacaggtagcctgtcactcacggctccagtcagccctt-----cctggagttc-cctctgtctccaccacacagatgaggagactga-ggctaagggattgaat--------------cacCGGGCGAGTCAGGGGAGG-GTCGTGACCCAGAATCTGTGGGGCCT--------CGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCGTG-TGAGGAGTTGGCTTTCTCTGAATC--------------CCCCAGTGGGTGGATTTGGGTCTGGAAGACAAAGCTGGGGCTCCTGTTTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 181140 304 + 218577 gagtaccttttctg-tgccagatatgttaggtaataagcatattacaggtagcctgtcactcacggctccagtcagccctt-----cctggagtt--cctctgtcgccaccacacagctgaggagactga-ggctgagggattgaat--------------cacCGGGCGAGTCAGGGGAGG-GTCGTGACCCGGAATCTGTCGGGCCT--------CGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACCGCG-TGAGGAGTTGGCTTTCTCTGAATC--------------CCCCAGTGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGT i cerAty1.NW_012004452v1 I 2327 C 0 s chlSab2.chr4 89594799 305 - 91010382 gagtaccttttctg-tgccagatatgttaggtaataagcatattacaggtagcctgtcactcactgctccagtcagccctt-----cctggagttc-cctctgtctccaccacacagctgaggagactga-ggctaagggaTTGAAT--------------CACCGGGCGAGTCGGGGGAGG-GTCGTGACCCGGAATCTGTCGGGCCT--------CGCTGC--------TCCTCTGCTGAGGTCAG-----CCCTCACTGGGAGTC-ACTGCG-TGAGGAGTTGGCTTTCTCTGAATC--------------CCCCAGTGGGTGGATTTGGACCTGGAAGACAAAGCTGGGGCTCCTGTTTGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 871231 303 + 1687011 gagtaccttttctg-tgccagatatgttaggtaataagcatattacaggtagcctttccctcacggctccggtccgccctt-----cctggagctc-cctctgtctccaccacacagatgaggagactga-ggctaagggattgaat--------------cactGGGCGAG-CTGGGGAGG-GTTGTGACCCGGAATCTGTCGGGCCT--------CGCTGC--------TCCTCCGCTGAGGTCAG-----CCCTCGCTGGGAGTC-ACCGCG-TGAGGAGTTGGCTTTCTCTGGA-C--------------CCCCAGTGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCGCCTGTCTGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145018 304 - 204313951 gagtaccttttctg-tgccaggtgtgttaggtaataagcatatcacaggtagccttttgctcactgctccaatcagccctt-----cctagagttc-cctctgtctccaccacacagatgatgagactga-ggctaagggagtgaat--------------cactGGGCGAGTCAGGGGAGGGGTTGTGATCTGGAATCTGCCCGGCCT--------TGCTGC--------CCCTCTGCTGAGGGCAG-----CTCTCCCTGGGAGTC-ACTGCA-TGAGGAG-TGGCTTTCTCTGAAT---------------CCCTGGTGGGTGGATTTGGGCCTGGAAGACAAAGTTGGGGCTCCTGTTTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107233 303 - 16417988 gagtactttttctg-tgccaggtgtgttaggtagtcagcatatcacaggtagcctttcgctcactgctccaatcagccctt-----cctggagctc-cctctgtctccaccacacagatgaggagactga-ggctaagggagtgaat--------------cactGGGCGAGTCAGGGGAGGAGTTGTGATCTGGAATCTGTCCGGCCT--------TGTTGC--------CCCTCTGCTGAGGGCAG-----CTCTCCCTGGGAATC-ACTGCA-TGAGGAG-TGGCTTTCTCTGAGT---------------CCCTGGTGGGTGGATTTGGGCCT-AAAGACCAAGTTGGGGCTCCTGTTTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207434 304 + 306014 gagtaccttttctg-tgccaggtgtgttacgtaatcagcatatcacaggtagcctttcgctcaccgccccaatcagccctt-----cctggagttc-cctctgtctgcaccacacagatgaggagactga-gactaagggagtgaat--------------cactGGGCGAGTCAGGGGAGGGGTTGTGATCTGGACTCTGTCTGGCCT--------TGCTGC--------CCCTCTGCTGAGGGCAG-----CTCTCCCTGGGAGTC-ACTGCG-TGAGGAG-TGGCTTTCTCAGAAT---------------CCCTGGTGGGTGGATTTGAGCCTGGAAGACAAAGTTGGGGCTCCTGTTTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 69780 304 + 211231 gagtaccttttctg-tgccaggtgtgttaggtaatcagcatatcacaggtagcctttcgctcactgctccaatcagccctt-----cctggagttc-cgtctgtctccaccacacagatgaggagactca-ggctaggggagtgaat--------------cactGGGCGAGTCAGGGGAGGGGCTGTGATCTGGAATCTGTCCGACCT--------TGCTGC--------CCCTCTGCTGAGGGCAG-----CTCTCCCTGGGAGTC-CCTGCA-TGACGAG-TGGCTTTCTCTGAAT---------------CCCTGGTGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCCGTTTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35403 273 + 2165740 GAGGACCTTTTCTG-TGCCAGGTATGTTAAGTACT---CATGTTATGTATAACCTTTGACTCA---CTCCAAAAAGGCCTT-----TGAGGAGTTC-ACGC-ATCTCTATTGCACAGGTCAGGAGAC--A-GACTAAG-----------------------------------CAGGGAGTA-GTTGTGATTTGGA-TCCAGCAGGCCT--------CACTG------------TCTACTGATGTCAG-----GCCTCCCTGAGAGTC-ACCGCACTGAGTAGTTGGCTTTCTTTGAATCA-----------GGTCCTGGGGAGGAGA-TGGGCCCCAGAAGACGCAGCTGGGGCTCCCGCTTAT i otoGar3.GL873745 I 3 C 0 s mm10.chr13 46081643 251 - 120421639 --GAACATCTTCAGTTGTTAGGTA-GATAAACAATGGCTAAGTTACAAGGATCTTTTC---------------TAGTCTTTACAGGCCTGGAGATC-AAGTAACATTCCCATTACAAATAAG---------AATTAAG--------C--------------CATCTGTCTACTC-GGGAAGT-CTCATGACTTGGAATCTGTCCTGCCT--------TACAGC--------TCCT----------TAA-----CCCTCATGAAGAGTC-ACCACA-TACGGAGTTTGCTGTCCCTGAATCA-----------GATCTGAGGGGGAGG---TGGGCTGCAGAGA--------------CTGTTAA- i mm10.chr13 C 0 C 0 s canFam3.chr34 30169089 229 - 42124431 gagtacctgttatg-tgccaggt-tgggaagtgatgagcattgtg-----aacc------------ctccagttagc---------tctggagttg-ggcttcttgtcccttcttaggtgggaggactga-ggctgaggga----------------------------------------g-gtC---------------------------------CTGT--------ACCCCTACTGCAGTCAGGT---CCCTTACAGACAGTT-AGGTTG-AAAGCATTTGTTTTTTTCTGAACC--------------CAGTTCTGGGA-----TGAGCCTAGAAGATACCACTGGGGCCTCTCCTTGT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543173 349 + 913073 gagcaccttctctc-tgccaggta-gttctgtgcttggcattttgctcgtaacctctcacttagctgtccaaacagctctt-----caaggaatttggctccttccccattg-agggacaaggagac-gg-ggctgaggaattaaataacatggcccacagcgctcggctcgcccgccaaagagccgtgcttcggggtct--cgggcctctgcctcacGCTGCCAGGAGGTCCCCCCGCAGGGTTCAGGCAGACTGTCTCGCACAGTT-ACCGCA-CAGGCAGCTTGCTTTGTGTGAGTCAGGGTGGGCAGGGGCATTGGCAAGGAGA--TGGACGTGGAAAACTGGGACGGGCCTGTCACCCGT i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012107609v1 32121 804 + 930449 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=208415.000000 s hg38.chr3_KI270779v1_alt 34091 18 + 205312 GGCTTGTAAGGAGTGGTT s panTro5.chr3 200026516 18 + 202621043 GGCTTGTAAGGAGTGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8666 18 + 190779 GGCTTGTAAGGATTGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 858431 18 - 880730 GGCTTGTAAGGAGTGGTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198333 18 + 180051392 GGCTTGTAAGGAGTGGTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262781 18 - 181584905 GGCTTGTAAGGAGTGGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23585 18 - 100774 GGCTTGTAAGGAGTGGTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 181444 18 + 218577 GGCTTGTAAGGAGTGGTT i cerAty1.NW_012004452v1 C 0 M 3065 s chlSab2.chr4 89595104 18 - 91010382 GGCTTGTAAGGAGTGGTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 32925 18 + 930449 GGCTTGTAAGGAGTGGTT i manLeu1.NW_012107609v1 M 804 C 0 s colAng1.NW_012116910v1 871534 18 + 1687011 GGCTTGTAAGGAGTGCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145322 18 - 204313951 GGTTTGTAAGGAGTGGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107536 18 - 16417988 GGCCTGTAAGGAGTGGTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207738 18 + 306014 GGCTTATAAGGAGTGGCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70084 18 + 211231 GGCTTGTAAGGAGTGGTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35676 18 + 2165740 CACTTGTAAGGAGTGCTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46081894 18 - 120421639 GATATGTAAGCAGTTGTA i mm10.chr13 C 0 I 1 s canFam3.chr34 30169318 13 - 42124431 AGCTTGTAAGGTT----- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543522 18 + 913073 GCCGTGTAAGGAGTGCTC i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2204899.000000 s hg38.chr3_KI270779v1_alt 34109 184 + 205312 GGTGTTTC----CAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGCGGGAGGCTCTGG-GTGCTCTG s panTro5.chr3 200026534 184 + 202621043 GGTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGCGGGAGGCTCTGG-GTGCTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8684 184 + 190779 GGTGTTTC----CAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGGGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGTCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGCGGGAGGCTCTGG-GTGCTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 858449 184 - 880730 GGGGTTTC----CAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGAGAACAACTGGAGGTGGCACTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGATGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGCGGGAGGCTCTGG-GTGCTCTC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198351 184 + 180051392 GGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCATGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCGGGAGGCTCTGG-GCGCCCTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262799 184 - 181584905 GGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCGGGAGGCTCTGG-GCGCCCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23603 184 - 100774 GGTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCGGGGGGCTCTGG-GCGCCCTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595122 184 - 91010382 GGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACTATGAAGGGCTCCGACTGACTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCAGGGGGCTCTGG-GCGCCCTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012107609v1 32943 184 + 930449 GGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCGGGGGGCTCTGG-GCGCCCTC i manLeu1.NW_012107609v1 C 0 N 0 s colAng1.NW_012116910v1 871552 184 + 1687011 GGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCCCCTGCCGCCGTGGTCGAGGTGATGGGCGGGAGGCTCTGG-GCGCCCTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145340 184 - 204313951 GTTGTTAC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAAGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCCCCTGCCGCCGTGGTCGAGGTGATGAGTGGGAGGCTGTGG-GTGCTTTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107554 184 - 16417988 GTTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAAGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCCCCTGCCGCCGTGGTCGAGGTGATAGGCGGGAGGCTGTGG-GTGCTCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207756 184 + 306014 GTTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAAGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCCCCTGCCGCCGTGGTCGAGGTGACGGGCGGGAGGCTGAGG-GTGCTCTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70102 184 + 211231 GCTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTCAAAGGCTCCGACTGGCTGGGGGACCAGGACGCCATCCACTACATGACAGAGCAGGCCCCCGCCGCCGTGGTCGAGGTGATGGGCGGGAGGCTGTGG-GTGCTTTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35694 184 + 2165740 GGTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGAAACATGGAAGAGGACAACTGGAGGTGGCATTTCTATGACACCGTGAAGGGTTCTGACTGGCTGGGGGACCAAGATGCCATCCACTACATGACGGAGCAGGCCCCTGCTGCTGTGGTTGAGGTGATGTGTGGGAAGCTCACG-GGGCCTCC i otoGar3.GL873745 C 0 I 1 s mm10.chr13 46081913 181 - 120421639 GGTATTTC----CAGGGAGGTATCAATGCTGCTCTGGGGAACATGGAAGAGGACAACTGGAGATGGCATTTCTATGACACTGTGAAAGGCTCCGACTGGCTGGGGGATCAGGATGCCATCCATTACATGACAGAGCAAGCTCCTGCCTCTGTGGTTGAGGTAACTGACGGGAAACTCTTGTGTAT---- i mm10.chr13 I 1 C 0 s canFam3.chr34 30169331 172 - 42124431 GCTGTCTCTTTGCAGGGAGGAATCAATGCTGCTCTGGGCAACATGGAGGAGGACAACTGGAGGTGGCACTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGACGCCATCCACTACATGACAGAGCAGGCCCCTGCTTCTGTGGTAGAGGTAGTGTCCACGC----------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543540 162 + 913073 --TGTTTT----CAGGGAGGAATCAATGCCGCGCTGGGGAACATGGAGGAGGACAGCTGGAAGTGGCATTTCTACGACACTGTGAAGGGATCGGATTGGCTGGGAGATCAGGACGCAATCCATTACATGACGGAGCAAGCACCTGCCTCAGTGATCGAGGTGACATAC--------------------- i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=19436.000000 s hg38.chr3_KI270779v1_alt 34293 2 + 205312 GT s panTro5.chr3 200026718 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 8868 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 M 641 s gorGor5.CYUI01015759v1 858633 2 - 880730 GT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198535 2 + 180051392 GT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262983 2 - 181584905 GT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23787 2 - 100774 AT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595306 2 - 91010382 GT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 5 2 - 74206 GT i manLeu1.NW_012101728v1 N 0 C 0 s colAng1.NW_012116910v1 871736 2 + 1687011 GT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145524 2 - 204313951 GT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107738 2 - 16417988 GT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207940 2 + 306014 GT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70286 2 + 211231 GT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35879 2 + 2165740 GA i otoGar3.GL873745 I 1 C 0 s mm10.chr13 46082094 2 - 120421639 GT i mm10.chr13 C 0 C 0 s canFam3.chr34 30169503 2 - 42124431 AT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543702 1 + 913073 -T i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1176905.000000 s hg38.chr3_KI270779v1_alt 34295 186 + 205312 GG--TCTGTTTCCAGT----------ACAAGAGTCCTGG-AAAAAATGTAAGCAGTTGAGGCAGATGTGG-CAGCCGAAAGAA--------------------------------------TGGTGATTAGCAAAGCTCACAAGAGAAGTCTTTGTCCATCATGAACTATGTATTACATGTAATAAGAAAAACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTAATTT s panTro5.chr3 200026720 183 + 202621043 GG--TCTGTTTCTAGT----------ACAAGAGTCCTGG-AAAAAATGTAAGCAATTGAGGCAGATGTGG-CAGCCGAAAGAA--------------------------------------TGGTGATTAGCAAAGCTCACAAGAGAAGTCTTTGTCCGTCATGAAGTATGTATTACATGTAATAAGAAAAACT--T--CTCTTTGATGAAGTGTT---ATTTTCAT------AAAATAGGTTAATTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 858635 187 - 880730 GG--TCTGTTTCTAGT----------ACAAGAGTCCTGGAAAAAAATGTAAGCAATTGAGGCAGATGTGG-CAGCCGAAAGAA--------------------------------------TGGTGATTAGCAAAGCTCACAGGAGAAGACTTTGTCCGTCATGAACTATGTATTACATGTAATAAGAAAAACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTACTTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198537 188 + 180051392 GG--TCTGTTTCTAGT--------CAAAAAGAGTCCTGG-AAAGCATGTAAGCAATTGAGCCAGATGTGGCCGGCCGAAAGAA--------------------------------------TGGTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCGTCACGAACTGTGCATTACACGTAACAAG-AAGACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTACTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180262985 188 - 181584905 GG--TCTGTTTCTAGT--------CAAAAAGAGTCCTGG-AAAGCATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAA--------------------------------------TGGTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCGTCACGAACTGTGCATTACACGTAACAAG-AAGACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTACTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23789 188 - 100774 GG--TCTGTTTCTAGT--------CAAAAAGAGTCCTGG-AAAGCATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAA--------------------------------------TGGTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCGTCACGAACTGTGCATTACACGTAACAAG-AAGACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTACTTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595308 188 - 91010382 GG--CCTGTTTCTAGC--------CAAAAAGAGTACTGG-AAAGAATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAA--------------------------------------TGGTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCATCACGAACTGTGCATTACACGTAACAAG-AAGACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTACTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7 188 - 74206 GG--TCTGTTTCTAGT--------CAAAAAGAGTCCTGG-AAAGCATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAA--------------------------------------TGGTGATGAGCAAAGCTCAGAAGAGGAGTCTTTTTCCGTCACGAACTGTGCATTACACGTAACAAG-AAGACT--T--CTCTTTGATGAAGTGTTGACATTTTCAT------AAAATAGGTTACTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 871738 187 + 1687011 GGTCTCTGTTTCTGGT--------CAAAAAGGGTCCTGG-AAAGGATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAA--------------------------------------GGGTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCATCACGAACTATGCATTACACGTAACAAG-AAGACT--T--CTCTTTGAT---GTGTTAACATTTTCAT------AAAGTAGGTTACTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145526 184 - 204313951 GG--TCTGTTTCGAGT--------ACAAAAGAGTCCTGG-AGAAAATGTAAGAGATTGAGGCAGATGTGGCCAGCCAAAAGAA--------------------------------------CAGTGATGAGTCAAGCTCACAAGAGAA-TCTTTTTCCGTCATGAGCGATGCAGTACATGTAACAGG-AAAA-------CTCTCTGATGAAGGGTTGAGATTTTCAT------AAAATACATGACTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107740 186 - 16417988 GG--TCTGTTTCTAGA--------ACAAAAGAGTCCTGG-AAAAAATGTAAGCGATTGAGGCAGATCTGGCTAGCCGAAAGAA--------------------------------------CGGTGATGAGCGAAGCTCACAAGAGAA--CTTTTTCCATCATGAATGATGCATTACATGTAACAAG-AAAACT--T--CTCTTTGATGAAGGGTTGAGATTTTCAA------AAAATACATGACTTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 207942 172 + 306014 GG--TCTGTTTCTAGT--------ACAAAAGAGTCCTGG-AAAAAATGTAAGAGATTGAGGCAGATATGGCCAGCCCAAAGAA--------------------------------------CGGTGATAAGCAAAGCTCGCAAGAGAA----------------TATGATGCATTACCTGTAACAAG-AAAACT--T--CTCTTCGATGAAGGGTTGAGATTTTCAA------AAAATACATGACTTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70288 186 + 211231 GG--TCTGTTTCTAGT--------ACAAAAGAGTCCTGG-AAAACATGTAAGAGATTGAGGCAGATGTGGCCAGTCGAAAGAA--------------------------------------CGGTGACGAGCGAAGCTCACAAGAGAA-TCTTTTTCCATCGTGAACGACGCAGTACATGTGACAAG-AAAACT-----CTTTTTGATGAAGCGTTGAGATTTTCAT------AAAATACATGACTTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 35881 191 + 2165740 TG--TCTGTTTCTGATATTGAATACAAAAGGAGTCCTAG-AAAAAGTTTAAGAGATTGAGGCAGATATGACTAATTGAAAGAA--------------------------------------TGGTAATGAGCTCAGCTAACAAGAGAAATCTTTTTCTGTCATTAACTATCTCGTACATTTAATAAG-GAAACT--T--TTC-----TGAAATGTCAATATTTTCGT------AGAACATACTACTTT i otoGar3.GL873745 C 0 I 275 s mm10.chr13 46082096 215 - 120421639 GC--TCTGCTTGTATT--------ACAAAAGAATCAGTG-TAAAAATAAAAACGGGCTGGG--GATAAGGCT--CCTGGAGAATGCATGCCTACTGCAATTGAGCTCTAGGGTCCCATCCCTGGTAATGA--TGAGCCAATGAGGAAAGT-TTTTCCTGT----AACTATTCAGTTCATTTAAGAAG-ATAGTT--T--ATTCTCCCGGAATTATCAGTGTTTTCAT------AGAATATGCTAGTAT i mm10.chr13 C 0 I 15 s canFam3.chr34 30169505 169 - 42124431 GG--TCTGTTTCTGAC--------ACAAGAGAGGTTTTG-------------------AGGCAGATGTGGTCAGCCCAAAGAA--------------------------------------GGGT-ATGAGAGGGTGCAACAGGGAGA--CCCTTTCTATTGTCAACCATTCAGTTCATTTAATGAC-AAAGTTTTT--CTCTTTTCTGAAGTGTTGAGATTTTTAT------AGGACATATTGGTTT i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 543703 176 + 913073 -------------------AATTTTTTAAAAAGTCCTAG-ATAAAAATTAAG--GCTGTCCTAGATTTGATCAGGCAAAAAAAATCA----------------------------------TAATGATG--------TAACAAGAAA--TTTTTTTCTAGTGTCA---GTTCAGTTCATTTAACAAG-GAAATC--TTCCTCTCTTCTAAAGTGTCAACATTTTCATGTAAACAGAATATATCAGTTT i dasNov3.JH577625 C 0 I 1 e panPan2.chrUn_NW_014024201v1 8870 641 + 190779 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=227111.000000 s hg38.chr3_KI270779v1_alt 34481 34 + 205312 GGG-TT---TGCAGATTTGTA-TTAAAGTT---GTTTAGTGT s panTro5.chr3 200026903 34 + 202621043 GGG-TT---TGCAGATTTGTA-TTAAAGTT---GTTTAGTGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 858822 35 - 880730 GGGTTT---TGCAGATTTGTA-CTAAGGTT---GTTTAGTGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198725 34 + 180051392 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GTTCAGTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263173 34 - 181584905 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GTTCAGTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 23977 34 - 100774 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GTTCAGTGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595496 34 - 91010382 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GTTCAGTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 195 34 - 74206 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GTTCAGTGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 871925 34 + 1687011 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GTTCAGTGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145710 29 - 204313951 GGG-TT---TGCAGGTTTGTG-TGAAAGCT---GTT-----T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107926 28 - 16417988 GGG-TT---TGCAGATTTGTGTTAAAAGTT---GT------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208114 29 + 306014 GGG-TT---TACAGATTTGTG-TTAAAGTT---GTT-----T i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70474 29 + 211231 GGG-TT---TGCAGATTTGTG-TTAAAGTT---GCT-----T i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46082326 40 - 120421639 GGG-TTTGGTGCAAATTTGGT-ACAAAAATGAGGTTTTTTGT i mm10.chr13 I 15 C 0 s canFam3.chr34 30169675 33 - 42124431 GGG-TT---CGCAGGCTTATG-TTGAAATT---GTT-ACTGT i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 543880 34 + 913073 GGG-TT---TGCAAGTCTGTG-TTAAAGTT---GTTCAGTGT i dasNov3.JH577625 I 1 C 0 e otoGar3.GL873745 36072 275 + 2165740 I e panPan2.chrUn_NW_014024201v1 8870 641 + 190779 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=129605.000000 s hg38.chr3_KI270779v1_alt 34515 20 + 205312 AGATTAGCTGTGAATATCTT s panTro5.chr3 200026937 20 + 202621043 AGATTAGCTGTGAATATCTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 858857 20 - 880730 AGATTAGCTGTGAATATCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198759 20 + 180051392 AGATGAGCTATGAATATCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263207 20 - 181584905 AGATGAGCTATGAATATCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24011 20 - 100774 AGATGAGCTATGAATATCTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595530 20 - 91010382 AGATGAGCTATGAATATCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 229 20 - 74206 AGATGAGCTATGAATATCtt i manLeu1.NW_012101728v1 C 0 M 2258 s colAng1.NW_012116910v1 871959 20 + 1687011 AGGGGAGCTATGAATATCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145739 20 - 204313951 AGGTTAGCTGTGAATATCGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107954 17 - 16417988 ---TTAGCTGTCAATATCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208143 20 + 306014 AGATTAGCTTTGAATATCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70503 20 + 211231 AGGTTAGCTGTGAATATCTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 36347 17 + 2165740 aaaTTAGCCATGAATAT--- i otoGar3.GL873745 I 275 C 0 s mm10.chr13 46082366 17 - 120421639 TTGTTTGTTTTGTTTTT--- i mm10.chr13 C 0 C 0 s canFam3.chr34 30169708 20 - 42124431 AAAGTCGCCATGAAAGTCTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543914 20 + 913073 AAATTAGCCACACATCTCTT i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 8870 641 + 190779 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=403196.000000 s hg38.chr3_KI270779v1_alt 34535 57 + 205312 GACTCCTTTAGGGTAATAAGGCTTTTGTTTGTTTTTATCTTTCACAGGTAGAAAATT s panTro5.chr3 200026957 57 + 202621043 GACTCCTTTAGGGTAATAAGGCTTTTGTTTGTTTTTATCTTTCACAGGTAGAAAATT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01015759v1 858877 57 - 880730 GACTCCTTTAAGGTAATAAGGCTTTTGTTTGGTTTTATCTTTCACAGGTAGAAAAGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 198779 57 + 180051392 GACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263227 57 - 181584905 GACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24031 57 - 100774 GACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAATT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595550 57 - 91010382 GACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAATT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 871979 57 + 1687011 GACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAAGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145759 46 - 204313951 GACTGCTTTAAGGTAATAC-GTTTTTATG----------TTTCACAGCTAGAAAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 107971 56 - 16417988 GACTCCTTTAAGGTAATAT-GTTTTTGTTTGTTTTTGTCTTTCACAGCTAGAAAATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208163 56 + 306014 GACTCCTTTAAGGTAATAC-ATTTTTGTTTGTTTTTATCTTTCACAGCTAGAAAATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70523 56 + 211231 GACTTCTTTAAGGTAATAC-GTTTTTGTTTGTTTTTATCTTTCACAGCTAGAAAATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 36364 52 + 2165740 --CTCCTTTAAGGTAATAA-ATTTTTGTTTTATTTTG--TTTCACAGCTAGAAAATT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46082383 55 - 120421639 TACTTGTTTAAGATAATAT-ATTTTTGCTTG-TTTTGTGTTTCACAGCTAGAAAATT i mm10.chr13 C 0 C 0 s canFam3.chr34 30169728 52 - 42124431 GATTCCTTCCAGGTGCTAG-----GTGTTTGTTTTTGTATTTCACAGCTGGAGAATT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543934 48 + 913073 -GCTCCATTGA-ATAATAG---TTTTGTTTGTTTG----TTTCACAGCTAGAAAACT i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 8870 641 + 190779 M e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1881224.000000 s hg38.chr3_KI270779v1_alt 34592 164 + 205312 ATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACACAGCCTCAAGTTTGGAAAGGGCAGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTTATATGGGAG-GGTAAGGCTG s panTro5.chr3 200027014 164 + 202621043 ATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCAGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTCATATGGGAG-GGTAAGGCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9511 164 + 190779 ATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCAGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTCATATGGGAG-GGTAAGGCCG i panPan2.chrUn_NW_014024201v1 M 641 C 0 s gorGor5.CYUI01015759v1 858934 165 - 880730 ATGGCATGCCGTTTAGCCGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACAGAGCCTCAAGTTTGGAAAGGGTGGGCAGGCCCATCGATGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTGATATGGGAGAGGTAAGGCCG i gorGor5.CYUI01015759v1 C 0 I 1 s rheMac8.chr6 198836 164 + 180051392 ACGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCACTATTGCACACCTTATATGGAAG-GGTAAGGCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263284 164 - 181584905 ACGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCACTATTGCACACCTTATATGGAAG-GGTAAGGCCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24088 164 - 100774 ACGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCACTATTGCACACCTTATATGGAAG-GGTAAGGCCG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595607 164 - 91010382 ACGGCATGCCATTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTATGTGGCTGATCAGACTGGCCCCTCACTATTGCACACCTTATATGGAAG-GGTAAGGCCG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872036 164 + 1687011 ACGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCACTATTGCACACCTTATATGGAAG-GGTAAGACTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145805 164 - 204313951 ATGGCATGCCGTTTAGCAGAACCCAAGATGGGAAGATTTATCAGCGTGCGTTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGCGTGGCTGATCGGACTGGCCACTCGCTACTGCACACCTTATATGGAAG-GGTAAGGCCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108027 164 - 16417988 ATGGCATGCCGTTTAGCAGAACCCAAGATGGGAAGATTTATCAGCGTGCGTTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACAGGCCACTCGCTATTGCACACCTTGTATGGAAG-GGTAAGGCCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208219 164 + 306014 ATGGCATGCCGTTTAGCAGAACCCAAGATGGGAAGATTTATCAGCGTGCGTTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGACCGGACCGGCCACTCGCTACTGCACACCTTGTATGGAAG-GGTGAGGCCG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70579 164 + 211231 ATGGCATGCCGTTTAGCAGAACCCAGGATGGGAAGATTTATCAGCGTGCGTTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGCTGCTGCTGTGTGGCCGATCGGACCGGCCACTCGCTACTGCACACCTTATATGGAAG-GGTAAGGCCG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 36416 164 + 2165740 ATGGTATGCCCTTTAGCAGAACTCAAGATGGGAGGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAATTTGGAAAAGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACTGGGCACTCACTGTTGCACACCTTGTATGGAAG-GGTAAGGCCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46082438 164 - 120421639 ATGGTATGCCATTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGGAAAGGCGGGCAGGCTCATCGGTGTTGCTGTGTGGCTGATCGGACAGGCCACTCACTCTTACACACGTTGTATGGAAG-AGTAAGGCTG i mm10.chr13 C 0 I 440 s canFam3.chr34 30169780 164 - 42124431 ATGGCATGCCATTTAGCAGAACTGAAGATGGAAGGATCTATCAGCGTGCTTTTGGTGGACAGAGCCTCAAGTTTGGGAAAGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGACCGCACTGGCCACTCGCTGCTGCACACGTTGTATGGAAG-GGTGAGGCCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 543982 164 + 913073 TTGGCATGCCATTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGAGCGTTTGGTGGGCAGAGCCTCAAGTTTGGGAAAGGAGGGCAGGCCCATCGGTGCTGTTGCGTGGCTGACCGGACTGGCCACTCCCTGTTACACACCCTGTATGGAAG-GGTGAGGCGG i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=473161.000000 s hg38.chr3_KI270779v1_alt 34756 96 + 205312 CCCCCCGTCCACCTGA-GACAGGACACATAGTGCTGGGGCTTGTGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTGCGT s panTro5.chr3 200027178 96 + 202621043 CCCTACGTCCACCTGA-GACAGGACACGTAGTGCTGGGGCTTGTGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTGCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9675 96 + 190779 CCCTACGTCCACCTGA-GACAGGACACGTAGTGCTGGGGCTTGTGGTGACAGCGAGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTGCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 859100 96 - 880730 CCCCCCGTCCACCTGA-GACAGGACACGTAGTGCTGGGGCTTATGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTACGC i gorGor5.CYUI01015759v1 I 1 C 0 s rheMac8.chr6 199000 96 + 180051392 CCCCTGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGGTTATGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCCGCCAGAGATTATGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263448 96 - 181584905 CCCCCGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCCGCCAGAGATTATGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24252 96 - 100774 CCCCCGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGTGGGGAATGGGTTAACGTGCCCAGTGAGTCCGCCAGAGATTATGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595771 96 - 91010382 CCCCCGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCCGCCAGAGATTATGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872200 88 + 1687011 CCCC-GGTCCA-CTGA-GACAGGACATGTAGTGCTGGGGCTTACGGTGACAGTGGG--ATGGGTTA----GCCCAGTGAGCCCGCCAGAGATGATGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 145969 96 - 204313951 CCTCCAGTGCATCTGA-GATAGGACCCGTAGTGCCAGGGCTTATGGTGACAACGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTATGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108191 95 - 16417988 CCTCCACTGCACCTGA-GACAGGACCCGTAGTGCTGGGGCTTATGGTGACAATGGGGAATGGGTTAGTGTGCCCAGTGAGTCGG-CAAAGATTATGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208383 96 + 306014 CCTCCACTGCACCTGA-GACAGGACCCGTAGTGCTGGGGCTTATGGTGACAATGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTATGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70743 95 + 211231 CCTCCAGCGCACCTGA-GACAGGGCGCATAGTGCTGGGGCTTATGGTGGCGACGGGGAA-GGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTATGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 36580 15 + 2165740 TTTC-----------------GGATGCATATC----------------------------------------------------------------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30169944 63 - 42124431 CCCTGGGTGCACAGGGTGACAGGACACAC------------TCTGGTTAGGACAGG-------------CGCGCGGTGA-TAAGTTGGA-------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 544146 49 + 913073 -------------------------------CGTTGGTGC--ATGTTCATGATGGGG---------------CCCGTGGGCCCGACTCAGGAAGTGT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46082602 440 - 120421639 I e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1160087.000000 s hg38.chr3_KI270779v1_alt 34852 195 + 205312 AAAAAGCAACAGAGAACAGCCGTGTGGGGCACATGCAGCGACTGTGGATGTGACAGGAGCAGGC----GT----GTGCCTTGAGAAGCTGCC-CCTAAGGCAATGTGTGAGTTGTTGCCTCTATGTTGGGAAGTTGAATTGATAATC-TTATATACCAGGTTTTC-ACTTGGGATATGTGACACTCAGCATG-TAAGAACAGAGCAA s panTro5.chr3 200027274 195 + 202621043 AAAAGGCAACAGAGAACAGCCGTGTGGGGCACATGCAGCGACTGTGGATGTGACAGGAGCAGAC----AT----GTGCCTTGAGAAGCTGCC-CCTAAGGCAATGTGTGAGTTGCTGCCTCTATGTTGGAAAGTTGAATTGATAATC-TTATATACCAGGTTTTC-ACTTGGGATATGTGACACTCAGCATG-TAAGAACAGAGCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9771 199 + 190779 AAAAGGCAACAGAGAACAGCCGTGTGGGGCACATGCAGCGACTGTGGATGTGACAGGACCTATCCCCTGT----GTGCCTTGAGAAGCTGCC-CCTAAGGCAATGTGTGAGTTGCTGCCTCTATGTTGGAAAGTTGAATTGATAATC-TTATATACCAGGTTTTC-ACTTGGGATATGTGACACTCAGCATG-TAAGAACAGAGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 859196 194 - 880730 AAAAAGCAACAGAGAACAGCGGTGTGGGGCACATGCAGCGACTGTGGATGTGACAGGAGCAGAC----GT----GTGCCTTGAGAAGCTGCC-CCTAAGGCAATGTGTGAGTTGTTGCCTCTATGTTGGAAAGTTGAATTGATAATC-TTATATA-CAGGTTTTC-ACTTGGCGTATGTGACACTCAGCATG-TAAGAACAGAACAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199096 196 + 180051392 AAAAAGCAACAGAGAACAACGGTGTAGGACACATGCAGCGACTGTTGATGTGAAAGGACCAGGC----AT----GTGCTGTGAGAAGCTGTC-CCTAAGGCAATATGTTATTTCTTGTATCTATTTTGGAAAGTTGAATTGATAATC-TTATATACCAGATTTTTAACTTGGGGTATGTGACACTCAACATG-TCAGAACCGAGCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263544 196 - 181584905 AAAAAGCAACAGAGAACAACGGTGTAGGACACATGCAGCGACTGTTGATGTGAAAGGACCAGGC----AT----GTGCTGTGAGAAGCTGTC-CCTAAGGCAATATGTTATTTCTTGTATCTATTTTGGAAAGTTGAATTGATAATC-TTATATACCAGATTTTTAACTTGGGGTATGTGACACTCAACATG-TCAGAACCGAGCAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24348 196 - 100774 AAAAAGCAACAGAGAACAACGGTGTAGGACACATGCAGCGACTGTTGATGTGAAAGGACCAGGC----AT----GTGCTGTAAGAAGCTGTC-CCTAAGGCAATATGTTATTTCTTGTATCTATTTTGGAAAGTTGAATTGATAATC-TTATATACCAGATTTTTAACTTGGGGTATGTGACACTCAACATG-TCAGAACCGAGCAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89595867 193 - 91010382 AAAAAGCAACAGAGAACAACGGTGTAGG--ACATGCAGCGACTGTTGATGTGAAAGGACCAGGC----AT----GTGCTGTGAGAAGCTGTC-CCTAAGGCAATATGTTATTTCTT-TATCTATTTTGGAAAGTTGAATTGATAATC-TTATATGCTAGGTTTTTAACTTGGGATATGTGATGCTCAAAATA-TTAGAACAGAGCAA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872288 193 + 1687011 AAAAAGCAAC--AGAACAACGGTGTAGGACACATGCAGCGACTGTCGATGTGGAAGGACCAGGC----AC----GTGCTGTGAGAAGCTGTC-CCTAAGGCAACATGTTATTTCTTGTATCCA-TTTGGAAAGTTGAACTGATAATC-TTATATACCAGGTTTTTAACGTGGGGTATGTGATACTCAAAATA-TAAGAACAGAGCAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146065 189 - 204313951 AAAAAGCAACAGAGAACAACTGTGTAAGACATGCGC-GGGGTTATTGATGTGAGAGTACCAGGC----------GTGCTGTCAGGAGCTGTC-CCTAAGGCAATACGTTATTTCTTGTATCTGTTTTGGAAAGTTGAATTGATAATC-TTATATACCAGGTTCTA-ACTTGGAATATGTGACATTCAGCAT----AGGACAGAACAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108286 190 - 16417988 AAAAAGCAACAGAGAACAACTGTGTAAGACATGTGCAGGGATTGTTGATGTGAAAGCACCAGGC----------GTGCTGTGGGAAGCTGTC-CCTAAGGCAATATGTAATTTCTTGTATCTATTTTGGAAAGTTGAATTGATAATC-TTACGTACCAGGTTCTA-ACCTGGGATATGTGACATTCAGCAT----AGAACAGAACAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208479 190 + 306014 AAAAAGCAACAGAGAACAACTGTGTAAGACGTGTGCAGGGACTATTGATGTGAAAGCACCAGGC----------GTGCTGTGAGAAGCTGTT-CCTAAGGCAATATGTAATTTCTTGTATCTATTTTGGAAAGTTGAATTGATAATC-TTATATACCAGGTTCTA-ACTTGGGATATGTGACACTCAGCAT----AGAACAGAACAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 70838 190 + 211231 AAAAAGCAACAGAGAACGACTGTGTAGGACATGTGCAGGGACTGTGGATGTGAGAGCACCAGGC----------GTGCTGTGAGAAGCTGTC-CCTGAGGCAATATGTTACTTCTTGTATCTCTTTTGGAAAGTTGAATTGATGATC-TTATCTACCGGGTTCTA-ACTTGGGACCTGTGACATTCGGCGT----GGAACAGAACAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 36595 145 + 2165740 --AAAGTATTAAAGAG----------------------------------------------------------ATGCTGTGAATAACTCTCTCTTAAGGCGATATGTTTATTCTTGGTTCTATTTTGGAAAGTTGAATTGATAGTCATTAAATGCCGGGTTTGA-GGTTGGGATCTGTCACACTCAAGATG-AAAGAACAGAGCAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46083042 182 - 120421639 aaaaattaacacaGAT------AGTAAGATACCTGAAATAATTATTAATCTGAAAGTATTGAAC----AC----ATATTGTGA-AAGCTGTC-TCTAAGTCAGTATGTTACTCCTTATGTCTGTATTGGAAAGTTGAGTTGGTAATCATTTCTTACT---------ATTTTGAATTTGTGCTGCATAACATGCCAAGAACAGAGAAA i mm10.chr13 I 440 C 0 s canFam3.chr34 30170007 182 - 42124431 AACAGGCCACCCTG-----------GGGACAGGTCAA---AATGTCAATGTGTCCGCCTCTGGG----GTCACAGTAACTTGGTAAGATGTG-TGT-AGTCATTATGAATTTAGAAGTGCCTATTTTAGAAAATTAAATTGATAATC-GT-TATACCGTGTTTGG-ACG-GTGATCTGCTGCACTGCAAGTG-TAAGAACAGAAAAA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 544195 145 + 913073 ----------------------------------ACCTTAATTATTAATATGA---------------------GTG-----AAAAGCTGTC-TTAAAAGCAGCATTTTGTTTCTTTTATCCATTTTGGAAAATTAGATTGATATTCATTATGTAGCATGTTTGAATCTTACGATTAGTCATACTGAAAGTA-TAAGATGAGAGCAA i dasNov3.JH577625 C 0 I 14 e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=12000.000000 s hg38.chr3_KI270779v1_alt 35047 1 + 205312 G s panTro5.chr3 200027469 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9970 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 859390 1 - 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199292 1 + 180051392 G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263740 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24544 1 - 100774 G i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596060 1 - 91010382 G i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872481 1 + 1687011 G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146254 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108476 1 - 16417988 G i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208669 1 + 306014 G i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71028 1 + 211231 G i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 36740 1 + 2165740 G i otoGar3.GL873745 C 0 I 43 s mm10.chr13 46083224 1 - 120421639 G i mm10.chr13 C 0 C 0 s canFam3.chr34 30170189 1 - 42124431 G i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 544340 14 + 913073 I e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=5757.000000 s hg38.chr3_KI270779v1_alt 35048 1 + 205312 C s panTro5.chr3 200027470 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9971 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 859391 1 - 880730 C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199293 1 + 180051392 C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263741 1 - 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24545 1 - 100774 C i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596061 1 - 91010382 C i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872482 1 + 1687011 C i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146255 1 - 204313951 C i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108477 1 - 16417988 C i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208670 1 + 306014 C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71029 1 + 211231 C i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46083225 1 - 120421639 T i mm10.chr13 C 0 C 0 s canFam3.chr34 30170190 1 - 42124431 T i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e dasNov3.JH577625 544340 14 + 913073 I e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=8281.000000 s hg38.chr3_KI270779v1_alt 35049 1 + 205312 A s panTro5.chr3 200027471 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9972 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 859392 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199294 1 + 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263742 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24546 1 - 100774 A i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596062 1 - 91010382 A i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872483 1 + 1687011 A i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146256 1 - 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108478 1 - 16417988 A i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208671 1 + 306014 A i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71030 1 + 211231 A i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46083226 1 - 120421639 A i mm10.chr13 C 0 I 216 e otoGar3.GL873745 36741 43 + 2165740 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=15600.000000 s hg38.chr3_KI270779v1_alt 35050 2 + 205312 gg s panTro5.chr3 200027472 2 + 202621043 gg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 9973 2 + 190779 gg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 859393 2 - 880730 gg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199295 2 + 180051392 GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263743 2 - 181584905 GG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24547 2 - 100774 GG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596063 2 - 91010382 gg i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872484 2 + 1687011 gg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146257 2 - 204313951 GG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108479 2 - 16417988 GG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208672 2 + 306014 GG i cebCap1.NW_016108150v1 C 0 I 68 s aotNan1.NW_018494784v1 71031 2 + 211231 GG i aotNan1.NW_018494784v1 C 0 I 68 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083227 216 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=471196.000000 s hg38.chr3_KI270779v1_alt 35052 177 + 205312 ccaggcacagtggcccacgtctgtaatcccagcactttaggaggccaaggcaggaggatcacttgagaccagaagtttgagaccagtctggagaacatagtgagaccctgtctctacagaaagtttaaaaagtagctgagcatggtggtacatgcttgtaatcccagttactcagga s panTro5.chr3 200027474 177 + 202621043 ccaggcacagtggcccacgtctgtaatcccagcactttaggaggccaaggcaggaggatcacttgataccagaagtttgagaccagtctggagaacatagcgagaccctgtctctacaaaaagtttaaaaagtagctgagcatggtggtacatgcttgtaattccagttactcagga i panTro5.chr3 C 0 I 20 s panPan2.chrUn_NW_014024201v1 9975 177 + 190779 ccaggcacagtggcccacgtctgtaatcccagcactttaggaggccaaggcaggaggatcacttgataccagaagtttgagaccagtctggagaacatagcgagaccctgtctctacaaaaagtttaaaaagtagctgagcatggtggtacatgcttgtaattccagttactcagga i panPan2.chrUn_NW_014024201v1 C 0 I 20 s gorGor5.CYUI01015759v1 859395 177 - 880730 ccaggcacagtggcccatgtctgtaatcccagcactttaggaggccaaggcaggaggatcacttgagaccagaagtttgagaccagtctggagaacatagcgagaccctgtctctacaaaaagtttaaaaagtagctgagcatggtggtacatgcttgtaatcccagttactcagga i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199297 144 + 180051392 CCAGGCACAG----------------------------Aggaggccaagg-aggaggatcacttgagaccagaagtttgagaccagcctggacaacatagcgagaccctgtctctacaaaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagtt----agga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180263745 144 - 181584905 CCAGGCACAG----------------------------Aggaggccaagg-aggaggatcacttgagaccagaagtttgagaccagcctggacaacatagcaagaccctgtctctacaaaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagtt----agga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 24549 144 - 100774 CCAGGCACAG----------------------------Aggaggccaagg-aggaggatcacttgagaccagaagtttgagaccagcctggacaacatagcgagaccctgtctctacaaaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagtt----agga i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596065 177 - 91010382 ccaggcacagtggctcacatctgtaatcccagcactttaggaggccacggcaggaggatcacttgagaccagaggtttgagaccagcctggacaatatagagagaccctgtctctacagaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagttactcagga i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872486 177 + 1687011 ccaggcacagtggctcacatctgtaatcccagcactttaggaggccaaggcaggaggatcacttgagaccagaggtttgagaccagcctggacaacatagcgagaccctgtctctacaaaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagttactcagga i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083227 216 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=155304.000000 s hg38.chr3_KI270779v1_alt 35229 89 + 205312 ggctgaggcaggaggatcacttgag-------------------acagtgagccatgttcataccactgcactccagcctgagcaacaggaga-cctgtctcaaaaaaa s gorGor5.CYUI01015759v1 859572 89 - 880730 ggctgaggcaggaggatcacttgag-------------------acagtgagccatgttcataccactgcactccagcctgggcaacaggaga-cctgtctcaaaaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199441 107 + 180051392 ggctgaggtgggaggatcacttgagaccagga--ggttgaggctacaatgagccatgttcataccactgcactccagcctgggcaacaggagaccctgtctcaaaaaaa i rheMac8.chr6 C 0 I 207 s macFas5.chr6 180263889 107 - 181584905 ggctgaggtgggaggatcacttgagaccagga--ggttgaggctacaatgagccatgttcataccactgcactccagcctgggcaacaggagaccctgtctcaaaaaaa i macFas5.chr6 C 0 I 311 s macNem1.NW_012013899v1 24693 107 - 100774 ggctgaggtgggaggatcacttgagaccagga--ggttgaggctacaatgagccatgttcatagcactgcactccagcctgggcaacaggagaccctgtctcaaaaaaa i macNem1.NW_012013899v1 C 0 I 324 s chlSab2.chr4 89596242 105 - 91010382 ggctgaggcaggaggatcacttgagaccaggatcacttgaa---acagtgagccatgttcataccactgcactccagcctgggcaacaggaga-cctgtctcaaaaaaa i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872663 101 + 1687011 ggctgaggcaggaggatcacttgagaccaggatcacttgagac-------agccatgttcataccactgcactccagcctgggcaacaggaga-cctgtctcaaaaaat i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083227 216 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1599.000000 s hg38.chr3_KI270779v1_alt 35318 3 + 205312 gac s gorGor5.CYUI01015759v1 859661 3 - 880730 gac i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264307 3 - 181584905 gaa i macFas5.chr6 I 311 C 0 s chlSab2.chr4 89596347 3 - 91010382 gaa i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872764 3 + 1687011 gaa i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083227 216 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 24800 324 - 100774 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=-5003.000000 s hg38.chr3_KI270779v1_alt 35321 7 + 205312 aaagaa-c- s gorGor5.CYUI01015759v1 859664 7 - 880730 aaaCAG-C- i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264310 7 - 181584905 aaagaaa-- i macFas5.chr6 C 0 I 2 s chlSab2.chr4 89596350 6 - 91010382 aaagaa--- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 872767 2 + 1687011 aa------- i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 46083443 7 - 120421639 aaagag--c i mm10.chr13 I 216 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 24800 324 - 100774 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e manLeu1.NW_012101728v1 249 2258 - 74206 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=3917.000000 s hg38.chr3_KI270779v1_alt 35328 4 + 205312 ---aaGT s gorGor5.CYUI01015759v1 859671 4 - 880730 ---AAGT i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264319 4 - 181584905 ---aaGC i macFas5.chr6 I 2 C 0 s macNem1.NW_012013899v1 25124 4 - 100774 ---aaGC i macNem1.NW_012013899v1 I 324 C 0 s chlSab2.chr4 89596356 2 - 91010382 -----GT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2587 4 - 74206 ---aaGC i manLeu1.NW_012101728v1 M 2258 C 0 s colAng1.NW_012116910v1 872769 4 + 1687011 ---aaGT i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 46083450 7 - 120421639 actaagt i mm10.chr13 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170191 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=108110.000000 s hg38.chr3_KI270779v1_alt 35332 45 + 205312 ATTTTAAGGCTCTTTTACC--ACC-TCTGAGTTCCTGAATGGATTGGT s gorGor5.CYUI01015759v1 859675 46 - 880730 ATTTTAAGGCTCTTTTACC--ACCGTCTGAGTTCCTGAATGGATTGGT i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264323 47 - 181584905 ATTTTAAGGCTCTTTTACCAAACC-TCTGAGTTCCTGAATGGATTGgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25128 45 - 100774 ATTTTAAGGCTCTTTTACC--ACC-TCTGAGTTCCTGAATGGATTGgt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596358 45 - 91010382 ATTTTAAGGCTGTTTTACC--ACC-TCTGAGTTCCTGAATGGGTTGgt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2591 45 - 74206 ATTTTAAGGCTCTTTTACC--ACC-TCTGAGTTCCTGAATGGATTGgt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 872773 45 + 1687011 ATTTTAAGGCTGTTTTACC--ACC-TCTGAGTTCCTGAATGGGTTGgt i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 46083457 44 - 120421639 ATATTAATGTGCTTTTATC--ACC-TCTAAGTTACTGAACTGATTGA- i mm10.chr13 C 0 C 0 s canFam3.chr34 30170191 41 - 42124431 ATTTTATGACTC----AGT--ACC-TCTGAGTTCCTGAACTGATTGAT i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e dasNov3.JH577625 544340 14 + 913073 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=21109.000000 s hg38.chr3_KI270779v1_alt 35377 12 + 205312 TTGGtttg-----tttg s gorGor5.CYUI01015759v1 859721 14 - 880730 TTTGtttgt---ttttg i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264370 17 - 181584905 tttgtttgtttgttttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25173 17 - 100774 tttgtttgtttgttttg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596403 17 - 91010382 tttgtttgtttgttttg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2636 17 - 74206 tttgtttgtttgttttg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 872818 13 + 1687011 ----tttgtttgttttg i colAng1.NW_012116910v1 C 0 C 0 s mm10.chr13 46083501 13 - 120421639 ----TGTATTTATCTTG i mm10.chr13 C 0 I 240 e otoGar3.GL873745 36741 43 + 2165740 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170232 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=231021.000000 s hg38.chr3_KI270779v1_alt 35389 139 + 205312 ttttgt-----tttgctttgtttttgagacgga--gtctcact-c--tcacccaggctggagtgcagtggcgcgatctctgctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctccagagtagctgggact s gorGor5.CYUI01015759v1 859735 140 - 880730 ttttgt-----tttgctttgtttttcagacgga--gtctcact-ctgtcacccaggctggagtgcagtggcgcgatctctgctcactgcaacctctgcct-ccgggttcaagcgattctcctgcctcagcctccagagtagctgggact i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264387 145 - 181584905 ttttgttttgctttgctttgtttttgagacgga--ctctcact-ctgtcac-caggctggagtgcagtggtgcaatctctgctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggact i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25190 147 - 100774 ttttgttttgctttgctttgtttttgagacggactctctcact-ctgtcac-caggctggagtgcagtggtgcaatctctgctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggact i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596420 142 - 91010382 ttttgt-----tttgctttgtttttgagacgga--gtctcactcttgtcacgcaggctggagtgcaatggcgcaatctctgctcactgcaacctcagccacctaggttcaagcgattctcctgcctcagcctcctgagtagctgggact i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2653 145 - 74206 ttttgttttgctttgctttgtttttgagacgga--gtctcact-gtgtcac-caggctggagtgcagtggtgcaatctctgctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggact i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 872831 142 + 1687011 ttttgt-----tttgctttgtttttgagatgga--gtgtcactcttgtcatgcaggctggagtgcaatggcgcaatctctgctcactgcaacctcagccacctgggttcaagcaattctcctgcctcagcctcctgagtagctgggaCT i colAng1.NW_012116910v1 C 0 M 4505 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083514 240 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170232 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=106411.000000 s hg38.chr3_KI270779v1_alt 35528 84 + 205312 acaggtgcacgccg-ccacgccttgctgatgttttgtattttagtagagacagggtttcccatgttgcccaggctgctcccgaac s gorGor5.CYUI01015759v1 859875 85 - 880730 acaggtgcacgccacccacgccttgctgattttttgtattttagtagagacagggtttcccatgttgcccaggctgctcccgaac i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180264532 84 - 181584905 ataagtgcacgcca-ccatgcctggctaattttttgtattttagtagagacagagtttcccatgttgcccaggctggtcccgaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25337 84 - 100774 aaaagtgcacgcca-ccatgcctggctaattttttgtattttagtagagacagggtttcccatgttgcccaggctggtcccgaac i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596562 84 - 91010382 acaggtgcacgcca-ccatgcctggctaattttttgtattttagtagagacagggtttcccatgttgcccaggctggtcccgaac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2798 84 - 74206 ataagtgcacgcca-ccatgcctggcaaattttttgtattttagtagagacagggtttcccatgttgcccaggctggtcccgaac i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083514 240 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170232 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e rheMac8.chr6 199548 207 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=144953.000000 s hg38.chr3_KI270779v1_alt 35612 79 + 205312 tcctgagctcaggcagtccacctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccacacccggccATG s gorGor5.CYUI01015759v1 859960 79 - 880730 tcctgagctcaggcagtccacccgcctcggcctcctaaagtgctgggattacaggcgtgagccaccacacccggccATG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199755 79 + 180051392 tcctgagctcaggcagtctacccgcctcggcctcccaaagtgcgaggattagaggtgtgagccaccacacccagccATG i rheMac8.chr6 I 207 C 0 s macFas5.chr6 180264616 79 - 181584905 tcctgagctcaggcagtctacccgcctcggcctcccaaagtgcgaggattagaggtgtgagccaccacacccagccATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25421 79 - 100774 tcctgagctcaggcagtctacccgcctcggcctcccaaagtgcgaggattagaggtgtgagccaccacacccagccATG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596646 79 - 91010382 tcctgagctcaggcagtccacccgcctcagcctcccaaagtgcggggattagaggcatgagccaccacccccagccATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2882 79 - 74206 tcctgagctcaggcagtctaccggcctcggcctcccaaagtgcgaggattagaggtgtgagccaccacacccagccATG i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 36741 43 + 2165740 I e mm10.chr13 46083514 240 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170232 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=5348.000000 s hg38.chr3_KI270779v1_alt 35691 2 + 205312 GA s gorGor5.CYUI01015759v1 860039 2 - 880730 GA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199834 2 + 180051392 GA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180264695 2 - 181584905 GA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25500 2 - 100774 GA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596725 2 - 91010382 GA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2961 2 - 74206 GA i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 36784 2 + 2165740 GA i otoGar3.GL873745 I 43 C 0 e mm10.chr13 46083514 240 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e canFam3.chr34 30170232 0 - 42124431 C e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=20909.000000 s hg38.chr3_KI270779v1_alt 35693 11 + 205312 TTGTTTTCA-T-A s gorGor5.CYUI01015759v1 860041 11 - 880730 TTGTTTTAA-T-A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199836 11 + 180051392 TTGTTTTAA-T-A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180264697 11 - 181584905 TTGTTTTAA-T-A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25502 11 - 100774 TTGTTTTAA-T-T i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596727 11 - 91010382 TTGTTTTAA-T-A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2963 11 - 74206 TTGTTTTAA-T-T i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 36786 12 + 2165740 TTATCTTGATT-A i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30170232 12 - 42124431 TTGTTTTAA-TCC i canFam3.chr34 C 0 C 0 e mm10.chr13 46083514 240 - 120421639 I e dasNov3.JH577625 544340 14 + 913073 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=254532.000000 s hg38.chr3_KI270779v1_alt 35704 105 + 205312 TTAACTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAGGGTCAACTTTGGCATGACCAAACAA--------------------------------TATCCTGAACAGTATTGATTCAGAG s gorGor5.CYUI01015759v1 860052 105 - 880730 TTAACTGTTACCACCGGACAAAGACTTGAGGTGACAGTAGTTACTGTGTAATCAGGGTCCGCTTTGGCATGAGCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199847 105 + 180051392 TTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGGCCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180264708 105 - 181584905 TTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGGCCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25513 105 - 100774 TTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGGCCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596738 137 - 91010382 TTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGACCAAATAATATTCTGAACAGTATTGATTCAGagcattcagtattctgaacagtattgattcagag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 2974 105 - 74206 TTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGGCCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 36798 104 + 2165740 TTAACTATTAAAACCAGACAGAGACTTGAAA-GACAGTAATCGCTGGATGATCAGAACCAATTTTAGCATGGACAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30170244 76 - 42124431 TTAACTGTTTAGACTGGACTAACACTTGGGG-GACAGTACTTACTGGATACTCAGGGCCTACTTTGGCGTAGCCAAA------------------------------------------------------------ i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 544354 71 + 913073 TTAGCTTTTAAAACTGGAATAGGTCTTGTGG-AGCAGTCGTCACTGGGCAATCA--GCCAACTTTGGCGTGGAT--------------------------------------------------------------- i dasNov3.JH577625 I 14 C 0 e mm10.chr13 46083514 240 - 120421639 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=477044.000000 s hg38.chr3_KI270779v1_alt 35809 201 + 205312 TAATCCATGTTCTGAGCTTTGTTGTTTTCTGATGCATGGGGACGGATCAGTAATGTGCAGGTTGTTAGAACACCAGTGACT--TCTCTGTGGC-TGAGTGCATCGACAAGTGTGTGGTGGGAGGAGACGGCGGCTCCTTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGG-CCCAG--GCTCACGAGAGCGACTTGCGCTGGCTGA-G s gorGor5.CYUI01015759v1 860157 202 - 880730 TAATCAATGTTCTGAACTTTGTTGTTTTCTGATGAATGGGGACGGATCATTAATTTGCAGGTTGTTAGAACACCAGTGACT--TCTCTGTGGC-TGAGTGCATCGACAAGTGTGTGGTGGGAGGAGACAGCGGCTCCGTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGGCCCCAG--GCTCATGAGAGCAACTTGCGCTGGCTGA-G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 199952 201 + 180051392 TATTCAGTATTCTGAACTTTGTTGTTTTCTGATGAATAGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCT--TCTCTGTGGC-TGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGG-CCCAG--GCTTACGAGGGCAACTTGCACTGGCTGA-G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180264813 201 - 181584905 TATTCAGTATTCTGAACTTTGTTGTTTTCTGATGAATAGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCT--TCTCTGTGGC-TGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGG-CCCAG--GCTTACGAGGGCAACTTGCACTGGCTGA-G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25618 201 - 100774 TATTCAGTATTCTGAACTTTGTTGTTTTCTGATGAATAGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCT--TCTCTGTGGC-TGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGG-CCCAG--GCTTACGAGGGCAACTTGCACTGGCTGA-G i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89596875 201 - 91010382 tattcagtattcTGAACTTTGTTGTTTTCTGATGAATGGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCT--TCTCTGTGGC-TGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCTGGAGCAGGAGCTGTCATGTGGGGAACTGG-CCCAG--GCTTACGAGGGCAACTCGCACTGGCTGA-G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3079 201 - 74206 TATTCAGTATTCTGAACTTTGTTGTTTTCTGATGAATGGAGATAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCT--TCTCTGTGGC-TGAGTACATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGG-CCCAG--GCTAACGAGGGCAACTCGCACTGGCTGA-G i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 36902 179 + 2165740 TAATCAATATTCTGAACTCTGTTGTTTTCAGAT-AATGGGGGCAGATCATTAATTTGCAAG-TGTTAGGATGTCAATGCCT--T------------AGTGTCTTGCTAAATGTCTTAAGGGACCTG---------TCATCCGTCACAGGAGCTGTCATATGGGAAGTTGG--CCAG--GCTTATGAGAGCCACTTGCATTGGCCCAGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46083754 181 - 120421639 TAATCAATAATCTGAGCTC---TGTCTTCAGAAG-GTAGTGACAGCTGGTTAACATGAAAA-TATTAGAGCACCAGTAGGT--TCCTTTAGGC-TGAGTACACTGAAAAAAATATGACAGTCTGTG-------CTTATTCTGTG---------GTTGTGTTGAGAGTTTG-CCTAT--GCTCTTTAGAGTTCCTTGTATTAACCATCA i mm10.chr13 I 240 C 0 s canFam3.chr34 30170320 172 - 42124431 TAATCAGTATTCTGAACTC--TTGATTTCC---------------ATTATTGATTAGCGAA-TGTTAGGACAGGAGTCGCT--TCTCT--GGC-TGCGTGCATCGACAGATATGTGACAGGATCTG-------CCCACCCTGTGGAATTGTGTGTCACATGGGGAGCTGG---CAG--TTTCATGAGGGTCCTTTGTGTTCACTGA-G i canFam3.chr34 C 0 I 151 s dasNov3.JH577625 544425 189 + 913073 --GTTACTATTCT-AACTC--TCGTTTTCCAATAAATGGGTGCATTTCCTTAATTTACAAG-TGTCAGGATGCCCGTGACTGGCTTCCGTGCCAGGAGTGCTTTGACAGGTGTGTGCCAGGAC----------CTGCCTCCAGGGAGGTTGTGTGCATGTGTGGAACTGG-CCCAGCACCCCAGGAAAGGCCCTTG-GCTAAAAGA-G i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=102518.000000 s hg38.chr3_KI270779v1_alt 36010 50 + 205312 GGAACGGCAGGTCCAGG-CGGG-cagcgctgtccggcg-cctacctttctgcg s gorGor5.CYUI01015759v1 860359 51 - 880730 GGAACGGCAGGTCCAGG-AGGG-cagcgctgtccggcgccctacctttctgca i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200153 50 + 180051392 GGAACAGCAGGTCCAGG-CGGG-cagcgctgtccagtg-cctacctttctgca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265014 50 - 181584905 GGAACAGCAGGTCCAGG-CGGG-cagcgctgtccagtg-cctacctttctgca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25819 50 - 100774 GGAACAGCAGGTCCAGG-CGGG-cagcgatgtccagtg-cctacctttctgca i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89597076 50 - 91010382 GGAACAGCAGGTCCAGG-CGGG-cagcgctgtccagtg-cctacctttctgca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3280 50 - 74206 GGAACAGCAGGTCCAGG-CGGG-cagcgctgtccagtg-cctacctttctgca i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 37081 47 + 2165740 GGAGCTACAGAGCCTGGTCTTG-TGATGTTGTCTAGTG-CTGGtctgtg---- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46083935 51 - 120421639 GGACTATCAAATCCACCCCTGG-TAGCATTGTCCAGTG-CTGACTCTACTATG i mm10.chr13 C 0 I 1 s dasNov3.JH577625 544614 37 + 913073 GGCCCGTCAGACCCAGT-CTGACCAGCACTATCCAGTG--------------- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30170492 151 - 42124431 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e colAng1.NW_012116910v1 872973 4505 + 1687011 M e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=148868.000000 s hg38.chr3_KI270779v1_alt 36060 60 + 205312 g--tgcc-ggaatctgctcgtctgcaaccgtccgctttggtagctg--ccagccacatggggctg s gorGor5.CYUI01015759v1 860410 62 - 880730 ggttgcc-ggaatctgctcgtctgcaaccgtctgctttggtagctg--ccagccacatggggctg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200203 60 + 180051392 --gtgct-ggaatctgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265064 60 - 181584905 --gtgct-ggaatctgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25869 60 - 100774 --gtgct-ggaatctgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89597126 60 - 91010382 --gtgct-ggaatctgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3330 60 - 74206 --gtgct-ggaatccgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877479 60 + 1687011 --GTGCT-GGAATCTGCTTGTCTGCAACCATCCGCATTgggaactg--ccagccacatgtggctg i colAng1.NW_012116910v1 M 4505 C 0 s otoGar3.GL873745 37128 60 + 2165740 --gtggtagaaaggtgcttatttgc-actgtccactttgatagcca--gcagccacatggcacta i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46083987 61 - 120421639 --GTATG-GAAATAGGCTTATCAGC-ACTGCCTACTACAGCCCCAAGTCTGGCCATACTGGGGTG i mm10.chr13 I 1 C 0 s dasNov3.JH577625 544651 26 + 913073 -------------------------------------TGGCAGCTG--TCTGCCCCACATGGCTA i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30170492 151 - 42124431 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e cerAty1.NW_012004452v1 181462 3065 + 218577 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=15510.000000 s hg38.chr3_KI270779v1_alt 36120 3 + 205312 ttg s gorGor5.CYUI01015759v1 860472 3 - 880730 ttg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200263 3 + 180051392 ttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265124 3 - 181584905 ttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25929 3 - 100774 ttg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184527 3 + 218577 TTG i cerAty1.NW_012004452v1 M 3065 C 0 s chlSab2.chr4 89597186 3 - 91010382 ttg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3390 3 - 74206 ttg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877539 3 + 1687011 ttg i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 37188 3 + 2165740 ttg i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084048 3 - 120421639 TTG i mm10.chr13 C 0 I 39 e dasNov3.JH577625 544677 0 + 913073 C e canFam3.chr34 30170492 151 - 42124431 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1010919.000000 s hg38.chr3_KI270779v1_alt 36123 319 + 205312 ctaatgtggcaggtgtag----ctgaagagctgaacgttt------tgact------tattttaattaattaagtggttatgtgttgcca-gtagct-cccatctg------------ggCTGTGACCCCATGGTCTGCGGATCTC-ACTCTG--------------------------GCACCAGACTCCGAG-------TGGAGCTGCATGCGGCCA------------CCGGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAGTAGGAAATGTGTCACCAACATAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGCACACC-------------------------TGCCTTGTTGGTACTGCTGGGCGT-GGAATGCCTCTC--------------GGGCTCTGACA-GTGTCATTG------------ACACTGTTG------------------CTGATCT s gorGor5.CYUI01015759v1 860475 321 - 880730 ctaatgtggctggtgtag----ctgaagagctaaacgttt------tgact------tattttaattaattaaatggttatgtgttgccagGTAGTT-CCCATCTG------------GGCTGTGACCCCATGGTCTGCGGACCTC-ACTCTG--------------------------GCACCAGACTCCGAG-------TGGAGCTGCATGTGGCCA------------CCGGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAGGTAGGAAATGTGTCACCAAAGTAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGCACACC-------------------------TGCCTTGTTTGTACTGCTCGGCGTGGGAATGCCTCTC--------------AGGCTCTGACA-GTGTCACTG------------ACACTGTTG------------------CTGATCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200266 318 + 180051392 ctaatgtggcaggtgtag----ctgaagagctgaaca-tt------tgatt------tattttaattaatttaGTGGTTGTGTGTTGCCA-GCAGCT-CCCACCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------CGGAGCTGCCTGTGGCCA------------CCAGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAATAGGAAATGTGTCACCAAAGTAGGAGC---------TGTGG---CTGCTGCG-----T-----TCTCTAGCGCACC-------------------------TGCCTTGTCTGTGCTGCGCGGTGT-GGAACGCCTCTC--------------GTTCGCTGACA-GCGTCCTTG------------ACTCTGTTG------------------CTGATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265127 318 - 181584905 ctaatgtggcaggtgtag----ctgaagagctgaaca-tt------tgatt------tattttaattaatttaGTGGTTGTGTGTTGCCA-GCAGCT-CCCACCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------CGGAGCTGCCTGTGGCCC------------CCAGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAATAGGAAACGTGTCACCAAAGTAGGAGC---------TGTGG---CTGCTGCG-----T-----TCTCTAGCGCACC-------------------------TGCCTTGTCTGTGCTGCGCGGTGT-GGAACGCCTCTC--------------GGGCGCTGACA-GCGTCCTTG------------ACTCTGTTG------------------CTGATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 25932 318 - 100774 ctaatgtggcaggtgtag----ctgaagagctgaacg-tt------tgatt------tattttaattaatttaGTGGTTGTGTGTTGCCA-GCAGCT-CCCACCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------CGGAGCTGCCTGCAGCCA------------CCAGACGGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAATAGGAAACGTGTCACCAAAGTAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGCGCACC-------------------------TGCCTTGTCTGTGCTGCGCGGTGT-GGAACGCCTCTC--------------GGGCGCTGACA-GCGTCCTTG------------ACTCTGTTG------------------CTGATCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184530 318 + 218577 CTAATGTGGCAGGTGTAG----CTGAAGAGCTGAACG-TT------TGATT------TATTTTAATTAATTTAGTGGTTGTGTGTTGCCA-GCAGCT-CCCACCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------CGGAGCTGCCTGTGGCCA------------CCAGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAATAGGAAATGAGTCACCAAAGTAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGCGCACC-------------------------TGCCTTGTCTGTGCTGCTCGGTGT-GGAACGCCTCTC--------------GGGCGCTGACA-GCGTCCTTG------------ACTCTGTTG------------------CTGACCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597189 318 - 91010382 ctaatgtggcaggtgtag----ctgaagagctgaacg-tt------tgatt------tattttaattaatttaGTGGTTGTGTGTTGCCA-GCAGCT-CCCCCCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------CGGAGCTGCCTGTGGCCA------------CCGGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAATAGGAAACATGTCACCAAAGTAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGCGCACC-------------------------TGCCTTGTCTGTGCTGCTCGGTGT-GGAACGCCTCTC--------------GGGCGCTGACA-GCGTCCTTG------------ACTCTGTTG------------------CTGATCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3393 314 - 74206 ctaatgtggcaggtgtag----ctgaagagctgaacg-tt------tgatt------tatt----ttaatttAGTGGTTGTGTGTTGCCA-GCAGCT-CCCACCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------CGGAGCTGCCTGTGGCCA------------CCAGACAGTGTGGAGTG--CCTCTTCGGGTTGTGTAGAAATAGGAAATGAGTCACCAAAGTAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGCGCACC-------------------------TGCCTTGTCTGTGCTGCTCGGTGT-GGAACACCTCTC--------------GGGCGCTGACA-GCGTCCTTG------------ACTCTGTTG------------------CTGATCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877542 317 + 1687011 ctaatgtggcaggtgtag----ctgaagagctgaatg-tt------tgatt------tattttaattaattaagtggttatgtgttgcca-gcagct-cccACCTG------------GGCTGTGACCCCATGGTCTGTGGACCTC-ACTCTG--------------------------GCACCAAACTCTGAG-------AAGAGCTGCATGCGGCCA------------CCAGACAGTGTGGAGTG--CCTCTTCGGGTTCTGTAGAAATAGGAAATGTGTCACCAAAATAGGAGC---------TGTTG---CTGCTGCG-----T-----TCTCTAGTGCACC-------------------------TGCCTTGTTTGTGCTGCTTGGTGT-GG-ATGCCTCTC--------------GGGCTCTGACA-GTGTCCTTG------------ACTCTGTTG------------------CTGATCT i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 37191 346 + 2165740 cagatgtgactggtgtga----ttgcagaggtggatg-tctcttcattaat------tgttttcattaattaagtggttatatgtggcca-acagct-cccatctg------------ggccaTGGCTGTGCAGTCCATAGGCCTC-ACTTTG--------------------------GTGCCAATCTCTGAGGGCAGTTCAGTGCTGCATGAAGCCA------------TAAGACAGTTTGGAA-----------------TAGAGAAATAG---ATGTATTACTAAAATATGAGTAATAAAAAATACTC---CGTCTGCATGCTTT-----TCTCTAGCATGCTTGAC-----ACATTTGCACTTGGTATGTCTTGTTTGTGCCACTTAGCAT-GGGAGCACTCTT--------------GCACTTGTGCATAGGCCCTTG------------ATACTGTTA------------------CTGGT-- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 544677 432 + 913073 --GGCCCTCCAGGTGTGAGGGCCTGGAGAGTCG---G-TT------TTATTTTACTGTACTTTAACTGTTTAAGT--------------A-GCAGCTGCCTACATGATAGCACAGGCCAATTGTGACCCCATGGTCCACAGACTTTGGCTCTGGAGTTGGTTGGGGACTTCAGTGCCATGTGCCAGCCCCTGGG-------GA-----GCCTGTCACCAAAGACCCCAAGGCCAAGCACTGCTGAGCGAACACCTCTGAATTGTA-GGAAATATGATATG-ATTGCCAGAACACAGGG---------TCCAAAACCTGCTCTA-----TTCTTATCTCCAGCATGCATCGCCATGGGTTTGTGTTCTTTTTATGCATT-TTGGTACTGCTGAAAAT-ATCATGCCTTTCTTTTTCCTGCCATTGCGCATCATCA-GCACCCTTGTGGGTGTGTCACATCCTGTGGCTCCATTCTCAAACTCCACTGTTCT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46084051 39 - 120421639 I e canFam3.chr34 30170492 151 - 42124431 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=140284.000000 s hg38.chr3_KI270779v1_alt 36442 32 + 205312 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAAGT s gorGor5.CYUI01015759v1 860796 32 - 880730 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAAGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200584 32 + 180051392 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265445 32 - 181584905 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26250 32 - 100774 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184848 32 + 218577 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597507 32 - 91010382 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3707 32 - 74206 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877859 32 + 1687011 CCTTGGATTTACCTGGTCCAT-----------TT------------G----------GATCAGGT i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 37537 43 + 2165740 -TGTGGAATTACCTGGTCCAT-----------TTGATAACAGAATGG----------AATCAAGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30170643 41 - 42124431 CCTAGGGTTTACACAGTCCAT-----------TT------------GTTACACACCAGATCAGG- i canFam3.chr34 I 151 C 0 s dasNov3.JH577625 545109 43 + 913073 CCCTGGATTTATCTAGTCCTTTGTTAACCATATT------------A----------GGTCAAGT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46084051 39 - 120421639 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 146259 0 - 204313951 C e saiBol1.JH378155 108481 0 - 16417988 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=287135.000000 s hg38.chr3_KI270779v1_alt 36474 71 + 205312 TCTTTCACCTATTCACATGAGCAG----------ATATCACCTTAAAACCTTAAAGGTTGGCTTAACACTT-CT------TGCCCTTT s gorGor5.CYUI01015759v1 860828 70 - 880730 TGTTTCACCTGTTCACATGAGCAG----------ATACCACCTTAAAACCTTAAAGGTTGGCTTAACACTT-CT------TGCCC-TT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200616 71 + 180051392 TCTTTCACCTATTCACACGAGCAA----------ATACCACCTTAAAACCTTAAAGTTTGGCTTAACACTT-CC------TGCCCTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265477 71 - 181584905 TCTTTCACCTATTCACACGAGCAA----------ATACCACCTTAAAACCTTAAAGTTTGGCTTAACACTT-CC------TGCCCTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26282 71 - 100774 TCTTTCACCTATTCACACGAGCAA----------ATACCACCTTAAAACCTTAAAGTTTGGCTTAACACTT-CC------TGCCCTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184880 71 + 218577 TCTTTCACCTATTCACACGAGCAA----------ATACCACCTTAAAACCTTACAGGTTGGCTTAACACTT-CC------TGCCCTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597539 71 - 91010382 TCTTTCACCTATTCACATGAGCAA----------ATACCACCTTAAAACCTTACAGGTTGGCTTAACACTT-CC------TGCCCTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3739 71 - 74206 TCTTTCACCTATTCACACGAGCAA----------ATACCACCTTAAAACCTTACAGGTTGGCTTAACACTT-CC------TGCCCTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877891 68 + 1687011 TCTTTCACCTATTCACACGAGCAA----------ATACCACCTTAAAACCTCAAAGGTTGGCTTAACACT----------TGCCCTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146259 67 - 204313951 TCTTTTGCCTATTCACATGAACAA-----------TATCACCTT-AAACCTGGAAAGCTGGCTTAACACTTACT------TGCCC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108481 68 - 16417988 TCTTTCGCCTGTTCACATGAACAG-----------TGTCATCTTAAAACCTGGAAAGCTGGCTTAACACTTCCT------TGCCG--- i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 37580 59 + 2165740 TTTTTGACCTGGTCATATGAACAA-------------------TATAACTATAAATGTTGGTTTAAC---T-CT------TGTTTTTT i otoGar3.GL873745 C 0 I 1 s canFam3.chr34 30170684 73 - 42124431 ------GCCTGTTCACATGAGCAGTATTGCTGAAATGTCAGTTTAACACCCTAAATGC--AATTGAAACTG-TG------GGATCCTT i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 545152 68 + 913073 TCTCTAACTCAAGCAGGTGAACAC-------------------TATCATGTTAAATGTTGCTTTAATACTT-ACTCTAAATGCAATTA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46084051 39 - 120421639 I e aotNan1.NW_018494784v1 71033 68 + 211231 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=4638.000000 s hg38.chr3_KI270779v1_alt 36545 1 + 205312 T s gorGor5.CYUI01015759v1 860898 1 - 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200687 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265548 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26353 1 - 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184951 1 + 218577 T i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597610 1 - 91010382 G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3810 1 - 74206 T i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877959 1 + 1687011 T i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146326 1 - 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108549 1 - 16417988 T i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 71101 1 + 211231 T i aotNan1.NW_018494784v1 I 68 C 0 s dasNov3.JH577625 545220 1 + 913073 T i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 37639 1 + 2165740 I e mm10.chr13 46084051 39 - 120421639 I e canFam3.chr34 30170757 1 - 42124431 I e cebCap1.NW_016108150v1 208674 68 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=35194.000000 s hg38.chr3_KI270779v1_alt 36546 6 + 205312 TTTTTC-------- s gorGor5.CYUI01015759v1 860899 6 - 880730 TTTTTC-------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200688 6 + 180051392 TTTTCC-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265549 6 - 181584905 TTTTCC-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26354 6 - 100774 TTTTCC-------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184952 6 + 218577 TTTTCC-------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597611 6 - 91010382 TTTTCC-------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3811 6 - 74206 TTTTCC-------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877960 6 + 1687011 TTTTCC-------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146327 6 - 204313951 TTTTTC-------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108550 6 - 16417988 TTTTTC-------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208742 6 + 306014 TTTTTC-------- i cebCap1.NW_016108150v1 I 68 C 0 s aotNan1.NW_018494784v1 71102 6 + 211231 TTTTTC-------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 37640 4 + 2165740 --TTTT-------- i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 30170758 6 - 42124431 TTTTTC-------- i canFam3.chr34 I 1 I 6 s dasNov3.JH577625 545221 12 + 913073 --TTGAGATGTAGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46084051 39 - 120421639 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1904353.000000 s hg38.chr3_KI270779v1_alt 36552 178 + 205312 TTTCTTTTAGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGCCGT-GGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAAGAATACTATTGTTGCCACAGGGTAGGAATCTAATTTCTAC s gorGor5.CYUI01015759v1 860905 179 - 880730 TTTCTTTTAGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAACGGGGAGTGCCGTGGGTGTCATCGCACTGTGCATACAGGATGGGTCCATCCATCGCAGAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGAATCTAATTTCTAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200694 178 + 180051392 TTTCTTTTAGTCTCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGACGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAATTTCTAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265555 178 - 181584905 TTTCTGTTAGTCCCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGACGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATACGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAATTTCTAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26360 178 - 100774 TTTCTTTTAGTCTCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGACGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATACGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAATTTCTAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 184958 178 + 218577 TTTCTTTTAGTCTCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTAGATCTCCTGATGGAGGACGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAATTTCTAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597617 178 - 91010382 TTTCTTTTAGTCTCTGCGATATGACACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGATGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCGTCCATCGCATAAGAGCAAAGAACACTGTTGTCGCCACAGGGTAGGACTCTAATTTCTAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3817 177 - 74206 TTTCTTCTAGTCTCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGACGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCGTCCATCGCTTAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAA-TTCTAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 877966 178 + 1687011 TTTCTTTTAGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAACGGGGAGTGCCGT-GGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAATTTCTAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146333 177 - 204313951 TTTCTTTTAGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGCCGT-GGTGTGATTGCACTGTGCATAGAAGATGGGTCCATACATCGCATAAGAGCAAAGAACACTGTTGTTGCTACAGGGTAGGAATT-AACTTTTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108556 178 - 16417988 TTTCTTTTAGTCTCTGCGATACGATACCAGCTACTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGAAGAGTGCCGT-GGTGTGATTGCACTGTGCATAGAAGATGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGAATTGAATTTTGAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208748 178 + 306014 TTTCTTTTAGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGAGAGTGCCGT-GGTGTGATTGCACTGTGCATAGAAGATGGGTCCATACATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGAATTGAATTTTTAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71108 177 + 211231 TTTCTTTTAGTCTCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAACGGGGAGTGCCGT-GGTGTGATTGCACTGTGCATAGAAGATGGGTCCATACATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGAATT-AACTTTTAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 37644 178 + 2165740 TCTTTTTAAGTCTCTGCGATATGATACCAGCTATTTTGTAGAGTATTTTGCCTTGGATCTTCTGATGGAAAATGGGGAATGTTGT-GGTGTTATTGCACTGTGCATAGAGGATGGGTCCATACATCGCATAAGAGCAAAGAATACTGTTGTTGCTACTGGGTAGGAATCTAATTTTTTC i otoGar3.GL873745 C 0 I 163 s mm10.chr13 46084090 176 - 120421639 TTTCTTACAGTCTCTGCGATATGACACCAGTTATTTTGTGGAATATTTTGCACTGGATCTTCTGATGGAAAATGGGGAGTGCCGT-GGTGTCATTGCACTGTGCATAGAAGATGGGTCCATACACCGAATAAGAGCAAAAAACACTGTTATTGCTACTGGGTAGGCTTTTATTGTAT-- i mm10.chr13 I 39 C 0 s canFam3.chr34 30170770 177 - 42124431 GTTTTTTTAGTCTCTGCGATATGATACCAGCTATTTTGTAGAGTACTTTGCCTTGGATCTCTTGATGGAAAATGGAGAATGTCGT-GGTGTTATTGCACTGTGCATAGAAGATGGGTCCATCCATCGCATAAGAGCCAAGAACACTGTTGTGGCTACCGGGTAGGAGTCTAACTTGTA- i canFam3.chr34 I 6 C 0 s dasNov3.JH577625 545233 167 + 913073 TTTTTTTCAGTCTCTCAGATATGATACCAGCTATTTTGTGGAATATTTTGCCTTGGATCTTCTGATGGAAAATGGGGAATGCCGT-GGTGTTATCGCTCTGTGCATAGAGGATGGGTCCATACACCGCATAAGAGCAAAGAACACTGTTGTTGCTACTGGGTAGGAAC----------- i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=507869.000000 s hg38.chr3_KI270779v1_alt 36730 69 + 205312 TTTATTTCCTTTGTAAA--------AATGAAT-AAATTTCATTT--------AGAGTCTCTTTATTTTAAGGAAAATAGAGGCATT s gorGor5.CYUI01015759v1 861084 70 - 880730 TTTATTTCCTTTGTAAA--------AATGAATAAAATTTCATTT--------AGAGTGTCTTTATTTTAGGGAAAATAGAGGCATT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200872 69 + 180051392 TTTATTTCATTTATAAA--------AATGAAT-AACTTTCATTT--------AGAGTTTCTTTATTTTAATGAAAATAGAGGCATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265733 69 - 181584905 TTTATTTCATTTATAAA--------AATGAAT-AACTTTCATTT--------AGAGTTTCTTTATTTTAATGAAAATAGAGGCATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26538 69 - 100774 TTTATTTCATTTATAAA--------AATGAAT-AACTTTCATTT--------AGAGTTTCTTTATTTTAATGAAAATAGAGGCCTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185136 69 + 218577 TTTATTTCATTTATAAA--------AATGAAT-AACTTTCATTT--------AGAGTTTCTTTATTTTAATGAAAATAGAGGCATT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597795 69 - 91010382 TTTATTTCATTTATACA--------AATGAAT-AACTGTCATTT--------AGAGTTTCTTTATTTTAATGAAAATGGAGGCATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 3994 69 - 74206 TTTATTTCATTTATAAA--------AATGAAT-AACTTTCATTT--------AGAGTTTCTTTATTTTAATGAAAATAGAGGCATT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878144 69 + 1687011 TTTATTTCATTTATAAA--------AATGAAT-AACTTTCATTT--------AGAGTTTCTTGGTTTTAATGAAAATAAAGGTATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146510 69 - 204313951 TTTAGTTTGTTTATAAA--------AATGAAT-CAATTTCATTT--------AGAGTTTCTTTATTTTAATAAAAATAGAGGCATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108734 69 - 16417988 TTTAGTTTGTTTATAAA--------AATGAAT-AAATTTCACTT--------AGAGTCTCTATATTTTAATGAAAATAGAGGCATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208926 69 + 306014 TTTAGTTTGTTTATAAA--------AATGAAT-AAATTTCACTT--------AGAGTCTCTTTACTTTAATGAAAATAGAGGCCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71285 69 + 211231 TTTAGTTTGTTTATAAA--------AATGAAT-AAATTTCATTT--------AGAGTTTCTTTATTTTAATGAAAATAGAGGCATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 37985 66 + 2165740 TTTATTTC-TTTATAAA--------AATGAAG-AACTTTCATTT----------AGTTTCTTTATACTAATGAAAATAGAGGCATT i otoGar3.GL873745 I 163 C 0 s mm10.chr13 46084266 68 - 120421639 TTAATTTCTTATATAAA--------AAT---T-GAGTGTCAGTATGGGGGTGGGAGTGTTTGCTTTTTTGTTAAAGTGG------T i mm10.chr13 C 0 C 0 s canFam3.chr34 30170947 58 - 42124431 TTTAATTTCTGTGTAGG--------GAAGT-T-GGGTCTCAGTT------------------TCCTTTTATAAAAATGGAAACACT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 545400 75 + 913073 TTTGTTTC-TTTATAAAGTGAATTCAGTGAAA-CGCTTGATTTC--------AGAGTTTCT-TATTCTAATAAGAATTGAGGTGTT i dasNov3.JH577625 C 0 I 2350 e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=765513.000000 s hg38.chr3_KI270779v1_alt 36799 102 + 205312 GTAGAAT-AGCAGTTCAGACACAGGCCTTGATATAACCACGTGAGGGTGATGGCCTTTCCCAGCCATGGTTCCTCACCTGTAAAGGG---------TGAGGACA--GCAGCACC s gorGor5.CYUI01015759v1 861154 102 - 880730 GTAGAATAAACAGTTCAGACACAGGCCTTGATATAACCGTGTGAGGGTGATGGCCTTT-CCAGCCGTGGTTCCTCACCTGTAAAGGG---------TGAGGACA--GCAGCACC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 200941 102 + 180051392 GTAGAAT-AACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGAGTGATGGCCTCTCCCAGCCGTGGTTCCTCACCTGTGAAGGG---------TAAGGACG--GGAGCACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265802 102 - 181584905 GTAGAAT-AACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTCCTCACCTGTGAAGGG---------TAAGGACG--GGAGCACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26607 102 - 100774 GTAGAAT-AACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTTTCCCAGCCGTGGTTTCTCACCTGTGAAGGG---------TAAGGACG--GGAGCACC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185205 102 + 218577 GTAGAAT-AACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTGCTCACCTGTAAAGGG---------TAAGGACG--GGAGCACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597864 102 - 91010382 GTAGAAT-AACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTGCTCCCCTGTGAAGGG---------TAAGGACG--GGAGCACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4063 102 - 74206 GTAGAAT-AACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTGCTCACCTGTAAAGGG---------TAAGGACG--GGAGCACC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878213 102 + 1687011 GTAGAAT-AGCGGTTCAGACACAGGCCTTGATACAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTCCTCACCTGTAAAGGG---------TAAGGACG--GGAGCACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146579 102 - 204313951 GTAGAAT-AACGGTTCAGACACAGGCCTTGACAtaaccttgtgaggatgatggcctttcccagctgtggttcctcatctgtaaacca---------tgaggaca--gcagcacc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108803 102 - 16417988 GTAGAAT-TACGGTTCAGGCACAGGCCTTGACAtaaccttgtgagggtgatggcctttcccagctgtggttcctcatctgtaacagg---------tgaggaca--gcagcacc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 208995 102 + 306014 GTAGAAT-AACGGTTCAGACACAGGCCTTGACAtaaccttgtgagggtgatggcctttcccagctgtggttcctcatctgtaaaggg---------tgaggaca--gcagcacc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71354 102 + 211231 GTAGAAT-AACGGTTCAGACACAGGCCTTGACATAACCTTGTGAGGGTGATGGCCTTTCCCAGCTGTGGTTCCTCATCTGCAAAGGG---------TCAGGACA--GCGGCACC i aotNan1.NW_018494784v1 C 0 I 134 s otoGar3.GL873745 38051 98 + 2165740 ATAGAGT-AACAGTTTACACATAGATCTTGACATAAC--TATGAAAATGAtagtcttt-ccagccttagttcctcatctat-aaggg---------agatgaca--gtggcacc i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084334 111 - 120421639 TCAGGGC-AATGGGTCAGACGTAGGCCTTCATGTCATCTCATGCAGAAGATAACCTTTCCCAGCCTTGGTACCTTTGTCACAATATAGATGTTCTCTGAGCATAATGGGGCA-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30171005 100 - 42124431 ACGGAAT-AGTGGTTCAGTCCCAGGTGGTGACCTAACCCAG-GAGTATAAtaaattttgtcagcctcagttctctatctgaaaagga----------gacaatc--atagcacc i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=262042.000000 s hg38.chr3_KI270779v1_alt 36901 79 + 205312 TGCCTC---------------------------------------------------GG--GGTGAG-------------------------AAAGCA---TGGCCCTCATTAGTCGGTAGTGGCTGCCG---------TCAGGTT--------------------------CAC--AGCGTACCTCtccc---gatttt------------------- s gorGor5.CYUI01015759v1 861256 79 - 880730 TGCCTC---------------------------------------------------GG--GGTGAG-------------------------AAAGCA---TGGCCCTCAGTAGTCGGTAGTGGCTGCCG---------TCAGGTT--------------------------CAC--AGCTTACCTCTCCC---GATTTT------------------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201043 81 + 180051392 TGCCTC---------------------------------------------------AGGCGGCGAG-------------------------AAAGCA---TGGCCCTCAGTAGACGGCGGTGGCTGCCG---------TCAGGTT--------------------------CAC--AGCTTACCTCtccc---gatttt------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265904 81 - 181584905 TGCCTC---------------------------------------------------AGGCGGCGAG-------------------------AAAGCA---TGGCCCTCAGTAGACGGCGGTGGCTGCCG---------TCAGGTT--------------------------CAC--AGCTTACCTCtccc---gatttt------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26709 81 - 100774 TGCCTC---------------------------------------------------AGGCGGCGAG-------------------------AAAGCA---TGGCCCTCAGTAGACGGGGGTGGCTGCCG---------TCAGGTT--------------------------CAC--AGCTTACCTCtccc---gatttt------------------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185307 81 + 218577 TGCCTC---------------------------------------------------AGGCGGCGAG-------------------------AAAGCA---TGGCCCTCAGTAGACGGGGGTGGCTGCCA---------TCAGGTT--------------------------CAC--agcttacctctccc---gatttg------------------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89597966 81 - 91010382 TGCCTC---------------------------------------------------AGGCGGTGAG-------------------------AAAGCA---TGGTCCTCAGTAGACGGGGGTGGCTGCCA---------TCAGGTT--------------------------CAC--agcttacctctccc---aatttt------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4165 81 - 74206 TGCCTC---------------------------------------------------AGGCGGCGAG-------------------------AAAGCA---TGGCCCTCAGTAGACGGGGGTGGCTGCCA---------TCAGGTT--------------------------CAC--AGCTTACCTCtccc---gatttt------------------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878315 81 + 1687011 TGCCTC---------------------------------------------------AGGCGGTGAG-------------------------AAAGCA---TGGCCCTCAGTAGACCGGAGTGGCTGCCA---------TCAGGTT--------------------------CAC--AGCTTACCTCtccc---gatttt------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146681 65 - 204313951 caccttgt------------------------------------------------gggaggttgag-------------------------aAAGCa---gggccctcaggagatgg------------------------------------------------------aac--agctaacccctcct---gacttt------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108905 84 - 16417988 cgccctgT------------------------------------------------GGGAGGATGAT-------------------------AAAGCG---GGGCCCTCAGCAGGTGGTAGTGGCGGCCG---------TCAGGGT--------------------------AAC--AGCTGACCCCTCCT---GACCTT------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209097 84 + 306014 cgccttgt------------------------------------------------gggaggttgAG-------------------------AAAGCA---GGGCCCTCAGCAGATGGTAGTGGCAGCTG---------TCAGGGT--------------------------AAC--AGctaacccttcct---gacttt------------------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 38149 112 + 2165740 tgccctgA-------------------------------------------------GGTGGATGAG-------------------------AGTGCAGTGTAGCCCTCAGGATATAGCAGTGGCTACCA---------TTAGgtcaaagctcagagagtccatgagggttacac--agtgtacctctcct---gattgt------------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084445 36 - 120421639 ---------------------------------------------------------------------------------------------AAATT---TGG--------------------------------------GATTA-------------------------TAA--AGCTTACTTTACCT---GTTTTA------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30171105 190 - 42124431 tgccttaCTTTGCACCTGGGAGGACCCTTGAAGAAACTGGGGTTGGATgggatccctgggtggcgcagcggtttggcgcctgcctttggcccagggcg---tgatcctggagacccgggatcgaatcccacatcgggctccgggtg--------------------------catggagcctgcttctccctctgcctctctctctctctcactatcat i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 71456 134 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=871740.000000 s hg38.chr3_KI270779v1_alt 36980 129 + 205312 ----------------------------agatgaggaaactgtggcccgaagagTCACATGGGG-TTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTTCTATGTTTATACTGA-TTCCTGGGATAGATAAGTCTGTCTTCTCCACATAATGAAAATAA s gorGor5.CYUI01015759v1 861335 130 - 880730 ----------------------------AGGTGAGGCAACTGCGGCCCGAAGAGTCACATGGGGTTTTTCTGGCAAAATCTCTCTTGT-TTTAGTGGGTTCTGTGTTTATACTGA-TTCCTGGGATAGATAAGTCTGTCTTCTCCACATAATGAAAATAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201124 128 + 180051392 ----------------------------agatgaggaaactgcggcccgaagagTCCCAT-GGG-GTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACGTAACGAAAATAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180265985 128 - 181584905 ----------------------------agatgaggaaactgcggcccgaagagTCCCAT-GGG-GTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAACGAAAATAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26790 129 - 100774 ----------------------------agatgaggaaactgcagcccgaagagTCCCATGGGG-GTTTCTGGCACAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAACGAAAATAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185388 129 + 218577 ----------------------------agatgaggaaactgcggcccaaagagTCCCATGGGG-GTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAACGAAAATAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598047 129 - 91010382 ----------------------------agatgcggaaactgcggcccgaagagTCCCATGGGG-GTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAACGAAAATAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4246 129 - 74206 ----------------------------agatgaggaaactgcggcccgaagagTCCCATGGGG-GTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAATGAAAATAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878396 129 + 1687011 ----------------------------agatgaggaaactgcagcccaaagagTCCCATGGGG-TTTTTTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTCTGTTCATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAATGAAAATAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146746 126 - 204313951 ----------------------------atatgaggaaactgtggcctaaagagTCACATGGGG-TTTTCTGGCAAAAT--CTCTTGT-TTTAGTGGGTACTGTGTTTATACTGG-TACCTAGGTTGGATAACTCTTGCTTCTCCACATAAT-GAAATAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 108989 126 - 16417988 ----------------------------AGATGAGGAAACCGCAGCCTAAAGAGTCACATGGGG-TTTTCTGGCAAAAT--CTCTTG--TTTAGTGGGTACTGTGGTTATACTGA-TTCCTGGGATGGATAACTCTTGCTTCTCTACATAATAAAAATAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209181 125 + 306014 ----------------------------agacgaggaaactgcagcctaaagagTCACATGGGG-TTTTCTGGCAAAAT--CTCTTGT-TTTAGTGGGCACTGTGTTTACACTGA-TTGCTGGGGTGGATAA--CTTGCTTCTCCACATAATGAAAATAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 71590 127 + 211231 ----------------------------agatgaggaaactgtggcctaaagagTCCCATGGGC-TTTTCTGGCAAAAT--CTCTTGT-TTCAGTGGGTACTGTGTTTATACCGA-TTCCTGGGATGGGTAACTCTTGCTTCTCCACATAATGAAAATAA i aotNan1.NW_018494784v1 I 134 I 368 s otoGar3.GL873745 38261 116 + 2165740 ----------------------------agatgaggaaactgaggcctgaagagTCACATGGAG-TTTTCT-GTATAATTTCCCTTGC-TTTAATGG-----------ATATTAA-TTCCTGAAATAGATAA-TTCTGTTTCTTCACATGATGAAAATAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084481 110 - 120421639 ------------------------------ATATAAATAGTA-AGCTTAGAGAGTCACATGGTA-TTTTCAGATAAACT--TTCCTGC-TTTCTTGTTTACTAAGT--ATACTGA-TTCTTAGAATCATAAAGTACAT----TTCAGTTAAT-------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30171295 148 - 42124431 aaataaataaaaatttaaaaaaaaaaaAAAAGAAAGAAACTG-GGGTTGGAGAGTCACATGACA-TTTTCTGGACTAACCTCTCTTTTGCTTAGTGGGTACTGTGTTTATACCAATTTTCTGGAGTAG----------TTTGTTCACATGATGAAAATAA i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=243160.000000 s hg38.chr3_KI270779v1_alt 37109 47 + 205312 AAAACTTTAATTTTATACAGTGGCA-----GTT-ACTTTAGCCACTTTAAaag s gorGor5.CYUI01015759v1 861465 47 - 880730 ATAACTTTAATTGTATACAGTGGCA-----GTT-ACTTTAGCCATTTTAAaag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201252 47 + 180051392 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266113 47 - 181584905 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26919 47 - 100774 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185517 47 + 218577 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598176 47 - 91010382 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4375 47 - 74206 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878525 47 + 1687011 GTAACTTTAATTTTATACACTGTCA-----GTT-ACTTTAACCATTTtcaaag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146872 51 - 204313951 GTAACTTTAATTTTATCCACTGTCAA-TCTGTT-ATTTTAACCATTTTAAAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109115 50 - 16417988 GT-ACTTTGACTTGATCCACTGTCAA-TCTGTT-ATTTTAACAATTTTAAaag i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209306 52 + 306014 GTAACTTTAATTTTATCCACTGTCAA-TCTGTTAATTTTAACCATTTTAAaag i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 38377 50 + 2165740 ATAAATTTGATT-TATACACTGTCAG-TTTGTT-GCTTTAGCCATTAAAAaaa i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084591 27 - 120421639 -------------------------AAGATTTC-ATTTTTACCATTTTTAAAG i mm10.chr13 C 0 C 0 s canFam3.chr34 30171443 50 - 42124431 GTAAATTCCATTTGATACACTGTTA-GTCTTTT-ATTTTAAGC-CTTTAAAAG i canFam3.chr34 C 0 I 4 e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=94890.000000 s hg38.chr3_KI270779v1_alt 37156 24 + 205312 -ttaagaagtgtcagtacagccaag s gorGor5.CYUI01015759v1 861512 24 - 880730 -ttaagtagtgtcagtacagccaag i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201299 23 + 180051392 --taaaaactgtcagtacagcgaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266160 23 - 181584905 --taaaaactgtcagtacagcgaag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26966 23 - 100774 --taaaaactgtcagtacagcgaag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185564 23 + 218577 --taaaaactgtcagtacagcgaag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598223 23 - 91010382 --taaaagctgtcagtatagtgaag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4422 23 - 74206 --taaaaactgtcagtatagcgaag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878572 24 + 1687011 -ttaaaaagtgtcaatacggccaag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146923 20 - 204313951 -TTAAAAACTATCTGTACAAC---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109165 24 - 16417988 -ttaaaaagtatctgtacaacaaag i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209358 24 + 306014 -ttaaaaagtgtctgtacagcaaag i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 38427 25 + 2165740 ctcaaaaagtttctgtacagcatag i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084618 24 - 120421639 -TTATAAgctgaaggtatatctcag i mm10.chr13 C 0 I 88 e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=419599.000000 s hg38.chr3_KI270779v1_alt 37180 80 + 205312 aaaaaaaatcagcaaaactacagggtggg-aaaaaatattttccaaaccatatatctaatgatatcttagtatctaaaata s gorGor5.CYUI01015759v1 861536 81 - 880730 aaaaaaaatcagcaaaactacaggttgggaaaaaaatattttccaaaccatatatctaatgatatcttagtatctaaaata i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201322 79 + 180051392 -gaaaaaatcagcaaaactacaggttggg-aaaaaatattttccaaaccttatatctaataatattttagtatctaaaata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266183 79 - 181584905 -gaaaaaatcagcaaaactacaggttggg-aaaaaatattttccaaaccttatatctaataatattttagtatctaaaata i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 26989 79 - 100774 -gaaaaaatcaggaaaactacaggttggg-aaaaaatattttccaaaccttatatctaataatatcttagtatctaaaata i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185587 79 + 218577 -gaaaaaatcagcaaaactacaggttggg-aaaaaatattttccaaaccatatatctaagaatatcttagtatctaaaata i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598246 79 - 91010382 -gaaaaaatcagcaaaactacaggttagg-aaaaaatattttccaaaccatatatctaatattatctttctacctaaaata i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4445 79 - 74206 -gaaaaaatcagcaaaactacaggttggg-aaaaaatattttccaaaccttatatctaataatatcttagtatctaaaata i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878596 79 + 1687011 -gaagaaatcagcaaaactacaggttggg-aaaaaatattttccaaaccttgtatctaataatatcttagtatctaaaata i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 146943 65 - 204313951 ---------------AActataggttggg-ggaaaatattttcaaaaccatttgtctgataatacctcaatatctaaaata i calJac3.chr2 C 0 I 78 s saiBol1.JH378155 109189 79 - 16417988 -gaaacaatcagcaaaactacaggttggg-aaaaaatattttcaaaagcatttatctgataataccttaatatctaaaata i saiBol1.JH378155 C 0 I 106 s cebCap1.NW_016108150v1 209382 79 + 306014 -gaaacaatcagcaaaactataggtttgg-aaaaaatattttcaaaaccatttatctcataataccttaatatctaaaata i cebCap1.NW_016108150v1 C 0 I 136 s otoGar3.GL873745 38452 77 + 2165740 -gaaataatcagcaggactacaaattggg-agaaaatatttgc-aaactatatatgcaataagggattaacttctagaat- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084642 88 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=3600.000000 s hg38.chr3_KI270779v1_alt 37260 1 + 205312 g s gorGor5.CYUI01015759v1 861617 1 - 880730 g i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201401 1 + 180051392 g i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266262 1 - 181584905 g i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27068 1 - 100774 g i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185666 1 + 218577 g i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598325 1 - 91010382 g i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4524 1 - 74206 g i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878675 1 + 1687011 g i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 38529 0 + 2165740 C e mm10.chr13 46084642 88 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 147008 78 - 204313951 I e saiBol1.JH378155 109268 106 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=885295.000000 s hg38.chr3_KI270779v1_alt 37261 280 + 205312 caaaaaaaaataaaaaataaaaaaaagc------cctact-aaaaccaacctactaaaccc---tactaaa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacatacaaatggccagttgatgtatgaaaaaatgctcaacatcaccaagcaccagagaaatgcaaattaaaaccccaatgag-tatcatctcatctcgctccagttagaatggctgttaccaagaggacaaaagatagtgagtgttgatgaggatgtggagaaaa s gorGor5.CYUI01015759v1 861618 275 - 880730 caaaaaa----aaaaaaaaaaaaaaagc------cctact--aaaccaacctactaaaccc---tactaaa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacgtacaaatggccaatttatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccagtgag-tatcatctcatctcgctccagttagaatggctgttaccaagaggacaaaagatagtgagtgttgatgaggatgtggagaaaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 201402 263 + 180051392 -----------------aaaaaaaaaac------cctact-aaaaacaacctactaaaccc---tact-aa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266263 264 - 181584905 -----------------aaaaaaaaaac------cctact-aaaaacaacctactaaaccc---tactaaa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27069 264 - 100774 -----------------aaaaaaaaaaa------cctact-aaaaacaacctactaaaccc---aactaaa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaacttaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185667 263 + 218577 ------------------aaaaaaaaac------cctact-aaaaacaacctactaaaccc---tactaaa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttgccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598326 266 - 91010382 c----------------aaaaaaacaac------cctactgaaaaacaacctactaaaccc---tactaaa-aaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4525 263 - 74206 ------------------aaaaaaaaac------cctact-aaaaacaacctactaaaccc---tactaaa-aaccaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---aggagacaaacaaatggccaattgatgtatgaaaaaatggtcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878676 249 + 1687011 ------------------aaaaaaaaac------c-----------caacctactaaaccc---tactaaa-aaacaactctactaaaaatgggcaaaggacttgaatagatatttttccag---agaag----acaaatggccaattgatgtatgaaaaaatgctcagcatcactaagcaccaaagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccagttagaatggctgttaccaagaggacaaaagagagtaagtgttggtgaggatgtggagaaaa i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 38529 257 + 2165740 ----------taaacttccaaaattaacttctttcttaac-gtaaagaactcatgcaactcagtagcaaaa-aaacaactcagttggaaatgggcaaacgactcaaataggcatttttccaa---ggaagacacataagtggctaactagtatatgaaaaaatggtcgtcatctctaat--ccagggaaaggcaaatcaaaaccacaata-------atgtcacttcaccctagtgaga------------aaaaagac--aaggtaactagtgttgatggggatgtagataaaa i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46084730 225 - 120421639 ---------------aaaaaaaaaaaag-------------aaaaggaa---agaaaGTTT---AAGTaaacaaacattttt-----aaataggtatagaacctgaatagatg--tttccaggttggagggaatacacatggtcagcaaatttatg--aaagtgctcagcaccattgaacatctggagaattcaagtaacatccataTTT-----------------------GTGCGGATGGTTAATGTAATGAT----ACAGATGGTAAATGTTGATGAAGATGTAGAGGAAA i mm10.chr13 I 88 I 2036 e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 147008 78 - 204313951 I e saiBol1.JH378155 109268 106 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=743083.000000 s hg38.chr3_KI270779v1_alt 37541 232 + 205312 gggaaccct-gtgtgctgttggtgggaatgtaaattagtacaactattgtggaaaactc----tggaggttcctcaaaagtc----------acaggactaccatgtgctccagcaacctcatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagcgttattcacaatacccgagatatggaaacaacctaaaaat-ttttggtgttt s gorGor5.CYUI01015759v1 861893 232 - 880730 gggaaccct-gtgtgctgttggtgggaatgtaaattagtacaactattatggaaaactc----tggaggttcctcaaaagcc----------acaggactaccatgtgctccagcaacctcatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagcgttattcacaatacccgagatatggaaacaacctaaaaat-ttttggtgttt i gorGor5.CYUI01015759v1 C 0 I 315 s rheMac8.chr6 201665 233 + 180051392 gggaaccct-gtgtgctgttggggggaacgtaaattagtacaactattgtggaaaactc----tggaggttcctcaaaattc----------acaggactaccatgtgctccagcaaccccatttctgggtgtatgtccaaagggcatgaaatcagaagttcaaagagacacctggaccccca--------tgttcattgcagcgttgttcacagttcccgagatatggaaaaaacctaaatatgtgttggtgttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266527 232 - 181584905 ggg-accct-gtgtgctgttggggggaatgtaaattagtacaactattgtggaaaactc----tggaggttcctcagaattc----------acaggactaccatgtgctccagcaaccccatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagcgttgttcacagttcccgagatatggaaaaaacctaagtatgtgttggtgttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27333 222 - 100774 ggg-accct-gtgtgctgttggggggaatgtaaattagtacaactattgtggaaa--------------ttcctcagaattc----------acaggactaccatgtgctccagcaaccccatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagcgttgttcacagttcccgagatatggaaaaaacctaaatatgtgttggtgttt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 185930 223 + 218577 ggggaccct-gtgtgctgttggggggaatgtaaattagtacaactgttgtggaaa--------------ttcctcagaattc----------acaggactaccatgtgctccagcaaccccatttctgggtgtatatccaaagggcgtgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagcgttgttcacagttcccgagatgtggaaaaaacctaagtatgtgttggtgttt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598592 233 - 91010382 gggaaccct-gtgtgctgttggggggaatgtaaattagtacaactattgtggaaaactc----tggaggttcctcagaattc----------acaggactaccatgtgctccagcaaccccatttctgggtgtatattcaaagggcatgaaatcagaagctcaaagagacgcctggaccccca--------tgttcattgcagcgttgttcacagttcccaagatgtggaaaaaacctaaatatgtgttgatgttt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 4788 223 - 74206 ggggaccct-gtgtgctgttggggggaatgtaaattagtacaactgttgtggaaa--------------ttcctcagaattc----------acaggactaccatgtgctccagcaaccccatttctgggtgtatatccaaagggcgtgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagcgttgttcacagttcccgagatatggaaaaaacctaagtatgtgttggtgttt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 878925 227 + 1687011 g------ct-gtgtgctgttggggggaaggtaaattagtacaactattgtggaaaactc----tggaggttcctcaaaattc----------acaggactaccatgtgctctagcaaccccatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggaccccca--------tgttcattgcagtgttgttcacagtacccgagatatggaaacaacctaaatatgtgttggtgttt i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 38786 253 + 2165740 ggaaaccctcatacgctgttggtaagaaggtaaattggtgcaactatttttgtac-ctcaaaatggaggtacctcaaaaaattaaattaaaaataaaacaaccatatcatccagcagtcttatttctgggtatgaacctgaacgttgagacatgagtagctcaaagaaatgtctgtacttccatctccatgtgctcattgcagca-tattcacagtagccaagttatgagaacaggctaaaggtctgttgtaact- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 147008 78 - 204313951 I e saiBol1.JH378155 109268 106 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=817452.000000 s hg38.chr3_KI270779v1_alt 37773 259 + 205312 aatgacaatgtggtgtgtgtacacaactgaatattattcagctatgaaaacgaaggaaatcctgtcatgtgtgacaacgtggatgaacccaaagt-cattatgttaagtgaaacgacccaggcacagaaagacagatactgc---atgtcactcatatgtgg-atctaaaactgtcacaactcacagaaacagaataggacagtggttgccaggggct-----gggggaatgcagactgtggcgatgctgattaaaggtgtaacttccc s gorGor5.CYUI01015759v1 862440 258 - 880730 aatgacaatgtgttgtgtatacacaactgaatattattcagctatgaaaa-aaaggaaatcctgtcatgtgtgacaatgtggatgaacccaaagt-cattatgctaagtgaaacgagccaggcacagaaacacagatattgc---atgtcactcatatgtgg-atctaaaactgtcacaactcacagaaacagagtaggacagtggttgccaggggct-----gggggaatgcagactgtggcgatgctgattaaaggtgtaacttccc i gorGor5.CYUI01015759v1 I 315 C 0 s rheMac8.chr6 201898 260 + 180051392 aaggaaaatgtggtgtgtatacgcaactgaatattactcagctatgaaaatgaagggaatcctgtcatttgtgacaacagggatgaacccaaagt-cattatgttaagtgaaacaagccaggcacagaatgacagatactgc---atgtcacttatatgtggaatctaaaaaagtcaaaactcatggaaacagagtaggacggtggttgccaggggct-----gggggaatgcagactgcagcgatgctgatgaaaggtgtgacttctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180266759 260 - 181584905 aaggaaaatgtggtgtgtatacgcaactgaatattactcagctatgaaaatgaagggaatcctgtcatttgtgacaacagggatgaacccaaagt-cattatgttaagtgaaacaagccaggcacagaatgacagatactgc---atgtcacttatatgtggaatctaaaaaagtcaaaactcatggaaacagagtaggacggtggttgccaggggct-----gggggaatgcagactgcagcgatgctgatgaaaggtgtgacttctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27555 260 - 100774 aaggaaaatgtggtgtgtatacgcaactgaatattactcagctatgaaaatgaagggaatcctgtcatttgtgacaacagggatgaacccaaagt-cattatgttaagtgaaacaagccaggcacagaatgacagatactgc---atgtcacttatatgtggaatctaaaaaagtcaaaactcatggaaacagagtaggacggtggttgccaggggct-----gggggaatgcagactgcagcgatgctgatgaaaggtgtgacttccc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 186153 260 + 218577 aaggaaaatgtggtgtgtatacgcaactgaatattactcagctatgaaaacgaagggaatcctgtcatttgtgacaacagggatgaacccaaagt-cattatgttaagtgaaacaagccaggcacagaatgacagatactgc---atgtcacttatatgtggaatctaaaaaagtcaaaactcaaagaaacagaataggacagtggttgccaggggct-----gggggaatgcagactgcagcgatgctgatgaaaggtgtgacttccc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89598825 257 - 91010382 aaggaaaat---gtgtgtatacgcagctgaatattactcagctatgaaaacgaagggaatctcgtcatttgtgacaagagggatgaacccaaagt-cattacgttaagtaaaacaagccaggcacagaatgacagataccgc---atgtcacttctatgtggaatctaaaaaagtcaaaactcatagaaacagagtaggacagtggttgccaggggct-----gggggaatgcagactgcagcgatgctgatgaaaggtatgacttctc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 5011 260 - 74206 aaggaaaatgtggtgtgtatacgcaactgaatattactcagctatgaaaacgaagggaatcctgtcatttgtgaaaacagggatgaacccaaagt-cattatgttaagtgaaacaagccaggcacagaatgactgatactgc---atgtcacttatatgtggaatctaaaaaagtcaaaactcaaagaaacagaataggacagtggttgccaggggct-----gggggaatgcagactgcagcgatgctgatgaaaggtgtgacttccc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 879152 260 + 1687011 aatgaaaatgtggtgtgtatacacaactgaatattactcagctgtgaaaatgaagggaatcctgtcatttgtgacagcatgtgtgaacccgaagt-cattatgttaactgaaacaagccgggcacagaataacagatactgc---atgtcacttatacgtggaatctaaacaagtcaaaactcatggaaacagagtaggagagtggttgccaggggct-----gggggaatgcagactgcggcgatgctaatgaaaggtgtgacttccc i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 39039 203 + 2165740 aatgaaaatg------------------gagtatta----------------------------------atgataacatggatgaacccggaggatggtttgttaaatgaaataagccaggtatagaaagacaaatactgcatgatgtcacttatgtgtggagtctaaaagagtttgaa-------aaacaga-----acagtggatgccaggcacggaggaggggaattacagattggggacatgttggttaaaggtgc-atttca- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e calJac3.chr2 147008 78 - 204313951 I e saiBol1.JH378155 109268 106 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=255963.000000 s hg38.chr3_KI270779v1_alt 38032 84 + 205312 gtcacaaggtgaagttctgaaggtctgataaacagcatggtggctagagttaatg----------------------------t----tatagagcatggtggccagagttaacat s gorGor5.CYUI01015759v1 862698 112 - 880730 gttacaaggtgaagttctgaaggtctgatatacagcatggtggctagagttaatgctatacagcatggtggctagagttaatgt----tatacagcatggtggctagagttaacgt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 202158 84 + 180051392 gttaccaggtgaggttcagaaggtctaatatacaacatggtggctatagtgaata----------------------------t----taTACAGCACGGTGGCTACAGTTAACAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180267019 84 - 181584905 gttaccaggtgaggttcagaagttctaatatacaacatggtggctatagtgaata----------------------------t----taTACAGCACGGTGGCTACAGTTAACAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27815 84 - 100774 gttacgaggtgaacttcagaagttctaatatacaacacggtggctatagtgaata----------------------------t----taTACAGCACGGTGGCTACAGTTAACAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 186413 84 + 218577 gttacaaggtgaacttcagaagttctaatatacaacatggtggctatagtgaata----------------------------t----taTACAGCACGGTGGCTACAGTTAACGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89599082 84 - 91010382 gttaccaggtgaggttcagaaggtctaatatacaacatggtggctatagtgaata----------------------------t----tatacagtaCGGTGGCTACAGTTAACAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 5271 84 - 74206 gttacgaggtgaacttcagaagttctaatatacaacatggtggctatagtgaata----------------------------t----taTACAGCACGGTGGCTACAGTTAACAT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 879412 84 + 1687011 attaccaggtgaggttcagaaggtctaatatacaacatggtggctatagtgaata----------------------------t----taTACAGCACGGTGGCTACAGTTAACAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147086 86 - 204313951 gttATaagatgaagttctgaagagctaacatacaacatgg-ggctatagttaata----------------------------TCTAACGTACAACATGG-GGCTATAGTTAATAT i calJac3.chr2 I 78 I 4 s otoGar3.GL873745 39242 43 + 2165740 gttaca-----aagttctgaagattt---------------------------------------------------------t----tat-tagcatggtatataaaga------ i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e saiBol1.JH378155 109268 106 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=140823.000000 s hg38.chr3_KI270779v1_alt 38116 46 + 205312 tatacagcatggtggctacagttaaaat----catacagtacggtggcta s gorGor5.CYUI01015759v1 862810 46 - 880730 tatacagcatggtggctagagttaatat----tatacagtacggtggcta i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 202242 46 + 180051392 TATACAGCACGGTGGCTATAGTGAATAT----TATACAGCATGGTGGCTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180267103 46 - 181584905 TATACAGCACGGTGGCTATAGTGAATAT----TATACAGCATGGTGGCTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27899 46 - 100774 TATACAGCACAGTGGCTATAGTGAGTAT----TATACAGCATGGTGGCTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 186497 46 + 218577 TATACAGCACGGTGGCTATAGTGAAtat----tatacagcacggtgagta i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89599166 46 - 91010382 TATACAGCATGGTGGCTATAGTGAATGT----TATACAGCACGGTGGCTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 5355 46 - 74206 TATACAGCACGGTGGCTATAGTGAAtat----tatacagcacggtgagta i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 879496 46 + 1687011 TATACAGCACGGTGGCTACAGTTAACAT----TATACAGCACGGTGGCTA i colAng1.NW_012116910v1 C 0 I 696 s calJac3.chr2 147176 48 - 204313951 CGTACAACATGG-GGCTATAGTTAATatctaacgtacaacatga-ggcta i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 109374 17 - 16417988 --------------------------------tatgcaacatgg-ggcta i saiBol1.JH378155 I 106 C 0 s otoGar3.GL873745 39285 25 + 2165740 catacagtatagtagctataattaa------------------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=5005.000000 s hg38.chr3_KI270779v1_alt 38162 1 + 205312 t s gorGor5.CYUI01015759v1 862856 1 - 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 202288 1 + 180051392 T i rheMac8.chr6 C 0 I 1667 s macFas5.chr6 180267149 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 27945 1 - 100774 T i macNem1.NW_012013899v1 C 0 I 1056 s cerAty1.NW_012004452v1 186543 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89599212 1 - 91010382 T i chlSab2.chr4 C 0 I 1505 s manLeu1.NW_012101728v1 5401 1 - 74206 t i manLeu1.NW_012101728v1 C 0 I 3 s colAng1.NW_012116910v1 880238 1 + 1687011 t i colAng1.NW_012116910v1 I 696 C 0 s calJac3.chr2 147224 1 - 204313951 t i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109391 1 - 16417988 t i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 39310 0 + 2165740 C e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=12317.000000 s hg38.chr3_KI270779v1_alt 38163 8 + 205312 cattaata--- s gorGor5.CYUI01015759v1 862857 8 - 880730 cgttaata--- i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180267150 8 - 181584905 AGTGAATA--- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 186544 8 + 218577 cattaata--- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89600718 5 - 91010382 ---taata--- i chlSab2.chr4 I 1505 C 0 s manLeu1.NW_012101728v1 5405 5 - 74206 ---taata--- i manLeu1.NW_012101728v1 I 3 C 0 s colAng1.NW_012116910v1 880239 5 + 1687011 ---tagta--- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147225 8 - 204313951 agttaata--- i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 109392 8 - 16417988 agttaata--- i saiBol1.JH378155 C 0 I 4 s otoGar3.GL873745 39310 8 + 2165740 ---taatagca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e cebCap1.NW_016108150v1 209461 136 + 306014 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 27946 1056 - 100774 I e rheMac8.chr6 202289 1667 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=5005.000000 s hg38.chr3_KI270779v1_alt 38171 1 + 205312 t s gorGor5.CYUI01015759v1 862865 1 - 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180267158 1 - 181584905 T i macFas5.chr6 C 0 I 1272 s cerAty1.NW_012004452v1 186552 1 + 218577 t i cerAty1.NW_012004452v1 C 0 I 3 s chlSab2.chr4 89600723 1 - 91010382 t i chlSab2.chr4 C 0 I 3 s manLeu1.NW_012101728v1 5410 1 - 74206 t i manLeu1.NW_012101728v1 C 0 I 3 s colAng1.NW_012116910v1 880244 1 + 1687011 t i colAng1.NW_012116910v1 C 0 I 3 s calJac3.chr2 147237 1 - 204313951 t i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 109404 1 - 16417988 t i saiBol1.JH378155 I 4 C 0 s cebCap1.NW_016108150v1 209597 1 + 306014 t i cebCap1.NW_016108150v1 I 136 C 0 s otoGar3.GL873745 39318 1 + 2165740 t i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 27946 1056 - 100774 I e rheMac8.chr6 202289 1667 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=172474.000000 s hg38.chr3_KI270779v1_alt 38172 69 + 205312 ---aacttgaaatttgcgaagagagtagaccttaggtgtctgtatctccaaaaaaaag-----gataattgtatgag s gorGor5.CYUI01015759v1 862866 69 - 880730 ---aactcgaaatttgcgaagagagtagaccttaggtgtctgtatcttcaaaaaaaag-----ggtaattgtatgag i gorGor5.CYUI01015759v1 C 0 C 0 s cerAty1.NW_012004452v1 186556 69 + 218577 ---aacttgaaatttacaaacagagtagaccttaggcgtctgtatctccaaaaaaaag-----gataattatatgag i cerAty1.NW_012004452v1 I 3 I 725 s chlSab2.chr4 89600727 68 - 91010382 ---aacttgaaatttgcgaacagagtagaccttaagcgtctatatctccaaaaaaac------gataattgtatgag i chlSab2.chr4 I 3 C 0 s manLeu1.NW_012101728v1 5414 69 - 74206 ---aacttgaaatttacaaacagagtagaccttaggcgtctgtatctccaaaaaaaag-----gataattatatgag i manLeu1.NW_012101728v1 I 3 I 725 s colAng1.NW_012116910v1 880248 68 + 1687011 ---aacttgaaatttgctaacagagtagaccttaagtatctgtatctccaaaaagac------cataatcgtatgaa i colAng1.NW_012116910v1 I 3 C 0 s calJac3.chr2 147238 68 - 204313951 ---aactttagatttgct-aaggtgtagactgtaggtgtccatatctccagaaaaaag-----gataattagatgag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109405 71 - 16417988 ---aacttgagatttgctgaaagagtagactttaggtgtccgtatctcaaaaaaaaaaaaaatgataattagat--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209598 69 + 306014 ---aacttgagatttgctaagagagtagactttaggtgtccgtatctccaaaaaaaag-----gataattagatgag i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 39319 71 + 2165740 acatacttgaaatttgttaaaa--gtagttattgaatgtctgcatcaccaaaaaatgga----aattgtgagatgat i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 27946 1056 - 100774 I e macFas5.chr6 180267159 1272 - 181584905 I e rheMac8.chr6 202289 1667 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=594479.000000 s hg38.chr3_KI270779v1_alt 38241 137 + 205312 -----------gtgatagatgtgtattaagttgattgt-gtcatcagttcacaaaataaa-tc-----atcacgctgtacaccttaaatatatacagtattgtttttt-gtttaattcatcaatcatacctcagtaaatctgggggaaaaaAA-CAA----------- s gorGor5.CYUI01015759v1 862935 138 - 880730 -----------gtgatagatgtgtattaagttgattgt-gtcatcagttcacaaaataaa-tc-----atcacgttgtacaccttaaatatatacagttttgtttttttgtttaattcatcaatcatacctcagtaaatctgggtgaaaaaAC-CAA----------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 203956 142 + 180051392 -----------gtgatagatgtgtattaatttggttgt-gtcatcagttcacaaaatata-tcaaatcatcacattgtacaccttaaatatatacggtttt-tttttttttttaattcatcaatcatacttcagtaaattggggggaaaaaAA-CAA----------- i rheMac8.chr6 I 1667 C 0 s macFas5.chr6 180268431 138 - 181584905 -----------gtgatagatgtgtattaatttgattgt-gtcatcagttcacaaaatata-tcaaatcatcacattgtacaccttaaatatatacggtttt-tttttttttttaattcatcaatcatacttcagtaaaTTGGGGGGGAAA-----AA----------- i macFas5.chr6 I 1272 C 0 s macNem1.NW_012013899v1 29002 142 - 100774 -----------gtgatagatgtgtattaatttgattgt-gtcatcagttcacaaaatata-tcaaatcatcacattgtacaccttaaatatatacggttttgttttttttcttaattcatcaatcatacttcagtaaaTTGGGGGGGAAA-AA-CAA----------- i macNem1.NW_012013899v1 I 1056 C 0 s cerAty1.NW_012004452v1 187350 138 + 218577 -----------gtgatagatgtgtattaatttgattgt-gtcatcagttcacaaaatata-tcaa---atcacgttgtacaccttaaatatatacggtttt-ggttttttttttattcatcaatcatacttcagtaaatcgggggaaaAA-AA-CAA----------- i cerAty1.NW_012004452v1 I 725 C 0 s chlSab2.chr4 89600795 144 - 91010382 -----------gtgatggatgtgtattaacttgattgt-atcatcagttcacaaaatata-tcaaatcatcacattgtacaccttaaatatatgcacttttgttttttattttaattcatcaatcatacctcagtaaatctgggggaaaaaAAGCAA----------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6208 140 - 74206 -----------gtgatagatgtgtattaatttgattgt-gtcatcagttcacaaaatata-tcaa---atcacgttgtgcaccttaaatatatacggttttggtttttttttttattcatcaatcatacttcagtaaatcggggggaaaaaAA-CAA----------- i manLeu1.NW_012101728v1 I 725 C 0 s colAng1.NW_012116910v1 880316 141 + 1687011 -----------gtgatggatgtgtattaacttgattgt-gtcatcagttcacaaaatata-tcaaatcatcacattgtataccttaaatatgtacacttct--gtttttttttaattcatcaatcatgcctcagtaaatctgggggaaaaaAG-CAA----------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147306 125 - 204313951 -----------gtaatagatgtg--ttaattaacttgt-gtcttcagttcacaaaatata-tgaa---atcatgt-----accttaaatatatacaggttt-------tttttaattcatcaattatacctcagtacatctggggaaaAA-AA-CAA----------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109476 127 - 16417988 -----------gtaatagatgtg--ttaattaacttgt-gtcttcagttcacaaaatata-tgaa---atcatgttgtacaccttaaatatatacagg----------tttttaattcgtatattatacctcagtacatctggggaaGAA-AA-CAA----------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209667 127 + 306014 -----------ataatagatgtg--ttaattaacttgt-gtcttcagttcacaaaatata-tgaa---atcatgttgtacaccttaaatacatacagg----------tttttaattcatatattatacctcagtacatctggggaaaAA-AA-CAA----------- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 39390 152 + 2165740 gggagagatgtgtgagaggtgttaattaacttgattatagtgatcagttcacattgtatacttaaatcgtca-atcatacatcttaaatatgtac--------------tttttatttgttgatcataccttagtaaagctgGGAAAACAAGA-CGAAGAAAAAAGTG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171493 4 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=391964.000000 s hg38.chr3_KI270779v1_alt 38378 59 + 205312 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTACTGGGGAAACC s gorGor5.CYUI01015759v1 863073 59 - 880730 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTATTGGGGAAACG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204098 59 + 180051392 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTATTGGGGAAATC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180268569 59 - 181584905 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTATTGGGGAAATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29144 59 - 100774 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTATTGGGGAAATC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 187488 59 + 218577 AATCCATAAAAATTTTAAAATTTTCGTTATAAAAGTAGTATATGCTTATTGGGGAAATC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89600939 59 - 91010382 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGCATATGCTTATTGGGGAAATC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6348 59 - 74206 AATCCATAAAAATTTTAAAATTTTCGTTATAAAAGTAGTATATGCTTATTGGGGAAATC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880457 59 + 1687011 AATCCATAAAAATTTTAATATTGTCATTATAAAAGTAGTATATGCTTATTGGGGAAATC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147431 59 - 204313951 AATCCataaaaatttaaaaattttcattataaaaGTGGTATATGCTTATTGGGGAAACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109603 59 - 16417988 AATCCACAAAAATTTTAAAATTTTCATTATAAAAGTGGTATATGATTATTAGGGAAACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209794 59 + 306014 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTGGTATATGCTTATTGGGGAAACC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 39542 58 + 2165740 AACCCATAAAATTTAAAAACATTTTATTAT-AGAGTAATATATGCATACCAGGAAAACT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30171497 57 - 42124431 AATCCATAAACATT--ACAGCCTTCTGTATTAAAGTAGCACGTGCTTATCAGGGAAGTC i canFam3.chr34 I 4 I 9 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=85572.000000 s hg38.chr3_KI270779v1_alt 38437 13 + 205312 TTTTGAACAGCAC s gorGor5.CYUI01015759v1 863132 13 - 880730 TTTTGAACAGCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204157 13 + 180051392 TTTTGAACAGCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180268628 13 - 181584905 TTTTGAACAGCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29203 13 - 100774 TTTTGAACAGCAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 187547 13 + 218577 TTTTGAACAGCAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89600998 13 - 91010382 TTTTGAACAGCAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6407 13 - 74206 TTTTGAACAGCAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880516 13 + 1687011 TTTTGAACAGCAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147490 13 - 204313951 TTTTGAACAGCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109662 13 - 16417988 TTTTGAATAGCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209853 13 + 306014 TTTTGAACAGCAC i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 39600 13 + 2165740 CATCAAACAACAC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171554 9 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=379374.000000 s hg38.chr3_KI270779v1_alt 38450 72 + 205312 AAATCTAAAATACAAATAGggccagacgcatagtggctcatgcctgtaatcccagcactttgggaggccgaa s gorGor5.CYUI01015759v1 863145 72 - 880730 AAATCTAAAATACAAATAGggccagacgcatagtggctcatgcctgtaatcccagcactttgggaggccgaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204170 72 + 180051392 AAAGCTAAAATACAAACAGggccagacatgcagtggctcatgcctgtaatcccagcactttgggaggccgaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180268641 72 - 181584905 AAAGCTAAAATACAAACAGggccagacgtgcagtggctcatgcctgtaatcccagcactttggaaggccgaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29216 72 - 100774 AAAGCTAAAATACAAACAGggccagacgtgcagtggctcatgcctgtaatcccagcactttgggaggccgaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 187560 72 + 218577 AAAGCTAAAATACAAACAGggccaggtgtgcagtggctcatgcctgtaatcccagcactttgggaggccgaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601011 72 - 91010382 AAAGCTAAAATACAAATAGggccaggcacgcagtggctcatgcctgtaatcccagcactttgggaggccgaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6420 72 - 74206 AAAGCTAAAATACAAACAGggccaggtgtgcagtggctcatgcctgtaatcccagcactttgggaggccgaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880529 71 + 1687011 AAAGTT-AAATACAGATAGggccaggcacgcagtggctcatgcctgtaatcccagcactttgggaggccaaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147503 72 - 204313951 AAAGCTAAAATACAAATAGGGTCAGGTgcatggtgcctcgtgcctgtaatcccagctctttggaaggccaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109675 72 - 16417988 AAAGCTAAAATACAAATAGggccaggtgcatggtgcctcatgcctgtaatcccagctctttgggaggcagaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209866 72 + 306014 AGAGCTAAAATACAAATAGggccaggtgcatggtgcctcatgcctgtaatcctagctgtttgggaggccaaa i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 39613 0 + 2165740 C e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171554 9 - 42124431 I e aotNan1.NW_018494784v1 71717 368 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1483282.000000 s hg38.chr3_KI270779v1_alt 38522 245 + 205312 gtgggtggatcacctgaggtcaggagttcaagaccagcgtggccaacgtggcgaaacccagtctctac-taaaaatacaaaaatcaattggatgtggtggtgcacacctgtattcccaggtacttgggaggctgaggcagaagaatcacttgaacttgggagccagaggttgccgtgagccgagattgtgccaccgtactccagcctgggcgacaagagttagaccctatctcaaaataaataaat s gorGor5.CYUI01015759v1 863217 244 - 880730 gtgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaacccagtctctac-taaaaatacaaaaattaattgggtgtggtggtgcacacctgtaatcccaggtactcaggaggctgaggcggaagaatcacttgaacttgggagccggaggttgccatgagccgagattgt-ccaccgtactccagcctgggcaacaagagttagaccctgtctcaaaataaataaat i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204242 244 + 180051392 gtgggaggatcacttgaggtcaggagttcgagaccagctgggccaacatggcgaaaccccatccctac-taaaaatacaaaaattaaatggacgtggtggtgcacacctgtaatcccagctacccgggaggctgaggcggaaaagtcacttgaacctgggagctggaggttgctgtgagccgagatcgtgccactgtactccagccggggtgac-agaattagactctatctcagaataaataaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180268713 244 - 181584905 gtgggaggatcacttgaggtcaggagttcgagaccagccgggccaacatggcgaaaccccatccctac-taaaaatacaaaaattaactgggcatggtggtgcacacctgtaatcccagctacccgggaggctgaggcggaaaagtcacttgaacctgggagctggaggttgctgtgagccgagatcgtgccactgtactccagcctgggtgac-agagttagactctatctcagaataaataaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29288 244 - 100774 gtgggaggatcacttgaggtcaggagttcgagaccagccgggccaacatggcgaaaccccatccctac-taaaaatacaaaaattaaatggacgtggtggtgcacacctgtaatcccagctacccgggaggctgaggcggaaaagtcacttgaacctgggagctggaggttgctgtgagccgagatcgtgccactgtactccagcctgggtgac-agagttagactctatctcagaataaataaat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 187632 244 + 218577 gtgggaggatcacttgaggtcaggagttcgagagcagccggaccaacatggcaaaaccccatctctac-taaaaatacaaaaattaactgggcatggtggtgcacacctgtaatcccagctacccgggaggctgaggcggaaaagtcacttgaacctgggagccggaggttgctgtgagccgagatcgtgccactgtgctccagcctgggcgac-agagttagaccctgtctcaaaataaatcaat i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601083 244 - 91010382 gtgggaggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaacccaatctctac-taaaaatacaaaaattaactgagcatggtggtgcacacctgtaatcccagctacccgagaggctgaggcggaaaagtcacttgaacctgggagccggaagttgctgtgagccgagatcgtgccactgtactccagcctgggcgac-agagttagactctatctcaaaataaataaat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6492 244 - 74206 gtgggaggatcacttgaggtcaggagttcgagagcagccggaccaacatggcaaaaccccatctctac-taaaaatacaaaaattaactgggcatggtggtgcacacctgtaatcccagctacccgggaggctgaggcggaaaagtcacttgaacctgggagccggaggttgctgtgagccgagatcgtgccactgtgctccagcctgggcgac-agagttagaccctgtctcaaaataaatcaat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880600 244 + 1687011 gtgggaggatcacctgaggtcaggagttcaagaccagcctggccgacatggcgaaacccaatctctac-taaaaatacaaaaattaactgggcatggtggtgcacacctgtaatcccagctacccaggaggctgaggcggaagggtcacttgaacttgggagccggaggttgccatgagctgagatcgtgccaccgtactccagcctgggcgac-agagttagaccttgtctcaaaataaataaat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147575 244 - 204313951 gtgggaagatcacttgaggtcaggagtttgagaccagcctggccaacttgacaaaaccccatttctac-aaaaaagacaaaaattaactgggtgtggtggtaaatacctgtaattccagctactcaggaggctgaggcgggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcgtcactgcactccagcctgggcgac-agagcaagaccctatctcaaaataaataaat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109747 245 - 16417988 gtgggaggatcacttgaggtcaggagtttgagaccagcgtggccaacatggcaaaaccccatttctactaaaaaatacaaaaattaattgtgtgtggtggtgcacacctgtaattccagctactcaggaggctgaggcggaagaattgcttgaacctaggaggtggaggttgcagggagccaagaatgcgtcactgcactccagcctgggcaac-agagcaagagcctatctcaaaataaataaat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 209938 242 + 306014 gtgggaggatcacttgaggtcaggagtttgagaccagcatggccaacgtggcataaccccatttccac-taaaaatacaaaaattaactgtgtgtggtggtgcacacctgtaattccagctactcaggaggctgaggcgggagaatcgcttaaacctgggaggtggaggttgcagtgagccaagattgcgtcattgcactccagcctgggcgac---agcaagagcctatctcaaaataaataaat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72085 244 + 211231 gtgggaggatcacttgaggtcaggagtttgagaccagcctggccaacttggcaaaaccccatttctac-gaaaaatacaaaaattaactgagtgcggtggtgcacacctgtaattccagctactcaggaggctgagacgggagaattgcttgaacctgggaggtggaggtttcagtgagccgagattgcgtcactgcactccagcctgggcgac-agagcaagagcctttctcagaataaataaac i aotNan1.NW_018494784v1 I 368 C 0 e otoGar3.GL873745 39613 0 + 2165740 C e mm10.chr13 46084955 2036 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171554 9 - 42124431 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=-18485.000000 s hg38.chr3_KI270779v1_alt 38767 7 + 205312 aaataaa s gorGor5.CYUI01015759v1 863461 7 - 880730 aaaataa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204486 1 + 180051392 a------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180268957 1 - 181584905 a------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29532 1 - 100774 a------ i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 187876 1 + 218577 a------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601327 1 - 91010382 a------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6736 1 - 74206 a------ i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880844 1 + 1687011 a------ i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147819 6 - 204313951 aaaata- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 109992 6 - 16417988 aaagta- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 210180 6 + 306014 aaaata- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72329 6 + 211231 aaaata- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46086991 5 - 120421639 -AAATA- i mm10.chr13 I 2036 I 4 e otoGar3.GL873745 39613 0 + 2165740 C e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30171554 9 - 42124431 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=182.000000 s hg38.chr3_KI270779v1_alt 38774 2 + 205312 ta s canFam3.chr34 30171563 2 - 42124431 TA i canFam3.chr34 I 9 C 0 e otoGar3.GL873745 39613 0 + 2165740 C e mm10.chr13 46086996 4 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 72335 0 + 211231 C e cebCap1.NW_016108150v1 210186 0 + 306014 C e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 29533 0 - 100774 C e calJac3.chr2 147825 0 - 204313951 C e saiBol1.JH378155 109998 0 - 16417988 C e colAng1.NW_012116910v1 880845 0 + 1687011 C e manLeu1.NW_012101728v1 6737 0 - 74206 C e chlSab2.chr4 89601328 0 - 91010382 C e cerAty1.NW_012004452v1 187877 0 + 218577 C e macFas5.chr6 180268958 0 - 181584905 C e rheMac8.chr6 204487 0 + 180051392 C e nomLeu3.chr11 120785647 3854 + 123690457 I e gorGor5.CYUI01015759v1 863468 0 - 880730 C e panTro5.chr3 200027651 20 + 202621043 I a score=758293.000000 s hg38.chr3_KI270779v1_alt 38776 144 + 205312 aaaTATAAATGGAAGTCTCTTCTCTGATCC-CAGGCTT--CTATCCTACCTGCGCAGGGTAGCAGCACCACTGGCGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTG-----TGCACACA----GCA-CTGAGAAGATGGTG s gorGor5.CYUI01015759v1 863468 144 - 880730 aaatacaaaTGGAAGTCCCTTCTCTGATCC-CAGGCTT--CTATCCTACCTGCGCAGGGTAGCAGCACCACTGGCGTGGCCCCC--Agtgatgtgtgtggggtgtgtgtgagtagggggttgtg-----tgCACACA----GCA-CTGAGAAGTTGGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204487 137 + 180051392 aaatacaaaTGGAAGTCCCTTCTCTGATCC-CAGGCTT--CTATCCTACATGCATAGGGTAGCAGCTCCACTGGTGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTG-----T-----------GCA-CTGAGAAGACGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180268958 137 - 181584905 aaatacaaaTGGAAGTCCCTTCTCTGATCC-CAGGCTT--CTATCCTACATGCATAGGGTAGCAGCTCCACTGGTGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTG-----T-----------GCA-CTGAGAAGACGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29533 137 - 100774 aaatacaaaTGGAAGTCCCTTCTCTGATCC-CAGGCTT--CTATCCTACATGCATAGGGTAGCAGCTCCACTGGTGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTG-----T-----------GCA-CTGAGAAGACGGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 187877 147 + 218577 aaa-acaaaTGGAAGTCCCTTCCCTGATCC-CAGGCTT--CTGTCCTGCCCGCACAGAGTAGCAGCCCCACTGGTGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTG-----TGCACACAGACAGCA-CTGAGAAGATGATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601328 148 - 91010382 aaatacaaaTGGAAGTCCGTTCTCTGATCC-CAGGCTT--CTATCCTACCTGCATAGGGTAGCAGCTCCACTGGTATGGCCCCC--AGTGATGTGTGTGGGGTGTGTATGAGTAGAGGGTTGTG-----TGCACACAGACAGCA-CTGAGAAGATGGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6737 147 - 74206 aaa-acaaaTGGAAGTCCCTTCCCTGATCC-CAGGCTT--CTGTCCTACCCGCACAGAGTAGCAGCCCCACTGGTGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTG-----TGCACACAGACAGCA-CTGAGAAGATGATG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880845 148 + 1687011 aaatacaaaTGGAAGTCCCTTCTCTGATCC-CAGGCTT--CTATCCTACCTGCATAGGGTAGCAGCTCCTCTGGCATGGCCCCC--AGTGATGTGTGTGGGGTGAGCGTGAGTAGAGGGTTGTG-----TGCACACAGGCAGCA-CTGAGAAGACGGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147825 138 - 204313951 aaaTACAGATGGAAGTCCCTTCTCTGACCT---GGCTT--CTATCGTA----CGCAGGGTAGCAGCACCACAGGCGTGGCCCCC--AGTGATGTGT-GGGGGT--ACCTGAGGAG-GGGTTGTG-----TGCACACAGACAGCA-CTGAGAAGGTGGTG i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 109998 140 - 16417988 aaatacaaaGGGAAGTCCTTTTTCTGACCC--AGGCTT--CTATCCTA----TGCAGAGTAGCAGCACCATAGGCATGACCCCT--AGTGATGTGTGGGGGGT--GCCTGAGGAG-GGGTTGTG-----TGCACACAGACAGCA-CTGAGAAGTTGGTG i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 210186 140 + 306014 aaatacaaaTGGAAGTCCTTTGTCTGACGC--AGGCTT--CCGTCCTA----TGTAGAGTAGCAGCACCACAGGCGTGACCCCC--AGTGATGTGTGTGGGGT--GCCTGAGGAG-GGGTTGTG-----TGCACACAGACAGCA-CTGAGAAGGTGGTG i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 72335 139 + 211231 aaatacaaaTGGAAGTCCCTTCTCTGACCT---GGCTT--CTGTCCTG----CGCAGGGTAGCAGCACCACAGGCGTGGCCCCC--AGTGATGTGTTTGGGGC--GCCTGAGGAG-GGGTTGTG-----TACACACAGACAGCA-CTGAGAAGGTGGTG i aotNan1.NW_018494784v1 C 0 I 24 s otoGar3.GL873745 39613 115 + 2165740 AAATACAAGTGAGAATCCCTTCT---ATCC-CCCACTTGCCTGTCCCACTTGCCTGGGATAGCAGCCTCTCTGCT-------------TAGTGTATGCACACTGTGGGGGTGAAG------GTG-----TATGCACAAACTAC---------------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087000 144 - 120421639 AAATACAA---TATTCCCCTTCTCTGTCTC-CTAGCCT--CCATCTTA--------TGTTAAGAACATCACAAGTATGGCCTCCCACGTATTGTGTGTCGTGTATATACATGCATGGGGCAGAGAACATTACAAGCAAGGGGTC-ATTAGAGGTTGGTG i mm10.chr13 I 4 I 1 s canFam3.chr34 30171565 86 - 42124431 AAGTACCAATGAAAGTGCCTTCTCTGTCCCTCAGGCTC--CCACCC--------------AGCTGC----------------CC--A-----------------------------GGGTAGTG-----T--ATACAGACAGCAGCTGTCAGAGTG--- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=116274.000000 s hg38.chr3_KI270779v1_alt 38920 24 + 205312 CCCGGGGGCTGCCCTGTCCGTTCT s gorGor5.CYUI01015759v1 863612 24 - 880730 CCCGGGGGCTGCCCTGTCCATTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204624 24 + 180051392 CCCGGGGGCTGCTGTGTCCATTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269095 24 - 181584905 CCCGGGGGCTGCTGTGTCCATTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29670 24 - 100774 CCCGGGGGCTGCTGTGTCCATTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 188024 24 + 218577 CCCGGGGGCTGCTGTGTCCATTCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601476 24 - 91010382 CCCGGGGGCTGCTGTGTCCATTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6884 24 - 74206 CCCGGGGGCTGCTGTGTCCATTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 880993 24 + 1687011 CCCGGGGGCTGCTGTGTCCGTTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 147964 23 - 204313951 CCCGGGTGTCTCCATGTCCATTC- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 110139 23 - 16417988 CCCGGGTGTCTCCACGTCCATTC- i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 210327 23 + 306014 CCCGGGTGTCTCCGTGTCCATTC- i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 39728 16 + 2165740 ---AGGGGCTGCTCTGGCC----- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087145 14 - 120421639 CCCAGAGACTGCAC---------- i mm10.chr13 I 1 C 0 s canFam3.chr34 30171651 24 - 42124431 CTTCTGGGCTGCTCTGTCCACTCT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 72474 24 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1801026.000000 s hg38.chr3_KI270779v1_alt 38944 202 + 205312 GTGATCTCATTAGACAGGAGGTCCGGACGTGGGCCACTGTGTGCAGTCACTGCTCTCTG-------TTG----------TTTCCATAGGCTACGGGCGCACCTACTTGAGCTGCACGTCTGCCCACACCAGCACCAGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGTAGGGCA s gorGor5.CYUI01015759v1 863636 202 - 880730 GTGATCTCACTAGACTGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTCTCTG-------TTG----------TTTCCATAGGCTACGGGCGCACCTACTTGAGCTGCACGTCTGCCCACACCAGCAGCGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGTAGGGCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204648 202 + 180051392 GTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTG-------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269119 202 - 181584905 GTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTG-------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29694 202 - 100774 GTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTG-------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGCGACGGCACAGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 188048 202 + 218577 GTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTG-------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601500 191 - 91010382 GTGATCTCACCAAACAAGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTG-------TTG----------TTTCCAGAGGTTACGGGTGCACCTACT-----------TCTGCCCACACCAGCACCGGTGACAGCATGGCCATGATCACCAGGGCAGACCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGTGGGGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 6908 202 - 74206 GTGATCTCACCAGACAGGAGGTCTGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTG-------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 881017 188 + 1687011 GTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGT---CAGTCACTGCTGTCTG-------TTT----------TTTCCAGAGGTTACGGGTGCACCTACT-----------TCTGCCCACACCAGCACCGGTGACAGCACAGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGTAGGGCA i colAng1.NW_012116910v1 C 0 M 1021 s calJac3.chr2 147987 200 - 204313951 GCAGTCTCATCAGACAGGAGGTCTGGATGTGGGCTGCTGTGTGCAGTCACTGCTCTC---------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGTGATGGCACAGCCATGGTCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTCCAGTTCCACCCCACAGGTAGGGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 110162 200 - 16417988 GCGCTCTCATCAGACAGGAGGTCTGGACGTGGGCCGCTGTGCGCAGTCACTGCTCTC---------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCCGCCCACACCAGCACCGGTGATGGCACGGCCATGGTCACCAGGGCAGGCCTTCCTTGCCAAGACCTGGAGTTCGTCCAGTTCCACCCCACAGGTAGGGCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 210350 200 + 306014 GCGGTCTCATCAGACAGGAGGTCTGGACGTGGGCTGCTGTGTGCAGTCACCGCTCTC---------TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCCGCCCACACCAGCACCGGTGATGGCACGGCCATGGTCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTCCAGTTCCACCCCACAGGTAGGGCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72498 200 + 211231 GCAGTCTCATCAGACAGGAGGTCTGGATGTGGGCTGCTGTGTGCAGTCACTGCTCTC---------TTG----------TTTCCAGAGGCTATGGGCGCACCTACTTCAGCTGCACATCTGCCCACACCAGCACCGGTGATGGCACAGCCATGGTCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTCCAGTTCCACCCCACAGGTAGGGCA i aotNan1.NW_018494784v1 I 24 C 0 s otoGar3.GL873745 39744 197 + 2165740 ------TCAT----CAGGAGGTCCTGACATGGGCCACTGTGT--AATCATTGTTCTTTGTTATTTTCTA----------TTTCCAGAGGCTATGGACGTACCTACTTCAGCTGCACATCTGCCCATACCAGCACCGGTGATGGCACAGCCATGATCACCAGGGCAAGCCTTCCCTGCCAGGACTTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGAAA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087159 191 - 120421639 -------CATATAAGAGGAAGTTTGG-TGTGGACTGATGCTTATAGTCACTGTTTT----------CTG----------CTTTCAGGGGCTACGGGCGAACCTACTTCAGCTGTACATCTGCCCATACCAGCACAGGGGACGGCACAGCCATGGTCACTAGGGCTGGTTTGCCTTGCCAGGACTTAGAATTTGTTCAGTTCCACCCCACAGGTAGGACA i mm10.chr13 C 0 C 0 s canFam3.chr34 30171675 208 - 42124431 --GGTGCCATTAGAAAGGCAGACCTGA--TGGTTCACTGTGTGTCATGTTCTCTCCATG-------CTGGCATGTCTGTTTTCCAGAGGTTATGGGCGCACCTACTTCAGCTGCACATCTGCCCACACCAGCACCGGTGACGGCACCGCCATGGTCACCAGGGCAGGCCTTCCCTGCCAGGACTTGGAGTTCGTTCAGTTCCACCCCACAGGTAGGATG i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=307953.000000 s hg38.chr3_KI270779v1_alt 39146 67 + 205312 GGACGCCTTGCCCGGAAGGCGTTCGGCTC--GTGTGTCTTGTAAGC------------GTGT-GGTGCCTACTCATTGCTCT s gorGor5.CYUI01015759v1 863838 67 - 880730 GGACGCCTTGCCTGGAAGGCGTTTGGCTC--GTGTGTCTTGTAAGT------------GTGT-GGTGCCTACTCATTGCTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204850 69 + 180051392 GGACACCTTGCCCGGCAGGTGTTCAGCTCATGTGTGTCTTGTAAGC------------GTGT-GGTGCCTACTCATTGCTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269321 69 - 181584905 GGACACCTTGCCCGGCAGGTGTTCAGCTCATGTGTGTCTTATAAGC------------GTGT-GGTGCCTACTCATTGCTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29896 69 - 100774 GGACACCTTGCCCGGCAGGTGTTCAGCTCATGTGTGTCTTGTAAGC------------GTGT-GGTGCCTACTCATTGCTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 188250 69 + 218577 GGACGCCTTGCCTGGCAGGCGTTCAGCTCATGTGTGTCTTGTAAGC------------GTGT-GGTGCCTACTCATTGCTCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601691 82 - 91010382 GGACACCTTGCCTGGCAGGCGTTCAGCTCATGTGTGTCTTGTAAGCTCTACTTGTAAGTTGTAGGCAACTACTCATCGCTCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7110 69 - 74206 GGACGCCTTGCCTGGCAGGCGTTCAGCTCATGTGTGTCTTGTAAGC------------GTGT-GGTGCCTACTCATTGCTCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148187 59 - 204313951 CAG---------T-GCAGGCATCGGGCTCATGTGTGTCTCATAAGC------------GTGT-GGTGCCTACTCATTGCTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 110362 66 - 16417988 CGGCGCCTTCCCT-GCAGGCACCGGCCTC--GTGTGTCTCGTGAGC------------ATGT-GGTGCCTACTCATTGCTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 210550 68 + 306014 TGGCACCTCGCCT-GCAGGCATCGGCCTCGTGTGTGTCTCGTAAGC------------ATGT-GGTGCCTACTCATTGCTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72698 68 + 211231 TGGTGCCTTGCGC-GCAGGCATCGGGCTCATGTGTGTCTCGTAAGC------------GTGT-GGTGCCTACTCATTGCTCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 39941 55 + 2165740 -GGACCCTCGCCTGGCAG----TGGGCTCGT-TGTGTCTTGTAAAC------------AGGC-AGTACC--------GGTCC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087350 64 - 120421639 -GAATACCTGTCT----GGCTCTGGGCTCTTCTGTGTATTTCAAGC------------ATGC-AGTACCTATTCCTTGCTTT i mm10.chr13 C 0 I 246 s canFam3.chr34 30171883 64 - 42124431 ----GGATTGCCTTCATGGGGTCAGGGATTTTCATGTCTTTTAAGc------------cctc-cacagct-ctcaatgctcc i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=605721.000000 s hg38.chr3_KI270779v1_alt 39213 134 + 205312 TCCATAGTTTTATGTAATAACATGGTTTTGAAgatcagcttccatagctctcaggtcctaacttcaatgtcatttccttaaggagacttttcccacactccccttcccctaaggcagtttgggccaccatctta s gorGor5.CYUI01015759v1 863905 134 - 880730 TCCATAGTTTTATGTAATAACATGGTTTTGAAGATCAGcttccttagctctcaggtcctaacttcaatgtcatttccttaaggagacttttcccacactccccttcccctgaggcagtttgggccaccgtctta i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 204919 134 + 180051392 TCCATGGTTTTATGTAATAACATGGTGTTGAAGATCAGcttcctcagctctcaggtcctcacttcaatgtcgtttccttaaggagacttttcccacactctccttcccctaaggcagtttgggccagcgtttta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269390 134 - 181584905 TCCATGGTTTTATGTAATAACATGGTGTTGAAGATCAGcttcctcagctctcaggtcctcacttcaatgtcgtttccttaaggagacttttcctacactctccttcccctaaggcagtttgggccagcgtttta i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 29965 134 - 100774 TCCATGGTTTTATGTAATAACATGGTGTTGAAGATCAgcttcctcagctctcaggtcctcacttcaatgtcctttacttaaggagacttttcccacactctCCTTCCCCTAAGGCAGTTTGGGCCAGCGTTTTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 188319 134 + 218577 TCCATGGTTTTATGTGGTAACGTGGTGTTGAAGATCAGctttctcagctctcaggtcctcacttcaatgtcgtttccttaaggagacttttcccagacttcccttcccctaaggcagtttgggccagcgtttta i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601773 134 - 91010382 TCCATAGGTTTATGTGGTAACGTGGTTTTGAAGATCAGctttctcagctctcaggtcctaacttcaatgtcgtttccttaaggagacttttcccacacttcccttcccctaaggcagtttgggccagcgtttta i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7179 134 - 74206 TCCATGGTTTTATGTGGTAACGTGGTGTTGAAGATCAGctttctcagctctcaggtcctcacttcaatgtcgtttccttaaggagacttttcccacacttcccttcccctaaggcagtttgggccagcgtttta i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148246 104 - 204313951 GCcatagttctat------------------------gctttctcggctctcaggtcctgacttaaatgtcatttccttaaggagactttgcccacacct------ccctaaggtagtttgggccaccgtctta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 110428 104 - 16417988 GCcatagttctct------------------------gctttctcagctctcaggtcctgacttaaatgtcatttccttagggagactgtgcccacacct------cgctaaggtagtttgggccaccatctta i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 210618 103 + 306014 GCcatagttctat------------------------gctttctcagctctcagatcctgacttaaatgtcatttccttaaggagactgtg-ccacacct------ccctaaggtagtttggaccactgtcttg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72766 104 + 211231 GCCACAGTTCTAT------------------------gctttctcagctctcaggtgctgacttaaatgtcatttccttaaggagactttgcccacacct------ccctaaggtaatttgggccaccgtctta i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 39996 121 + 2165740 CCTACAGTTTCATGTACTAACATA---CTTATCATTGGAACTTTTGTGTCtcaggtcctaatctaaatgtcatttcctca---agattttctcctgattt------ccctaaggcagtttaggtc-ctatcttg i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30171947 100 - 42124431 tcggcaattccatacactgacat-----------------------gttctcagagcccacct----tgtcatttgctcaaggagatctttccctgtctc------ccccaaagcagcttagggca-catctta i canFam3.chr34 C 0 I 21 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=351226.000000 s hg38.chr3_KI270779v1_alt 39347 62 + 205312 tgcatttctcaagagccctaaaccctgccttggtgatacttatgccagcagtaaagcaggga s gorGor5.CYUI01015759v1 864039 58 - 880730 tgcatttctcaagagccctgaaccctgccttggtgatac----gccagcagtaaagcaggga i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205053 62 + 180051392 tgcatttctgaagagccctaaaccctgccttgatcatacttgtgccagcagtaaagcaggga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269524 62 - 181584905 tgcatttctgaagagccctaaaccctgccttgatcatacttgtgccagcagtaaagcaggga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 30099 62 - 100774 TGCATTTCTGAAGAGCCCTAAACCCTGCCTTGATCATACTTGTGCCAGCAGTAAAGCAGGGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 188453 62 + 218577 tgcatttctgaagagccctaaaccctgccttggtgatacttatgccagcagtaaagcaggga i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601907 62 - 91010382 tgcatttctgaagagccctaaaccctgccttggtgatacttgtgccagcagtaaagcaggga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7313 62 - 74206 tgcatttctgaagagccctaaaccctgccttggtgatacttgtgccagcagtaaagcaggga i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148350 62 - 204313951 cgcattcctcaagaaccctaaaccctgccttggtgatacttatcccagcagtaaagcgggga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 110532 62 - 16417988 cgcattccttaagaaccctaaaccctgccttggtgatacttatcccagcagtagagcgggga i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 210721 62 + 306014 tgcattccttaagaacccgaaaccctgccttggtgatacttaccccggcagtaaagcgggga i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72870 62 + 211231 cacattcctcaggaaccctaaaccctgccttgatgatgcttatcccagcagtagagagggga i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 40117 62 + 2165740 tgtgttcctcaagaactctgaccattgccttggcagcacttctcccagttgtgaagcaatga i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172047 21 - 42124431 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1490001.000000 s hg38.chr3_KI270779v1_alt 39409 298 + 205312 ttgaggccgggcatggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaagaccagcctgcacaacatggtgaaacctcatctctactaaacataaaaaaatcagctgggcatggtggcatgcacctgtgatcccagctacttgggaggctgaggcgggaggaatgct----tgaacctgggaggcagaggttgcagtgagccgagatcgcaccactgcgctccagcctgggcaacagagtaagacttcgtctcaaaaaaaaaaa-a s gorGor5.CYUI01015759v1 864097 298 - 880730 ttgaggccgggcgtggtggtttacacctgtaatcccagcactttgggagaccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgcgcaacatggtgaaacctcatctctactaaacataaaaaaatcagctgggcatggtggcatgcacctgtgatcccagctacttgggaggctgaggcgggaggaatgct----tgaacctgggaggcagaggttgcagtgagccgagatcgcaccactgcgctccagcctgggcagcagagtaagacttcatctcaaaaaaaaaaa-a i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205115 297 + 180051392 ttgaggccaggcacggtggctcatgcctggaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcccgaccaacatggtgaaacctcatgtctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctataatcccagctacttgggaggctgaggcgggaggaatgtt----tcaacctgggaggcagaggttgcagtgagccgaggtcgcacccctgcactccagcctgggcaacagagt-agactccgtctcaaaaaaaaaaa-a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269586 298 - 181584905 ttgaggccaggcgcggtggctcatgcctggaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcccgaccaacatggtgaaacctcatgtctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctataatcccagctacttgggaggctgaggtgggaggaatgtt----tcaacctgggaggcagaggttgcagtgagcccaggtcgcacccctgcactccagcctgggcaacagagtaagactccgtctcaaaaaaaaaaa-a i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 30161 297 - 100774 TTGAggccaggcgcggtggctcatgcctggaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcccgaccaacatggtgaaacctcatgtctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctgtaatcccagctacttgggaggctgaggtgggaggaatgtt----tcaacctgggaggcagaggttgcagtgagccgaggtcgcacccctgcactccagcctgggcaacagagt-agactccgtctcaaaaaaaaaaa-a i macNem1.NW_012013899v1 C 0 I 689 s cerAty1.NW_012004452v1 188515 298 + 218577 ttgaggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccagggcggccggatcacccgaggtcaggagttcaagaccagcccgaccaacatggtgaaacctcatctctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctgtaaccccagctacttgggaggctgaggtgggaggaatgtt----tcaacctgggaggcagaggttgcagtgagccgagatcgcatccctgcactccagcctgggcaacagagtaagactccgtctcaaaaaaaaaaa-a i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89601969 291 - 91010382 ttgaggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcccagccaacatggtgaaacctcatctctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctgtaatcccagctacttgggaggccaaggcaagaggagtact----tgaatctgggaggcagaggttgcagtgagccgagatcgcacccctacactccagcctgggcaacagagtaagactctgtctc-------aaaa-a i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7375 298 - 74206 ttgaggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccagggcggccggatcacccgaggtcaggagttcaagaccagcccgaccaacatggtgaaacctcatctctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctgtaaccccagctacttgggaggctgaggtgggaggaatgtt----tcaacctgggaggcagaggttgcagtgagccgagatcgcatccctgcactccagcctgggcaacagagtaagactccgtctcaaaaaaaaaaa-a i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148412 299 - 204313951 ttgaggccgggcacagtgactcacacctgtcatctcagcactttgggaggtcgaggcaggtggatcacctgaggtcaggggttcgagaccagcctggccaacatggtgaaacctcatctctactaaaaatacaaaaattaggtgggcatggtggcaggtgcctgtaatcccagctactcaggagactgaggcaggaggaacgcttgactgaacct--gaggcagaggttgcagtgagctcagatcgtgccacggccctccagcctgggcaacagagtaagactccatctcaagtaaaaaaa-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 110594 299 - 16417988 ttgaggccgggcacagtgactcacacctgtcatctcagcactttgggaagccgaggcaggcggatcaccagaggtcaggagttcgagaccagcctggccaacatggtgaaacctcatctctactaaaaatacaaaaattagccaggcatggtggcgagtgcctgtaatcccagctactcaggagactaaggcgggaggaacgcttgattgaacctgagaggcggaggttgcagtgagctgagattgcgccactgccctccagcctgggcaacagagtaagactccgtctt--gcgaaaaaa-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 210783 299 + 306014 ttgaggccgggcgcagtgactcacacctgtcatctcagcactttgggtggccgaggcaggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaacctcatttctacgaaaaatacaaaaattagccgggcatggtggcgggtgcctctaatcccagctactcggaagacagaggtgggaggaacgcttgattgaacctgagaggcggaggtggcagtgagctgagatcgcgccactgccctccagcctgggcaacacagtaagactccgtctt--gaggaaaaa-- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 72932 302 + 211231 ctggggccgggcgcagtgactcacacctgtcatctcagcactttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacctcatctctactaaaaatacaaaaattatctgggcatggtggcaggtgcctgtaatcccagctactcaggagactgaggtgggaggaacacttgactgaacctgagaggtggaggttgcagtgagctgagatcgcgccacggccctccagcctaggcaacggagtaagactccatctcgagtaaaaaaag- i aotNan1.NW_018494784v1 C 0 I 53 e otoGar3.GL873745 40179 0 + 2165740 C e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172047 21 - 42124431 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1110.000000 s hg38.chr3_KI270779v1_alt 39707 8 + 205312 aaaaaaag s gorGor5.CYUI01015759v1 864395 1 - 880730 -------g i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205412 1 + 180051392 -------g i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269884 1 - 181584905 -------g i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 188813 4 + 218577 ----aaag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89602260 8 - 91010382 aaaaaaag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7673 8 - 74206 aaaaaaag i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 40179 0 + 2165740 C e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172047 21 - 42124431 I e aotNan1.NW_018494784v1 73234 53 + 211231 I e cebCap1.NW_016108150v1 211082 0 + 306014 C e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 30458 689 - 100774 I e calJac3.chr2 148711 0 - 204313951 C e saiBol1.JH378155 110893 0 - 16417988 C e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=148734.000000 s hg38.chr3_KI270779v1_alt 39715 39 + 205312 taaagcaggaattgttcagtgtccct-ctttgcagtgagg s gorGor5.CYUI01015759v1 864396 39 - 880730 taaagcagggattgttcagtgtccct-ctttgcagtgagg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205413 39 + 180051392 taaagcagggattgttcagtgtccct-cttcgcaacgagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269885 39 - 181584905 taaagcagggattgttcagtgtccct-cttcgcaacgagg i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 188817 39 + 218577 taaagcagggattgttcagtgtccct-cttcgcaacgagg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89602268 39 - 91010382 ttaagcagggattgttcagtgtccct-cttcacaacgagg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7681 39 - 74206 taaagcagggattgttcagtgtccct-cttcgcaacgagg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148711 39 - 204313951 -aaggcagggattgttcagtgtccctaattcgcaacaagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 110893 38 - 16417988 -aaggcagggattgttcagtgtcctt-ctttgcaacgagt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 211082 38 + 306014 -aaggcagggattgttcggtgtcctt-cttcgcaatgagt i cebCap1.NW_016108150v1 C 0 C 0 s canFam3.chr34 30172068 39 - 42124431 tagagccatgactgttcagtattcct-ctccctgactcag i canFam3.chr34 I 21 C 0 e otoGar3.GL873745 40179 0 + 2165740 C e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 73234 53 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 30458 689 - 100774 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=70075.000000 s hg38.chr3_KI270779v1_alt 39754 16 + 205312 ttgtcagcaactcggg s gorGor5.CYUI01015759v1 864435 16 - 880730 tcgtcagctcctcggg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205452 16 + 180051392 tcgtcagctcctcggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269924 16 - 181584905 tcgtcagctcctcggg i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 188856 16 + 218577 tcgtcagctcctcggg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89602307 16 - 91010382 ttgtcagctcctcggg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7720 16 - 74206 tcgtcagctcctcggg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148750 16 - 204313951 tcatgtgcttcttggg i calJac3.chr2 C 0 I 2 s saiBol1.JH378155 110931 16 - 16417988 tcatctgctcctcagg i saiBol1.JH378155 C 0 I 2 s cebCap1.NW_016108150v1 211120 16 + 306014 tcgtctgctcctcggg i cebCap1.NW_016108150v1 C 0 I 2 s otoGar3.GL873745 40179 16 + 2165740 ttgtcagctccttggg i otoGar3.GL873745 C 0 I 2 s canFam3.chr34 30172107 16 - 42124431 tggtctgctcccagag i canFam3.chr34 C 0 C 0 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e aotNan1.NW_018494784v1 73234 53 + 211231 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 30458 689 - 100774 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=528309.000000 s hg38.chr3_KI270779v1_alt 39770 123 + 205312 ---caggcaggtct-tctcattaac------tggggtgctccacgcccagcacatggtagggtctccatcggggtttactgagtgaGCATTCTGAGAGCTG-GG-TGAATGCCGTGGAACCAAGAAGCAGCACAG s gorGor5.CYUI01015759v1 864451 123 - 880730 ---caggcaggtct-tctcattaac------tggggtgctccatgcccagcacatggtagggtctccatcggggtttactgagtgaGCATTCTGAGAGCTG-GG-TGAATGCCGTGGAACCGAGAAGCAGCACAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205468 123 + 180051392 ---caggcaggtct-tctcattagc------tggggtggcccatgcccagcacgtggcagggtctccgtcagggtttgctgagtgaGCGTTCTGAGAGCTG-GG-AGAATGCCGTGGAACCCAGAAGCAGCACGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180269940 123 - 181584905 ---caggcaggtct-tctcattagc------tggggtggcccatgcccagcacgtggcagggtctccatcagggtttgctgagtgaGCGTTCTGAGAGCTG-GG-AGAATGCCGTGGAACCCAGAAGCAGCACGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 188872 123 + 218577 ---caggcaggtct-tctcattagc------tggggtggcccatgcccagcacgtggcagggtctccatcagggtttgctgagtgaGCGTTCTGAGAGCTG-GG-AGAATGCCGTGGAACCCAGAAGCAGCACGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89602323 123 - 91010382 ---caggcaggtct-tctcattcgc------tggggtggcccacgcccagcgcgtggcagggtctccatcagggtttactgaGGGAGCATTCTGAGAGCCG-GG-AGAATGCCGTGGAACCCAGAAGCAGCACAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7736 123 - 74206 ---caggcaggtct-tctcattagc------tggggtggcccatgcccagcacgtggcagggtctccatcagggtttgctgagtgaGCGTTCTGAGAGCTG-GG-AGAATGCCGTGGAACCCAGAAGCAGCACGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 148768 123 - 204313951 ---cgggcaggtct-tctcattgac------cggggttctccaagcccagcacatggcagggcctccatcagggtttcctgagtgaGCACCCTGAGAGCTG-GG-AGGGTGCCGTGGACCCAAGAAGCAGCACAG i calJac3.chr2 I 2 C 0 s saiBol1.JH378155 110949 120 - 16417988 ---caggcaggtct-tctcattggc------cagggttctcccagcccagcacgtggcagggcctccatcaggg-ttcctgagtgaGCACCCTGAGAGCTG-GG-AGGATG-CGTGGACCCGAGAA-CAGCACAG i saiBol1.JH378155 I 2 C 0 s cebCap1.NW_016108150v1 211138 122 + 306014 ---caggcaggtct-tctcattggc------cagggttctcccagcccagcacgtggcagggcctccatcaggg-ttcctgagtgaGCACCCTGAGAGCTG-GG-AGGATGCCGTGGACCCGAGAACCAGCACAG i cebCap1.NW_016108150v1 I 2 C 0 s aotNan1.NW_018494784v1 73287 123 + 211231 ---cgggcaggcct-tctcattgac------tggggttctccaagcccagcatatggcagggcctctatcagggtttcctgagtgaGCACCCTGAGAGCTG-GG-AGGATGCCATGGACCCGAGAAGCAGCGCAG i aotNan1.NW_018494784v1 I 53 C 0 s otoGar3.GL873745 40197 94 + 2165740 ---gaggcaggtctgtctcactggcactatgtgtggt-------gcccggcacatg--------------------------gTGGGCATTCTCTGAGCTA-GGTAGCATATC-TGA---CCAGCAGTGCCACAA i otoGar3.GL873745 I 2 C 0 s canFam3.chr34 30172123 115 - 42124431 gtgggggccagtac-t-------gc------tgt-gttcacagtgcctgacgcacagtaggacct-gggcagtatttac-aagtgaatgtCCTCACAGCTGTGG-GGGATGCTGTTGA--CGAGATGTGGCATGG i canFam3.chr34 C 0 C 0 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 30458 689 - 100774 I e colAng1.NW_012116910v1 881205 1021 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1264574.000000 s hg38.chr3_KI270779v1_alt 39893 250 + 205312 GCAGATTTCAGCTTTGTAGG-ACAACACAGAGCTTCCGTGACAATGGGATGTAAAGTTAAGACACAGCCATGAGA-----GA----------ACCCCATGTGACGTT-GGGCGCT-GGGCTCAGCCCACGTGACCACTGAGGGAGCTT-GTCGTGGGGAAGATGAGCTCGTCTTGGGGACGTCTGACGGTTGAGGTTACGAATGTGCAATTTGGAGACATTAACTCAGAAATGACAGTTGAAGTCTTGAGTTTGGAGGAGGTTCTTCAA s gorGor5.CYUI01015759v1 864574 250 - 880730 GCAGATTTCAGCTGTGTAGG-AGAACACGGAGCTTCCGTGACAATGGGATGTAAGGTTAAGACACAGACATGACA-----GA----------ACCCCACGTGACATT-GGGCGCT-GGGCTCAGCCCACGTGACCACTGAGGGAGCTT-GTCGTGGGGAAGATGAGCTCGTCTTGGGGACGTCTGACGGTTGAGGTTACGAATGTGCAACTTGGAGACATTAACTCAGAAATGACAGTTGAAGTCTTGAGTTTGGAGGAGGTTCTTCAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205591 251 + 180051392 GCAGATTTCAGCTTTGTAGG--GAACACAGAGCTTCCGCGATAATGGGGTGTAAAGTTAGGGCACGGCCGTGACA-----GA----------ACCCCGTGTGACGTTCGGACGTTGGGGCTCCGCCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCGGGGACGTCTGACGGTTGAGCTTACGAATGTGCAGTTTGGAGACATTCACACAGAAATGACAGTTGAAGTCTTGAGTTTGGGGGAGATTCTTCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180270063 252 - 181584905 GCAGATTTCGGCTTTGTAGG-AGAACACGGAGCTTCCGCGATAATGGGGTGTAAAGTTAGGGCACGGCCGTGACA-----GA----------ACCCCGTGTGACGTTCGGACGTTGGGGCTCCGCCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCGGGGACGTCTGACGGTTGAGCTTACGAATGTGCAGTTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTTGGGGGAGGTTCTTCAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 188995 252 + 218577 GCAGATTCCGGCTTTGTAGG-AGAACACGGAGCTTCCGCGGTAATGGGGTGTAAAGTTAGGGCACAGCCGTGACA-----GA----------ACCCCGTGTGACGTTCGGACATTGGGGCTCCGCCCACACAACCACTGAGGGAGCTT-TTTGAGGGGAAGATGCGCTCATCTCGGGGACGTCTGACGGTTGAGCTTAGGAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTAAAGTCTTGAGTTTGGGGGAGGTTCTTCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89602446 252 - 91010382 GCAGATTTCGGCTTTGTAGG-AGAACATGGAGCTTCCGCGATAATGGGGTGTAAAGTTAGGGCACAGCCGTGACA-----GA----------ACCTCGTGTGACGTTCGGACATTGGGGCTCAGCCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCGGAGACGTCTGACGGTTGAGCTTACAAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTGGGGGGAGGTTCTTCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 7859 252 - 74206 GCAGATTCCGGCTTTGTAGG-AGAACACGGAGCTTCCGCGGTAATGGGGTGTAAAGTTAGGGCACAGCCGTGACA-----GA----------ACCCCGTGTGACGTTCGGACATTGGGGCTCCGCCCACACAACCACTGAGGGAGCTT-TTTGAGGGGAAGATGCGCTCATCTCGGGGACGTCTGACGGTTGAGCTTAGGAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTTGGGGGAGGTTCTTCAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 882226 252 + 1687011 GCAGCTTTCGGCTTTGTAGG-AGAACATGGAGCTTCCGCGATGACGGGATGTAAAGTCAGGGCACAGCCGTGACA-----GA----------ACCGCGTGTGACGTTCGGACATTGGGGCTTAGGCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCGGGGACGTCTGACGGTTGAGCTTATGAATGTGCAGTTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTTGGGGGCGGTTCTTCAG i colAng1.NW_012116910v1 M 1021 C 0 s calJac3.chr2 148891 250 - 204313951 GCGGATTTCAGCTTCGTAGG-AGAACATGGAGCTTCTGTGATCGTGGGGTGCAAAGTTAGGACACAGCTGTGACA-----GA----------ACC-CATGTGACATTTAGGCATT--GGCTCAGCCCACGTGACCACTGAAGGAGCTTCGTCCTGGGGGAGATGAACTCACCTTGGGGACGTCTGATGGTTGAGGTTACGAATGTGCAGTTTGGAGACATTAACACAGAAATGACAGTTGCAGTCTTGAGTTTGGGGGACGCTTTTCAG i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 111069 240 - 16417988 GCAGACTTCAGCTTCATAGG-AGAACATGGAGCTCCAGTGATAGTGGGGTGCAAAGTTAGGAC-CAGCTGTGACA-------------------------TGACATTTGGGCGTT--GGCTCAGCCCACACGACCACTGAGGGAGCTTCGTCCAGGGGGAGATGAACTCACCTTGGGGACGTCTGATGGTTGAAGTTACGAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTAAATTTGGGGGAGGCTTTTCAG i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 211260 250 + 306014 GCAGACTTCAGCTTCATAGG-AGAACATGGAGCTCCAGAGATAGTGGGGTGCAAAGTTAGGACACAGCTGTGACA-----GG----------ACC-CATGTGACATTTGGGCATT--GGCTCAGCCCACACGACCACTGAGGGAGCTTCGTCCTGGGGGAGATGAACTCACCTTGGGGATGTCTGATGGTTGAGGTTACGAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAATTTGGGGGAGACTTTTCAG i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 73410 250 + 211231 GCAGATTTCAGCTTCCTAGG-AGAACATGGAGCTTCCGTGATAGTGGGGTGCAAAGTCAGGACACAGCTGTGACA-----GA----------ACC-CATGTGACATTTGGGCACT--GGCTCAGCCCACATGACCACTGAAGGAGCTTCATCCTGAGGGAGATGAACTCACCTCGGAGACGTCTGATGGTTGAGGTTATGAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTTGGGGGAGGCTTTTCAG i aotNan1.NW_018494784v1 C 0 I 1 s otoGar3.GL873745 40291 220 + 2165740 GCAGACTTCAGTCCGGGAGGGAGAAGATCAGGCTTACACAGGACTGAGGTGTGAAGGTAGCATACAGCTGTGACAGGACAGA----------ACTCCACGTCATGAAGGGACACT-GGGCCCTCCCCA-----------------TTT---------GGGGACTAGCTACTTAGGGGATTGTCAGATAGTTGA---CACAGTTGTGGGATTCAATGACATTGAC---------ACAATTGAAGTCCCCTTTGGGGGGGATGTTTTCTAG i otoGar3.GL873745 C 0 I 1 s canFam3.chr34 30172238 217 - 42124431 GCACAGT----CGCTGTAGGGAGGACATCAAGCTGTCCCAGTAGTAGAGTATAAAGCTGAGATG-AGCTGTGGCA-----GACATGACCCCCCCCCCCCAAGATGTT-GGTAACT--------GCCCA---------------------GTCATGGACAGATTGAGCTCCTCTTGG-GTCCTCagacagttgagtgtgcaaatgtggggttcagaaggg--aggtctgggctgagggtgcaggtct--ggTTTG-------TTATCCAG i canFam3.chr34 C 0 C 0 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e macNem1.NW_012013899v1 30458 689 - 100774 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=1200468.000000 s hg38.chr3_KI270779v1_alt 40143 215 + 205312 -AATGAGTCAGAGACAG------ACACA--CACACGTCTGCCTCTTGTTTGAGGTGACTCGTCCTG----GACTTTTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCCAAAGAACCAGACCTGTGTCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGATCCCTGGAAGGGATG-AAAATAAGAAATGGATTTGTTGTAGG-tt-------------------------tt-tttttt s gorGor5.CYUI01015759v1 864824 211 - 880730 -AATGAGTCAGAGACAG------ACACA--CACA--TCTGCCTC--GTTTGAGGTGACCTGTCCTG----GACTTTTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCCAAAGAACCAGACCTGTGTCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGATCCCTGGAAGGGATG-ACAGTAAGAAATGGATTTGTTGTAGG-tt-------------------------tt-tttttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 205842 209 + 180051392 -AATGAGTCAGAGAGAG----ACACACA--CACA--TCTGCCTCTTGTT-----TGACTCGTCCTG----GACTTTTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTGCCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGGTCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGG--t-------------------------tt-tttttt i rheMac8.chr6 C 0 I 3 s macFas5.chr6 180270315 208 - 181584905 -AATGAGTCAGAGAGAG------ACACA--CACA--TCTGCCTCTTGTT-----TGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTGCCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGGTCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGG-tt-------------------------tt-tttttt i macFas5.chr6 C 0 I 3 s macNem1.NW_012013899v1 31147 208 - 100774 -aaTGAGTCAGAGAGAG------ACACA--CACA--TCTGCCTCTTGTT-----TGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTGCCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGGTCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGG-tt-------------------------tt-tttttt i macNem1.NW_012013899v1 I 689 I 3 s cerAty1.NW_012004452v1 189247 223 + 218577 -AATGAGTCAGAGAGAGAG--ACACACA--CACA--TCTGCCTCTTGTTTGAGGTGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTCAAGAACCAGACCTGTGCCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGGTCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGG-tttttt-------------------tgtt-tttttt i cerAty1.NW_012004452v1 C 0 I 3 s chlSab2.chr4 89602698 224 - 91010382 -AATGAGTCAGAGAGAGAG--AGACACA--CACA--TCTACCTCTTGTTTGAGGTGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-AATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTGCCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGATCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGGttttttt-------------------tgtt-tttttt i chlSab2.chr4 C 0 I 3 s manLeu1.NW_012101728v1 8111 223 - 74206 -AATGAGTCAGAGAGAGAG--ACACACA--CACA--TCTGCCTCTTGTTTGAGGTGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTACCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGGTCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGG-tttttt-------------------tgtt-tttttt i manLeu1.NW_012101728v1 C 0 I 5 s colAng1.NW_012116910v1 882478 214 + 1687011 -AATGAGTCAGAGAGAG----ACACACA--CACA--TCTGCCTCTTGTTTGAGGTGACCCGTCCTG----GACTTCTCT---GGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGCAGTGG------------TGCTGAAGAACCAGACATGTGCCT--TCTCTTT-CT--CTGTCAGTGTCAGCTTTCTGATCCCTGGAAGGGATG-AAAATAAGAAATGAATTTGTTGTAGG-TT-------------------------TT-TTTTTT i colAng1.NW_012116910v1 C 0 I 837 s calJac3.chr2 149142 210 - 204313951 -AATGAGTCAGAGAGAG----------A--CACA--TCTGCCTCTTGTTTGATGTGACTCGTCGTGATGTGACTTTCCT--GGATTGCTTTTCTAACTTGTGGAC-TACAGAGACCCC----TGTAGTGG------------TGCTAAGGAACCAGACCTGTGTCT--TCTTTTT-CT--CTCTCAGTGGCATCTTTCTGATCCCTGGCAGGGATG-AAAATAAAAAATGTATTTGTCGTGGG-GT-------------------------TT-TGT--- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 111310 197 - 16417988 -AATGAGTCAGAGAGAG----------A--GACA--TGTGCCTCTTGTT---------------TGATGTGACTTTCCT--GGATTGCTTTTCTGACCTGTGGAC-TGCGCAGA-CCC----TGCAGTGG------------TGCTAAAGGACCAGACCTGTGTCTTCTCTTTCT-CT--CTCTCAGTGTCATCTTTCTGATCCCTGGCAGGGCTG-AAAATAAAAAATGTATTTGTTGTGGA-TT-------------------------TCAAAA--- i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 211511 200 + 306014 -AATGAGTCAGAGAGAG----AGAGATA--CACA--TCTGCCTC--GTT---------------TGATGTGACTTTCCT--GGATTGCTTTTCTGACCTGTGGGC-TACGGAGACCCC----TGCAGTGG------------TGCTAAAGGACCAGACCTGTGTCT--TCTCTTT-CT--CTCTCAGTGTCATCTTTCTGATCCCTGGCAGGGCTG-AAAATAAAAAATGTATTTGTTGTGGG-TT-------------------------TTAAAA--- i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 73661 211 + 211231 -AATGAGTCAGAGAGAG----------ACTCACA--TCTGCCTCTAGTTTGATGTGACTCGTCGTGATGTGACTTTCCT--GGATTGCTTTTCTGACTTGTGGGC-TACGGAGACCCC----TGTAGTGG------------TGCTAAAGAACCAGACCCGTGTCT--TCTTTTT-CT--CTCTCAGTGTCATCTTTCTGATCCCTGGCAGGGATG-AAAAT-AAAAATGTATTTGTTGTGGG-Gt-------------------------tt-ttt--- i aotNan1.NW_018494784v1 I 1 C 0 s otoGar3.GL873745 40512 219 + 2165740 -AATGAATCTGAGAGATAGACACACACA--CAGA--TCTCCCTTTCATCCTAGGTGATGCTGCTGA----ATTCTTTTT--GGATTGCTTTTCTGACTTATGAA--------------------------------------TACTGAAGAACCAGACCCTTTTTT--CCCCCTC-TTTGCTGTCGGTA-------TCTCATTCCTGGCAGGGATGAAAAACAAAAAATGTATTTGTTGGGGC-TTTTGTAGTTTAATTGTTTTGGTAATGtt-tttttg i otoGar3.GL873745 I 1 I 1 s canFam3.chr34 30172455 209 - 42124431 AAGTGAATCAGAGAAGG----------A--GAGA--TGAGTCTC----------------ATTCTG----GACTTTCTTTCTGATTGCTTTTCTGATCTATCAACTGAGGGACACCACACTTTATGGCAGTACCACCCACCTTGCTACAGAACCAGATCTGTTTTT--TCTCTTTGCT--CTGTCAGTATATTTTTTCTGATCCCTGACA--GATG-AAAAATAAAAATG---TTTAAGTAGT-TT-------------------------TG-CTTCTT i canFam3.chr34 C 0 I 4 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=85384.000000 s hg38.chr3_KI270779v1_alt 40358 10 + 205312 aatttgttta s gorGor5.CYUI01015759v1 865035 10 - 880730 aatttgttta i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206054 10 + 180051392 aatttgttta i rheMac8.chr6 I 3 C 0 s macFas5.chr6 180270526 10 - 181584905 aatttgttta i macFas5.chr6 I 3 C 0 s macNem1.NW_012013899v1 31358 10 - 100774 aatttgttta i macNem1.NW_012013899v1 I 3 C 0 s cerAty1.NW_012004452v1 189473 10 + 218577 aatttgttta i cerAty1.NW_012004452v1 I 3 C 0 s chlSab2.chr4 89602925 10 - 91010382 aatttgttta i chlSab2.chr4 I 3 C 0 s manLeu1.NW_012101728v1 8339 10 - 74206 aatttgttta i manLeu1.NW_012101728v1 I 5 C 0 s colAng1.NW_012116910v1 883529 10 + 1687011 aatttgttta i colAng1.NW_012116910v1 I 837 C 0 s calJac3.chr2 149352 10 - 204313951 AAtttgttta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111507 10 - 16417988 AAtttgttta i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 211711 10 + 306014 AAtttgttta i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 73872 10 + 211231 aatttgttta i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 40732 10 + 2165740 tgtttgtttt i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 30172668 10 - 42124431 Gatttattta i canFam3.chr34 I 4 I 531 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=554418.000000 s hg38.chr3_KI270779v1_alt 40368 86 + 205312 gagatggggtcttgctctgttgcccaggc----tggagtgcagtggagcaatcttgactcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaacg s gorGor5.CYUI01015759v1 865045 86 - 880730 gagatggggtcttgctctgttgcccaggc----tggagtgcagtggagcaatcttgactcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaacg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206064 86 + 180051392 gagacggggtcttgctctattgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180270536 86 - 181584905 gagacggggtcttgctctgttgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31368 83 - 100774 gagacggggtcttgctctatt---caggc----tggagtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 189483 86 + 218577 gagacggggtcttgctctgttgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaagg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89602935 86 - 91010382 gagacggggtcttgctctattgcccaggc----tggggtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaagg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8349 86 - 74206 gagacggggtcttgctctgttgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaagg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 883539 86 + 1687011 gtgacggggtcttgctctgttgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcc--------------------------------------------------------------------------------------------tttgt----------------------------------------ctcccaggctcaaaga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 149362 88 - 204313951 gagatagggtcttgctctgtt--ccaggctggatggagtgcagtggagcagtcttgtctcaccgcagcc--------------------------------------------------------------------------------------------agtgc----------------------------------------ctcccggactcaaaca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111517 86 - 16417988 gagatagggtcttgctctgttgcccaggc----tggagtgcagtagagcaatcttggctcactgcagcc--------------------------------------------------------------------------------------------agtgc----------------------------------------ctcccagactcaaaca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 211721 86 + 306014 gagatagggtcttgctctgttgcccaggc----tggagtgcagtggagcaatcttggctcactgcagcc--------------------------------------------------------------------------------------------agtgc----------------------------------------ctcccagactcgaaca i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 73882 86 + 211231 gagatagggtcttgctctgttgcccaggc----tggagtgcagtggagcaatcttggctcactgcagcc--------------------------------------------------------------------------------------------agtgc----------------------------------------ctcccagactcagaca i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 40742 218 + 2165740 taaatggggttttgctctgttgcctaggc----tagagtgcagtggtgcagttatagctcactgtaacctcagacatctggtttccagtgatcctgcctcagcctcctgagtagctgggactatagttgtttatcaccatatccagctaattttttaacattttgtggagatggggtctccctaggttgctcaggctattcttaaactcctggcctcaagca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172678 531 - 42124431 I e panPan2.chrUn_NW_014024201v1 10152 20 + 190779 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200027651 20 + 202621043 I a score=606844.000000 s hg38.chr3_KI270779v1_alt 40454 75 + 205312 atccttgcacctcagcctcccaaatagctgggactacaggcatgtgttaccatgcccagc----------------------------taatttttg------aggg-tt s panTro5.chr3 200027671 75 + 202621043 atccttccacctcagcctcccaaatagctgggactacaggcatgtgttaccatgcccagc----------------------------taatttttg------aggg-tt i panTro5.chr3 I 20 C 0 s panPan2.chrUn_NW_014024201v1 10172 75 + 190779 atccttccgcctcagcctcccaaatagctgggactacaggcatgtgttaccatgcccagc----------------------------taatttttg------aggg-tt i panPan2.chrUn_NW_014024201v1 I 20 C 0 s gorGor5.CYUI01015759v1 865131 76 - 880730 atccttccacctcagcctcccaaacagctgggactacaggcatgtgttaccatgcccatc----------------------------taatttttg------agggttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206150 75 + 180051392 atccttccacctcagcctcccaaacggctgggactacaggcatgtgttaccacgcccggc----------------------------taatttttg------aggg-tt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180270622 75 - 181584905 atccttccacctcagcctcccaaacggctgggactacaggcatgcgttaccacgcccggc----------------------------taatttttg------aggg-tt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31451 75 - 100774 atccttccacctcagcctcccaaacggctgggactacaggcatgcgttaccacgcccggc----------------------------taatttttg------aggg-tt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 189569 75 + 218577 atccttccacctcagcctcccaaacggctgggactacaggcatgcattaccatgcctggc----------------------------taatttttg------aggg-tt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603021 75 - 91010382 atccttccacctcagcgtcccaaacggctgggactacaggcatgcgttaccatgcccagc----------------------------taatttttg------aggg-tt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8435 75 - 74206 atccttccacctcagcctcccaaacggctgggactacaggcatgcattaccatgcctggc----------------------------taatttttg------aggg-tt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 883625 75 + 1687011 atccttccacctcagcctcccaaacggctgggactacaggcatgcgttaccatgcccagc----------------------------taatttttg------aggg-tt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 149450 75 - 204313951 atccttccacctcagcctcccaaacagctgagactacaggcatacattaccatgcccagct--------------------------ttattttttt------a--t-tt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111603 69 - 16417988 atccttccacctcagcctcccaaacagctgagactacaagcatgcgttatcatgcccagc----------------------------taattt------------t-tt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 211807 71 + 306014 atctttccacctcagcctcccaaacagctgagactacaggcatgcgttaccatgcccaga----------------------------taattttt----------t-tt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 73968 69 + 211231 gtccttccacctcagcctcccaaacagctgagacgacaggcatacattaccatggccagc----------------------------taattt------------t-tt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 40960 109 + 2165740 gtcatcctgcctcagcttcccaaagtgctaggatttcagtcatgagtcaacacacccagtcTGTTGGattatttgttgttattattattatttttttttggccaggg-ct i otoGar3.GL873745 C 0 I 144 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172678 531 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1136852.000000 s hg38.chr3_KI270779v1_alt 40529 134 + 205312 tttttg-tttttggtagagacagggtgtcaccattttaagcccaggctgg----------------------------tctcaaacgccagggcttaggcgatcctcctgcctcggcccctcagggtgctggcattatagccatgagccactgcacccggccT s panTro5.chr3 200027746 134 + 202621043 tttttg-tttttggtagagacagggtgtcaccattttaagcccaggctgg----------------------------tctcaaacgccagggcttaggcgatcctcctgccttggcccgtcaaggtgctggcattatagccatgagccactgcacccggccT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10247 134 + 190779 tttttg-tttttggtagagacagggagtcaccattttaagcccaggctgg----------------------------tctcaaacgccagggcttaggcgatcctcctgccttggcccgtcagggtgctggcattatagccatgagccactgcacccggccT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865207 134 - 880730 tttttg-tttttggtagagacagggtgtcaccattttaagcccaggctgg----------------------------tctcaaatgccagggcttaggtgatcctcctgcctaggcccctcagggtgctgggattatagccatgagccactgcacccggccT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206225 132 + 180051392 gttttg-tttttggtagagatggggtgtcaccgtttt--gcccaggctgg----------------------------tctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacctggtcT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180270697 132 - 181584905 gttttg-tttttggtagagatggggtgtcaccgtttt--gcccaggctgg----------------------------tctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacctggtcT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31526 132 - 100774 gttttg-tttttggtagagatggggtgtcaccgtttt--gcccaggctgg----------------------------tctcaaactccagggcttaggcgatcctcctgcctcagcccctcagagtgctgggattatagccatgagccactgcacctggtcT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 189644 132 + 218577 gttttg-tttttggtagagacggggtgtcaccgtttt--gcccagactgg----------------------------tctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacccggccT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603096 132 - 91010382 gttttg-tttttggtagagacggggtgtcaccgtttt--gcccaggctgg----------------------------tctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacccggccT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8510 132 - 74206 gttttg-tttttggtagagacggggtgtcaccgtttt--gcccaggctgg----------------------------tctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacctggtcT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 883700 133 + 1687011 gttttgttttttggtagagacggggtgtcaccgtttt--gcccaggctgg----------------------------tctcaaactccagggcttaggcaatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacctggtcT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 149525 132 - 204313951 tttatt-tttttggcagagacatggtttcaccatttt--gcccaggctga----------------------------tctcaaactcctgagcttaaggaatccacctgccccagcctcccagagtgctgggattccaggcatgagccaccgcgcctagccT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111672 132 - 16417988 tttttt-tttttggtagagacagggtttcaccatttt--gcccagactgg----------------------------tctcaaactcctgggcttaagcagtccacctgcctcagcctcccagagtgcagggattacaggcatgagccaccgcccctagccT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 211878 132 + 306014 tttttt-tttttggtagagacagggtttcaccatttt--gcccagactgg----------------------------tctcaaactcctgggcttaagcaatccacctgcctcagcctcctagagtgttgggattacaggcatgagccactgcacttagccT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74037 132 + 211231 ttgttg-ttgttgttagagacagggtttcaccatttt--gcccagactga----------------------------tctcaaactcctgggcttaagcaatccacctgcctcggcctcccagagtgctgggattaccggcatgagccaccgcgcctagccT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 41213 160 + 2165740 tttttc-tttttttttgagacagaatctcagtatgtc--accctgggtagagtgctatggtgtcacagctcacagcaacttcaaactcctgggcttaagcaattctcttgcctcagcctcccaagtagctgggattacaggcgcccaccacaacacccagctg i otoGar3.GL873745 I 144 C 0 e mm10.chr13 46087414 246 - 120421639 I e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172678 531 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=13600.000000 s hg38.chr3_KI270779v1_alt 40663 1 + 205312 G s panTro5.chr3 200027880 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10381 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865341 1 - 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206357 1 + 180051392 G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180270829 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31658 1 - 100774 G i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 189776 1 + 218577 G i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603228 1 - 91010382 G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8642 1 - 74206 G i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 883833 1 + 1687011 G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 149657 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111804 1 - 16417988 G i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212010 1 + 306014 G i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74169 1 + 211231 G i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 41373 1 + 2165740 g i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087660 1 - 120421639 G i mm10.chr13 I 246 C 0 e dasNov3.JH577625 545475 2350 + 913073 I e canFam3.chr34 30172678 531 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1636151.000000 s hg38.chr3_KI270779v1_alt 40664 181 + 205312 TTGTA-TTTT--------TTATTACTGTTTTTAATCAG---CAAAATGTCAGTGAG-CCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAA-CCACAG----AAAAAAGAGCATGGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAAT-CACATTCT s panTro5.chr3 200027881 181 + 202621043 TTGTA-TTTT--------TTATTACTGTTTTTAATCAG---TAAAATGTCACTGAG-CCCCTGACTTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTTCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAA-CCACCG----AAAAAAGAGCATAGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAAT-CACATTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10382 181 + 190779 TTGTA-TTTT--------TTATTACTGTTTTTAATCAG---TAAAATGTCACTGAG-CCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAA-CCACCG----AAAAAAGAGCATGGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAAT-CACATTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865342 181 - 880730 TTGTA-TTTT--------TTATTACTGTTTTTAATCAG---TAAAATGTCACTGAG-CCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTGGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAA-CCACAG----AAAAAAGAGCATGGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAAT-CACATTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206358 184 + 180051392 TTGTATTTTT--------TTATTACTTTTTTTAATCAA---TAGAATGTCACTGAG-TCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATTTGAGAAGTAATCCACAG---AAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGCAAGATGCAAGAAT-CACATTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180270830 184 - 181584905 TTGTATTTTT--------TTATTACTTTTTTTAATCAA---TAGAATGTCACTGAG-TCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATCCACAG---AAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGCAAGATGCAAGAAT-CACATTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31659 184 - 100774 TTGTATTTTT--------TTATTACTTTTTTTAATCAA---TAGAATGTCACTGAG-TCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATCCACAG---AAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGCAAGATGCAAGAAT-CACATTCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 189777 183 + 218577 TTGTATTTTT--------TTATTACTTTTTTTAATCAA---TAGAATGTCACTGAG-TCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATCCGCAG----AAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGCGAGATGCAAGAAT-CACATTCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603229 183 - 91010382 TTGTATTTTT--------TTATTACTTTTTTTAATCAA---TAAAATGTCACTGAG-CCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATCCACAG----AAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGTGAGATGCAAGAAT-CACATTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8643 183 - 74206 TTGTATTTTT--------TTATTACTTTTTTTAATCAA---TAGAATGTCACTGAG-TCCCTGAATTCCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATGCACAG----AAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGCGAGATGCAAGAAT-CACATTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 883834 182 + 1687011 TTGTA-TTTT--------TTATTACTTTTTTTAATCAA---TAAAATGTCACTGAG-CCTCTGAATTCCC---TC-TGTAATTTGT----------------------------------TTAGAGCTCTACTTCTCGTGCTTTGTCTTCAATATGTGAGAAGTAATCCACAG----AAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGTGAGATGCAAGAAT-CACATTCT i colAng1.NW_012116910v1 C 0 M 6480 s calJac3.chr2 149658 183 - 204313951 TG----TTTA--------TTATTACTGTTTTTAACCGA---TCAAATGTCACTGAC-CTCCTGAATTTCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGCTATCCACACAAAAAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGGCAGGTGAGATACGAGAAT-CACATTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111805 177 - 16417988 TG----TTTT--------TTAATACTGTTTTTAACCAA---TAAAATGTCACTGAC-CTCCTGAATTTCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCAGGCTTTGTCTTCAATATGTGAGGG------CATTGAAAAAAAAAAGAGCATTGAAACTTAGAAAATTAAAAGGCAGGTGAGATGCAAGAAT-CACATTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212011 176 + 306014 TG----TTTT--------TTATTACTGTTTTTAACCAA---TAAAATGTCACTGAC-CTCCTGAATTTCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGGG------CATTG-AAAAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAAT-CACATTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74170 180 + 211231 TG----TTTT--------TTATTACTGTTTTTAACCGA---TAAAATGTCACTGAC-CTCCGGAATTTCC---TC-TGTAATTTGC----------------------------------TTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGAAATCCAC---AAAAAAAAAGAGCAGTAAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAAC-CACATTCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 41374 230 + 2165740 gtttttttttggttgtagttgtcattgtcatttggcaggcccaggctggatttgag-cacacgagctccagtgtg-tgtggctagtaccctagccgctgagcaacagacaccgagccGTATTATACCTCCATTTCTTATGTTTCTTTTCCAGTGTATGAGAAATAAACCACC-----AAAAAATACCATTGAAACTAGGAAAACTGGAAGGCAGATGAAATGCAAGAAT-TTCATTCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087661 153 - 120421639 TTAGT-TTTC--------TTACTTCAGTTTCTGTCTAG--------TGTCTCTGAG-CCTCTGGAGCCAG---TCACATACTGTGT----------------------------------TTAGCACTTCATTTCTTATACTTTCTTTACAATATATAAAAA-TAAACTACCC----GACAGATGTTACTGAAGCTATGAAAAGTGAAAAGCA------------------------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 547825 179 + 913073 ttgta-tttt--------ttattactatttttattcaa---taaaatCTCATTGAGACTTGTGAATTCCC---TC-TA------GT----------------------------------TTAGCACCACCTTTCTTATACTTCCTCTTCAATGTTTGAGAAACAAGCTGCTA---AAAAAAATGCCAGTGAAATTAGGACAATTGACAGGCAGATAAAATGCAAGAACATTCATTCC i dasNov3.JH577625 I 2350 C 0 e canFam3.chr34 30172678 531 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=489014.000000 s hg38.chr3_KI270779v1_alt 40845 56 + 205312 TGTCTTGAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA s panTro5.chr3 200028062 56 + 202621043 TGTTTTGAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10563 56 + 190779 TGTTTTGAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865523 53 - 880730 TATTTTGAAAGCAAGATTGCCCTTTTTGTA---TAATAAAAATTGTAGCTTTTGAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206542 56 + 180051392 CGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271014 56 - 181584905 CGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31843 56 - 100774 CGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 189960 56 + 218577 TGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603412 56 - 91010382 CGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8826 56 - 74206 TGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 149841 56 - 204313951 TGTTTTAAAAGCAAGATTGCCCTTTTTGTATTCTAATACAAATTGTAGCTTTTGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 111982 55 - 16417988 TGTTTTAAAAGCAAGATTCCCCTTTTT-TATTCTAATACAAATTGTAGCTTTTGAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212187 54 + 306014 TGTTTTAAAAGCAAGATT-CCCTTTTT-TATTCTAATACAAATTGTAGCTTTTGAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74350 56 + 211231 TGTTTGAAAAGCAAGATTGCCCTTTTTGTATTCGAATACAAACTGTAGCTTTTGAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 41604 56 + 2165740 TGCTTTAAAAGCAAGATAACCCTTTTGTTGTACTAATGAAAGTATTAGCTTTTGAA i otoGar3.GL873745 C 0 I 301 s mm10.chr13 46087814 51 - 120421639 --CTTTTAGAGCATG--TAACCTTTTGGCATATGAAAGGAAAAC-TGGCTTTAAAA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 548004 52 + 913073 TGTTTT-AAAGTAAG---GCACTTTTGGTATAGTAATGAAAGTTTTTGCTTTCAAA i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30172678 531 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=212993.000000 s hg38.chr3_KI270779v1_alt 40901 35 + 205312 -ATACATTTAGTTTAGGG------------TTTTTGATCTCCTTTGTT s panTro5.chr3 200028118 35 + 202621043 -ATACATTTAGTTTAGGG------------TTTTTGATCTCCTTTGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10619 35 + 190779 -ATACATTTAGTTTAGGG------------TTTTTGATCTCCTTTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865576 35 - 880730 -ATACATTTAGTTTAGGG------------TTTTTGATCTCCTTTGTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206598 35 + 180051392 -ATACGTTTACTTTCGGG------------TTTTTGATCTCCTTTGTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271070 35 - 181584905 -ATACGTTTACTTTCGGG------------TTTTTGATCTCCTTTGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31899 35 - 100774 -ATACGTTTACTTTCGGG------------TTTTTGATCTCCTTTGTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190016 35 + 218577 -GTACGTTTAGTTTCGGG------------TTTTTGATCTCCTTGGTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603468 35 - 91010382 -ATACGTTTAGTTTCGGG------------TTTTTGATCTCCTTTGTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8882 35 - 74206 -GTACGTTTAGTTTCGGG------------TTTTTGATCTCCTTGGTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 149897 47 - 204313951 -ATACATTCAGTTTAGGGTTTTTTTGTGGGTTTTTGATCTCCTTTGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 112037 46 - 16417988 -ATACATTTAGTTTAGAG-GTTTTGGTGGGTTTTTGATCTCCTTTGTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212241 46 + 306014 -ATACATTTAGTTTAGGGGGTTTTTGTGGG-TTTTGATCTCCTTTGTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74406 47 + 211231 -CTACATTTAGTTTAGGGGTTTTTTGTGGGTTTTTGATCTCGTTTGTT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46087865 25 - 120421639 -------TAACCCT----------------TACTTAGTCTCTTCCCTT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 548056 31 + 913073 CTGATAGTAAATT-----------------GCTTTGGTCTCCTTCACC i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 41660 301 + 2165740 I e canFam3.chr34 30172678 531 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=415856.000000 s hg38.chr3_KI270779v1_alt 40936 54 + 205312 AAAATTCGAGAGCTTGGCACGCCCTGTTTCTCATCGCACTGAGGAGTCACAGAG s panTro5.chr3 200028153 54 + 202621043 AAAATTCGAGAGCTTGGCACGCCCTGTTTCTCATCGCACTGAGGAGTCACAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10654 54 + 190779 AAAATTCGAGAGCTTGGCACGCCCTGTTTCTCATCGCACTGAGGAGTCACAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865611 54 - 880730 AAAATTCGAGAGCTTGGCACGCCCTGTTTCTCATCGCACTGAGGAGTCACAGAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206633 54 + 180051392 AAAATTAGAGAGCTAGGCATGCCCTGTTTCTCATCGCCTTGAGGAGTCACAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271105 54 - 181584905 AAAATTAGAGAGCTAGGCATGCCCTGTTTCTCATCGCCTTGAGGAGTCACAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31934 54 - 100774 AAAATTAGAGAGCTAGGCATGCCCTGTTTCTCATCGCCTTGAGGAGTCACAGAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190051 54 + 218577 AAAATTCGAGAGCTAGGCATGCCCTGTTTCTCATCGCCTTGAGGAGTCACAGAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603503 54 - 91010382 AAAATTAGAGAGCTAGGCATACCCTGTTTCTCATCGCATTGAGGAGTCACAGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8917 54 - 74206 AAAATTCGAGAGCTAGGCATGCCCTGTTTCTCATCGCCGTGAGGAGTCACAGAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 149944 54 - 204313951 AAAATCTGAGCGCTCAGCATGCCCAGGTTTTCATGGCGTCGAGGAGTCACAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 112083 53 - 16417988 AAAATCTGAGCGCTCGGCATGCCCTGGTTTTCAT-GCGTTGAGGAGTCACAGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212287 54 + 306014 AAAATCTGAGCGCTCGGCATGCCCCGGTTTTCATCACGCTGAGGAGTCACAGAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74453 54 + 211231 AAAATGTGAGCGCTCAGCAGGCCCAGGTTTTCATGGCGTCGAGGAGTCACAGAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 41961 51 + 2165740 aaaaCTCAAGGGCTTGGCATTTCTTCTTTGTCATGACATTAAGGA---ACACAa i otoGar3.GL873745 I 301 C 0 s mm10.chr13 46087890 52 - 120421639 AAAACTCAATA-CTTGGCATCCCTTGTCTTTCCTTACACTGAAG-GACACAAAA i mm10.chr13 C 0 I 38 s dasNov3.JH577625 548087 50 + 913073 CACATCCAAGAGCCTGGTGCTCCCTG-TCCTCCTCTCACCGAGA---CGCAGAA i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30172678 531 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=678669.000000 s hg38.chr3_KI270779v1_alt 40990 85 + 205312 CCGCTgtttggg-gcacagaccg--ccggactgcccaggtttgggtttgagctctgtcctcagctgcatgac--tggat--gttaccaagcg s panTro5.chr3 200028207 85 + 202621043 CCGCTATTTGgg-gcacagaccg--ccggactgcccaggtttgggtttgagctctgtcctcagctgcatgac--tggat--gttaccaagcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10708 85 + 190779 CCGCTgtttggg-gcacagactg--ccggactgcccaggtttgggtttgagctctgtcctcagctgcatgac--tggat--gttaccaagcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865665 85 - 880730 CCGCTgtttgga-gcacagaccg--ccggactggccaggtttgggtttgagctctgtcctcagctgcatgac--tggat--gttaccaagcg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206687 85 + 180051392 CCGCTgtttgga-gcacagaccg--ccagactgcccaggtttgggtttgagctgtgtcctcaactgcatgac--tggat--gttaccaagcg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271159 85 - 181584905 CCGCTgtttgga-gcacagaccg--ccagactgcccaggtttgggtttgagctgtgtcctcaactgcatgac--tggat--gttaccaagcg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 31988 85 - 100774 CCGCTgtttgga-gcacagaccg--ccggactgcccaggtttgggtttgagctgtgtcctcaactgcatgac--tggat--gttaccaagcg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190105 85 + 218577 CCGCTgtttgga-gcacagaccg--ccggactgcccaggtttgggtttgagctgtgtcctcaactgcatgac--tgaat--gttaccaagcg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603557 85 - 91010382 CCGCTgtttgga-gcacagaccg--ccggactgcccaggtttgggtttgagctgtgtcctcaactgcatgac--tggat--gttaccaagcg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 8971 85 - 74206 CCGCTgtttgga-gcacagaccg--ccggactgcccaggtttgggtttgagctgtgtcctcaactgcatgac--tgaat--gttaccaagcg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 149998 84 - 204313951 CCGCTgtttgga-gcacacaccg--ccgggctgcccaggttggggtttgaactctgtcctcagctgcatgac--tggat--gttacc-agca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 112136 84 - 16417988 CCGCTgttcgga-gcacagacca--ccggactgcccaggttggggtttgagctctggcctcagctgcatgac--tggat--gttacc-agca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212341 84 + 306014 CCGCTgtttgga-gtacagaccg--caggactgcccaggttggggtttgagctctgtcctcggctgcatgac--tggat--gttacc-agca i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74507 84 + 211231 CCGCTgtttgga-gcgcagagcg--ccggactgcccggactggggtttgacctctgtcctcagctgcatgac--tggat--gttacc-agca i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 42012 86 + 2165740 ttgtgattgaaa-acatag---g--ccatattgcttaggtttgagtttggagtctgtcttcagctgcataactatgggtgggttgctaaact i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 548137 74 + 913073 ---CTGTCAGAGTGCACAGAGGGGCCTTGGCTGCCC--GCCTGCTCTTGGACTCTGTCCTC--CTGTGTGCC--TGGAC--------AAAC- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46087942 38 - 120421639 I e canFam3.chr34 30172678 531 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1005251.000000 s hg38.chr3_KI270779v1_alt 41075 163 + 205312 ttaatttgcttgtcactgagaaagggggtcatactacccagagttgttg-taagacttaaatgagtttaatatgtggaaagcagctagaactgcccatagcaagtgcagtgtaaagatgaactaaaataatcattattactGTTCTTGCCACTGTTTGGGTAAC s panTro5.chr3 200028292 163 + 202621043 ttaatttgcttgtcactgagaaagggggtcgtactacccagagttgttg-taagacttaaatgagtttaatatgtggaaagcagctagaactgcccatagcaagtgcagtgtaaagatgaactaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10793 163 + 190779 ttaatttgcttgtcactgagaaagggggtcgcactacccagagttgttg-taagacttaaatgagtttaatatgtggaaagcagctagaactgcccatagcaagtgcagtgtaaagattaactaAAATAATCGTTATTACTGTCCTTGCCACTGTTTGGGTAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865750 163 - 880730 ttaatttgcttgtcactgagaaagggggtcgtactacccagagttgttg-taagacttaaatgagtttaatatgtggaaagcagctagaactgcccatagcaagtgcagtataaagattaactaAAATAATCATTATTACTGTCCTTGCCACTGTTTGGGTAAG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206772 158 + 180051392 gtaatttgc-tgtcactgagaaagcgggtagtactacccagagttgttg-taagacttaaatgagtt----atgtggaaagcagctagaactgcccctagcaagtgcagtgtgaatattaagtaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271244 158 - 181584905 gtaatttgc-tgtcactgagaaagcgggtagtactacccggagttgttg-taagacttaaatgagtt----atgtggaaagcagctggaactgcccctagcaagtgcagtgtgaatattaagtaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32073 153 - 100774 gtaatttgc-tgtcactgagaaagcgggtagtactacccggagttgttg-taagacttaaatgagtt----atgtggaaagcagctagaactgcccc-agcaagtgcagtgtgaatattaacta----aatcattATTACTGTCCTTGCCACTGTTTGGGTAAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190190 161 + 218577 gtaatttgc-tgtcactgagaaagcgggtagtactacccggagttgttg-taagacttaaatgagtt-aacatgtggaaagcagctagaactgcccctagcaagtgcagagtgaatattaagtaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603642 160 - 91010382 gtaatttgc-tgtcaatgagaaagtgggtagtactacccggagttgttg-taagacttaaatgagtt-aacatgtggaaagcagctagaactgcccc-agcaagtgcagtgtgaatattaactaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9056 161 - 74206 gtaatttgc-tgtcactgagaaagcgggtagtactacccggagttgttg-taagacttaaatgagtt-aacatgtggaaagcagctagaactgcccctagcaagtgcagagtgaatattaagtaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 150082 152 - 204313951 ttaatgtgcttgtcagtgagaatgggggtcctactacctgga---gttg-taaagcttaaatgagtt-aataggcggaaagcagctagaactgtccatggcaaatGCAGTGT----ATTAACTAGAATAATT---GTTACTGACCTTGCCACTGTTTGGGTAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 112220 132 - 16417988 tgaatgcgcttgtcagtgacaatgagggtcatactgcctgga---gctg-taatgcttaaatgagtt-aatactcggaaagcagttagaaccgttcatggcaagtaCAGTGT----ATTAACTAGAATAAT-----------------------CTTGGGTAAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212425 152 + 306014 ttaatgtgcttgtcagtgagaatgggggccatactgcctgga---gctg-taaagcttaaat--gtt-aattttcggaaagcagttagaactgtccatggcaAGTGCAGTGT----ATTAACTAGAATAATT-TCGTTACTGTCCTTGCCACTGTTTGGGTAAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74591 154 + 211231 ttattgtgcttgtcagtgagaatggcggtcataccacccaga---gttg-taaagcttaaatgagtt-aatacgcggaaagcagctagagctgcccgtggcaAGTGCAGTGT----ATTAACTAGAGTAATCATTGTTACTGTCCTTGCCACTGTTT-GGTAAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 42098 160 + 2165740 ttaatttgtttttctctgagaatg--gataatagtacctagggttcttgttaaagcttaaatgagtt-aatata-gcaaagcagctagaactgtccctagcaagtacaatataagtgttaactatAGCAGTAATAATTATTGTCCTTGCTGCTATTTGGGTACT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46087980 120 - 120421639 TTTTTTTTTTTGCCTCTGAGGATAGACTTCTTAGTACCC------ATCA-TAGACATGAAATGAGTA-AATGTTTAGA------------CT------------TGAAACATAAATACTAACCATTAAAATAATTTTTGCTG------------TTTCAGGACT i mm10.chr13 I 38 C 0 s dasNov3.JH577625 548211 120 + 913073 -TAGTGCAC-------------TGGGGGTGGTTCT-------GTGGACA-TGGGGGTGA---GTGTT-AATATATGTGCATCAGTTAGAATTGTACATAGCAAGGACAG-GTAAGCAGTAAC------GATAATTGTTGTTATCTTGGTTACT----------- i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30172678 531 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=5280828.000000 s hg38.chr3_KI270779v1_alt 41238 568 + 205312 TTAGATATGAATTCTCCAAGCTAGT--ATTCTTAACTA------GTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAACG-----------------------TACACCGGGCTGTAATCAGAGTATT--GGCCAGAGGTCTGT----------G----------GGC---------------CGGCCTTTCTCCTCTCTGGGGACGCCACTCTGCCCCAGCCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TGTTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTTGTCTCTCCCCCAAAAAATATCTTGT-AAAAAAAAGTAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATG--TG-----T-------GGTTTTTTGCAGGCACATATGGTGCTGGTTGTCTCATT-ACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGCGAAGGAAGGTGCGTGT-G s panTro5.chr3 200028455 568 + 202621043 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAGCG-----------------------TACACCAGGCTGTAATCAGAGTATT--GGCCAGAGGTCTGT----------G----------GGC---------------CGGCCTTTCTCCTCTCTGGGGACGCCACTCTGCCCCAGCCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCATAACTGTT--------CTTTC-TGTTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTAGTCTCTCCCCCAAAAAATATCTTGT-AAAAAAAAATAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATG--TG-----T-------GGTTTTTTGCAGGCACATATGGTGCTGGTTGTCTCATT-ACGGAAGGATGTTGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGTGAAAGGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGCGAAGGAAGGTGCGTGT-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 10956 568 + 190779 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAACG-----------------------TACACCAGGCTGTAATCAGAGTATT--GGCCAGAGGTCTGT----------G----------GGC---------------CGGCCTTTCTCCTCTCTGGGGACGCCGCTCTGCCCCAGCCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TGTTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTAGTCTCTCCCCCAAAAAATATCTTGT-GAAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATG--TG-----T-------GGTTTTTTGCAGGCACGTATGGTGCTGGTTGTCTCATTAACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGCGAAGGAAGGTGCGTGT-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 865913 567 - 880730 TTAGATATGAATTCTCCAAGCTAGT--ATTCTTAACTA------GTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAACA-----------------------TACACCAGGCTGTAATCAGAGTATT--GGCCAGAGATCTGT----------G----------GGC---------------CGGCCTTTCTCCTCTCTGGGGACGCCACTCTGCCCCAGCCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTGTCTTAACTGTT--------CTTTC-TGTTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTTGTCTCTCCCCCAAAAAATATCTTGT-AAAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATG--TG-----T-------GGTTTTTTGCAGGCACATATGGTGCTGGTTGTCTCATT-ACGGAAGGATGTCATGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACCCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGCGAAGGAAGGTGCGTGT-G i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 206930 567 + 180051392 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTTACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAGCG-----------------------TACACTGGGCTGTAATCAGAGTATC--GGCCAGAGGTCTGT----------G----------GGC---------------TGGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCCATCAGCCTCGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCAAAAAA-ATCTTG--AAAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-----T-------GGTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATT-ACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATATGCCCCCGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGT-G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271402 567 - 181584905 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTTACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATGCAGCG-----------------------TACACTGGGCTGTAATCAGAGTATC--GGCCAGAGGTCTGT----------G----------GGC---------------TGGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCTGTCAGCCTCGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCAAAAAA-ATCTTG--AAAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-----T-------GGTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATT-ACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGT-G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32226 567 - 100774 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTTACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAGCG-----------------------TACACTGGGCTGTAATCAGAGTATC--GGCCAGAGGTCTGT----------G----------GGC---------------TGGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCTGTCAGCCTCGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCCAAAAA-ATCTTG--AAAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-----T-------GGTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATT-ACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCGTGGCGAAGGACCTAGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGT-G i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190351 562 + 218577 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTTACCACAGTGTCATAGTGCAAAAGAGTGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAGCG-----------------------TACACGGGGCTGTAATCAGAGTATC--GGCCAGAGGTCTGT----------G-----------------------------GGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCTGTCAGCCTCGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCAAAAAATATCTTG----AAAAAA-TAATGCATTTGAAATAGAGTCCTAGCAATTGTTAGGTTATAAATGTTTG-----T-------GGTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATC-ACGGAAGGATGTCGTGGAGAGGGCGGCATTCTCATTAACAGTCAAGGCGAAAGGTTCATGGAGCGATACGCCCCCGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGT-G i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89603802 567 - 91010382 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTTACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAGCG-----------------------TACACTGGGCTGTAATCAGAGTATC--GGCCAGAGGTCTGT----------G----------GGC---------------TGGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTTCAGCTGTCAGCCTCATCAGTGCTTTTTGTTATCCAGACTTTCTACTGTGTCTTAACTATT--------CTTTC-TATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCAAAAAATATCTTG---AAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-----T-------GGTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATT-ACGGAAAGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGT-G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9217 559 - 74206 TTAGATATGAATTCTCCAAGCTCGT--ATTCTTAACTA------GTTACCACAGTGTCATAGTGCAAAAGAGTGTTCAAAAATTAAAACAAA------ATTTG-AGGCATCCAGCG-----------------------TACACGGGGCTGTAATCAGAGTATC--GGCCAGAGGTCTGT----------G-----------------------------GGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCTGTCAGCCTCGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTGTT--------CTTTC-TATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCTTCTCTCCCCCAAAAAATATCTTG---AAAAAAA-TAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-----T-------GGTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATC-ACGGAAGGATGTCGTGGAGAGGGCGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCG----- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 150234 561 - 204313951 TTAGATGTGAATTCTCCAGGCTGGT-TATTCTTAACTAAAGTA-GTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACCAA------ATTGG-AGGCATTTAAC------------------------CACAGCAGGCTGCAATCCAAGTAT---GGCCACAGCTCTGT----------G----------GGC-----------------TCCGTTCTGCTCGCTGGGGACTCCGCTCTGCCCAGAC--CTGCTGCA-CCGTCAGCCCTGTCAGTGCTCCTTGGTATCCAGACTTCCTACTGTATCTTAACTTTT-----CTTCTTTC-TATTCAGTTTT----GCATATGATGCCTTCTGCCTATC--CTTCCTCTCTACCGT-AAAAATACCTTG---AAAAAAA----TGTGTTTGAAATAGAGACCTAGCAATTGTTGAGTTATAAATGTTTG-----T--------GTTTTTTTCAGGCATCTATGGTGCTGGGTGTCTCATC-ACAGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAGGGCGAAAGGTTTATGGAGCGATACGCCCCCGTTGCGAAGGACCTGGCATCCAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCCGCGAAGGAAGGTCTGTAT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 112352 565 - 16417988 TTAGATGTGAATTCTCCAGCCTGGT-TATTCTTAACTAAAGTA-GTCACCACAGTATCATAGTGCAAAAGAATGCTGAAAAATTAAAATCAC------ATTTG-AGGCATTTAAC------------------------CGCACCAGGCTGTACTCAGAGTAC---AGCCAGAGCTCTGA----------G----------GGC---------------TGTCCTTTCTGCTCACTGGGGA---CGCTCTGCCCAGAC--CTGCTGCA-CCGCCAGCCTCGTCGGTGCTTTTTGGC-TCCAGACTTTCTACTGTATCTCAACTTTT-----CTTCTTTC-TATTCAGTTTT----GCATATGATGCCTTCTGCATATCTTTTTCCTCTCTACTGCAAAAAATACCTTG---AAAAAAA-TAGTGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-----T--------GTTTTTTTCAGGCATATATGGTGCTGGTTGTCTCATC-ACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAGGGCGAAAGGTTTATGGAGCGATACGCCCCCGTCGCAAAGGACCTGGCGTCCAGAGACGTGGTGTCTCGGTCCATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGT-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 212577 568 + 306014 TTAGATGTGAATTCTCCAGGCTGGT-TATTCTTAACTAAAGTA-GCCACCACAGTGTCATAGTGCAAAAGAATGCTCAAAAATTAAAACCAA------ATTTG-AGGCATTTAAC------------------------CACA-CAGGCTGTAATCCGAGTGT---GGCCAGAGCTCTGT----------G----------GGC---------------TGTCCTTTCTGCTCGCTGGGGACTCCGCTCTGCCCAGAC--CTGCTGCA-CCGTCAGCCTTGTCAGTGCTTCTTGGTATCCAGACTTTCTACTGTATCTTAACTTTT-----CTTCTTTC-TATTCAGTTTT----GCATATGATGCCTTCTGCATATCTTTTTCCTCTCTACCGCAAAAAATATCTTG---AAAAAAA-TAATGCATTTGAAATGGAGACCTAGCAGTTGTTAGGTTATAAATGTTTG-----T--------GTTTTTTTCAGGCATATATGGTGCCGGTTGTCTCATC-ACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAGGGCGAAAGGTTTATGGAGCGATACGCCCCCGTCGCGAAGGACCTGGCGTCCAGAGACGTGGTATCTCGGTCCATGACTCTGGAGATCCGCGAAGGAAGGTCTGTGT-- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 74745 568 + 211231 TTAGATGTGAATTCTCCAGGCTGGT-GATTCTTAACTAAAGTG-GTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAACACCAA------ATTTG-AGGCATTTAAC------------------------CACACCAGGCTGTAGTCCGAGTGT---GGCCAGAGCTCCGC----------G----------GGC---------------CGTCCTTTCTGCTCGCCGGGGACTCCGCCCCGCCCAGAC--CCGCTGCA-CCGTCAGCCTTGTCAGTGCGT-TTGGTATCCGGACTTTCTACTGTATCTTAGCTTTT-----TTCCTTTC-TATTCAGTTGT----GCATATGATGCCTTCTGCGTATCTTTTTCCTCTCTACCAC-AAAAATATCTTG---CAAAAAA-TAATGCCTTTGAATTAGAGACCTAGCAATTGTCAGGTTATAAATGTTTA-----T--------GTTTTCTGCAGGCATATATGGTGCCGGTTGTCTCATC-ACGGAAGGATGTCGTGGAGAGGGAGGCATCCTCATTAACAGTCAGGGCGAAAGGTTTATGGAGCGGTACGCCCCTGTCGCGAAGGACCTGGCGTCCAGAGACGTGGTGTCTCGGTCCATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGTG- i aotNan1.NW_018494784v1 C 0 I 96 s otoGar3.GL873745 42258 566 + 2165740 TTAGATATGAATTTTCCAAGCTGGT-TATTCTTACCTAAAGTAGGTTACCACAATATCATGGTGCAAAAGAATGATCAAAAATTAAAACAAA------ATTTG-ATACATGTAGCA-----------------------TA---TGGGCTACTGTCAGAGTATT--GAACAGAGCTTTGT----------CCACTAGCCTTGGC---------------AGTCCTTCTTCCTCTTTGGGGACACCACTCTGCCCAGAC-----------CTGTCAGCTTTGTCAGTGCTTTTTGTTATCCACACTTACTCCTGTTACTT--TTTCT--------CTTTCTTACTCATTTTT----GCCTATCATGCTCTTGGCATACCATTTTCCTGTCTCCCCCTAAAAATGTCTTC---AAGAATA----CACATTTGAATTATAGACCTAGCAATCCTTAGGTTATATGTATCTA-----TCT-----ATTTTTTTGCAGGCATATATGGTGCTGGTTGTCTCATT-ACAGAAGGATGCCGTGGAGAGGGAGGCATTCTCATTAACAGTCAGGGCGAGAGGTTTATGGAGCGATATGCCCCTGTCGCGAAGGACTTGGCATCTAGAGACGTTGTGTCTCGATCAATGACTCTGGAGATCCGTGAAGGAAGGTCTGTG--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46088100 525 - 120421639 TAAGATAGAAATTCTCTAAGTTGTTTTATCCCTGCCTAAACTT-GTTATCGCATT-TCTTGGTATAAAGATATATTTAAAAAC----ATTAA------ATCTATAAGCATGGA-------------------------------TGGTGTTTAGTCAGAGTATG--TGTTAGA-CCCTGT----------G----------AGT---------------GAGC---------------------TGCTGTTCCTGAAGCTCTTGTG---CTTTCTGGTTTGTTGCTGCTGCTTGTCACACACA-TTCCTTCTCCTACTTGACTTTT--------CTTCT-TA-----TTTT----GAGTTTAATGTTCTTTGTGTCTACT------------CCCAAAAAGTGGCTTCTAAAGAAGGA-TTAACCATTTGAAGTAGTTTCCTAGTGCTCGTTCATTTATAAACATTTAATCATT-------GGATTTTTACAGGTATATACGGTGCTGGCTGCCTCATC-ACAGAAGGGTGTCGTGGAGAGGGGGGGATTCTCATCAACAGTCAAGGTGAAAGGTTCATGGAGAGATACGCACCTGTTGCCAAGGACCTGGCATCAAGAGATGTTGTGTCTCGATCCATGACTCTTGAGATCCGTGAAGGAAGGTCTGTA--- i mm10.chr13 C 0 C 0 s canFam3.chr34 30173209 565 - 42124431 TTAGATACAAACTTTCCAAACTGTT--TTTTTCTAC--------CTCATCACAATTTCTTGGTATAAAACAACATTCTAAAATTAAAAGGAA------GCCTG-AGATATTTAACACGTACTTGGTTGTGTTGAAAGTTCACACATGGTTGTCATCGAAATATT--CAGCCGAGCTATGTCATCACCACGG----------AGC---------------TGAGCTTTCCCCTC---------------------------CTGCTG----------CTTTGTCAGTACTTTTTGTTATCAAAACTTC--ACTCTTCCTTAACCTTT--------CCTTT-GTCTAACTCTTTTAGGAGCACAATGCCCTTTCCATATCTTTTTCCTTTCCCC----AAAAATGTCTTG---AAAAAAA-TT-TGCATTTGAAATACAGACCTAGCAATTGTTAGGTTATAAACATCTA-----ATTAAATGGGTTCTTTGCAGGTATATATGGTGCTGGTTGTCTCATT-ACGGAAGGATGCCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTCATGGAGCGATATGCCCCAGTCGCAAAGGACCTGGCATCCAGAGACGTTGTATCTCGGTCCATGACTCTGGAAATCCGTGAAGGCAGGTGTGTCA-G i canFam3.chr34 I 531 I 36 s dasNov3.JH577625 548331 579 + 913073 TTTGATAGGAATTTTCCAAGCTGTC--CTTCATATCTAAAGTA-GTCTCCACAATTTCATAGTGCAAAAGAACATTGAAAAATTAAAGTTAAAGTAACATTTG-AGATGTTT---------------------------GACACGTGCTTGTGTTTAGAAGTTTGAGGCCCG---TTTGT----------G----------AGCAGTGCTGGCTCGTCCTGGCCGCTCTTCTTGTGGTTGGTGCCACTCCTCC----------------CTGTGAGCCCCATCAGGG-TTTTTGTTTTCAAAATTTCCTACTAT-TCTAATCTTTTGCTTTGTCTTTCT-TATTATGTTTT----TACTATGATGCCTTTTTCATACCCTTTTCCTCTATCCCC--AAACATATCCTG----GAAATA-TTGTGTCTTTGAAATAGAGAC--AGCAGTAGTT-GGTTACAAGTGTTTA-----TTTACTTGGGCTTTTTGCAGGCATTTATGGCGTTGGCTGTCTTATT-ACGGAAGGGTGCCGTGGAGAAGGGGGCATTCTTATTAACAGTCAAGGCGAAAGGTTTATGGAAAGATACGCTCCAGTTGCAAAGGATCTGGCGTCCAGAGACGTCGTATCACGTTCCATGACTGTGGAAATCCGTGAAGGAAGGTTTGTGC-A i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=195285.000000 s hg38.chr3_KI270779v1_alt 41806 32 + 205312 GTTTACCACCAGCACTGTCTGAGC---------GGGCACAC s panTro5.chr3 200029023 32 + 202621043 GTTTACCACCAGCATTGTCTGAGC---------GGGCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11524 32 + 190779 GTTTACCACCAGCATTGTCTGAGC---------GGGCACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866480 32 - 880730 GTTTACCACCAGCATTGTCTGAGC---------GGGCACAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207497 32 + 180051392 ATTTACCACCAGCATTGTCTGAGT---------GGGCACAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180271969 32 - 181584905 ATTTACCACCAGCATTGTCTGAGT---------GGGCACAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32793 32 - 100774 ATTTACCACCAGCATTGTCTGAGT---------GGGCACAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190913 32 + 218577 ATTTACCACCAGCATTGTCTGAGT---------GGGCACAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89604369 32 - 91010382 ATTTACCACCAGCGTTGTCTGAGT---------GGGCACAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9776 17 - 74206 ---------------TGTCTGAGT---------GGGCACAC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 150795 32 - 204313951 GTTTATCACCAGAGTCGTCTGAGC---------AGGCACAC i calJac3.chr2 C 0 I 66 s saiBol1.JH378155 112917 32 - 16417988 GTTTATCACCAGCGTTGTCTGAGC---------AGGCACAC i saiBol1.JH378155 C 0 I 65 s cebCap1.NW_016108150v1 213145 31 + 306014 GTTTATCACCAGCGTTGTCTGAG----------GGGCACAC i cebCap1.NW_016108150v1 C 0 I 731 s otoGar3.GL873745 42824 34 + 2165740 ATTAATATCCAGAGATGTCTGAAT-------TGGGGCACAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46088625 41 - 120421639 ATTCTCCTTCAGGGATGCAGGAGTGTAGGGGGTGGAAAAAC i mm10.chr13 C 0 C 0 s canFam3.chr34 30173810 32 - 42124431 GGTGGCTGTTGTTGGTGTCTGTAT---------TTTAACAT i canFam3.chr34 I 36 C 0 s dasNov3.JH577625 548910 32 + 913073 GATTTTCTCTGCAGATGTCTGGGC---------ACATACAC i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 75313 96 + 211231 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=133594.000000 s hg38.chr3_KI270779v1_alt 41838 30 + 205312 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTTCAGCA s panTro5.chr3 200029055 30 + 202621043 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTTCAGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11556 30 + 190779 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTTCAGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866512 30 - 880730 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTTCAGCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207529 30 + 180051392 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTCCAGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272001 30 - 181584905 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTCCAGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32825 30 - 100774 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTCCAGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190945 30 + 218577 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTCCAGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89604401 30 - 91010382 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCATCT-------GTGAGTTCCAGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9793 30 - 74206 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTCT-------GTGAGTTCCAGCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 150893 28 - 204313951 ---------------------------------------------------------------GGG-----------------AGGGCGTTGCTTC---------TGAGTTTCAGCA i calJac3.chr2 I 66 C 0 s saiBol1.JH378155 113014 28 - 16417988 ---------------------------------------------------------------GGG-----------------CCGGGGTTGCTTC---------TGAGTTTCAGCA i saiBol1.JH378155 I 65 C 0 s aotNan1.NW_018494784v1 75409 28 + 211231 ---------------------------------------------------------------GGG-----------------CCGCGGTTGCTTC---------CGCGTTTCAGCA i aotNan1.NW_018494784v1 I 96 C 0 s otoGar3.GL873745 42858 50 + 2165740 ---------------------------------------------------------------GGATACAAGTACCTCCTTTTCAGTTGTTACCTCT----TCGGTGACTGTTAACA i otoGar3.GL873745 C 0 I 159 s mm10.chr13 46088666 32 - 120421639 -------------------------------------------------------------------------------------GTGTCCACTTTTCTCTTTGGTAGGCATTAGGT i mm10.chr13 C 0 I 5 s canFam3.chr34 30173842 30 - 42124431 ---------------------------------------------------------------GGG-----------------CTGATGTGGCTTTT-------GTGTGTTTCAGCA i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 548942 95 + 913073 ATAGCCTCCCTTCCTTTTCTCAGCTGTTTGATAGCTATTGTTCCCTTCTACATTCTGACATCCCAG-----------------CAGGTGTTGCTGCT-----TTGTGGTTCTCAGCT i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 213176 731 + 306014 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=84487.000000 s hg38.chr3_KI270779v1_alt 41868 13 + 205312 -CCGCTC--GCCCTCA s panTro5.chr3 200029085 13 + 202621043 -CCACTC--GCCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11586 13 + 190779 -CCACTC--GCCCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866542 13 - 880730 -CCGCTC--GCCCTCA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207559 13 + 180051392 -CCGCTC--GCCCTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272031 13 - 181584905 -CCGCTC--GCCCTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32855 13 - 100774 -CCGCTC--GCCCTCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190975 13 + 218577 -CCGCTC--GCCCTCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89604431 13 - 91010382 -CTGCTC--ACCCTCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9823 13 - 74206 -CCGCTC--GCCCTCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 150921 13 - 204313951 -CTGCCC--GCCCTCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113042 13 - 16417988 -CTGCCC--GCCCTCG i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 75437 13 + 211231 -GGGCCC--GCCCTCG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43067 13 + 2165740 -CTACTA--AACCCTT i otoGar3.GL873745 I 159 C 0 s mm10.chr13 46088703 13 - 120421639 -CTACTT--TTGCACA i mm10.chr13 I 5 I 12 s canFam3.chr34 30173873 13 - 42124431 -CCACGC--ATCATCC i canFam3.chr34 I 1 I 6 s dasNov3.JH577625 549037 16 + 913073 CCCACCCCAGCCCCTA i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 213176 731 + 306014 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=40698.000000 s hg38.chr3_KI270779v1_alt 41881 3 + 205312 CCT s panTro5.chr3 200029098 3 + 202621043 CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11599 3 + 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866555 3 - 880730 CCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207572 3 + 180051392 CCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272044 3 - 181584905 CCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32868 3 - 100774 CCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190988 3 + 218577 CCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89604444 3 - 91010382 CCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9836 3 - 74206 CCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 150934 3 - 204313951 CCT i calJac3.chr2 C 0 I 154 s saiBol1.JH378155 113055 3 - 16417988 CCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 213907 3 + 306014 CCT i cebCap1.NW_016108150v1 I 731 C 0 s aotNan1.NW_018494784v1 75450 3 + 211231 CCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43080 3 + 2165740 CCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46088728 3 - 120421639 CCT i mm10.chr13 I 12 C 0 s canFam3.chr34 30173892 3 - 42124431 GCT i canFam3.chr34 I 6 C 0 s dasNov3.JH577625 549053 3 + 913073 CCT i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1506187.000000 s hg38.chr3_KI270779v1_alt 41884 218 + 205312 TCGTGTGCA---------------------------------GG--------------CACATGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCCGGCAGGCGTCTGTTAGTCTGCGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGACGGA-GTATGGG------------AGAGAGAGACACGCAC-----CCAACCTGAAGTCGGCGTGTGAGCCTT---GGGTGT s panTro5.chr3 200029101 218 + 202621043 TCGTGTGCA---------------------------------GG--------------CACATGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCCGGCAGGCGTCTGTTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGATGGA-GTATGGG------------AGAGAGAGACACACAC-----CCAACCTGAAGTCGGTGTGTGAGCCTT---AGGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11602 218 + 190779 TCGTGTGCA---------------------------------GG--------------CACATGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCCGGCAGGCGTCTGTTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGATGGA-GTATGGG------------AGAGAGAGACACACAC-----CCAACCTGAAGTCGGTGTGTGAGCCTT---ACGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866558 215 - 880730 TCGTGTGCA---------------------------------GG--------------CACATGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCCGGCAGGCGTCTGTTAGTCTGTGATATTTTCCTATAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTA---ATGTGACGGA-GTATGGG------------AGAGAGAGACACGCAC-----CCAATCTGAAGTCGGTGTGTGAGCCTT---GGGTGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207575 218 + 180051392 TCGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTT------------------TCAG---CTGCTGACAGGCGTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTAAAAATTTTAGCCAGT------------TTCTT-----TCTCAGATCTGTGGAACAGAATTT-CTCTTAG--------TGTGGGTGAGTATGTGACAGA-GTACAGG------------AATGAGAGACGCACAC-----GCAACCTGAAGTTGGCACGTGAGCCTC---GGGTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272047 218 - 181584905 TCGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGACAGGCGTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTAAAAATTTTAGCCAGT------------TTCTT-----TCTCAGATCTGTGGAACAGAATTT-CTCTTAG--------TGTGGGTGAGTATGTGACAGA-GTACGGG------------AATGAGAGACGCACAC-----GCAACCTGAAGTCGGCACGTGAGCCTT---GGGTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 32871 232 - 100774 TCGTGTGCA---------------------------------GGCACACGTGCACAGCCACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGACAGGCGTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTAAAAATTTTAGCCAGT------------TTCTT-----TCTCAGATCTGTGGAACAGAATTT-CTCTTAG--------TGTGGGTGAGTATGTGACAGA-GTACGGG------------AATGAGAGACGCACAC-----GCAACCTGAAGTCGGCACGTGAGCCTT---GGGTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 190991 218 + 218577 TCGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGACAGGCGTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTAAAAATTTTAGCCAGT------------TTCTT-----TCTCAGATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGGGTGAGTATGTGACAGA-GTGCGGG------------AGAGAGAGACGCACAC-----GCAACCTGAAGTCGGCACGTGAGCCTT---GAGTGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89604447 218 - 91010382 TCGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGACAGGCGTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAGATCTGTGGAACGGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGACAGA-GTACGGG------------AGAGAGAGACGCACAC-----GCAACCTGAAGTCAGCACGTGAGCCTT---GGGTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 9839 218 - 74206 TCGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGACAGGCGTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAGATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGACAGA-GTGCGGG------------AGAGAGAGACGCACAC-----GCAACCTGAAGTCGGCACGTGAGCCTT---GGGTGT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151091 217 - 204313951 TCGTGTGCA---------------------------------GG--------------CACACGTGCA---TAGC-------------------------------CAC--CTC------------------TCAG---CTACTGGCTGGCATCTGTTAGTCTGTGATATTTACCTAAAGACCTACATTTTGAAAACTTTAGCCAGT------------TTTTT-----TCTCAAATCTGTGGAACATAATTT-CTCTGAG--------TGTGTGTGAGTATGTGATAGA-TTATGGG------------AGAGAGAGACACACGC---TCCCAACCTGAGGTCGGCATGTGAG-CTT---GGCTGT i calJac3.chr2 I 154 C 0 s saiBol1.JH378155 113058 154 - 16417988 TTGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGGCTGGCATCTGTTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAAATCTGTGG------------------------------------------------------------------------------------------AACCTGAGGTTGGCATGTGAG-CTC---GGGCGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 213910 214 + 306014 TCGTGTGCA---------------------------------GG--------------CACATGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CTGCTGGCTGGCATCTGTTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGT------------TTCTT-----TCTCAAATCTTTGGAACATAATTC-CTCTGAG--------TGTGTGTGAGTATGTGATAGA-TGGTGGG------------ACAGAGACACACACCC-------AACCTGAGGTCGGCACGTGAG-CTT---GG-TGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75453 221 + 211231 CCGTGTGCA---------------------------------GG--------------CACACGTGCA---CAGC-------------------------------CACCTCTC------------------TCAG---CCGCTGGCTGGCATCTGCTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGA------------TTCTT-----TCTCAAATCTGTGGAACATAATTT-CTCTGAA--------TGTGTATGAGTATGTGATAGA-TTGTGGG------------AGAGAGACACACACACAC-ACCCATCCTGAGGGCGGCATGTGAG-CTT---GGGTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43083 313 + 2165740 TCCTCCCCACCTATAGAGGTTAATTAAGATTTTCTCTACTGTGG--------------CATATTTACATTTTAGCGTCTAGGCTATTATTTCTGTGTGACTATCAACACCTCTCACCCCAGAGTTAGCTTTGTTAC---TTATTGACTATCTTCTGTTA-TTTGTGATACTTTTCTCAAGACCCACATTTTGAGAATTTAAGCTGGTATTTTAATGTCAATCTT-----TCTCAAATC--TGGAATGTAATAT-GTCTGTG--------TGTGGTGGAC------ACTCA-GTGTGAG------------AGGGAGAAACACACCCCT-TCCCCAAATGAAGGCAGCATATGAGCATTCAGTGGTGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46088731 180 - 120421639 CAGGGTTAG---------------------------------GG--------------TTAGAGAATA---AAGC-------------------------------TACGTCA-------------------TTAT---TTTTTGACTAACACCTGTTAATTTATGATATATCCTTAAAGGCATATATTTTGAGA----------GT------------CT----------TCACATAAGTGTATCATCATTTATTCTTGG--------TATGAGC------------------------------------TGAGATTCTCAGGC-----TCAGCTAATACTCAGCCTTAGGAGTTA---ATTTGT i mm10.chr13 C 0 C 0 s canFam3.chr34 30173895 213 - 42124431 --CTGTGTA---------------------------------GC--------------C---TGTGTG---TAGT-------------------------------TACCTTTG------------------CTGC---CCTGGGAC---TATCTTTTCATTTTTGATATTGCTCTAAAAACCTATATTTTGGGAAGTTTGGGTGGT------------TTGATGTGAATCTCAAATCTGGAGATCAGATTTA-TTGTGGAGCATCATTTGCACATGAGTGT----------TGTGAG------------AGAGACGGATATGCTT-----ACAACCTGACGTTAGGATGTGGGCCTT---TGATG- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 549056 233 + 913073 GTGTGTACA---------------------------------GG--------------TACA----CA---CGGC-------------------------------TGCCTCTG------------------CAGGGACCCTCAGACCTGTGTCTACTGGTTTGTGATGCTTTTCTAAAGGCCTCTGTTTAGAGAATTTTAACCAGT--TAGATGGAAATTTTT-----TCTCAAGCTTGTGGAA---------GT----G--------TATATGTGAGAGAGAGACAGACATTTGGGGGCAACATGGACAGGGAAAGTCACACACACACCCTAACCTGAAGTTTGCGTACGAGCCCC---AGATGT i dasNov3.JH577625 C 0 I 200 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=757060.000000 s hg38.chr3_KI270779v1_alt 42102 115 + 205312 ------------------------------------------GGTGTCTGATACCCACAGATGTTTT--TCGGCAGC-TTTCAAAGTGTGTGGGTCATTTGCCTTTCAGA---AGAACAGTTTGCAGCTCTTTCATTGCCTGACCCTGTTCT------TTAATGTGATA s panTro5.chr3 200029319 115 + 202621043 ------------------------------------------TGTGTCTGATACCCACAGATGTTTT--TCGACAGC-TTTCAAAGTGTGTGGGTTATTTGCCTTTCAGA---AAAACAATTTGCAGCTCTTTCATTGCCTGACCCTATTCT------TTAATGTAACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11820 115 + 190779 ------------------------------------------TTTGTCTGATACCCACAGATGTTTT--TCGACAGC-TTTCAAAGTGTGTGGGTTATTTGCCTTTCAGA---AAAACAGTTTGCAGCTCTTTCATTGCCTGACCCTGTTCT------TTAATGTAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866773 115 - 880730 ------------------------------------------TGTGTCTGATACCCACAGATGTTTT--TCGACAGC-TTTCAAAGTGTGTGGGTTATTTGCCTTTCAGA---AAAACAATTTGCAGCTCTTTCATTGCCTGACCCTGTTCT------TTAATGTAATG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207793 114 + 180051392 ------------------------------------------TGTGTCTGATGCCCACAGGTGTTTT--TCGGTAGC-TTTCAAAGGGTGTGGATTATCTGGCTTTCAGT---TAAACAAGTTGCAGCTCTTTCATT-TCTGACCCTGTTCT------TTAATGTAATA i rheMac8.chr6 C 0 I 4 s macFas5.chr6 180272265 110 - 181584905 ------------------------------------------TGTGTCTGATGCCCACAGGTGTTTT--TCGGTAGC-TTTCAAAGGGTGTGGGTTATCTGGCTTTCAGT---TAAACAAGTTGCAGCTCTTTCATT-TCTGACCCTGTTCT------TTAATGT---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33103 114 - 100774 ------------------------------------------TGTGTCTGATGCCCACAGGTGTTTT--TCGGTAGC-TTTCAAAGGGTGTGGGTTATCTGGCTTTCAGT---TAAACAAGTTGCAGCTCTTTCATT-TCTGACCCTGTTCT------TTAATGTAATA i macNem1.NW_012013899v1 C 0 I 4 s cerAty1.NW_012004452v1 191209 115 + 218577 ------------------------------------------CGTGTCTGATGCCCACAGGTGTTTT--TCGGCAGCTTTTCAAAGGGTGTGGGTTACTTGGCTTTTAGT---AAAACAGTTTGCAGCTCTTTCATT-CCTGACCCTGTTCT------TTAATGTAATA i cerAty1.NW_012004452v1 C 0 I 10 s chlSab2.chr4 89604665 111 - 91010382 ------------------------------------------CGTGTCTGATGCCCACAGGTGTTTT--TCGGCAGCTTTTCAAAGGGTGTGGGTTACTTGGCTTTCAGT---AAAACAGTTTGCAGCTCTTTCATT-CCTGACCCTGTTCT------TTAATGT---- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10057 115 - 74206 ------------------------------------------CGTGTCTGATGCCCACAGGTGTTTT--TCGGCAGCTTTTCAAAGGGTGTGGGTTACTTGGCTTTCAGT---AAAACAGTTTGCAGCTCTTTCATT-CCTGACCCTGTTCT------TTAATGTAATA i manLeu1.NW_012101728v1 C 0 I 10 s calJac3.chr2 151308 109 - 204313951 ------------------------------------------TGCGTCTGATACCCACAGATGTTTG--TCAGCATT-CTTCAAAGTGTGTGGGTTATTTGGCTTTCAGTTTAGAAACAATCTGCAG----GTCATTGCCTGACCCTGTTCC------T-----TAATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113212 114 - 16417988 ------------------------------------------TGTGTCTGATACCCACAGATG-TTG--TCAGCAGC-CTTCAAAGGGTGTGGGTTATTTGGCTTTCAGT---AAAACAATTTGCAGCTCTTTCATTGCCTGACCCTGTTCC------TTAATGTAATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214124 114 + 306014 ------------------------------------------TGTGTCTGATACCCACAGATG-TTG--TCAGCAGC-CTTCAAAGGGTGTGGGTTATTTGGCTTTCAGT---AAAACAATCTGCAGCTCTTTCATTGCCTGACCCTGTTCC------TTAATGTAATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75674 115 + 211231 ------------------------------------------TGTGTCTCATACCCACAGGTGTTTG--TCAGCAGC-CTTCAAAGTGTGTGGGTTGTTTGGCTTTCAGT---AAAACAATCTGCAGCTCTTTGATTGCCTGACCCTGTTCC------TTAATGTAATG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43396 100 + 2165740 ------------------------------------------TGTGTTTAGCACCCACAGG-----------------TATTAAGGTGTGTGGGCTAGTTGTCTTT-AGC---AAAGCAACTTAAGGCTTTTCTGTTGCAAGACCTTGTTCT------TTAATGTAGTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46088911 120 - 120421639 ------------------------------------------TTTAATCAATA-TTACAGGTGTTTTGGCAGGTGTT-CTTCAGGGCTTGTGTGTCACTTGTCTTTTAGT---GAAATTGCCTTAGGTTC--CAAGTGCCTGGCTTTAATCTAGGGACTTATTGTGGGT i mm10.chr13 C 0 I 3 s canFam3.chr34 30174108 79 - 42124431 -----------------------------------------------CTGAT-----------------TTGGGACC-CT-----GTGTGTGGGCTCTT----GTTTGCT---GAAGCG---TTAGGCTC-TTCAGTGCCAG-CACTGT--C------TCACTGTGGTG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 549489 148 + 913073 ggtgagagcagtgcacagagggcaggacaagagcccaTCCTGCATTTTTTATACCCATGAATGCTTT--G--------GTTTGAGGTTTGTAGGTTATTTGAACTTCAGT---AAAA-AGCTTTAGGCCTCTCCAGTACCTAATACTGTTCC------TCAA-ATGATG i dasNov3.JH577625 I 200 C 0 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=30899.000000 s hg38.chr3_KI270779v1_alt 42217 6 + 205312 ACACTT s panTro5.chr3 200029434 6 + 202621043 ACACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11935 6 + 190779 ACACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866888 6 - 880730 ACACTT i gorGor5.CYUI01015759v1 C 0 C 0 s calJac3.chr2 151417 6 - 204313951 ACACTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113326 6 - 16417988 ACACTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214238 6 + 306014 ACACTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75789 6 + 211231 ACACTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43496 6 + 2165740 ACACTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089034 6 - 120421639 ACACTT i mm10.chr13 I 3 I 42 s canFam3.chr34 30174187 6 - 42124431 ATGCTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 549637 6 + 913073 TTACTT i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 33217 4 - 100774 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e manLeu1.NW_012101728v1 10172 10 - 74206 I e chlSab2.chr4 89604776 0 - 91010382 C e cerAty1.NW_012004452v1 191324 10 + 218577 I e macFas5.chr6 180272375 0 - 181584905 C e rheMac8.chr6 207907 4 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=29144.000000 s hg38.chr3_KI270779v1_alt 42223 19 + 205312 ------GCTAAATATCTGCT--------GGTAT s panTro5.chr3 200029440 19 + 202621043 ------GCTAAATATCTGCT--------GGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11941 19 + 190779 ------GCTAAATATCTGCT--------GGTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866894 19 - 880730 ------GCTAAATATCTGCT--------GGTAT i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180272375 14 - 181584905 ----------AATATCTGCT--------GGTA- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89604776 14 - 91010382 ----------AATATCTGCT--------GGTA- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151423 18 - 204313951 ------GCTGAGTATCTGCT--------GGTA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113332 18 - 16417988 ------GCTGAGTGTCTGCT--------GGTA- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214244 18 + 306014 ------GCTGAGTGTCTGCT--------GGTA- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75795 18 + 211231 ------GCTGAGTATCTGCT--------GGTG- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43502 12 + 2165740 ------GTTAAATATCTT--------------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30174193 18 - 42124431 ------GTCAGATATTTGGT--------GTTA- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 549643 31 + 913073 ATTAACTTTGAATAGTTCTTCAGCATAAAAT-- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e macNem1.NW_012013899v1 33217 4 - 100774 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e manLeu1.NW_012101728v1 10172 10 - 74206 I e cerAty1.NW_012004452v1 191324 10 + 218577 I e rheMac8.chr6 207907 4 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=4107.000000 s hg38.chr3_KI270779v1_alt 42242 6 + 205312 CTGGTG s rheMac8.chr6 207911 6 + 180051392 CTGGTA i rheMac8.chr6 I 4 C 0 s macNem1.NW_012013899v1 33221 6 - 100774 CTGGTA i macNem1.NW_012013899v1 I 4 C 0 s otoGar3.GL873745 43514 6 + 2165740 CTGGTA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 549674 6 + 913073 GTGGTG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174211 0 - 42124431 C e aotNan1.NW_018494784v1 75813 0 + 211231 C e cebCap1.NW_016108150v1 214262 0 + 306014 C e panPan2.chrUn_NW_014024201v1 11960 0 + 190779 C e calJac3.chr2 151441 0 - 204313951 C e saiBol1.JH378155 113350 0 - 16417988 C e colAng1.NW_012116910v1 884016 6480 + 1687011 M e manLeu1.NW_012101728v1 10172 10 - 74206 I e chlSab2.chr4 89604790 0 - 91010382 C e cerAty1.NW_012004452v1 191324 10 + 218577 I e macFas5.chr6 180272389 0 - 181584905 C e nomLeu3.chr11 120785647 3854 + 123690457 I e gorGor5.CYUI01015759v1 866913 0 - 880730 C e panTro5.chr3 200029459 0 + 202621043 C a score=222043.000000 s hg38.chr3_KI270779v1_alt 42248 23 + 205312 TGGCCTTT-AGAGGTTTTACATTT s panTro5.chr3 200029459 22 + 202621043 -GGCCTTT-AGAGGTTTTACGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11960 22 + 190779 -GGCCTTT-AGAGGTTTTACATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866913 22 - 880730 -GGCCTTT-AGAGGTTTTACATTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207917 23 + 180051392 TGGCCCTT-AGAGGTTTTACATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272389 23 - 181584905 TGGCCTTT-AGAGGTTTTACATTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33227 23 - 100774 TGGCCTTT-AGAGGTTTTACATTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 191334 23 + 218577 TGGCTTTT-GGAGGTTTTACATTT i cerAty1.NW_012004452v1 I 10 C 0 s chlSab2.chr4 89604790 23 - 91010382 TGGCCTTT-AGAGGTTTTACATTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10182 23 - 74206 TGGCTTTT-GGAGGTTTTACATTT i manLeu1.NW_012101728v1 I 10 C 0 s calJac3.chr2 151441 23 - 204313951 TGGCCTTT-AGAGGTTTCACATTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113350 23 - 16417988 TGGCCTTT-AGAGGTTTCACATTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214262 23 + 306014 TGGCCTTT-AGAGGTTTCACATTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75813 23 + 211231 TGGCCTTC-AGAGGTTTCACATTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43520 22 + 2165740 TGGCCTTT-AGAGAGTT-ACATTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30174211 23 - 42124431 CAGCCTCT-AGATACTTTCTATTT i canFam3.chr34 C 0 I 15 s dasNov3.JH577625 549680 24 + 913073 TGGTCTTTAAGAAATTTTACAATT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=90694.000000 s hg38.chr3_KI270779v1_alt 42271 14 + 205312 TTATATTAAAAAAA- s panTro5.chr3 200029481 14 + 202621043 TTATATTAAAAAAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11982 14 + 190779 TTATATTAAAAAAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866935 14 - 880730 TTATATTAAAAAAA- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207940 14 + 180051392 TTATATTTAAAAAA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272412 14 - 181584905 TTATATTTAAAAAA- i macFas5.chr6 C 0 I 315 s macNem1.NW_012013899v1 33250 14 - 100774 TTATATTTAAAAAA- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 191357 14 + 218577 TTATATTTAAAAAA- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89604813 14 - 91010382 TTATATTAAAAAAA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10205 14 - 74206 TTATATTTAAAAAA- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151464 12 - 204313951 TTATATTTAAAA--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113373 12 - 16417988 TTATATTTAAAA--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214285 12 + 306014 TTATATTTAAAA--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75836 12 + 211231 TTATATTTAAAA--- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43542 14 + 2165740 TTATATTAAAAGAA- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 549704 15 + 913073 TTATATAAATAATGA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=9090.000000 s hg38.chr3_KI270779v1_alt 42285 1 + 205312 A s panTro5.chr3 200029495 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 11996 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866949 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 207954 1 + 180051392 A i rheMac8.chr6 C 0 I 337 s macFas5.chr6 180272741 1 - 181584905 a i macFas5.chr6 I 315 I 1 s macNem1.NW_012013899v1 33264 1 - 100774 A i macNem1.NW_012013899v1 C 0 I 337 s cerAty1.NW_012004452v1 191371 1 + 218577 A i cerAty1.NW_012004452v1 C 0 I 971 s chlSab2.chr4 89604827 1 - 91010382 A i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 10219 1 - 74206 A i manLeu1.NW_012101728v1 C 0 I 332 s calJac3.chr2 151476 1 - 204313951 A i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 113385 1 - 16417988 A i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 214297 1 + 306014 A i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 75848 1 + 211231 A i aotNan1.NW_018494784v1 C 0 I 1 s otoGar3.GL873745 43556 1 + 2165740 G i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 549719 1 + 913073 A i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=-7003.000000 s hg38.chr3_KI270779v1_alt 42286 2 + 205312 -AA s panTro5.chr3 200029496 2 + 202621043 -AA i panTro5.chr3 C 0 I 2 s panPan2.chrUn_NW_014024201v1 11997 1 + 190779 -A- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866950 2 - 880730 -AA i gorGor5.CYUI01015759v1 C 0 I 2 s macFas5.chr6 180272743 1 - 181584905 -a- i macFas5.chr6 I 1 C 0 s chlSab2.chr4 89604829 1 - 91010382 -A- i chlSab2.chr4 I 1 I 2144 s calJac3.chr2 151478 1 - 204313951 -A- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 113387 1 - 16417988 -A- i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 214299 1 + 306014 -A- i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 75850 1 + 211231 -A- i aotNan1.NW_018494784v1 I 1 C 0 s otoGar3.GL873745 43557 1 + 2165740 -A- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 549720 2 + 913073 GG- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e macNem1.NW_012013899v1 33265 337 - 100774 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e manLeu1.NW_012101728v1 10220 332 - 74206 I e cerAty1.NW_012004452v1 191372 971 + 218577 I e rheMac8.chr6 207955 337 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=44901.000000 s hg38.chr3_KI270779v1_alt 42288 14 + 205312 GAAGTCGGATGGTT s panTro5.chr3 200029500 14 + 202621043 GAAGTCAGATGGTT i panTro5.chr3 I 2 C 0 s panPan2.chrUn_NW_014024201v1 11998 14 + 190779 TATGTCAGATGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866954 14 - 880730 GAAGTCAGATGGTT i gorGor5.CYUI01015759v1 I 2 C 0 s macFas5.chr6 180272744 14 - 181584905 gaaGTCAAATGTTT i macFas5.chr6 C 0 C 0 s calJac3.chr2 151479 13 - 204313951 GAAGT-AAATGGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113388 14 - 16417988 GAAGTCAAATGGTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214300 14 + 306014 GACGTCAAATGGTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75851 14 + 211231 GAAGTCAAACGGTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43558 14 + 2165740 GAAGTCAGTGGCTT i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 549722 14 + 913073 GAAGACAAATGGTT i dasNov3.JH577625 C 0 I 174 e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e macNem1.NW_012013899v1 33265 337 - 100774 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e manLeu1.NW_012101728v1 10220 332 - 74206 I e chlSab2.chr4 89604830 2144 - 91010382 I e cerAty1.NW_012004452v1 191372 971 + 218577 I e rheMac8.chr6 207955 337 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2420.000000 s hg38.chr3_KI270779v1_alt 42302 6 + 205312 TCTTGT s panTro5.chr3 200029514 6 + 202621043 TTTTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12012 6 + 190779 TTTTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866968 6 - 880730 TTTTGT i gorGor5.CYUI01015759v1 C 0 C 0 s macFas5.chr6 180272758 6 - 181584905 TTCTGG i macFas5.chr6 C 0 C 0 s calJac3.chr2 151492 5 - 204313951 TTTGG- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113402 5 - 16417988 TTTGG- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214314 5 + 306014 TTTGG- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75865 5 + 211231 TTTGG- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43572 5 + 2165740 TTTAG- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e dasNov3.JH577625 549736 174 + 913073 I e canFam3.chr34 30174234 15 - 42124431 I e macNem1.NW_012013899v1 33265 337 - 100774 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e manLeu1.NW_012101728v1 10220 332 - 74206 I e chlSab2.chr4 89604830 2144 - 91010382 I e cerAty1.NW_012004452v1 191372 971 + 218577 I e rheMac8.chr6 207955 337 + 180051392 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=539699.000000 s hg38.chr3_KI270779v1_alt 42308 82 + 205312 AATAT-GGTggccctccgtatccatcggttccacatgtgtggtttcaaccaactatgtactgaaaataaaattgcatccttac s panTro5.chr3 200029520 82 + 202621043 AATAT-GGTggccctccgtatctatctgtttcacatgtgtggtttcaaccaactatgtactgagaataaaattgcatccttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12018 82 + 190779 AATAT-GGTggccctccgtatccatcggttccacatgtgtggtttcaaccaactatgtactgagaataaaattgcatccttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 866974 82 - 880730 AATAT-GGTggccctccgtatccatcggttccacatgtgtggtttcaaccaactatgtattgaaaataaaattgcatccttac i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208292 82 + 180051392 AATAT-GGTggccgtctgtacccgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac i rheMac8.chr6 I 337 C 0 s macFas5.chr6 180272764 82 - 181584905 AATAT-GGTggccgtctgtacccgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33602 82 - 100774 AATAT-GGTggccgtctgtacccgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac i macNem1.NW_012013899v1 I 337 C 0 s chlSab2.chr4 89606974 82 - 91010382 AATAT-GATggccgtctgtacccgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac i chlSab2.chr4 I 2144 C 0 s manLeu1.NW_012101728v1 10552 82 - 74206 AATAT-GGTggccgtctgtacctgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac i manLeu1.NW_012101728v1 I 332 C 0 s calJac3.chr2 151497 81 - 204313951 -ATAT-GGTggccctccatatccatgggttccacatgtgtggtttcaaccaactatgtgttggagatacagttgtatccttac i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 113407 81 - 16417988 -ATAT-GGTggccctccatatccatcggttccacatgtgtggtttcaaccaactatgtgttgaaaatacaattgtatccttac i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 214319 81 + 306014 -ATGT-GGTggccctccatatccatgggttccacatgtgtggtttcaaccaactatgtgttgaaaatacaattgtatccttac i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 75870 81 + 211231 -ATAT-GGTggccctgcatatccatgggttccacatgtgtggtttcagccaactacgtgctgaacatacagctgtatccttac i aotNan1.NW_018494784v1 C 0 I 10 s otoGar3.GL873745 43577 83 + 2165740 AGTACAGATATCTGtccatatccgtgggttccacatctatggatttaaccaaccataaaaacaaaataaaattgcatctttac i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e dasNov3.JH577625 549736 174 + 913073 I e canFam3.chr34 30174234 15 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=85578.000000 s hg38.chr3_KI270779v1_alt 42390 22 + 205312 ---aaacacgcagactttttttttt- s panTro5.chr3 200029602 20 + 202621043 ---aaatacgcagactttttttt--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12100 19 + 190779 ---aaatacgcagacttttttt---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867056 22 - 880730 ---aaatacgcagactttttttttt- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208374 19 + 180051392 ---aaatatgcagacttttttt---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272846 19 - 181584905 ---aaatatgcagacttttttt---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33684 19 - 100774 ---aaatatgcagacttttttt---- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607056 19 - 91010382 ---aaatatgcagacttttttt---- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10634 19 - 74206 ---aaatatgcagacttttttt---- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151579 18 - 204313951 ---gaacatgcagactttttt----- i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 113489 18 - 16417988 ---gaacatgcagactttttt----- i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 214401 18 + 306014 ---gaacatgcagactttttt----- i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 43660 23 + 2165740 tgatgatgtacagacttttttt---g i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e dasNov3.JH577625 549736 174 + 913073 I e canFam3.chr34 30174234 15 - 42124431 I e aotNan1.NW_018494784v1 75951 10 + 211231 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=656423.000000 s hg38.chr3_KI270779v1_alt 42412 104 + 205312 ccttgtcattgttcgctaagcaacacagtgtagcagctatttacctagcatttacattgtattaggtactatgagtaatcctggagttgctgtacaacttaaat s panTro5.chr3 200029622 104 + 202621043 ccttgtcattgttcgctaagcaacacagtgtagcagctatttacctagcatttacattgtattaggtactatgagtcatcctggagttgctgtacaacttaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12119 104 + 190779 ccttgtcattgttcgctaagcaacacagtgtagcagctgtttacctagcatttacattgtattaggtactatgagtcatcctggagttgctgtacaacttaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867078 104 - 880730 cctcgtcattgttcgctagacaacacagtgtagcagctatttacctagcatttacattgtattaggtactatgagtaatcctggagttgctgtaaaacttaaat i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208393 104 + 180051392 cctcgtcattgttccctaaacaacacagttcaacaactatttacgtagtatttacattgtattaggtactgtgagtaatcctggagttgttgtaaagcttaaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272865 104 - 181584905 ccccgtcattgttccctaaacaacacagtttaacaactatttacgtagcatttacattgtattaggtactgtgagtaatcctggagttgttgtaaagcttaaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33703 104 - 100774 cctcgtcattgttccctaaacaacacagtttaacaactatttacgtagtatttacattgtattaggtactgtgagtaatcctggagttgttgtaaagcttaaat i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607075 104 - 91010382 ccccgtcattgttccctaaacaacacagtttaacaactatttacgtagcatttacattatattaggtactgtgagtaatcctggagttgttgtaaagcttaaat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10653 104 - 74206 cctcgtcattgttccctaaacaacacagtttaacaactatttacgtagtatttacattgtattaggtactgtgagtaatcctggagttgttgtaaagcttaaat i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151597 104 - 204313951 ccttgtcattgttccttaaacaacacagcatgacaactacttatatagcatttacattgcgttaggtactatgagtaatcctggagttgtcgcaaaactgaagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113507 104 - 16417988 ccttgtcattgttccctaaacaacacagcatgacaactatttacatagcatttacattgcattaggtactgtgagcaatcctggagttgtcctaaaactgaaat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214419 104 + 306014 ccttgtcattgtcccctaaacagcacagcatgacagctatttacatagcacttacattgcgttaggtactgtgagtaatcctggagttgtcctaaaaccgaaat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 75961 104 + 211231 ccttgtcattgttcccgaaacaacacagcacgacagctatttacatggcatttgcattgcgtcaggtgctacgagtaatcctggagttgtcgtaaagctgaaat i aotNan1.NW_018494784v1 I 10 C 0 s otoGar3.GL873745 43683 79 + 2165740 ----gtcattactgcctagacaaagtaatgtaacaactatttacatgggatttacattgtattaagtgtcataagtaatctag--------------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e dasNov3.JH577625 549736 174 + 913073 I e canFam3.chr34 30174234 15 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=539471.000000 s hg38.chr3_KI270779v1_alt 42516 90 + 205312 gtaaaacttgaaatga-ggatga-----tttaaaatatgga---ggaggatgtgcataggttatatgcaaatactctgccattttatattagggac-ttg s panTro5.chr3 200029726 89 + 202621043 gtaaaacttgaaatga-ggatg------tttgaaatatgga---ggaggatgtgcgtaggttatatgcaaatactctcccattttatattagggac-ttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12223 89 + 190779 gtaaaacttgaaatga-ggatg------tttgaaatatgga---gggggatgtgcataggttatatgcaaatactctcccattttatattagggac-ttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867182 90 - 880730 gtaaaacttgaaatga-ggatga-----tttaaaatatgga---ggaggatgtgcataggttatatgcaaatactctcccattttatattagggac-ttg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208497 90 + 180051392 gtaaaactttaaatga-ggatga-----tgtaaagtataga---ggaggatgtgcataggttatatacaaatactcttccattttatattagggac-ttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180272969 90 - 181584905 gtaaaactttaaatga-ggatga-----tgtaaagtataga---ggaggatgtgcataggttatatacaaatactcttccattttatattagggac-ttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33807 90 - 100774 gtaaaactttaaatga-ggatga-----tgtaaagtataga---ggaggatgtgcataggttatatataaatactcttccattttatattagggac-ttg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607179 90 - 91010382 gtaaaacttgaaatga-ggatga-----tgtaaagtataga---ggaggatgtgcataggttacatacaaatactcttccattttatattagggac-ttg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10757 90 - 74206 gtacaactttaaatga-ggatga-----tgtaaagtataga---ggaggatgtgcataggttatatataaatactcttccattttatattagggac-ttg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151701 89 - 204313951 gtacagctttaagtgagggatga-----tttaaagtctgga---ggaggatgtgcataggttatatgcagatactctcccatttcatattagagac---a i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113611 94 - 16417988 gtacagctttaaatgagggatga-----tttaaagtctggaggcggcggatgtgcataggttatatgcagatactctccccttttgtattagagac-ttg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214523 92 + 306014 gtatagctttaaatgagggatga-----tttaaagtctgga---ggaggatgtgcataggctatatgcagatactctccccttttgtattagagactttg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76065 91 + 211231 gtgcagctttaagtgagggatga-----tttaaagtctgga---ggaggatgtgcatgggttatatgcagatactctcccattttatattagggac-ttg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43762 62 + 2165740 -----------------ggatgt-----ttca------------gtagtatatgc-tagattataggtaaatattatcttattttatac--aggac-ttg i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 549910 85 + 913073 aaaacatttgatgtgt-gagtgaCCATTTCTAGATTCTGGG---TGAGAATG----------ACATTCAAATACTGTTTTCTTCTAGAGAAAGAAT-TTG i dasNov3.JH577625 I 174 I 332 e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=551575.000000 s hg38.chr3_KI270779v1_alt 42606 82 + 205312 agcatccacggattttggtgtccgt-gggggtcctggacccaacctgccacggatacgcagggacgac--tATTTGGCATAGAGG s panTro5.chr3 200029815 82 + 202621043 agcatccacggattttggtatccgt-gggggtcctggacccaacctgccacggatacgcagggacgac--tATTTGGCATAGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12312 82 + 190779 agcatccacggattttggtatccgt-gggggtcctggacccaacctgccacggatacgcagggacgac--tATTTGGCATAGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867272 82 - 880730 agcatccacggattttggtatccgt-gggggtcctggacccaacctgccacggatacgcagggatgac--tATTTGGCATAGAGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208587 84 + 180051392 agcatccacggattttagtatccat-gggggtcctggacccaacctgccacagatacgcagggacgattgTGTTTGGCATAGAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273059 84 - 181584905 agcatccacggattttagtatccat-gggggtcctggacccaacctgccacggatacgcagggacgattgTGTTTGGCATAGAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33897 84 - 100774 agcatccacggattttagtatccat-gggggtcctggacccaacctgccacagatacgcagggacgattgTGTTTGGCATAGAGC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607269 84 - 91010382 agcatccacggattttagtatccat-gggggtcctggacccaacctgccacggatacgcagggacgactgTGTTTGGCATAGAGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10847 84 - 74206 agcatctacagattttggtatccat-gggggtcctggacccaacctgccacagatacgcagggacgattgTGTTTGGCATAGAGC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151790 82 - 204313951 aacatccacagattttggtatccat-gggggtcctggagccagtctgccatggatacacagggatgac--tATTTGGTATAGAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113705 82 - 16417988 aacatccacagattctggtatccat-gggggtcctggagccagactgccatggatacacagggacgac--tATTTGGTATAGAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214615 82 + 306014 aacatccacagattctggtatccat-gggggtcctggagccagtctgccatggatacacagggacgac--tATTTGGTATAGAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76156 82 + 211231 agcatccacagattctggtgtccgt-gggggtcctggagccagtctgccatgggtacacagggacgac--tATTCGGTATAGAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43824 83 + 2165740 agcatctatagatttttcagtccgtaggaagtcctaaaatcaattcatcatggacacagagggataac--tATTTGTCATAGAGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46089040 42 - 120421639 I e dasNov3.JH577625 549995 332 + 913073 I e canFam3.chr34 30174234 15 - 42124431 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=-11237.000000 s hg38.chr3_KI270779v1_alt 42688 2 + 205312 C----C s panTro5.chr3 200029897 2 + 202621043 C----C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12394 2 + 190779 C----C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867354 2 - 880730 C----C i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208671 6 + 180051392 CCTTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273143 6 - 181584905 CCTTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33981 6 - 100774 CCTTTC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607353 6 - 91010382 CCTTTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10931 6 - 74206 CCTTTC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151872 6 - 204313951 CCTTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113787 6 - 16417988 CCTTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214697 6 + 306014 CCTTTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76238 6 + 211231 CCTTTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43907 3 + 2165740 AC---T i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30174249 2 - 42124431 -CT--- i canFam3.chr34 I 15 C 0 e mm10.chr13 46089040 42 - 120421639 I e dasNov3.JH577625 549995 332 + 913073 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=534901.000000 s hg38.chr3_KI270779v1_alt 42690 77 + 205312 TAATGCTTTTACCAAGGACAGCCGCTGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagtaagggcagagttttt s panTro5.chr3 200029899 77 + 202621043 TAATGCTTTTACCAAGGACAGCCGCTGCAGCCTGTGA-TCCCTGAGAC--gag--tgtgagttcagtaagggcagagttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12396 77 + 190779 TAATGCTTTTACCAAGGACAGCCGCAGCAGGCTGTGA-CCCCTGAGAC--gag--tgtgagttcagtaagggcagagttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867356 77 - 880730 TAATGCTCTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagtaagggcagagttttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208677 77 + 180051392 TAATGCACTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagggagggcagagttttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273149 77 - 181584905 TAATGCACTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagggagggcagagttttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 33987 77 - 100774 TAATGCACTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagggagggcagagttttt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607359 61 - 91010382 TAATGCACTTACCAAGGACAGccgcagcaggctgtga-tccctgagat--gag--tgt----------------gagttttt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 10937 77 - 74206 TAATGCACTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAT--gaa--tgtgagttcagggagggcagagttttt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151878 75 - 204313951 TGATGCCATTACCAAGGACAAC--CAGCAGGTTGTGA-TCCCCAAGAC--Aaa--cgtgagttcagtgagggcagagttttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113793 77 - 16417988 TGATGCAATTACCGAGGACAGCCGCAGCAGGCTGTGA-GCCCCAAGAC--Aag--tgtgagttcagtgagggcagggttttt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214703 75 + 306014 TGATACAGTTACCAAGGACAGCCACAGCAGGCTGTGA-Gccccaagac--aag--tgtgagttcagtgagggca--gttttt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76244 77 + 211231 TGATGCAGTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCCGAGAC--Aag--tgtgagttcagtgagggcagagttttt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 43910 76 + 2165740 TAATGCATTTACTAAGGAAAAG-GTAGCAAAC--TGA-TCCCTAAGACTGGAG--TGTGAATTCAGTGAGGGCAGGGTTTTT i otoGar3.GL873745 C 0 I 260 s mm10.chr13 46089082 74 - 120421639 TAATATATTTACCAAGGAAAAC---AGGAAATCGTAG-TACCCGAGGC--AAGGATGTAAGATTGGTGAGTATAGGCTCT-- i mm10.chr13 I 42 C 0 s canFam3.chr34 30174251 74 - 42124431 TAATGCATTTATCAAGGAAAAC------ACATTGTAACTTTCTGATactagag--tatgagcctagcgacggctggatgtct i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 549995 332 + 913073 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=791986.000000 s hg38.chr3_KI270779v1_alt 42767 102 + 205312 gttctggttctcagctgtgtcccagcacctgggattgtccctggcatac-------agtagatgctt-----agaaaagatttgatgaGAGGGTGGCCGTACATG-AGGG-GAAAT s panTro5.chr3 200029976 102 + 202621043 gttctggttctcagctgtgtcccagcacctgggattgtccctggcacac-------agtagatgctt-----agaaaagatttgatgaGAGGGTGGCCGTACACG-AGGG-GAAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12473 102 + 190779 gttctggttctcagctgtgtcccagcacctgggattgtccctggcacac-------agtagatgctt-----agaaaagatttgatgaGAGGGTGGCCGTACACG-AGGG-GAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867433 102 - 880730 gttctggttctcagctgtgtcccagcacctaggattgtccctggcacac-------actagatgctt-----agaaaagatttgatgaGAGGGTGGTCGTACATG-AGGG-GAAAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208754 102 + 180051392 gttctgggtctcagctgtgtcccagcacctaggattgtccctggcacac-------agtagatgctt-----agaaaagatttgatgagagggtgaGCATAAATG-AGGG-GAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273226 102 - 181584905 gttctgggtctcagctgtgtcccagcacctaggattgtccctggcacac-------agtagatgctt-----agaaaagatttgatgagagggtgaGCATAAATG-AGGG-GAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34064 101 - 100774 gttctgggtctcagctgtgtcccagcacctaggattgtccctggcacac-------agtagatgctt-----ag-aaagatttgatgagagggtgaGCATAAATG-AGGG-GAAAT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89607420 102 - 91010382 gttctgggtctcagctgtgtcccagcacctaggatggtccctggcacac-------agtagatgctt-----aggaaagatttgatgaGAGGGCGACCATAAATG-AGGG-GAAAT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11014 102 - 74206 gttctgggtctcagctgtgtcccagcacctaggattgtcctttgcacac-------agtagatgctt-----agaaaagatttgatgagagggtgaGCATAAATG-AGGG-GAAAT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 151953 102 - 204313951 gttctggttctcagctgtgtcccagcacctaggattgtccctggcacag-------agtagacattt-----agaaaagattcgatgaGAGGGTGGGCATACATG-AGGG-GAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113870 102 - 16417988 gttctggttctcagctgtgtcccagcacctaggattgtccctggcacag-------aggagacattt-----agaaaagatttgatgaGAGGGTGGCCATACATG-AGGG-GAAAT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214778 102 + 306014 gttctggttctcagctgtgtccaagcacctaggattgtccctggcacag-------agtagacattt-----agaaaagatttgatgaGAGGGTGGCCATACATG-AGGG-GAAAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76321 102 + 211231 gttctggttctcagctgtgtcccagcacctaggattgcccctggcacag-------agcagacattt-----agaaaagatttgACGAGAGGGTGGCCGTACACG-AGCG-GAAAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44246 103 + 2165740 gttcctgttcttggccatgacccagcacctagtatcatccctgttgtgc-------agtagatgctc-----agaaaagatttgatgtaagagtgaCCATAAGTGAAGGG-GAGAT i otoGar3.GL873745 I 260 C 0 s mm10.chr13 46089156 105 - 120421639 ------GTTCTTGGCTGTGTCC---TTCACAGAAGTGTTC-TGACACACTATGATTAACAAGTACCTGAAGGAAAAAAGTATCAATGGGACACTGACCATAGATG-AAGGTGACAT i mm10.chr13 C 0 C 0 s canFam3.chr34 30174325 99 - 42124431 gtcccagtcct-aggtgtgtcccagcacata--ctccaccctggcacat-------ggtaggtgctc-----agaaatgaggtgagaaatggatgGCCACAAGTG-AGGA-GAGAT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 549995 332 + 913073 I e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=368064.000000 s hg38.chr3_KI270779v1_alt 42869 55 + 205312 TTTCCTCAGTATC-AAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCT s panTro5.chr3 200030078 55 + 202621043 TTTCCTCAGTATC-AAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12575 55 + 190779 TTTCCTCAGTATC-AAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867535 55 - 880730 TTTCCTCAATATC-AAAACATGTTGAAACTCACACGCTTCAAAGATGACTTATTCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208856 55 + 180051392 TTTCCTCAGTATC-AAAACATATTGAAACTCACATGCTTCCAAGATGACGTATTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273328 53 - 181584905 TTTCCTCAGTATC-AAAAC--ATTGAAACTCACATGCTTCCAAGATGGCGTATTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34165 55 - 100774 TTTCCTCAGTATC-AAAACATATTGAAACTCACATGCTTCCAAGATGACGTATTCT i macNem1.NW_012013899v1 C 0 M 545 s chlSab2.chr4 89607522 55 - 91010382 TTTCCTCAGTATC-AAAACATGTTGAAACTCACATGCTTCCAAGATGACGTATTCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11116 55 - 74206 TTTCCTCAGTATC-AAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 152055 53 - 204313951 TTTCCTTAGTATC-AGAAAATGTGGAAGCTCAC--GCTTCCATGATGACGTAGTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 113972 43 - 16417988 TTTCCTCAGTATCAAAAAAATGTGGAAACTCAC--GCTTCC-----------GTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214880 53 + 306014 TTTCCTCAGTATC-AAAAAATGTGGAAACTCAC--GCTTCCGTGATGACGTAGTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76423 53 + 211231 TTTCCTCAGTATC-AAAAAATGTGGAAACTCGC--GCTTCCGTGATGACGTAGTCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44349 54 + 2165740 TTTTTTTAGTGTC-AAAA-ATGTTGAAACTTACATGTTTCGATGATTTTGTATTCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089261 42 - 120421639 TTTCCTCAAGATC-AAAGATTGTTCAGTCTAACATA-------------GTGATCT i mm10.chr13 C 0 C 0 s canFam3.chr34 30174424 54 - 42124431 TCTGTACAGCATA-AGAACA-GTGGAACTTTATATGCTTCAGTGACTTCGTAATCT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550327 54 + 913073 TTTTACCAGTATC-AAAGAATCTTGGCCCTTATGTGCTTT-ATGATTTTGTAATCT i dasNov3.JH577625 I 332 C 0 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=83310.000000 s hg38.chr3_KI270779v1_alt 42924 16 + 205312 CAGGTCTGCTGCCGTT s panTro5.chr3 200030133 16 + 202621043 CAGGTCTGCTGCCATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12630 16 + 190779 CAGGTCTGCTGCCATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867590 16 - 880730 CAGGTCTGCTGCCGTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208911 16 + 180051392 CAGGTCTCCTGCCGTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273381 16 - 181584905 GAGGTCTCCTGCCGTT i macFas5.chr6 C 0 I 319 s chlSab2.chr4 89607577 16 - 91010382 GACGTCTCCTGCCGTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11171 16 - 74206 CAGGTCTCCTGCCGTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 152108 16 - 204313951 CAGGTTTCCTGCCATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114015 16 - 16417988 CAGGCTTCCTGCCATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214933 16 + 306014 CAGGTTTCCTGCCATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76476 16 + 211231 CAGGTTTCCTGCCGTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44403 16 + 2165740 CAGAATTTCTACGCTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089303 12 - 120421639 TAGCTCTTTCTT---- i mm10.chr13 C 0 C 0 s canFam3.chr34 30174478 16 - 42124431 CATATTTTCTGTAATT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550381 16 + 913073 CAATTTTTTTATAATT i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 34220 545 - 100774 M e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=156334.000000 s hg38.chr3_KI270779v1_alt 42940 22 + 205312 -------------GCCATTCTCTGCCTTATGTGAT s panTro5.chr3 200030149 22 + 202621043 -------------GCCGTTCTCTGCCTTATGTGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12646 22 + 190779 -------------GCCGTTCTTTGCCTTATGTGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867606 22 - 880730 -------------GCCGTTCTCTGCCTTATGTGAT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208927 22 + 180051392 -------------GCCATTCTCTGCCTTATGTGAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273716 22 - 181584905 -------------GCCGTTCTCTGCCTTATGTGAT i macFas5.chr6 I 319 C 0 s chlSab2.chr4 89607593 22 - 91010382 -------------GCAGTTCTCTGCCTTGTGTGAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11187 22 - 74206 -------------GCCGTTCTCTGCCTTATGTGAT i manLeu1.NW_012101728v1 C 0 I 300 s calJac3.chr2 152124 22 - 204313951 -------------ACTGTTCTCTGGCTTATGTGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114031 22 - 16417988 -------------ACTGTTCTCTGCCTTATGTGGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214949 22 + 306014 -------------ACTGTTCTCTGCCTTATGTGGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76492 22 + 211231 -------------ACTGTTCTCTGCCTTACGTGGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44419 22 + 2165740 -------------ACCATTCTGTGCCTTACGTTAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089315 19 - 120421639 -------------ACCATTCTTTGCCTCATGT--- i mm10.chr13 C 0 C 0 s canFam3.chr34 30174494 22 - 42124431 -------------ACCATTCTTTGCCTCACACCAT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550397 35 + 913073 AAATGTGACTTGTAATATTTTTTGCCTTATTTTGT i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 34220 545 - 100774 M e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=44267.000000 s hg38.chr3_KI270779v1_alt 42962 6 + 205312 GGTGTT s panTro5.chr3 200030171 6 + 202621043 GGTGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12668 6 + 190779 GGTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867628 6 - 880730 GGTGTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 208949 6 + 180051392 GGTGTT i rheMac8.chr6 C 0 I 415 s macFas5.chr6 180273738 6 - 181584905 GGTGTT i macFas5.chr6 C 0 I 4 s chlSab2.chr4 89607615 6 - 91010382 GGTGTT i chlSab2.chr4 C 0 I 232 s manLeu1.NW_012101728v1 11509 6 - 74206 GGTGTT i manLeu1.NW_012101728v1 I 300 I 4 s calJac3.chr2 152146 6 - 204313951 GGTGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114053 6 - 16417988 GGTGTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214971 6 + 306014 GGTGTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76514 6 + 211231 GGTGTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44441 6 + 2165740 AATGTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30174516 6 - 42124431 GATGTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550432 6 + 913073 CATCTT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46089334 0 - 120421639 C e macNem1.NW_012013899v1 34220 545 - 100774 M e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=188519.000000 s hg38.chr3_KI270779v1_alt 42968 21 + 205312 --CTGTCTTACCAGAGGCTGTGG s panTro5.chr3 200030177 21 + 202621043 --CTGTCTTACCAGAGGCTGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12674 21 + 190779 --CTGTCTTACCAGAGGCTGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867634 21 - 880730 --CTGTCTTACCAGAGGCTGTGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209370 21 + 180051392 --CTGTCTTCCCAGAGGCTGTGG i rheMac8.chr6 I 415 C 0 s macFas5.chr6 180273748 21 - 181584905 --CTGTCTTCCCAGAGGCTGTGG i macFas5.chr6 I 4 C 0 s chlSab2.chr4 89607853 21 - 91010382 --CTGTCTTCCCAGAGGCTGTGG i chlSab2.chr4 I 232 C 0 s manLeu1.NW_012101728v1 11519 21 - 74206 --CTGTCTTCCCAGAGGCTGTGG i manLeu1.NW_012101728v1 I 4 C 0 s calJac3.chr2 152152 21 - 204313951 --CTGTCTTGCCAGAGGCTGTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114059 21 - 16417988 --CTGTCTTACCAGAGGCTGTGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214977 21 + 306014 --CTGTCTTACCAGAGGCTGTGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76520 21 + 211231 --CTGTCTCACCAGAGGCTGTGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44447 21 + 2165740 --CCATTTTCCCAGAGGCTGTGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089334 20 - 120421639 ---TGTATTTGCAGAGGCTGTGG i mm10.chr13 C 0 C 0 s canFam3.chr34 30174522 21 - 42124431 --CTTTTCCACCAGAGGCTGTGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550438 23 + 913073 TTTTCTGCTACCAGAGGCTGTGG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 34220 545 - 100774 M e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 191372 971 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=444069.000000 s hg38.chr3_KI270779v1_alt 42989 37 + 205312 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC s panTro5.chr3 200030198 37 + 202621043 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12695 37 + 190779 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867655 37 - 880730 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209391 37 + 180051392 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273769 37 - 181584905 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 192343 39 + 218577 CCCTGAGAAAGAGTTCACGTCTACCTGCAGCTGCACCAC i cerAty1.NW_012004452v1 I 971 I 1269 s chlSab2.chr4 89607874 37 - 91010382 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11540 37 - 74206 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 152173 37 - 204313951 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114080 37 - 16417988 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 214998 37 + 306014 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76541 37 + 211231 CCCTGAGAAAGA--TCACGTCTACCTGCAGCTGCACCAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44468 37 + 2165740 CCCTGAGAAGGA--TCACGTCTACCTACAGTTGCACCAC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089354 37 - 120421639 CCCTGAGAAAGA--TCACGTCTACCTGCAGTTGCATCAT i mm10.chr13 C 0 C 0 s canFam3.chr34 30174543 37 - 42124431 CCCCGAAAAAGA--CCATGTGTACCTGCAGTTGCACCAC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550461 37 + 913073 CCCTGAAAAGGA--TCATGTCTACCTGCAGTTGCACCAC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 34220 545 - 100774 M e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=247700.000000 s hg38.chr3_KI270779v1_alt 43026 28 + 205312 CTACCTCCAGAGCAGCTGGCCATGCCCT s panTro5.chr3 200030235 28 + 202621043 CTACCTCCAGAGCAGCTGGCCATGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12732 28 + 190779 CTACCTCCAGAGCAGCTGGCCATGCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867692 28 - 880730 CTACCTCCAGAGCAGCTGGCCATGCCCT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209428 28 + 180051392 CTGCCTCCGGAGCAGCTGGCCACGCGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273806 28 - 181584905 CTGCCTCCGGAGCAGCTGGCCACGCGCC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89607911 28 - 91010382 CTGCCTCCGGAGCAGCTGGCCATGCGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11577 28 - 74206 CTGCCTCCGGAGCAGCTGGCCACGCGCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 152210 28 - 204313951 CTGCCTCCAGAGCAGCTGGCCACGCGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114117 28 - 16417988 CTGCCTCCAGAGCAGCTGGCCACGCGCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215035 28 + 306014 CTGCCTCCAGAGCAGCTGGCCATGCGCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76578 28 + 211231 CTGCCTCCAGAGCAGCTGGCCACGCGCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44505 28 + 2165740 CTACCCCCTGCGCAGCTAGCCACACGCC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089391 28 - 120421639 CTGCCTCCTGAGCAACTGGCCACACGTC i mm10.chr13 C 0 C 0 s canFam3.chr34 30174580 28 - 42124431 CTACCGCCCGAGCAGTTGGCCATACGTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550498 28 + 913073 CTGCCCCCGCAGCAGATCGCCATGCGCC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 34220 545 - 100774 M e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 192382 1269 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=34022.000000 s hg38.chr3_KI270779v1_alt 43054 3 + 205312 TGC s panTro5.chr3 200030263 3 + 202621043 TGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12760 3 + 190779 TGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867720 3 - 880730 TGC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209456 3 + 180051392 TGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273834 3 - 181584905 TGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34769 3 - 100774 TGC i macNem1.NW_012013899v1 M 545 C 0 s chlSab2.chr4 89607939 3 - 91010382 TGC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11605 3 - 74206 TGC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 152238 3 - 204313951 TCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114145 3 - 16417988 TGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215063 3 + 306014 TGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76606 3 + 211231 TGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44533 3 + 2165740 TGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089419 3 - 120421639 TAC i mm10.chr13 C 0 C 0 s canFam3.chr34 30174608 3 - 42124431 TGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550526 3 + 913073 TGC i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e cerAty1.NW_012004452v1 192382 1269 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=722878.000000 s hg38.chr3_KI270779v1_alt 43057 56 + 205312 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCG s panTro5.chr3 200030266 56 + 202621043 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTCGACGTCACGAAGGAGCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12763 56 + 190779 CCGGCATTTCAGAGACAGCCATGATCTTTGCTGGTGTCGACGTCACGAAGGAGCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867723 56 - 880730 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209459 56 + 180051392 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273837 56 - 181584905 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34772 56 - 100774 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 193651 56 + 218577 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCG i cerAty1.NW_012004452v1 I 1269 C 0 s chlSab2.chr4 89607942 56 - 91010382 CCGGCATTTCAGAGACAGCCATGATCTTCGCTGATGTGGACGTCACGAAGGAGCCG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11608 56 - 74206 CCGGCATTTCAGAGACAGCCATGATCTTCGCCGGTGTGGACGTCACGAAGGAGCCG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 152241 56 - 204313951 CTGGCATTTCGGAGACAGCCATGATCTTTGCTGGCGTGGACGTCACGAAGGAGCCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114148 56 - 16417988 CTGGCATTTCAGAGACAGCCATGATCTTTGCCGGCGTGGACGTCACGAAGGAGCCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215066 56 + 306014 CTGGCATTTCAGAGACAGCCATGATCTTTGCTGGCGTGGACGTCACGAAGGAGCCG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76609 56 + 211231 CTGGCATTTCAGAGACAGCCATGATCTTTGCTGGCGTGGACGTCACGAAGGAGCCG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44536 56 + 2165740 CTGGGATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGATGTCACCAAGGAGCCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089422 56 - 120421639 CCGGAATTTCAGAGACGGCCATGATCTTCGCTGGTGTGGATGTCACTAAGGAGCCC i mm10.chr13 C 0 C 0 s canFam3.chr34 30174611 56 - 42124431 CTGGCATTTCAGAGACGGCCATGATCTTTGCCGGTGTGGATGTCACCAAGGAGCCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550529 56 + 913073 CCGGGATCTCTGAGACGGCCATGGTCTTCACGGGCGTGGACGTCACCAAGGAGCCC i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 884016 6480 + 1687011 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1017918.000000 s hg38.chr3_KI270779v1_alt 43113 69 + 205312 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTGATG s panTro5.chr3 200030322 69 + 202621043 ATCCCTGTCCTCCCCACTGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12819 69 + 190779 ATCCCTGTCCTCCCCACTGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867779 69 - 880730 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTGATG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209515 69 + 180051392 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273893 69 - 181584905 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34828 69 - 100774 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 193707 69 + 218577 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89607998 69 - 91010382 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11664 69 - 74206 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890496 69 + 1687011 ATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i colAng1.NW_012116910v1 M 6480 C 0 s calJac3.chr2 152297 69 - 204313951 ATCCCTGTGCTCCCCACTGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGACAGGTGATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114204 69 - 16417988 ATCCCTGTCCTCCCCACCGTGCACTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215122 69 + 306014 ATCCCTGTCCTCCCCACTGTGCACTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76665 69 + 211231 ATCCCTGTCCTCCCCACCGTGCACTATAACATGGGTGGCATTCCCACCAACTACAAGGGGCAGGTGATG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44592 69 + 2165740 ATCCCTGTGCTGCCCACTGTGCACTACAACATGGGTGGCATTCCCACCAACTACAAGGGCCAGGTGACA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089478 69 - 120421639 ATCCCAGTCCTCCCCACTGTGCATTACAACATGGGTGGGATTCCCACTAACTACAAGGGACAGGTGATG i mm10.chr13 C 0 C 0 s canFam3.chr34 30174667 69 - 42124431 ATCCCCGTCCTTCCCACTGTGCATTATAACATGGGTGGCATTCCCACCAACTACAAGGGGCAGGTGACC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550585 69 + 913073 ATCCCTGTGCTCCCCACTGTGCACTACAACATGGGCGGCATCCCCACAAACTACCGGGGGCAGGTGATG i dasNov3.JH577625 C 0 I 123 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1292085.000000 s hg38.chr3_KI270779v1_alt 43182 168 + 205312 GTGCTGGCTTCTCTCCCACAGCTGGAAAGAAGGCTGGGACAATGGGGCCCATCTCGCAGTTGTCTCTTTAGATCTTAG-AGGAAGAGAC--AGATGTTTCCTTCCAGAAAGTACTGTATTGTTTGCTAAATTGCACTTGAAATTTCTATCACTG-GAGGATGGA--------AGGAGG---------------------------------------------------CT s panTro5.chr3 200030391 168 + 202621043 GTGCTGGCTTCTCTCCCACAGCTGGAAAGAAGGCTGGGACAATGGGGCCCATCTCACAGTTGTCTCTTTAGATCTTAG-AGGAAGAGAC--AGATGTTTCCTTCAAGAAAGTACTGTATTGTTTTCTAAATTGCACTTGAAATTTCTATCACTG-GAGGATGGA--------AGGAGG---------------------------------------------------CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 12888 168 + 190779 GTGCTGGCTTCTCTCCCATAGCTGGAAAGAAGGCTGGGACAATGGGGCCCATCTCACAGTTGTCTCTTTAGATCTTAG-AGGAAGAGAC--AGATGTTTCCTTCAAGAAAGTACTGTATTGTTTTCTAAATTGCACTTGAAATTTCTATCACTG-GAGGATGGA--------AGGAGG---------------------------------------------------CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 867848 168 - 880730 GTGCTGGCTTCTCTCCCACAGCTGGAAAGAAGGCTGGGACAATGGGGCCCATCTCGCAGTTGTCTCTTTAGATCTCAG-AGGAAGAGAC--AGATGTTTCCTTCAAGAAAGTACTGTATTGTTTTCTAAATTGCACTTGAAATTTCTATCACTG-GAGGATGGA--------AGGAGG---------------------------------------------------CT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209584 167 + 180051392 GTGCTGACTGCCCTCCCACAGCTGGAAAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCGTAG-AGGAAAAGAC--AGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AGGGGG---------------------------------------------------CT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180273962 167 - 181584905 GTGCTGGCTGCCCTCCCGCAGCTGGATAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCGTAG-AGGAAAAGAC--AGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AGGGGG---------------------------------------------------CT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 34897 167 - 100774 GTGCTGGCTGCCCTCCCGCAGCTGGAGAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCGTAG-AGGAAAAGAC--AGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AGAGGG---------------------------------------------------CT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 193776 167 + 218577 GTGCTGGCTGCCCTCCCACAGCTGGATAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGAAAAAGAC--AGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AGGGGG---------------------------------------------------CT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608067 167 - 91010382 GTGCTGGCTCCCCTCCCGCAGCTGGATAGAAGGCTGGGACAACGGGACCCACCTTGCAGTTTTCTCTTTAGATCTTAG-AGGAAAAGAC--AGATGTTTTCTTCAAGAAAGTACTGTCTTGTTTTCTAGATTGTATTTTAAATTTCTATTACTG-GAGGATGG---------AGGGGG---------------------------------------------------CT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11733 167 - 74206 GTGCTGGCTCCCCTCCCACAGCTGGATAGAAGGCTGGGACAATGGGGCCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGAC--AGATGTTTTCTTCAAGAAAGTACTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AGGGGG---------------------------------------------------CT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890565 167 + 1687011 GTGCTGGCTCCCCTCCCACAGCTGGAAAGAAGGCTGGGACAACGGGGCCCACCTCGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGAC--AGATGTTTTCTTCAAGAAAGTACTGTCTTGTTTTCTAGATTGCACTTTAAATTTCTATTACTG-GAGGATGG---------AGGGGG---------------------------------------------------CT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152366 162 - 204313951 GTGCCAGGTCCTCTCCCACAGCTGGAAAGAAGGCCGGGACCGTGGGGCCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGACAGAGA--TTTTCTTCCAGAAAGTACTGTGTTGTTTCATAGATTGCACTTTAAATTT-----ACCA-GAGGATGG---------ACGGAG---------------------------------------------------GT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114273 159 - 16417988 GTGCCAGGTCCTCTCCCACAGCTGGAAAGAAGCCCGGGACCGCGGGGCCCACCTTGCAGTTGTCTCTTTAGATC-TAG-AGGAAAAGAC--AGA--TTTTCTTCAAGAAAGTACTGTGTTGTTTTATAGATTGCACTTTAAATTT-----ATCA-GAGGATGG---------ACGGAG---------------------------------------------------GT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215191 160 + 306014 GTGCCAGGTCCTCTCCCAAAACTGGAAAGAAGGCCGGGACCGTGGGGCCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGAC--AGA--TTTTCTTCAAGAAAGTACTGTGTTGTTTTATAGATTGCACTTTAAATTT-----ACCA-CAGGGTGG---------ACGGAG---------------------------------------------------GT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76734 160 + 211231 GTGCCAGGTCCTCTCCCACAGCTGGAAAGAAGGCCGGGACGGCGGGACCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGAC--AGA--TTTTCTTCAAGAAAGTACTGTGTTGTTTTATAGATTGCACTTTAAATTC-----ACCA-GAGGATGG---------AGGGAG---------------------------------------------------GT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44661 148 + 2165740 GTACCA---------------------------------------GGCCCACATTGTAGTTTTCACTAAAGATTTTAG-AGAAAAAGAT--A----TTTTCTTTTAAAAAGTACTGTGGTGTGTGACAGATTA-ACTTTAAATTATTCTTACTG-GAGGGTTG---------AGGGAGGCT-GGTTGTAGTTCAGTTT-------------------------TTACTCCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089547 126 - 120421639 GTG------------------------ACAAGGCT---------------ACTTGACAAAAATCCCTTTAGTGCTTAG-AGAATGCAGT--GCA--TTT-------GATAGTGTAATGGTAGTTATCAAAT---GCTATACCTGCCAGGCAGTGAGAGGCTAGGTTATGTTTTGGGGT---------------------------------------------------TT i mm10.chr13 C 0 C 0 s canFam3.chr34 30174736 211 - 42124431 AAGCCCAG-ACCCTTCCATGGTGGGGAATAGGGCAGGAATGATG-AGCCCATCTCACAGTTGTCCCTTGCGAGCTCAGTTAGTGAAGAC--AGATGGTTTCCTC-AGAAAGCACTGTGTTGTGTTGGCAACT--CCCTTGAGTTGCT---GCTG-GAGGGCAA---------AGCGGGGCTCGGGTATATTCCAGGGTTCACATTCACTCTAATAGCGAGCAGTCACTGGT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 550654 123 + 913073 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=857352.000000 s hg38.chr3_KI270779v1_alt 43350 106 + 205312 TAATAAT--------------TT----ATTCCTCCTTAGTAAACTGTCA-------TAGATACA---TCATTTGCAGC--TTTTCCCATTTTATAA-TTACTTTCCTATATGATCTTGTGTTATTT---CTAATGAGCTT s panTro5.chr3 200030559 106 + 202621043 TAATAAT--------------TT----ATTCCTCCTTAGTAAACTGTCA-------TAGATACA---TCATTTGCAGC--TTTTCCCATTTTATAA-TTACTTTCCTATATGATCTTGTGTTATTT---CTAATGATCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13056 106 + 190779 TAATAAT--------------TT----ATTCCTCCTTAGTAAACTGTCA-------TAGATACA---TCATTTGCAGC--TTTTCCCATTTTATAA-TTACTTTCCTATATGATCTTGTGTTATTT---CTAATGATCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868016 106 - 880730 TAATAAT--------------GT----ATTCCTCCTTAGTAAACTGTAA-------TAGATACA---TCATTTGCAGC--TTTTCCCATTTTATAA-TTACTTCCCTATATGATCTTGTGTTATTT---CTAATGATCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209751 92 + 180051392 TAATAAT--------------TT----ATTCCTCCTTAGTAAATTGTCA-------TAGATGCA---TCATTTGCAGCCTTTTTTCCATTTTATAG-TTACTTTCCTATATGATCTCGTGT------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274129 92 - 181584905 TAATAAT--------------TT----ATTCCTCCTTAGTAAATTGTCA-------TAGATGCA---TCATTTGCAGCCTTTTTTCCATTTTATAG-TTACTTTCCTATATGATCTCGTGT------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35064 90 - 100774 TAATAAT--------------TT----ATTCCTCCTTAGTAAATTGTCA-------TAGATGCA---TCATTTGCAGC--TTTTTCCATTTTATAA-TTACTTTCCTATATGATCTTGTGT------------------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 193943 90 + 218577 TAATAAT--------------TT----ATTCCTCCTTAGTAAATTGTCA-------TAGATACA---TCATTTGCAGC--TTTTTCTATTTTATAG-TTACTTTCCTATATGATCTCGTGT------------------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608234 90 - 91010382 TAATAAT--------------TT----ATTCCTCCATAGTAAATTGTCA-------CAGATACG---TCATTTGCAGC--TTTTTCCATTTTATAA-TTACTTTCCTATATGATCTCGTGT------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11900 90 - 74206 TAATAAT--------------TT----ATTCCTCCTTAGTAAATTGTCA-------TAGATACA---TCATTTGCAGC--TTTTTCCATTTTATAG-TTACTTTCCTATATGATCTCGTGT------------------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890732 90 + 1687011 TAATAAT--------------TT----ATTCCTCCTTAGTAAATTGTCA-------TAGATACA---TCATTTGCAGC--TTTTTCCATTTTATAA-TTACTTTCCTCTATGATCTCGTGT------------------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152528 90 - 204313951 TAATAAT--------------TT----ATTCCTCCTTAGTAGGTTGTCA-------TGGATACA---TCATTTGCAGC--TTTCTCCATTTTATAA-GTACGTTCCTGAATGATGATGTGT------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114432 90 - 16417988 TAATAAT--------------TT----ATTCCTCCTTAGGAGGTTGTCA-------TGGATACA---TCATTTGCAGC--TTTCTCCATTTTACAA-TTATTTTCCTGTATGATGTTGTGT------------------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215351 90 + 306014 TAATAAT--------------TT----ATTCCTCCTTAGGAGGTTGTCA-------TGGATACA---TCATTTGCAGC--TTTCTCCATTTTATAA-TTACTTTCCTGTATGATGTTGTGT------------------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76894 90 + 211231 TAATAAC--------------TT----ATTCCTCCTTAGTAGGTTGTCA-------TGGATACA---TCATTTGCAGC--TTTCTCCATTTTATGA-TTACTTTCCTGTATGACGTTGTGT------------------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44809 118 + 2165740 TAATAGTTCATTATAAATTTCTT----ATTTCTTCTTAGTAAACAGTCA-------TA---ATA---TCATTCGCAGT--TTTCTCCATTTTGTGG-TTACTTTCCTATATGATCTTGTGTTACCT--GGTAATGGTCTT i otoGar3.GL873745 C 0 I 8 s mm10.chr13 46089673 99 - 120421639 CATTTAC--------------TT----GGTAATAACCAATAGAATGTTAATTCCCTTATACCTA---TAATACTAAGCACTGTTACCATTTTACAT-TTGATTTTCTATATTATTTACAGT------------------- i mm10.chr13 C 0 I 6 s canFam3.chr34 30174947 105 - 42124431 CACTTAC--------------TG----ATCCCTCCATGGTACATAGTCG-------TGGATGCAATGTCATTTGCAGC--TTTTCCCTGTTTAGGATTTATTTTCCTTTATGATCTCTTGTTACTTTTACTG-------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 550777 83 + 913073 TAATAGT--------------TTATTAATTCTTCCTTAGTAAATAGTCA-------CAGATACA---TCTTTTGCAGT--TTTT--CATGTTTTAA-TTCTTTTCCTATCTT---------------------------- i dasNov3.JH577625 I 123 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=853985.000000 s hg38.chr3_KI270779v1_alt 43456 122 + 205312 ATACATCAAGGGATCTTTATAATTCCTATTTCTAATGATCTTGTACATCGAAGGATCTTTATAATTCATACC-TGTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGCCTCCTT---------- s panTro5.chr3 200030665 122 + 202621043 ATACATCAAGGGATCTTTATAATTCCTATTTCTAATGATCTTGTACATCGAGGGATCTTTATAATTCATACC-TTTGAGTGGTTTGTGGTTCACACAGAGCTTGTCAGTCACTTAGCCTCCTT---------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13162 122 + 190779 ATACATCAAGGGATCTTTATAATTCCTATTTCTAATGATCTTGTACATCGAGGGATCTTTATAATTCATACC-TTTGAGTGGTTTGTGGTTCACACAGAGCTTGTCAGTCACCTAGCCTCCTT---------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868122 121 - 880730 ATACATCAAGGGATCTTTATAATTCCTATTTCTAATGATCTTGTACATCGA-GGATCTTTATAATTCATACC-TTTGAGTGGTTTGTGGTTCACACAGAGCTTGTCAGTCACTTAGCCTCCTT---------- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209843 96 + 180051392 --------------------------TATTTCTAATGATCTTGTACATCGAGGGATCTTTCTAATTCCTACC-TTTGAGTGGTTTGCGGTGCACACAGAGCTTGTCAGTCACTTAGGCTCCTT---------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274221 96 - 181584905 --------------------------TATTTCTAATGATCTTGTACATCGAGGGATCTTTCTAATTCCTACC-TTTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTCCTT---------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35154 96 - 100774 --------------------------TATTTCTAATGATCTTGTACATCGAGGGATCTTTCTAATTCCTACC-TTTGAGTGGTTTGTGGTTCACACAGAGCTTGTCAGTCACTTAGGCTACTT---------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194033 96 + 218577 --------------------------TATTTCTAATGATCTTGTACATCAAGGGATCTTTCTAATTCCTACC-TTTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTCCTT---------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608324 96 - 91010382 --------------------------TATTTCTAATGATCTTGTACATCGAGGGATCTTTCTAATTCCTACC-TTTGAGTTGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTACTT---------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 11990 96 - 74206 --------------------------TATTTCTAATGATCTTGTACATCAAGGGATCTTTCTAATTCCTACC-TTTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTACTT---------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890822 96 + 1687011 --------------------------TATTTCTAATGATCTTGTACATTGAGGGATCTTTCTAATTCCTACC-TTTGAGTGGTTTGTGGTTCACACAGAGCTGGTCGGTCACTTAGGCTCCTT---------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152618 96 - 204313951 --------------------------TATTTATAATGATTTTCTACATCGAGGGATCTTTATAATTCGTACC-TTTGAGTGGTCTGCAGTTCACATAGAGCTTGTTGGTCGCTTAGGCTCCTT---------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114522 96 - 16417988 --------------------------AATTTATAATGATCTTGTACATCGAGGGATCTTTATAATTCATACC-TTTGAGTGGTCTGCAGTTCACATAGAGCTTGTTGGTCACTTAGGCTCCTT---------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215441 96 + 306014 --------------------------TATTTATAATGATCTTGTACATCGAGAGATCTTTATAATTCATACC-TTTGAGTGGTCTGCAGTTCACATAGAGCTTGTTGGTCACTTAGGCTCCTT---------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 76984 96 + 211231 --------------------------TATTTATAATGATCTTGTACATCGAGGGATCTTTATAATTCATACT-TTTGAGTGGTTTGCAGTTCACACAGAGCTTGTTAGTCGCTTAGGCTCCTT---------- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46089778 66 - 120421639 ----------------------------------ATAAATTAGTGA-------------TATAATTGGTAC---TTGAGTTATAAGCAGTTTACA-AGTGCTTATCAGCT------GGTCCTT---------- i mm10.chr13 I 6 I 3 s canFam3.chr34 30175052 86 - 42124431 -----------------------------------TGACCTTTTAAATTGTGTGCTCTTTATAACCAATACT-TTGGAGTGGTTTGTAGTCCACCCAGAGCCTTTTGGTT-CTTGACTTTTTT---------- i canFam3.chr34 C 0 I 8 s dasNov3.JH577625 550860 105 + 913073 -------------------------ATTCTTACAATGACCTTGTAAATTGGGTGATTGTTACAGTTAATACCTTTTGCATGG---GAAGTTCACAAAGAACTTTCCAGTCAGTTACTTTATTTTAGTTTCATT i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 44927 8 + 2165740 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=421563.000000 s hg38.chr3_KI270779v1_alt 43578 46 + 205312 ---GTTGGGCGAGGTGGGTGGAAGCTGTTACTTTCCCCGCATA-G----ATGAA s panTro5.chr3 200030787 46 + 202621043 ---GTTGGGCGAGGTGGGTGGAAGCTGTTACTTTCCCTGCGTA-G----ATGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13284 46 + 190779 ---GTTGGGCGAGGTGGGTGGAAGCTGTTACTTTCCCTGCGTA-G----ATGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868243 46 - 880730 ---GTTGGGTGAGGTGGGTGGAAGCTGTTACTTTCCCTGCGTA-G----ATGAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209939 46 + 180051392 ---GTTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCATA-G----ATGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274317 46 - 181584905 ---GTTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCATA-G----ATGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35250 46 - 100774 ---GTTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCATA-G----ATGAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194129 46 + 218577 ---GTTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCGTA-G----ATGAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608420 46 - 91010382 ---GTTGGGCGAGGTGGGCGGCAGCTGTTACTTTCCCTGCGTA-G----ATGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12086 46 - 74206 ---GTTGGGCAAGGTGGGCAGCAGCTGTTACTTTCCCTGCGTA-G----ATGAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890918 46 + 1687011 ---GTTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCATA-G----ATGAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152714 46 - 204313951 ---GTCGGGTGAGGTGGGTGGAAGCTGTTACTCTCCCTGCGTA-G----ATGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114618 50 - 16417988 ---GTCGGGTGAGGTGGGTGGAAGCTGTTACTCTCCCTGCGTA-GATGAATGAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215537 47 + 306014 ---GTCGGGTGAGGTGGGTGGAAGCTGTTATTCTCTCTGCCTACG----ACGAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77080 46 + 211231 ---GTCGCGTGAGGTGGGTGGAAGCTGTTACTCTCCCTGCGTG-G----ATGAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44935 40 + 2165740 ---GTAAGGTGAGGTGTGTGAGAGTTG-GGTTCTCTCTTCATG-G--------- i otoGar3.GL873745 I 8 C 0 s mm10.chr13 46089847 44 - 120421639 ---GTTTGGACTCCTGGTCAGCA-CCACTAC-CCCCCTTCACA-G----ATGGT i mm10.chr13 I 3 C 0 s canFam3.chr34 30175146 44 - 42124431 ---CTCAGGCAAGTGGCTGGGGATCTACTCC--TCCCTTTATA-G----ATGAA i canFam3.chr34 I 8 I 191 s dasNov3.JH577625 550965 49 + 913073 GCTACTCTGTACGGTGGGTGGAAATTGCCACTGTCACTTTTTA-G----ATGAA i dasNov3.JH577625 C 0 I 222 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=219785.000000 s hg38.chr3_KI270779v1_alt 43624 29 + 205312 GAGGTGAACAGGGGGTAGAAGAGTCTGG---A s panTro5.chr3 200030833 29 + 202621043 GAGGTGAACAGGGGGTAGAAGAGTCTGG---A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13330 29 + 190779 GAGGTGAACAGCGGGTAGAAGAGTCTGG---A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868289 29 - 880730 GAGGTGAACAGGGGGTAGAAGAGTCTGG---A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 209985 29 + 180051392 GAGGTGAACAGGGGGTAGAAGAGTCTGG---A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274363 29 - 181584905 GAGGTGAACAGGGGGTAGAAGAGTCTGG---A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35296 29 - 100774 GAGGTGAACGGGGGGTAGAAGAGTCTGG---A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194175 29 + 218577 GAGGTGAACGGGGGGTAGAAGAGTCTGG---A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608466 29 - 91010382 GAGGTGAACGGGGGGTAGAAGAGTCTGG---A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12132 29 - 74206 GAGGTGAACGGGGGGTAGAAGAGTCTGG---A i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890964 29 + 1687011 GAGGTGAACGGCAGGTAGAAGAGTCTGG---A i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152760 29 - 204313951 TAGATGAACAGGGAGTAGAAGAGTCTGA---A i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114668 29 - 16417988 TAGATGAACAGGGAGTAGAAGAGTCTGA---A i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215584 32 + 306014 TAGATGAACAGGGAGTAGAAGAGAATAAGTGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77126 29 + 211231 TACATGAACAGGGAGTAGAAGGGTCTGA---A i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 44975 24 + 2165740 ----TGAGCAGTGGAT-GGAGAGTCTGG---A i otoGar3.GL873745 C 0 I 40 s mm10.chr13 46089891 5 - 120421639 CCTGT--------------------------- i mm10.chr13 C 0 C 0 e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=514360.000000 s hg38.chr3_KI270779v1_alt 43653 63 + 205312 ACATCAGTCTCCCCTGCTGATGTTCCTCCACCTGCCGTGCTCCTGGGTCTGAGCTGGAGCACA s panTro5.chr3 200030862 63 + 202621043 ACATCAGTCTCCCCTGCTGATGTTCCTCCACCTGCCGTGCTCCTGGGTCTGAGCTGGAGCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13359 63 + 190779 ACATCAGTCTCCCCTGCTGATGTTCCTCCACCTGCCGTGCTCCTGGGTCTGAGCTGGAGCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868318 63 - 880730 ACATCAGTCTCCCCTGCTGATGTTCCTCCACCTACCGTGCTCCTGGGTCTGAGCTGGAGCACA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210014 63 + 180051392 ACATCAGTGTCACCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCAGAGTGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274392 63 - 181584905 ACATCAGTGTCACCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGTGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35325 63 - 100774 ACATCAGTGTCACCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGTGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194204 63 + 218577 ACATCAGTGTCACCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGCGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608495 63 - 91010382 ACATCAGTGTCACCTACTGATGTTCCTCCACCTGCCGTGCTCCCAGGTCTGAGCTGGAGCGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12161 63 - 74206 ACATCAGTGTCACTTACTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGCGCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 890993 63 + 1687011 ACATCAGTGTCGCCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGCGCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152789 62 - 204313951 ACATCAGTCTCCC-TGCTGATGTTCCTCCACCTGCTGTGCTCTCGGGTCTGAGCCAGATCACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114697 54 - 16417988 ACATCGGTCTCCC---------CTGCTCTACCTGCTGTGCTCTCGGGTCTGAGCCAGATCACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215616 63 + 306014 ACATCGGTCTCCCCTGCTAATGTTCCTCCACCTGCTGTGCTCTCGGGTCTGAGCCAGATCACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77155 63 + 211231 ACATCGGTCTCCCCTACTGATGTTCCTCCACCTGCTGTGCTCTTGGGTCTGAGCCAGATCACA i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46089896 52 - 120421639 ---TCTCCTCCTCCCTTTAGTGTTCCATCACCTGTCATATTC------CTTAGTTAAATCA-- i mm10.chr13 C 0 C 0 e otoGar3.GL873745 44999 40 + 2165740 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=238561.000000 s hg38.chr3_KI270779v1_alt 43716 29 + 205312 GGT--GGTGAGGG----CCTCGGGAACATGGGACA s panTro5.chr3 200030925 29 + 202621043 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13422 29 + 190779 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868381 29 - 880730 GGT--GGTAAGGG----CCTCAGGAACATGGGACA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210077 29 + 180051392 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274455 29 - 181584905 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35388 29 - 100774 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194267 29 + 218577 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608558 29 - 91010382 AGT--GGTCAGGG----CCTCGGGAACATGGGACA i chlSab2.chr4 C 0 I 370 s manLeu1.NW_012101728v1 12224 29 - 74206 GGT--GGTGAGGG----CCTCGGGAACATGGGACA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891056 29 + 1687011 GGT--GGTGAGGG----CCTCGGGAACGTGGGACA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152851 30 - 204313951 GGTA-GGAGAGGT----CCTTGGGGACATAGGACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114751 30 - 16417988 GGTA-GGAGAGGT----CCCTGGGGACACAGGACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215679 31 + 306014 AGTAGGGAAAGGT----CCTTGGGGACATAGGACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77218 30 + 211231 GGTA-GGAGAGGT----CCTTGGGGACACAGGACA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45039 29 + 2165740 GGG--GGCAAGGT----CCTAAGGAGCACTGGATG i otoGar3.GL873745 I 40 C 0 s mm10.chr13 46089948 33 - 120421639 GGT--GGTGACTGACACTCTGGGAAACCTAAACCA i mm10.chr13 C 0 C 0 e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=14048.000000 s hg38.chr3_KI270779v1_alt 43745 6 + 205312 CGGGGG s panTro5.chr3 200030954 6 + 202621043 CGGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13451 6 + 190779 CGGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868410 6 - 880730 CGGGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210106 5 + 180051392 CAGGG- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274484 5 - 181584905 CAGGG- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35417 5 - 100774 CGGGG- i macNem1.NW_012013899v1 C 0 I 138 s cerAty1.NW_012004452v1 194296 5 + 218577 CGGGG- i cerAty1.NW_012004452v1 C 0 I 138 s chlSab2.chr4 89608957 5 - 91010382 TGGAG- i chlSab2.chr4 I 370 C 0 s manLeu1.NW_012101728v1 12253 5 - 74206 TGGGG- i manLeu1.NW_012101728v1 C 0 I 138 s colAng1.NW_012116910v1 891085 5 + 1687011 CGGGG- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152881 5 - 204313951 CGGAG- i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 114781 5 - 16417988 TGGAG- i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 215710 5 + 306014 TGGAG- i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 77248 5 + 211231 CGGAG- i aotNan1.NW_018494784v1 C 0 I 1 s otoGar3.GL873745 45068 3 + 2165740 TGG--- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46089981 0 - 120421639 C e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=8281.000000 s hg38.chr3_KI270779v1_alt 43751 1 + 205312 A s panTro5.chr3 200030960 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13457 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868416 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210111 1 + 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274489 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35560 1 - 100774 A i macNem1.NW_012013899v1 I 138 C 0 s cerAty1.NW_012004452v1 194439 1 + 218577 A i cerAty1.NW_012004452v1 I 138 C 0 s chlSab2.chr4 89608962 1 - 91010382 A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12396 1 - 74206 A i manLeu1.NW_012101728v1 I 138 C 0 s colAng1.NW_012116910v1 891090 1 + 1687011 A i colAng1.NW_012116910v1 C 0 I 157 s calJac3.chr2 152887 1 - 204313951 A i calJac3.chr2 I 1 C 0 s cebCap1.NW_016108150v1 215716 1 + 306014 A i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 77254 1 + 211231 A i aotNan1.NW_018494784v1 I 1 C 0 e otoGar3.GL873745 45071 0 + 2165740 C e mm10.chr13 46089981 0 - 120421639 C e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e saiBol1.JH378155 114786 1 - 16417988 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=581093.000000 s hg38.chr3_KI270779v1_alt 43752 78 + 205312 CAGTCGCAGATGCTGACATTGGAGGCCCTCTGACCTGCTTGT----AACAGCAGGTGCTCAGGGGCAGAGGGGAAACTGGGG s panTro5.chr3 200030961 78 + 202621043 CAGTCGCAGATGCTGACATTGGAGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTCAGGGGCAGAGGGGAAACTGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13458 78 + 190779 CAGTCGCAGATGCTGACATTGGAGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTCAGGGGCAGAGGGGAAACTGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868417 78 - 880730 CAGTCGCAGATGCTGACATTGGAGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTCAGGGGCAGAGGGGAAACTGGGG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210112 74 + 180051392 CAGTCGCAGACGCTGACATTAGGGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTC-AGGGCAGAGGGAAAT---GGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274490 74 - 181584905 CAGTCGCAGACGCTGACATTAGGGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTC-AGGGCAGAGGGAAAT---GGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35561 74 - 100774 CAGTCGCAGACGCTGACATTAGGGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTC-AGGGCAGAGGGAAAT---GGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194440 74 + 218577 CAGTCGCAGACGCTGACATTGGGGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTC-GGGGCAGAGGGAAAC---GGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89608963 73 - 91010382 CAGTCGCAGATGCCGACATT-GGGGTCCTCTGATACACTGGT----CACAGCAGGTGCTC-GGGGCAGGGGGAAAC---GGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12397 74 - 74206 CAGTCGCAGACGCTGACATTGGGGGTCCTCTGACCTGCTTGT----AACAGCAGGTGCTC-GGGGCAGAGGGAAAC---GGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891248 73 + 1687011 CAGTCGCAAATGCCGACATTGGGGGTCCTCTGATCTACTGGT----CACAGCAGGTGCTC-GGGGCA-AGGAAAAC---GGG i colAng1.NW_012116910v1 I 157 C 0 s calJac3.chr2 152888 76 - 204313951 CAGTCACAGATGCTGACATTGGAAGTCCTCTGACCTGCTTGT----AACAGCAGGTACTC--GGGCAGAGAGGAAACTGGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114787 76 - 16417988 -AGTCACAGATGCTGACATTGGAGGTCCTCTGACCTGCTTCT----AACAGCAGGTACTC-AGGGCAGAGAGGAAACGGGGG i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 215717 77 + 306014 CAGTCACAGATGCTGACATTGGAGGTCCTCTGACCTGCTTCT----AACAGCAGGTGCTC-AGGGCAGAGAGGAAACGGGGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77255 72 + 211231 CAGTCACAGATACTGACGTTGGAGGTCCTCTGAT---GTTGT----AACAGCAGGTGCTC--TGGCAGAGAGGAAACGGGG- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45071 59 + 2165740 -------------------TGGAGGCCATTTGGCCTACTCAG----TATGCTGAGTGTTCAGGGGCAAAGGGGGAAGTGGGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46089981 57 - 120421639 -------------------------TCCTTTGACCTGTTGGTAGCAAACAGCAAGAGTTTTGGAGCAAAAGGAGAACTGGGG i mm10.chr13 C 0 I 35 e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=4429.000000 s hg38.chr3_KI270779v1_alt 43830 2 + 205312 TA s panTro5.chr3 200031039 2 + 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13536 2 + 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868495 2 - 880730 GA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210186 2 + 180051392 GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274564 2 - 181584905 GG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35635 2 - 100774 GG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194514 2 + 218577 GG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89609036 2 - 91010382 GG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12471 2 - 74206 GG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891321 2 + 1687011 GA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152964 2 - 204313951 CA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114863 2 - 16417988 GA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215794 1 + 306014 -A i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77327 1 + 211231 -A i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45130 2 + 2165740 CA i otoGar3.GL873745 C 0 I 16 e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=365834.000000 s hg38.chr3_KI270779v1_alt 43832 44 + 205312 TACATTCGGAAGTTTCCTTCTGAAGAAGAGTAGCTATGGTCCTT s panTro5.chr3 200031041 44 + 202621043 TACATTCGGAAGTTTCCCTCTGAAGAAGAGTAGCTATGGTCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13538 44 + 190779 TACATTCGGAAGTTTCCCTCTGAAGAAGAGTAGCTATGGTCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868497 44 - 880730 TACATTCAGAAGTTTCCCTCTGAAGAAGAGTAGCTGTGGTCCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210188 44 + 180051392 GACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274566 44 - 181584905 GACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35637 44 - 100774 GACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 194516 44 + 218577 GACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i cerAty1.NW_012004452v1 C 0 I 2540 s chlSab2.chr4 89609038 44 - 91010382 GACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12473 44 - 74206 GACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891323 44 + 1687011 TACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 152966 44 - 204313951 TACATTTGGAAGTTTCCCTCTGAAGAAGAGTAGCTCTGGTCCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114865 35 - 16417988 TATATTCGGAAGTTTCCTTCTGAAGAAGAGTAGC---------T i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215795 44 + 306014 TATATTCGGAAGTTTCCCTCTGAAGAAGAGTAGCTGTGCTCCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77328 44 + 211231 TACATTCGGAAGTTTCCCTCTGAAGAAGAGTAACTATGGTCTTT i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=75916.000000 s hg38.chr3_KI270779v1_alt 43876 11 + 205312 ACTTCCTTCTT s panTro5.chr3 200031085 11 + 202621043 ACTTCCTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13582 11 + 190779 ACTTCCTTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868541 11 - 880730 ACTTCCTTCTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210232 11 + 180051392 ACCTCCCTCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274610 11 - 181584905 ACCTCCCTCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35681 11 - 100774 ACCTCCCTCTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609082 11 - 91010382 ACCTCCCTCTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12517 11 - 74206 CCCTCCCTCTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891367 11 + 1687011 ACCTCCCTCTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153010 11 - 204313951 ACTTCCCTCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 114900 11 - 16417988 ACTTCGCTCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215839 11 + 306014 ACTTCCCTCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77372 11 + 211231 ACTTCCCtctt i aotNan1.NW_018494784v1 C 0 I 20 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=141880.000000 s hg38.chr3_KI270779v1_alt 43887 34 + 205312 AGATATGGTCTTTACTTCCCtctc-------------------------tttgtttctt s panTro5.chr3 200031096 34 + 202621043 AGATATGGTCTTTACTTCCCTCTC-------------------------tttgtttctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13593 34 + 190779 AGATATGGTCTTTACTTCCCTCTC-------------------------tttgtttctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868552 34 - 880730 AGATATGGTCTTTACTTCCCTCTC-------------------------tttgtttctt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210243 30 + 180051392 AGATGTGGTCTTTCCTTCC----C-------------------------tttttgtctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274621 30 - 181584905 AGATATGGTCTTTCCTTCC----C-------------------------tttttttctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35692 30 - 100774 AGATATGGTCTTTCCTTCC----C-------------------------tttttttctt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609093 32 - 91010382 AGATATGGTCTTTCCTTCC--CTC-------------------------tttttttctt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12528 30 - 74206 AGATATGGTCTTTCCTTCC----C-------------------------tttttttctt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891378 31 + 1687011 AGATAT-GTCTTTCCTTCC--CTC-------------------------tttttttctt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153021 34 - 204313951 AGATGTGGTCTTTACTTCCCtctc-------------------------tttatttttt i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 114911 59 - 16417988 AGATGTGCTCTTTTCTTCCCTCTCTTTTTATttgttttttggttttttttttttttttc i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 215850 41 + 306014 AGATGTAGTCTTTGCTTCCCTCTCtttttat------------------ttattttttt i cebCap1.NW_016108150v1 C 0 I 1 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e aotNan1.NW_018494784v1 77383 20 + 211231 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=656135.000000 s hg38.chr3_KI270779v1_alt 43921 95 + 205312 ggagatggagactcgctc--tgtcgcttaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct s panTro5.chr3 200031130 97 + 202621043 ggagatggagactcgctctgtgtcgcttaggctggagtgcaatggcacgatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13627 97 + 190779 ggagatggagactcgctctgtgtcgcttaggctggagtgcaatggcacgatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868586 95 - 880730 ggagatggagactcgctc--tgtcacttaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210273 95 + 180051392 ggagattcagtctcgctc--tgtcgcttaggctggagtacaatggcgcaatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274651 95 - 181584905 ggagattcagtctcgctc--tgtcgcttaggctggagcacaatggcgcaatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35722 95 - 100774 ggagattcagtctcgctc--tgtcgcttaggctggagcacaatggcgcaatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609125 95 - 91010382 ggagattcagtctcgctc--tgtcgcttaggctggagtgcagtggcgcaatcttggctcactgcaacctccgccttccaggttcaagcgattcttct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12558 95 - 74206 ggagattcagtctcgctc--tgttgcttaggctggagtgcagtggcacaatcttggctcactgcaacctccgcctcccaggttcaagcgattcttct i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891409 92 + 1687011 ggagattcagtctcgctc--tgtcgcttaggctggagcacaatggtgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattct--- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153056 94 - 204313951 ggagatggagtctcactc--tgtcgcccagactggagtgcaatgacgcaatctcagctgattgcaacctccgcct-cctaattcaaatgattcttcc i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 114971 94 - 16417988 ggagatggagtctcactc--tgttgcccaggctagagtgcagtgacgcgatctcagctcactacagcctccacct-ccaagttcaagtgattcttcc i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 215892 94 + 306014 agagatggagtctcactc--tgtcgcccaggctggagtgcaatgacgcgatctcagctcactgcaacctccgcct-ccaagttcaagtgattcttcc i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 77403 94 + 211231 ggagacggagtctcactc--tgtcgcccaggctggagtgcaatgatgcgatctcagctcactgcaacctctgcct-ccaagttcaagtgattcttcc i aotNan1.NW_018494784v1 I 20 C 0 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=707537.000000 s hg38.chr3_KI270779v1_alt 44016 135 + 205312 gcctcagcctcccgagtagctgggattacaggcacctgccatcatgcctggctaatttttatatttttagttgagacggggtttcaccatgttagccagac--aggtctcgaacccctgaactcaggtgatccaccc s gorGor5.CYUI01015759v1 868681 135 - 880730 gcctcagcctcccgagtagctgggattacaggcacccgccatcatgcctggctaatttttgtatttttagttgagacggggtttcaccatgttagccagac--aggtctcgaaccactgaactcaggtgatccaccc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210368 135 + 180051392 gcctcagcctcccgagtagctgggattataggcactcgccgtcatgcctcactaatttttgtatttttagttgagacggggtttcaccatgttagccaggc--aggtctcgaacccctgacctcaggtgatccaccc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274746 135 - 181584905 gcctcagcctcccgagtagctgggattataggcactcgccgtcatgcctcactaatttttgtatttttagttgagacggggtttcaccatgttagccaggc--aggtctcgaacccctgacctcaggtgatccaccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35817 135 - 100774 gcctcagcctcccgagtagctaggattataggcactcgccgtcatgcctcactaatttttgtatttttagttgagacggggtttcaccatgttagccaggc--aggtctcgaacccctgacctcaggtgatccaccc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609220 135 - 91010382 gcctcagcctcccgagtagctgggattacaggcactcgccatcatgcctggctaatttttgtatttttagttgagacggggtttcaccatgatagccagac--aggtctcgaacccctgacctcaggtgatccaccc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12653 135 - 74206 gcctcagcctcccgagtagctgggattacaggcactcgccatcatgcctggctgatttttgtatttttagttgagatggggtttcaccatgttagccagac--agatctcgaacccctgacctcaggtgatccaccc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891501 132 + 1687011 ---tcagcctcctgagtagctgggattataggcacccgccatcatgcctggctaatgtttgtatttttagttgagacggggtttcaccatgttagccaggc--aggtcttgaacccctgacctcaggtgatccaccc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153150 134 - 204313951 acctcagcctcccgggtagctgggattacaggcacccaccatcatgcttggctaatttttgcacttttagtaaagacagggtttcaccat-ttagccaggc--tggtcttgaacccctgatctcaggtgatccactc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115065 135 - 16417988 ccctcagcctcccgggtagctggaattacaggcacccgtcatcatgcttggctaatttttgtacttttagtagagatagggtttcaccatattaaccagtc--tggtcttgaacccctgatctcaggtgatccaccc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 215986 135 + 306014 acctcagcctccctggtagctgggattacaggcacccgccatcatgcttggctaatttttgtacttttagtagagacagggtttcaccttattactcaggc--tggtcttgaacccctgatctcaggtgatccgccc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77497 137 + 211231 accttaacctcccaggtagctggggttacaggcatctgccatcattctcggctaatttttgtacttttagtagagacacggtttcaccatattagccagacgggggtcttgaacccctgatctcaggcgatccaccc i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e panPan2.chrUn_NW_014024201v1 13724 0 + 190779 C e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro5.chr3 200031227 0 + 202621043 C a score=249305.000000 s hg38.chr3_KI270779v1_alt 44151 35 + 205312 gcctcagcctcccaaagtgctgggattacaagcgt s panTro5.chr3 200031227 35 + 202621043 gcctcagcctcccaaagtgctgggattacaagcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13724 35 + 190779 gcctcagcctcccaaagtgctgggattacaagcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868816 35 - 880730 gcctcagcctcccaaagtgctgggattacaggcgt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210503 35 + 180051392 gcctcaacctcccaaagtgctgggattacaggcgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274881 35 - 181584905 gcctcaacctcccaaagtgctgggattacaggcgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35952 35 - 100774 gcctcaacctcccaaagtgctgggattacaggcgt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609355 35 - 91010382 gcctcaacctcccaaagtgctgggattataggcgt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12788 35 - 74206 gcctcaacctcccaaagtgctgggattacaggcgt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891633 35 + 1687011 gcctcaacctcccaaagtgctgggattacaggtat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153284 34 - 204313951 acctcagccttccaaagtgtt-ggattacaggcat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115200 34 - 16417988 gcctcagccttccaaagtgtt-ggattacaggcat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216121 34 + 306014 gcctcagccttccaaagtgtt-ggattacaggcat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77634 34 + 211231 gcctcagccttccaaagtgtt-ggattacaggtgc i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e canFam3.chr34 30175190 191 - 42124431 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=101189.000000 s hg38.chr3_KI270779v1_alt 44186 19 + 205312 gagccactgcatgcccgac s panTro5.chr3 200031262 19 + 202621043 gagccactgcatgcccgac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13759 19 + 190779 gagccactgcatgcccgac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868851 19 - 880730 gagccactgcatgcccggc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210538 17 + 180051392 gagccaccgc--gcctggc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274916 17 - 181584905 gagccaccgc--gcctggc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 35987 17 - 100774 gagccaccgc--gcctggc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609390 17 - 91010382 gagccaccgc--gcctggc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12823 17 - 74206 gagccaccgc--gcctggc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891668 16 + 1687011 g-gccaccgc--gcctggc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153318 16 - 204313951 gagcca-tgc--gcccagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115234 17 - 16417988 gagccactgc--gcccggc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216155 17 + 306014 gagctgctgc--gcccggc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77668 17 + 211231 gagccactgc--gcccggc i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30175381 19 - 42124431 GATCCAGTCCTTACCTGCC i canFam3.chr34 I 191 C 0 e otoGar3.GL873745 45132 16 + 2165740 I e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=31862.000000 s hg38.chr3_KI270779v1_alt 44205 5 + 205312 cTAC--T s panTro5.chr3 200031281 5 + 202621043 CTAC--T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13778 5 + 190779 CTAC--T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868870 5 - 880730 cTAC--T i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210555 5 + 180051392 cTAC--T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274933 5 - 181584905 cTAC--T i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36004 5 - 100774 cTAC--T i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609407 7 - 91010382 cTACCTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12840 5 - 74206 cTAC--T i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891684 5 + 1687011 cTAC--T i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153334 5 - 204313951 cTGC--T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115251 5 - 16417988 cTGC--T i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216172 5 + 306014 cTGC--T i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77685 5 + 211231 cTGC--T i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45148 5 + 2165740 CTAA--C i otoGar3.GL873745 I 16 C 0 s canFam3.chr34 30175400 5 - 42124431 CTCC--A i canFam3.chr34 C 0 C 0 e mm10.chr13 46090038 35 - 120421639 I e dasNov3.JH577625 551014 222 + 913073 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=35384.000000 s hg38.chr3_KI270779v1_alt 44210 3 + 205312 TCC s panTro5.chr3 200031286 3 + 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13783 3 + 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868875 3 - 880730 TCC i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210560 3 + 180051392 TCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274938 3 - 181584905 TCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36009 3 - 100774 TCC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609414 3 - 91010382 TCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12845 3 - 74206 TCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891689 3 + 1687011 TCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153339 3 - 204313951 TCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115256 3 - 16417988 TCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216177 3 + 306014 TCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77690 3 + 211231 TCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45153 3 + 2165740 TTC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30175405 3 - 42124431 TCC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 551236 3 + 913073 TCC i dasNov3.JH577625 I 222 C 0 e mm10.chr13 46090038 35 - 120421639 I e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=632374.000000 s hg38.chr3_KI270779v1_alt 44213 77 + 205312 CTCTCTTTCTCTGACCTGCAGCACAGACACCCTGTTGAGGGAGGTGGGCTTGTGGAGGAATGGGCATCTTGACA---------TTT s panTro5.chr3 200031289 77 + 202621043 CTCTCTTTCTCTGACCTGCAGCACAGACACCCTGTTGAGGGAGGTGGGCTTGTGGAGGAATGGGCATCTTGACA---------TTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13786 77 + 190779 CTCTCTTTCTCTGACCTGCAGCACAGACACCCTGTTGAGGGAGGTGGGCTTGTGGAGGAATGGGCATCTTGACA---------TTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868878 77 - 880730 CTCTCTTTCTCTGACCTGCAGCACAGACACCTTGTTGAGGGAGGTGGGCTTGTGGAGGAATAGGCACCTTGACA---------TTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210563 77 + 180051392 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGCTGGGGGAGGTAGGCTGGTGGAGGTATGGGCACCTTGACA---------TTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180274941 77 - 181584905 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGCTGGGGGAGGTGGGCTGGTGGAGGTATGGGCACCTTGACA---------TTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36012 77 - 100774 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGCTGGGGGAGGTAGGCTGGTGGAGGTATGGGCACCTTGACA---------TTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609417 77 - 91010382 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGTTGGGGGAGGTGGGCTGGTGGAGGTATGGGCACCTTGACA---------TTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12848 77 - 74206 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGCTGGGGGAGGTGGGCTGGTGGAGGTACGGGCACCTTGACA---------TTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891692 77 + 1687011 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGCTGGGGGAGGTGGCCTGGTGGAGGTATGGGCACCTTGACA---------TTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153342 76 - 204313951 CTCTCTTTCTCTGACCTGCAGCACAGATACCCTGTTGGGGGAGGTGGGCTTGTGGAGGCATGGGCACCTTGAC----------CTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115259 86 - 16417988 CTCTCTTTCTCTGACCTGTAGCACAGATACCCTGTTGGGGAAGGTGGGCTTGTGGAGGCATGGGCACCTTGACCATCTGAAATCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216180 76 + 306014 CTCTCTTTCTCTGACCTGCAGCACAGATACCCTGTTGGGG-AGGTGGGCTTGTGGAGGCATGGGCACCTTGACC---------TTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77693 73 + 211231 ----CTTTCTCTGACCTGCAGCACAGAAACCCTGTTGGGGGAGGTGGGCTTGTGGAGGCATGGGCACCTTGACA---------TTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45156 63 + 2165740 CTCCCCTTCTCTGACAGATGGCACAGATGCCTTATTTAGGGAGACAG--------------AGGTACCTTGAAA---------TTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46090073 76 - 120421639 CTTTACTTTTGCTACTTCAGGCATAGGAAGTCTGCC-AGGGAAGCAGGCATATGGACGCATAGGTATTTTGTTG---------CTT i mm10.chr13 I 35 C 0 s canFam3.chr34 30175408 69 - 42124431 -------TCTCTGCCCCTGCATGCAGACATCCCCTGCTGGGAAGCAGACGGGTACAAAC-TGTGCTCCTAAAGT---------CTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 551239 75 + 913073 CCCTACCCTCCCAGCCTAACACGCAGGTACTCCACTGAGGGAAGCAGGCCTGGGAAGACGT-TGCATGTTGATG---------TT- i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 194560 2540 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=461962.000000 s hg38.chr3_KI270779v1_alt 44290 38 + 205312 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGG s panTro5.chr3 200031366 38 + 202621043 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13863 38 + 190779 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868955 38 - 880730 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210640 38 + 180051392 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275018 38 - 181584905 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36089 38 - 100774 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 197100 38 + 218577 CACCTGAAACCTTCCTTTCC-ACAGGTCCTGAGGCACGG i cerAty1.NW_012004452v1 I 2540 I 66 s chlSab2.chr4 89609494 38 - 91010382 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 12925 38 - 74206 CACCTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 891769 38 + 1687011 CACTTGAAATCTTCCTTTCC-ACAGGTCCTGAGGCACGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153418 35 - 204313951 CACCTGAAA---TCTTTTCC-ACAGGTCCTGAGGCACGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115345 38 - 16417988 CACCTGAAATCTTCTTTTCC-ACAGGTCCTGAGGCACGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216256 38 + 306014 CACCTGAAATCTTCTTTTCC-ACAGGTCCTGAGGCATGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 77766 38 + 211231 CACCTGAAATCTTCTTTTCC-ACAGGTCCTGAGGCACGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45219 38 + 2165740 TATCTGAAATCTGCTTTTCC-ACAGGTCCTGAAGCACGT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46090149 34 - 120421639 CATCTGAAATATTCCT-----ACAGGTGCTGAAGCATGT i mm10.chr13 C 0 C 0 s canFam3.chr34 30175477 31 - 42124431 CAC------TCTTCCT-CCT-ACAGGTTCTGAGGCACGT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 551314 39 + 913073 CATCCTAACTCTTTTTGCCTGATAGGTTCTACGGCATGT i dasNov3.JH577625 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2291403.000000 s hg38.chr3_KI270779v1_alt 44328 205 + 205312 GAATGGCCAGGATCAGATTGTGCCCAGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCTGCACATGGTGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-ACCCAGACTATTTGAGAAGGC-GCAGGAGGTT s panTro5.chr3 200031404 205 + 202621043 GAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTTGGCACATGGTGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-ACCCAGACTATTTGAGAAGGC-ACAGGAGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 13901 205 + 190779 GAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGCACATGGTGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-ACCCAGACTATTTGAGAAGGC-GCAGGAGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 868993 205 - 880730 GAATGGCCAGGATCAGATTGTGCCCAGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGTCAACCGCCTCGGGGCAAACTCACTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCAGCCCTGGTAAGTGTTTTCTG-CAGG-ACCCAGACTATTTGAGAAGGC-GCAGGAGGTT i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210678 207 + 180051392 GAATGGCCAGGATCAGATTGTGCCCGGGCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCCCTCTTGGACCTGGTCGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTTCGAGAAGGC-GCGGGAGGTT i rheMac8.chr6 C 0 I 2 s macFas5.chr6 180275056 207 - 181584905 GAATGGCCAGGATCAGATTGTGCCCGGGCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCCCTCTTGGACCTGGTCGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTCTGAGAAGGC-GCAGGAGGTT i macFas5.chr6 C 0 I 2 s macNem1.NW_012013899v1 36127 207 - 100774 GAATGGCCAGGATCAGATTGTGCCCGGGCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCCCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTTCGAGAAGGC-GCAGGAGGTT i macNem1.NW_012013899v1 C 0 I 2 s chlSab2.chr4 89609532 207 - 91010382 GAATGGCCAGGATCAGATTGTGCCCGGGCTATACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGTAAGTGTTTCCTT-CAGG-AGCCAGACTGTCTGAGAAGGC-GCAGGAGGTT i chlSab2.chr4 C 0 I 2 s manLeu1.NW_012101728v1 12963 207 - 74206 GAATGGCCAGGATCAGATTGTGCCTGGGCTGTACGCCTGTGGGGAGGCTGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCAGCCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTCTGAGAAGGC-GCAGGAGGTT i manLeu1.NW_012101728v1 C 0 I 2 s colAng1.NW_012116910v1 891807 207 + 1687011 GAATGGCCAGGATCAGATTGTGCCCGGGCTGTACGCCTGTGAGGAGGCCGCTTGTGCCTTGGTACATGGTGCCAACCGGCTTGGGGCAAACTTGCTCTCGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATATAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTTTGAGAAGGC-GCAGGAGGTT i colAng1.NW_012116910v1 C 0 I 2 s calJac3.chr2 153453 205 - 204313951 GAATGGCCAGGATCAGATCGTGCCTGGCCTGTACGCCTGTGGGGAGGCCGCCTGCGCCTCAGTCCATGGTGCCAACCGTCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGCCGGGCCTGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGTGAGTGTTTTCTT-CAGA-AGCCAGACCATTTGAGAAGG---CAGGAGGTT i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 115383 205 - 16417988 GAATGGCCAGGATCAGATCGTGCCCGGCCTGTATGCCTGTGGGGAGGCCGCCTGCGCCTCAGTCCATGGTGCCAACCGCCTTGGGGCAAACTCACTCTTGGACCTGGTTGTCTTTGGCCGGGCCTGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGTGAGTGTTTTCTT-CAGA-AGCCAGACCATTTGAGAAGG---CAGGAGGTT i saiBol1.JH378155 C 0 I 4 s cebCap1.NW_016108150v1 216294 205 + 306014 GAATGGCCAGGATCAGATTGTGCCCGGCCTGTATGCCTGTGGGGAGGCTGCCTGCGCCTCAGTCCATGGTGCCAACCGTCTTGGGGCAAACTCACTCTTGGACTTGGTTGTCTTTGGCCGGGCTTGTGCCTTGAGCATCGAAGAGTCATGCAGGCCTGGTGAGTGTTTTCTT-CAGA-AGCCAGACTATATGAGAAGG---CAGGAGGTT i cebCap1.NW_016108150v1 C 0 I 4 s aotNan1.NW_018494784v1 77804 205 + 211231 GAATGGCCAGGATCAGATTGTACCCGGCCTGTATGCCTGTGGGGAGGCCGCCTGCGCCTCAGTCCATGGTGCCAACCGTCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGCCGAGCCTGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGTGAGTGTTTTCTT-CAGA-AGCCAGACTGTTTGCGAAGG---CAGGAGGTT i aotNan1.NW_018494784v1 C 0 I 4 s otoGar3.GL873745 45257 205 + 2165740 GGACGGGCAAGATCAGATCGTGCCTGGCTTGTATGCCTGTGGGGAGGCTGCCTGTGCCTCAGTGCATGGCGCCAACAGGCTTGGGGCAAATTCACTCTTGGACTTGGTCGTCTTTGGGCGAGCATGTGCCCTGAGCATTGAAGAATCTTGCAGGCCTGGTACGTGTTTTCTT-CAAGTAGTTAGGCAGTGTCAGAGGGC-A---GAGGTT i otoGar3.GL873745 C 0 I 229 s mm10.chr13 46090183 203 - 120421639 GAATGGCCAGGATCAGATTGTGCCTGGTCTGTATGCCTGTGGGGAGGCTGCCTGCGCCTCAGTGCATGGTGCCAACCGGCTTGGAGCAAATTCTCTCTTGGACCTTGTAGTCTTTGGCAGAGCCTGTGCCCTGAGCATTGCAGAATCTTGCAGGCCTGGTATGTGTTCTCTTCCAGC-TCTCAAGCCATTCTAGGAGCCTGCAT------ i mm10.chr13 C 0 C 0 s canFam3.chr34 30175508 206 - 42124431 GAATGGCCAGGATCAGATTGTGCCTGGCCTGTATGCATGCGGGGAGGCCGCCTGCGCCTCGGTGCACGGTGCCAACCGCCTCGGAGCCAACTCGCTCTTGGACTTGGTCGTCTTTGGCCGGGCATGTGCCCTGAGTATCGCAGAGTCCTGCAGACCTGGTATGTGTTTTCTT-CAAGTAGCCAGGCTATTTCAGGAGGT---GAGAGGTT i canFam3.chr34 C 0 I 4 s dasNov3.JH577625 551353 186 + 913073 GAACGGCAAGGACCAAATCGTGCCTGGGCTGTATGCCTGTGGGGAGGCCGCCTGTGCCTCCGTCCACGGTGCCAACCGGCTTGGCGCAAACTCCCTCCTGGACCTGGTGGTCTTTGGCCGTGCGTGCGCCCTGAGTATCGCGGAGTCTTGCAGACCCGGTATGTGTGTCCTC-CAGC-AGACAAGCTG---------------------- i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 197138 66 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=27724.000000 s hg38.chr3_KI270779v1_alt 44533 14 + 205312 AGt---------cttttttcttt s panTro5.chr3 200031609 14 + 202621043 AGT---------Cttttttcttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14106 13 + 190779 AGT---------Cttttttc-tt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869198 14 - 880730 AGT---------Cttttttcttt i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210887 13 + 180051392 AGt---------tgtttttc-tt i rheMac8.chr6 I 2 C 0 s macFas5.chr6 180275265 13 - 181584905 AGT---------CGtttttc-ct i macFas5.chr6 I 2 C 0 s macNem1.NW_012013899v1 36336 13 - 100774 AGt---------tgtttttc-tt i macNem1.NW_012013899v1 I 2 C 0 s chlSab2.chr4 89609741 13 - 91010382 AGt---------tgtttttc-ct i chlSab2.chr4 I 2 C 0 s manLeu1.NW_012101728v1 13172 13 - 74206 AGt---------tgtttttc-tt i manLeu1.NW_012101728v1 I 2 C 0 s colAng1.NW_012116910v1 892016 13 + 1687011 AGT---------CGtttttc-tt i colAng1.NW_012116910v1 I 2 C 0 s calJac3.chr2 153662 23 - 204313951 AGTTATGAAGtctttttttcttt i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 115592 14 - 16417988 AGT---------Ctttttttttt i saiBol1.JH378155 I 4 C 0 s cebCap1.NW_016108150v1 216503 13 + 306014 AGT----------Cttttttttt i cebCap1.NW_016108150v1 I 4 C 0 s aotNan1.NW_018494784v1 78013 14 + 211231 AGt---------ctttctttttt i aotNan1.NW_018494784v1 I 4 C 0 s mm10.chr13 46090386 14 - 120421639 AGT---------CTTTATTTGTT i mm10.chr13 C 0 I 813 s canFam3.chr34 30175718 10 - 42124431 TGT---------CTTGATT---- i canFam3.chr34 I 4 C 0 s dasNov3.JH577625 551539 1 + 913073 ------------------T---- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e cerAty1.NW_012004452v1 197138 66 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=105702.000000 s hg38.chr3_KI270779v1_alt 44547 17 + 205312 ttttttgagacagggtc s panTro5.chr3 200031623 17 + 202621043 ttttttgagacagggtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14119 17 + 190779 ttttttgagacagggtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869212 17 - 880730 ttttttgagacagggtc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210900 16 + 180051392 tcttttgagaca-ggtc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275278 16 - 181584905 ttttttgagaca-ggtc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36349 16 - 100774 ttttttgagaca-ggtc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609754 16 - 91010382 ttttttgagaca-ggtc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 13185 16 - 74206 ttttttgagaca-ggtc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892029 16 + 1687011 ttttttgagaca-ggtc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153685 17 - 204313951 ttttttgagacagggtc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115606 17 - 16417988 ttttttgagacagggtc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216516 17 + 306014 tttttaaagactgggtc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78027 17 + 211231 ttttttgagacagggtc i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30175728 17 - 42124431 TGTAATTGGAAATTGCC i canFam3.chr34 C 0 I 188 s dasNov3.JH577625 551540 15 + 913073 TTTCTGAAGGCAGGA-- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e cerAty1.NW_012004452v1 197138 66 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=238371.000000 s hg38.chr3_KI270779v1_alt 44564 29 + 205312 agcccaggctggagtgcagtggcacagtc s panTro5.chr3 200031640 29 + 202621043 agcccaggctggagtgcagtggcacagtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14136 29 + 190779 agcccaggctggagtgcagtggcacagtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869229 29 - 880730 agcccaggctggagtgcagtggcacagtc i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210916 29 + 180051392 agcccaggctggagtgccgtggcacagtc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275294 29 - 181584905 agcccaggctggagtgccatggcacagtc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36365 29 - 100774 agcccaggctggagtgccatggcacagtc i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609770 29 - 91010382 agcccaggctggagtgccgtggcacagtc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 13201 29 - 74206 agcccaggctggagtgccgtggcacagtc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892045 29 + 1687011 agcccaggctggagtgccatggcacagtc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153702 29 - 204313951 agcccaggctggagtgcagtggcacagtc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115623 29 - 16417988 agcccaggctggagtgcagtggcacagtc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216533 29 + 306014 agcccaggctggagtgcagtggcacagta i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78044 29 + 211231 agcccaggctggaatgcagtggcacagtc i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 551555 12 + 913073 -----------------AGTTGCAAAGTC i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e canFam3.chr34 30175745 188 - 42124431 I e cerAty1.NW_012004452v1 197138 66 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=785639.000000 s hg38.chr3_KI270779v1_alt 44593 101 + 205312 atagcagcctcaacctcccgagctcaagcagtcctcaacacctcaaccttcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa s panTro5.chr3 200031669 101 + 202621043 atagcagcctcaacctcccgagctcaagcagtcctcaacacctcaaccttcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14165 101 + 190779 atagcagcctcaacctcccgagctcaagcagtcctcaacacctcaaccttcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869258 101 - 880730 atagcagcctcaacctcccgagctcaagcagtcctcagcacctcaaccttcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 210945 101 + 180051392 atagctgcctcaacctcccgggctcgagcagtcctcaacacctccacctgcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275323 101 - 181584905 atagccgcctcaacctcccgggctcgagcagtcctcaacacctccacctgcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36394 101 - 100774 atagccgcctcaacctcccgggcttgagcagtcctcaacacctccacctgcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89609799 101 - 91010382 atagccgcctcaacctcccaggctcgagcagtcctcaacacctccacctacagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 13230 101 - 74206 atagccgcctcaacctcccgggctcgagcagtcctcaacacctccacctgcagagtcccaagtagctgggactacagatgtgcaccaccatacctggctaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892074 101 + 1687011 atagccgcctcaacctcccgggctcgagcagtcctcaacacctccacctgtagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153731 101 - 204313951 atggcagcctcagcctcctgggctcaagcagtccttaacaccccaaccttcagagtcccaagtagctggaactacaggtgtgcacccccacacctggctac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115652 101 - 16417988 atggcagcctcagcctcctgggctcaagcagtccttaacacctcaaccttcagagtcccaagtagctgggactacaggtgtgcaccaccacacctggttaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216562 101 + 306014 atggcagcctcagcctcctgggctcaagcagtccttaacacctcaaccttcagattcccaagtagctgggactgcaggtgtgcacccccacacctggctaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78073 101 + 211231 atggcagcctcagcctcctgggctcaagcagtccttagcacctcaatcttcagagtcccaagtagctgggactacaggcgtgcaccaccacacctggctaa i aotNan1.NW_018494784v1 C 0 I 27 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e dasNov3.JH577625 551567 0 + 913073 C e canFam3.chr34 30175745 188 - 42124431 I e cerAty1.NW_012004452v1 197138 66 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=277.000000 s hg38.chr3_KI270779v1_alt 44694 12 + 205312 -----------tttaaaaaaatt s panTro5.chr3 200031770 12 + 202621043 -----------tttaaaaaaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14266 11 + 190779 -----------tttaaaaaaaa- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869359 11 - 880730 -----------tttaaaaaaaa- i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 211046 12 + 180051392 -----------tttaaaaaaaaa i rheMac8.chr6 C 0 I 2 s macFas5.chr6 180275424 12 - 181584905 -----------tttaaaaaaaaa i macFas5.chr6 C 0 I 2 s macNem1.NW_012013899v1 36495 12 - 100774 -----------tttaaaaaaaaa i macNem1.NW_012013899v1 C 0 I 2 s chlSab2.chr4 89609900 12 - 91010382 -----------tttaaaaaaatt i chlSab2.chr4 C 0 I 2 s manLeu1.NW_012101728v1 13331 12 - 74206 -----------tttaaaaaaatt i manLeu1.NW_012101728v1 C 0 I 2 s colAng1.NW_012116910v1 892175 12 + 1687011 -----------ttttaaaaagtt i colAng1.NW_012116910v1 C 0 I 2 s calJac3.chr2 153832 11 - 204313951 ttttttattt-----------t- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115753 18 - 16417988 ttttttttttttttt----aat- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216663 22 + 306014 ttttgtttgtttttttttaaat- i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e dasNov3.JH577625 551567 0 + 913073 C e canFam3.chr34 30175745 188 - 42124431 I e aotNan1.NW_018494784v1 78174 27 + 211231 I e cerAty1.NW_012004452v1 197138 66 + 218577 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=39776.000000 s hg38.chr3_KI270779v1_alt 44706 7 + 205312 ttttttg s panTro5.chr3 200031782 7 + 202621043 ttttttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14277 7 + 190779 ttttttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869370 7 - 880730 aattttt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789501 7 + 123690457 ttttttt i nomLeu3.chr11 I 3854 C 0 s rheMac8.chr6 211060 6 + 180051392 -tttttt i rheMac8.chr6 I 2 C 0 s macFas5.chr6 180275438 6 - 181584905 -tttttt i macFas5.chr6 I 2 C 0 s macNem1.NW_012013899v1 36509 6 - 100774 -tttttt i macNem1.NW_012013899v1 I 2 C 0 s chlSab2.chr4 89609914 6 - 91010382 -tttttt i chlSab2.chr4 I 2 C 0 s manLeu1.NW_012101728v1 13345 6 - 74206 -tttttt i manLeu1.NW_012101728v1 I 2 C 0 s colAng1.NW_012116910v1 892189 6 + 1687011 -tttttt i colAng1.NW_012116910v1 I 2 C 0 s calJac3.chr2 153843 7 - 204313951 ttttttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115771 7 - 16417988 ttttttt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216685 7 + 306014 ttttttt i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e dasNov3.JH577625 551567 0 + 913073 C e canFam3.chr34 30175745 188 - 42124431 I e aotNan1.NW_018494784v1 78174 27 + 211231 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=494287.000000 s hg38.chr3_KI270779v1_alt 44713 61 + 205312 g----tagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagt-c s panTro5.chr3 200031789 61 + 202621043 g----tagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagt-c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14284 61 + 190779 g----tagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagt-c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869377 62 - 880730 g----tagagacagggtctcacagtattgcccaggctggtcttgaactcctagactgaaacagtcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789508 62 + 123690457 g----tagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagtcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 211066 61 + 180051392 g----tagaaacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagt-c i rheMac8.chr6 C 0 I 1613 s macFas5.chr6 180275444 61 - 181584905 g----tagaaacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagt-c i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 36515 61 - 100774 g----tagaaacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagt-c i macNem1.NW_012013899v1 C 0 I 1 s chlSab2.chr4 89609920 63 - 91010382 tgt--tagagacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagt-c i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 13351 65 - 74206 ttttgtagagacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagt-c i manLeu1.NW_012101728v1 C 0 I 1 s colAng1.NW_012116910v1 892195 59 + 1687011 tg---tagagacagggtctcacaatattgcccaggctggtcttgaa---ctagacccaaacagt-c i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153850 61 - 204313951 ----gcagagacagggtctcacaatgttgcccaggctgatctggaactcctagactgaaacagt-c i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115778 61 - 16417988 ----gtagagacagggtctcacaatgttgcccaggctgatctggaactcctagactgaaacagt-c i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216692 61 + 306014 ----gtagagacagggtctcacaatgttgcccaggctgatctggaactcctagactgaaacagt-c i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78201 61 + 211231 ----gtagagacagggtctcacaatgttacccaggctgatctggaactcctagactgaaacagt-c i aotNan1.NW_018494784v1 I 27 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e dasNov3.JH577625 551567 0 + 913073 C e canFam3.chr34 30175745 188 - 42124431 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=593533.000000 s hg38.chr3_KI270779v1_alt 44774 70 + 205312 -ttctgcctcagctttccaaagtattgggattacaggcatgagccactgcacccagccAGGTTACAAAGCC s panTro5.chr3 200031850 70 + 202621043 -ttctgcctcagcttcccaaagtattgggattacaggcatgagccactgcacccagccAGGTTACAAAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14345 70 + 190779 -ttctgcctcagcttcccaaagtattgggattacaggcatgagccactgcacccagccAGGTTACAAAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869439 70 - 880730 -ttctgcctcagcttcccaaagtattgggattacaggcatgagccactgcacccagccAGGTTACAAAGCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789570 70 + 123690457 -ttctgcctcagcttcccaaactattgggattacaggcatgagccactgcacccagccAGGTTACAAAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 212740 70 + 180051392 -ttctgcctcagcttcccaaagtactgggattacagacatgagccacggcacccagccAGGTTACAAAGCC i rheMac8.chr6 I 1613 C 0 s macFas5.chr6 180275506 70 - 181584905 -ttctgcctcagcttcccaaagtactgggattacagacatgagccacggcacccagccAGGTTACAAAGCC i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 36577 70 - 100774 -ttctgcctcagcttcccaaagtactgggattacagacatgagccacggcacccagccAGGTTACAAAGCC i macNem1.NW_012013899v1 I 1 C 0 s chlSab2.chr4 89609984 70 - 91010382 -ttctgcctcagcttcccaaagtactgggattacagacatgagccacggcacccagccAGGTTACAAAGCC i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 13417 70 - 74206 -ttctgcctcagcttcccaaagtattgggattacagacatgagccacgacccccagccAGATTACAAAGCC i manLeu1.NW_012101728v1 I 1 C 0 s colAng1.NW_012116910v1 892254 59 + 1687011 ------------ctgcctaaagtactgggattacagacatgagccactgcacccagccGGGTCACAAAACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153911 71 - 204313951 cttctctctcagcttcccagagtgttgggattacaggcatgagcccccacccccagccAGGTTACAAAGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115839 71 - 16417988 cttctgcctcagtttcccaaagtgttaggattacaggcttgagccactgcacccagccAGGTTACAAAGCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216753 71 + 306014 cttctgcctcagtttcccaaagtgttgggattacaggcctgagccactgcacccagccAGGTTACAAAGCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78262 70 + 211231 c-tctgtctcagcttcccaaagtattgggattacagggatgagccactgcacccagccAGGTTACAAAGCC i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e dasNov3.JH577625 551567 0 + 913073 C e canFam3.chr34 30175745 188 - 42124431 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=560418.000000 s hg38.chr3_KI270779v1_alt 44844 61 + 205312 TTGATTTCTTACTGGAAATTTGCGTAGTGAGCATATAGAGGTAGTCTGG----GTTTTTTCCCCT s panTro5.chr3 200031920 61 + 202621043 TTGATTTCTTACTGGAAATTTGCTTAGTGAGCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14415 61 + 190779 TTGATTTCTTACTGGAAATTTGCTTAGTGAGCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869509 61 - 880730 TTGATTTGTTACTGGAAATTTGCTTAGTGATCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789640 60 + 123690457 TTGATTTGTTACTGGAAATTGGCTTAGTGATCATATAGAGGTAGTCTGG----GTTTTTTCCCC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 212810 61 + 180051392 TCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275576 61 - 181584905 TCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36647 61 - 100774 TCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610054 61 - 91010382 TCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 13487 61 - 74206 TCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892313 61 + 1687011 TCAATTTGTTGCTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGG----GTTTTTTCCCCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 153982 61 - 204313951 TTGATTTCTTCCTGGAAATTTGCTTAGTGATCATATAGTGGTCGTCTGG----GTTTTTTCCCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115910 60 - 16417988 TTGATTTCTT-CTGGAAATTTGCTTAGTGATCATATAGAAGTAGTCTGG----TTTTTTTCTCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216824 60 + 306014 TTGATTTCTT-CTGGAAACTTGCTTAGTGATCATATAGAAGTAGTCTGG----GTTTTTTCCCCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78332 61 + 211231 TTGATTTCTTCCTGGAAATTTGCTTAGTGATCATATAGAGGTAGTCTGG----GTTTCTTCCCCT i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 551567 65 + 913073 TTGATTTTTAACTGGAAATGTGCTTAGTCATCATTTGGTTGTATTCTGACTCTTTTTTTTCCCCT i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e canFam3.chr34 30175745 188 - 42124431 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=593733.000000 s hg38.chr3_KI270779v1_alt 44905 67 + 205312 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT s panTro5.chr3 200031981 67 + 202621043 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14476 67 + 190779 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869570 67 - 880730 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATATTGAGACTAGATAGAGGCTGGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789700 67 + 123690457 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGCCATGTTGAGACTAGATAGAGGCTGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 212871 67 + 180051392 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275637 67 - 181584905 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36708 67 - 100774 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610115 67 - 91010382 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 13548 67 - 74206 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892374 67 + 1687011 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154043 67 - 204313951 AGAAGTGATGATACTGAGAAATCTAGAGATTGTCTGGTGGTAATGTTGACACCAGATAGAGGCTGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 115970 67 - 16417988 AGAAGTGATTATACTGAGAAATCTAGAGATTATCTGGTGGTAATGCTGATACCAGATAGGGGCTGGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216884 67 + 306014 AGAAGTGATTATACTGAGAAGTCTGGAGATTATCTGGTGGTAATGTTAGCACCAGATAGAGGCTGGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78393 48 + 211231 AGAAGTCATTAAACTGAGAAATCTAGGG-------------------GACACCAGATAGAGGCTGCT i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30175933 60 - 42124431 aaGAGAGAGAAAAGAAAGAGAT-------TTCTACAGTAATAGACTTGGGACTCGACACAGGCTAGG i canFam3.chr34 I 188 C 0 s dasNov3.JH577625 551632 63 + 913073 AGAAGCAAGGAAACAGTGAGGTCCAGAGATTCTCTAGTGGTAGAGTT---ACTAGACATGGG-TGGT i dasNov3.JH577625 C 0 I 10 e otoGar3.GL873745 45462 229 + 2165740 I e mm10.chr13 46090400 813 - 120421639 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=662595.000000 s hg38.chr3_KI270779v1_alt 44972 82 + 205312 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTACATTTTTTTTTTTTAA--ATTATT--TTGCAGTCATTATTTTCTGTTT s panTro5.chr3 200032048 82 + 202621043 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTACATTTTTGTTTTTTTA--ATTATT--TTGCAGTCATTATTTTCTGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14543 82 + 190779 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTACATTTTTGTTTTTTTA--ATTATT--TTGCAGTCATTATTTTCTGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869637 82 - 880730 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTCACATGTTTTTTTTTTTA--ATTATT--TTGCAGTCATTATTTTCTGCTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789767 81 + 123690457 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTAC-TTTTTTTTTTTTTA--ATTATT--TTGCGGTCATTATTTTCTGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 212938 81 + 180051392 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTAC-GTTTTTTTTTTTAA--ATTATT--TTGTAGTCATTATGTTCTGCTT i rheMac8.chr6 C 0 I 317 s macFas5.chr6 180275704 81 - 181584905 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTAC-TTTTTTTTTTTTTA--ATTATT--TTGTAGTCATTATGTTCTGCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36775 80 - 100774 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTAC--TTTTTTTTTTTTA--ATTATT--TTGTAGTCATTATGTTCTGCTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610182 80 - 91010382 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTAC--TTTTTTTTTTTAA--ATTATT--TTGTAGTCATTATGTTCTGCTT i chlSab2.chr4 C 0 I 313 s manLeu1.NW_012101728v1 13615 81 - 74206 TGGGGATCTTAACAAT--TAAGATG--ACATTTTTGGGGTTAC-ATTTTTTTTAAAAA--ATTATT--TTGTAGTCATTATGTTCTGCTT i manLeu1.NW_012101728v1 C 0 I 314 s colAng1.NW_012116910v1 892441 76 + 1687011 TGGGGATCTTAACAGT--TAAGGTG--ACATTTTTGGGGTTTC---TTTTTTTAAAAA--ATTATT--TTGCAGTC---ATGTTCTGCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154110 79 - 204313951 TGGGGATCTTAACTAT--TAAGGTG--ACATTTTTGGGGTTAC---ATTTTTAAAAAA--ATTATT--TTGCAGTCATTATGTTCTGCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116037 78 - 16417988 TGGGAATCTTAACTAT--TAAGGTG--ATTTTTTGGGGGTTAC---ATTTTT-AAAAA--ATTATT--TTGCAGTCATTATGTTCTGCTT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 216951 78 + 306014 TGGGGATCTTAACTAT--TAAGGTG--ACATTTTGGGGGTTAC---ATTTTT-AAAAA--ATTATT--TTGCAGTCATTATGTTCTGCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78441 79 + 211231 TGGGGATCTTAACTAT--TAAGGTG--ACATTTTGGGGGTTAC---ATTTTTTTAAAA--ATTATT--TTGCAGTCATTATGTTCTGCTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45691 79 + 2165740 CAGGGGTCCTAACAGT--TAAAAAGGTAAATACTGGGGGTCACATTTTGTTTCTTCTA--GTTATT-------AATATTGTGTTCTGCTT i otoGar3.GL873745 I 229 C 0 s canFam3.chr34 30175993 76 - 42124431 TGTGGGTCCTAACAGT--TTATGTA--G-------AGGGTAAC-CTAGTTTTGGTCAGGTATTGTT--TTGCAGTTATTATGTTCTCCTT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 551705 71 + 913073 CGGGGGTCTTGTAGGTAAGAAGGTA--AAGTTTCTTTGGTCAT--------------A--CCTGTTCTTTGCAGT-GCTGTGTTCTGCTT i dasNov3.JH577625 I 10 C 0 e mm10.chr13 46090400 813 - 120421639 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=148817.000000 s hg38.chr3_KI270779v1_alt 45054 15 + 205312 AGAAAAA-GCACTATT s panTro5.chr3 200032130 15 + 202621043 AGAAAAA-GCACTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14625 15 + 190779 AGTAAAA-GCACTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869719 15 - 880730 AGAAAAA-GCACTATT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789848 15 + 123690457 AGAAAAA-GCACTATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213336 15 + 180051392 agaaaaa-GCACTATT i rheMac8.chr6 I 317 C 0 s macFas5.chr6 180275785 15 - 181584905 AGAAAAC-GCACTAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36855 15 - 100774 AGAAAAC-GCACTATT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610575 15 - 91010382 agaaaaa-GCACTATT i chlSab2.chr4 I 313 C 0 s manLeu1.NW_012101728v1 14010 15 - 74206 agaaaaa-GCACTATT i manLeu1.NW_012101728v1 I 314 C 0 s colAng1.NW_012116910v1 892517 15 + 1687011 AGAAAAA-GCACTATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154189 15 - 204313951 AGAAAAA-GCACTATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116115 10 - 16417988 -----AA-GCACTATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217029 15 + 306014 AGAAAAA-GCACTATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78520 15 + 211231 AGAAAAACGCAC-ATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45770 15 + 2165740 AGAAAAG-ACGTTATT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30176069 15 - 42124431 AGAAAAG-TCACTATG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 551776 15 + 913073 GGAAAAG-TCACTACT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46090400 813 - 120421639 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=1016677.000000 s hg38.chr3_KI270779v1_alt 45069 89 + 205312 AGGAAGCTGTTATTTTTAGGG-------------GAAGTTCATTACGTATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG s panTro5.chr3 200032145 88 + 202621043 AGGAAGCTGTTATTTTTAGGG-------------GAAGTTCATTATGTATTACTTGCC-GATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14640 89 + 190779 AGGAAGCTGTTATTTTTAGGG-------------GAAGTTCATTACGTATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 869734 86 - 880730 AGGAAGC--TTATTTTTAGGG-------------GAAGTTCATTACGTATTACTTGCT-GATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789863 89 + 123690457 AGGAAGTTGTTATTTGTAGGG-------------GAATTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213351 89 + 180051392 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275800 89 - 181584905 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTAAATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36870 89 - 100774 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610590 89 - 91010382 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14025 89 - 74206 AGGAAGTTGTTATTTTTAGAG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892532 89 + 1687011 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154204 89 - 204313951 AGGAAATTGCTATTTTTAGGG-------------GAAGTTCATTACATGTTACTTGCTTGATAAAAAGCACTTGTTTGCAATGAAATATTTTAAGTAGTTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116125 88 - 16417988 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAAGCAC-TGTTTGCAATGAAATATTTTAAGTAATTGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217044 89 + 306014 AGGAAGTTATTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAAGCACTTGTTTGCAATGAAATATTTTAAGTAGTTGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78535 89 + 211231 AGGAAGTTGTTATTTTTAGGG-------------GAAGTTCATTACATATTACTTGCCTGATAAAAAGCACTCGTTTGCAATGAAATATTTTAAATAGTTGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45785 102 + 2165740 AGGAAATTGTTATTTTGAAGGTAAACTTCCCTTCAAAGTTTATTGCATATTACTTTCCTGAAATAAATTACTTACTTGCAATGAAATATTTTAAATAGTATG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091213 81 - 120421639 aAGAAATTGGTATTTTGAGGG-------------AAAGTTGATTACATATTATTTGTCTGTTATAAATTA--TGTTTGCAGTCCAATATT---AATAGT--- i mm10.chr13 I 813 C 0 s canFam3.chr34 30176084 84 - 42124431 -GGAA----TTGTTTTGAGGA-------------GAAGTTTATCACACAGTGCTTGCTCAGTATAAATTATTTACTTGCTATGAAATATTTTAAAGAGTAGG i canFam3.chr34 C 0 I 147 s dasNov3.JH577625 551791 80 + 913073 TGGACATTGTTATTTTGAGGG-------------GAAGTTTATTATATATTATTTGTCTGATATAAATTACT---------TGAAATATTTTAAACTGTAGG i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=1711443.000000 s hg38.chr3_KI270779v1_alt 45158 192 + 205312 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-G-----TACAACTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGTGAACAG---------GATT---------CCCACCCTCTACGGACAGATTCGATTTCACTTGCTGGTTTTCTTTTCAGGATAGCGTCAAATAATGTGCAGGAA-AAGGA-ATAC s panTro5.chr3 200032233 197 + 202621043 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAACTGTAGCTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGGGAACAG---------GATT---------CCCACCCTCTACGGACAGATTCAATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGCGGGAA-AAGAA-ATAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 14729 197 + 190779 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAACTATAGCTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGGGAACAG---------GATT---------CCCACCCTCTACGGACAGATTCGATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGCGGGAA-AAGAA-ATAC i panPan2.chrUn_NW_014024201v1 C 0 I 186 s gorGor5.CYUI01015759v1 869820 197 - 880730 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAACTATAGCTACCCTCTATTAGAGGAGAAGGGCTGACTTAGAGTGAACAG---------GATT---------CCCACCCTCTATGGACAGATTCGATTTCACTTGCTGGTTTTCTTTTCATGATGGCGTCAAATAATGTGCAGGAA-AAGAA-ATAC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120789952 197 + 123690457 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAAGTACAACTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGTGAACAG---------GATT---------CCCACCCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGACAGTGTCAAATAACGTGCAGGAA-AAGAA-ATAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213440 193 + 180051392 TGTGAATGA-----------------------------------------ATATGTAACAT----GTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAAGTACAGCTAGCCTCTATTAGAGGAGAAGGGATGACTTACAGTGAACAG---------AATT---------CCCACTCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGTAGGAG-AAGAA-ATAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180275889 194 - 181584905 CATGAACAA-----------------------------------------ATACGTAACTT---GGTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAAGTACAGCTAGCCTCTATTAGAGGAGAAAGGATGACTTAGAGTGAACAG---------GATT---------CTCACTCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGATAGCATCAAATAATGTGTAGGAG-AAGAA-ATAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 36959 193 - 100774 TGTGAATGA-----------------------------------------ATATGTAACAT----GTACTTA--GAAAAATAATTTAGGCCATTCTAAAA-ACAAAGTACAGCTAGCCTCTATTAGAGGAGAAGGGATGACTTACAGTGAACAG---------AATT---------GCCACTCTCTATGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGTAGGAG-AAGAA-ATAC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610679 183 - 91010382 TGTGAATGA-----------------------------------------ATATGTAACAT---G---------GAAAAATAATTTAGGCCATTCTAAAA-ACAAAGTACAGCTAGCCTCTATTAGAGGAGAAGGGATGACTTACAGTGAACAG---------GATT---------CCCA--CTCTACGGAC--ATTGGGTTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGTAGGAG-AAGAA-ATAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14114 194 - 74206 TGTGAATGA-----------------------------------------ATATGTAACAT---GGTACTTA--GAAATATAATTTAGGCCATTCTAAAA-ACAAAGTACAGCTAGCCTCTATTAGAGGAGAAGGGATGACTTATAGTGAACAG---------AATT---------CCCATCCTCTATGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGTAGGAG-AAGAA-ATAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892621 193 + 1687011 CGTGAACGA-----------------------------------------ATATGTAACTT---GGTACTTA--GAAAAA-ACTTTAGGCCATTCTGAAA-ACAAAGTACAGCTGGCCTCTATTAGAGGAGAGGGGACGACTTACAGTAAACAG---------GATT---------CCCACCCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGGTAGCGTCAAATAATGTGTAGGAG-AACAA-ATAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154293 193 - 204313951 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCCTTCTAAAA-ACAAAGTGCAACTAATCTC-ATTAGAAGAGAAGGGATGACTTAAAGCGAACCG---------GATT---------CTC-CCCTCCGGTGACAG--TGGATTTCACTTGGTGGTTTTCTTTTCATGATAGCACAGAGTAGTGTGCAGGAG-AAGAA-ATAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116213 195 - 16417988 CATGAATGA-----------------------------------------ATATGTAAGTTCTCGGTACTTA--GAAAAATAATTTAGGCCCTTCTAAAA-ACAAAGTGCAACTAATCTCTATTAGAGGATAAGGGATGACTTAAAGTGAACAG---------GATT---------CCCACCCTCCAGTGACAG--TGGATTTCGCTCGCTGGTTTTCTTTTCATGATAGCATAGAATAGTGTGCAGAAG-AAGAA-TTAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217133 195 + 306014 CATGAATGA-----------------------------------------ATATGTAACTTCTCAGTACTTA--GAAAAATAATTTAGGCCCTTCTAAAA-GCAAAGTGCAACTAATCTCTATTAGAGGAGAAGGAATGACTTAAAGCAAATGG---------GATT---------CTCACCCTCCAGTGACAG--TGGATTTCACTCGGTGGTTTTCTTTCCATGATAGCATAGAATAGTGTGCAGGAG-AAGAA-ATAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78624 192 + 211231 CATTAATGA-----------------------------------------ATATATAACTTCTCGGTACTTA--GAAAAATAATTTAGGCCCTTCTAAAA-ACAAAGTGCAACTAATCTCTATTAGAGGAGAAGGGATGACTGAAAGCGAACAG---------GATT---------CCC-CCCTCCAGTGAC----TGGATTTCACTTGGTGGTTTTCTTTTCGTGATAGCATAGAATAGTGTGCAGGAG-AAGAA-ATAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 45887 200 + 2165740 CATAAATGA-----------------------------------------CTATATAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCACTCTAAAA-A---AGTATAATTAATCTTTAATAAAGGAAAAGGGATAAC--AAAATAAAAGATTGGATGTTGGTT---------CCCATCATC-AGTGATACAATGGGTTTTGGTCAGTGGTTTTCTTCTTGGGGTAGCTTAAAATAATGTATAGGAG-AAAAA-GTGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091294 171 - 120421639 -AAAAATGA-----------------------------------------ATCTGTAACTTCTTGGTAATTG--TAGAAAAATTTTAGACTGTTTTAAAA-ACAAGATTTAG--AATTCCATTTATAAAAGAA----TGAC---------ATAG------------T---------CCTACCCCACAGGGATAGAAAGAATTTCAGTTGA-GGTTTTCTT---ATGGTAGCTTAAAAC----TGTAAAAG-AAAAATGTAC i mm10.chr13 C 0 C 0 s canFam3.chr34 30176315 241 - 42124431 catgaataaataaataaaatcttaaaaaaaaaAAAAAAGTAGGTGTGAATATATATAAGTTCTCAATATTTATGGAAAAGTAATTTAGG---TTCTTAAA-A---AATATAAATAA--TCTGTTAAAGGAGAACATAATGCACACAAAACAGAG---------CATTGGGTCATAGCCCTCCCTTCCGTGATACAGTGGATTTCAGTCTGTGATTCTGTTCTTCTGGCAACTTAAAATAATTTGCTGAGG-AAAAA-ACAC i canFam3.chr34 I 147 C 0 s dasNov3.JH577625 551871 179 + 913073 TGTAAATGAATA--------------------------------------ATAAGTGAACTTCATGCATATA--GAAAATATGTTTAAACTTTTCTAAAACACAAAATATAATTATTTTTTAT----GGAAAGGG------------TAAATGA---------TAGC---------TTATCCCTGCAGGGATAGAATGGCTGTCA---GTTGATTTTCTTCT---GGTAGC-TTAAATAACCTGCAAGAGTAAAAA-ATAT i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=247061.000000 s hg38.chr3_KI270779v1_alt 45350 31 + 205312 CGTGTG----TGGGAGTGTGAGTCTTA--TGTGCACG s panTro5.chr3 200032430 31 + 202621043 CGTGTG----TGGGAGTGTGAGTCTTA--CGTGCACG i panTro5.chr3 C 0 I 155 s panPan2.chrUn_NW_014024201v1 15112 31 + 190779 CGTGTG----TGGGAGTGTGAGTCTTA--TGTGCACC i panPan2.chrUn_NW_014024201v1 I 186 C 0 s gorGor5.CYUI01015759v1 870017 31 - 880730 CGTGTG----TGGGAGTGTGAGTCTTA--CGTGCACG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790149 31 + 123690457 CACGTG----TGGGAGTGTGAGTCTTA--CGTGCACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213633 31 + 180051392 CATGTG----TGGGAGTGTGAGTCTCA--TGTGCACT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276083 31 - 181584905 CATGTG----TGGGAGTGTGAGTCTCA--TGTGCACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37152 31 - 100774 CATGTG----TGGGAGTGTGAGTCTCA--TGTGCACT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610862 31 - 91010382 CGTGTG----TGGGAGTGTGAGTCTCA--TGTGCACT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14308 31 - 74206 CGTGTG----TGGGAGTGTGAGTCTCA--TGTGCACT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892814 31 + 1687011 CATGTG----TGGGAGTGTGAGTCTCA--TGTTCACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154486 31 - 204313951 CATGTG----CTGCAGTGTGGGTCTTA--CGTGCACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116408 31 - 16417988 CATGTG----CTGGAGCTTGAGTCTTA--TGTGCCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217328 31 + 306014 CATGTG----CTGGAGCGTGAGTCTTA--CGTGCACT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78816 31 + 211231 CGTGTG----CTGGAGCGTGAGTCTTA--TGTGCACT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46087 34 + 2165740 CATGTTC---TCAAAGTCTGAGTCCACATCGTACACT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091465 30 - 120421639 CTTGTG----TTGGAGTGT-AGTTTTG--TTTGTACA i mm10.chr13 C 0 I 3 s canFam3.chr34 30176556 29 - 42124431 TCTGTGC---TGGAAGTGTGAATCCT---TCTGTA-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 552050 19 + 913073 ------CTGCTGAAAGCGTGAGTCC------------ i dasNov3.JH577625 C 0 C 0 e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=823394.000000 s hg38.chr3_KI270779v1_alt 45381 96 + 205312 AAGAACAGGACAGTTAGCATCGTTCCCA-CCTCCAGAGA-TCCTCACGGTGGTCATGCAGCCTCGTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAGGCAC s panTro5.chr3 200032616 96 + 202621043 AAGAGCAGGACAGTTAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATGCAGCCTCGTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAGGCAC i panTro5.chr3 I 155 C 0 s panPan2.chrUn_NW_014024201v1 15143 96 + 190779 AAGAGCAGGACAGTGAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGTTTATGCAGCCTCGTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAGGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870048 96 - 880730 AAGAACAGGACAGTTAGCATCGCTCGCA-CCTCCAGAGA-TCTTCACGGTGGTTATGCAGCCTCCTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAGGCAC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790180 96 + 123690457 AAGAACAGGACAGTTAGCATCACTCCCA-CCTCCAGAGA-TGTTCACGGTGGTTATCCAGCCTCCTGTGCTCAGAA---CAGTA-TG--AGGTGG------ATGAGGCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213664 96 + 180051392 AAGAACGGGACAGTTAGCATCACTCTCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCATGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAAGCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276114 96 - 181584905 AAGAACAGGACAATTAGCATCACTCTCA-CCTCCAGAGA-TCTTCACGGTAGTTATCCAGCCTCGTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGGGGCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37183 96 - 100774 AAGAACGGGACAGTTAGCATCACTCTCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCATGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAAGCAC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610893 96 - 91010382 AAGAATGGGACAGTTAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCGTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAAGCAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14339 96 - 74206 AAGAACGGGACAGTTAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCATGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGGGACAC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892845 96 + 1687011 AAGAACAGGACAGTTAGTGTCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCGTGTGCTCAGAA---CAGTG-TG--AGGTGG------ATGAGGCAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154517 95 - 204313951 AAAAACTGGACACTTAGCCTCGCTCCCA--CTTCAGAGA-TCTTCATGGTGGTCATCCAGCCTCGTTTCCTCAGAA---CACTG-TG--AGGTGG------AGGAGGCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116439 95 - 16417988 AAAATCTGGACACTTAGCATCACTCTCG--CTTCAGAGA-TCTTCACGGTGGTCATCCAGCCTCGTTTGCTCAGAA---CAGTG-TG--AGGTGG------AGGAGGCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217359 95 + 306014 AAAATCTGGACACTCAGCACCACTCCCA--CTTCAGAGA-TCTTCACGGTGGTTATCCAGCGTCGTTTGCTCAGAA---CAGTG-TG--AAGTGG------AGGAGGCAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78847 95 + 211231 AAAAACTGGACACTTAGCCTCGCTCCCA--CTTCAGAGA-TCTTCACGGTGGTCATCCAGCCTCGTTTGCTCAGAA---CAGTG-TG--AGGTGG------CGGAGGCAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46121 94 + 2165740 AGGAGCAGTATAGTTGCCATTTCTCTGA-CCTACAAGGA-T-TTCATGGCAGCTATCCAGCCTC-TTTGCTTCATA---GGGGA-TA--TGGTGC------AGGAAGCAC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091498 103 - 120421639 CAGAACCAGGAGGTTACTAGAGCGCCAG-CCTCTAAGGAGCCTTCATGGTAGCTGTTTTGTCT-GTTTTCTTAGAATAGCAGTA-TG--AAATAATACCTCATGAGGA-- i mm10.chr13 I 3 C 0 s canFam3.chr34 30176585 94 - 42124431 ---AATGGGACGCTTACTGTTGCTATGAGCTTCCAGAGGGTCTTCATGTGGGTTACGTTGGCCCATTCGTTCACGA---CGACA-TGTTAGGTGA---------AGACAC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 552069 73 + 913073 ---------------AGTGAAGTCCCGT-TAATCAGAGC-----CAGGGTGGTAGTGCCTCCT-----GCTTGGAC---CCACACTG--CAGTAG------ATGGGATGC i dasNov3.JH577625 C 0 I 92 e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=29505.000000 s hg38.chr3_KI270779v1_alt 45477 4 + 205312 T-------GGT s panTro5.chr3 200032712 4 + 202621043 T-------GGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15239 4 + 190779 T-------GGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870144 4 - 880730 T-------GGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790276 4 + 123690457 T-------GGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213760 4 + 180051392 C-------GGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276210 4 - 181584905 C-------GGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37279 4 - 100774 T-------GGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610989 4 - 91010382 C-------GGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14435 4 - 74206 C-------GGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892941 4 + 1687011 C-------GGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154612 4 - 204313951 T-------GGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116534 4 - 16417988 T-------GGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217454 4 + 306014 T-------GGT i cebCap1.NW_016108150v1 C 0 I 150 s aotNan1.NW_018494784v1 78942 4 + 211231 T-------GGT i aotNan1.NW_018494784v1 C 0 I 8 s otoGar3.GL873745 46215 11 + 2165740 CCAGCCTAGGT i otoGar3.GL873745 C 0 I 38 e mm10.chr13 46091601 0 - 120421639 C e dasNov3.JH577625 552142 92 + 913073 I e canFam3.chr34 30176679 0 - 42124431 C e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=22131.000000 s hg38.chr3_KI270779v1_alt 45481 3 + 205312 GGA s panTro5.chr3 200032716 3 + 202621043 GGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15243 3 + 190779 GGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870148 3 - 880730 GGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790280 3 + 123690457 GGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213764 3 + 180051392 GGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276214 3 - 181584905 GGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37283 3 - 100774 GGA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610993 3 - 91010382 GGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14439 3 - 74206 GGA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892945 3 + 1687011 GGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154616 3 - 204313951 AGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116538 3 - 16417988 AGA i saiBol1.JH378155 C 0 I 138 s otoGar3.GL873745 46264 3 + 2165740 aga i otoGar3.GL873745 I 38 I 5 e mm10.chr13 46091601 0 - 120421639 C e dasNov3.JH577625 552142 92 + 913073 I e canFam3.chr34 30176679 0 - 42124431 C e aotNan1.NW_018494784v1 78946 8 + 211231 I e cebCap1.NW_016108150v1 217458 150 + 306014 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=490003.000000 s hg38.chr3_KI270779v1_alt 45484 111 + 205312 TGTTTGCGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------GTTCTT------------------CCCGTTAGCTTTCTCTGGTGTTA------------------ACTGTTTAGCATCATTTCTGCTGTTTTTATAGAACAGGCGCTTTT s panTro5.chr3 200032719 111 + 202621043 TGTTTGCGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------GTTCTT------------------CCCGTTACCTTTCTCTGGTGTTA------------------ACTGTTTAGCATCATTTCTGCTGTTTTTATAGAACAGGCGCTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15246 111 + 190779 TGTTTGTGTGGCAAGGATGGTGGGACCCCC----GGCCCAC-----------GTTCTT------------------CCCGTTAGCTTTCTCTGGTGTTA------------------ACTGTTTAGCATCATTTCTGCTGTTTTTATAGAACAGGCGCTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870151 111 - 880730 TGTTTGCGTGGCAAAGATGGTGGGACCCCA----GGCCCAC-----------GTTCTT------------------CCCGTTAGCTTTCTCTGGTGTTA------------------ACGGTTGAGCATCATTTCTGCTGTTTTTATAGAACAGGCGCTTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790283 111 + 123690457 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------GTTCTT------------------CCCGTTACGTTTCTCTGGTGTTA------------------ACTGTTTAGCATGATTTCTGCTGTTTTTATAGAACAGGTGCTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213767 111 + 180051392 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------ATTCTT------------------CCCGTTACCTTTCTCTGGTGTTA------------------ACTGTTTGGCATCCTTTCTGCTGTTTTAATAGAACAGGTGCTTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276217 111 - 181584905 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------ATTCTT------------------CCCGTTACCTTTCTCTCATGTTA------------------ACTGTTTGGCATCATTTCTGCTGTGTTTATAGAACAGGTGGTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37286 111 - 100774 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------ATTCTT------------------CCCGTTACCTTTCTCTGGTGTTA------------------ACTGTTTGGCATCCTTTCTGCTGTTTTAATAGAACAGGTGCTTTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89610996 111 - 91010382 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------ATTCTT------------------CCCGTTACCTTTCTCTGGTGTTA------------------ACTGTTTGGCATCATTTCTGCTGTGTTTATAGAACAGGTGGTTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14442 111 - 74206 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------ATTCTT------------------CCCGTTACCTTTCTCTGGTGTTA------------------ACTGTTTGGCATCCTTTCTGCTGTTTTAATAGAACAGGTGCTTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 892948 111 + 1687011 TGTTTGTGTGGCAAGGATGGTGGGACCCCA----GGCCCAC-----------ATTCTT------------------CCCGTTACCTTTCTCTGGTGTTA------------------ACTGTTTGGTATCCTTTCTGCTGTGTTTATAGAACAGGTGCTTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154619 17 - 204313951 ---------------------------------------------------------------------------------------------------------------------ACTGG-------------TGCTGTTTGTAT--------------- i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 46272 156 + 2165740 ggttctcctgggtagagtgctgatgcatcatcatagctcacagcaacctcaaattcctgggcttaagtgatccacccacctcagcctcccagagtgctaggattacaggcgtgaaccacagcacctggcCACTGCAGCTGTTTTTATAGAGCAAAT------ i otoGar3.GL873745 I 5 C 0 s mm10.chr13 46091601 84 - 120421639 ---------GGCATAGA------GATCCCT----CTCCCTG-----------TTCCAT------------------CCATTTTTCTTTCCTC--TGTTA------------------CTTGT---GGATGTCAGTTGTAGTTGATATAGAGCGGG------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30176679 111 - 42124431 TGTTCCCCAAGGGAGGGTTGTGGGATCCCT----GGGCCCC-----------TCTCTT------------------CCCGTTATGCTTCACTGGTGGTA------------------ACTGTTTAGTCTCAGTTGTTCTGTTTTTATCAAACAAAAGTTTTT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 552142 92 + 913073 I e aotNan1.NW_018494784v1 78946 8 + 211231 I e cebCap1.NW_016108150v1 217458 150 + 306014 I e saiBol1.JH378155 116541 138 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=-13837.000000 s hg38.chr3_KI270779v1_alt 45595 3 + 205312 TGC s panTro5.chr3 200032830 3 + 202621043 TGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15357 3 + 190779 TGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870262 3 - 880730 TGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790394 3 + 123690457 TGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213878 1 + 180051392 T-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276328 1 - 181584905 T-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37397 1 - 100774 T-- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611107 1 - 91010382 T-- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14553 1 - 74206 T-- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893059 1 + 1687011 T-- i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 116679 3 - 16417988 TAC i saiBol1.JH378155 I 138 C 0 s aotNan1.NW_018494784v1 78954 3 + 211231 TGC i aotNan1.NW_018494784v1 I 8 C 0 s otoGar3.GL873745 46428 1 + 2165740 T-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091685 3 - 120421639 TGC i mm10.chr13 C 0 C 0 s canFam3.chr34 30176790 1 - 42124431 T-- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 552142 92 + 913073 I e cebCap1.NW_016108150v1 217458 150 + 306014 I e calJac3.chr2 154636 0 - 204313951 C e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=65255.000000 s hg38.chr3_KI270779v1_alt 45598 14 + 205312 TTTTT------GTATGGACT s panTro5.chr3 200032833 14 + 202621043 TTTTT------GTATGGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15360 14 + 190779 TTTTT------GTATGGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870265 14 - 880730 TTTTT------GTATGGACT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790397 20 + 123690457 TCTGTTGAAAAGAGCAAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213879 9 + 180051392 -----------GTGTGGATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276329 9 - 181584905 -----------GTATGGATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37398 9 - 100774 -----------GTGTGGATT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611108 9 - 91010382 -----------GTGTGGATT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 14554 9 - 74206 -----------GTGTGGATT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893060 9 + 1687011 -----------GTATGGATT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154636 5 - 204313951 ---------------GGATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116682 14 - 16417988 TTTTT------GTGTGGATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217608 14 + 306014 TTTTT------GTATGGATT i cebCap1.NW_016108150v1 I 150 C 0 s aotNan1.NW_018494784v1 78957 14 + 211231 TTTTT------GTATGGATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46429 14 + 2165740 TTTTT------GTATGGATT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091688 14 - 120421639 GTTCT------GGATGAACA i mm10.chr13 C 0 C 0 s canFam3.chr34 30176791 8 - 42124431 ------------TATGGATT i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 552142 92 + 913073 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=2446914.000000 s hg38.chr3_KI270779v1_alt 45612 291 + 205312 CAA---G-------TGA---AATAAAAACTAGCACCGCCGT-ACCTTA---TAAACATG---ACCCTTTTCTATCTGTAGTTAGAAAGGTACAGGCAGTA---TTA--AAAGGGTAGC-TAC-----TTCAGACACTGTGTCTCTGTGGATCTGACG-ACAG-CTCAGGAGGCCAGCACATGCAGAGCCGGCGTCTCATCCCCAGCCGTTGCTGATCATCGGCGAAGGCGGAGTTCAGGTGCCTCG-CTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTCGCAGTGAGGTCTGATACCACTTCTCT s panTro5.chr3 200032847 291 + 202621043 CAA---G-------TGA---AATAAAAACTAGCACTGCCGA-ACCTTA---TAAACATG--CACCCTTTTATATCTGTAGTTAGAAAGGTACAGGTAGTA---TTA--AAAGGGTAGC-TAC-----TTCAGACACTCTGTCTCTGTGGATCTGACG-ACAG-CTCAGGAGGCCAGCACATGCAGAGCTGGCGTCTCATCCCAAGCCGTTGCTGATCATCGGCGAAGGCGGAGTTCAGGTGCATCA-TTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTG-AGCAGTGAGGTCTGATACCACTTCTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15374 291 + 190779 CAA---G-------TGA---AATAAAAACTAGCACTGCCGA-ACCTTA---TAAACATG--CACCCTTTTATATCTGTAGTTAGAAAGGTACAGGTAGTA---TTA--AAAGGGTAGC-TAC-----TTCAGACACTGTGTCTCTGTGGATCTGACG-ACAG-CTCAGGAGGCCAGCACATGCAGAGCCGGCGTCTCATCCCAAGCCGTTGCTGATCATCGGTGAAGGCGGAGTTCAGGTGCATCA-TTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTG-AGCAGTGAGGTCTGATACCACTTCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870279 294 - 880730 CAA---G-------TGA---AATAAAAACTAGCACCTCCGT-AACTTA---TAAGCATG--CGCCCTTTTCTATCTGTAGTTAGAAAGGTACAGGTAGTA---TTA--AAAGGGTAGCTTAC-----TTCAGACACTGTGTCTCTGTGGATCTGACG-ACAG-CTCAGGAGGCCAGCACACGCAGAGCCGGCGTCTCATCCCAAGCCGTTGCTGATCATCGGCGAAGGCGGAGTTCAGGTGCATCGTTTCCTGACGCCACAGGTAGTGCTTGTCTCACTCCGTAGCCCTGCACTTTGTCGCAGTGACGTCTGCTACCACTTCTCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790417 293 + 123690457 AAA---G-------TGA---AATAAAAACTAGCACTGCCAT-AACTTA---TAAACATG--CGCCCTTTTATATCTGTAGTTAGAAAGGTACAGATAGTA---CTA--AAAGGGTAGCTTAC-----TTCAGACACTCTGTCTCTGTGGATCTGACC-ACAG-CCCAGGAGGCCAGCACACGCAGAGCTGGCGTCTTATCCCAAGCCATTGCTGATCATGGGTGGAGGCGGAGTTCAGGTCCGTCG-TTCTTGACGCCACAGGTTGTGCTTGTCTCATTCCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 213888 291 + 180051392 CAA---G-------TGA---AATAAAAACTAGGACTGCTGT-AACTTA---TAAACATG--CCCGCTTTTATATCTGTAGTTAGAAAGGTACGGAGAGTA---TTA--AAAAGGTAGCTTAC-----TTCAGACACTCTGTCTC--TGGATCTGACC-ACAG-CTCGGGAGGCCAGCACACGCAGAGCTGGCGTCTTACCCCAAGTCACTGCTGACCATGGGCGAAGGCAGAGTTCAGGTCCATCG-CTCCTGACGCCACAGGTTGTGATTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276338 290 - 181584905 CAA---G-------TGA---AATAAAAGCTAGGACTGCCGT-AACTTA---TAAACATG--CCCCCTTTTATATCTGTAGTTAGAAA-ATACAGAGAGTA---CTA--AAAGGGTAGCTTAC-----TTCAGCCACTCTGTCTC--TGGATCTGACC-ACAG-CTCGGGAGGCCAGCACATGCAGAGCTGGAGTCTTACCCCAAGTCGCTGCTGATCATGGACGAAGGCGGAGTTCAGGTCCATCG-TTCCTGATGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGGGGACTGATACCACTTCTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37407 291 - 100774 CAA---G-------TGA---AATAAAAACTAGGACTGCTGT-AACTTA---TAAACATG--CCCGCTTTTATATCTGTAGTTAGAAAGGTACGGAGAGTA---TTA--AAAAGGTAGCTTAC-----TTCAGACACTCTGTCTC--TGGATCTGACC-ACAG-CTCGGGAGGCCAGCACATGCAGAGCTGGCGTCTTACCCCAAGTCGCTGCTGACCATGGGCGAAGGCGGAGTTCAGGTCCATCG-CTCCTGACGCCACAGGTTGTGATTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611117 291 - 91010382 CAA---G-------TGA---AATAAAAACTAGGACTGCCGT-AACTTA---TAAACATG--CCCCCTTTTATATCTGTAGTTAGAAAATTACAGAGAGTA---CTA--AAAGGGTAGCTTAC-----TTCAGCCACTCTGTCTC--TGGATCTGACC-ACAG-CTCGGGAGGCCAGCACATGCAGAGCTGGAGTCTTACCCCAAGTCGCTGCTGATCCTGGGCGAAGGCGGAGTTCAGGTCCATCG-CTCCTGACGCCACAGGGTGTGCTTGTCTCACTCCACAGCCCTGCACTTTGTAGCAGTGAGGACTGACACCACTTCTCT i chlSab2.chr4 C 0 I 323 s manLeu1.NW_012101728v1 14563 291 - 74206 CAA---G-------TGA---AATAAAAACTAGGACTGCCAT-AACTTA---TAAACATG--CCCGCTTTTATATCTGTAGTTAGAAAGGTACGGAGAGTA---TTA--AAAAGGTAGCTTAC-----TTCAGACACTCTGTCTC--TGGATCTGACC-ACAG-CTCGGGAGGGCAGCACACGCAGAGCTGGAGTCTTACCCCAAGTCGCTGCTGACCATGGGCGAAGGCGGAGTTCAGGTCCATCG-CTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGGGGACTGATACCACTTCTCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893069 291 + 1687011 CAA---G-------TGA---AATAAAAACTAGGACTGCCGT-AACTTA---TAAACATG--CCTGCTTTTATATCTGTAGTTAGAAAGGTATGGAGAGTA---TTA--AAAAGGTAGCTTAC-----TTCAGACACACTGTCTC--TGGATCTGACC-ACAG-CTCGGGAGGCCAGCACACGCAGAGCTGGCGTCTTACCCCAAGTCGCTGCTGATCATGGGCGAAGGCGGAGTTCAGGTCCATCG-TTCCTGACGCCACAGGTTGTGCTTGTCTCACTTCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154641 297 - 204313951 CAA---G-------CAA---AGTAAAAACGAGCACTGTCGT-AACTTA---CAAACATGTGCCCCCTTTTGTATCTGTGGTTAAAAAGGTACAGGTAGTA---TTA--AAAGGGTAGCTTACAT---TTCACACACTCAGTCTCTGTGGATTTGACC-acag-ctcaggaggctggcacgtgcagaggtggcgtcttgtcccaggtcgttgctgatcattggcaaaggcagagttcaggtccatcc-ttcctgacgccacaggtagtgtttgtctcactccatagccctgcacttTGCAGCAGTGAGGACTGATACCACTTCTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116696 295 - 16417988 CAA---G-------TGA---AATAAAAATGAGCAGTGTCAT-AACTTA---TAAACATGTACCCCCTTTTGTATCTGTGGTTTAAAAGGTACAGGTTGTA---TTA--AAAGGGTAGCTTACGT---TTCACACACTCAGTCTC--TGGATTTGACC-acag-ctcaggaggctgccacatgcagaggtggcgtcttgtcccaggtcattgctgatcattgccaaaggcagagttcaggtccgtct-ctcctgaagccacagatagtgcttgtctcactccatagccctgcacttTGTAGCAGTAAGGACTGGTACCACTTCTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 217622 291 + 306014 CAA---G-------TGA---AATAAAAACAAGTGCTGTCAT-GACTTA---TAAACATGTGCCCCCTTTTGTGTCTGTGGTTAAAAAGGTACAGGTCGTA---TTG--AAAGGGTAGCTTACAT---TTCACACACTCAGTCTC--TGGATTTGACC-acag-ctcaggaggctggcatatgcagaggtggcatcttgtcccaggtcgttgctgatcattggcaaaggcagagttcaggtccgtct-ttcctgacgccgcaggtagtgcttgt----ctccatagccctgcactTTGTAGCAGTGAGGACTGATACCACTTCTCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 78971 296 + 211231 CAA---G-------TGA---AACAAAAGCGAGCACTGTCGT-AACTTA---CAAACATGCACCTCCTTGCGCATCTGTGGTTAGAAAGGTACGGG-AGTG---TTA--AAAGGGCAGCTTACAT---TTCACACACTCAGTCTCTGTGGATCTGACT-GCGG-CTCAGGAGGCCGGCACGTGCACAGGTGGCGTCTCGTCCCAAGTCGTCGCTGATCGCTGGCAAAGGCCGAGTTCAGGTCCATCT-TTCCTGACGCCACGGGTCGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTAGCGGTGAGGACCGATGCCACTTCTCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46443 290 + 2165740 GAAATGA-------TGA---TACAGAAACTAGCACAGTTTT-ATTGTACTGTTAACATA--CTCCTTTATATGTTTGTAGTTAGAAAAATGCAAAGAAT----------AAAGGCAGGTTACAT---TTCACATACT--GTCT---TGTATATGACC-ATAG-CTCAGGA-GCCAGCACATGCAGAAATGGCTCCTCATCCTGAGTCCTTGCTGGTCAGCTGCAAAGGCAGGGCTCAGATCTGTCT-TTCCTGACACCACAGGCAATGCTTGTCCCACTTGGTAATCCTGTACTTTGTAGTGGTGAGGACCAATGCCACTTCTCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091702 227 - 120421639 GTA---G-------TGATGGTGCAGAGACCAGCACATCCTT-GCCTCA---C-----TG-----------------GTAAAGAGAAAGGTTTGGGTAATCATTTTA--CA----TATTTTACATATCTTCACACTCCTAGTCAT----------ACC-ATAG-CACAAGT-----CTAAATGTGAAGACAGTTCCTGGTCCTTAG----TGCTGTCCAGTTGCATAAGCAGGGCTCAAAGG-ATCT-TCTCCGACACCAAATGTAGCCTTTGG-------------------------------GAGGGTCAAAAGCTCATCT-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30176799 267 - 42124431 TTA---ACTCTTACTGT---CCTACTAGTTATATTAGCCCTCAGTATA---ACAAGCTGCACTCCCCTTTATATCTGCAGTTAG-------CAGATAATA---TAACGAAATGGACAGTTATGTT--TTCAAACACCTTCTCTC--TTGCTCTGACT-GCAA-GTCC--AGGCTA--AAAGGCAGAGGTAGGGCCCTGTGCCCA-TTTTTGCTg--------caaaggcaggagtcaaaaccacct-ggtctgacccccaatctagtgcttgtctcac-----------------tgtaATGGTGAAGCCTGAAATAAAATCC-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 552234 280 + 913073 AAA---G-------TAT---AGCAAGTGTTAGG-----CCT-ACCCTA-------------CCCCCTTCCATGTCTACGGTTATGAAGATGCAAATGATG-----A--AAGTGGCAGGTTGCATC--TTCAGATATATTCTCTGAGATGATTTGATCAACAGCCCCaggaagctgaagcgctgggagatggtgccttgtctccagttattgccagtcatttgcaaaagcaagattcaaatctgtat-tttctgataccaTA---TTGGCTCATTTCTCTATATGGTCCTCCATTTTGTAGCAGTGAGGACTGAGATTAAATTTCA i dasNov3.JH577625 I 92 C 0 e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=257282.000000 s hg38.chr3_KI270779v1_alt 45903 27 + 205312 CAGAGCAGTGTAGAAATTTTGAGCTTC s panTro5.chr3 200033138 27 + 202621043 CAGAGCAGTGTAGAAATTTTGAGCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15665 27 + 190779 CAGAGCAGTGTAGAAATTTTGAGCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870573 27 - 880730 CAGAGCAGTGTACAAAGTTTGAGCTTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790710 27 + 123690457 CAGAGCAATGTAGAAATTTTGAGCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214179 27 + 180051392 CAGAGCAATGTAGAAATTTTGAGCTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276628 27 - 181584905 CAGAGCAATGTAGAAATTTTGAGCTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37698 27 - 100774 AAGAGCAATGTAGAAATTTTGAGCTTC i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 14854 27 - 74206 CAGAGCTATGTAGAAATTTTGAGCTTC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893360 27 + 1687011 CAGAGCAATGTAGAAATTTTGAGCTTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154938 27 - 204313951 CCCAGCAATATAGAAAGTTTGAGCTTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 116991 27 - 16417988 CAGAGCAGTATAGGAATTTTGAGCTTC i saiBol1.JH378155 C 0 I 906 s cebCap1.NW_016108150v1 217913 27 + 306014 CAGAGCAGTATAGAAATTTTGAGCTTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79267 27 + 211231 CAGAGCAGTATAGAAATTTTGAGCTTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46733 26 + 2165740 TAGAGCAAAGCAGAAATTCAAGGTTT- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091929 23 - 120421639 -AGAGCAAAGTGGAGACTCAGATT--- i mm10.chr13 C 0 C 0 s canFam3.chr34 30177066 27 - 42124431 CAGGGCAAAGCAGAAAATTCAAAGTTC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 552514 27 + 913073 CAGAGCAAAGCAGAAAATTTGAGCTTC i dasNov3.JH577625 C 0 C 0 e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=264893.000000 s hg38.chr3_KI270779v1_alt 45930 35 + 205312 TCTTTCTTTGAAAATGC---AGAAAAGAACATTTTGTG-- s panTro5.chr3 200033165 35 + 202621043 TCTTTCTTTGAAAATGC---AGAAAAGAACATTTTGTG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15692 35 + 190779 TCTTTCTTTGAAAATGC---AGAAAAGAACATTTTGTG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870600 35 - 880730 TCTTGCTTTCAAAATGC---AGAAAAGAACATTTTGTG-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790737 35 + 123690457 TCTTTCTTTGAAAATGC---AGAAAAGAACATTTTGTA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214206 36 + 180051392 TTTTTCTCTGCAAATGTA--AAAAAAGAACATTTTGTA-- i rheMac8.chr6 C 0 I 319 s macFas5.chr6 180276655 35 - 181584905 TCTTTCTTTGAAAATGC---AAAAAAGAACATTTTGTA-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37725 36 - 100774 TTTTTCTCTGAAAATGCA--AAAAAAGAACATTTTGTA-- i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 14881 36 - 74206 TTTTTCTCTGAAAATGCA--AAAAAAGAACATTTTGTA-- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893387 35 + 1687011 TCTTTCTTTGAAAATGC---AAAAAAGAACATTTTGTA-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 154965 35 - 204313951 TCTTTCTTTGAAAATGC---AAAAAAGAACATTTTATA-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 217940 35 + 306014 TCTTTCTTTGAAAATGC---AAAAAAGAACATTTTATA-- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79294 35 + 211231 TCTTTCTTTGAAAATGC---AAAAAAGAACATTTTATA-- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46759 28 + 2165740 TCTTTCTTTGAAAATGA---GAA-------GTCTCATA-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46091952 33 - 120421639 CCCTGCTTTGAGAAT-----GAGAAAAATTGTTTTAAA-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30177093 35 - 42124431 CCTTTTTTTGGAAATGA---GAAAAAGCAAGTTTTATA-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 552541 40 + 913073 CTTCTCTCTGAAAATGAAGGAAAAAAAAAAAGGTTATAAA i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=134937.000000 s hg38.chr3_KI270779v1_alt 45965 17 + 205312 --------------------AGAATACCCTATACTTG- s panTro5.chr3 200033200 17 + 202621043 --------------------AGAATACCCTATACTTG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15727 17 + 190779 --------------------AGAATACCCTATACTTG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870635 17 - 880730 --------------------AGAATACCCTATACTTG- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790772 15 + 123690457 --------------------AGAATACCCTATACT--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214561 17 + 180051392 --------------------agaaTACCCTATACTTT- i rheMac8.chr6 I 319 C 0 s macFas5.chr6 180276690 17 - 181584905 --------------------AGAATACCCTATACTTT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 37761 17 - 100774 --------------------AGAATACCCTATACTTg- i macNem1.NW_012013899v1 C 0 I 621 s manLeu1.NW_012101728v1 14917 17 - 74206 --------------------AGAATACCCTATACTTT- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893422 17 + 1687011 --------------------AGAATACCCTGTACTTG- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155000 17 - 204313951 --------------------AGAATATCCCATACTTT- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 217975 17 + 306014 --------------------AGAATATCCTCTACCTT- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79329 17 + 211231 --------------------AGAATATCCTATCCTGT- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46787 17 + 2165740 --------------------AGAATACCTTATACTTT- i otoGar3.GL873745 C 0 I 1 s mm10.chr13 46091985 17 - 120421639 --------------------AGAATAGATTATACTTT- i mm10.chr13 C 0 C 0 s canFam3.chr34 30177128 17 - 42124431 --------------------AGAATATCTTATAATTT- i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 552581 38 + 913073 AGAATACCCTAAAAAAAAAAAAAATACCCTGTACTCTT i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=40639.000000 s hg38.chr3_KI270779v1_alt 45982 5 + 205312 ACATC s panTro5.chr3 200033217 5 + 202621043 ACATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15744 5 + 190779 ACATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870652 5 - 880730 ACATC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790787 2 + 123690457 ---TC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214578 5 + 180051392 ACATC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276707 5 - 181584905 ACATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38399 5 - 100774 ACATC i macNem1.NW_012013899v1 I 621 C 0 s manLeu1.NW_012101728v1 14934 5 - 74206 ACATC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893439 5 + 1687011 ACATC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155017 5 - 204313951 ACATC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 217992 5 + 306014 ACATC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79346 5 + 211231 ACATC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 46805 5 + 2165740 ACATC i otoGar3.GL873745 I 1 I 323 s mm10.chr13 46092002 2 - 120421639 -TA-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30177146 5 - 42124431 ATATC i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 552619 5 + 913073 ATATC i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=36909.000000 s hg38.chr3_KI270779v1_alt 45987 4 + 205312 TGAG s panTro5.chr3 200033222 4 + 202621043 TGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15749 4 + 190779 TGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870657 4 - 880730 TGAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790789 4 + 123690457 TGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214583 4 + 180051392 TGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276712 4 - 181584905 TGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38404 4 - 100774 TGAG i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 14939 4 - 74206 TGAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893444 4 + 1687011 TGAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155022 4 - 204313951 TGAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 217997 4 + 306014 TGAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79351 4 + 211231 TGAG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46092004 4 - 120421639 TAGG i mm10.chr13 C 0 I 1 s canFam3.chr34 30177151 4 - 42124431 TGAA i canFam3.chr34 C 0 I 52 s dasNov3.JH577625 552624 4 + 913073 TGAA i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 46810 323 + 2165740 I e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=908726.000000 s hg38.chr3_KI270779v1_alt 45991 134 + 205312 --------------------AAA----CCGCT--------------------------------CACACATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcggactcaaaaggctgcacg-cctgtggtcctgttgataggacattctggacaaggcaca----------tctagggaagaaaagggattggtggttgcca s panTro5.chr3 200033226 134 + 202621043 --------------------AAA----CCGCT--------------------------------CACACATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcggactcagaaggctgcacg-cctgtgatcctgttgatacgacattctggaaaaggcaca----------tctagggaagaaaagggattgctggttgcca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15753 134 + 190779 --------------------AAA----CCGCT--------------------------------CACACATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcggactcagaaggctgcacg-cctgtgatcctgttgatacgacattctggaaaaggcaca----------tctagggaagaaaagggattgctggttgcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870661 133 - 880730 --------------------AGA----CCGCT--------------------------------CACACATGCGGCa-----------tctc---a--agcag--------------a--atgctg-----tg-gagtcacactca-aaggctgcaca-cctgtggtcctgttgatatgacattctggaaaaggcaca----------tctagggaagacaagggattgctggttgcca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790793 134 + 123690457 --------------------AAA----CTGCT--------------------------------CACACATGCAGCA-----------TCTC---A--TGCAG--------------G--ATGCTG-----Tg-gagtcagactcaaaaggctgcaca-cctgtggttctgttgatacgacattctggaaaaggcaca----------tctagggaagaaaagggattggtggttgcca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214587 134 + 180051392 --------------------AAA----CCGCT--------------------------------CACGCATGCAGCa-----------tctc---a--tgcag--------------a--atgctg-----tg-gagtcagactcaaaaggctgcaca-cctgtggctctcttaatacaacattctggaaaaggcaca----------tctagggaagaaaagggattggtggttgcca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276716 134 - 181584905 --------------------AAA----CCGCT--------------------------------CACACATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcagactcaaaagactgcaca-cctgtgactctcttgatacaacattctggaaaaggcaca----------tctagggaagaaaagggattggtggttgcca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38408 134 - 100774 --------------------AAA----CCGCT--------------------------------CACGCATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcagactcaaaaggctgcaca-cctgtggctctcttaatacaacattctggaaaaggcaca----------tctagggaagaaaagggattggtggttgcca i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 14943 134 - 74206 --------------------AAA----CCGCT--------------------------------CACGCATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcagactcaaaaggctgcaca-cctgtggctgtcttgatacgacattctggaaaaggcaca----------tctagggaagaaaagggattggtggttgcca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893448 134 + 1687011 --------------------AAA----CCGGT--------------------------------CACGCATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcagactcaaaaggctgcaca-cctgtggttctcttgatacgacattctggaaaaggcaca----------tctagggaagaaaagggattggtggttgcca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155026 133 - 204313951 --------------------AAA----CCGCT--------------------------------CATGCATGCAGCA------------CTC---A--CGCAG--------------A--ATGTTG-----Tg-gagtcagactcaaaacgctgcaca-cctgaggctctgttgatacagcattctggaaaaggcaca----------tccagggaagaagaggggtcaggggttgcca i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218001 131 + 306014 --------------------AAA----CCGCT--------------------------------CATGCATGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----TG-GAGTCAGACTCAGG--GCTGCACA-CCTGTGGTTCTGTTGATACAACATTCTGGAAAAGGCACA----------TCTGGGGAAGAAGA-GGGTCGGGGGTTACCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79355 134 + 211231 --------------------AAA----CCGCT--------------------------------CGTGCGTGCAGCA-----------TCTC---A--CGCAG--------------A--ATGCTG-----Tg-gagtcagactcgagaggctgcaca-cctgtggctctgtcgatacaacgttctggaaaaggcgca----------tctagggaagaagaggggctgggggttgccg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 47133 109 + 2165740 --------------------AAA----CTGCT--------------------------------CCCACACACAGAG-----------TCTA---A--CGT--------------------------------------------------CCCCACA-CACGCAAATCTCTTTATATGATATGCTGGAAAAGGCAAA------AAACTGCAGAGAAGAAAAGTGAGGAGTGG-TGCCA i otoGar3.GL873745 I 323 C 0 s mm10.chr13 46092009 141 - 120421639 --------------------AAAGGTTCTACA--------------------------------AATACATTAAGAA-----------TTTTTAAA--TTCAGCAATGAAAGGACTAA--ATGTT------TA-GAGTAagactcaaaagactgcaca---tgtgttttta----------attctggaaattgcaag---------ctgtaaggcagaaacaga--tcatggttgcta i mm10.chr13 I 1 C 0 s canFam3.chr34 30177207 146 - 42124431 --------------------aaa----ttcct--------------------------------tgttcgtgcaacagcacaaatggatctc---a--gacat--------------attaagttg-----tattaatcaggctcaaaaggtttcata-tatctga--ctatttatataacattatggaagagacaaa----------actgaggaataagctggctcagtggttgcca i canFam3.chr34 I 52 I 149 s dasNov3.JH577625 552628 215 + 913073 GGATCAATGAACATTTTTAAAAA----TTGTTTTAAAactcagcagtgaaaagggccaaattaccatacatgcagcaccatggatgaatttc---aagtgcat--------------t--gtgctgatgaaag-aagccagactcaaaaggctgcacaatatatgacttgatttatatggcactctagaaagagctgagctgtagaactataaagaagaaaagagttcaatggttgcca i dasNov3.JH577625 C 0 C 0 e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=451921.000000 s hg38.chr3_KI270779v1_alt 46125 103 + 205312 gag------gctgTTTCCTG-ATTGTGCTGAGGCTTACAGACACAGCTCTGTGTGTGTCAAAGTTTGAAAAA-CCTACATTAAAAATGATG-------------AGT----TTATTTTACTGTATCT---T s panTro5.chr3 200033360 103 + 202621043 gag------gctgTTTCCTG-ATTGTGCTGAGACTTACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAA-CCTACATTAAAAATGATG-------------AGT----TTATTTTACTGTATCT---T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15887 103 + 190779 gag------gctgTTTCCTG-ATTGTGCTGAGACTTACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAA-CCTACATTAAAAATGATG-------------AGT----TTATTTTACTGTATCT---T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870794 103 - 880730 gag------gctgTTTCCTG-ATTGTGCTGAGACTTACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAA-CCTACATTAAAAATGATG-------------AGt----ttattttactgtatct---t i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790927 64 + 123690457 gaa------gctgTTTCCTG-ATTGTGCTGAGACTTAGAGACACAGCTCTGTGTGTGTCAAAATTTGAAAA------------------------------------------------------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214721 89 + 180051392 gag------gctgTTTCCTG----------A----TACGGACACAGCTCTCTGTGTACTAAAATTTGAAAAA--CTACACTAAAAATGGTG-------------AGT----TTATTTTACTGTATCT---T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276850 100 - 181584905 gag------gctgTTTCCTG-ATTGTGCTAA----TACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAACCCTATACTAAAAATGATG-------------AGt----ttattttactctatct---t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38542 89 - 100774 ggg------gctgTTTCCTG----------A----TACGGACACAGCTCTCTGTGTACTAAAATTTGAAAAA--CTACACTAAAAATGGTG-------------AGT----TTATTTTACTGTATCT---T i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 15077 98 - 74206 gag------gctgTTTCCTG-ATTGTGCTAA----TATAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAA--CTACACTAAAAATGGTG-------------AGT----TTATTTTACTGTATCT---T i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893582 100 + 1687011 gag------gctgTTTCCTG-ATTGTGCTAA----CACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAACCCTATACTAAAAATGATG-------------AGT----TTATTTTGCTGTATCT---T i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155159 110 - 204313951 gag------gctgTTTCCTG-ATTGTGCTCATAGTTA-ATACACAGCTCTGTGTGTGTCAGCATTTGAAAAATACTACACTAAAAATGGCG-------------AGTTTTTTTTTTTTACTGTATCTTAAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218132 110 + 306014 GAG------GCTATTTCCTG-ATTGTGCTGATACTTA-ATACACAGCTCTGTGCGTGTCAACATTTAAAAAATGCTACCCTAAAAATGGCG-------------AGGTTTTTTTTTTTACTGTATCTTAAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79489 105 + 211231 gag------gctgTTTCCT--ATTGTGCTGACGCTTA-AGACGCAGCTCTGTGTGTGTCAACATTTGAAAAATACTACACTAAAAATGGCG-------------AGG----TTTTTTTACTGTATCTTAAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 47242 106 + 2165740 CAGTTATATGCAATTACATT--CTGTGTTGGGCCTTA---ACACAGCTCTGTGCATATGAAAACTTTAAAAAACCTACACTGGACATTGTG-------------AAT----GTATTTTGTTATATCT---T i otoGar3.GL873745 C 0 I 273 s mm10.chr13 46092150 104 - 120421639 g--------gctggg--cta-gtgggggTTTTACTTA--AACATGACTCTATTTG--CCAAAACCTGAAAAGCTCTACTAAAAAAAAAATGTAAACAAAAAGACAAC----AAATTTCACTGT-------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 552843 91 + 913073 gga------gctCTGTCTCGTGTAGTGCCTG----------CCCAGCTCTGCATTGGTCCACACGTGCAGAACACTACTCTAAGAGGGGTG-------------GAT--------TTTACTGTGTTC---T i dasNov3.JH577625 C 0 I 36 e canFam3.chr34 30177353 149 - 42124431 I e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=49398.000000 s hg38.chr3_KI270779v1_alt 46228 7 + 205312 TACGCTT s panTro5.chr3 200033463 7 + 202621043 TATGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15990 7 + 190779 TATGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870897 7 - 880730 tatgctt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790991 4 + 123690457 ---GCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214810 7 + 180051392 TGTGCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276950 7 - 181584905 tatgctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38631 7 - 100774 TGTGCTT i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012101728v1 15175 7 - 74206 TGTGCTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893682 7 + 1687011 TAGGCTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155269 7 - 204313951 TATGCTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218242 7 + 306014 TATGCTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79594 7 + 211231 TATGCTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 47621 7 + 2165740 TATGCTT i otoGar3.GL873745 I 273 C 0 s mm10.chr13 46092254 3 - 120421639 ----CTT i mm10.chr13 C 0 C 0 e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e saiBol1.JH378155 117018 906 - 16417988 I e chlSab2.chr4 89611408 323 - 91010382 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=465156.000000 s hg38.chr3_KI270779v1_alt 46235 60 + 205312 TAATTTTTAAAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCCCTACTTCTCCCCC---------AA s panTro5.chr3 200033470 60 + 202621043 TAATTTTTAAAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCCCTACTTCTCCCCC---------AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 15997 60 + 190779 TAATTTTTAAAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCCCTACTTCTCCCCC---------AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870904 60 - 880730 taatttttaAAAATGAAAAGGAAAGAAA-AAATGCTCGTAGCATCACTACTTCTCCCCC---------AC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120790995 60 + 123690457 TAATTTTTAAAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCCCTACTTCTCCCCC---------AC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214817 60 + 180051392 TAATTTTTTAAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCGCCACTTCCCCCCC---------AC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180276957 60 - 181584905 taatttttaAAAATGGAAAGGAAAGAAA-AAATGCTTGTAGCATCACTACTTCTCCCCC---------AC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38638 60 - 100774 TAATTTTTTTAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCACCACTTCTCCCCC---------AC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611731 60 - 91010382 TAATTTTTAAAAATGGAAAGGAAAGAAA-AAATGCTTGTAGCATCACTACTTCTccccc---------cc i chlSab2.chr4 I 323 C 0 s manLeu1.NW_012101728v1 15182 60 - 74206 TAATTTTTAAAAATGAAAAGGAAAGAAA-AAATGCTTGTAGCATCACCACTTCTCCCCC---------AC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893689 59 + 1687011 TAATTTTTAAAAATGAAAAGGAAAGAAA-AAATACTTGTAGCATCACCACTTCTCCCCC---------A- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155276 60 - 204313951 TAATTTTTAAAAATGGAAAAGAAAGAAA-AAGGGTTTGTAGCATCACTACTTCTCCCCC---------AC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218249 60 + 306014 TAATTTTTAAAAATGGAAAGGAAAGAAA-AGGTGTTTGTAGCATCACTACTCCTCCCCA---------AC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79601 60 + 211231 TAATTTTTTAAAATGGAAAGGAAAGAAA-AAGTGTTTGTAGCATCGCTACTTCTTCCCT---------AC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 47628 63 + 2165740 TAATTTTTAAAAAAGAAAAGAGAGGAAAGAAATGTTTCTA------CCACTCCTTCCCCCAAAGTATGA- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46092257 41 - 120421639 TGA-ATTTAAAAATG------------A-AAAGATTTGTAATAT------TTTTCCCCC---------AA i mm10.chr13 C 0 I 539 e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=-6229.000000 s hg38.chr3_KI270779v1_alt 46295 7 + 205312 CCCCCGA s panTro5.chr3 200033530 7 + 202621043 CCCCCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16057 7 + 190779 CCCCCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870964 6 - 880730 CCCCCA- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791055 5 + 123690457 GCCCC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214877 2 + 180051392 TC----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277017 2 - 181584905 CC----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38698 2 - 100774 TC----- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611791 6 - 91010382 ccccca- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15242 7 - 74206 TCCCCGA i manLeu1.NW_012101728v1 C 0 I 26 e otoGar3.GL873745 47691 0 + 2165740 C e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e aotNan1.NW_018494784v1 79661 0 + 211231 C e cebCap1.NW_016108150v1 218309 0 + 306014 C e calJac3.chr2 155336 0 - 204313951 C e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 893748 0 + 1687011 C e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=-13680.000000 s hg38.chr3_KI270779v1_alt 46302 16 + 205312 CCCCCCC---A--AAAAT----------------------------------------------ATA s panTro5.chr3 200033537 18 + 202621043 CCCCCCC---AGAAAAAA----------------------------------------------AAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16064 18 + 190779 CCCCCCC---AGAAAAAA----------------------------------------------AAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 870970 58 - 880730 -----CC---AAAAAAAatatatattatacatatatata-atatatatatatatatatatatgtata i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791060 52 + 123690457 -CCCCCC---AAAAAATA-----------Catatatatatatatatatatatatatatatatatata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214879 20 + 180051392 --CCCCA---AAAAAAGA------------------------------------------ATACATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277019 14 - 181584905 --CCCCC---CAAAAA------------------------------------------------ATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38700 20 - 100774 --CCCCA---AAAAAAGA------------------------------------------ATACATA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611797 16 - 91010382 ccccccc---AAAAAA------------------------------------------------ATA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 893748 16 + 1687011 CTCCCCC---AAAAAA------------------------------------------------ATA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155336 19 - 204313951 TCCCTTC--AAAAAACAA----------------------------------------------ATA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218309 21 + 306014 TCCCTCCAAAAAAAAAAA----------------------------------------------ATA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79661 18 + 211231 TCCCTCC---AAAAACAA----------------------------------------------CCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 47691 16 + 2165740 --CTCTT---TTAAACAT----------------------------------------------TTA i otoGar3.GL873745 C 0 I 319 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e saiBol1.JH378155 117018 906 - 16417988 I e manLeu1.NW_012101728v1 15249 26 - 74206 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=14654.000000 s hg38.chr3_KI270779v1_alt 46318 10 + 205312 TATATGTGTA-- s panTro5.chr3 200033555 10 + 202621043 TATATATGTA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16082 10 + 190779 TATATATGTA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871028 10 - 880730 tatgtatata-- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791112 10 + 123690457 tatatgtata-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214899 10 + 180051392 CATATATATA-- i rheMac8.chr6 C 0 I 1 s macFas5.chr6 180277033 4 - 181584905 CATA-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38720 10 - 100774 CATATATATA-- i macNem1.NW_012013899v1 C 0 I 1 s chlSab2.chr4 89611813 5 - 91010382 CATAt------- i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 893764 10 + 1687011 CATATGTATG-- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155355 12 - 204313951 CATAGATATGTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218330 12 + 306014 CACATATATGTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 79679 12 + 211231 CATAGATATGTA i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 47707 319 + 2165740 I e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e saiBol1.JH378155 117018 906 - 16417988 I e manLeu1.NW_012101728v1 15249 26 - 74206 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=657826.000000 s hg38.chr3_KI270779v1_alt 46328 87 + 205312 tttttagacatagtctccctctgtcacccaggcttgagtgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaa s panTro5.chr3 200033565 87 + 202621043 tttttagacatagtcttcctctgtcacccaggcttgagtgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16092 87 + 190779 tttttagacatagtctccctctgtcacccaggcttgagtgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871038 87 - 880730 tttttagacatagtcttcctctgtcgtcaaggctggagtgcagtggtacgatcaggtgcacgccaccacacctggctaatttttaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791122 87 + 123690457 tttttagacatagtctccctctgtcgcccaggctggagcgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214910 86 + 180051392 tttttagagatagtctccctctgtcgcccaggctggagtgcagtggtacgatTaggtgcacgccaccacacatggctaa-ttttaaa i rheMac8.chr6 I 1 C 0 s macFas5.chr6 180277037 87 - 181584905 tttttagagatagtctccctctgtcgcccaggctggagtgcagtggtacggtcaggtgcacgccaccacacatggctaatttttaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38731 86 - 100774 tttttagagatagtctccctctgtcgcccaggctggagtgcagtggtacgatTaggtgcacgccaccacacatggctaa-ttttaaa i macNem1.NW_012013899v1 I 1 C 0 s chlSab2.chr4 89611818 86 - 91010382 -ttttagagatagtctccctctgtcgcccaggctggagtgcagtggtacgatcaggtgcacgccaccacacatggctaatttttaaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15275 87 - 74206 tttttagaaatagtctccctctgtcgcccaggctggagtgcagtggtacgatTaggtgcacgccaccatacctggctaattttaaaa i manLeu1.NW_012101728v1 I 26 C 0 s colAng1.NW_012116910v1 893774 87 + 1687011 tttttagagctagtctccctctgtcgcccaggctggagtgcagtggtatggtcaggtgcacaccaccacacatggctaattttttaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155367 87 - 204313951 TTTTTAGAGATAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGTATGATcaggtgcacgccaccacacctggctaatttttaaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 218342 87 + 306014 tttttagagatagtctccctctgccgcccaggctggagtgcagtggtgagatcaggtacatgccaccacacctggctaatttttaaa i cebCap1.NW_016108150v1 C 0 I 839 s aotNan1.NW_018494784v1 79691 87 + 211231 tttttaaagttagtctccctctgtcgcccaggctggagtgcagtggtaggatcaggtgcacgccaccacacctggctaatttttaaa i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 47707 319 + 2165740 I e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=410824.000000 s hg38.chr3_KI270779v1_alt 46415 68 + 205312 aatgtattctagggacagggtctccctgtgttgcccagggtggtcttgaactcctgacctcaagtgat s panTro5.chr3 200033652 67 + 202621043 aatgtattctagg-acagggtctccctgtgttgcccaggatggtcttgaactcctgacctcaagtgat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16179 67 + 190779 aatgtattctagg-acagggtctccctgtgttgcccaggatggtcttgaactcctgacctcaagtgat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871125 67 - 880730 aatgt-ttctagggacagggtctccctttgttgcccaggatggtcttgaactcctgagctcaagtgat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791209 68 + 123690457 aatgttttctagggacagggtctccctgtgtttcccaggatggtcttgaactcctgacctcaagtgat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 214996 68 + 180051392 aatattttgtagggacagggtctccctttgttgcccaagatggtcttgaactcctggcctcaagtgat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277124 68 - 181584905 aatgtttcatagggacagggtctccctgtgttgcctaggatggttttgaactcctggcgtcaagtgat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38817 68 - 100774 aatattttgtagggacagggtctccctttgttgcccaagatggtcttgaactcctggcctcaagtgat i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611904 68 - 91010382 aatattttgtagggacagagtctccctgtgttgcccaagatggtcttgaactcctggcctcaagtgat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15362 68 - 74206 aatattttgtagggacagggtctccctttgttgcccaggatggtcttgaactcctggcctcaagtgat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893861 68 + 1687011 aatgtttcatagggacagggtctccctctgttgcccaggatggtcttgaactcctggcctcaagtgat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155454 68 - 204313951 cattttttgtagggacagggtctccctgtgttaccccggatggtcttgaactcttggcctcaggtgat i calJac3.chr2 C 0 C 0 s aotNan1.NW_018494784v1 79778 68 + 211231 cattttttgtagggacggggtctccctatgttaccccggatggtcttgaactcctggcctcaggtgat i aotNan1.NW_018494784v1 C 0 I 423 e otoGar3.GL873745 47707 319 + 2165740 I e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=200101.000000 s hg38.chr3_KI270779v1_alt 46483 36 + 205312 cctcctgtctcagcctcccaaagt-----ggttacatgc----at s panTro5.chr3 200033719 36 + 202621043 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16246 36 + 190779 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871192 40 - 880730 cctcctgtctcagcctcccaaagt-----gGTTACATGCATCTAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791277 36 + 123690457 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215064 36 + 180051392 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277192 36 - 181584905 cctcctgtctcagcctcccaaagt-----gGTTATATGC----AT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38885 36 - 100774 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89611972 36 - 91010382 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15430 36 - 74206 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893929 36 + 1687011 cctcctgtctcagcctcccaaagt-----gGTTACATGC----AT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155522 41 - 204313951 gcacctgcatcagcttcccagagtgctgggattacatgt----at i calJac3.chr2 C 0 I 377 e otoGar3.GL873745 47707 319 + 2165740 I e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=132529.000000 s hg38.chr3_KI270779v1_alt 46519 32 + 205312 CTATCCATGTGTTAAAATCGGTAGAACTGAgg s panTro5.chr3 200033755 32 + 202621043 CTATCCATGTGTTAAAATCGGTAGAACTGAgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16282 32 + 190779 CTATCCATGTGTTAAAATCGGTAGAACTGAgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871232 32 - 880730 CTATCCGTGTGTTAAAATTGGTAGAACTGAgg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791313 32 + 123690457 CTATACATGCATTGAAATTGGTAGAACTGAgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215100 32 + 180051392 CTATACATGTGTTAAAGTTGGTAGAATTGAgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277228 32 - 181584905 CTATACATGTGTTAAAGTTGGTAGAACTGAgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38921 32 - 100774 CTATACATGTGTTAAAGTTGGTAGAACTGAgg i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612008 32 - 91010382 TTATACATGTGTTAAAGTTGGTAGAACTGAgg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15466 32 - 74206 TTATACATGTGTTAAAGTTGGCAGAACTGAgg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893965 26 + 1687011 CTATACATGT------GTTGGTAGAACTGAgg i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 47707 319 + 2165740 I e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e calJac3.chr2 155563 377 - 204313951 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=1184417.000000 s hg38.chr3_KI270779v1_alt 46551 233 + 205312 ccgggtgcagt-ggctcacacctataatcccaccactttgggaggccaaggcaggccgattgcttgagctcaggagttcgaga----------------------------ccagcttgggcaaggtggtgaaaccccgtctctaccag-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacacttggg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgttggagcctagaaggcggaggttgctgtgagccga s panTro5.chr3 200033787 233 + 202621043 ctgggtgcagt-ggctcacacctataatcccaccactttgggaggccaaggcaggccgattgcttgagctcaggagttcgaga----------------------------ccagcttgggcaaggtggtgaaaccccgtctctaccaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacacttggg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagcctagaaggcggaggttgcagtgagccga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16314 233 + 190779 ctgggtgcagt-ggctcacacctataatcccaccactttgggaggccaaggcaggccgattgcttgagctcaggagttcgaga----------------------------ccagcttgggcaaggtggtgaaaccccgtctctaccaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacacttggg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagcctagaaggcggaggttgcagtgagccga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871264 234 - 880730 ttgggtacagtgggctcacacctgtaatcccaccactttgggaggccaaggcaggccgattgcttgagctcaggagttcgaga----------------------------ccagcttgggcaaggtggtgaaaccccgtctctaccaa-------aaatacaaagatt--------------------------agctgg-----gcatggtggct-----------------------------cacacttggg--------------------------------------------tagtcccagctgcttgggaggctgagatgggaggattgctggagcctagaaggcggaggttgcagtgagccga i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791345 233 + 123690457 ctgggtgcagt-ggctcgcgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagctgaggagttcaaga----------------------------ccagcttgggcaaggtggtgaaaccccgtctctaccaa-------aaatacaaaaatt--------------------------agctgg-----gtatggtggct-----------------------------cacacttggg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagccga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215132 233 + 180051392 ctgggtgcagt-ggcttatgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagctcaggagttcaaga----------------------------ccagcttgggcaaggtggtaaagccccgtctctacaaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacaccagtg--------------------------------------------tagccctagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagctga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277260 233 - 181584905 ctgggcgcagt-ggctcatgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagctcaggagttcaaga----------------------------ccagcttgggcaaggtggtaaaaccccgtctctgcaaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacaccagtg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagccttgaaggcggaggttgcagtgagccga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 38953 233 - 100774 ctgggtgcagt-ggcttatgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagctcaggagttcaaga----------------------------ccagcttgggcaaggtggtaaagccccgtctctacaaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacaccagtg--------------------------------------------tagccctagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagctga i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612040 233 - 91010382 ctgggtgcagt-ggctcatgcctataatcccaccactttgggaggctgaggcaggcagattgcttgagctcaggagttcaaga----------------------------ccagcttgggcaaggtggtaaagccccgtctctgcaaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacaccagtg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagctga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15498 233 - 74206 ctgggcgcagt-ggctcatgcctataatcccaccactttgggaggctgaggcaggcagattgcttgagctcaggagttcaaga----------------------------ccagcttggacaaggtggtaaagccccgtctctacaaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacaccagtg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagctga i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 893991 233 + 1687011 ctgggtgcagt-ggctcatgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagcccaggagttcaaga----------------------------ccagcttgggcaaggtggtaaaaccctgtttctacaaa-------aaatacaaaaatt--------------------------agctgg-----gcatggtggct-----------------------------cacaccattg--------------------------------------------tagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagccga i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 48026 371 + 2165740 ctgggtgttgt-ggcaggtgcctatagtcccagctacttgggaggctgaggcaggataattgcttaagctcaagagtttgaggttgctctgagctgtgatgctatggcactctacccagggcgacatagtaagtctctgtctcaaaaaaaataaataaataaaAAGATTTAGCGCCCATTCcttagtgattagggcactggcccatgcactgtggctgatgggtttgtacccgccccggcctgctaaacaacagtgacaactacaacaaaaaaatagccaggtgttgtgatgggtgcctatagtcccagctacttggaaggctgaggcaagagaatt-cttaagcccaagagtttgaggttgctgtgagctgt i otoGar3.GL873745 I 319 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e calJac3.chr2 155563 377 - 204313951 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=370404.000000 s hg38.chr3_KI270779v1_alt 46784 79 + 205312 gatcacaccactgcactccagcctgggcaacagagggaggagacactgtctc-aaaa-aaaaaaaa----gaaaaaagaaaCTGT s panTro5.chr3 200034020 81 + 202621043 ggtcacaccactgcactccagcctgggcaacagagggaggagacactgtctc-aaaa-aaaaaaaa--aagaaaaaagaaaCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16547 77 + 190779 ggtcacaccactgcactccagcctgggcaacagagggaggagacactgtact-aaaa-aaaaaa------gaaaaaataaaCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871498 83 - 880730 gatcacaccactgcactccagcctgggcaacagagggaggagacgctgtctc-aaaa-aaaaaaaaaaaagaaaaaataaaCTGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791578 80 + 123690457 gatcacaccactccactccagcctgggcaacagagggaagagacattgtctc-aaaa-aaaagaaa---agaaaaaataaaTTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215365 74 + 180051392 gatcacaccactgca-tccagcctgagcaacagagggaggagacactgtctc-aaag-aaaa--------gaaaaaagaaaTTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277493 76 - 181584905 gatcataccactgcactccagcctgagcaacagagggaggagacgctgtctc-aaaataaaa--------gaaaaaagaaaTTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39186 74 - 100774 gatcacaccactgca-tccagcctgagcaacagagggaggagacactgtctc-aaag-aaaa--------gaaaaaagaaaTTGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612273 75 - 91010382 gatcacaccgctgca-tccagcctgagcaacagagggaggagacactgtctcaaaaa-aaaa--------gaaaaaagaaaTTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15731 74 - 74206 gatcataccactgca-tccagcctgagcaacagaggaaggagacactgtctc-aaag-aaaa--------gaaaaaagaaaTTGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894224 75 + 1687011 gatcacaccactgcactccagcctgagcaatagagggaggagacactgtctc-aaaa-aaaa--------gaaaaaataaaTTGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158006 75 + 204313951 gatcacaccattgcactccaggctgggtgacaggtagaggagacactatctc-aaaa-aaat--------aaacaaagaaaTTAT i calJac3.chr2 n 377 C 0 s otoGar3.GL873745 48397 65 + 2165740 ---gacaccatggcactctaccgagggtgac---ttcatgagactctgtctc-aaaa-aaac------------aaaaaaaTTGT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 552934 36 + 913073 I e canFam3.chr34 30177353 149 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=248038.000000 s hg38.chr3_KI270779v1_alt 46863 39 + 205312 AGAACTGTCCACCGAAAGAAAAAAGTCAATTTTAATGGA s panTro5.chr3 200034101 39 + 202621043 AGAACTGTCCATCGAAAGAAAAAAGTCAATTTTAATGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16624 39 + 190779 AGAACTGTCCATCGAAAGAAAAAAGTCAATTTTAATGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871581 39 - 880730 AGAACTGTCCACCGAAAGAAAAAAGTCAATTTTAATGAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791658 39 + 123690457 AGAACTGTCCACCAGAAGAAAAAAGTCAATTTTAATGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215439 39 + 180051392 ACAACGGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277569 39 - 181584905 AGAGCGGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39260 39 - 100774 ACAACGGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612348 39 - 91010382 AGAACTGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15805 39 - 74206 AGAATGGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894299 39 + 1687011 AGAACTGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 204158081 39 + 204313951 AGAACTGTGCACCAAAAGAAAAAAGTCAATTTTACTGAA i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48462 37 + 2165740 AGAA--GTGCACCAAATGAAAAAAGTCAGTTTTACTGAA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 552970 35 + 913073 AAAACTGTACACCAAAAGAAAAAGG----GTTTTCTGAG i dasNov3.JH577625 I 36 C 0 e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177353 149 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=88817.000000 s hg38.chr3_KI270779v1_alt 46902 12 + 205312 TGATCAATTTTT s panTro5.chr3 200034140 12 + 202621043 TGATCCGTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16663 12 + 190779 TGATCAATTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871620 12 - 880730 TGATCAATTTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791697 12 + 123690457 TGATCCATTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215478 12 + 180051392 TGATCAATTTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277608 12 - 181584905 TGATCAATTTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39299 12 - 100774 TGATCAATTTTT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612387 12 - 91010382 TGATCAATTTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15844 12 - 74206 TGATCAATTTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894338 12 + 1687011 TGATCAAttttt i colAng1.NW_012116910v1 C 0 I 331 s calJac3.chr2 204158120 12 + 204313951 TGATCAATTTTT i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48499 12 + 2165740 TGGTCAATTTTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30177502 12 - 42124431 TAATCACTTTTC i canFam3.chr34 I 149 I 1 s dasNov3.JH577625 553005 12 + 913073 TCATAGCTTTTA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=401167.000000 s hg38.chr3_KI270779v1_alt 46914 85 + 205312 AAAGCGTTATAAACAAAAGGAAAAGAGACACC-AGCAAGCCTAGAAGCATTTGAGCAGA--------------------CC-GTCAAGAGACCCACAGCCTGGTCCC s panTro5.chr3 200034152 85 + 202621043 AAAGCGTTATAAACAAAAGGAAAAGAGACACC-AGCAAGCCTGGAAGTAGTTGAGCAGA--------------------TC-CTCAAGAGACCCACAGCCAGGTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16675 85 + 190779 AAAGCGTTATAAACAAAAGGAAAAGAGACACC-AGCAAGCCTGGAAGCATTTGAGCAGA--------------------TC-CTCAAGAGACCCACAGCCTGGTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871632 85 - 880730 AAAGCATTATAAACAAAAGGAAAAGAGACACC-AGCAAGCCTAGAAGCGTTTGAGCAGA--------------------CC-CTCAAGAGACCCACAGCCTGGTCCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120791709 85 + 123690457 AAAGCATTATAAACAAAAGGAAAAGAAACACC-AGCGAGCCTAGAAACATTTGAGCAGA--------------------CC-CTCAAGAGACCCACAGCCTGGGCCC i nomLeu3.chr11 C 0 I 226 s rheMac8.chr6 215490 85 + 180051392 AAAGCATTATAATCAAAAGGAAAAGAAACACC-AGCAATCCTAGAAGCATTTGAGCAGG--------------------CC-CTCAAGAGACCCACACCCTGGTCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277620 85 - 181584905 AAAGCATTATAATCAAAAGGAAAAGAAACACC-AGCAATCCTAGAAGCATTTGAGCAGG--------------------CC-CTCAAGAGACCCACACCCTGGTCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39311 85 - 100774 AAAGCATTATAATCAAAAGGAAAAGAAACACC-AGCAATCCTAGAAGCATTTGAGCAGG--------------------CC-TTCAAGAGACCCACACCCTGGTCCC i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612399 81 - 91010382 AAAGCGTTATAATCAAAAGGAAAAGAAACACC-AGCAATCCTAGAAGCATTTGA----G--------------------CC-CTCAAGAGCCTCACACCCTGGTCCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15856 85 - 74206 AAAGCATTATAATAAAAAGGAAAAGAAACACC-AGCAATCCCAGAAGCATTTGAGCAGG--------------------CC-CTCAAGAGACCCACACCCTGGTCCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204158132 81 + 204313951 AAAGCA--ATAAACAAAAGGAAAAGAAACAGA-AGCAAGCCTAGAAGCATGTGAGCAGA--------------------CC-CTCAGGAGGCCCCTCGC--GGTCCT i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48511 74 + 2165740 AGAACATCATAAACAAAAGGAAAAG---CAAT-AGCCTTCCTAGAAGCGTTCAGG-----------------------------TGAGTGGGCAGCACCCTGGTTCC i otoGar3.GL873745 C 0 I 2 s canFam3.chr34 30177515 86 - 42124431 AATACATTACAAACAAAAGCAGAAGAAACCAC-AGCTGGCCTGGAAGAGCTGGGGTGGT--------------------TTGCATGATAGACCAGTGCCCTCACTCC i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 553017 103 + 913073 AAAAAATT---GATAAAAGTAAAAGAAGCAGTAAGCATGCCTAGAAGTGCTTGAGCAGACACACAGGGAGCAGTGGGTCCC-CTTTGGAGAGCAGAGCCCAGTGCCC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 894350 331 + 1687011 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=24810.000000 s hg38.chr3_KI270779v1_alt 46999 7 + 205312 GAGGAGA--- s panTro5.chr3 200034237 7 + 202621043 GTGGAGA--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16760 7 + 190779 GTGGAGA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871717 7 - 880730 GTGGAGA--- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792020 7 + 123690457 GGGGAGA--- i nomLeu3.chr11 I 226 C 0 s rheMac8.chr6 215575 7 + 180051392 CTGGAGA--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277705 7 - 181584905 CTGGAGA--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39396 7 - 100774 CTGGGGA--- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612480 7 - 91010382 CTGGGGA--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15941 7 - 74206 CTGGGGA--- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204158213 7 + 204313951 TTGGAGA--- i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48587 5 + 2165740 --GAAGA--- i otoGar3.GL873745 I 2 I 2 s canFam3.chr34 30177601 7 - 42124431 TTGTAGA--- i canFam3.chr34 C 0 I 4 s dasNov3.JH577625 553120 7 + 913073 ---GAGAGGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 894350 331 + 1687011 I e cerAty1.NW_012004452v1 197138 66 + 218577 I a score=434405.000000 s hg38.chr3_KI270779v1_alt 47006 80 + 205312 GGCGGTAGGCGGG----ACAGGGCCTGTTTGACTCCTGCATTTCATACCTCCTATCTCCTGCATGTGTTACCTATTGAAGAA--AA s panTro5.chr3 200034244 80 + 202621043 GGCGGTAGGCAGG----GCAGGGCCTGTTTGACTCCTGCATTTCATACCTCCTATCTCCTGCATGTGTTACCTATTGAAGAA--AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16767 80 + 190779 GGCGGTAGGCGGG----ACAGGGCCTGTTTGACTCCTGCATTTCATACCTCCTATCTCCTGCATGTGTTACCTATTGAAGAA--AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871724 79 - 880730 GGCGGTAGGCAGG----GCAGGGCCTGTTGGACTCCTGCATTTCATACCTCCTATCTCCTGCATGTGTTACCTATTGAAG-A--AA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792027 80 + 123690457 GGCAGTGGGCGGG----GCAGGGCCTGTTTGATTCCTGCATTTCATACCTCCTACCTCCTGCATGTGTTACCTATTGAAGAA--AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215582 80 + 180051392 GGCGGTGGGCGGG----GCGGGGCTTGTTTGACTCCTGCATTTCATACCTCCTACCTTCTGCATGTATTACCTGTTGAAGAAAA-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277712 78 - 181584905 GGCGGTGGGTGGG----GCGGGGTTTGTTTGACTCCTGCATTTCATACCTCCTACCTTCTGCATGTATTATCTGTTGAAGAA---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39403 80 - 100774 GGTGGTGGGCGGG----GCGGGGCCTGTTTGACTCCTGCATTTCATACCTCCTACCTTCTGCATGTATTATCTGTTGAAGAAAA-- i macNem1.NW_012013899v1 C 0 I 23 s cerAty1.NW_012004452v1 197204 78 + 218577 GGCGGTGGGCGGG----GCGGGGCCTGTTTGACTCCTGCATTTCATACCTCCTACCTTCTGCATGTATTACCTGTTGAAGAA---- i cerAty1.NW_012004452v1 I 66 C 0 s chlSab2.chr4 89612487 78 - 91010382 GGTGGTGGGTGGG----GCGGGGCCTGTGTGACTCCTGCATTTCATACCTCCTACCTTCTGCATGTGTTACCTGTTGAAGAA---- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 15948 78 - 74206 GGCGGTGGGCGGG----GCGGGGCCTGTTTGACTCCTGCATTTCATACCTCCTACCTTCTGCATGTATTACCTGTTGAAGAA---- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204158220 78 + 204313951 GGCAGTGGGCAG------CATGACCTGTGTGTCCCCTGCATTTCATACCTCCTACCTCCTGCATGTACTAACTATTGAAGAA--AA i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48594 78 + 2165740 ----GTGGGCTGGGAGTGAGAGACCTATGTGTCTCCTGCATTTCTTACCTCCTATATCCCATGTGTATTACCTGTTGAAAAA---- i otoGar3.GL873745 I 2 I 5 s canFam3.chr34 30177612 81 - 42124431 TACTGTGAGCAAC-CCTACTTTGCCTGC--AAATCCTTGTTTCCTCATTTCATACCTTGTGCCCATATTACCTATGGAAGAA--AA i canFam3.chr34 I 4 I 3 s dasNov3.JH577625 553127 51 + 913073 ----------AGT----GAGAGGCCTA------------ATTGCAGGCTTC-TGCTTCCTG------TTACCTGCTGAAGAA--AA i dasNov3.JH577625 C 0 I 55 e mm10.chr13 46092298 539 - 120421639 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 894350 331 + 1687011 I a score=63851.000000 s hg38.chr3_KI270779v1_alt 47086 30 + 205312 AATACATATAATTTTATAAAAAAAAAAAAC- s panTro5.chr3 200034324 30 + 202621043 AATATATATAATTTTATAAAAAAAAAAAAC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16847 30 + 190779 AATATATATAATTTTATAAAAAAAAAAAAC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871803 29 - 880730 TATATAGATAATGTTAT-AAAAGAAAAAAC- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792107 27 + 123690457 TATATATATAATGTTAT---AAAAAAAAAC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215662 23 + 180051392 --TATATATAATGTTATTAAAAAAA------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277790 25 - 181584905 AATATATATAATGTTATTAAAAAAA------ i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 197282 25 + 218577 AATATATATAATGTTATTTTAAAAA------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89612565 25 - 91010382 AATATATATAATGTTATAAAAAGAA------ i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16026 25 - 74206 AATATATATAATGTTATTTTAAAAA------ i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204158298 23 + 204313951 --TATGCATAAAGTTATACAAAAAA------ i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48677 28 + 2165740 TTTTTAAAAATTGTCATCACAAAACAAC--- i otoGar3.GL873745 I 5 C 0 s canFam3.chr34 30177696 31 - 42124431 ATTTCAAACCATGTCATTAAAAAAACAACAT i canFam3.chr34 I 3 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e macNem1.NW_012013899v1 39483 23 - 100774 I e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 894350 331 + 1687011 I a score=144433.000000 s hg38.chr3_KI270779v1_alt 47116 25 + 205312 CTTTAAAACTTTTTTCAAGACATCT s panTro5.chr3 200034354 24 + 202621043 -TTTAAAACTTTTTTCGAGACATCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16877 24 + 190779 -TTTAAAACTTTTTTCGAGACATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871832 24 - 880730 -TTTAAAATTTTTTTCAAGACATCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792134 24 + 123690457 -TTTACAATTTTTTTCAAGACATCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215685 25 + 180051392 CTTTAAAATTTTTTTGAAGACATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277815 25 - 181584905 CTTTAAAACTTTTTTCAAGACATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39506 25 - 100774 CTTTAAAATTTTTTTGAAGACATTT i macNem1.NW_012013899v1 I 23 C 0 s cerAty1.NW_012004452v1 197307 25 + 218577 CTTTAAAACTTTTTTGAAGACATCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89612590 25 - 91010382 CTTTAAAACTTTTTTCAAGACATCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16051 25 - 74206 CTTTAAAACTTTTTTGAAGACATCT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204158321 24 + 204313951 -CTTAAAACTTTTTTCAAGACATCT i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48705 24 + 2165740 -CTTGAAAAAATCCTTACAATCTCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30177727 23 - 42124431 CTTTAAAA--GTTTTCAAAACATTT i canFam3.chr34 C 0 I 230 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 894350 331 + 1687011 I a score=278307.000000 s hg38.chr3_KI270779v1_alt 47141 52 + 205312 TGGAAACACAAGAGTTGCAAATCTTggccgtgcgcagcagctcacacatgtg s panTro5.chr3 200034378 52 + 202621043 TGGAAACACAAGAGTTGCAAATCTTggccatgcgcagcagctcacacatgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16901 52 + 190779 TGGAAACATAAGAGTTGCAAATCTTggccgtgtgcagcagctcacacatgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871856 52 - 880730 TGGAAACACAAGAGTTGCAAATCTTggccgtgcgcagtggctcacacatgtg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792158 52 + 123690457 TGGAAACACAAGAGTTGCAAATCTTggccgtgcgtggtggctcacacatgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215710 52 + 180051392 TAGAAACACAAGAGTTGCAAATCTTggctgtgcacagtggctcacacatgtg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277840 52 - 181584905 TAGAAACACAAGAGTTGCAAATCTCggctgtgcacagtggctcacacttgtg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39531 52 - 100774 TAGAAACACAAGAGTTGCAAATCTTggctgtgcacagtggctcacacatgtg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 197332 52 + 218577 TAGAAACACAAGAGTTGCAAATCTTggctgtgcacagtggctcacacatgtg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89612615 52 - 91010382 TGGAAACACAAGAGTTGCAAATCTCggctgtgcgcagtggctcacacttgtg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16076 52 - 74206 TAGAAACACAAGGGTTACAAATCTTggctgtgcacagtggctcacacatgtg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 204158345 52 + 204313951 TAGAAACACAAGAGTTGCACATCTTGCccaagtgcagtggcttatacatgta i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 48729 43 + 2165740 TTTTAGAGTGAGAGGTA---------GATAGGCACAATGACTCAcacctaca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I e colAng1.NW_012116910v1 894350 331 + 1687011 I a score=268987.000000 s hg38.chr3_KI270779v1_alt 47193 38 + 205312 atcccagcactttgggaggctgaggcaggtggctcacc s panTro5.chr3 200034430 38 + 202621043 atcccagcactttgggaggctgaggcaggtggctcacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16953 38 + 190779 atcccagcactttgggaggctgaggcaggtggctcacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871908 38 - 880730 atcccggcactttgggaggctgaggcaggtggctcacc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792210 38 + 123690457 atcccagcactttgtgaggccgaggcaggtggctcacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215762 38 + 180051392 atcccagcactttgggaggccgagacaggtggctcacc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277892 38 - 181584905 atcccagcactttggaaggccgaggcaggtggatcacc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39583 38 - 100774 atcccagcactttgggaggccgagacaggtggctcacc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 197384 38 + 218577 atcccagcaccttggaaagccgagacaggtggctcacc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89612667 38 - 91010382 atcccagcactttgggaggccgaggcaggtggctcacc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16128 38 - 74206 atcccagcaccttggaaagccgagacaggtgactcacc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894681 38 + 1687011 atcccaccactttgggaggccgaggcaggcagattgct i colAng1.NW_012116910v1 I 331 C 0 s calJac3.chr2 204158397 38 + 204313951 atcccagcactctgggaagctgatgcaggtgcatcacc i calJac3.chr2 C 0 n 0 s otoGar3.GL873745 48772 38 + 2165740 atcccagcactctgggaggctgaggtaggaggatctct i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I e saiBol1.JH378155 117018 906 - 16417988 I a score=30550.000000 s hg38.chr3_KI270779v1_alt 47231 5 + 205312 tgagg s panTro5.chr3 200034468 5 + 202621043 tgagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16991 5 + 190779 tgagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871946 5 - 880730 tgagg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792248 5 + 123690457 tgagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215800 5 + 180051392 tgagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277930 5 - 181584905 tgagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39621 5 - 100774 tgagg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 197422 5 + 218577 tgagg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89612705 5 - 91010382 tgagg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16166 5 - 74206 tgagg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894719 5 + 1687011 tgagc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155940 3 - 204313951 tga-- i calJac3.chr2 I 377 C 0 s saiBol1.JH378155 117924 3 - 16417988 tga-- i saiBol1.JH378155 I 906 C 0 s otoGar3.GL873745 48810 5 + 2165740 tgagg i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I e cebCap1.NW_016108150v1 218429 839 + 306014 I a score=30433.000000 s hg38.chr3_KI270779v1_alt 47236 3 + 205312 tca s panTro5.chr3 200034473 3 + 202621043 tca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16996 3 + 190779 tca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871951 3 - 880730 tca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792253 3 + 123690457 tca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215805 3 + 180051392 tca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277935 3 - 181584905 tca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39626 3 - 100774 tca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 197427 3 + 218577 tca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89612710 3 - 91010382 tca i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16171 3 - 74206 tca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894724 3 + 1687011 cca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 155943 3 - 204313951 tca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 117927 3 - 16417988 tca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219268 3 + 306014 tca i cebCap1.NW_016108150v1 I 839 C 0 s otoGar3.GL873745 48815 3 + 2165740 cca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e aotNan1.NW_018494784v1 79846 423 + 211231 I a score=1251021.000000 s hg38.chr3_KI270779v1_alt 47239 138 + 205312 ggagttcgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggttgcaaactcc--tgtagtcccatctactccagagtctgaggcaggaggattgcttgaacca-ggag s panTro5.chr3 200034476 138 + 202621043 ggagttcgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggttgcatactcc--tgtagtcccatctactccagagtctgaggcaggaggattgcttgaacca-ggag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 16999 138 + 190779 ggagttcgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggttgcatactcc--tgtagtcccatctactccagagtctgaggcaggaggattgcttgaacca-ggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 871954 138 - 880730 ggagttcgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggttgcatactcc--tgtagtcccatctactccagagtctgaggcaggaggattgcttgaacca-ggag i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792256 138 + 123690457 ggagttcgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggtggcgtactcc--tgtagtcccagctactccggagtctgaggcaggaggattgcctgaacca-ggag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 215808 138 + 180051392 ggagtttgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagctaggtatggtggcatactcc--tgtagtcccagctactctggaggctgaggcataaggattgcttgaacga-ggag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180277938 138 - 181584905 ggagtttgagaccagcctggtcaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggtggcatactcc--tgtagtcccagctactccggagactgaggcagaaggattgcttgaacca-ggag i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39629 138 - 100774 ggagtttgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggtggcatactcc--tgtagtcccagctactctggaggctgaggcataaggattgcttgaacca-ggag i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 197430 138 + 218577 ggagtttgagaccagcctggccaacatggtgaaaccccacctctactgaaaatacaaaaattagccaggtatggtggcatactcc--tgtagtcccagctactccggagactgaggcaggaggattgcttgaacca-ggag i cerAty1.NW_012004452v1 C 0 I 1564 s chlSab2.chr4 89612713 138 - 91010382 cgagtttgagaccagcctggtcaacatggtgaaaccccatctctactgaaaatacaaaaattagccaggtatggtggcacactcc--tctagtcccagctactccagaggctgaggcataaggattgcttgaacca-ggag i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16174 138 - 74206 ggagtttgagaccagcctggccaacatggtgaaaccccacctctactgaaaatacaaaaattagccaggtatggtggcatactcc--tgtagtcccagctactccggagactgaggcaggaggattgcttgaacca-ggag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894727 140 + 1687011 ggagttcaagaccagcttgggcgaggtggtaaaaccctgtctctacaaaaaatacaaaaattagctgggcatggtggctcacaccattgtagtcccagctacttgggaggctgaggtgggaggattgctggagcct-ggaa i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 155946 138 - 204313951 ggagtttgagaccagcctggccaacatggggaagccccatctctactaaaaacagaaaaattagccagacatggtgaaacactct--agtagtcccagctacttgggaggctgaggcaggaggatcacttgaacta-ggag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 117930 129 - 16417988 ggagtttgagaccagcctggccaacatggtgaagccccgtctctactaaaaacagaaaaattagccaggcgtggtgaaata-----------ttccaactacttgggaggctgaggcaggaggatcacttgaacta-ggag i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219271 138 + 306014 ggagtttgagaccaggctggccaacatggtgaagccccgtctctactaaaaacagaaaaattagccaggcatggtgaaacacttc--tgtagtcccagctacttgggaggttgaggcaggaggatcacttgaacta-ggag i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80269 138 + 211231 ggagtttgagaccagcctggccaacatggtgaagccccatctctactaaaaacagaaaaattagccaggcatggtgaaacactcc--tgtagtcccagcttcttgggaggctgaggcaggaggatcatttgaacta-ggag i aotNan1.NW_018494784v1 I 423 C 0 s otoGar3.GL873745 48818 54 + 2165740 ggagttgaaggt---------------------------------------------------------------------------tgcagt------------gaactatgcaacctaagaatcacttgagccctggag i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I a score=557961.000000 s hg38.chr3_KI270779v1_alt 47377 63 + 205312 gtggaggttgcagtgagccgagatgg----tgccactgcactccagcctgggctacagagcaaaatt s panTro5.chr3 200034614 63 + 202621043 gtggaggttgcagtgagccgagatgg----tgccaccgcactccagcctgggctacagagcaaaatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17137 63 + 190779 gtggaggttgcagtgagccgagatgg----tgccaccgcactccagcctgggctacagagcaaaatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872092 63 - 880730 gtggaggttgcagtgagccgagatgg----tgccactgcactccagcctgggctacagagcagaatt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792394 63 + 123690457 gtggaggttgcagtgagccaagatgg----tgtcactgcactccagcctgggctacagagcaaaatt i nomLeu3.chr11 C 0 M 529 s rheMac8.chr6 215946 63 + 180051392 gtggaggttacagtgagccgagatgg----tgtcagtgcactccaacttgggctacagagcaaaatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278076 63 - 181584905 gtggaggttgcagtgagccgagatgg----tgccagtgcactccaacctgggctacagagcaaaatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39767 63 - 100774 gtggaggttacagtgagccgagatgg----tgtcagtgcactccaacttgggctacagagcaaaatt i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612851 63 - 91010382 gtggaggttgcagtgagtcgagatgg----tgccagtgcactctagcctgagctacagagcaaaatt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16312 63 - 74206 gtggaggttgcagtgagccgagatgg----tgccagtgcactccaacctgggctacagagcaaaatt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894868 63 + 1687011 gcggaggttgcagtgagccgagatgg----taccagtgcactccagcctgggctacagagcaaaatt i colAng1.NW_012116910v1 I 1 C 0 s calJac3.chr2 156084 61 - 204313951 gtggaggttgcagggagccgagatgg----tgccgctgcactccagactgggctacaaag--aaatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118059 61 - 16417988 gtggaggttgcagtgaaccgagatgg----tgccactgcactccagactgggctacaaag--aaatt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219409 65 + 306014 gtggaggctgcagtgagccaagatggtgcctgccgctgcactccagactgggctacaaag--aaatg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80407 61 + 211231 gtggaggttgcaatgagccgagatgg----tgcccctgcactccaggctgggctgcaaag--aaatt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 48872 63 + 2165740 ttgaagggtacagtgaactatgatgt----tgctgctgcactccaggctggacaacagagagagacc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I a score=149332.000000 s hg38.chr3_KI270779v1_alt 47440 31 + 205312 ccatctc----aaaaaaaaaaaaa---aaaaaTT-GCAA s panTro5.chr3 200034677 26 + 202621043 ccatctc----aaaaaaaaaaaaa--------TT-GCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17200 27 + 190779 ccatcta----caaaaaaaaaaaa--------TTAGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872155 28 - 880730 ccatctc----aaaaaaaaaaaaa------aaaT-GCAA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 216009 27 + 180051392 ccatctc---aaaaaaaaaaaaaa--------TT-GCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278139 23 - 181584905 ccatctc-------aaaaaaaaaa--------TT-GCAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 39830 27 - 100774 ccatctc---aaaaaaaaaaaaaa--------TT-GCAA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612914 25 - 91010382 ccatctc-----aaaaaaaaaaaa--------TT-GCAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16375 25 - 74206 ccatctc-----aaaaaaaaaaaa--------TT-GCAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894931 30 + 1687011 ccatctcaaaaaaaaaaaaaaaaa--------TT-GCAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156145 24 - 204313951 ccatctc------aaaaaaaaaaG--------TT-GCAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118120 29 - 16417988 ccatctc-aaaaaaaaaaaaaaaG--------TT-GCAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219474 28 + 306014 ccatctc--aaaaaaaaaaaaaaG--------TT-GCAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80468 29 + 211231 ccatctc-aaaaaaaaaaaaaaaG--------TT-GCAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 48935 34 + 2165740 ctagctc----taaaaaatagaaaGGTAATAGCT-GCAG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46092298 539 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=1104840.000000 s hg38.chr3_KI270779v1_alt 47471 151 + 205312 ATCTTGAAGTATAGGTGAGAGCACA--CAACAGTCCAAATCAGCAGGTGACTTGCAAGCACACA----GCAGCCACCTTCCTCCCCCTAATGTG---AAGGACA-GTGGGGCGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG---TCATTTTTTCCCGT-------------------TA s panTro5.chr3 200034703 151 + 202621043 ATCTTGAAGTATAGGTGAGAGCACA--CAACAGTCCAAATCAGCAGGTGGCTTTCAAGCACACA----GCAGCCACCTTCCTCCCCCTAATGCG---AAGGACA-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG---TCTTTTTTTCTCCT-------------------TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17227 151 + 190779 ATCTTGAAGTATAGGTGAGAGCACA--CAACAGTCCAAATCAGCAGGTGGCTTTCAAGCACACA----GCAGCCACCTTCCTCCCCCTAATGCG---AAGGACA-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG---TCTTTTTTTCTCCT-------------------TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872183 151 - 880730 ATCTTGAAGTATAGGTGAGAGCACA--CAACAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----ACAGCCACCTTCCTCCCCCTAATGTG---AAGGACA-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG---TCTTTTTTTCCCCT-------------------TA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 216036 151 + 180051392 ATCTTGAAGTGTAGGTGAGAGCACA--CAAGAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----GCAGCCACCTTCCTTCCCCTTATGCG---AAGGACG-GTGGGGTGGCCGGCCC--CTCAGGACCACCATCTGGAAGGTG---TTTGTTTTTTCCCT-------------------TA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278162 154 - 181584905 ATCTTGAAGTGTAGGTGAGAGCACA--CAAGAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----GCAACCACCTTCCTCCCCCTTATGCG---AAGGACG-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTGGTTTTTTTTTTTCCCCT-------------------TA i macFas5.chr6 C 0 I 26 s macNem1.NW_012013899v1 39857 151 - 100774 ATTTTGAAGTGTAGGTGAGAGCACA--CAAGAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----GCAGCTACCTTCCTTCCCCTTATGCG---AAGGACG-GTGGGGTGGCCGGCCC--CTCAGGACCACCATCTAGAAGGTG---TTTGTTTTTTCCCT-------------------TA i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89612939 170 - 91010382 ATCTTGAATTGTAGGTGAGAGCACA--CAAGAGTCCAAATCAGCAGGTGACTTTCAGGCACACA----GCAGCCACCTTCCTTCCCCTGATGCG---AAGGACG-GTGGGGTGGCCAGCGC--CTTGGGACCACCATCTGGAAGGTG---TCCTTTTTTTCCCCTTACATACACTTATTCCCGTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16400 151 - 74206 ATCTTGAAGTGTAGGTGAGAGCACA--CAAGAGTCCAAATCAGCAAGTGACTTTCAAGCACACA----GCAGCCACCTTCCTTCCTCTGATGCG---AAGGACG-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG---TTTTTTTTTTCCCT-------------------TA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 894961 151 + 1687011 ATATTGAAGTGTAGGTGAGAGCACA--CAAGAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----GCAGCCACCTTCCTTCCCCTGATGCA---AAGGACA-GTGGGGTGGCCAGCTC--CTCGAGACCACCATCTGGAAGATG---TCCTTTTCTTCCCC-------------------TT i colAng1.NW_012116910v1 C 0 I 19 s calJac3.chr2 156169 149 - 204313951 ATCTTGAAGTCTAGGTGAGAGCACACACAAGAATTTGAATCAGCAAGTGACTTTCAAGCACACA----GCGGCCACCTTCCTCCCCT-GATGCA---AAGGATG-GTGGGGTGGCCAGCCC--CTCGGGATTACCATCTGG-AGGTG---TC--TTTTTTCCCT-------------------TA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118149 150 - 16417988 ATCTTGAAGTCTAGGTGAGAGCACACGCAAGAGTTTGAATCAGCAAGTGACTTTCAGGCACACA----GCGGCCACCTTCCTCCCCC-GATGCA---AAGGACA-GTGAGGTGGCCAGCCG--GTCAGGACCACCATCTGG-AGCTG---TC-TTTTTTTCCCT-------------------TA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219502 150 + 306014 ATCTTGAAGTCTAGGTGAGAGCACACACAAGAGTTTGAATCAGCAAGTGACTTTCAAGCACACA----GCGGCCACCTTCCTCCCCC-GATGCG---AAGGATG-GTGAGGTGGCCAGCCC--CTCGGGACCACCATCTGG-AGGTG---TC-TCTTTTTCCCT-------------------TA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80497 151 + 211231 ATCTTGAAGTCTAGGTGAGAGCACACACAAGAGTTTGAATCAGCAAATGACTTTCAAGCACGCA----GCGGCCACCTTCCTCCCCCTGATGCC---AAGGACG-GTGGGGTAGCCAGCCC--CTCGGGACCACCGTGTGG-AGGTG---TC-TTTTTTTCCCT-------------------TA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 48969 149 + 2165740 ATCTTCAGGACTACGTAAGGGCATG--C--GAGTTAGAATCAGCAGACAACAACCAA-TATACA-----CTGTCACCTCCCTTCTCCCTGCACACCTGAGAACT-TTGGGGTGGTCAGCTC--CTCAGCACTGCTATCTGGATGGTA---TC-ATTTTCCTCCT-------------------TA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46092837 153 - 120421639 ATCTTGAGGTTT-TGTAAGAGCACT--TAAGAGTCAAGACCAGCAGGCAGCTTTTCAAGACACATAGGATAGCTACCTGTTTATTCCTTCATCA---GAAAACGTGTGAGGCTAACATCTCAAATTGAGACCACTATCTTAAGGGTA---ACAATTT----CCT-------------------TA i mm10.chr13 I 539 C 0 e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=14707.000000 s hg38.chr3_KI270779v1_alt 47622 8 + 205312 GTGGAGTG s panTro5.chr3 200034854 8 + 202621043 GTGGAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17378 8 + 190779 GTGGAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872334 8 - 880730 GTGGAGTG i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 216187 8 + 180051392 GTGGAGTG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 40008 8 - 100774 GTGGAGTG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89613109 8 - 91010382 ATATACAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16551 8 - 74206 GTGGAGTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895131 8 + 1687011 ATATACAC i colAng1.NW_012116910v1 I 19 C 0 s calJac3.chr2 156318 5 - 204313951 GTGGA--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118299 5 - 16417988 GTGGA--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219652 5 + 306014 GTGGA--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80648 5 + 211231 GTGGA--- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49118 8 + 2165740 GTAGAGTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46092990 8 - 120421639 CTGGAGTA i mm10.chr13 C 0 C 0 e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I e macFas5.chr6 180278316 26 - 181584905 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=13904.000000 s hg38.chr3_KI270779v1_alt 47630 3 + 205312 ACA s panTro5.chr3 200034862 3 + 202621043 ACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17386 3 + 190779 ACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872342 3 - 880730 ACA i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 216195 3 + 180051392 ACG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278342 3 - 181584905 ACA i macFas5.chr6 I 26 C 0 s macNem1.NW_012013899v1 40016 3 - 100774 ACG i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89613117 3 - 91010382 ACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16559 3 - 74206 ACG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895139 3 + 1687011 ACA i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 49126 3 + 2165740 ATA i otoGar3.GL873745 C 0 I 24 s mm10.chr13 46092998 3 - 120421639 ACA i mm10.chr13 C 0 I 23 e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e aotNan1.NW_018494784v1 80653 0 + 211231 C e cebCap1.NW_016108150v1 219657 0 + 306014 C e calJac3.chr2 156323 0 - 204313951 C e saiBol1.JH378155 118304 0 - 16417988 C e cerAty1.NW_012004452v1 197568 1564 + 218577 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=360037.000000 s hg38.chr3_KI270779v1_alt 47633 82 + 205312 TTTATATACACTTAATGTATATAAATCTGTATACATTTAA---ttttttttttttgtaagacagggtctcgctctgttgcccagg s panTro5.chr3 200034865 80 + 202621043 TTTATATACACTTAATGTATATAAATTTGTATACATTTAA---tttttttttt--gtaagacagggtctcactctgttgcccagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17389 79 + 190779 TTTATATACACTTAATGTATATAAATTTGTATACATTTAA---ttttttttt---gtaagacagggtctcactctgttgcccagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872345 82 - 880730 TTTATATACATTTAATATATATAAATTTGTATACATTTAA---ttttttttttttgtaagacagggtctcgctccgttgcccagg i gorGor5.CYUI01015759v1 C 0 C 0 s rheMac8.chr6 216198 78 + 180051392 TTTATATACACTTAATGTATATAAATTTGTATACATTTAA---tttttttttt--ttaaaacagggtctcgctc--ttgcccaga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278345 74 - 181584905 TTTATATACACTTAATATGTATAAATTTGTATACtttttt---tttttttttt--taaagacagcgtctcact------ccgagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40019 77 - 100774 TTTATATACACTTAATGTATATAAATTTGTATACATTTAA---tttttttttt--taaa-acagggtctcgctc--ttgcccaga i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89613120 76 - 91010382 TTTATATACACTTAATATGTATAAATTTGTATACtt-------tttttttttt--taaagacagggtctcactctgttgtgcagg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16562 78 - 74206 TTTATATACACttaatgtatctaaatttgtatacatttaa---tttttttttt--aaaaaacagggtctcgttc--ttgcccaga i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895142 78 + 1687011 TTTATATACACTTAATATGTATAAACTTGTATACtttt-----tttttttttt--ttaagacaaggtctcactctgttgtgcagg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156323 67 - 204313951 ----------------GTATATAAATTTGTATACATTTAAttttttttttttt--taaagacagagtctcactctgttgcccagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118304 67 - 16417988 ----------------GTATATAAATTTGTATACATTTAAttttttttttttt--taaagacagagtctcactctgttgcccagg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219657 65 + 306014 ----------------GTATATAAATTTGTATACATTTAA--ttttttttttt--caaagacagagtctcgctctgttgcccagg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80653 33 + 211231 ----------------GTATATAAATTTGTATACATtt------------------------------------tgttgcccagg i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 49129 24 + 2165740 I e mm10.chr13 46093001 23 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=1742217.000000 s hg38.chr3_KI270779v1_alt 47715 213 + 205312 ctggagtgcagtggcgcgatctcggctcactgcaacctccacctttcgggttaaagcagttctcatg--------------------------------------------------ccagataatttttgtg-tttttagtagaaatgaggttttgccacgttggccaggctgctcttgaactcctgacctcaagtgcttcacctac---ctcagcctcct-aaagtgctgggattacaggcgtgagccactgcacctggccTACAT s panTro5.chr3 200034945 213 + 202621043 ctggagtgccgtggcacgatctcggctcaccgcaacctccacctttcgggttgaagcagttctcatg--------------------------------------------------ccagataatttttgtg-tttttagtagaaatgaggttttgccacgttggccaggctgctcttgaactcctgacctcaagtgcttcacctac---ctcagcctcct-aaagtgctgggattacaggcgtgagccaccgcacccggccTACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17468 213 + 190779 ctggagtgccgtggcacgatctcggctcaccgcaacctccacctttcgggttgaagcagttctcatg--------------------------------------------------ccagataatttttgtg-tttttagtagaaatgaggttttgccacgttggccaggctgctcttgaactcctgacctcaagtgcttcacctac---ctcagcctcct-aaagtgctgggattacaggcgtgagccaccgcacccggccTACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872427 214 - 880730 ctggagtgccgtggcgccatctcggctcactgcaacctccaccttttgggttcaagcagttctcatg--------------------------------------------------ccagataatttttgtgtttttttgtagaaatgaggttttgccacgttggccaggctgctcttgaactcctgacctcaagtgcttcacctac---ctcagcctcct-aaagtgctgggattacaggcgtgagccaccgcacccggccTACAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120792986 212 + 123690457 ctggagtgcagtggcacgatctcggctcactgcatcctccccctttcaggtttaagcagttctcatg--------------------------------------------------ATAATtaatttttgtg-tttttagtagaaatgaggttttaccacgttggccaggctgctcttgaactcctgacctcgagtgctccacctac---ctcagcctcct-acagtgctgggatcacaggcgtgagccaccgcccccggccTACA- i nomLeu3.chr11 M 529 C 0 s rheMac8.chr6 216276 258 + 180051392 ctggagtgcagtggcgcaatcttggctcactgcaacctctacctttcgggttcaagcagttctcatgcctcagcctcccgagtagctgggattataggcgcacaccaccatac----cccgataatttttgtg-tttttagtagaaacgaggttttgccatgttggccaggctgcacttgaactcctaacctcaagtgatccacctat---ctcggcctcct-aaagtgctaggattacaggcgagagccaccgcacccggccTTCA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278419 258 - 181584905 ctggagtgcagtggcgcgatctcagctcactgcaaccttcacctttcaggttcaagcagttctcgtgcctcagcctcccgagtagctgggattataggcgcgtgccaccatac----ccaggtcatttttgtg-tttttagtagaaatgaggttttgccatgttggccaggctgctcttgaactcctgacctcaagtgatccacctat---ctcggcctcct-aaagtgctgggattacaggcgagagctaccgcacctggccTTCA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40096 258 - 100774 ctggagtgcagtggcgcaatctcggctcactgcaacctctacctttcgggttcaagcagttctcatgcctcagcctcccgagtagctgggattataggcgcacaccaccatac----cccgataatttttgtg-tttttagtagaaacgaggttttgccacgttggccaggctgcacttgaactcctgacctcaagtgatccacctat---ctcggcctcct-aaagtgctaggattacaggcgagagccaccgcacccggccTTCA- i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89613196 258 - 91010382 ctggagcgcaatggcgcgatctcagctcactgcaaccttcacctttcaggttcaagcagttctcgtgcctcagcctcccaagtagctgggattataggcgcgtgccaccatac----ccaggtcatttttgtg-tttttagtagaaatgaggttttgccatgttggccaggctgctcttgaactcctgacctcaagtgatccacctat---ctcggcctcct-aaagtgctgggattacaggcgagagctaccgcacctggccTTCA- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16640 258 - 74206 ctggagtgcagtggcacgatctcggctcactgcaacctctacctttcgggttcaagcagttctcatgcctcagcctcccgagtagctgggattctaggcgcatgccaccatac----cccgataatttttgtg-tttttagtagaaacgaggttttgccacgttggccaggctgcacttgaactcctgacctcaagtgatccacctat---ctcggcttcct-aaagtgctaggattacaggcgagagccaccgcacccggccttca- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895220 258 + 1687011 ctggagtgcagtggcgccatctcaactcactgcaactttcacctctcaggttcaagcagttgtcatgcctcagcctcccgagtagctgggattataggcgcgtgccaccatac----ccaggtaatttttgtg-tttttagtagaaatgaggttttgccacgttggccaggctgcacttgaacttctgacctcaagtgatccacctat---ctcggcctcct-aaagtgctgggattacaggtgagagctcccgcacccggccTTCA- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156390 261 - 204313951 ctggagtgcagtggtgtagtctcagctcactgcaacctccaccttccgggttcaagcagttctcatgcctcagtctcccaagtagctgggtttacaggtgcacaccaccatacctgtc----taatttttgta-tttttagtagaaacaaagttttgccatgttggccaggttggtctcaaatgcctgacctcaagtgatccatccaccatctcggcctcct-gaagtgctgggattacaggtgtgacacaccctgcccCGGCTACA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118371 255 - 16417988 ctggagtgcactggtgcagtctcggctcactgcaacctccaccttctgggttcaagcagttctcatgcctcagcctcccaagtagctgggtttacaggtgcataccaccacac----c----taatttttgta-tttttagtagaaacaaggttttgccatgttggccaagttggtctcgaacgcctgacctcaagtgatccacccac---ctcggcctcctaaaagtgctgggattacaggtgtgacccaccctgcccCGGCTACA- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219722 250 + 306014 ctggagtgcagtggtgcagtcttggctcactgcaacctccaccttccaggttcaagcagttctcatgtctcagcctcccaagtaggtgggtttataggcgcataccaccacac----c----taatttttgta-tttttagtagaaacaaggttttgccatgttggacaggttggtctcgaacgcctgacctcaagtgatccac-------ctcggcctcct-aaagtgctgggattacaggtgtgacccaccctgcccCGGCTACA- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80686 254 + 211231 ctggagtgcagtggtgtagtctcggctcactgcaacctccaccttccgggttcaagcagttcttatgccccagcctcccaagtagctgggtttacaggtgcacaccaccacac----c----taatttttgta-tttttagtagaaaccaggttttgccatgttggccaggttggtctcgaactcctgacctcaagtgatccacccac---ctcggcctccc-aaagtgctgggattacgggtgtgaccccccgtgcccCAGCTTCA- i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 49129 24 + 2165740 I e mm10.chr13 46093001 23 - 120421639 I e dasNov3.JH577625 553178 55 + 913073 I e canFam3.chr34 30177750 230 - 42124431 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I a score=352527.000000 s hg38.chr3_KI270779v1_alt 47928 33 + 205312 TTTAATTTTTTAATTTTAGAGATGATTTCTAGT s panTro5.chr3 200035158 33 + 202621043 TTTAATTTTTTAATTTTAGAGATGATTTCTAGt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17681 33 + 190779 TTTAATTTTTTAATTTTAGAGATGATTTCTAGt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872641 33 - 880730 TTTAATTTTTTAATTTTAGAGATGATTTCTAGt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793198 33 + 123690457 TTTAATTTTTTAATTTTAAAGATGATTTCTAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216534 33 + 180051392 TTTAATTTTTTAATTTTAGAGATGATTTCTAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278677 33 - 181584905 TTTAATTTTTTAATTTTAGAGATGATTTCTAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40354 33 - 100774 TTTAATTTTTTAATTTTAGAGATGATTTCTAGT i macNem1.NW_012013899v1 C 0 C 0 s chlSab2.chr4 89613454 33 - 91010382 TTTAATTTTTTAATTTTAGAGATGATTTCTAGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16898 33 - 74206 tttaattttttaatttTAGAGATGACTTCTAGT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895478 33 + 1687011 TTTAATTTTTTAATTTTAGAGATGATTTCTAGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156651 33 - 204313951 TTTAATTTTTTAATTTTAGAGGTGATGTCTAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118626 33 - 16417988 TTTAATTTTTTAATTTTAGAGATGATACCTAGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 219972 33 + 306014 TTTAATTTTTTAATTTTAGGGATGATGTCCAGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80940 33 + 211231 TTTAATTTTTTAATTTTAGAGATGACGTCTCGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49153 33 + 2165740 TTTAAGTTTTTTATCTTGGGGGTGCTTTCTAGT i otoGar3.GL873745 I 24 C 0 s canFam3.chr34 30177980 32 - 42124431 TCTAATTTTTTAA-CTTAGGAATGGATTCTGAT i canFam3.chr34 I 230 C 0 s dasNov3.JH577625 553233 31 + 913073 TTGGGTTTTTCTACATTAGAGGTGGTTGCTG-- i dasNov3.JH577625 I 55 C 0 e mm10.chr13 46093001 23 - 120421639 I e cerAty1.NW_012004452v1 197568 1564 + 218577 I a score=580072.000000 s hg38.chr3_KI270779v1_alt 47961 54 + 205312 TTATTCACTC-TAAGATCACTTAATGGATATCTACTGTGTGCCAACAG-T-TTTGCC s panTro5.chr3 200035191 54 + 202621043 ttattcactc-taagatcacttaatggatatctactgtgtgccagCAG-T-TTTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17714 54 + 190779 ttattcactc-taagatcacttaatggatatctactgtgtgccagCAG-T-TTTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872674 55 - 880730 ttattcactc-taagatcacttaatggatatctactgtgtgccaACAGTT-TTTGCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793231 54 + 123690457 TTATTCACTC-TAAGATTATTTAATGGATATCTACTGTGTGCCAACAG-T-TTTGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216567 54 + 180051392 TTATTCACTC-TAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278710 54 - 181584905 TTATTCACTC-TAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40387 54 - 100774 TTATTCACTC-TAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199132 54 + 218577 TTATTCACTC-TAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i cerAty1.NW_012004452v1 I 1564 C 0 s chlSab2.chr4 89613487 54 - 91010382 TTATTCACTC-TAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16931 54 - 74206 TTATTCACTC-TAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895511 55 + 1687011 TTATTCACTCTTAAGATAAGTTAATGGATATCTACTGTGTGCCAACAA-T-TTTGCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156684 55 - 204313951 TTGTTCACTC-CAAGATCTCATAATGGCTTTCTACTGTGTGTCAACAA-TGTTTGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118659 54 - 16417988 TTGTTCACTC-TAAGATCACTTAATGGATTTCTACTGTGTGTTAACAA-T-TTTGCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 220005 54 + 306014 TTGTTCACTC-CAAGATCACTTAATGGATTTCTACTGTGTGTCAACAA-T-TTTGCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 80973 54 + 211231 TTGTTGACTC-CAAGATCACTTAATGGATTTCTACTGTGTGTCCACAA-T-TTTGCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49186 54 + 2165740 TTGTTCATTC-CAAGATTACTTATTGGAGACCTACTATATAACAGCAT-T-TTTCTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30178012 49 - 42124431 ----TTGTTC-ATAGATTTCATATTGGATACCTACTCTTTGCCAGAAA-T-TTTGT- i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 553264 47 + 913073 ---ttcattc-agagattactta-tgggcacctactgtgtaaca--ag-t-tttgt- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46093001 23 - 120421639 I a score=860156.000000 s hg38.chr3_KI270779v1_alt 48015 84 + 205312 -TTTTATGTCTGTTCTTTAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGTT-GGCAG--TGTGTTAGCTCAGGAG s panTro5.chr3 200035245 84 + 202621043 -TTTTATGTCTGTTCTTTAAAATTGGCCCCAACTCAACAGATGA-CCTCAGATGTAGGGTGGGCT-GGCAC--TGTGTTAGCTCAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17768 84 + 190779 -TTTTATGTCTGTTCTTTAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAC--TGTGTTAGCTCAGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872729 84 - 880730 -TTTTATGTCTGTTCTTTAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTCAGGAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793285 84 + 123690457 -TTTCATGTCTGTTCTTTAAAATTGGCCCCAACTCAACGGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTCAGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216621 83 + 180051392 -TTT-ATGTATGTTCTTTAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTGAGAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278764 83 - 181584905 -TTT-ATGTATGTTCTTTAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTGAGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40441 83 - 100774 -TTT-ATGTATGTTCTTTAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTGAGGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199186 83 + 218577 -TTT-ATGTATGTTCTTTAAAACTGGCCCCAACTCAACAGATGA-CCTCAGATGTAGGGTGGGCT-GGCCG--TGTGTTAGCTGAGGAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613541 83 - 91010382 -TTT-ATGTATGTTCTTTAAAACTGGCCCCAGCTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTGAGGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 16985 83 - 74206 -TTT-ATGTATGTTCTTTAAAACTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCCG--TGTGTTAGCTGAGAAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895566 83 + 1687011 -TTT-ATGTATGTTCTTCAAAATTGGCCCCAACTCAACAGATGG-CCTCAGATGTAGGGTGGGCT-GGCAG--TGTGTTAGCTGAGGAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156739 82 - 204313951 -TTT-CTGTATGTTCTTTAAAATTGGCCCCAGCTCAGTAGATGG-CCTCAGTTGTGGGGT-TGCT-GGCCG--TGTGTTAGCTCAGTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118713 83 - 16417988 -TTT-CTGTGTGTTCTTTAAAATTGGCCCCAGCTCAATAGATGG-CCTCAGTTGTGGGGTAGGCT-GGTAA--TGTGTCAGCTCAGGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 220059 83 + 306014 -TTT-CTGTATGTTCTTTAAAATTGGCCCCAGCTCAGTAGATGG-CCTCAGTTGTGGGGTAGGCT-GGCAA--TGTGTTAGCCCAGGAG i cebCap1.NW_016108150v1 C 0 I 9 s aotNan1.NW_018494784v1 81027 81 + 211231 -TTT-CTGTATGTTCTTTACAATTGGCCCCAGCTCAATAGATGG-CCTCAGTCGTGGGGTAGGCT-GGCAG--TGTG--AGCTCAGGAG i aotNan1.NW_018494784v1 C 0 I 382 s otoGar3.GL873745 49240 86 + 2165740 -CTTTATGTATGATCTTTAAAATTGGTCCCAAATCGGTAGCTGGTTCTTTGGAGAAGGGCGGGCCAGGCTA--TGTGTTAGCTTGGGTT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46093024 79 - 120421639 -TCT-CTGTATATGTCTTAAGACTGACTCTGAGTCAGT-----G-TCTCATTCCTTAGGTTGG-T-GCCAAACAGTGTTGGTTCAGATT i mm10.chr13 I 23 I 3 s canFam3.chr34 30178062 56 - 42124431 -TTT-AAGTTTGCTCTT------TGGCCCCAAGTCAGTATGTGG-TTC----TTTAGGGTTAG---GGCAG--T--------------- i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 553311 81 + 913073 TTCT-GTGTTTATTCTGTAGAATTGGCCCCTGATAAACAATT---CCTCAATTATAGGGCTGCCCAGGCAG----CATTAGCTCAGGTT i dasNov3.JH577625 C 0 C 0 a score=6126.000000 s hg38.chr3_KI270779v1_alt 48099 1 + 205312 A s panTro5.chr3 200035329 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17852 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872813 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793369 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216704 1 + 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278847 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40524 1 - 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199269 1 + 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613624 1 - 91010382 G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17068 1 - 74206 A i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895649 1 + 1687011 A i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 156821 1 - 204313951 A i calJac3.chr2 C 0 I 222 s saiBol1.JH378155 118796 1 - 16417988 C i saiBol1.JH378155 C 0 I 2 s otoGar3.GL873745 49326 1 + 2165740 A i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 553392 1 + 913073 A i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46093103 3 - 120421639 I e canFam3.chr34 30178118 0 - 42124431 C e aotNan1.NW_018494784v1 81108 382 + 211231 I e cebCap1.NW_016108150v1 220142 9 + 306014 I a score=25719.000000 s hg38.chr3_KI270779v1_alt 48100 8 + 205312 CTTACACC s panTro5.chr3 200035330 8 + 202621043 CTTACACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17853 8 + 190779 CTTACACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872814 8 - 880730 CTTACACA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793370 8 + 123690457 CTTACACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216705 8 + 180051392 CTTTCGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278848 8 - 181584905 CTTTCACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40525 8 - 100774 CTTTCACA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199270 8 + 218577 CTTTCGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613625 8 - 91010382 CTTTTGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17069 8 - 74206 CTTTCGCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895650 8 + 1687011 CTTTCGCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157044 6 - 204313951 CCTGCA-- i calJac3.chr2 I 222 C 0 s saiBol1.JH378155 118799 6 - 16417988 CCTGCG-- i saiBol1.JH378155 I 2 C 0 s otoGar3.GL873745 49327 8 + 2165740 CTGCTGCC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46093106 6 - 120421639 TCTATG-- i mm10.chr13 I 3 C 0 s dasNov3.JH577625 553393 8 + 913073 CTTCTGCA i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30178118 0 - 42124431 C e aotNan1.NW_018494784v1 81108 382 + 211231 I e cebCap1.NW_016108150v1 220142 9 + 306014 I a score=493409.000000 s hg38.chr3_KI270779v1_alt 48108 60 + 205312 GTTTCCAGGCTCCTTGAGCGGCTATGCTACATT-TTTGTGTGTAGTACTAAATCCATTTGT s panTro5.chr3 200035338 60 + 202621043 GTTTCCAGGCTCCTTGAGCGGCTATGCTTCATT-TTTGTGTGTCATACTAAATCCATTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17861 60 + 190779 GTTTCCAGGCTCCTTGAGCGGCTATGCTTCATT-TTTGTGTGTCATACTAAATCCATTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872822 60 - 880730 GTTTCCAGGCTCCTTGAGCGGCTATGCTACATT-TTTGTGTGTCGTACTAAATCCATTTGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793378 60 + 123690457 GTTTCCAGGCTCCTTGAGCGGCTGTGCTACATA-TTTGTATGTCATTCTAAATCCATTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216713 60 + 180051392 GTTTCCAAGCTCCTTGAGCGGCTGTGCTATGTA-TTTTTGTATCATTCTAAATCCATTTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278856 60 - 181584905 GTTTCCAAGCTCCTTGAGCGGCCGGGCTACGTA-TTTTTGTGTCATTCTAAATCCATTTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40533 60 - 100774 GTTTCCAAGCTCCTTGAGCGGCCGTGCTACGTA-TTTTTGTGTCATTCTAAATCCATTTGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199278 60 + 218577 GTTTCCAAGCTCCTTGAGCGGCTGTGCTACGTA-TTTTTGTGTCATTCTAAATCCATTTGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613633 60 - 91010382 GTTTCCAAGCTCCTTGAGCGGCCGTGCTACGTA-TTTTTGTGTCATTCTAAATCCATTTGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17077 60 - 74206 GTTTCCAAGCTCCTTGAGCGGCTGTGCTACGTA-TTTTTGTGTCATTCTAAATCCATTTGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895658 60 + 1687011 GTTTCCAAGCTCCTTGAGCGGCTATGCTACGTA-CCTTTGTGCCATTCTAAATCCATTTGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157050 60 - 204313951 CTGTCCAGGCACCTCGAGTGGCTGTGCCACGTA-TTTGTGTGTCATTCTCAATCCATTAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118805 60 - 16417988 GTTTCCAGGCACCCTCAGTGGCTGGGCTGTGTA-TTTGCGTGTCATTCTAAATCCATTTGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 220151 60 + 306014 GTTTCCAGGTACCTTGAGTGGCTGCGCTGTGTA-TTTGTGTGTCTTTCGAAATCCATTTGG i cebCap1.NW_016108150v1 I 9 C 0 s otoGar3.GL873745 49335 58 + 2165740 TTTTCCAGACTCCTCGAATATCT--GATACACA-TTAGTGTGTCATTCTAAATCCATCCGG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46093112 57 - 120421639 CTTTCCAAACTCCTGGAATGGCTATTATATA-A-TTTGAGTGGCATTCACAATCTTTCT-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30178118 15 - 42124431 ----CCAGAT------------------------TATGTGTAT------------------ i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 553401 51 + 913073 TTTTCTAAACTCTGTCAATGG-TATGATACACATTTTTTGTGTCTC-----ATCCAT---- i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 81108 382 + 211231 I a score=2390568.000000 s hg38.chr3_KI270779v1_alt 48168 185 + 205312 TTTTTTA------AAACG---G-TTT---TCAAAAGT----TAAATTCTAGCTCTT---T---------TTGTTGTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGACAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGGTAAGAGC--- s panTro5.chr3 200035398 191 + 202621043 TTTTTTA------AAACG---G-TTT---TCAAAAGT----TAAATTCTAGCTCtt---t---------ttgttgttgttgttgttTTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGACAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGTGACTCAGCATGCAGAAGGTAAGAGC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 17921 188 + 190779 TTTTTTA------AAACG---G-TTT---TCAAAAGT----TAAATTCTAGCTCTT---T---------TTGTTGTTGTT---GTTTTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGACAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGTGACTCAGCATGCAGAAGGTAAGAGC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 872882 183 - 880730 TTTTTTA------AAACG---GTTTT---TCAAAAGT----TAAATTCTAGCTCTT---T---------TTGTTGTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGATG---GAGGCATAAGAACATCGGAACTGCGACTCAGCATGCAGGAGGTAAGAGC--- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793438 182 + 123690457 TTTTTTG------AAACG---G-TTT---TCAAAAGT----TAAATTCCAGCTTTT---T---------TTGTTGATGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCAGTATGCAGAAGGTAAGAGC--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216773 178 + 180051392 TTTTTTA------AAATA---G-TTT---TGAAAAGT----TAAATTCTAACTTTT---T-------------TTTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGAGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACGTCAGAACTTCGACTCAGCATGCAGAAGGTAAGAGC--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180278916 179 - 181584905 TTTTTTA------GAACG---G-TTT---TGAAAAGT----TAAATTCTAGCTTTT---T---------T--GTTTTGTT------TTAGGAGATAAATTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCT-TCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCGTAAGAACGTCGGAACTTCGACTCTGCATGCAGAAGGTAAGAGC--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40593 178 - 100774 TTTTTTA------AAATA---G-TTT---TGAAAAGT----TAAATTCTAACTTTT---T-------------TTTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGAGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACGTCAGAACTTCGACTCAGCATGCAGAAGGTAAGAAC--- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199338 177 + 218577 TTTTTTA------AAATA---G-TTT---TGAAAAGT----TAAATTCTAACTTTT-----------------TTTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACGTCGGAACTTCGACTCAGCATGCAGAAGGTAAGAGC--- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613693 179 - 91010382 TTTTTTA------AAATG---G-TTT---TGAAAAGT----TAAATTCTAGCTTTT---T---------T--GTTTTGTT------TTAGGAGATAAATTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCT-TCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACGTCGGAACTTCGACTCAGCATGCAGAAGGTAAGAGC--- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17137 180 - 74206 TTTTTTA------GAACG---G-TTT---TGAAAAGT----TAAATTCTAGCTTTT---T---------T--GTTTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACGTCGGAACTTCGACTCAGCATGCAGAAGGTAAGAGC--- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895718 182 + 1687011 TTTTTTA------AAACG---G-TTT---TGAGAAGT----TAAATTCTAACTTTTGTTT---------T--GTTTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCT-TCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACATCGGAACTTCGACTCAGCATGCAGAAGGTAAGAGC--- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157110 186 - 204313951 GTTTTTA------AAGTG---G-TTT---TCAAAAGT----TAAATTCTAGCtttt---t---ttaatttt--ttttttt------ttaGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACATCGGAACTACGACTCAGCATGCAGAAGGTAAGAGC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 118865 190 - 16417988 TTTTTTA------AAGTA---G-TTT---TCAAAAGT----TAAATTCTAGCTTTT---T-AAAAAATTTTGATTTTTTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAGTCTGTCATGAACCTTGACAAGCTGAGATTTGCTGATG---GAAGCATAAGAACGTCGGAACTGCGACTCAGCATGCAGAAGGTAAGAGC--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 220211 189 + 306014 TTTTTTA------ACGTG---G-TTT---TCAAAAGT----TAAATTCTAGCtttt---ttttttaatttt--ttttttt------ttAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAGTCTGTCATGAATCTTGACAAATTGAGATTTGCTGATG---GAAGCATAAGAACATCAGAACTGCGACTCAGCATGCAGAAGGTAAGAGC--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 81490 190 + 211231 TTTTTTA------AAGTG---G-TTT---TGAAAAGT----TAAATTCTAGCTTTT---T-TAAAATTTTTATTATTTTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGCGATTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCagcatgcagaaggtaagagc--- i aotNan1.NW_018494784v1 I 382 C 0 s otoGar3.GL873745 49393 175 + 2165740 TTTTTC----------TG---T-TTT---CTAACAGT----TGAATTCCAGCTTTT---T---------T---TTTTTTT------TAAGGAGATAAAGTTCCCCCAATTAAATCAAATGCTGGAGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGATG---GAAGCATCAGAACATCGGAATTACGACTCAGCATGCAAAAGGTAAGAGC--- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46093169 182 - 120421639 TTTTTTCCCCCATAAGTG---A-TTTCCCCCATATGT----TAAATTCTGGCTTTC---T------------------TT------TAAGGAGATAAAGTTCCTTCAATTAAGGCAAATGCTGGAGAAGAATCGGTTATGAATCTTGACAAGTTGAGATTTGCCGATG---GAAGTATAAGAACATCAGAACTACGCCTAAACATGCAGAAGGTAGGAGC--- i mm10.chr13 C 0 I 746 s canFam3.chr34 30178133 176 - 42124431 ---------------------G-TTT---TCCAAACTCCAATAAATTCTCACTTTT---T------GTCTGTGTGTTTTT------TAAGGAGATAAAATTCCCCCGATTAAACCAAATGCCGGGGAAGAGTCTGTCATGAATCTTGACAAACTGAGATTTGCCAATG---GAAGTGTAAGAACATCTGAACTACGACTCAACATGCAGAAGGTAAGCC---- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 553452 182 + 913073 TTTTTTC------AAATGTTTA-TTT---TTCAAAAT----TAAA-TCTAGCTTTT---T--------------TTTATA------TTAGGAGATAAAGTTCCCCCAATTAAAGCAAATGCTGGAGAAGAATCTGTCATGAATCTTGACAAATTGAGGTTTTCTGAAG---GAAGCATCAGAACGTCGGAGCTACGCCTCAGCATGCAGAAGGTGAGCATGAC i dasNov3.JH577625 C 0 C 0 a score=245069.000000 s hg38.chr3_KI270779v1_alt 48353 23 + 205312 CTGGACTC-GCTCTGGAGTGAGCA s panTro5.chr3 200035589 23 + 202621043 CTGGACTC-GCTCTGGAGTGAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18109 23 + 190779 CTGGACTC-GCTCTGGAGTGAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873065 23 - 880730 CTGGACTC-GCTCTGGAGTGAGCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793620 23 + 123690457 CTGGTCTC-GCTCTGGAGTGAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216951 23 + 180051392 CTGGACTC-GCTCTGGAGTGAGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279095 23 - 181584905 CTGGACTC-GCTCTGGAGTGAGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40771 23 - 100774 CTGGACTC-GCTCTGGAGTGAGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199515 23 + 218577 CTGGACTC-GCTCTGGAGTGAGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613872 23 - 91010382 CTGGACTC-ACTCTGGAGTGAGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17317 23 - 74206 CTGGACTC-GCTCTGGAGTGAGCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895900 23 + 1687011 CTGGACTC-GCTCTGGAGTGAGCA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157296 22 - 204313951 CTGG-CTC-ACTCTGGAGCAAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119055 23 - 16417988 CTGGACTC-ACGCTGCAGCAGACG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 220400 23 + 306014 CTGAACTC-ACTCTGGAGCAAACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 81680 19 + 211231 ctgg-----actctggagcaaaca i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49568 17 + 2165740 CTGGGCT--ACTCTG-----AACA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30178309 23 - 42124431 CTGCACAC-GCTCTGGAGTGTGCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 553634 24 + 913073 CTGCGCTCTGCTCCGGAGGGAGCA i dasNov3.JH577625 C 0 I 4936 e mm10.chr13 46093351 746 - 120421639 I a score=265387.000000 s hg38.chr3_KI270779v1_alt 48376 28 + 205312 GGC--TGGCTGCATACCTGGCCCTGCACTG s panTro5.chr3 200035612 28 + 202621043 GGC--TAGCTGCATACCTGGCCCTGCACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18132 28 + 190779 GGC--TAGCTGCATACCTGGCCCTGCACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873088 28 - 880730 GGC--TGGCTGCATACCTGGCCCTGCACTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793643 28 + 123690457 GGC--GGGCTGCATACCTGGCCCTGCACTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 216974 28 + 180051392 GGC--TGGCTGCATACCTGGCCCTGCACTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279118 28 - 181584905 GGC--TGGCTGCATACCTGGCCCTGCACTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40794 28 - 100774 GGC--TGGCTGCATACCTGGCCCTGCACTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199538 28 + 218577 GGC--CGGCTGCATACCTGGCCCTGCACTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613895 28 - 91010382 GGC--TGGCTGCATACCTGGCCCTGCACTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17340 28 - 74206 GGC--CGGCTGCATACCTGGCCCTGCACTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895923 28 + 1687011 GGC--TGGCTGCATACCTGGCCCTGCACTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157318 24 - 204313951 GGC------TGTGTGCCTGGCCCTGCACTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119078 10 - 16417988 GGC------------ACTGGCT-------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 220423 28 + 306014 GGC--TGGCTGCGCATCTGGCCCTGCACTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 81699 28 + 211231 ggc--tggctgcgcacctggccctgcGCTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49585 30 + 2165740 GACACTGGCTGCCTGGCTGACCCTGTACTG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30178332 26 - 42124431 GGC--TG--TGTGTCCATAGCCTTATGCTG i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=8625.000000 s hg38.chr3_KI270779v1_alt 48404 1 + 205312 G s panTro5.chr3 200035640 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18160 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873116 1 - 880730 G i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793671 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217002 1 + 180051392 G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279146 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40822 1 - 100774 G i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199566 1 + 218577 G i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613923 1 - 91010382 G i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17368 1 - 74206 G i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895951 1 + 1687011 G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157342 1 - 204313951 C i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 220451 1 + 306014 G i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 81727 1 + 211231 G i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30178358 1 - 42124431 G i canFam3.chr34 C 0 I 752 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e saiBol1.JH378155 119088 0 - 16417988 C a score=9555.000000 s hg38.chr3_KI270779v1_alt 48405 1 + 205312 t s panTro5.chr3 200035641 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18161 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873117 1 - 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793672 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217003 1 + 180051392 t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279147 1 - 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40823 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199567 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613924 1 - 91010382 t i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17369 1 - 74206 t i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895952 1 + 1687011 t i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157343 1 - 204313951 T i calJac3.chr2 C 0 I 10 s cebCap1.NW_016108150v1 220452 1 + 306014 T i cebCap1.NW_016108150v1 C 0 I 404 s aotNan1.NW_018494784v1 81728 1 + 211231 T i aotNan1.NW_018494784v1 C 0 I 2 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e saiBol1.JH378155 119088 0 - 16417988 C a score=391000.000000 s hg38.chr3_KI270779v1_alt 48406 59 + 205312 tttgtttttttaaaaacagatctagggggatgcaggtgcagctttgtgtggatg----tact-g s panTro5.chr3 200035642 59 + 202621043 tttgtttttttaaaaacagatctagggggatgcaggtgcagttttgtgtggatg----tact-g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18162 59 + 190779 tttgtttttttaaaaacagatctagggggatgcaggtgcagttttgtgtggatg----tact-g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873118 58 - 880730 tttg-ttttttaaaaagagatctagggggatgcaggtgcagttttgtgtggatg----tact-g i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793673 62 + 123690457 tttg-ttttttaaaaatagatttagggggatgcaggtgcagttttgtgtggatgtttttact-g i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217004 58 + 180051392 tttattttttaaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----tacc-a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279148 58 - 181584905 tttgtttttttaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----tacc-a i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40824 58 - 100774 tttattttttaaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----tacc-a i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199568 58 + 218577 tttgtttttttaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----tacc-g i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613925 58 - 91010382 tttgtttttttaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----tacc-g i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17370 57 - 74206 tttgtttttttaaaaatagattt-gggggatgcaggtgcag-tttgtgtggatg----tacc-g i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 895953 58 + 1687011 tttgtttttttaaaaatagattttgggggatgcaggtgcag-tttgtgtggatg----tacc-g i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157354 56 - 204313951 tgtgtttttattttaatagatttagggg--tacaggtgcagttttgtgtggatg----tact-- i calJac3.chr2 I 10 C 0 s saiBol1.JH378155 119088 43 - 16417988 ---------------ACCgatttagggggatacaggtgcggttttgtgtggatg----tgct-- i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 81731 59 + 211231 GTTGtttttattttaatagatttagggggatacaggtgcagttttgtgtggatg----tgctg- i aotNan1.NW_018494784v1 I 2 I 330 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e cebCap1.NW_016108150v1 220453 404 + 306014 I a score=64049.000000 s hg38.chr3_KI270779v1_alt 48465 10 + 205312 ggaggtggtg s panTro5.chr3 200035701 10 + 202621043 ggaagtggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18221 10 + 190779 ggaagtggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873176 10 - 880730 ggaggtggtg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793735 10 + 123690457 tgatgtggtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217062 10 + 180051392 tgaggtggtg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279206 10 - 181584905 tgaggtggtg i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40882 10 - 100774 tgaggtggtg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199626 10 + 218577 tgaggtggtg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613983 10 - 91010382 tgaggtggtg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17427 10 - 74206 tgaggtggtg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896011 10 + 1687011 tgaggtggtg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157410 6 - 204313951 ----gtggtg i calJac3.chr2 C 0 I 342 s saiBol1.JH378155 119131 6 - 16417988 ----gtggtg i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 81790 330 + 211231 I e cebCap1.NW_016108150v1 220453 404 + 306014 I a score=137737.000000 s hg38.chr3_KI270779v1_alt 48475 13 + 205312 gagtctgggcttt s panTro5.chr3 200035711 13 + 202621043 gagtctgggcttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18231 13 + 190779 gagtctgggcttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873186 13 - 880730 gagtctgggattt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793745 13 + 123690457 gagtctgggcttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217072 13 + 180051392 gagtctgggcttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279216 13 - 181584905 gagtctgggcttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40892 13 - 100774 gagtctgggcttt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199636 13 + 218577 gagtctgggcttt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89613993 13 - 91010382 gagtctgggcttt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17437 13 - 74206 gagtctgggcttt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896021 13 + 1687011 gagtctgagcttt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157758 13 - 204313951 gagtctgggcttt i calJac3.chr2 I 342 C 0 s saiBol1.JH378155 119137 13 - 16417988 gagtgtgcgcttt i saiBol1.JH378155 C 0 I 304 s cebCap1.NW_016108150v1 220857 13 + 306014 gagtctgggcttt i cebCap1.NW_016108150v1 I 404 C 0 s aotNan1.NW_018494784v1 82120 13 + 211231 gagtctgggcttt i aotNan1.NW_018494784v1 I 330 C 0 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=60134.000000 s hg38.chr3_KI270779v1_alt 48488 15 + 205312 tcatgtacctgtcac s panTro5.chr3 200035724 15 + 202621043 tcatgtacccgtcac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18244 15 + 190779 tcatgtacccgtcac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873199 15 - 880730 tcatgtacccgtcac i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793758 15 + 123690457 tcatgtacccatcac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217085 9 + 180051392 tca------cgtcac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279229 9 - 181584905 tca------catcac i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40905 9 - 100774 tca------cgtcgc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199649 9 + 218577 tca------cgtcac i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614006 9 - 91010382 tca------tgtcac i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17450 9 - 74206 tca------cgtcac i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896034 15 + 1687011 tcatgtacccatcac i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157771 15 - 204313951 tcgtgtccccatccc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 220870 15 + 306014 tcgtgtacccatcac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 82133 15 + 211231 tcatgtacccatcac i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e saiBol1.JH378155 119150 304 - 16417988 I a score=2982436.000000 s hg38.chr3_KI270779v1_alt 48503 356 + 205312 ccaagtcgtgtgtgttgtactcagcaggtaattgctcatccccacccctcccgctttttggagcccacagtct----------gttagtccactccgtgtgtccatgtgtactcaccgttcagctcccacttccaagggagaatgtgtgacacttgaccttctga-----ctcacttaggatagtgacctcccattccatccgtctggctgcagaagacatgattgcattcttttttt-atggccaagtagtatttcatggtatatat----gtaccacattttctttatccggtcgtccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcaataaacatacgagGCTGCACCA s panTro5.chr3 200035739 368 + 202621043 ccaagtcgtgtgtgttgtactcagcagataattgctcatccccacccctcccgctttttggatcccccagtct--------ctgttagtccactccgtgtgtccatgtgtactcaccgttcagctcccacttccaagggagaatgtgtgacacttgaccttctgagtcacttcacttaggatagtgacctcccgttccatccgtctggctgcagaagacatgattgcgttcttttttttatggctgagtagtgtttcatggtatatatatatgtaccacattttctttatccggtcatccgttgatgggcacttaggttgattccatgactttgctattgtgaccagtgctgctataaacatacgaggctgcacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18259 361 + 190779 ccaagtcgtgtgtgttgtactcagcagataattgctcatccccacccctcccgctttttggatcccccagtct--------ctgttagtccactccgtgtgtccatgtgtactcaccgttcagctcccacttccaagggagaatgtgtgacacttgactttctgagtcacttcacttaggatagtgacctcccgttccatccgtctggctgcagaagacatgattgcgttctttttt--at-gccaagtagtatttcatggtatatat----gtaccacattttctttatccggtcgtccgttgatgggcacttaggttgattccatgactttgctattgtgaccagtgctgctataaacatacgaggctgcacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873214 363 - 880730 ccaagtcgtgtgtgttgtactcagcagataattgctcatccccacctctcctgctttttggagcccccagtct--------ctgttagtccactccgtgtgtgcatgtgtactcaccgttcagctcccacttccaagggagaatgtgtgacacttgaccttctgagttacttcacttaggatagtgacctcctgttccatccgtctggctagagaagacatgattgtgttctattttt-atggccaagtagtatttcatggtatatat----gtaccacattttctttatccggtcgtccgttgatgggcacttaggttgattccatgactttgctgttgtgactagtgctgcgataaacatacgaggctgcacca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120793773 364 + 123690457 ccaagtcgtgtgtgttgtacccagcaggtaattgctcatccctacccctcccgctttttgaagcccccagtctgttccagtctgttagtccactccgtgtgtccaggtgtactcaccgttcagcgcccacttc-------aagtgagtgacacttgaccttctgagtcacttcacttaggatagtgacctccggttccatccgtgtggctgcagaagacatgattgcgttcttttttt-gtggctgagtagtatttcatggtatatat----gtaccacattttcttcatccggtcgtccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcaataaacatatgaggctgcacca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217094 353 + 180051392 ccaagtcgtgtatgttgtacccagcaggtaattgctcatccccaccccttccgctttttggagcccccagtct--------ctgttagtccactctgtgtggccacgtgtactcaccgttcagtttccacttccaagtaagaat--gtgacacttgacct--tgagtcacttcacttaggagagtga---cctgttccatctgtgtggctgcagaagacatgattgcgttattttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgaagctgcacca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279238 339 - 181584905 ccaagtcatgtatgttgtacccagcaggtaattgctcatccccacccctcccgctttttggagcccccagtct--------ctgttagtccactccgtgtggccacgtgtactcaccattcagctcccactt-caagtgagaat--gtgacacttgaccttctgagtgacct------------------cctgttccatccacatggctgcagaagacatgattgcgttatttttgt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccattgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgaggctgcacca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 40914 353 - 100774 ccaagtcgtgtatgttgtacccagcaggtaattgctcatccccaccccttccgctttttggagcccccagtct--------ctgttagtccactctgtgtggccacgtgtactcaccgttcagtttccacttccaagtaagaat--gtgacacttgacct--tgagtcacttcacttaggagagtga---cctgttccatctgtgtggctgcagaagacatgattgcgttatttttgt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgaggctgcacca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 199658 356 + 218577 ccaagtcgtgtatgttgtacccagcaggtaattgctcatccccacccctcccactttttggagcccccagtct--------ctgttagtccactccgtgtggccacgtgtactcaccgttcagcttccacttccaagtaagaat--gtgacacttgacct--tgagtcacttcacttaggagagtgacctcctgttccatccacgtggctgtagaagacatgagtgcgttattttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccgctgatgggcacttaggttgattccatgactttgctgttgtgactagtgctgcggtaaacatacgaggctgcacca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614015 346 - 91010382 ccaagtcgtgtatgttgtacccagcagg-------tcatccccacccctcccgctttttggagcccccagtct--------ctgttagtccactccgtgtggccacgtgtactcaccattcagcttccacttccaagtaagaat--gtgacacttgaccttctgag-----tcacttaggatagtgacctcctgttccatccacgtggctgcagaagacatgattgcgttattttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgagGCTCCACCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17459 355 - 74206 ccaagttgtgtatgttgtacccagcagataattgctcatcgccacccctcccgctttttggagcccccagtct--------ctgttagtccactccgtgtggccacgtgtactcaccattcagcttccacttccaagtgagaat--gtgacacttgacct--tgagtcacttcacttaggagagtgacctcctgttccatccacgtggctgcagaagacatgagtgcgttattttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccgctgatgggcacttaggttgattccatgactttgctgttgtgactagtgctgcgat-aacatacgaggctgcacca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896049 354 + 1687011 ccaagtcgtgtatgttgtacccagcaggtaattgctcatccccacccctctcgctttttggagcccccagtct--------ctgttagtccactccgtgtggccacatgtactcaccattcagctcccacttccaagtgagcat--gtgacacttgacct--tgagtcacttcacttaggatagtgacctcctgttccatccacgtggctgcagaagacatgattgcgttatttttgt-aaggctgagta---tttcacggtgtttat----gtaccacattttctttgtctggtcat-cattgatgggcacttaggttgattcca-gactttgctattgtgactagtgctgcgataaacatgcgaggctgcacca i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 157786 336 - 204313951 ccaagttgtatatgttgtacccagtaggtaattgctcatccccacccctcccgctttttggagccccgagtct--------ctattagtctac-ccatatgtccatgtatactcacagttcagctcccacttccaagtcagaatgtgcaacagttgaccttcagagttatttcacttagggtaatgacctcctgttccatccaggtggctgggaaagacacgatctagttctttttt--atgtctgagtagtattccacggtgcatat----gtgccc---------------atcatctgttaatgggcacgtaggtgga----------ttgctgttgtgattggtgctgtgatgaacgtaccaggctgcacca i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119454 346 - 16417988 ctgagttgtgtatgttgtacccagta-gtaattgctcatccccacccctcttgctttttggagccctgagtct--------ctattagtctactccgtatgtccatgtgtactcactgttcagctcccacttccaagtcagaatgtgtgacagttgaccttctgagttatttcacttaggataatggtctcccattccatccgggtggccgtgaaagacacgatctagttccttttt--atgtctgagtagtattccatggtgcatat----gtgcct---------------gtcatccgttaatgggcacctaggtggatttcatgactttgctgttgtgactagtgctgtgatgaacgtaccagGCTGCACCA i saiBol1.JH378155 I 304 C 0 s cebCap1.NW_016108150v1 220885 347 + 306014 ccaggttgtgtatgttgtacccagtaggtaattgctcatccccacccctcttgctttttggagccccgagtct--------ctattagtctgctccgtatgtccatgtgtgctcactgttcagctcccacttccaagtcagaatgtgtgacagttgaccttctgagctacttcacttaggataatggcctcccgttccatccaggtggctgtgaaagacacgatctagttctttttt--atgtccgagtagtattccgtggtgcacat----gtgccc---------------gtcatctgttaatgggcacctaggtggatgtcatgactttgctgttgtgagtagtgctgtgatgagcgtgccagGCTGCACCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 82148 347 + 211231 ccaagttgtgtatgttgtacccagtaggtaattgcttatccccacccctcttgctttttggagccccaagtct--------ctattagtctactccgtatgtccatgtgtactcactgttcaggtcccacttccaagtcagaatgtttgacagttgaccttctgagttatttcacttaggataatggcctcccattccatccaggtggctgtgaaagacacgatctagttctttttt--atgtcttagtagtagtccatggtgcatat----gtgccc---------------gtcatccgttaatgggcacctaggtggatcccgtgactttgctgttgtgattagtgctgtgatgaacgtaccaggctgcacca i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 49615 0 + 2165740 C e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=33120.000000 s hg38.chr3_KI270779v1_alt 48859 3 + 205312 GTA s panTro5.chr3 200036107 3 + 202621043 gta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18620 3 + 190779 gta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873577 3 - 880730 gta i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794137 3 + 123690457 gta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217447 3 + 180051392 gta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279577 3 - 181584905 gta i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41267 3 - 100774 gta i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200014 3 + 218577 gta i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614361 3 - 91010382 GTA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 17814 3 - 74206 gta i manLeu1.NW_012101728v1 C 0 I 241 s colAng1.NW_012116910v1 896403 3 + 1687011 gta i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158122 3 - 204313951 gta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119800 3 - 16417988 GGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221232 3 + 306014 GTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 82495 3 + 211231 gta i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49615 3 + 2165740 GTA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=31862.000000 s hg38.chr3_KI270779v1_alt 48862 6 + 205312 TGTGGA s panTro5.chr3 200036110 6 + 202621043 tctGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18623 6 + 190779 tctGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873580 6 - 880730 tctGGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794140 6 + 123690457 tctGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217450 4 + 180051392 --tcGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279580 4 - 181584905 --tcGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41270 4 - 100774 --tcGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200017 4 + 218577 --tcGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614364 4 - 91010382 --TCGA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 896406 4 + 1687011 --tcGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158125 6 - 204313951 tctGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119803 6 - 16417988 TCCGGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221235 6 + 306014 TCTGGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 82498 6 + 211231 tctGGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49618 6 + 2165740 TATGGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e manLeu1.NW_012101728v1 17817 241 - 74206 I a score=440422.000000 s hg38.chr3_KI270779v1_alt 48868 46 + 205312 GGTAAACAGCAGTA-GGACA--TACTCCTCAC-TGTATC----AAGAATATGAA s panTro5.chr3 200036116 46 + 202621043 GGTGAACAGCAGTA-GGACA--TACTCCTCAC-TGTATC----AAGAATATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18629 46 + 190779 GGTGAACAGCAGTA-GGACA--TACTCCTCAC-TGTATC----AAGAATATGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873586 46 - 880730 GGTAAACAGCAGTA-GGACA--TACTCCTCAC-TGTATC----AAGAATATGAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794146 45 + 123690457 GG-AAACAGCAGCA-GGATG--TGCTCCTCAC-TGTACC----AAGAATATGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217454 50 + 180051392 GGGTAAACGCAGTAGGGACGGCTACTTCGCTCACGTATC----AGGAATATGAA i rheMac8.chr6 C 0 I 78 s macFas5.chr6 180279584 46 - 181584905 GGTAAACAGCAGTA-GGACG--TACTCCTCAC-TGTATC----AAGAATATGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41274 46 - 100774 GGTAAACAGCAGTA-GGACG--TACTCCTCAC-CGTATC----AAGAATGTGAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200021 46 + 218577 GGTAAACAGCAGTA-GGACG--TACTCCTCAC-CATATC----AAGAATATGAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614368 46 - 91010382 GGTAAACAGCAGTA-GGACG--TACTCCTCAC-CATATC----AAGAATATGAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18058 46 - 74206 GGTAAACAGCAGTA-GGACG--TACTCCTCAC-CGTATC----AAGAATATGAA i manLeu1.NW_012101728v1 I 241 C 0 s colAng1.NW_012116910v1 896410 46 + 1687011 GGTAAACAGCAGTA-GGACG--TACTCCTCCC-CGTATC----AAGAACATGAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158131 46 - 204313951 GGAAAACGGCAGTA-GGACA--TACTCCTTAC-TGTGTC----AAGAATATGAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119809 46 - 16417988 GGAAAACGGCAGGA-GGACA--TACTCCTCAC-TGTGTC----AAGAATATGAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221241 46 + 306014 GGAAAACGGCAGTA-GGGCA--TACTCCTCAC-TGTGTC----AAGAATATGAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 82504 46 + 211231 GGAAAACGGCAGTA-GGACA--TACTCCTCAC-TGTGTC----AAGAATATGAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 49624 50 + 2165740 GGTAAATAGCAGTA-GGACA--TAGTCCTTCC-TGTATCAAGTAAGAATACAAA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=33840.000000 s hg38.chr3_KI270779v1_alt 48914 3 + 205312 AGA s panTro5.chr3 200036162 3 + 202621043 AGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18675 3 + 190779 AGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873632 3 - 880730 AGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794191 3 + 123690457 AGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180279630 3 - 181584905 AGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41320 3 - 100774 AGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200067 3 + 218577 AGA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614414 3 - 91010382 AGA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18104 3 - 74206 AGA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896456 3 + 1687011 AGA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158177 3 - 204313951 AGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 119855 3 - 16417988 AGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221287 3 + 306014 AGA i cebCap1.NW_016108150v1 C 0 I 291 s aotNan1.NW_018494784v1 82550 3 + 211231 AGA i aotNan1.NW_018494784v1 C 0 I 298 s otoGar3.GL873745 49674 3 + 2165740 AGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e rheMac8.chr6 217504 78 + 180051392 I a score=26881.000000 s hg38.chr3_KI270779v1_alt 48917 4 + 205312 GACC s panTro5.chr3 200036165 4 + 202621043 GACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18678 4 + 190779 GACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873635 4 - 880730 GACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794194 4 + 123690457 GACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180279633 4 - 181584905 GACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41323 4 - 100774 GACC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200070 4 + 218577 GACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614417 4 - 91010382 GACC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18107 4 - 74206 GACC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896459 4 + 1687011 GACC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158180 4 - 204313951 aatc i calJac3.chr2 C 0 I 268 s saiBol1.JH378155 119858 4 - 16417988 aatc i saiBol1.JH378155 C 0 I 285 s otoGar3.GL873745 49677 4 + 2165740 AATC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82553 298 + 211231 I e cebCap1.NW_016108150v1 221290 291 + 306014 I e rheMac8.chr6 217504 78 + 180051392 I a score=25372.000000 s hg38.chr3_KI270779v1_alt 48921 5 + 205312 AGAAG s panTro5.chr3 200036169 5 + 202621043 AGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18682 5 + 190779 AGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873639 5 - 880730 AGAAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794198 5 + 123690457 AGAAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180279637 5 - 181584905 AGGAG i macFas5.chr6 C 0 I 18 s macNem1.NW_012013899v1 41327 5 - 100774 AGGAG i macNem1.NW_012013899v1 C 0 I 18 s cerAty1.NW_012004452v1 200074 5 + 218577 AGGAG i cerAty1.NW_012004452v1 C 0 I 18 s chlSab2.chr4 89614421 5 - 91010382 AGGAG i chlSab2.chr4 C 0 I 18 s manLeu1.NW_012101728v1 18111 5 - 74206 AGGAG i manLeu1.NW_012101728v1 C 0 I 22 s colAng1.NW_012116910v1 896463 5 + 1687011 AGGAG i colAng1.NW_012116910v1 C 0 I 18 s otoGar3.GL873745 49681 5 + 2165740 AGCAG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82553 298 + 211231 I e cebCap1.NW_016108150v1 221290 291 + 306014 I e calJac3.chr2 158184 268 - 204313951 I e saiBol1.JH378155 119862 285 - 16417988 I e rheMac8.chr6 217504 78 + 180051392 I a score=-15524.000000 s hg38.chr3_KI270779v1_alt 48926 7 + 205312 TGCA------CTT------------------------ s panTro5.chr3 200036174 7 + 202621043 TGCA------CTT------------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18687 7 + 190779 TGCA------CTT------------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873644 7 - 880730 TGTA------CTT------------------------ i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794203 7 + 123690457 TGCA------CTT------------------------ i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180279660 4 - 181584905 TGCA--------------------------------- i macFas5.chr6 I 18 C 0 s macNem1.NW_012013899v1 41350 4 - 100774 TGCA--------------------------------- i macNem1.NW_012013899v1 I 18 C 0 s cerAty1.NW_012004452v1 200097 4 + 218577 TGCA--------------------------------- i cerAty1.NW_012004452v1 I 18 C 0 s chlSab2.chr4 89614444 7 - 91010382 TGCACTT------------------------------ i chlSab2.chr4 I 18 C 0 s colAng1.NW_012116910v1 896486 7 + 1687011 TGCA---CTT--------------------------- i colAng1.NW_012116910v1 I 18 C 0 s otoGar3.GL873745 49686 27 + 2165740 ----------TCTGAGTTAGATAAAAGTACCAAAGTC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82553 298 + 211231 I e cebCap1.NW_016108150v1 221290 291 + 306014 I e calJac3.chr2 158184 268 - 204313951 I e saiBol1.JH378155 119862 285 - 16417988 I e manLeu1.NW_012101728v1 18116 22 - 74206 I e rheMac8.chr6 217504 78 + 180051392 I a score=227503.000000 s hg38.chr3_KI270779v1_alt 48933 44 + 205312 CTTCTCCACATA-------GAAGGTCAGCAGGCCAGGGCAGAATTAGTGAC s panTro5.chr3 200036181 44 + 202621043 CTTCTCCACATA-------GAAGGTCAGCAGGCCAGGGCAGAATTAGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18694 44 + 190779 CTTCTCCACATA-------GAAGGTCAGCAGGCCAGGGCAGAATTAGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873651 44 - 880730 CTTCTCCACATA-------GAAGGTCAGCAGGCCAGGGCAGAATTAGTGAC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794210 44 + 123690457 CTTTTCCACAGA-------GAAGGTCAGCAGGCTAGGGCAGAATTAGTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180279664 44 - 181584905 CTTTTCCACATA-------GAAGGTCAGCAGGCTAGGGCAGAATTAGTGAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41354 44 - 100774 CTTTTCCACATA-------GCAGGTCAGCAGGCTAGGGCAGAACTAGTGAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200101 44 + 218577 CTTTTCCACATA-------GAAGGTCAGCAGGCTAGGGCAGAATTAGTGAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614451 41 - 91010382 ---TTCCACATA-------GAAGGTCAGCAGGCTAGGGCAGAATTAGTGAC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18138 44 - 74206 CTTTTCCACATA-------GAAGGTCAGCAGGCTAGGGCAGAATTAGTGAC i manLeu1.NW_012101728v1 I 22 C 0 s colAng1.NW_012116910v1 896493 39 + 1687011 ---TTCCACACA-------GAAGGTCAGCAGGCTAGGGCAGAGTTAGTG-- i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 49713 51 + 2165740 CTTTGCCACATGAAAGGCTGAAGGTCAGCAGTCTAGGACGGAATTAGCAAC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82553 298 + 211231 I e cebCap1.NW_016108150v1 221290 291 + 306014 I e calJac3.chr2 158184 268 - 204313951 I e saiBol1.JH378155 119862 285 - 16417988 I e rheMac8.chr6 217504 78 + 180051392 I a score=16772.000000 s hg38.chr3_KI270779v1_alt 48977 3 + 205312 TGC s panTro5.chr3 200036225 3 + 202621043 TGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18738 3 + 190779 TGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873695 3 - 880730 TGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794254 3 + 123690457 TGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217582 3 + 180051392 TGC i rheMac8.chr6 I 78 C 0 s macFas5.chr6 180279708 3 - 181584905 TGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41398 3 - 100774 TGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200145 3 + 218577 TGC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614492 3 - 91010382 TGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18182 3 - 74206 TGC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896532 1 + 1687011 --C i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 49764 3 + 2165740 CGC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82553 298 + 211231 I e cebCap1.NW_016108150v1 221290 291 + 306014 I e calJac3.chr2 158184 268 - 204313951 I e saiBol1.JH378155 119862 285 - 16417988 I a score=5283.000000 s hg38.chr3_KI270779v1_alt 48980 2 + 205312 --TT s panTro5.chr3 200036228 2 + 202621043 --TT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18741 2 + 190779 --TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873698 2 - 880730 --TT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794257 2 + 123690457 --TT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217585 2 + 180051392 --TT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279711 2 - 181584905 --TT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41401 2 - 100774 --TT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200148 2 + 218577 --TT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614495 2 - 91010382 --TT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18185 2 - 74206 --TC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896533 2 + 1687011 --TT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158452 2 - 204313951 --TC i calJac3.chr2 I 268 C 0 s saiBol1.JH378155 120147 2 - 16417988 --TC i saiBol1.JH378155 I 285 C 0 s otoGar3.GL873745 49767 2 + 2165740 AG-- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82553 298 + 211231 I e cebCap1.NW_016108150v1 221290 291 + 306014 I a score=1362060.000000 s hg38.chr3_KI270779v1_alt 48982 148 + 205312 AGCATCCAGGACAGCCTTCTGTGGTTCACTC------GTGTGTGCTTGGGCATGACCTCCGTGCCC-TGACCGTCGCTGGCTGTC-ATGGATGAGTCACA-GTGTGGAGGAGAGGGAGCCGCAGGA-CTGCCGGAGAAGCTCCGTCCCCagcaggg-c-a s panTro5.chr3 200036230 148 + 202621043 AGCATCCAGGACAGCCTTCTGTGGTTCACTC------GTGTGTGCTTGGGCATGACCGCCGTGCCC-TGACCGTCGCTGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCCGCAGGA-CCGCCGGAGAAGCTCTGTCCCCagcaggg-c-a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18743 148 + 190779 AGCATCCAGGACAGCATTCTGTGGTTCACTC------GTGTGTGCTTGGGCATGACCGCCGTGCCC-TGACCGTCGCTGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCCGCAGGA-CCGCCGCAGAAGCTCCGTCCCCAGCAGGG-C-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873700 148 - 880730 AGCATCCAGGACAGCCTTCTGTGGTTCATTC------GTGTGTGCTTGGGCATGACCTCCATGCCC-TGACCGTCGCTGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCCGCAGGA-CCGCCGGAGAAGGTCAGTCCCCagcaggg-c-a i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794259 148 + 123690457 AGCATCCAGGACAGCCTTCTGTGGTTCACTC------GTGTGTGCTTGGGCGTGACCTCCGTGCCC-TGACCGTTGCTGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCCACAGGA-CCACCGTAGAAGCTCAGTCCCCAGCAGGG-C-A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217587 145 + 180051392 AGCATCCAGGACAAGCTCTCC--GTTCACTG------TGGTGTGCTTGGTCGTGACCT-CGTGCCTGGGACCGTCGCACGGTGTCTAGGGATGAGTCACATGCGTGG-GGAGAGGGAGCAGCAGGG-CACC--GAAGAGCTCAGG-CCCAGCAGGGCC-A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279713 148 - 181584905 AGCATCCAGGACAGCCTTCTCCGGTTCACTC------GTGTGTGCTTGGGCGTGACCTCCGTGCCC-TGACCGTTGCAGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCAGCAGGA-CCACGGGAGAAGCTCAGTCCCCAGCAGGG-C-A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41403 148 - 100774 AGCATCCAGGACAGCCTTCTCCGGTTCACTC------GTGTGTGCTTGGGCGTGACCTCCGTGCCC-TGACCGTTGCAGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCAGCAGGA-CCACTGGAGAAGCTCAGTCCCCAGCAGGG-C-A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200150 148 + 218577 AGCATCCAGGACAGCCTTCTCTGGTTCACTC------GTGTGTGCTTGGGCGTGACCTCTGTGCCC-TGACCGTCGCAGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCAGCAGGA-CTGCCGGAGAAGCTCAGTCCCCAGCAGGG-T-A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614497 148 - 91010382 AGCATCCAGGACAGCCTTCTCTGGTTCACTC------GTGTGTGCTTGGGCGTGACCTCCGTGCCC-TGACCGTCACGGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCAGCAGGA-CTGCCGGAGAAGCTCAGTCCCCAGCAGGG-C-A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18187 148 - 74206 AGCATCCAGGACAGCCTTCTCTGGTTCACTC------GTGTGTGCTCGGGCGTGACCTCCGTGCCC-TGACCGTCGCAGGCTGTC-ATGGATGAGTCACA-GCGTGGAGGAGAGGGAGCAGCAGGA-CTGCCGGAGAAGCTCAGTCCGCAGCAGGG-C-A i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896535 149 + 1687011 GGCATCCAGGACGGCCTTCTCTGGTTCGCTC------GTGTGTGCTTGGGCGTGACCTCCGTGCCC-TGACCGTCGCTGGCTGTC-GTGGATGAGTCACA-GCGAGGAGGAGAGGGAGCAGCAGGACCTGCCGGAGAAGCTCAGTCCCCAGCGGGG-C-G i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158454 146 - 204313951 AGCATCCAGGACAGCCTTCTCTGGTTCACTC------GAATGTGCCTGGGCATGGCCTCTGTGCTC-TGACCATCACTGGCTGTC-GTGGATGAGTCACA-GTGTGGAGGAGATGGAGCCGCAGGG-C-GCCTGAGAAGCTcagtccccagcagag-c-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120149 146 - 16417988 AGCATGCAGGACAGCCTTCTCTGGTTCACTC------GAACGTGCCTGGGCGCGGCCTCCGTGCTC-TGACCATCGCTGGCTGCC-ATGGATGAGTCACA-GTGTGGAGGAGAGGGAGCCGCAGGA-C-GCCTGAGAAGCTCAGTCCCCAGCAGGg-c-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221581 152 + 306014 AGCATCCAGGACAGCCTTCTCTGGTTCACTCGCATGTGCATGTGCCTGGGCGTGGCCTCCGTGCTC-TGACCATCGCCGGCTGTC-GTGGATGAGTCACA-GTGTGGAGGAGAGGGAGCCGCAGGA-C-GCCTGAGAAGCTCAGTCCCCAGCAGGg-c-- i cebCap1.NW_016108150v1 I 291 C 0 s aotNan1.NW_018494784v1 82851 147 + 211231 AGCATCCAGGACAACCTTCTCTGGTTCACTC------GCATGTGCCTGGGCGTGGCCTCTGTGCTC-TGACCATCGCTGGCTGTC-ATGGATGAGTCACA-GTGTGGAGGAGAGGGAGCCGCAGGA-C-GCCTGAGAAGTTCAGTCCCCAGCGGGG-CA- i aotNan1.NW_018494784v1 I 298 I 21 s otoGar3.GL873745 49769 123 + 2165740 GGCATCAGGGACAGCCTGCTCTGGTTCACTC------CTGTGTGCTGAAGCCAGGCTTCCACCCTC-TGAC----------TGTT-GT-----------A-GCCTAAAGGA---GGAGCAGTGGAA-T-GTCAGAGCAGCACAATCCTCTGCTGGG-C-A i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=465817.000000 s hg38.chr3_KI270779v1_alt 49130 73 + 205312 gctttctcttag-aggtttcctggagttc--aacacaacact--ggtgcttacatctca--ggccca-gatattgatcatg s panTro5.chr3 200036378 73 + 202621043 gctttctcttag-aggtttcctggagttc--aacacaacact--ggtgcttacatctca--ggccca-gatattgatcatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18891 73 + 190779 GCTTTCTCTTAG-AGGTTTCCTGGAGTTC--AACACAACACT--GGTGCTTACATCTCA--GGCCCA-GATATTGATCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873848 73 - 880730 gctttctcttag-aggtttcctggagttc--aacacaacact--ggtgcttacatctca--ggccca-gatattgatcatg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794407 71 + 123690457 GCTTTCTC--AG-AGGTttcctggagttc--aacacaacact--ggtgcttacatctca--ggccca-gatattgatcatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217732 76 + 180051392 GCTTGCTCTTCGCAGGTTCCT--GGGTTA--AAC-TAATACTGCGTCGCTTACATCTCAGCGTCCCATCATATTGATCGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279861 74 - 181584905 GCTTTCTCTTTGCAGGTTTCCTGGAGTTC--AACACAATACT--GGTGCTTATATCTCA--GGCCCA-CATATTGATCGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41551 74 - 100774 GCTTTCTCTTCGCAGGTTTCCTGGAGTTC--AACATAATACT--GGTGCTTACATCTCA--GGCCCA-CATATTGATCATG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200298 74 + 218577 GCTTTCTCTTCGCAGGTTTCCTGGAGTTC--AACATAATACT--GGTGCTTACATCTCA--GGCCCA-CATATTGATCATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614645 74 - 91010382 GCTTTCTCTTAGCAGGTTTCCTGGAGTTC--AACATAATACT--GGTGCTTACATCTCA--GGCCCA-CATATTGATCATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18335 74 - 74206 GCTTTCTCTTCGCAGGTTTCCTGGAGTTC--AACATAATACT--GGTGCTTACATCTCA--GGCCCA-CATATTGATCATG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896684 74 + 1687011 GCTTCCTCTTCGCAGGTTTCCTGGCGTTC--AACACAATACT--GCTGCTTACATCTCA--GGCCCA-CATACTGATCATG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158600 43 - 204313951 --------------------------------acacaacact--ggtgcttacatctca--gg-cca-gatagtgaccatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120295 44 - 16417988 --------------------------------gcacaacact--ggtgcttacatctca--ggccca-gatactgaccgtg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221733 44 + 306014 --------------------------------acacaacact--ggtgcttacatctca--ggccca-gatattgaccatg i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 49892 76 + 2165740 GCTTTCTCTTAGCAGGTTTCCTGAATATCATAacaggatgct--cttgcttacatctct--tgctca-gaaatcaatcgca i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I e aotNan1.NW_018494784v1 82998 21 + 211231 I a score=2403139.000000 s hg38.chr3_KI270779v1_alt 49203 238 + 205312 tcatcatgcctggcttccagcagctc-ggaaacgtctttaAGCTAGACCTGTTGCTGCCCCTAAATATACTCAGCAGAGAGGGAGAGTGGGCGGCAGGTGGACAGTGATCTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtttgccgtccagtatggcagccattagccat--g-gggccgtggagaacctgatatatagtcagtct- s panTro5.chr3 200036451 238 + 202621043 tcatcatgcctggcttccagcagctc-ggaaacgtctttaagctggACCTGTTGCTGCCCCTAAATATACTCAGCAGAGAGGGAGAGTGGGCGGCGGGTGGACAGTGATCTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtttgccatccagtatggcagccattagccat--g-gggccgtggagaacctgatatatggtcagtct- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 18964 238 + 190779 TCATCATGCCTGGCTTCCAGCAGCTC-GGAAACGTCTTTAAGCTGGACCTGTTGCTGCCCCTAAATATACTCAGCAGAGAGGGAGAGTGGGCAGCGGGTGGACAGTGATCTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtttgccatccagtatggcagccattagccat--g-gggccgtggagaacctgatatatggtcagtct- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 873921 238 - 880730 tcatcacgcctggcttccagcagctc-ggaaacatctttaagctggACCTGTTGCTGCCCCTGAATATACTCAGCAGAGAGGGAGAGTGGGCGGCGAGTGGACAGTGATCTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtttgccgtccagtatggcagccattagccat--g-cagccgtggagaacctgatatatggtcagtct- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794478 240 + 123690457 tcatcacgcctggcttccagcagctc-ggaaatgtctttaagctggACCTGTTGCTGCCCCTAAATATACTCAGAAGAGAGGGAGAGTGGGCGGCGGGTGGAAAGTGATCTGTGCTGCCTGTGCTG-CTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtctgccgtccagtatggcagccattagccacagg-gggctgtggagaacctgatatatagtcagtct- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 217808 241 + 180051392 T-ATCATGCCTGACTTCCAGCAGCTT-GGAACTGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCGGTGGGTGGAAACTGATGTGTGCAGCCTGTGCTG-CTGGGAGTCG------------------gtccagtgggaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180279935 242 - 181584905 TCATCATGCCTGACTTCCAGCAGCTT-GGAAATGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCAGCAGGTGGAAACTGATGTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtgagaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41625 230 - 100774 TCATCATGCCTGACTTCCAGCAGCTT-GGAAATGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCAGCAG------------GTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtgggaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200372 242 + 218577 TCATCATGCCTGGCTTCCAGCAGCTT-GGAAATGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGCGAGTGGGCGGCAGGTGGAAACTGATGTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccaataggaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614719 242 - 91010382 TCATCATGCCTGGCTTCCAGCAGCTT-GGAAATGTCTTTAAGCCGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCGGTGGGTGGAAACTGATGTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtcccataggaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtgtggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18409 242 - 74206 TCATCATGCCTGGCTTCCAGCAGCTT-GGAAATGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCGGTGGGTGGAAACTGATGTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccaataggactgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 896758 242 + 1687011 TCATCATGCCTGGCTTCCAGCAGCTT-GGAAATGTCTTTAAGCTGGGCCTGTTGCTGCCCCTGAATATACTCAGAAGCGAGGGAGAGTGGGCGGCGGGTGGAAACCGATCTGTGCGGCCTGTGCTG-CTGGGAGTCG------------------gtccagtaggaccgtctgtgacgatggaaatgttctgagtgtttgccgtccagtatggcagccattagccacaga-gggctgtggagaacttgatatatagtcagtct- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 158643 261 - 204313951 tcatcacacctggcttccagcagctc-ggaaatgtctttaagctgggCCTGTTGCTGCCCCTAAATATACTCAGAAGAGGGGGAGAGTGGGCCGTGGGTGGAAACTGATCTCTGCAGCCTGTGCTT-CTGGGAGTCAGCCTCCCACATcaggactgtccaataggactgcccgtgatggcagaaatgttccaagtctttgccgtccagtatggcaaccactagccacgggagggctatggagaacttggtatatagtcagtct- i calJac3.chr2 C 0 I 146 s saiBol1.JH378155 120339 260 - 16417988 tcatcacacctggcttccagcagctc-ggaaatgtctttaagctgggcctcttgctgcccctaaatatactcagaagaaggggagagtgggcagcaggtggaaactcatctctgcAGCCTGTGCTG-CTGGGAGTCAGCCTCCCACATCAGGCctgtctagtaggaccggccgtgatgacagaaatgttccagccctttgccgtccagtgtggcgagcactagccacggg-gggctgtggagaacttggtatatagtcagtct- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 221777 260 + 306014 tcatcacacctggcttccagcagctt-ggaaatgtctttaagctgggCCTGTTGCTGCCCCTAAATATACTCAGAAGAGGGGGAGAGTGGGCAGCGGGTGGAAACTGATCTCTGCAGCCTGTGCTG-CTGGGAGTCAGCCTTCCACATcaggactgtccagtaggaccgtccatgatgacagaaatgttccaagtctttgccgtccagtatggcaaccactagccactgg-gggctatggagaacttggtatatagttagtct- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83019 260 + 211231 TCATCACACCTGGCTTCCAGCAGCCC-AGAAATGTCTTTAAGCTGAGCCTGTTGCTGCCCCTAAATATACTCAGAAGAGGGGGAGAGTGGGCAGCAGGTGGAAACTGATCTCTGAGGCCTGTGCTG-CTGGGAGTCAGCCTCCCACATCGGGActgtccggtaggaccatccgtgatgacagaagtgttccaagtctttgccgtccagtatggcaaccactagccatggg-gggctatggagaacttggtatatagtcagtct- i aotNan1.NW_018494784v1 I 21 I 149 s otoGar3.GL873745 49968 260 + 2165740 tggccatggttagcttccagtgactctggatgtgtcttta--ctgggCCTGCTACTGCCCCTGAGGAGATTCAGAA-AGGAGGAGAGTGGGCACTAAGTGAAAGCTGACCCATGTAGCATGTGCTGTCCAAGAGTTGGCCTTCTGGACTAGGActattcattggtaccttctgtgatgatagaaatgttctgaatctttgttgtcctatatgatgaccactacccataca-tggctacagatcacttgaaatgtgatcagtctt i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=48284.000000 s hg38.chr3_KI270779v1_alt 49441 5 + 205312 aagaa s panTro5.chr3 200036689 5 + 202621043 aagga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19202 5 + 190779 aagga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874159 5 - 880730 aagaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794718 5 + 123690457 aagaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218049 5 + 180051392 gagaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280177 5 - 181584905 aagaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41855 5 - 100774 gagaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200614 5 + 218577 gagaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614961 5 - 91010382 aagaa i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18651 5 - 74206 gagaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897000 5 + 1687011 gagaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159050 5 - 204313951 aAGAA i calJac3.chr2 I 146 C 0 s saiBol1.JH378155 120599 5 - 16417988 aagaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222037 5 + 306014 aaaaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83428 5 + 211231 AAGAA i aotNan1.NW_018494784v1 I 149 C 0 s otoGar3.GL873745 50228 5 + 2165740 aaaaa i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30178359 752 - 42124431 I a score=75895.000000 s hg38.chr3_KI270779v1_alt 49446 7 + 205312 actcaat s panTro5.chr3 200036694 7 + 202621043 actgact i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19207 7 + 190779 actgact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874164 7 - 880730 actgaat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794723 7 + 123690457 actgaat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218054 7 + 180051392 actgaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280182 7 - 181584905 actgaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41860 7 - 100774 actgaat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200619 7 + 218577 actgaat i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614966 7 - 91010382 actgaat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18656 7 - 74206 actgaat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897005 7 + 1687011 actgaat i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159055 7 - 204313951 ACTGAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120604 7 - 16417988 accgagt i saiBol1.JH378155 C 0 I 149 s cebCap1.NW_016108150v1 222042 7 + 306014 actgagt i cebCap1.NW_016108150v1 C 0 I 149 s aotNan1.NW_018494784v1 83433 7 + 211231 ACTGAGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 50233 7 + 2165740 actgaat i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30179111 7 - 42124431 ACCAGAT i canFam3.chr34 I 752 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=13923.000000 s hg38.chr3_KI270779v1_alt 49453 1 + 205312 t s panTro5.chr3 200036701 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19214 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874171 1 - 880730 t i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794730 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218061 1 + 180051392 t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280189 1 - 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41867 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200626 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614973 1 - 91010382 t i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18663 1 - 74206 t i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897012 1 + 1687011 t i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159062 1 - 204313951 T i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120760 1 - 16417988 T i saiBol1.JH378155 I 149 C 0 s cebCap1.NW_016108150v1 222198 1 + 306014 T i cebCap1.NW_016108150v1 I 149 C 0 s aotNan1.NW_018494784v1 83440 1 + 211231 T i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 50240 1 + 2165740 t i otoGar3.GL873745 C 0 I 414 s canFam3.chr34 30179118 1 - 42124431 T i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=111008.000000 s hg38.chr3_KI270779v1_alt 49454 9 + 205312 CCTCTAATA s panTro5.chr3 200036702 9 + 202621043 CCTCTAATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19215 9 + 190779 CCTCTAATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874172 9 - 880730 CCTCTAATA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794731 9 + 123690457 CCTCTAATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218062 9 + 180051392 CCTCTAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280190 9 - 181584905 CCTCTAATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41868 9 - 100774 CCTCTAATA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200627 9 + 218577 CCTCTAATA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614974 9 - 91010382 CCTCTAATA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18664 9 - 74206 CCTCTAATA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897013 9 + 1687011 CCTCTAATA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159063 9 - 204313951 CCTCTAATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120761 9 - 16417988 CCTCTAATA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222199 9 + 306014 CCTCTAGTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83441 9 + 211231 CCTCTAATA i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30179119 9 - 42124431 CTTCTAATA i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 50241 414 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=632890.000000 s hg38.chr3_KI270779v1_alt 49463 54 + 205312 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTGC-------T-------ATTTGCAAGAATTTC s panTro5.chr3 200036711 54 + 202621043 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19224 54 + 190779 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874181 54 - 880730 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794740 54 + 123690457 ACAAGGATTCTT-GTCCAAGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218071 54 + 180051392 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280199 54 - 181584905 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGGAAGAATTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41877 54 - 100774 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200636 54 + 218577 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89614983 54 - 91010382 ACAAGGATTCTT-GGCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18673 54 - 74206 ACAAAGATTCTT-GTCCATGAATGAGATCTCTTGTCTAC-------T-------ATTTGCAAGAATTTC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897022 54 + 1687011 ACAAGGATTCTT-GTCCATGAATGAGATCTCCTGTCCAC-------T-------ATTTGCAAGAATTTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159072 54 - 204313951 ACAAGGATTCTT-GTTCATGAATGAGGTCTCTTGTTTAC-------T-------ATTAGCAAGAATTTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120770 54 - 16417988 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTTTAC-------T-------GTTGGCAAGAATTTC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222208 54 + 306014 ACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTTTAC-------T-------ATTGGCAAGAATTTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83450 54 + 211231 ACAAGAATTCTT-GTCCATGAATGAGATCTCTTGTTGAC-------T-------ATTGGCAAGAATTTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 50655 60 + 2165740 ATAGGGATTCTT-GTCTGTGAATGAGATCTC-TGTCTCCTTGAGGTT-------GTTTATAAGAATTTC i otoGar3.GL873745 I 414 I 263 s canFam3.chr34 30179128 59 - 42124431 -CAGGGATTCTTGGTCCACAAATGAGATCTC-TGTCCAG-------TTGAAGTCATTTGCAAGATTTC- i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=809707.000000 s hg38.chr3_KI270779v1_alt 49517 104 + 205312 TGCG----TATTTTCTAGAAA---GAAGTCCACTGCTTTAGTCCTATTCTGA--AAGGCATTTGGTGTT------------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACAATTTTCAGAGGCCC s panTro5.chr3 200036765 103 + 202621043 TGCG----TATTTTCTAGAAA---GAAGTCCACTGCTTTAGTCCTATTCTGA--AAGGCATTTGGTGTT------------AGA----CACAAGAGAACAGGTACCCTGCTG-ACA-TTTTCAGAGGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19278 103 + 190779 TGCG----TATTTTCTAGAAA---GAAGTCCACTGCTTTAGTCCTATTCTGA--AAGGCATTTGGTGTT------------AGA----CACAAGAGAACAGGTACCCTGCTG-ACA-TTTTCAGAGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874235 103 - 880730 TGTG----TATTTTCTAGAAA---GAAGTCCACTGCTTTAGTCCTATTCTGA--AAGGCGTTTGGTGTT------------AGA----CAGAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794794 103 + 123690457 TGCA----TATTTTCTGAAAA---GAAGTCCATTGCTTTAGTCGTATTCTGA--AAGGCATTTGGTGTT------------AGA----CACAAGAGAACAGGTTCGCTGCTG-ACA-TTTTCAGAGGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218125 104 + 180051392 TGCG----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGA--AAGGCATATGGTGTTA-----------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280253 104 - 181584905 TGCA----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGA--AAGGCGTTTGGTGTTA-----------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 41931 104 - 100774 TGCG----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGA--AAGGCGTTTGGTGTTA-----------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200690 104 + 218577 TGCG----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGA--AAGGCATATGGTGTTA-----------AGA----CACAAGAGAACACGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615037 104 - 91010382 TGCG----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTGTTCTGA--AAGGCGTTTGGTGTTA-----------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i chlSab2.chr4 C 0 I 156 s manLeu1.NW_012101728v1 18727 104 - 74206 TGCG----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGA--AAGGCGTTTGGTGTTA-----------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897076 104 + 1687011 TGCG----TATTTTCTAAAAA---GAAGTCCATTGCTTTAGTGCTATTCTGA--AAGGCATATGGTGTTA-----------AGA----CACAAGAGAACAGGTTCCCTGCTG-ACA-TTTTCACAGGCCT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159126 106 - 204313951 --CGTGAATATTTG-TAAA------AAGTCCA-TGCTTTTGTCCTATTCCA---AAGGCATTTGGTGTTGCAG--AC--ACAGA----CACAAGAGCAAAGGTTC-CTGCTG-ACA-TTGTCAGAGGCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 120824 111 - 16417988 TGTGTGAGTATTTTCTACA------AAGTCCA-TGATTTTGTCCTATTCCG---AAGGCGTTTGGTGTTGCAGACAC--ACAGG----CACAAGAGCAAAGTTTC-CTGCTG-ACA-TTCTCAGAGGCCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222262 101 + 306014 TGCGTGAGTATTTTCTAAA------AAGTCCA-TGCTTTTGTCCTATTCCA---AAGGCGTTTGGTGTTGCAG----------A----CACAAGAGC--AGTTTC-CTGCTG-ACA-TTCTCAGAGGCCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83504 111 + 211231 TGCGTGAGTATCTTCTAAA------AAGTCCA-TGCTTTTGTCCTGTTCCG---AAGGTGTTTGGTGTTGCAGACAC--ACAGA----CACAAGAGCAAAGGTTC-CTGCTA-ACA-TTCTCAGAGGCCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 50978 117 + 2165740 TGAG----CATTTTCTAAAAA---GAAGTCTATTGCTTTAGTCACATTCTGAAGAGGGAGTCCAGTGGCACACACTT--AGAGACCACCAAAAGAGATAAGATTACCCTCTA-CCA-TTCTC--AGGTCT i otoGar3.GL873745 I 263 C 0 s canFam3.chr34 30179187 114 - 42124431 TGTGGAGACGTTTTCCGAAAAGAGGAAGTCCC---TTTTAGTTCTATCCTGA--A--GCGTCCAGTGGCACAAACTCTAATCAT----CAAAAGAAAAAAGTTGC-ATACTGCATA-CTTCTGTAGG--- i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=1045312.000000 s hg38.chr3_KI270779v1_alt 49621 105 + 205312 GTGCCCTTCGGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGTTTTGTGGAACGGTGAGAAGAACAGCGTGACTA-AGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG s panTro5.chr3 200036868 105 + 202621043 GTGCCCTTCAGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGCGTGACTA-AGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19381 105 + 190779 GTGCCCTTCAGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGCGTGACTA-AGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874338 105 - 880730 GTGCCCTTCGGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAATGGTGAGAAGAACAGCGTGACTA-AGGCACAGAAG-----------------GCTGAGTGATGCACTGCAGTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120794897 105 + 123690457 GTGCCCTTCAGTCTTCAAGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAAAGGTGAGAAGAACAGCGTGACTA-AGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218229 105 + 180051392 GTGCCCTTCAGTCTTGAAGTAAG-ATTGAGCTTGAGGGAGGCTTTCTGGAACGGTGAGAAGAATAGCGTGATTA-AGGCACAGAAG-----------------GCTGAGTGATGCCTTGCAGTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280357 102 - 181584905 GTGCCCTTCGGTCTTCAAGTGAG-GCTGGGCTTGAAGGAGGCTTTGTGGAACGGTG---AGAACGGTGTGACTA-AGGCACGGAAG-----------------GCTAAGGGATGCCCTGCAGTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42035 105 - 100774 GTGCCCTTCGGTCTTGAAGTAAG-ATTGAGCTTGAGGGAGGCTTTCTGGAACGGTGAGAAGAATAGCGTGATTA-AGGCACAGAAG-----------------GCTGAGTGATGCCTTGCAGTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200794 102 + 218577 GTGCCCTTCGGTCTTCAAGTGAG-GCTGGGCTTGAAGGAGGCTTTGTGGAACGGTG---AGAACAGTGTGACTA-AGGCACAGAAG-----------------GCTAAGGGATGCTCTGCAGTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615297 105 - 91010382 GTGCCCTTCAGTCCTGAAGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGCGTGACTA-AGGCACAGAAG-----------------GCTAAGGGATGCCCTGCAGTA i chlSab2.chr4 I 156 C 0 s manLeu1.NW_012101728v1 18831 102 - 74206 GTGCCCTTCGGTCTTCAAGTGAG-GCTGGGCTTGAAGGAGGCTTTGTGGAACGGTG---AGAACAGTGTGACTA-AGGCACAGAAG-----------------GCTAAGGGATGCTCTGCAGTA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897180 105 + 1687011 GTGCCCTTCAGTCTTCAAGTGAG-GTTGAGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGTGTGACTA-AGGCACAGAAG-----------------GCTGAGTGGTGCCTTGCAGTA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159232 102 - 204313951 GTGCACTTCATTCTTCAAGTGAG-GCTGGGCTTGAGAGAGGCTTTGTGGAATGCTG---AGAACAGCATGACTA-AGGCCCAGAAG-----------------GCTGAGGGATATCCTGCAGGA i calJac3.chr2 C 0 I 132 s saiBol1.JH378155 120935 102 - 16417988 GTGCACTTCATTCTTTAAGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAATGCTG---AGAACAGCATGACTG-AGGCACAGAAG-----------------GCTGAGGGATGCCCTGCAGGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222363 102 + 306014 GTGCACTTCATTCTTCAAGTGAG-GCTGGGCATGAGGGAGGCTTTGTGGAATGCCA---AGAACAGCATGACCA-AGGCACAGAAG-----------------GCTGAGGGATGCCCTGCAGGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83615 102 + 211231 GTGCACTTCATTCTTCAAGTGAG-GCTGGGCTTGAGGGAGGCTTTGCGGAATGCTG---AGAACAGCATGACTA-AGGCACGGAAG-----------------GCCGAGGGATGCCCTGCAGGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 51095 102 + 2165740 AAGTGTTTCTGTCTCCAGATG-G-ACTGGGCTTGAGGGAGGCTTCATGGAGCCAGA---AGAATAACATGAGTAGAGGTACAGAAG-----------------GTCAAGTGATGCTCTGCAGAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30179301 113 - 42124431 ----------AACTTCAGAGAAGTTCTGGGCTTTAGGGAAACTTCCTGGAAAGGTAAGGCGAATAGTGCGAGTG-AAAGGCAGAGGTTTGTTTTAGGAAACCAGCCAAGAGGAACTGAGCAGAA i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=1492022.000000 s hg38.chr3_KI270779v1_alt 49726 143 + 205312 CTTTTGTAGGGT---------------TGGAGGCCAGCTGGGAAAGAAGGAACCCTTGCGTTAGAGAATGGGAACA--TGCCTTAGGATATAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAaacaaggtgtgt--ct s panTro5.chr3 200036973 143 + 202621043 CTTTTGTAGGGT---------------TGGAAGCCAGCTGGGAAAGAAGGAACCCTTGCATTAGAGAATGGGAACA--TGCCTTAGGATAGAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAAACAAGGTGTGT--CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19486 143 + 190779 CTTTTGTAGGGT---------------TGGAAGCCAGCTGGGAAAGAAGGAACCCTTGCATTAGAGAATGGGAACA--TGCCTTAGGATAGAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAAACAAGGTGTGT--CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874443 143 - 880730 CTTTTGTAGGGT---------------TGGAGGCCAGCTGGGAAAGAAGGAACCCTTGCATTAGAGGATGGGAACA--TGCCTTAGGATATAGAAATGGCAAACC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAaacaaggtgtgt--ct i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795002 143 + 123690457 CTTTTGTAGGGT---------------TGGAGGCCAGCTGGGAAAGAAGGAACCATTGCATTAGAGAATGGGAACA--GGCCTTAGGATATAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAaacaaggtgtgt--ct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218334 145 + 180051392 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAACCATTGTATTAGAGAATGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTAAGAA-TACTAGAAACattctcaccaaacaaggtgtgt--ct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280459 145 - 181584905 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAGCCATTGCATTAGAGAATGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAACattctcaccaaacaaggtgtgt--ct i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42140 145 - 100774 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAACCATTGCATTAGAGAATGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAGCattctcaccaaacaaggtgtgt--ct i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 200896 145 + 218577 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAACCATTGTATTAGAGAATGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAGCattctcaccaaacaaggtgtgt--ct i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615402 145 - 91010382 CTTTTGTAGGGT---------------TGGAGGCCAGCTTTGAGAGAAGGAACCATTGCATTAGAGAATGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAACattctcaccaaacaaggtgtgt--ct i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 18933 145 - 74206 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAACCATTGTATTAGAGAATGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAGCattctcaccaaacaaggtgtgt--ct i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897285 145 + 1687011 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAACCATTGCATTAGAGAGTGGGAACA--TGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TAATAGAAGcattctcaccaaacaaggtgtgt--ct i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159466 143 - 204313951 CTTTTGTAGGGT---------------TGGAGGCCAGCTAGGAAAGAAGGAATCATTGCACTAGAGAATGGGAAGG--TGCCTTAGGATGTAGAAATGGCAAATTCATGAGATATTTTGAAGTGAGAA-TACTAGAAGCATTCCCACCAAACAAGGTGTGT---- i calJac3.chr2 I 132 C 0 s saiBol1.JH378155 121037 143 - 16417988 CTTTTGTAGGGT---------------TGGAGGCCAGCTAAGAAAGAAGGAATCATTGCACTAGAGAATGGGAAGG--TGCCTTAGGATATAGAAATGGCAAATTCATGAGATATTTTGAAGTGAGAA-TACTGGAAGCATTCCTACCAAACAAGGTGTGT---- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222465 143 + 306014 CTTTTGTAGGGT---------------TGGAGGCCAGCTGGGGAAGAAGGAATCATGGCACTAGAGAATGGGAAGG--TGCCTTAGGATATAGAAATGGCAAATTCATGAGATATTTTGAAGTGAGAA-TACTAGAAGCATTCCCACCAAACAAGGTGTGT---- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 83717 145 + 211231 CTTTTGTAGGGT---------------TGGAGGCCAGCTAGGAAAGAAGGAATCATTGCACTAGAGAATGGGAAGG--TGCCTTAGGGTATAGAAATGGCAAATCCATGAGATATTTTGAAGTGAGAA-TACTAGAAGCACTCCCACCAAACGAGGTGTGTCT-- i aotNan1.NW_018494784v1 C 0 I 280 s otoGar3.GL873745 51197 125 + 2165740 CTTCAGTA-CGT---------------CAGAGGCCAGCAAGGACAGGTGTAATCATTGCGTTTGGTAACAGGAACCTTTGTGTTAGGATGTAGATATGGCACATTCATCAGAT--TTTAGAATGGGAA-TAC---------CTCTAACAAATA------------ i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30179414 153 - 42124431 CTTTTGCAGGGTATTGATACCGGGGAATGGCCACCAGCTACGACAGATATAATCCTTGCACTATATAGTAGGAAAT--TCTATTTGGGTGTGGAAATGATGAACCCAT--GATATTTTGAAATGGGAAGTCCTAGAAACATTTCCACCAAGTAAGGC-------- i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=473148.000000 s hg38.chr3_KI270779v1_alt 49869 62 + 205312 tggtgcctgctgtatcccaggctccgtgaggtgccggagtcagcactgaacaaaca---gagctt s panTro5.chr3 200037116 62 + 202621043 TCgtgcctgctgtatcccaggctccgtgaggtgccggagtcagcactgaacaaaca---gagctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19629 62 + 190779 TCgtgcctgctgtatcccaggctccgtgaggtgccggagtcagcactgaacaaaca---gagctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874586 62 - 880730 tggtgcctgctgtatcccaggctccgtgaggtgccggagtcagcactgaacaaaga---gagctt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795145 62 + 123690457 tggtgcctgctgtatcccaggctccgtgaggtgctggagtcggcactgaacaaaca---gagctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218479 58 + 180051392 tggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaa-------agctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280604 62 - 181584905 tggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaaca---gagctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42285 62 - 100774 tggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaaca---gagctt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201041 62 + 218577 tggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaaca---gagctt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615547 56 - 91010382 tggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaaCA--------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19078 60 - 74206 tggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaaca-----gctt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897430 62 + 1687011 tggtgcctgctgtattgcaggctccgtgagatgctggagtcagcactgaacaaaca---gagctt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159609 53 - 204313951 ---------ctgtatgctaggctctgtgagatgctggagtcagcactgaacaaaca---gaagtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121180 53 - 16417988 ---------ctgtatgccaggctctgtgagatgctggcgtcagcactgaacaaaca---gaagtt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222608 53 + 306014 ---------ctgtatgccaggctctgtgagatgctagagtcagcactgaacaaaca---gaagtt i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 51322 44 + 2165740 ---------------------TACCTTGAGATGCTAGAATTAGCACTGAACAAAGACAAAAGTTC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30179567 13 - 42124431 -------------------------------------------------ACATACA---GAtctt i canFam3.chr34 C 0 I 209 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e aotNan1.NW_018494784v1 83862 280 + 211231 I a score=620791.000000 s hg38.chr3_KI270779v1_alt 49931 79 + 205312 cctatgcttgcgg-aa-atgcatttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--ATCaaaa-a s panTro5.chr3 200037178 79 + 202621043 cctaagcttgcag-aa-atgcatttcgttgggggaAGGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--ATCaaaa-a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19691 79 + 190779 cctaagcttgcag-aa-atgcatttcgttgggggaAGGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--ATCaaaa-a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874648 79 - 880730 cctatgcttgcag-aa-atgcatttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--GTCAAAA-A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795207 80 + 123690457 cctgtgcttgtgg-aa-atgcgtttcgtt-ggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGGTACATtgttggaa-a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218537 79 + 180051392 cctgtgcttgtgg-aa-atgcgttttgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAAGA--ATCAAAA-A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280666 79 - 181584905 cctgtgcttgtgg-aa-gtgcgtttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAAGA--ATCAAAA-A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42347 79 - 100774 cctgtgcttgtgg-aa-gtgcgtttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAAGA--ATCAAAA-A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201103 79 + 218577 cctgtgcttgtgg-aa-atgcgtttcgttgggggaagGGATTTTTCTGCTGACTctggctattaatagtaaga--atcaaaa-a i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615603 76 - 91010382 ---GTGCTTGTGG-AA-ATGCGTTTCGTTGGGGGGAGGGATTTTTCTGCTGACTCTAGCTATTAATAGTAAGA--ATCAAAA-A i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19138 79 - 74206 cctgtgcttgtgg-aa-atgcgtttcattggaggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAAGA--ATCaaaa-a i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897492 79 + 1687011 cctgtgctcgtgg-aa-atgtgtttctttgggggaagGGATTTTTCTGCTGACTctggctattaatagtaaga--atcaaaa-a i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159662 75 - 204313951 cccatgctcgtggaaa-atgcatttcattgg----aggaaTTTttgtgctgactctggctattaatagtaaga--attaaaa-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121233 75 - 16417988 cctgtgctcgtggaaa-atgcatttcattgg----agggaTTTTTGTGCTGACTCTGGCTATTaatagtaaga--attaaaa-- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222661 76 + 306014 cccgtgctggtggaaa-atgcatttcattgg----ggggaTTTTTGTGCTGACTCTGGCTATTAATAGTAAGA--ATTAAAAA- i cebCap1.NW_016108150v1 C 0 I 6 s otoGar3.GL873745 51366 75 + 2165740 TCAATACTTGTAG-AATATGCATACCAATGGGGAAAGTAATTTTTTTGCTGATTCTGGCTAAT-ATAGTAATG--ATGA----- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30179580 209 - 42124431 I e aotNan1.NW_018494784v1 83862 280 + 211231 I a score=58616.000000 s hg38.chr3_KI270779v1_alt 50010 10 + 205312 aagaaatgag s panTro5.chr3 200037257 10 + 202621043 aagaaatgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19770 10 + 190779 aagaaatgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874727 10 - 880730 AAGAAATGAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795287 7 + 123690457 caggccc--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218616 10 + 180051392 AAGAAATGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280745 10 - 181584905 AAGAAATGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42426 10 - 100774 AAGAAATGAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201182 10 + 218577 aagaaatgag i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615679 10 - 91010382 AAGAAATGAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19217 10 - 74206 aagaaatgag i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897571 10 + 1687011 aagaaatgag i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159737 7 - 204313951 ---acatgag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121308 7 - 16417988 ---acatgag i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 51441 10 + 2165740 AAGAAATGTG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30179580 209 - 42124431 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I a score=29643.000000 s hg38.chr3_KI270779v1_alt 50020 6 + 205312 gtaaa---t s panTro5.chr3 200037267 6 + 202621043 gtaaa---t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19780 6 + 190779 gtaaa---t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874737 6 - 880730 GTAAA---T i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795294 6 + 123690457 gtaca---t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218626 6 + 180051392 GTAAA---T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280755 6 - 181584905 GTAAA---T i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42436 9 - 100774 GTAAATTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201192 6 + 218577 gtaaa---t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615689 6 - 91010382 GTAAA---T i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19227 6 - 74206 ataaa---t i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897581 6 + 1687011 gtaaa---t i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 51451 6 + 2165740 GCATA---T i otoGar3.GL873745 C 0 I 1 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30179580 209 - 42124431 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=764001.000000 s hg38.chr3_KI270779v1_alt 50026 152 + 205312 tg-atagaaacaggcccccaaatgtggccataaactggccccaaaactggccataaacaaaatctctgcagca-tgtgacgtgctcgtgatggccaggacgaccacgcaggaaggttatgggtttaccgtaatga-gggcaaggaacacctggcc s panTro5.chr3 200037273 152 + 202621043 tg-ttagaaacaggcccccaaatgtggccataaactggccccaaaactggccataaacaaaatctctgcagca-tgtgacatgctcgtgatggccatgacgcccacgctggaaggttatgggtttaccgtaatga-gggcaaggaacacctggcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19786 152 + 190779 tg-ttagaaacaggcccccaaatgtggccataaagtggccccaaaactggccataaacaaaatctctgcagca-tgtgacatgctggtgatggccatgacgcccacgctggaaggttatgggtttaccggaatga-gggcaaggaacacctggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874743 154 - 880730 TGTttagaaacaggcccccaaatgtggccataaactggccccaaaactggccataaacaaaatctctgcagca-tgtgacatgctcgtgatggccatgacgcccatgccagaaggttgtgggtttaccgtaatgaggggcaaggaacacctggcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795300 135 + 123690457 tg-ttggaaacaggccccc------------------tccccaaaactggccataaacaaaatctctgcagcactgtgacatgctcatgatggccatgacgcccgtgccagaaggttgtgggtttaccataatga-gggcaaggaacacttggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218632 129 + 180051392 TG-TTGGGaacaggccccc------------------------aaactggccataaacaaaatctctgcagcaccatgacatactcatgatggccatgacgcccacgctggaaggttgtgggttttccggaatga-gggcaaggaacgcctggcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280761 153 - 181584905 tg-ttgggaacaggcccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgcagcactgtgacgtgctcgtgatggccatgacgcccacgctggaaggctgtcagtttactggaatga-gggcaaggaacacctggcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42445 153 - 100774 tg-ttgggaacaggcccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgcagcactgtgacgtgctcgtgatggccatgacgcccacgctggaaggttgtgggttttccggaatga-gggcaaggaacacctggcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201198 152 + 218577 tg-ttgggaataggcccccaaatctggccataaactggcccccaaactggccataaacaaaatctctgcagcgctgtgacgtgctcgtgatggccatgacgcccatgctggaagg-tgtgggttttccggaatga-gggcaaggaacacctggcc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615695 153 - 91010382 tg-ttgggaacaggcccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgcagcactgtgacatgctcgtggtggccatgacacccacgctggaaggctgtcagtttactggaatga-gggcaaggaacacctggcc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19233 153 - 74206 tg-ttgggaacaggcccccaaatctggccataaactggcccccaaactggccataaacaaaatctctgcagcgctgtgacgggctcgtgatggccatgacgcccacactggaaggttgtgggttttccggaatga-gggcaaggaacacctggcc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897587 153 + 1687011 tg-ttgggaacaggcccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgcagcaccatgacatactgttgatggccatgacgcccacactggaaggttgtgggtttaccggagtga-gggcaaggaacacctggcc i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30179580 209 - 42124431 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=561083.000000 s hg38.chr3_KI270779v1_alt 50178 107 + 205312 cacccagagtggaaaacctcttaag-------------accttcttaaaccacaaacaatagcatgagcgctctgtgccttaaggacat-------gctcctgctgcagataactagccagacccat s panTro5.chr3 200037425 107 + 202621043 cacccagagcggaaaacctcttaag-------------acgttcttaaaccacaaacaatagcatgagcaatctgtgccttaaggacat-------gctcctgctgcagataactagccagacccat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 19938 107 + 190779 cacccagagcggaaaacctcttaag-------------acgttcttaaaccacaaacaatagcatgagcgatctgtgccttaaggacat-------gctcctgctgcagataactagccagacccat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 874897 107 - 880730 cacccagagcggaaaacctcttaag-------------acgttcttaaaccacaaacaatagcatgagcgatctgtgccttaaggacat-------gctcctgctgcagataactagccagacccat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795435 120 + 123690457 cacccagagcagaaaacctcttaaggcagtcttaaaccacagtcttaaaccacaaacagtagcatgagcgatctgtgccttaaggacat-------gctcctgctgcagataactagccagacccat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218761 107 + 180051392 cacccagggtggaaaaccgcttaag-------------tgtttcttaaaccacaaacaatagcatgagcaatgtgtgccttaaggacgt-------gtgcctgctgcagataactagccagacccat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180280914 106 - 181584905 cacccagagtggaaaaccgcttaag-------------tgtttcttaaaccacaaacagtagcatgagcgatctgtg-cttaaggacgt-------gtgcctgctgcagataactagccagacccat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42598 107 - 100774 cacccagggtggaaaaccgcttaag-------------tgtttcttaaaccacaaacaatagcatgagcaatgtgtgccttaaggacgt-------gtgcctgctgcagataactagccagacccat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201350 107 + 218577 tacccagggcggaaaaccgcttaag-------------tgtttcttaaaccacagacagtagcatgagcaatgtgtgccttaaggacgt-------gttcctgctgcagataactagccagacccat i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615848 106 - 91010382 cacccagggcggaaaaccgcttaag-------------ggtttcctaaaccacaaacagtagcatgagcaatctgtg-cttaagaacat-------gttcctgctgcagataactagccagacccat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19386 107 - 74206 tacccagggcggaaaaccgcttaag-------------tgtttcttaaaccacaaacagtagcatgagcaatgtgtgccttaaggacgt-------gttcctgctgcagataactagccagacccat i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897740 106 + 1687011 cacccagggcggaaaaccacttaag-------------tgcttcttaaaccacaaacagtagcatgagcgatctgtg-cttaaggacgt-------gttcctgctgcagataactagccagacccat i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 30179789 96 - 42124431 tactcaaagtgaaaaac------aa-------------tgattgtatgagtgcagatggt-----------tgtttaccctcgggatctagtgggagctacagctgctg-ccactgcctggagtcat i canFam3.chr34 I 209 I 227 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=843086.000000 s hg38.chr3_KI270779v1_alt 50285 162 + 205312 ccctttatttcctgtaaggaatactttcagtaag-tcttatcactggcttgctgtcaataaatacgtgggtaaatctctgtttgaggcttttggctctgaaggctgtgagacccctgatttcccactccacactctatatttctgtgtgtgtgtctttacttc s panTro5.chr3 200037532 162 + 202621043 ccctttatttcctgtaaggaatacttttagtaag-tcttatcactggcttgctgtcaataaatacgtgggtaaatctctgttcaaggctcttggctctgaaggctgtgagacccctgatttcccactccacactctatatttctgtgtgtgtgtctttaattc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20045 154 + 190779 ccctttatttcctgtaaggaatacttttagtaag-tcttatcactggcttgctgtcaatatatatgtgggtaaatctctgttcaaggctcttggctctgaaggctgtgagacccctgatttcccactccacactctatatttc--------tgtctttaattc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875004 161 - 880730 ccctttatttcctgtaaggaatacttttagtaagttcttatcactggcttgctgtcaataaatacgtgggtaaatctctgttcgaggctctcggctctgaaggctgtgagatccctgattccccactccacactctatatttc--tgtgtgtgtctttaattc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795555 161 + 123690457 ccctttatttcctgtaaggaatgcttttagtaag-tcttatcactgtcttgctgtcagtaaatacgtgggtaaatctctgttcaagtctctcagctctgaaggctgtgagacccc-gatttcccactccacactctatatttctgtgtgtgtgtctttaattc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 218868 159 + 180051392 ccctttgtttcccgtaaggaatacttttagtaaa-tcttatgactggcttgctgtcagtaaatatgtgggtaaatctctgttcgaggctctcagctctgaaggctgtgagacccctgatatcccgctccacaagctattttc---tgtgtgtgtctttaattc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180281020 162 - 181584905 ccctttgtttcccgtaaggaatacttttagtaaa-tcttatgactggcttgttgtcagtaaatatgtgagtaaacctctgtttgaggctctcagctctgaaggctgtgagaccccagatttcccaccccacgcgctatatttctgtgtgtgtgtctttaattc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42705 159 - 100774 ccctttgtttcccgtaaggaatacttttagtaaa-tcttatgactggcttgctgtcagtaaatatgtgggtaaatctctgttcaaggctctcagctctgaaggctgtgagacccctgatatcccgctccacaagctattttc---tgtgtgtgtctttaattc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201457 159 + 218577 ccctttgtttcccgtaaggaatacttttagtaaa-tcttatgactggcttgctgtcagtaaatatgtgggtaaatctctgttcgaggctctcagctctgaaggctgtgagacccctgatttcccgctccacaagctattttc---tgtgtgtgtctttaattc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89615954 162 - 91010382 ccctttgtttcccataaggaatacttttagtaaa-tcttatgactggcttgttgtcagtaaatacgtgggtaaatctctgttcgaggctctcagctctgaaggctgtgagatccctgatttcccaccccacgcgctatatttctgtgtgtgtgtctttaattc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19493 162 - 74206 ccctttgtttcccgtaaggaatacttttagtaaa-tcttatgactggcttgctgtcagtaaatatgtgggtaaacctctgttcgaggctctcagctctgaaggctgtgagacccccgatttcccaccccatgcgctatatttctgtgtgtgtgtctttaattc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 897846 162 + 1687011 ccctttgtttcccgtaaggaatacttttagtaaa-tcctatgactggcttgttgtcagtaaatatgtgggtaaacctctgttggaggctctcagctctgaaggctgtgagacccccgatttcccaccccacgcgctatagttctgtgtgtgtgtctttaattc i colAng1.NW_012116910v1 C 0 C 0 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30179885 227 - 42124431 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=187569.000000 s hg38.chr3_KI270779v1_alt 50447 37 + 205312 ctctagtgccactgggtta-gggtttccatgacccagc s panTro5.chr3 200037694 37 + 202621043 ctctagtgccactgggtta-gggtttccatgacccagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20199 37 + 190779 ctctagtgccactgggtta-gggtttccatgacccagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875165 38 - 880730 ctctagtgccgctgggttaggggtttccatgacccagc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795716 37 + 123690457 ctctactgccgctgggtta-gggtttccacgacccagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219027 37 + 180051392 ctctagtgctgctgggtta-gggtctccacgatcgagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180281182 37 - 181584905 ctctagcgctgctgggtta-gggtctccacgaccaagc i macFas5.chr6 C 0 I 6467 s macNem1.NW_012013899v1 42864 37 - 100774 ctctagtgctgctgggtta-gggtctccacgatcgagt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201616 37 + 218577 ctctagtgctgctgggtta-gggtctccacaaccgagt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89616116 37 - 91010382 ctctagcgctgctgggtta-gggtctccacgaccaagc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19655 37 - 74206 ctctagcgctgctgggtta-gggtctccacaaccgagt i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898008 37 + 1687011 ctctagcgctgctgggtta-gggtctccataaccgggt i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 30180112 37 - 42124431 cacttgagttggaggaCTA-GTTTTTCTGATTTCCAGG i canFam3.chr34 I 227 C 0 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=19807.000000 s hg38.chr3_KI270779v1_alt 50484 3 + 205312 tgg s panTro5.chr3 200037731 3 + 202621043 tgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20236 3 + 190779 tgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875203 3 - 880730 tgg i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795753 3 + 123690457 tgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219064 3 + 180051392 tgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180287686 3 - 181584905 tga i macFas5.chr6 I 6467 C 0 s macNem1.NW_012013899v1 42901 3 - 100774 tgg i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201653 3 + 218577 tgg i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89616153 3 - 91010382 tgg i chlSab2.chr4 C 0 I 6359 s manLeu1.NW_012101728v1 19692 3 - 74206 tgg i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898045 3 + 1687011 tgg i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 30180149 3 - 42124431 TGA i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=37555.000000 s hg38.chr3_KI270779v1_alt 50487 8 + 205312 tcttggca s panTro5.chr3 200037734 8 + 202621043 tcttggca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20239 8 + 190779 tcttggca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875206 8 - 880730 tcttggca i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795756 8 + 123690457 tttcggca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219067 8 + 180051392 tctcggca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180287689 8 - 181584905 tctcggca i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42904 8 - 100774 tctcggca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201656 8 + 218577 tctcagca i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89622515 8 - 91010382 tctcggGA i chlSab2.chr4 I 6359 C 0 s manLeu1.NW_012101728v1 19695 8 - 74206 tctcagca i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898048 8 + 1687011 tcctggca i colAng1.NW_012116910v1 C 0 C 0 s canFam3.chr34 30180152 8 - 42124431 TACTGTGA i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e aotNan1.NW_018494784v1 83862 280 + 211231 I e cebCap1.NW_016108150v1 222737 6 + 306014 I e calJac3.chr2 159744 0 - 204313951 C e saiBol1.JH378155 121315 0 - 16417988 C a score=79640.000000 s hg38.chr3_KI270779v1_alt 50495 8 + 205312 ---gtaaatat----------- s panTro5.chr3 200037742 8 + 202621043 ---gtaaatat----------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20247 8 + 190779 ---gtaaatat----------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875214 8 - 880730 ---GTAAATAT----------- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795764 8 + 123690457 ---GTAAATAT----------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219075 8 + 180051392 ---GTAAATat----------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180287697 8 - 181584905 ---gtaaatat----------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42912 8 - 100774 ---GTAAATAT----------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201664 8 + 218577 ---gtaaatat----------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89622523 8 - 91010382 ---GTAAATat----------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19703 8 - 74206 ---gtaaatat----------- i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898056 8 + 1687011 ---gtaaatat----------- i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159744 8 - 204313951 ---gtaaatat----------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121315 8 - 16417988 ---gtaaatat----------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 222743 8 + 306014 ---GTAAATAT----------- i cebCap1.NW_016108150v1 I 6 C 0 s aotNan1.NW_018494784v1 84142 8 + 211231 ---GTAAATAT----------- i aotNan1.NW_018494784v1 I 280 C 0 s canFam3.chr34 30180160 22 - 42124431 GTGATAGAAATCAGTTACGTat i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 51457 1 + 2165740 I e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=2535668.000000 s hg38.chr3_KI270779v1_alt 50503 248 + 205312 tgaaaaggaatagatacagttgccattatttacagatataatttccaaaaaatttccagagaataaacggaaaaactaacagaaacaaaacaagaatgtagtaaggtatgtgtataagagatttgtatgtaaaaatcagtagctttgcaatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcgcatttcaaacaaaaaa-tttaaaatgccttgaaataatgtaacc---agaaatacga s panTro5.chr3 200037750 249 + 202621043 tgaaaaggaatagatacagttgccattatttacagatataatttccaaaaaatttccagagagtaaacggaaaaactaacagaaacaaaacaagaatgtagtaaggtatgtggataagagatttgtatgtaaaaatcagtagctttgcaatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCCCATTCACATTTCAAACAAAAAAATTCAAAATGCCTTGAAATAATGTAACC---AGAAATACGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20255 249 + 190779 tgaaaaggaatagatacagttgccattatttacagatataatttccaaaaaatttccagagagtaaacggaaaaactaacagaaacaaaacaagaatgtagtaaggtatgtggataagagatttgtatgtaaaaatcagtagctttgcaatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCCCATTCACATTTCAAACAAAAAAATTCAAAATGCCTTGAAATAATGTAACC---AGAAATACGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875222 240 - 880730 TGAAAAGGAATAGATACAGTTGCCATTATTTACAGATATAATTTCC-AAAAATTTCCAGAGAAT-AACGGAAAAACT------AACAAAACAAGAATGTAGTAAGGTATGTGGATAAGAGATTTGTATGTAAAAATCAGTAGCTTTGCAATGTGCCAGCAGTAATCTGCTCAGACATCAGGAAAT-ATCTCATTCACATTTCAAACAAAAAA-TTTAAAATGCCTTGAAATAATGTAACC---AGAAATACGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120795772 248 + 123690457 TGAAAAGGAATAGATACAGTTGCCATTATTTACAGATATAATTTCCAAAAAATTTCCAGAGAATAAACTGAATAACTAACAGAAACAAAACAAGAATGTagtaaggtgtctggataagagatttgtatctaaaaatcagtagctttgcaatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcacatttcaaacaaaaaa-tttaaaatgccttgaaatactgtaacc---agaaatatga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219083 247 + 180051392 tgaaaaggaatcgatacaattgctattatttacagacataatttccaaaaaattcccagagaataaactgaaaaactaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttgtatctaaaaattagtagctttgcgatgtgccagcagtaaTCTGCTTAGACATCAGTAAAT-ATCTCATTCACATTTCAAACAAAAAA-TTAAAAATGCCTTGAAATAATGTAACC---AGAAATAC-A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180287705 247 - 181584905 tgaaaaggaatcaatacaattgctattatttacagatgtaatttccaaaaaattcccagagaataaactgaaaaattaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttgtatctaaaaatcagtagctttgcaatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCTCATTCACATTTTAAACAAAAAA-TTAAAAATGCCTTGAAATAATGTAACC---AGAAATAC-A i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 42920 247 - 100774 TGAAAAGGAATCGATACAATTGCTATTATTTACAGACATAATTTCCAAAAAATTCCCAGCGAATAAACTGAAAAACTAACAGAAACAAAACAAGAATGCAGTAAGGTGTCTGGATAAGAGATTTGTATCTAAAAATTAGTAGCTTTGCGATGTGCCAGCAGTAATCTGCTTAGACATCAGTAAAT-ATCTCATTCACATTTCAAACAAAAAA-TTAAAAATGCCTTGAAATAATGTAACC---AGAAATAC-A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201672 247 + 218577 tgaaaaggaatagataaaattgctatcatttacagacataatttccaaaaaattcccagagaataaactgaaaaactaacagaaacaaaacaagaatgcagtaaggtgtctagataagagatttgtatctaaaaatcagtagctttgcgatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCTCATTCACATTTCAAACAAAAAA-TTAAAAATGCCTTGAAATAATGTAACC---AGAAATAC-A i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89622531 247 - 91010382 tgaaaaggaatcaatacaattgctattatttacagatgtaatttccaaaaaattcccagagaataaactgaaaaattaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttatatctaaaaatcagtagctttgtgatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcacattttaaacaaaaaa-ttaaaaatgccttgaaataatgtaacc---agaaatac-a i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19711 247 - 74206 tgaaaaggaatagataaaattgctatcatttacagacataatttccaaaaaattcccagagaataaactgaaaaactaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttgtatctaaaaatcagtagctttgcgatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCTCATTCACATTTTAAACAAAAAA-TTAAAAATGCCTTGAAATAATGTAACC---AGAAATAC-A i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898064 247 + 1687011 tgaaaaggaatcgataaaattgctgttattcacagacataatttccaaaaaattcccagagaataaactgaaaaactaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttgtatctaaaaatcagtagctttgcaatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcacatttcaaacaaaaac-tgtaaaatgccttgaaataatgtaacc---agaaatac-a i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 159752 247 - 204313951 tgaaaaggaatagatataattgctattatttacagacacaatttccaaaaagttcccagagaataaattgaaaaactaatagaaacaaaagaaggatgtaggtaggtgtctggatgaaaggtttgtagctaaacctcagtagcttttcaatgtgccagcaggaatccgctcagacgtcagtaaat-atctcattcacctttcagacaaaaaa-caaaaaatgccttgaataaatataacc---agaaatac-g i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 121323 247 - 16417988 tgaaaaggaatagatataattgccattatttacagacacaatttccaaaaagttcccagagaataaactgaaaaactaatagaaacacaataaggatgtagttaggtgtctggatgagaagtttgtaggtaaatgtcagtagcttttcagtgtgccagcaGGAATCCACTCAGACGTCAGTAAAT-ACCTCATTCACCTTTCAGACAAAATA-CAAAAAATGCCTTGAATAAATGTAACT---AGAAATAT-G i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 222751 247 + 306014 TGAAAAGGAATAGATATAATTGCCATTATTTACAGACACAATTTCCAAAAAGTTCCTAGAGAATAAACTGAAAAACTAATAGAAACAAAATAAGTATGTAGTTAGGTGTCTGGATGAGAGGCTTGTAGCTAAACGCCAGTAACTTTTCAGTGTGACAGCAGTAATCCTCTCAGACATCAGTAAAT-ATCTCATTCACCTTTCAGACAAAAAA-TAAAAAATGCCTTGAATAAATGTAACT---AGAAATAC-C i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 84150 243 + 211231 TGAAAAGGAATAGATATAATCGCCATTATTTACAGACACAATTTCCAAAAAGTTCCCAGAGAATAAACTGAAAAACTAATAGAAACAAAACAAGGATGTAGCTACGTGTCTGGACGAGAGGTTTGTAGC-AGGCGTCAGTAGCTTTTCAGCGTGCCAGCGGTGAGCTGCTCAGACGTCAGT-AAT-GTCTCATTCACCTTTCAGACAAAAAA-C--AAAATGCCTTGAataaatataacc---agaaatat-a i aotNan1.NW_018494784v1 C 0 I 36 s otoGar3.GL873745 51458 242 + 2165740 TGGAAAATAATAGGtaatatt---attatttataaatatGCTTTCCTAAAAATTTCATGAGAATAAACTGAAAAACTAATAGAAATAGTGGAAAAATGTAGTGAAGTGCCTTGATATAAGACTTATATGAAAAAATGAGTAACTTTTCAGTGTGGCAG-GGTTATCCAGTCAGAGAACAATAAAC-ATCTCATTCACATTATAGTAATAACA-T--GAAATGCCTTGAACAAACTTAACC---AGAAACATTA i otoGar3.GL873745 I 1 C 0 s canFam3.chr34 30180182 218 - 42124431 tgaaaaggagtgg--acaagtatcattacttacagatacaatt----aaaaatctcaaggcaataag-tgagaaactcata-----aaaacaagaatg----gagatatctgtataaaagattcaaa----------agtagctttccaacatgcctgcaataatc--------cattagaaaatcatctcattcacagtgcagaccaaaag-tttaaaatgccttgaataaacctaaccctaaagagtatga i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=244827.000000 s hg38.chr3_KI270779v1_alt 50751 36 + 205312 aaagatgatatgaaaacgtcgctgcta---aaggacatg s panTro5.chr3 200037999 36 + 202621043 AAAGATGATACGAAAACATCGCTGCTA---AAGGACATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20504 36 + 190779 AAAGATGATACGAAAACATCGCTGCTA---AAGGACATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875462 36 - 880730 AAAGATGATACGAAAACGTCGGTGCTA---AAGGACATG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796020 36 + 123690457 aaaaATGATATGAAAACGTGGCTGCTA---AAGGACATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219330 36 + 180051392 AGAAAGGATATGAAAACGTGGCTGCTA---AAGGACGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180287952 36 - 181584905 AGAAAGGATATGAAAACGTGGCTGCTA---AAGGACATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 43167 36 - 100774 AGAAAGGATATGAAAACGTGGCTGCTA---AAGGACATG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201919 36 + 218577 AGAAAGGATATGAAAACGTGGCTGCTA---AAGGACATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89622778 36 - 91010382 agaAAGGATATGAAAACGTGGCTGCTA---AAGGACATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19958 36 - 74206 AGAAAGGATATGAAAACGTGGCTGCTA---AAGGACATG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898311 36 + 1687011 agaAAGGATATGAAAACGTGGCTGCTA---AAGGACATG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160000 34 - 204313951 aaaacagatatG-AAACATC-CTGCTA---AAGTGTGTT i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 121571 34 - 16417988 AAAACAGATATG-AAGCATC-CTGCTA---AAGGATGTG i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 222999 34 + 306014 AAAACAGATATG-AAACATC-CTGCTA---AAGAATGTG i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 51700 38 + 2165740 -AAATTGATAAGAAAAAATATTTGACAACTAAGGATGGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30180400 23 - 42124431 -------------aaagatgagcactg---aagaatata i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e aotNan1.NW_018494784v1 84393 36 + 211231 I a score=1148298.000000 s hg38.chr3_KI270779v1_alt 50787 108 + 205312 aaagaATGT-------AAT-----ACTAGATTCTGAGATGCAAT-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTTACGATTATGTATGAGTCTAAGG s panTro5.chr3 200038035 108 + 202621043 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAT-TTTTTTCGTTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTTACGATTATGTATGAGTCTAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20540 108 + 190779 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAT-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTTACGATTATGTATGAGTCTAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875498 108 - 880730 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAT-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAATGTTACGATTATGTATGAGTCTAAGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796056 108 + 123690457 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAGT-TTTTTTCATTTGTTCTTCCTGAAAAACCATGAGGT----TGATGTGCATTACAGTGTTCCAATTATGTATGAGCCTAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219366 108 + 180051392 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCCAAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180287988 108 - 181584905 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 43203 108 - 100774 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTCATGATTATGTATGAGTCCAAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 201955 108 + 218577 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89622814 108 - 91010382 AAAGAATGT-------AAT-----ACTAGATTTTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 19994 108 - 74206 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898347 108 + 1687011 AAAGAATGT-------AAT-----ACTAGATTCTGAGATGCAAC-TTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160034 111 - 204313951 TAAGAATGT-------GATACTT-ACTGCCTTCTAAGATGCAA--GTGTTGCGTTTGTTCTTCCTGAAGAACCATTAGGT----TGATGTGCATTACCGTGTTACAGTTATGTGTCAGTCTAAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121605 111 - 16417988 AAAGAATGT-------GAAACTT-ACTACATTCTAAGATGCAG--TTTTTTCATTTGTTCTTCCTGAAAAACCACTAGGT----TGATGTGCATTACAGTGTTACAGTTATGTATCAGTCTAAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223033 112 + 306014 AAAGAATGT-------GATACTTAACTACATTCTAAGATGCAG--TTTTTTCATTTGTTCTTCCTGAAAAACCAATAGGT----TGATGTGCATTACAGTGTTACAATTATGTATCAGTCTAAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 84429 110 + 211231 AAAGAATGT-------GACACTT-AC-ACGTTCTAAGATGCAA--TCTTTTCATCTGTTCTTCCTGAAAAACCATTAGGT----GGATGTGCATTACAGTGTTACAATTATGTATCAGTCTAAGG i aotNan1.NW_018494784v1 I 36 C 0 s otoGar3.GL873745 51738 117 + 2165740 AAAGAATGTT-----CAGTGTTT-TCTAGATTCTAAGATACAATATTTTTCCATTTATTCTTCCTTAAAAACCATTAAGT-TGATGATGTACATTACACTTTTACAATTATGTATT-GTCTAATG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30180423 121 - 42124431 aaagaatgttTTAACTAACATTT-ACTAGATTCTAAGAT--AGT-TTTTTCCATTTCCTTATCCTGAAAGGCCAGAACATTTGATAGCGTGCATTACAATTTTAAACTTATGTATCATTGTgggg i canFam3.chr34 C 0 I 3374 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I a score=1728046.000000 s hg38.chr3_KI270779v1_alt 50895 179 + 205312 AAAATCAGATGAAATG--TCCAAATTGAACCACGAAGGTGCATTGGTAGAGGAAGAGACAATTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGCCTGTGTGTCCCACAGGAAGCAAAAGCTGATGCCCAGTTCCCAGCATACCTA s panTro5.chr3 200038143 179 + 202621043 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAGACAATTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTACCTGTGTGTCCCACAGGAAGCAAAAGCTGATGCCCAGTTCCCAGCATACCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20648 179 + 190779 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAGACAATTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGCCTGTGTGTCCCACAGGAAGCAAAAGCTGATGCCCAGTTCCCAGCATACCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875606 178 - 880730 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCGTCGGTAGAGGAAGAGACAATTAGTGTCAGTGGGGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGCCTGTGTGTCCCACAGGAAGC-AAAGCTGATGCCCAGTTCCCAGCATACCTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796164 179 + 123690457 AGAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAGACAGTTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTACCTGTCTGTCCCACAGGAAGCAAAAGCTGACACCCAGTTCCCAGCATACCTA i nomLeu3.chr11 C 0 I 1 s rheMac8.chr6 219474 179 + 180051392 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAAGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGCCCCACAGGAAGCAAAAGCTGACGCCCGGTTGCCAGCACACCTA i rheMac8.chr6 C 0 I 1 s macFas5.chr6 180288096 179 - 181584905 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCAGTTGCCAGCACACCTA i macFas5.chr6 C 0 I 3493 s macNem1.NW_012013899v1 43311 179 - 100774 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAAGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCGGTTGCCAGCACACCTA i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 202063 179 + 218577 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCGGTTGCCAGCACACCTA i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 89622922 179 - 91010382 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAAACAATTAGGGTCAGGGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGTCTGTCTGTCCCACAGGAAGCAACAGCTGACGCCCGGTTGCCAGCACACCTA i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 20102 179 - 74206 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCGGTTGCCAGCACACCTA i manLeu1.NW_012101728v1 C 0 I 1 s colAng1.NW_012116910v1 898455 179 + 1687011 AAAATCAGATGAAATG--TCCAAATTAAACCATGAAGCTGCATTGGTAGAGGAAGAGACAATTAGGGTCAGTAGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAAGGATCACGGAGGTTTTGCCTCTCTGTCCCACAGGAAGCAAAAGCTGACGCCCGGTTCCCAGCACACCTA i colAng1.NW_012116910v1 C 0 I 1 s calJac3.chr2 160145 172 - 204313951 GAAATCAG---------------ATTCAACCATGAAGCTGCATTTGCAGAGGAAGAGACAATTAGGGTCAGAGGAACAAAGCAGAGTTAGAGGGAGAAGCGAGGAGGAGGAGGAGGAGGGATCAGGGAAGTGGTGCCCCTCCGTCCCACAGGAAGCAAACGCTGACACCTAGTTCCCAGCATACCTA i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 121716 179 - 16417988 AAAATCAGATGAAATG--TTCAAATTAAACCACGAAGGTGCATTTGCAGAGGAGGAGACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------GAGGAGGAGGTGGGGTCGGGGAAGTGGTGCCTGTCCGTCCCACAGGAAGCAAACACCGACACCCAGTTCCCAGCGTACCTC i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 223145 179 + 306014 AAAATCAGATGAAATG--TTCAAATTAAACCATGAAGGTGCATTTGCAGAGGAGGAGACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------CAGGAGGAGGAGGGGTCGGGGAAGTGGTGCCTGTCCATCCCATAGGAAGCAAACACTGACACCCAGTTCCCAGCATACCTA i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 84539 182 + 211231 AAAATCAGATGAAATG--TTCAAATTAAACCGTGAAGGTGCATTTGCAGAGGAGGAGACAGTTAGGGTCCGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC---CAGGAGGAGGAGGAGGGATCGGGGAGGTGGTGCCTGTCCGTCCCACAGGAAGCAAACACTGACACCCAGTTCCCAGCACACCTA i aotNan1.NW_018494784v1 C 0 I 23 s otoGar3.GL873745 51855 87 + 2165740 AAAATTAGATGAAGTGCCCCCAAAT----------------GTTGGTAGAGGAAGAGGTATTCAG-GTCAGCAGAACATAGCAGAG-----GCCAGAGAT------AAGGGG-----------------------------------------------------------------------CCT- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30180544 3374 - 42124431 I a score=139117.000000 s hg38.chr3_KI270779v1_alt 51074 21 + 205312 AGTAAACTTCAGGTCCACT-CC s panTro5.chr3 200038322 21 + 202621043 AGTAAACTTCAGGTCCACT-CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20827 21 + 190779 AGTAAACTTCAGGTCCACT-CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875784 22 - 880730 AGTAAACTTCAGGTCCACTACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796344 22 + 123690457 AGTAAACTTCAGGTCCACTGCA i nomLeu3.chr11 I 1 C 0 s rheMac8.chr6 219654 22 + 180051392 AGTAAACTTCAGGTCCACTGCA i rheMac8.chr6 I 1 C 0 s macFas5.chr6 180291768 22 - 181584905 AGTAAACTTCAGGTCCACTGCA i macFas5.chr6 I 3493 C 0 s macNem1.NW_012013899v1 43491 22 - 100774 AGTAAACTTCAGGTCCACTGCA i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 202243 22 + 218577 AGTAAACTTCAGGTCCACTGCA i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 89623102 22 - 91010382 AGTAAACTTCGGGTCCACTGCA i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 20282 22 - 74206 AGTAAACTTCAGGTCCACTGCA i manLeu1.NW_012101728v1 I 1 C 0 s colAng1.NW_012116910v1 898635 22 + 1687011 AGTAAACTTCAGGTCCACTGCA i colAng1.NW_012116910v1 I 1 C 0 s calJac3.chr2 160318 22 - 204313951 AAAAAACTTCAGATCTGCCTAC i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 121896 22 - 16417988 AAAAAACTTCAGGTCTGCCTCA i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 223325 22 + 306014 AAAAAACTTCAGGTCTGCCTCA i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 51942 7 + 2165740 -------------TCCGCAC-- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30180544 3374 - 42124431 I e aotNan1.NW_018494784v1 84721 23 + 211231 I a score=305275.000000 s hg38.chr3_KI270779v1_alt 51095 43 + 205312 TAGCAC------------------------------------------GTTTCTCGTGATAGTAAAACTATGAAGGAACTCAGTG s panTro5.chr3 200038343 43 + 202621043 TAGCAC------------------------------------------GTTTCTCGTGATAGTAAAACTATGAAGGAACTCAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20848 43 + 190779 TAGCAC------------------------------------------GTTTCTCATGATAGTAAAACTATGAAGGAACTCAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875806 43 - 880730 TAGCAC------------------------------------------GTTTCTCGTGATAGTAAAACTATGAAGGAACTCAGTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796366 43 + 123690457 TAGCAC------------------------------------------GTTTCTCACCACAGTAAAACTATGAAGGAACTCAGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219676 43 + 180051392 TGGCAC------------------------------------------GTTTCTCGCCACAGTAAAACTATGAAGGAAGTCAGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180291790 43 - 181584905 TGGCAC------------------------------------------GTTTCTTGCCACAGTAAAACTATGAAGGAAGTCAGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 43513 43 - 100774 TGGCAC------------------------------------------GTTTCTTGTCCCAGTAAAACTATGAAGGAAGTCAGTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 202265 43 + 218577 TGGCAC------------------------------------------GTTTCTCGCCACAGTAAAACTATGAAGGAAGTCAGTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623124 43 - 91010382 TGGCAC------------------------------------------GTTTCTCGCCACAGTAAAACTATGAAAGAAGTCAGTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 20304 43 - 74206 TGGCAC------------------------------------------GTTTCTCGCCACAGTAAAACTATGAAGGAAGTCAGTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 898657 43 + 1687011 TGGCAC------------------------------------------GTTTCTTGCCACCGTAAAACTACGAAGGAAGTCAGTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160340 85 - 204313951 AAACATTTCATCCAGCCACGTACCTACACCCTTATTTTGTTTCTCTTAGTTCCTCATCACTGTAAAACTGTGATGGACCCCAGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121918 43 - 16417988 TAGCAC------------------------------------------GCTCCTCATCACCGTGAAACTGTGACGGACCCCAGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223347 43 + 306014 TAGCAC------------------------------------------ATTCCTCATCACCGTAAAACTGTGATGGACCCCAGTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 84744 43 + 211231 TGGCAC------------------------------------------GTTCCTCATCACTGTAAAACTGTGATGGACCCCAGTG i aotNan1.NW_018494784v1 I 23 C 0 s otoGar3.GL873745 51949 6 + 2165740 -------------------------------------------------------------GTAAGA------------------ i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 553658 4936 + 913073 I e canFam3.chr34 30180544 3374 - 42124431 I a score=573144.000000 s hg38.chr3_KI270779v1_alt 51138 56 + 205312 TACAAGGAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC s panTro5.chr3 200038386 56 + 202621043 TACAAGGAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20891 56 + 190779 TACAAGGAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875849 55 - 880730 TAGAAGGAGCTTCTAC--AATAGGCAGAAAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796409 56 + 123690457 TACAAGGAGCTTCTACAAAATAGGCAA-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219719 56 + 180051392 TATAAGAAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180291833 56 - 181584905 TATAAGAAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 43556 56 - 100774 TATAAGAAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 202308 56 + 218577 TATAAGAAGCTTTTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623167 56 - 91010382 TACAAGAAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 20347 56 - 74206 TACAAGAAGCTTCCAGAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i manLeu1.NW_012101728v1 C 0 M 4520 s colAng1.NW_012116910v1 898700 56 + 1687011 TACAAGAAGCTTCTACAAAATAGGCAG-AAGA-CAGTAGCC-------AGATGGGCCAAGGGCCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160425 56 - 204313951 TACGAGGAGCCTTTGCAAAACAGGCCG-AAGA-CAGTAGCT-------AGATGGGCCAAGGGTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 121961 56 - 16417988 TACGAGGAACTTTTGCAAAACAGGCCG-AAGA-CAGTAGCT-------AGATGGGCCACAGGTCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223390 56 + 306014 TACGAGGAGCTTTTGCAAAACAGGCAG-AAGA-CAGTAGCT-------AGATGGGCCAAAGGTCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 84787 56 + 211231 TACGAGGAGCTTTTGCCAAACAGGCCG-AAGA-CAGTAGCT-------AGATGGGCCAAGGGTCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 51955 36 + 2165740 ---AAGAGGTTTCT----------CAA-GAGT-CAGAGGCT--------------TCCCAGGCCC i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 558594 64 + 913073 tatgaggaccttctacagaatcaccag-aagaccagtagccatttaggaaatgggcaaagggctG i dasNov3.JH577625 I 4936 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30180544 3374 - 42124431 I a score=1003305.000000 s hg38.chr3_KI270779v1_alt 51194 141 + 205312 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCCTTGAAGACCTTCGGTTCCAACCCCACC--ATCAGCAGGGC-TCTGCTCA-----GT---TCCTCCTTGTGTGTATCACCA--CAGGGC---TGCTGGCTCGTGTCACGTTCACCACCA-------GACCCCACATCAGG s panTro5.chr3 200038442 141 + 202621043 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCCTTGAAGACCTTCGGTTCCAACCCCACC--ATCAGCAGGGC-TCTGCTCA-----GT---TCCTCCTTGTGTGTATCACCA--CAGGGC---TGCTGGCTCGTGTCACGTTGACCACCA-------GACCCCACGTCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 20947 141 + 190779 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCCTTGAAGACCTTCGGTTCCAACCCCACC--ATCAGCAGGGC-TCTGCTCA-----GT---TCCTCCTTGTGTGTATCACCA--CAGGGC---TGCTGGCTCGTGTCACGTTGACCACCA-------GACCCCACGTCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 875904 141 - 880730 ---CAGCCA----CCCATGCCCCT-----------CCCTCTCCTTGAAGACCTTCGCTTCCAACCCCACC--ATCAGCAGGGC-TCTGCTCA-----GT---TCCTCCTTGTGTGTATCACCA--CGGGGC---TGCTGGCTCGTGTCGCGTTGACCACCA-------GACCCCACATCAGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796465 141 + 123690457 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCCTTGAAGACCTTCCGCTCCAACCCCACC--ATCAGCAGGGC-TCTGCTCA-----GC---TCCTCCTAGTGTGTATCACCA--CAGGGC---TGCTGGCTCGTGTCACGTTGACCACCA-------GACCCCATGTCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219775 141 + 180051392 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCACTGAAGACCTTTGGCTCCAACCCCACC--ATCACCAGGGC-TCTGCTCA-----GC---TCCTCCTAGTGTGTGTCACCA--CAGGGC---TGCTGGCTTGTGTCACGTTCACCACCA-------GACCCCACGTCAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180291889 141 - 181584905 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCACTGAAGACCTTTGGCTCCAACCCCACC--ATCACCAGGGC-TCTGCTCA-----GC---TCCTCCTAGTGTGTGTCACCA--CAGGGC---TGCTGGCTTGTGTCACGTTCACCACCA-------GACCCCACGTCAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 43612 141 - 100774 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCACTGAAGACCTTTGGCTCCAACCCCACC--ATCACCAGGGC-TCTGCTCA-----GC---TCCTCCTAGTGTGTGTCACCA--CAGGGC---TGCTGGCTTGTGTCACGTTCACCACCA-------GACCCCACGTCAGG i macNem1.NW_012013899v1 C 0 M 1620 s cerAty1.NW_012004452v1 202364 141 + 218577 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCACTGAAGACCTTCGGCTCCAACCCCACC--ATCACCAGGGC-TCTGCTCA-----GG---TCCTCCTAGTGTGTGTCACCA--CAGGGC---TGCTGGCTTGTGTCACGTTCACCACCA-------GACCCCACGTCAGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623223 141 - 91010382 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCACTAAAGACCTTCGGCTCCAACCCCACT--ATCACCAGGGC-TCTGCTCA-----GC---TCCTCCTAGTTTGTGTCACCA--CAGGGC---TGCTTTCTTGTGTCACGTTCACCACCA-------GACCCCACGTCAGG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 898756 141 + 1687011 ---CAGCCA----CCCACGCCCCT-----------CCCTCTCACTGAAGACCTTCCGCTCCAACCCCACC--ATCACCAGGAC-TCTGCTCA-----GC---TCCCCCTAGTGTGTGTCACCA--CAGGGC---TGCTGGCCTGTGTCACGTTCACCACCA-------GACCCCACGTCAGG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160481 118 - 204313951 ---CAGCCA----CCCACG-CCCT-----------CCCTCTCCTTGAAGACCTTTGGCTCCTACACCACC--ATCATCAGCAC-CCTGCTCA-----G------CTCCTAGTGTGTATCACCA------------------------CACATTCACCACCA-------GACCCCACGTCAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122017 118 - 16417988 ---CAGCCA----CCCACG-CCCT-----------CCCTCTCCTCAAAGACCTTTGGCTCCTACACCACC--ATCATCAGCAC-CCTGCTCA-----G------CTCCTAGTGTGTATCACCA------------------------CACATTTACCACCA-------GACCCCACGTCAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223446 118 + 306014 ---CAACCA----CCCACG-CCCT-----------CCCTCTCCTCGAAGACCTTTGGCTCCTACACCACC--ATCAGCAGCAC-TCTGCTCA-----G------CTCCTAGTGTGTATCACCA------------------------CACATTCACCACCA-------GACCTCACGTCAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 84843 116 + 211231 ---CAGCCA----CCCACG-CCCT-----------CCCTCTCCTTGAAGACCTTTGGCTCCTGCACCACC--ATCATCAGCA---CTGCCCA-----G------CTCCTAGTGTGCATCACCA------------------------CACATTCACCACCA-------GACCCCACGTCAGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 51991 127 + 2165740 ---------------CTGACTTTT-----------CCCACTCCTTGATGACCTACTGTTTCTGCACTA-----------------CTGCTCATCCATGT---ATCATTTGGGCAGTGTCACTGGGCAGAGC-TGTGCTGGTTCACGTCACATT-ACCACCA-------GACCGCTTACCAGG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 558658 172 + 913073 CAGCAGCAGGGGTCCTGGGCCCCTTTCTTCTCTTCCCTCTTCGTCCATGGCCTCCCCTTTCGGCACCTACTGCTCACCACTGCATTAACTCA-----GCATTTCCTCTTTGTAT---TAACCA--GAGGAGATGTGCTGGCTCCTTTAGCATTTACCGCCGACCACGTGCCCCTGCCCCAGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30180544 3374 - 42124431 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=674133.000000 s hg38.chr3_KI270779v1_alt 51335 113 + 205312 AGTCCCG--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGT-GCTGCCTGGTTGGCCGTGGAGCCGTATG--------GAACGTGGTGCCTCACA----GGCAGTCTGCTTGGCGTCCTGGACCCTGGCTGTATCC------CGC s panTro5.chr3 200038583 113 + 202621043 AGTCCCG--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGC-GCTGCCTGGTTGGCCGCGGAGCCCTATG--------GAACGTGGTGCCTCACA----GGCAGTCTGCTTGGCGTCCTGGACCCTGGCTGTATCC------CGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21088 113 + 190779 AGTCCCG--------------------CCA-----GG--------------GG-GGT-GGGG-------------------AGGCAGC-GCTGCCTGGTTGGCCGCGGAGCCGTATG--------GAACGTGGTGCCTCACA----GGCAGTCTGCTTGGCGTCCTGGACCCTGGCTGTATCC------CGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876045 113 - 880730 AGTCCCG--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGC-GCTGCCTGGTTGGCCGCGGAGCCGTATG--------GAACGTGGTGCCTCACA----GGCAGTCTGCTTGGCGTCCTGGACCCTGGCTGTATCC------CAC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796606 114 + 123690457 AGTCCCA--------------------CCA-----GG--------------GGTTGT-GGGG-------------------AGGCAGC-GCTGCCTGGTTGGCCACTGAGCCGTATG--------GAACATGGTGCCTCACA----GGCAGTCTGCTTGGAGTCCTGGACCCCGGCTGTATCC------CGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 219916 113 + 180051392 AGTCCCG--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGC-ACTGCCTGGTTGGCCACGGAGCCATGTG--------GAACATGGTACCTCACA----GGCAGTCTGCTTGGAGTCCTGGACCCTGGCTGTATCC------CAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292030 113 - 181584905 AGTCCCG--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGC-ACTGCCTGGTTGGCCGCAGAGCCATGTG--------GAACATGGTACCTCACA----GGCAGTCTGCTTGGAGTCCTGGACCCTGGCTGTATCC------CAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202505 113 + 218577 AGTCCCG--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGC-GTTTCCTGCTTGGCCGCAGAGCCATGTG--------GAACATGATGCCTCACA----GGCAGTCTGCTTGGAGTCCTGGAGCCTGGCTGTATCC------CAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623364 114 - 91010382 AGTCCCG--------------------CCA-----GG--------------GG-TGTGGGGG-------------------AGGCAGC-ATTGCCTGGTTGGCCGCGGAGCCATGTG--------GAACATGGTGCCTCACA----GGCAGTCTGCTTGGAGTCCTGGAGCCTGGCTGTATCC------CAC i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 898897 113 + 1687011 AGCCCCT--------------------CCA-----GG--------------GG-TGT-GGGG-------------------AGGCAGC-GTTGCCTGCTTGGCTGCGGAGCCATGTG--------GAACGTGGTGCCTCAGA----GGCAGTCTGCTTGGAGTCCTGGACCCTGGCTGTATCC------CAC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160599 111 - 204313951 AGTCCCATCTGGTCCCGTGTCC----ACCA-----GG--------------GG-TGT--GGG-------------------AGGGGGT-GCTGGCTGGCTGGCCGCAGAGCCATATG--------GAACATGGCACCTCACA----GGCAGTCTG-----------------TGGCTGTATCC------CGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122135 112 - 16417988 AGTCCCGTGTGGTCCTGTGTCC----ACCA-----GG--------------GG-TGT-GGGG-------------------AGCGGGT-GCTGCCTGGCTGGCCGCAGAGCCTTATG--------GAACATGGCACCTCACA----GGCAGTCTG-----------------TAGCTGTGTCC------CAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223564 112 + 306014 AGTCCCGTCTGGTCCAGTGTCC----ACCA-----GG--------------GG-TGT-GGGG-------------------AGGGGGT-GCTGCCTGGCTGGCCACAGAGCCACATG--------GAACATGGCACCTCACA----GGCAGTCTG-----------------TGGCTGTATCC------CGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 84959 112 + 211231 AGTCCCGTCTGGTCCCGTGTCC----ACCA-----GG--------------GG-TGT-GGGG-------------------AAGGGGT-GCTGCCTGGCTGGCCGCAGAGCCATGTG--------GAACGTGGCACCTCACA----GGCGGTCTG-----------------TGGCTGTATCC------TGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52118 127 + 2165740 ----------TGACCTATGGCCCA-TACCA-----GGCAGCTCATTTGTCCAG-GGC-TTGG-------------------AGATGAC-ACTGCCTGGTT---------------CA--------GAGCATTGTGCCTCACA----AGAAGTCTGCTTAGAACCACAGACACTGGCTTTGTTCCTCAAACTC i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 558830 159 + 913073 -----------GACCGCTGCCCGGCTCTCATGAGCGG--------------GC-CGT-GGGGCTTGGTGCCCGAGGCCTGCAGGTAGCAGTTTCCCAGTTGCCTGTGGAGGTGTATGCCCTTTCTGCCTCCAGTTTCTCATACTTCAGAAGTTAGCATGGAATTATCTATCCTGACTGTGTTC------CAC i dasNov3.JH577625 C 0 I 76 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30180544 3374 - 42124431 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=190437.000000 s hg38.chr3_KI270779v1_alt 51448 25 + 205312 TGGAAAGGATGTGTGTGGGTC-----TAAG s panTro5.chr3 200038696 25 + 202621043 TGGAAAGGATGTGTGTGGGTC-----TAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21201 22 + 190779 TGGAA---ATGTGTGTGGGTC-----TAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876158 25 - 880730 TGGAAAGGATGTGTGTAGGTC-----TAAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796720 25 + 123690457 TGGAAAGGATGTGTGTGGGTC-----TAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220029 25 + 180051392 TGGAAAGGATGTGTCTGGGTC-----TAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292143 25 - 181584905 TGGAAAGGATGTGTCTGGGTC-----TAAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202618 25 + 218577 TGGAAAGGATGTGTCTGGGTC-----TAAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623478 25 - 91010382 TGGAAAGGATGTGTCTGGGTC-----TAAG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 899010 25 + 1687011 TGGAAAGGATGTGTCTGGGTC-----TAAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160710 25 - 204313951 TGGAAAGCATGCATGTGGGTC-----TAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122247 25 - 16417988 TGGAAAACACGTGTGTGGGTC-----TAAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223676 25 + 306014 TGGAAAGCATGTGTGTGGGTC-----TAAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85071 25 + 211231 TGGAAAGCATGTATGTGGGTC-----TAAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52245 30 + 2165740 TGTAAATGATGTATGTGGACCTGTGTTAAG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e dasNov3.JH577625 558989 76 + 913073 I e canFam3.chr34 30180544 3374 - 42124431 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=127914.000000 s hg38.chr3_KI270779v1_alt 51473 24 + 205312 ATATGTATATAATAGAAAC----A--------TTTA s panTro5.chr3 200038721 24 + 202621043 ATGTGTATATAATAGAAAC----A--------CTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21223 24 + 190779 ATGTGTATATAATAGAAAC----A--------TTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876183 24 - 880730 ATATGTATATAATAGAAAC----A--------TTTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796745 28 + 123690457 ATATGTATGTAATAGAAACATTTA--------TTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220054 23 + 180051392 ATGTGTATGTAATAGAAAC----A---------GTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292168 23 - 181584905 ATGTGTATGTAATAGAAAC----A---------GTA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202643 24 + 218577 ATGTGTATGTAATAGAAAC----A--------TGTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623503 24 - 91010382 ATGTGTATGTAACAGAAAC----A--------TGTA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 899035 24 + 1687011 ATGTGTATGTAATAGAAAC----A--------TCTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160735 22 - 204313951 ACGTGTAGTTAATAGAAAC----A----------TT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122272 22 - 16417988 ATGTGTAGTTAATAGAAAC----A----------TT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223701 22 + 306014 ATGTGTAGTTAATAGAAGC----A----------TT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85096 22 + 211231 ATGTGCAGTTAATAGAAAC----A----------TT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52275 32 + 2165740 ACATACATGTAGCAGAAAC----AGAAAAAGCTTTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46094097 24 - 120421639 ATGCATATATAATAAGACC----C--------TTTC i mm10.chr13 I 746 C 0 e dasNov3.JH577625 558989 76 + 913073 I e canFam3.chr34 30180544 3374 - 42124431 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=66954.000000 s hg38.chr3_KI270779v1_alt 51497 15 + 205312 TTCAGA--------------------------------------------------------AGCTTTAGT s panTro5.chr3 200038745 15 + 202621043 TTCAGA--------------------------------------------------------AGCTTTAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21247 15 + 190779 TTCAGA--------------------------------------------------------AGCTTTAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876207 15 - 880730 TTCAGA--------------------------------------------------------AGCTTTAGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796773 15 + 123690457 TTCAGA--------------------------------------------------------AGCTTTAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220077 15 + 180051392 TTCAGA--------------------------------------------------------AGCTTTAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292191 15 - 181584905 TTCAGA--------------------------------------------------------AGCTTTAGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202667 15 + 218577 TTCAGA--------------------------------------------------------AGCTTTAGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623527 14 - 91010382 TTCAG---------------------------------------------------------AGCTTTAGT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 899059 15 + 1687011 TTCAGA--------------------------------------------------------AGCTTTAGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160757 15 - 204313951 TTCAGA--------------------------------------------------------AGCGTTAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122294 12 - 16417988 TTCAGA--------------------------------------------------------AGCAGT--- i saiBol1.JH378155 C 0 I 309 s cebCap1.NW_016108150v1 223723 15 + 306014 TTCAGA--------------------------------------------------------AGCGTTAGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85118 15 + 211231 TTCAGA--------------------------------------------------------AGTGTTAGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52307 71 + 2165740 ATCAAAATTCATTTTAAAATTCAGAGTAATccaagtgcagtggctcaagcctacaatcccagaattttaga i otoGar3.GL873745 C 0 I 59 s mm10.chr13 46094121 10 - 120421639 TCCAAG--------------------------------------------------------AAAA----- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 559065 15 + 913073 TTTAAA--------------------------------------------------------AGACACAAT i dasNov3.JH577625 I 76 C 0 e canFam3.chr34 30180544 3374 - 42124431 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=561333.000000 s hg38.chr3_KI270779v1_alt 51512 67 + 205312 CAAGACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTAAATTTCCTAATTTTTCTGTTTAAT s panTro5.chr3 200038760 67 + 202621043 CAAAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTAAATTTCCTAATTTTTCTGTTTAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21262 67 + 190779 CAAAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTAAATTTCCTAATTTTTCTGTTTAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876222 67 - 880730 CAGAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTACATTTCCTAATTGTTCTGTTTAAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796788 67 + 123690457 CAAAACTTCATT--------------------TTT----------AAATTCAGAGTAA---------TAAAC--TCAAAGTCTATATTTCCTAATTTTTCTGTTTAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220092 67 + 180051392 CAAAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTGAATTTCCTAATTTTTCTGTTTAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292206 67 - 181584905 CAAAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTGAATTTCCTAATTTTTCTGTTTAAT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202682 59 + 218577 CAAAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCA---TCTGAATTTCCTAATTTTTCTG-----T i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623541 64 - 91010382 CAAAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCA---TCTGAATTTCCTAATTTTTCTATTTAAT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 899074 67 + 1687011 CACAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TAAAC--TCATAGTCTGAATTTCCTAATTTTTCTGTTTAAT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 160772 66 - 204313951 CAGAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TGAAC--TCATAGTCTGAGTTTCCTCATTGTTCTT-TTAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122615 66 - 16417988 CAGAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TGAAC--TCATAGTCTGAGTTTCCTCATTGTTCTG-TTTAA i saiBol1.JH378155 I 309 C 0 s cebCap1.NW_016108150v1 223738 67 + 306014 CAGAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TGAAC--TGATAGTCTGAGTTTCCTCATTGTTCTGTTTAAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85133 67 + 211231 CAGAACTTCATT--------------------TTT----------AAGTTCAGAGTAA---------TGAAC--TCATAGTCTGAGTTTCCTCATTGTTCTGTTTAAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52437 79 + 2165740 caataccccatt--------------------tttacaaaaaataaaattCAGAGTAA---------TAAACTGTCATAGTCTGAATTTCCTAGTTTTTCTGTTTAAT i otoGar3.GL873745 I 59 C 0 s mm10.chr13 46094131 53 - 120421639 AAGAATTACATT---------------------------------AAGTTTAAAT------------TTAAC--TCATAGTCTGAATTTCCTA--------GTTTAAG i mm10.chr13 C 0 C 0 s dasNov3.JH577625 559080 96 + 913073 CGAAACTTCATTTTAAAATTGAGGAAATTCCATTT----------AAATTCAGTTAAAAATTCAGTTTAAAC--TCATGGTGTGCACTTCCTAGTTTTTCTGTGTAAT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30180544 3374 - 42124431 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=30904.000000 s hg38.chr3_KI270779v1_alt 51579 3 + 205312 TTA s panTro5.chr3 200038827 3 + 202621043 TTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21329 3 + 190779 TTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876289 3 - 880730 TTA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796855 3 + 123690457 TTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220159 3 + 180051392 TTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292273 3 - 181584905 TTA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202741 3 + 218577 TTA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623605 3 - 91010382 TTA i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 899141 3 + 1687011 TTA i colAng1.NW_012116910v1 C 0 M 1949 s calJac3.chr2 160838 3 - 204313951 TTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 122681 3 - 16417988 TTA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223805 3 + 306014 TTA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85200 3 + 211231 TTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52516 3 + 2165740 TGA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46094184 3 - 120421639 TTG i mm10.chr13 C 0 C 0 s canFam3.chr34 30183918 3 - 42124431 tta i canFam3.chr34 I 3374 C 0 s dasNov3.JH577625 559176 3 + 913073 GTG i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 43753 1620 - 100774 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=1490317.000000 s hg38.chr3_KI270779v1_alt 51582 171 + 205312 CATAAA---------TAAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTAAA-AGTT-AAGCAGTTCTTGGTATGGCTGCTTC-TATGAATTAAAAGTTTACAAA---TAATATTTTGTGCCACAGTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCA s panTro5.chr3 200038830 171 + 202621043 CATAAA---------TAAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTAAA-AGTT-AAGCAGTTCTTGGTATGGCTGCTTC-TATGCATTAAAAGTTTACAAA---TAATATTTTGTGCCACAGTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21332 171 + 190779 CATAAA---------TAAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTAAA-AGTT-AAGCAGTTCTTGGTATGGCTGCTTC-TATGAATTAAAAGTTTACAAA---TAATATTTTGTGCCACAGTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876292 173 - 880730 CATAAA---------TAAAATGAAAT-----------------------------------GCAAAAACAACAG----GTCTAGA-AGTTAAAGCAGTTCTTGGTATGGCTGCTTC-TATGAATTAAAAGTTTACAAA---TTATATTTTGTGCCACAGTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120796858 171 + 123690457 CATAAA---------TAAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTACA-AGTT-AAGCAGTTCTTGGTATGGCTGCTTC-TATGGATTAAAAGTTTATGAA---TAATATTTTGTGCCACAGTCAGTGCAAAATCGTGCTGCTGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220162 174 + 180051392 CGTAAC--TT-----TTAAATGAAAT-----------------------------------GC-AAAACAACAGT---GTCTAAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTTC-TATGAATTAAAAGTTTACCAA---TAATATTTTGTGTCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292276 177 - 181584905 CGTAAC--TT-----TTAAATGAAAT-----------------------------------GC-AAAACAACAGTTAAGTCTAAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTTC-TATGAATTAAAAGTTTACCAA---TAATATTTTGTGTCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202744 173 + 218577 CGCAAC--TT-----TTAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTGAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTTC-TATGAATTAAAAGTTTACCAA---TAATATTTTGTGTCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623608 175 - 91010382 CATAAC---------TCAGCTGAAAT-----------------------------------GC-AAAACAACAGTTAAGTCTAAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTTC-TATGGATTAAAAGTTTACCAA---TAATATTTTGTGCCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 160841 178 - 204313951 CATAAC--TTTTAAATAAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTCAA-AGTT-AAGCAGTTCTTGGTATGGCTGCTTC-TATGGATTAAAAGTTTACAAA---CGCTATTTTGTGCCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGTGTGCTGCAAGAAGGTTGCGAGAAAATCA i calJac3.chr2 C 0 M 577 s saiBol1.JH378155 122684 176 - 16417988 CATAAC--TTTTAAATAAAATGAAAT-----------------------------------GC-AAAACAACAG----TTCTGAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTTC-TGTGGATTAAAAGTTTACAAA---TG--ATTTTGTGCCACAGTCCATGCAGAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGCTGCAAGAAGGCTGTGAGAAAATCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 223808 178 + 306014 CATAAC--TTTTAAATAAAATGAAAT-----------------------------------GC-AAAACAACAG----ATCTAAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTTC-TATGCATTAAAAGTTTACAAA---TGGTATTTTGTGCCACAGTCAATGCAAAATCACGCTGCCGTGTTCCGTGTGGGAAGTGTGCTGCAAGAAGGCTGTGAGAAAATCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85203 178 + 211231 CATAAC--TTTTAAATAAAATGAAAT-----------------------------------GC-AAAACAACAG----GTCTAAA-AGTT-AAGCAGTTCTTGGTGTGGCTGCTCC-TATGGATTAAAGGTTTACACA---TGATCTTTTGTGCCACAGTCAATGCAGAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGCTGCAAGAAGGTTGTGAGAAAATCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52519 218 + 2165740 GATAAATATTTTACGTAAAATGAAATTGAAGTGAGGATAAGTTACGGTGATGGTCTTACTAGC-AGAAAAACACTTAGGTCTAAA-GGTT-AAGCAGTTCTTAGTATG---GCTTC-TGTAGATTAAAAGTTTATAAATCTTGATA-TTTGTGTCACAGTCAATGCAAAATCATGCTGCAGTATTCCGTGTGGGAAGCGTGTTGCAAGAAGGCTGTGAGAAAATCA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46094187 161 - 120421639 TATAAA---------T-ATATCAAAT-----------------------------------GT-AGAA-AATAT---------TA-AGTT-GTATGAGTTTTTACCTATCTTTTTC-TGTGCATTAAAAATTTGT-AA---TGGTGTTTTATG--ATAGTCGATGCAGAACCATGCTGCAGTGTTCCGTGTGGGGAGTGTATTGCAAGAAGGCTGTGAAAAAATCA i mm10.chr13 C 0 C 0 s canFam3.chr34 30183921 174 - 42124431 -aaaaa--aT-----AAAAATGAAAT-----------------------------------GC-GTAAGAAAAA----AGCTAAAGGGTT-TACCAGTTTTAGTCCTAGCTGCTTCATGTGAATTAAAGATTGACAAA---TGGTATTTTATGTTCCAGTCGATGCAGAGTCATGCTGCTGTGTTCCGTGTGGGAAGTGTGTTACAGGAAGGCTGTGAGAAAATCA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 559179 172 + 913073 CATACATGTTTTAGAAGAAATGGAAT-----------------------------------AT-AGAAAAAAAC----ATGTAGA-ATTT-TAACA-TTCTTGATGTGATT------CATGGATTAA--GTTTGCAAG---TGATATTTTGTGTTACAGTCGATGCAAAACCATGCTGCAGTGTTCCGTACAGGAAGTGTGTTGCAGGAAGGCTGTGAGAAAATCA i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=729378.000000 s hg38.chr3_KI270779v1_alt 51753 121 + 205312 GCAAGCTCTATGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGTGAGCAG-----ACAGTGGGCTCTGTGCACACTGTTG-GGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTC----TGTCCCGTCAGT s panTro5.chr3 200039001 118 + 202621043 ---AGCTCTACGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGTGAGCAG-----ACAGTGGGCTCTGTGCACACTGTTG-GGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTC----TGTCCCGTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21503 118 + 190779 ---AGCTCTACGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGTGAGCAG-----ACAGTGGGCTCTGTGCACACTGTTG-GGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTC----TGTCCCGTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876465 121 - 880730 GCAAGCTCTACGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGTGAGCAG-----ACAGTGGGCTCTGTGCACACTGTTG-GGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTC----TGTCCCGTCAGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797029 118 + 123690457 ---AGCTCTGCAGAGACCTGAAGGACCTGAAGACGTTCAGTCGGGGCGAGCAG-----ACAGCAGGCTCCGTGCACACTGTTG-GGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTC----TGTCCCGTCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220336 124 + 180051392 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACATTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGTGTTG-GGC--CCTGCCTTCTGTAGGGTGGGCTG----------GTGTC----TGTGCCGTCAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292453 124 - 181584905 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGTGTTG-GGC--CCTGCCTTCTGTAGGGTGGGCTG----------GTGTC----TGTGCCGTCAGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 202917 124 + 218577 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGCGTTG-GGC--CCTGCCTTCTGTAGGGTGGGCTG----------GTGTC----TGTGCCGTCAGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623783 124 - 91010382 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGTGTTG-GGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTC----TGTGCTGTCAGT i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 122860 120 - 16417988 GCAAACTCTATGGAGACCTGAAGCACCTGAAGACGTTCGACAGGGGTGAGCAG-----ACAGCAGGCTCCGCACACACGACTG-GGC--CGCGCCTTTTGCA-GGTGGGCTA----------GTGTC----TATCCAGCCAGT i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 223986 120 + 306014 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACAGGGGTGAGCAG-----ACAGCAGGCTCCACGCACACGACTG-GGC--CGTGCCTTTTGCA-GGTGGGCTA----------GTGTC----TATCCGGCCAGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85381 90 + 211231 GCAAGCTCTACGGCGACCTGAAGCACCTGAAGACGTTTGACAGGGGTGAGCAG-----ACGGCGGGCTCCGCGCACACGACTG-GGC--CGT---------------------------------------------GCCGGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52737 108 + 2165740 GCCAGCTCTATGGAGATCTGAAGCACCTGAAGACATTTGACAGGGGTGAGCAG-----TCAGCA-----TGTG------GCTGAGGT--GCTGCCTTCTGCGGGTTGGGC-------------TGTC----TGTTCTGTCAGG i otoGar3.GL873745 C 0 I 37 s mm10.chr13 46094348 111 - 120421639 GTCAGCTCTATGGAGACCTAAAGCATCTAAAGACATTCGACAGGGGTGAGTCA-----GCAGTACTCTCAGAG-----------GAT--ACTGCCTTCCTTGGGATAGGTTG----------GTATC----TGTCCCTTTTAC i mm10.chr13 C 0 I 1 s canFam3.chr34 30184095 129 - 42124431 GCCAGCTCTATGGAGACCTAAAGCATCTGAAGACATTTGACCGAGGTGAGCAT----TCCATGGGGCCCTGCA--CACAGTTG-GGCTGCTGGATATTTGCAAGACAGACTGCCTCAGAGCCCTGTC----TGTCC---CAGT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 559351 115 + 913073 GCCAGCTCTATGGGGACTTGAAGCATCTGAAGACCTTTGACAGGGGTGAGGAG----CTGAGCAGGTCTCTTCCAGATAAGTG-GAT------------GCAGGGTGGACCG----------ACCTCACGGGGTCCTGGGGA- i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161019 577 - 204313951 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=282838.000000 s hg38.chr3_KI270779v1_alt 51874 66 + 205312 GCTGACTTAGTTC--CATGCTTGC---------TGTCTGGATGGGTGCTGGCCCCCAGCTGTAAAGCCACAACCAGT s panTro5.chr3 200039119 66 + 202621043 GCTGACTTAGTTC--CATGCTTAC---------TGTCTGGATGGGTGCTGGCCCTCAGCTGTAAAGCCACAACCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21621 66 + 190779 GCTGACTTAGTTC--CATGCTTAC---------TGTCTGGATGGGTGCTGGCCCTCAGCTGTAAAGCCACAACCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876586 66 - 880730 GCTGACTTAGTTC--CATGCTTGC---------TGTCTGGATGGGTCCTGGCCCTCAGCTGTAAAGCCACAACCAGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797147 66 + 123690457 GCTGACTTAGTTC--CATGCTTGC---------TGTCTGGATGGGTCCTGGCCCTCAGCTATAAAGCCACAACCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220460 56 + 180051392 GCTGACTTAGTTC--CATGCTTGC---------TGTCCGGAT----------CCACAGCCATAAAGCCACAACCAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292577 56 - 181584905 GCTGCCTTAGTTC--CATGCTTGC---------TGTCCGGAT----------CCACAGCCATAAAGCCACAACCAGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203041 66 + 218577 GCTGACTTAGTTC--CATGCTTGC---------TGTCCGGATGGGTCCTGGCCCACAGCCATAAAGCCATAACCAGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623907 66 - 91010382 GCTGACTTAGTTC--CATGCTTGC---------TGTCCGGATGGGTCCTGGCCCACAGCCATAAAGCCATAACCAGT i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 122981 66 - 16417988 GCTGAGTTAGCTC--CACGCTTGC---------TGTCTGGATGGGTCCTGGCCCACAGCTATAAAGCCACCACCGGG i saiBol1.JH378155 I 1 I 3 s cebCap1.NW_016108150v1 224106 65 + 306014 GCTGCCTTAGCT---CATACTTGC---------TGTCTGGATGGGTCCTGGCCCACAGCTATAAAGCCACCACCAGG i cebCap1.NW_016108150v1 C 0 I 10 s aotNan1.NW_018494784v1 85471 66 + 211231 GCTGACTTAGCTC--CGTGCTTGC---------CGTCTGGATGGGTCCCGGCCCACAGCTATACAGCCGCCGCGGGG i aotNan1.NW_018494784v1 C 0 I 10 s mm10.chr13 46094460 53 - 120421639 ACTACCTTAG-TC--CATGCCTGC---------TGTCCAGCC-ATCTCTTCCCCACAGCTGTATGT----------- i mm10.chr13 I 1 C 0 s canFam3.chr34 30184224 25 - 42124431 GCGGAATTCACTC--T----------------------------------GCCCACAGCTG---------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 559466 60 + 913073 GCCG-CATCGTCCGGCACGCTCCCCTGGGTGGGCGTCTGAAGGGATCCT-GCTCACTGCTGT--------------- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 52845 37 + 2165740 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161019 577 - 204313951 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=23156.000000 s hg38.chr3_KI270779v1_alt 51940 8 + 205312 GACTCCAT s panTro5.chr3 200039185 8 + 202621043 GACTCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21687 8 + 190779 GACTCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876652 8 - 880730 GACTCCAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797213 8 + 123690457 GACTCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220516 8 + 180051392 GGCTCCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292633 8 - 181584905 GGCTCCAC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203107 8 + 218577 GGCTCCAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623973 8 - 91010382 GGCTACAC i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123050 7 - 16417988 GGCTCTG- i saiBol1.JH378155 I 3 C 0 s mm10.chr13 46094513 8 - 120421639 TGCTTTAT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 559526 8 + 913073 GTCTCCCC i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 52845 37 + 2165740 I e canFam3.chr34 30184249 0 - 42124431 C e aotNan1.NW_018494784v1 85537 10 + 211231 I e cebCap1.NW_016108150v1 224171 10 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161019 577 - 204313951 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=56156.000000 s hg38.chr3_KI270779v1_alt 51948 10 + 205312 GGACTAGCAG s panTro5.chr3 200039193 10 + 202621043 GGACTAGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21695 10 + 190779 GGACTAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876660 10 - 880730 GGACTAGCAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797221 10 + 123690457 GGACTAGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220524 10 + 180051392 GGACTAGCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292641 10 - 181584905 GGACTAGCAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203115 10 + 218577 GGACTAGCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623981 10 - 91010382 GGACTAGCAG i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123057 10 - 16417988 GGACTAGCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224181 10 + 306014 GGACTAGCAG i cebCap1.NW_016108150v1 I 10 C 0 s aotNan1.NW_018494784v1 85547 10 + 211231 GGACTAGCAG i aotNan1.NW_018494784v1 I 10 C 0 s mm10.chr13 46094521 1 - 120421639 ---------G i mm10.chr13 C 0 C 0 s dasNov3.JH577625 559534 5 + 913073 GGTCC----- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 52845 37 + 2165740 I e canFam3.chr34 30184249 0 - 42124431 C e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161019 577 - 204313951 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=580122.000000 s hg38.chr3_KI270779v1_alt 51958 96 + 205312 GCCCAGGCTGACAGCTCGGAGGGCC-C-GTGTGAC-------TGGGTCCCACCTGCCCCTGATGGAACTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT s panTro5.chr3 200039203 96 + 202621043 GCCCAGGCTGACAGCTCGGAGGGCC-C-GTGTGAC-------TGGGTCCCGCCTGCCCCTGATGGAAGTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21705 96 + 190779 GCCCAGGCTGACAGCTTGGAGGGCC-C-ATGTGAC-------TGGGTCCCGCCTGCCCCTGATGGAAGTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876670 96 - 880730 GCCCAGGCTGACAGCTCGGAGGGCC-CGGTGTGAC-------TGGGTCCCGCCTGCCCCTGATGGAAG-TTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797231 95 + 123690457 GCCCAGGCTGACATCTCGGAGGGCC-C-ATGTGGC-------TGGGTCCTGCCTGCCCC-GATGGAACTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220534 95 + 180051392 GCCCAGGCTGACAGCTCAGAAGGCC-C-CTGTGAC--------GGGTCCCGCCTGCCCCTGATGGAACTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292651 95 - 181584905 GCCCAGGCTGACAGCTCAGAAGGCC-C-CTGTGAC--------GGGTCCCGCCTGCCCCTGATGGAACTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203125 95 + 218577 GCCCAGGCTGACAGCTCAGTAGGCC-C-CTGTGAC--------GGGTCCCGCCTGCCCCTGATGGAACTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89623991 96 - 91010382 GCCCAGGCGGACAGCTCAGAAGGCC-C-CTGTGAC-------TGGGCCCCGCCTGCCCCTGGTGGAACTTTTTG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123067 85 - 16417988 ATACGGGCAGACAGCTCGGAGGGCC-C-ATGCGAC------------------TGCCCCTGATGGATCCTCATG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224191 85 + 306014 ATACGGGCTGACAGCTCGGAGGGCC-C-ATGTGAC------------------TGCCCCTGATGGATCCTCATG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85557 85 + 211231 GTACGGGCTGACAGCTCGGAGGGCC-C-ACGTGAC------------------TGCCCCTGATGGATCCTCATG-TGTCCCCAGGAATGGTCTGGAACACGGACCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52882 102 + 2165740 GCCCAGGCTGGATGGCCACAGGGCTGT-GTGTGTTAGCCCTGTGGATCCCACCCTCCC---ATGGGCCCTTGTGTTGCCACCAGGAATGGTCTGGAACACAGATCT i otoGar3.GL873745 I 37 C 0 s mm10.chr13 46094522 82 - 120421639 --------------TCCAGAGTACC-T-ACATGAC-------TGGGTCCTATTTGTCTCTCATTGGTTCTTGTG-TATCCCCAGGAATGGTTTGGAACACAGACCT i mm10.chr13 C 0 C 0 s canFam3.chr34 30184249 80 - 42124431 -----------CAGCCTGGAGGACC-C-AGTTAAC-------TGGATCCTATCT---CATGA--GTACTCGGTG-TGTCCCTAGGAATGGTCTGGAACACCGACCT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 559539 72 + 913073 -CTCTGGCTGGC----CACAGGCGC-C-TCATGCC--------------------CGTCTTATG-----CTGTG--GTCCCCAGGAATGGTCTGGAATACCGACCT i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161019 577 - 204313951 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=2662540.000000 s hg38.chr3_KI270779v1_alt 52054 312 + 205312 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTATGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGGGGAAGGAGTCACGGGGCGCGCACGCCGGGGAAGACTACAAGGTGCGCCTTCTCGCCACGC-CCACCTGCACCTGCCTTTTCCTCCCGCCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATGTCGTTTC-CCCAAAAGTATATCCAAAAAA------------TGCC--------------TTTTTCCCTCTGGTAACTTTGATCCCTGGGTTCTCGCCATTTTCTGGATCACTGTGACCTGTTCCTTGCTTTGGGTCGGC s panTro5.chr3 200039299 312 + 202621043 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCGTCAGTGGAGCAGAGGCGTGGAAGGAGTCACGGGGCGCGCACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACGC-CCACCTGCACCTGCCTTTTCCTCCCGCCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATGTCGTTTC-CCCAAAAGTAAATCCAAAAAA------------TGCC--------------TTTTTCCCCCTGGTAACTTTGATCCCTGGGTTCTCGCCATTTTCTGGATCACTGTGACCTGTTCCTTGCTTTGGGTCGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 21801 312 + 190779 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCGTCAGTGGAGCAGAGGCGTGGAAGGAGTCACGGGGCGTGCACGCCAGGGAAGACTACAAGGTGCACCTTCTCGCCACGC-CCACCTGCACCTGCCTTTTCCTCCCGCCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATGTCGTTTC-CCCAAAAGTAAATCCAAAAAA------------TGCC--------------TTTTTCCCCCTGGTAACTTTGATCCCTGGGTTCTCGCCATTTTCTGGATCACTGTGACCTGTTCCTTGCTTTGGGTCGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 876766 314 - 880730 GGTGGAGACCCTGGAGCTGCAGAAACCTGATGCTGTGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGTGGAAGGAGTCACGGGGTGCGCACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACGC-CCACCTGCACCTGCCTTTTCCTCCCGCCTGGTGGGACTCAGCCCC-ACTCCTGCGT-TTTCTCTG-GTTTTATGTCGTTTCTCCCAAAAGTAAATCCAAAAAA------------TGCC-------------TTTTTTCCCCCTGATAACTTTGATCCCTGGGTTCTCACCATTTTCTGGATCACTGTGACCTGTTCCTTGCTTTGGGTCGGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797326 311 + 123690457 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCCGCAGACCATCAGTGGAGCAGAGGCGTGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCACCACAC-CCACCTGCACCTGCCTTTTCCTCCCACCTGGGTGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATTTCGTTTC-CCCAAAAGTAAATCCAAAAAA------------TGCT--------------TTCTTCCCCCTGGTAACTTTGATCCCTGGGTTCTCGCCATCTTCTGGATCACTGCAACCT-TTCCTTGCTTTGGGTCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220629 312 + 180051392 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC-CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATTTCATTTC-CCCAAAAGTAAATCCAAAAAA------------CGCC--------------TTTTTCCCCCTGGTAACTTTGATCCCTGGGTTCCCGCCATCCTCTGGATCACTGTGACCTTTTCCTTGCTTTGGGTCAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180292746 312 - 181584905 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC-CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATTTCATTTC-CCCAAAAGTAAATCCAAAAAA------------CGCC--------------TTTTTCCCCCTGGTAACTTTGATCCCTGGGTTCCCGCCATCCTCTGGATCACTGTGACCTTTTCCTTGCTTTAGGTCACC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203220 312 + 218577 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC-CCACCTGCGCCTGCCTTTTCCTCCCACCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATTTCATTTC-CCCAAAAGTAAATCCAAAAAA------------CGCC--------------TTTTTCCCCCTGGTAACTTTGATCCCTGGGTTCCCGCCATCCTCTGGATCACTGTGACCGTTTCCTGGCTTTGGGTCAGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624087 312 - 91010382 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCCCACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC-CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCAGCCCC-ACCCCTGCAT-TTTCTCTGCATTTTATTTCATTTC-CCCAACAGTAAATCCAAAAAA------------TGCC--------------TTTTTCCCCCTGGTAACTTTGATCCCTGGGTTCCCACCATCCTCTGGATCACTGTGACCTTTTTCTTGCTTTGGGTCAGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161596 292 - 204313951 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCGCGGGGCGCGCACGCCAGAGAAGACTACAAGGTGCGCCTTCTGGCCACAC-CCACCTGCACCTGCCGCTTTCTCCCATCTTGTGTGACTCAACCCC-ACCCCTGCAT-TTTCTCTGCATTTCATTCCATTTC-CCCAAAAGTAAATCCAGAAAG------------TGCC---------------TTTTCCCCCT-----------------GGTTCTCGCCGTCTTCTGCAACACTG--ACCTTTGCTTTGCCTTGGGTCAGT i calJac3.chr2 M 577 C 0 s saiBol1.JH378155 123152 309 - 16417988 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCGGAGGCACGGAAGGAGTCGCGGGGTGCGCACGCCAGAGAAGACTACAAGGTGCGCCTTCTGGCCACGC-CCACCTGCACCTGCCGCTTTCTCCCACCTGGTGGGACTCAACCCC-ACCCCTGCAT-TTTCTCCACATTTCATTCCATTTC-CCCAAAAGTAAATCCAAAAAG------------TGTC---------------TTTTCCCCCTGGTAACATTGATCCCTGGGTTCTTGCCATCTTCTGCAACACTG--ACCTTTGCTTTGCCTTGGGTCAGC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224276 309 + 306014 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCACGGAAGGAGTCGCGGGGCGCGCACGCCAGAGAAGACTACAAGGTGCGCCTTCTGGCCACAC-CCACCTGCACCTGCCACTTTCTCCCACCTGGTGGGACTCAACCCC-ACATCTGCAT-TTTCTCTGCATTTCATTCCATTTC-CCCAAAAGTAAATCCAAAAAG------------TGCC---------------TTTTCCCCCTGGTAACATTGATCCCTGGGTTCTCGCCATCTTCTGCAACACTG--ACCTTTGCTTTGCCTTGGGTCAGC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85642 309 + 211231 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGTGCACTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCGCGGGGCGCGCACGCCAGGGAAGACTACAAGGTGCGCCTTCTGGCCACGC-CCACCCGCACCTGCCGCTTTCTCCCCGCTGGTGGGACTCGACCCC-ACCCCTGCAT-TTTCTCTGCATTTCATTCCATTTC-CCCAAAAGTAAATCCAAAAAG------------TGCC---------------TTTTCCCCCTGGTGACATTGATCCCTGGGTCCTCGCTGTCTTCTGCAGCACTG--ACCTTTGCTTTGCCTTGGGTCAGC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 52984 320 + 2165740 GGTGGAGACCCTGGAGCTACAG-AACCTGATGCTGTGCGCACTGCAAACCATCTATGGAGCAGAGGCACGGAAAGAGTCACGAGGTGCTCATGCCAGGGAAGATTATAAGGTTTGCCACTCACGGAGCC-CCACGTGAACCTGCTGTTT-CTCCCATCTGGTGTTACTCA-CCCC-ACCCCTGCAT-TTTCTCTGCCTTTCGTTTGATTTT-CCCAAAAGGAAGTTGAGAAAAATGCTTTTTTTTTGCA--------------TTTTTTTCCCTGATAATTCTCATTCCTTTGTTC--ACTGTCTTCAGTATGAGTGAGGCCTTTTTCTTTGCTTGAATCAGC i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46094604 281 - 120421639 GGTGGAGACCCTGGAGCTGCAG-AATCTGATGCTGTGCGCACTGCAGACCATATATGGTGCAGAAGCTCGGAAGGAGTCCCGGGGAGCCCATGCCAGGGAAGATTACAAAGTATGTCTCCAG---ATGCGCCACCTTGACCTGACGTTG---CGCACCCAG---------GTCTC-ATCCCTGCTT-GCTTTCTGTGCTTCATTT-ATTTT-CCCAAAACAAAATCAAGGAGA------------ACAC---------------TTTTTCCTTCAATATCTTTTATTC-------------ATATTCTTACTCTCAG--ACCTTTTTCTTGTTTTGAGTTAGC i mm10.chr13 C 0 I 1716 s canFam3.chr34 30184329 328 - 42124431 GGTAGAGACCCTGGAGCTGCAG-AACCTGATGCTCTGTGCACTTCAGACCATTTATGGAGCAGAGGCCCGGAAGGAGTCACGTGGCGCTCACGCCAGGGAAGATTACAAGGTGTGCCCTGACCACGTAC-CCCTGTGCACATCATGCCTTCTGTCCACTGGCATTGCTCAGCCCCTATCCCTGCAT-TTTCTCTACATTTCACTTCATTTT-CCCACGAGTAAATTGAAAAAAAA----------TGCCtttttttttttttttttttttGCCTGATAACTTTCATGCTTTGGT-ATCACTGTGTTTAGTATCAGCATGACCTTTTTCTTGCCTCAGATCGGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 559611 274 + 913073 GGTGGAGACCCTGGAGCTGCAG-AACCTGATGCTGTGCGCAATGCAGACCATCTACGGGGCGGAGGCCCGGAAGGAGTCGCGTGGCGCTCACGCCAGGGAAGATTTCAAGGTGCGGCT-----CCGTGG-CTA---GTGCATGCCCTGT-----------GTGTGCCCTGGGTCC-CTGCCTCCATGCTTCTCTATCTTCTACCTTTTCTC-----AAAGTAAACCAAGAAAAAC----------AGCC--------------------TCCCTG------------CCTTTGCTCTCACCATCTTCAGCGTCAGTGTTACCTTTGTCTTGCTTTGGGCCAGC i dasNov3.JH577625 C 0 C 0 e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=211340.000000 s hg38.chr3_KI270779v1_alt 52366 26 + 205312 ATCCACTGATGCCAGCAGTGGCATCT s panTro5.chr3 200039611 26 + 202621043 ATCCACTGATGCCAGCAGTGGCATCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22113 26 + 190779 ATCCACTGATGCCAGCAGTGGCATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877080 26 - 880730 ATCCACTGATGCCAGCAGTGGCATCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797637 26 + 123690457 GTCCACTGATGCCAGCAGTGGCATCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 220941 26 + 180051392 GTCCACTGATGGCAGCAGTGGCATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293058 26 - 181584905 GTCCACTGATGGCAGCAGTGGCATCT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203532 26 + 218577 CTCCACTGATGGCGGCAGTGGCATCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624399 26 - 91010382 GTCCACTGATAGCAGCAGTGGCATCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161888 26 - 204313951 GGCCACTGATGCCAGCAGTGGCATCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123461 26 - 16417988 GTCCACTGATGCCAGCAGGGGCATCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224585 26 + 306014 GTCCACTGATGCCAGCAGTGGCATCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85951 26 + 211231 GTCCACTGATGCCAGCAGCGGCATCT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 53304 26 + 2165740 ACCCAGTGCTGCCAACAGCAGCATCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30184657 26 - 42124431 ATTTGCTGCTGCCAGTAGGAGCATCT i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 559885 24 + 913073 ATCTCCTGCTGT--GTAACATCATCT i dasNov3.JH577625 C 0 I 96 e mm10.chr13 46094885 1716 - 120421639 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=237407.000000 s hg38.chr3_KI270779v1_alt 52392 39 + 205312 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGGTTAG s panTro5.chr3 200039637 39 + 202621043 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGGTTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22139 39 + 190779 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGGTTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877106 39 - 880730 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGGTTAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120797663 39 + 123690457 CCAAGCCA-ATGTGATTTGCTGTTAGAAG-GCCAAGGTTAG i nomLeu3.chr11 C 0 I 302 s rheMac8.chr6 220967 39 + 180051392 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGTTTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293084 39 - 181584905 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGTTTAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203558 39 + 218577 CCAAGCCA-GTGCGCTTTGCTCTTAGAAG-GCCAAGTTTAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624425 39 - 91010382 CCAAGCCA-ATGTGCTTTGCTGTTAGAAG-GCCAAGGTTAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161914 39 - 204313951 CCAAGCCA-AAGTGCTCTGCAGTTAGAGG-GCCAAGGTTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123487 39 - 16417988 CCAAGCCA-AAGTGCTTTGCAGTTAGAGG-ACCAAGGTTAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224611 39 + 306014 CCAAACCA-AAGTGCTTTGCAGTTAGAGG-GACAAGGTTAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 85977 39 + 211231 CCAAGCCA-AAGTGCTTTGCAGTTAGAGG-GCCAAGGTTGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 53330 39 + 2165740 C--AGCAACACATGCCTTACTTTCGCCAGTGCTGGGGTCAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30184683 38 - 42124431 CTAAGCAA-AACACACCTGACTTACCAGA-TCAAAGATTA- i canFam3.chr34 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=48328.000000 s hg38.chr3_KI270779v1_alt 52431 7 + 205312 AAGTGCA s panTro5.chr3 200039676 7 + 202621043 AAGTGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22178 7 + 190779 AAGTGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877145 7 - 880730 AAGTGCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798004 7 + 123690457 aaGTGCA i nomLeu3.chr11 I 302 C 0 s rheMac8.chr6 221006 7 + 180051392 AAGTGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293123 7 - 181584905 AAGTGCA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203597 7 + 218577 AAGTGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624464 7 - 91010382 AAGTGCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161953 7 - 204313951 CAGTGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123526 7 - 16417988 CAGTGCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224650 7 + 306014 CAGTGCA i cebCap1.NW_016108150v1 C 0 I 17 s aotNan1.NW_018494784v1 86016 7 + 211231 CAGGGCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 53369 7 + 2165740 GAGGGCA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30184721 7 - 42124431 GTATGCA i canFam3.chr34 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=93948.000000 s hg38.chr3_KI270779v1_alt 52438 17 + 205312 GCCAGCGTGGCATGACC s panTro5.chr3 200039683 17 + 202621043 GCCAGCATGGCATGACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22185 17 + 190779 GCCAGCATGGCATGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877152 17 - 880730 GCCAGCGTGGCATGACC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798011 17 + 123690457 GCCAGAGTGTCATGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221013 17 + 180051392 GCCAGAGTGGCATGACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293130 17 - 181584905 GCCAGAGTGGCATGACC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203604 17 + 218577 GCCAGAGTGGCATGACC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624471 17 - 91010382 GCCAGAGTGGCATGACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161960 17 - 204313951 GCCGGAGTAGCATGGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123533 17 - 16417988 GCTGGAGTAGCATGGCC i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 86023 17 + 211231 GCTGGAGTAGCATGGCC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 53376 11 + 2165740 GCCAGAGTGGC------ i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30184728 17 - 42124431 GTCTGAGTACTATAGCC i canFam3.chr34 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=24777.000000 s hg38.chr3_KI270779v1_alt 52455 7 + 205312 AGGAAAT s panTro5.chr3 200039700 7 + 202621043 AGGAAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22202 7 + 190779 AGGAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877169 7 - 880730 AGGAAAT i gorGor5.CYUI01015759v1 C 0 I 1 s nomLeu3.chr11 120798028 7 + 123690457 AGGAAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221030 7 + 180051392 AGGAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293147 7 - 181584905 AGGAAAT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203621 7 + 218577 AGGAAAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624488 7 - 91010382 AGGAAAT i chlSab2.chr4 C 0 C 0 s aotNan1.NW_018494784v1 86040 3 + 211231 AGG---- i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30184745 7 - 42124431 AGAAAAT i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 53387 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e saiBol1.JH378155 123550 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=154104.000000 s hg38.chr3_KI270779v1_alt 52462 49 + 205312 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCC s panTro5.chr3 200039707 49 + 202621043 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22209 49 + 190779 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798035 49 + 123690457 AAATGCCAGTTTATTAAATAATGAGTAAGCCACCATTTCAAACCTGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221037 49 + 180051392 AAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCAAACCTGCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293154 49 - 181584905 AAATGCCAGTTTATTAAATAACGAGTAAGCTACCGTTTCAGACCTGCCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203628 49 + 218577 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAGACCTGCCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624495 49 - 91010382 AAATGCCAGTTTATTTAATAACGGGTAAGCCACCGTTTCAAACCTGCCC i chlSab2.chr4 C 0 C 0 s aotNan1.NW_018494784v1 86043 49 + 211231 AAATGCTAGTTTATTAAAGAATGAGTCAGTCATCGTTTCAGACCTGCCC i aotNan1.NW_018494784v1 C 0 I 205 s canFam3.chr34 30184752 38 - 42124431 -----------AGTAAAATGAGAGATAAATCATTATTTGAGACCTGACT i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 53387 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e saiBol1.JH378155 123550 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=4095.000000 s hg38.chr3_KI270779v1_alt 52511 1 + 205312 T s panTro5.chr3 200039756 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22258 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798084 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221086 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293203 1 - 181584905 T i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203677 1 + 218577 T i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624544 1 - 91010382 T i chlSab2.chr4 C 0 C 0 s otoGar3.GL873745 53387 1 + 2165740 T i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30184790 1 - 42124431 T i canFam3.chr34 C 0 I 134 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e saiBol1.JH378155 123550 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=5588.000000 s hg38.chr3_KI270779v1_alt 52512 4 + 205312 ATGG s panTro5.chr3 200039757 4 + 202621043 GTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22259 4 + 190779 GTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798085 4 + 123690457 GTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221087 4 + 180051392 AAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293204 4 - 181584905 AAGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203678 4 + 218577 GTGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624545 4 - 91010382 AAGG i chlSab2.chr4 C 0 C 0 e otoGar3.GL873745 53388 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e saiBol1.JH378155 123550 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=129357.000000 s hg38.chr3_KI270779v1_alt 52516 43 + 205312 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA s panTro5.chr3 200039761 43 + 202621043 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22263 43 + 190779 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798089 43 + 123690457 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i nomLeu3.chr11 C 0 T 102 s rheMac8.chr6 221091 43 + 180051392 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293208 43 - 181584905 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203682 43 + 218577 AGGAAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624549 43 - 91010382 AGGAAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCA i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123550 43 - 16417988 AGGAAATGCTAGATTATTAAAGAATGAGTCAGTCAGCATTTCA i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 53388 22 + 2165740 GGGAAAGACTGCTTTACTGGAC--------------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=25044.000000 s hg38.chr3_KI270779v1_alt 52559 12 + 205312 AGCCTGCCCTGT s panTro5.chr3 200039804 12 + 202621043 AGCCTGGCCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22306 12 + 190779 AGCCTGCCCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr6 221134 12 + 180051392 GACCTGCCCTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293251 12 - 181584905 GACCTGCCCTGT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203725 12 + 218577 GACCTGCCCTGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624592 12 - 91010382 GACCTGCCCTGT i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123593 12 - 16417988 GACCTGCCCTGG i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 53410 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e nomLeu3.chr11 120798132 102 + 123690457 T e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=6160.000000 s hg38.chr3_KI270779v1_alt 52571 2 + 205312 GG s panTro5.chr3 200039816 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22318 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798030 1 + 123690457 -G i nomLeu3.chr11 T 102 C 0 s rheMac8.chr6 221146 2 + 180051392 GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293263 2 - 181584905 GG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203737 2 + 218577 GG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624604 2 - 91010382 GG i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123605 2 - 16417988 GG i saiBol1.JH378155 C 0 T 57 e otoGar3.GL873745 53410 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=8091.000000 s hg38.chr3_KI270779v1_alt 52573 3 + 205312 AGG s panTro5.chr3 200039818 3 + 202621043 AGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22320 3 + 190779 AGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798031 3 + 123690457 AAG i nomLeu3.chr11 C 0 I 1 s rheMac8.chr6 221148 3 + 180051392 AAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293265 3 - 181584905 AAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012004452v1 203739 3 + 218577 AGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624606 3 - 91010382 AGG i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123550 3 - 16417988 AGG i saiBol1.JH378155 T 57 C 0 e otoGar3.GL873745 53410 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e gorGor5.CYUI01015759v1 877176 1 - 880730 I a score=150043.000000 s hg38.chr3_KI270779v1_alt 52576 54 + 205312 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGG s panTro5.chr3 200039821 54 + 202621043 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22323 54 + 190779 AAATGCCAGTTTATTAAATAATGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877177 54 - 880730 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGG i gorGor5.CYUI01015759v1 I 1 C 0 s nomLeu3.chr11 120798035 54 + 123690457 AAATGCCAGTTTATTAAATAATGAGTAAGCCACCATTTCAAACCTGCCCTGTGG i nomLeu3.chr11 I 1 C 0 s rheMac8.chr6 221151 54 + 180051392 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAGACCTGCCCTGCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293268 54 - 181584905 AAATGCCAGTTTATTAAACAACGAGTAAGCCACCGTTTCAGACCTGCCCTAAGG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89624609 54 - 91010382 AAATGCCAGTTTATTAAATAACAAGTAAGCCACCATTTCAGACCTGCCCTAAGG i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123553 54 - 16417988 AAATGCTAGATTATTAAAGAATGAGTCAGTCAGCATTTCAGACCTGCCCTGGGG i saiBol1.JH378155 C 0 T 57 s otoGar3.GL873745 53410 16 + 2165740 -------------TGAAATGATGA-------------------------TGGGA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C a score=13095.000000 s hg38.chr3_KI270779v1_alt 52630 3 + 205312 AGG s panTro5.chr3 200039875 3 + 202621043 AGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22377 3 + 190779 AGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877231 3 - 880730 AGG i gorGor5.CYUI01015759v1 C 0 T 57 s nomLeu3.chr11 120798089 3 + 123690457 AGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221205 3 + 180051392 AGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293322 3 - 181584905 AGG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89624663 3 - 91010382 AGG i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123550 3 - 16417988 AGG i saiBol1.JH378155 T 57 C 0 s otoGar3.GL873745 53426 3 + 2165740 AGG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C a score=73482.000000 s hg38.chr3_KI270779v1_alt 52633 40 + 205312 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA s panTro5.chr3 200039878 29 + 202621043 AAATGCCAGTTTATTAAATAACGAGTAAG----------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22380 29 + 190779 AAATGCCAGTTTATTAAATAACGAGTAAG----------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120798092 40 + 123690457 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221208 40 + 180051392 AAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293325 40 - 181584905 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89624666 40 - 91010382 AAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123553 40 - 16417988 AAATGCTAGATTATTAAAGAATGAGTCAGTCAGCATTTCA i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 53429 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C e gorGor5.CYUI01015759v1 877234 57 - 880730 T a score=5808.000000 s hg38.chr3_KI270779v1_alt 52673 7 + 205312 AGCCTGC s nomLeu3.chr11 120798132 7 + 123690457 GACCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221248 7 + 180051392 GACCTGC i rheMac8.chr6 C 0 C 0 s chlSab2.chr4 89624706 7 - 91010382 GACCTGC i chlSab2.chr4 C 0 T 57 s saiBol1.JH378155 123593 7 - 16417988 GACCTGC i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 53429 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e panPan2.chrUn_NW_014024201v1 22409 0 + 190779 C e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C e macFas5.chr6 180293365 0 - 181584905 C e gorGor5.CYUI01015759v1 877234 57 - 880730 T e panTro5.chr3 200039907 0 + 202621043 C a score=2739.000000 s hg38.chr3_KI270779v1_alt 52680 7 + 205312 CCTGTGG s nomLeu3.chr11 120798139 7 + 123690457 CCTGTGG i nomLeu3.chr11 C 0 T 57 s chlSab2.chr4 89624656 7 - 91010382 CCTAAGG i chlSab2.chr4 T 57 C 0 s saiBol1.JH378155 123600 7 - 16417988 CCTGGGG i saiBol1.JH378155 C 0 T 57 e otoGar3.GL873745 53429 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224657 17 + 306014 I e panPan2.chrUn_NW_014024201v1 22409 0 + 190779 C e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 161977 0 - 204313951 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C e gorGor5.CYUI01015759v1 877234 57 - 880730 T e panTro5.chr3 200039907 0 + 202621043 C a score=4365.000000 s hg38.chr3_KI270779v1_alt 52687 3 + 205312 AGG s nomLeu3.chr11 120798089 3 + 123690457 AGG i nomLeu3.chr11 T 57 C 0 s chlSab2.chr4 89624663 3 - 91010382 AGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161977 3 - 204313951 AGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123550 3 - 16417988 AGG i saiBol1.JH378155 T 57 C 0 s cebCap1.NW_016108150v1 224674 3 + 306014 AGG i cebCap1.NW_016108150v1 I 17 C 0 e otoGar3.GL873745 53429 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e panPan2.chrUn_NW_014024201v1 22409 0 + 190779 C e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C e gorGor5.CYUI01015759v1 877234 57 - 880730 T e panTro5.chr3 200039907 0 + 202621043 C a score=31041.000000 s hg38.chr3_KI270779v1_alt 52690 18 + 205312 AAATGCCAGTTTATTAAA s gorGor5.CYUI01015759v1 877177 18 - 880730 AAATGCCAGTTTATTAAA i gorGor5.CYUI01015759v1 T 57 C 0 s nomLeu3.chr11 120798092 18 + 123690457 AAATGCCAGTTTATTAAA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 89624666 18 - 91010382 AAATGCCAGTTTATTAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161980 18 - 204313951 AAATGCTAGTTTCTTAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123553 18 - 16417988 AAATGCTAGATTATTAAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224677 18 + 306014 AAATGCTAGTTTATTAAA i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 53429 0 + 2165740 C e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e panPan2.chrUn_NW_014024201v1 22409 0 + 190779 C e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e cerAty1.NW_012004452v1 203742 0 + 218577 C e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C e panTro5.chr3 200039907 0 + 202621043 C a score=92430.000000 s hg38.chr3_KI270779v1_alt 52708 30 + 205312 TAACAAGTAAGTCACCGTTTCAGACCTGCC s panTro5.chr3 200039907 19 + 202621043 -----------TCACCGTTTCAGACCTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22409 19 + 190779 -----------TCACCGTTTCAGACCTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877195 30 - 880730 TAACGAGTAAGCCACCGTTTCAAGCCTGCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798110 30 + 123690457 TAACGAGTAAGCCACCGTTTCAGACCTGCC i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004452v1 203742 30 + 218577 TAACGAGTAAGCCACCGTTTCAGACCTGCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624684 30 - 91010382 TAACGAGTAAGCCACCGTTTCAGACCTGCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161998 30 - 204313951 GAATGAGTCAGTCATCCTTTCAGACCTGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123571 30 - 16417988 GAATGAGTCAGTCAGCATTTCAGACCTGCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 224695 30 + 306014 GAATGAGTTAGTCATCATTTCAGACCTGCC i cebCap1.NW_016108150v1 C 0 I 1686 s otoGar3.GL873745 53429 16 + 2165740 --------------TCATTTCAGACCTGCC i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=12597.000000 s hg38.chr3_KI270779v1_alt 52738 6 + 205312 TTGTGG s panTro5.chr3 200039926 6 + 202621043 CTGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22428 6 + 190779 CTGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877225 6 - 880730 CTGTGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798140 6 + 123690457 CTGTGG i nomLeu3.chr11 C 0 T 114 s cerAty1.NW_012004452v1 203772 6 + 218577 CTGTGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624714 6 - 91010382 CTGTGG i chlSab2.chr4 C 0 T 114 s calJac3.chr2 162028 6 - 204313951 CTGGGG i calJac3.chr2 C 0 I 3 s saiBol1.JH378155 123601 6 - 16417988 CTGGGG i saiBol1.JH378155 C 0 I 3 s otoGar3.GL873745 53445 4 + 2165740 TCAT-- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=32551.000000 s hg38.chr3_KI270779v1_alt 52744 10 + 205312 AGGAAATGCC s panTro5.chr3 200039932 10 + 202621043 AGGAAATGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22434 10 + 190779 AGGAAATGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877231 10 - 880730 AGGAAATGCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798032 10 + 123690457 AGTAAATGCC i nomLeu3.chr11 T 114 C 0 s cerAty1.NW_012004452v1 203778 10 + 218577 AGGAAATGCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624606 10 - 91010382 AGGAAATGCC i chlSab2.chr4 T 114 C 0 s calJac3.chr2 162037 10 - 204313951 GGGAAAGGTC i calJac3.chr2 I 3 I 21 s saiBol1.JH378155 123610 10 - 16417988 GGGAAAGGTC i saiBol1.JH378155 I 3 C 0 s mm10.chr13 46096601 10 - 120421639 AGGAAATGCT i mm10.chr13 I 1716 C 0 e otoGar3.GL873745 53449 0 + 2165740 C e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=23153.000000 s hg38.chr3_KI270779v1_alt 52754 16 + 205312 AGTTTACTAAATAACG s panTro5.chr3 200039942 16 + 202621043 AGTTTACTAAATAACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22444 16 + 190779 AGTTTACTAAATAACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877241 16 - 880730 AGTTTATTAAGTAACG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798042 16 + 123690457 AGTTTATTAAATAATG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004452v1 203788 16 + 218577 AGTTTATTAAATAACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624616 16 - 91010382 AGTTTATTAAATAACA i chlSab2.chr4 C 0 C 0 s saiBol1.JH378155 123620 4 - 16417988 ---TTAT--------- i saiBol1.JH378155 C 0 C 0 s mm10.chr13 46096611 14 - 120421639 GACTTATTGAGTCA-- i mm10.chr13 C 0 C 0 e otoGar3.GL873745 53449 0 + 2165740 C e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e macNem1.NW_012013899v1 43753 1620 - 100774 M e calJac3.chr2 162047 21 - 204313951 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=27748.000000 s hg38.chr3_KI270779v1_alt 52770 10 + 205312 AGTAAGCCAC s panTro5.chr3 200039958 10 + 202621043 AGTAAGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22460 10 + 190779 AGTAAGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877257 10 - 880730 AGTAAGCCAC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798058 10 + 123690457 AGTAAGCCAC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 45373 10 - 100774 AGTAAGCCAC i macNem1.NW_012013899v1 M 1620 C 0 s cerAty1.NW_012004452v1 203804 10 + 218577 AGTAAGCCAC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624632 10 - 91010382 AGTAAGCCAC i chlSab2.chr4 C 0 I 71 s saiBol1.JH378155 123624 6 - 16417988 ----AGCTCC i saiBol1.JH378155 C 0 I 2 e otoGar3.GL873745 53449 0 + 2165740 C e mm10.chr13 46096625 0 - 120421639 C e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e calJac3.chr2 162047 21 - 204313951 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=9479.000000 s hg38.chr3_KI270779v1_alt 52780 6 + 205312 TGTTTC s panTro5.chr3 200039968 6 + 202621043 TGTTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22470 6 + 190779 TGTTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877267 6 - 880730 CGTTTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798068 6 + 123690457 CATTTC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 45383 6 - 100774 CGTTTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203814 6 + 218577 CGTTTC i cerAty1.NW_012004452v1 C 0 C 0 s saiBol1.JH378155 123632 6 - 16417988 CACTTT i saiBol1.JH378155 I 2 I 3 s mm10.chr13 46096625 2 - 120421639 ----TC i mm10.chr13 C 0 C 0 e otoGar3.GL873745 53449 0 + 2165740 C e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e calJac3.chr2 162047 21 - 204313951 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e chlSab2.chr4 89624642 71 - 91010382 I e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=1113.000000 s hg38.chr3_KI270779v1_alt 52786 1 + 205312 C s panTro5.chr3 200039974 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22476 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877273 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798074 1 + 123690457 A i nomLeu3.chr11 C 0 I 57 s macNem1.NW_012013899v1 45389 1 - 100774 A i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203820 1 + 218577 A i cerAty1.NW_012004452v1 C 0 C 0 s mm10.chr13 46096627 1 - 120421639 A i mm10.chr13 C 0 C 0 e otoGar3.GL873745 53449 0 + 2165740 C e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e calJac3.chr2 162047 21 - 204313951 I e saiBol1.JH378155 123638 3 - 16417988 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e chlSab2.chr4 89624642 71 - 91010382 I e macFas5.chr6 180293365 0 - 181584905 C e rheMac8.chr6 221255 0 + 180051392 C a score=1778.000000 s hg38.chr3_KI270779v1_alt 52787 1 + 205312 A s panTro5.chr3 200039975 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22477 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877274 1 - 880730 A i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798132 1 + 123690457 G i nomLeu3.chr11 I 57 C 0 s macFas5.chr6 180293365 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45390 1 - 100774 G i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203821 1 + 218577 G i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 162068 1 - 204313951 G i calJac3.chr2 I 21 C 0 s saiBol1.JH378155 123641 1 - 16417988 G i saiBol1.JH378155 I 3 C 0 s mm10.chr13 46096628 1 - 120421639 G i mm10.chr13 C 0 C 0 e otoGar3.GL873745 53449 0 + 2165740 C e dasNov3.JH577625 559909 96 + 913073 I e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e chlSab2.chr4 89624642 71 - 91010382 I e rheMac8.chr6 221255 0 + 180051392 C a score=32395.000000 s hg38.chr3_KI270779v1_alt 52788 6 + 205312 ACCTGT s panTro5.chr3 200039976 6 + 202621043 ACCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22478 6 + 190779 ACCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877275 6 - 880730 ACCTGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798133 6 + 123690457 ACCTGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180293366 6 - 181584905 ACCTGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45391 6 - 100774 ACCTGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203822 6 + 218577 ACCTGC i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 162069 6 - 204313951 ACCCGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123642 6 - 16417988 ACCTGC i saiBol1.JH378155 C 0 C 0 s mm10.chr13 46096629 6 - 120421639 ACCTGT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 560005 6 + 913073 ACCTGC i dasNov3.JH577625 I 96 C 0 e otoGar3.GL873745 53449 0 + 2165740 C e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M e chlSab2.chr4 89624642 71 - 91010382 I e rheMac8.chr6 221255 0 + 180051392 C a score=115916.000000 s hg38.chr3_KI270779v1_alt 52794 16 + 205312 CCTGTGGTTTGGAAAA s panTro5.chr3 200039982 16 + 202621043 CCTGTGGTTTGGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22484 16 + 190779 CCTGTGGTTTGGAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877281 16 - 880730 CCTGTGGTTTGGAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798139 16 + 123690457 CCTGTGGTTTGGAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221255 16 + 180051392 CCTGTGGCTTGGAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293372 16 - 181584905 CCTGTGGCTTGGAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45397 16 - 100774 CCTGTGGTTTGGAAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203828 16 + 218577 CCTGTGGTTTGGAAAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624713 16 - 91010382 CCTGTGGTTTGGAAAA i chlSab2.chr4 I 71 C 0 s calJac3.chr2 162075 16 - 204313951 CCTGGGGTCTGGGAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123648 16 - 16417988 CCTGGGGTCTGGGAAA i saiBol1.JH378155 C 0 C 0 s otoGar3.GL873745 53449 10 + 2165740 ------GTGTAGAAAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46096635 16 - 120421639 ATTGAGGCTTGGAAAA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 560011 16 + 913073 CCTGTGGTTTAGAAAG i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=75595.000000 s hg38.chr3_KI270779v1_alt 52810 49 + 205312 ----GGTATTAT--------------------------AGAGCCTGTCCTGTGGTTTGATTACGGAGACTGCCCTGTGG------------------ s panTro5.chr3 200039998 49 + 202621043 ----GGTATTAT--------------------------AGAGCCTGTCCTGTGGTTTGATTACGGAGCCTGCCCTGTGG------------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22500 49 + 190779 ----GGTATTAT--------------------------AGAGCCTGTCCTGTGGTTTGATTACGGAGCCTGCCCTGTGG------------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877297 75 - 880730 ----GGTATTATAGAGCCTGGCCCTGTGGTTTGATTACAGAGCCTGTCCTGTGGTTTGATTACGGAGCCTGCCCTGTGG------------------ i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798155 24 + 123690457 ----GGTATTAT--------------------------AGAGC-------------------------CTGCCCTGTGG------------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221271 24 + 180051392 ----GGTGTTAT--------------------------AGAGC-------------------------CTGCCCTGTGG------------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293388 24 - 181584905 ----GGTATTAT--------------------------AGAGC-------------------------CTGCCCTGTGG------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45413 24 - 100774 ----GGTATTAT--------------------------AGAGC-------------------------CTGCCCTGTGG------------------ i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203844 24 + 218577 ----GGTATTAT--------------------------AGAGC-------------------------CTGCCCTGTGG------------------ i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624729 24 - 91010382 ----GGTATTAT--------------------------AGAGC-------------------------CTGCCCTGTGG------------------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162091 39 - 204313951 ----GGTGTTGT--------------------------AGCTCCTGCACTTGGGTGAC----------CTGCCCTGGGG------------------ i calJac3.chr2 C 0 C 0 s otoGar3.GL873745 53459 24 + 2165740 ----GGTATTAC--------------------------AGATC-------------------------CTGATCCTCGG------------------ i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46096651 21 - 120421639 ----GGAATTGG--------------------------AGAT--------------------------CTGCCCTTG-------------------- i mm10.chr13 C 0 C 0 s dasNov3.JH577625 560027 46 + 913073 GGACAATATTAC--------------------------AGATC-------------------------TTGATCTTTGGTTACTAGGTTTTTTGGGG i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30184791 134 - 42124431 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e saiBol1.JH378155 123664 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=14092.000000 s hg38.chr3_KI270779v1_alt 52859 2 + 205312 TC s panTro5.chr3 200040047 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22549 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877372 2 - 880730 TC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798179 2 + 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221295 2 + 180051392 TC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293412 2 - 181584905 TC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45437 2 - 100774 TC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203868 2 + 218577 TC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624753 2 - 91010382 TC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162130 2 - 204313951 TC i calJac3.chr2 C 0 I 199 s otoGar3.GL873745 53483 2 + 2165740 TC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30184925 2 - 42124431 cc i canFam3.chr34 I 134 C 0 s dasNov3.JH577625 560073 2 + 913073 TT i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46096672 0 - 120421639 C e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e saiBol1.JH378155 123664 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=732314.000000 s hg38.chr3_KI270779v1_alt 52861 148 + 205312 --ACTTGTTCTTCAGATGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAAA-CGACGGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCAGGATAAACCACATCGGCAAAAG s panTro5.chr3 200040049 149 + 202621043 --ACTTGTTCTTCAGATGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAAAACGACGGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCAGGATAAACCACATCGGCAAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22551 148 + 190779 --ACTTGTTCTTCAGATGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAAA-CAACGGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCAGGATAAACCACATCGGCAAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877374 149 - 880730 --ACTTGTTCTTCAGATGAACTGATTTTTTATGCAGAGCAACACCTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAA--CGACGGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCAGGATAAACCACATCAGCAAAAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798181 148 + 123690457 --ACTTGTTCTTCAGATGAACTGA-TTTTTGTGCAGAGC-ACACATGTTGGATTCTGCCTGCTAAGAGTTTTTCACATATGATAGCAAAAAA-CCACAGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCCGGATAAACCACATCAGCAAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221297 148 + 180051392 --ACTTGTTCTTCAGGTGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTCTCACATACGATAGCAGAAAA-ACACGGAAAGGGAAGCTCGGGGCACAAATGCAGGTTCAGGATAAAGCACATCCGCGAAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293414 148 - 181584905 --ACTTGTTCTTCAGGTGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTCTCACATACGATAGCAGAAAA-ACACGGAAAGGGAAGCTCGGGGCACAAATGCAGGTTCAGGATAAAGCACATCAGCGAAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45439 148 - 100774 --ACTTGTTCTTCAGGTGAACTGA-TTTTGGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTCTCACATACGATAGCAAAAAA-ACACGGAAAGGGAAGCTCGGGGCACAAATGCAAGTTCAGGATAAAGCACATCAGCGAAAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 203870 148 + 218577 --ACTTGTTCTTCAGGTGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATACGATAGCAAAAAA-ACACGGAAAGGGAAGCTTGGGGAACAAATGCAAGTTCAGGATAAACCACATCAGCAAAAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624755 140 - 91010382 --ACTTGTTCTTCAGGTGAACTGA-TTTTTGTGCAGAGC-ACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAG---------CACGGAAAGGGAAGCTTGGGGTACAAATGCAAGTTCAGGATAAACCACATCAGCAAAAG i chlSab2.chr4 C 0 C 0 s otoGar3.GL873745 53485 140 + 2165740 --ACTTATTTTTTAGATGAACTAA-TTTTTGTGGGGAGC-ACCTGTGTC-AATTGTGCCAGAAAAGAGTATTT-------AATAGCAAAAAA-ACATGGAAAGGGAAGCTTGGGGGGCAGGTCCAAGTGCAGGCAAAACTATGTCAGCAGAAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46096672 122 - 120421639 --CCATGGTTTTTATGCAAACTGT-TGTCTGTACAGAAC-ACACAAGTTGGATTCT------------------ACATGTGGTGGTAAAAAA-C------ACAAGAAGCTT-GGGTGTAGCTCCAAGTTCAGGATGAA-CACATCAACTAGAG i mm10.chr13 C 0 I 581 s canFam3.chr34 30184927 140 - 42124431 --AGGTGCCCCATAAATTACATGA-TTTTTATGCAGAGT-ACA--GTTCAGATTCTTCCAGAACAGAGACTCA-GCGTATGACAGGAAAATG-GGAAGGAAATAGGCACTTGAGGC-CAAATACAACTTCAGGATGCA--ACATCAGCAAG-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 560075 149 + 913073 TTTTTTGTTTTT--AATAAATTGA-CTTTCATTCAAGGC-ACATGTGTTAGGTCCTGCCAGAAAAGATAATTCAACATATGGTAGGAAAAAAAACATTAAAAGGAATACTGGGGTTGCAAATGCAAGCTAAGGATAAAATAAATTAACAAAAG i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e calJac3.chr2 162132 199 - 204313951 I e saiBol1.JH378155 123664 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=338443.000000 s hg38.chr3_KI270779v1_alt 53009 80 + 205312 GACAAA-----------------------------GGCTCCACAAGGCAGGCGCACAGGCT--GGTTCAGGGCCATGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT s panTro5.chr3 200040198 80 + 202621043 GACAAA-----------------------------GGCTCCACAAGGCAGGCACACAGGCT--GGTTCAGGACCATGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22699 80 + 190779 GACAAA-----------------------------GGCTCCACAAGGCAGGCACACAGGCT--GGTTCAGGACCATGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877523 80 - 880730 GACAAA-----------------------------GGCTCCACAAGGCAGGCACACAGGCT--GGTTCAGGACCATGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798329 78 + 123690457 GACAAA-----------------------------GGCTCCACAAGGCAGGCACACAGGCT--GGTTCAGGAC--TGTGTGGGCAGCTGGTGGCAGCCTTTCCAGTCAGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221445 80 + 180051392 GACAAA-----------------------------GGCTGCACGAGGCAGGCACGCAGGCT--GGTTCAGGACCGTGTGTGGGCGGCGGCTGGTGACCTTTCCAGCCCGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293562 80 - 181584905 GACAAA-----------------------------GGCTGCACGAGGCAGGCACACAGGCT--GGTTCAGGACCGTGTGTGGGCGGCGGCTGGTGACCTTTCCAGCCCGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45587 80 - 100774 GACAAA-----------------------------GGCTGCACATGGCAGGCACACAGGCT--GGTTCAGGACCGTGTGTGGGCGGCGGCTGGTGACCTTTCCAGCCCGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204018 80 + 218577 GACAAA-----------------------------GGCTGCACAAGGCAGGCACACAGGCT--GGTTCCGGACCGTGTGTGGGCGGCGGCTGGTGACCTTTCCAGTCCGCT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624895 80 - 91010382 GACAAA-----------------------------GGCTGCACGAGGCAGGCACACAGGCT--GGTTCAGGACCGTGTGTGGGCGGCGGCCGGCAGCCTTTCCAGTCAGCT i chlSab2.chr4 C 0 C 0 s otoGar3.GL873745 53625 81 + 2165740 GTAAAG-----------------------------ACTTTCCAGAGCCAGACATGCAGGCTTGGGCTCAAGATGGCATGTAGTT-GCTGACAACAGCCTTTCTAGTCAGCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30185067 78 - 42124431 GCCTGA-----------------------------G---CCGCTTTCCAGACACACAGGCTCTGGCCCAGGACCAGGTGATGTT-GCTGGTAGCAGCCTCGTCCATCAGCA i canFam3.chr34 C 0 I 1 s dasNov3.JH577625 560224 110 + 913073 GATGAATTAAAAAACTCTCTGGCTGATACCTGAGTAACTGTACTAGACAAACATACAGACTTTGGTTCAGGATGGTGTTTGGGT-GCTAATAACAGCCTGCACAGTCAGTC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46096794 581 - 120421639 I e aotNan1.NW_018494784v1 86092 205 + 211231 I e cebCap1.NW_016108150v1 224725 1686 + 306014 I e calJac3.chr2 162132 199 - 204313951 I e saiBol1.JH378155 123664 0 - 16417988 C e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=465162.000000 s hg38.chr3_KI270779v1_alt 53089 62 + 205312 G-AACACA-GTGAATGGGA------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTTACTGATTTACCCTCCAC s panTro5.chr3 200040278 62 + 202621043 G-AACACG-GTGAATGGGA------------------AAATC--------------------AT--TTTTATTGACCATGAAATTTTACTGATTTACCCTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22779 62 + 190779 G-AACACG-GTGAATGGGA------------------AAATC--------------------AT--TTTTATTGACCATGAAATTTTACTGATTTACCCTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877603 63 - 880730 GAAACATG-GTGAATGGGA------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTTACTGATTTACCCTCCAC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798407 62 + 123690457 G-AACACG-GTGAATGGGA------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTTACTGATTTACCCTCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221525 61 + 180051392 G-AGCGCG-GTGAGTGGG-------------------AGATC--------------------AT--TTTTATTCACCATGAAATTTCACCGATTTACCCTCCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293642 61 - 181584905 G-AGCGCG-GTGAGTGGG-------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTCACCGATTTACCCTCCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45667 61 - 100774 G-AGCGCG-GTGAGTGGG-------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTCACCGATTTACCCTCCAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204098 61 + 218577 G-AGCACG-GTGAGTGGG-------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTTACCGATTTACCCTCCAT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89624975 61 - 91010382 G-AGCACG-GTGAGTGGG-------------------AAATC--------------------AT--TTTTATTCACCATGAAATTTTACCGATTTACCCTCCAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162331 62 - 204313951 G-AACACA-GTGAATGGGA------------------AAATG--------------------AC--TTGTGTTTACTGTGAAATGGTACTGATGTAGCCTCCAC i calJac3.chr2 I 199 C 0 s saiBol1.JH378155 123664 62 - 16417988 G-AACACA-GTGAATGGGA------------------AAATC--------------------AC--TTGTATTTACTGTGAAATGTTATTGATTTACCCTCCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 226411 62 + 306014 G-AACACA-GTGAATGGGA------------------AAATC--------------------AC--TTGTATTTACTGTGAAATGTTACTGATTTACCCTCCAC i cebCap1.NW_016108150v1 I 1686 C 0 s aotNan1.NW_018494784v1 86297 62 + 211231 G-AACACA-GTGAACGGGA------------------AAATC--------------------AC--TTGTATTTACTGTGAAATGTTACTGATTCACCCTCCAC i aotNan1.NW_018494784v1 I 205 C 0 s otoGar3.GL873745 53706 83 + 2165740 -CAATATGAGTGAATGAGAAGACTGGTTAACCAGGAGAAATC------------------AGAT--TTTTATTTACTGTGAAATTTTATTGATCTGTCCTGCAC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30185146 82 - 42124431 G-ACAGAA-GCACATGGGG------------------AAATTGGCTACAGGAAGAGGATTAGGT--TCTGATTTACAGTGAAATTCTGTTAATTTGCCCTCCAC i canFam3.chr34 I 1 I 1614 s dasNov3.JH577625 560334 83 + 913073 G-AACATGGGCAAATGGGAGAATGGCCTCAGCAAGAGAAATC--------------------ATGCGTTGGTCTACTGTGAAGTTTTATTAAATTTTCTTCCAC i dasNov3.JH577625 C 0 I 1562 e mm10.chr13 46096794 581 - 120421639 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=23157.000000 s hg38.chr3_KI270779v1_alt 53151 3 + 205312 TAG s panTro5.chr3 200040340 3 + 202621043 TAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22841 3 + 190779 TAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877666 3 - 880730 TAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798469 3 + 123690457 TAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221586 3 + 180051392 TGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293703 3 - 181584905 TGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45728 3 - 100774 TGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204159 3 + 218577 TGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625036 3 - 91010382 TGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162393 3 - 204313951 TAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123726 3 - 16417988 TAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 226473 3 + 306014 TAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 86359 3 + 211231 TAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 53789 3 + 2165740 TGG i otoGar3.GL873745 C 0 I 381 e mm10.chr13 46096794 581 - 120421639 I e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=3577524.000000 s hg38.chr3_KI270779v1_alt 53154 533 + 205312 AATATGCTGATGGCTGTGATCACTGCTCAGAATTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAAtttattattttt---------------aattttttgagatggagt---ctca--ttgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcccaggttcaagtga-ttctcctgcctcagcctcccaagcagctggggttacaggcgcatgccaccgtgcccggctaa-ttttgtattttcagtaaagacggggtttcaccatgttggccaggctagtctcgaactcccgacctcaagtgaaccacccaccttggccttccaaagtgctagga----ttacaggcatgagccactgtgcctggccAGGAGCATAAATTTAG-TTGG----TGACAACGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcccacctgtaatcccagcatttggga-ggctgaggcaggcagatcacttgagcccc s panTro5.chr3 200040343 538 + 202621043 AATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTTTTTGCCAGAATACAGAATAATA--ATAAAtttattatttttgttttt---------atttttttgagatggagt---ctca--ttgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcccgggttcaagtga-ttctcctgcctcagcctcccaagcagctggggttacaggcgcatgccaccatgcctggctaa-ttttgtattttcagtggagatggggtttcaccatgttggccgggctggtctcaaac-cccgacctcaagtgaaccacccaccttggccttccaaagtgctagga----ttacaggcatgagccactgtgcctggccAGGAGCATAAATTTAG-TTGG----TGAAAACGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcccacttgtaatcccagcatttggga-ggctgaggcaggcaaatcacttgagcccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 22844 536 + 190779 AATATGCTGATGGCTGTGATCACTGCTCAGAAGTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTTTTTGCCAGAATACAGAATAATA--ATAAAtttattattttg--tttt---------atttttttgagatggagt---ctca--ttgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcccgggttcaagtga-ttctcctgcctcagcctcccaagcagctggggttacaggcgcatgccaccatgcctggctaa-ttttgtattttcagtggagatggggtttcaccatgttggccgggctggtctcgaac-cccgacctcaagtgaaccacccaccttggccttccaaagtgctagga----ttacaggcatgagccactgtgcctggccAGGAGCATAAATTTAG-TTGG----TGACAACGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcccacctgtaatcccagcatttggga-ggctgaggcaggcaaatcacttgagcccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 877669 535 - 880730 AATATGGTGATGGCTGTGATCACTGCTCAGAACTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATACGAATCCATGTTTGCCAGAATACAGAATAATA--ATAAAtttattattttt---------------aattttttgagatggagt---ctga--ctgtcccccaggctagagtgcagtgttgcgatctcagctcactgcaacctctgcctcccaggttcaagtgatttctcctgcctcagcctcccaagcagctggggttacaggcgcgtgccaccgtgcccggctaa-ttttgtattttcagtaaagacggggtttcaccatgttggccggg-tggtctcgaactcctgacctcaagtgaaccacccacctcagcctcccataatgccagaa----ttacaggcatcagccactgtgcccggccAGT-GCATAAATTTAGTTTGG----TGACAGCGAGTTTTAATTAGAATAGAAgccaggtggcagtggctcccacctgtaatcctaacatttgggagggctgaggcaggcagatcacttgagcccc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120798472 539 + 123690457 AATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTCTTTGCCAGAATACAGAATAATA--ATAAAtttattgtttttattttt---------atttttttgagatggagt---ctca--ctgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcctgggttcaagtga-ttctcctgcctcagcctcccaagtagctgggattacagacgcatgccaccatgcctggctaa-ttttgcattttcaatagagacggggtttcaccatgttggccgagctggtctcgaactcctgacctcaagtgaaccacccaccttggcctcccaaagtgctagga----ttacaggcaggagccactgtgcctgaccAGGAGCATAAATTTAG-TTGG----TGACAATGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcccacctgtaatcccagcatttggga-ggctgaggcaggcagatcacttgagcccc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 221589 537 + 180051392 AATATGCTGATGGCTGTGATCACTGCTCGGAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCGAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAATTTATCACttttattttt---------atttttttgagatggagt---ct----ctgtcccccaggctggaatgcaatggcgcgatctcagctcactgcaagctctgcctccagggttcaagtga-ttctcctgcctcagcctcccaagcagctgggattacagacgcacgccaccgtgcctggctaa-ttttgtattttcagtagagtt-gggtttcaccatgttggccgggctggtcttgaactcgtgacctcaagtgaaccacctacctcaacctcccaaagtgctagga----ttacaggcgtgagccactgcgcctagccAGTAGTATAAATTCAG-TTGG----TCACAATGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcacgcctgtaatcccagcatttggga-ggctgaggcaggcagatcacttgagcct- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180293706 537 - 181584905 AATATGCTGATGGCTGTGATCACTGCTCGGAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCGAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAATTTATCACttttattttt---------atttttttgagatggagt---ct----ctgtcccccaggctggaatgcaatggcgcaatctcagctcactgcaagctctgcctccagggttcaagtga-ttctcctgcctcagcctcccaagcagctgggattacagacgcacgccaccgtgcctggctaa-ttttgtattttcagtagagtt-gggtttcaccatgttggccgggctggtcttgaactcgtgacctcaagtgaaccacctacctcaacctcccaaagtgctagga----ttacaggcgtgagccactgcgcctagccAGTAGTATAAATTCAG-TTGG----TCACAATGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcacgcctctaatcccagcatttggga-ggctgaggcaggcagatcacttgagcct- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 45731 538 - 100774 AATATGCTGATGGCTGTGATCACTGCTCGGAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCGAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAATTTATCACttttattttt---------atttttttgagatggagt---ct----ctgtcccccaggctggaatgcaatggcgcaatctcagctcactgcaagctctgcctccagggttcaagtga-ttctcctgcctcagcctcccaagcagctgggattacagacgcacgccaccgtgcctggctaa-ttttgtattttcagtagagttggggtttcaccatgttggccgggctggtcttgaactcgtgacctcaagtgaaccacctacctcaacctcccaaagtgctagga----ttacaggcgtgagccactgcgcctggccAGTAGTATAAATTCAG-TTGG----TCACAATGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcacacctgtaatcccagcatttggga-ggctgaggcaggcagatcacttgagcct- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204162 540 + 218577 AATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAAAA--ATAAAtttattatttttattttt---------atttttttgagatagagt---ctcg--ctgtcccccaggctgaagtgcagtggcgcgatctcagctcactgcaagctctgcctcctgggttcaagtga-ttctcctgcctcatcctcccaagcaggtgggattacagacgcatgccaccatgcctggctaa-ttttgtattttcagtagagttggggtttcaccatgttggccgggctggtcttgaactcgtgacctcaagtgaaccacctacctcaacctcccaaagtgctagga----ttacaggcatgagccactgtgcctagccAGTAGTATAAATTCAG-TTGG----TCACAATGAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcacgcctctaatcccagcatttggga-ggctgaggcaggcagatcacttgagcct- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625039 541 - 91010382 AATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTCTTGCCTCCTTGTACATATTTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAAtttttaatttttattttt---------atttttttgagatgaagt---cttg--ctgtcccccaggctgaagtgcagtggcgcgatctcagctcactgcaagctctgcctcccgggttcaagtga-ttctcctgcctcagcctcccaagcaggtgggattacagatgcatgccaccatgcctggctaa-ttttgtattttcagtagagttggggtttcaccatgttggccgggctggtcttgaactcctgacctcaagtgaaccacacacctcggcctcccaaagtgctggga----ttacaggcgtgagccactgtgcctggccAGTAGCATAAATTCAG-TTGG----TCACAACAAGTTTTAATTAGAATAGAAgccaggt-gcagtggctcacacctgtaatcccagcatttggga-ggctgaggcaggcagatcacttgatccc- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162396 515 - 204313951 AATATGCTGATGGCTGTAGTCCCTGCTCAGAACTTGTTC-TTCCTCCTTGTACAGT-GTAAGAGTCTTTCCTGCAAAGTACATGAATCCGTGTTTGCCAGAATACAG-ATAGTAGCATACAtttattattatta--------------ttatttttgagatgaagtagtctcgctctgtcacctaggctggagtgcagtggtgcgatcttggctcactacaacttccacctcccaggttcaagcga-ttctcctgcctcagcctcctgagtagctaggactacaggtgcacaccatcacacctggctaatttttgtatttttagtagagacagggtttcaccatgttgtccag---------------------------gaaccactcaccttggcttcccaaagtgctagga----ttataggcgtgagccactgtgccctgccAGTAGCATAAATTTAG-TGGA----TCACAGCAAGTTTCAATTAGAATATAAgccaggc-acagtggctcacacctataatcccagcatttggga-ggctgaggcaggcagatcacttgagcccc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 123729 548 - 16417988 AGTATGCTGATGGCTGT-----------AGAACTTGTTC-TTCCTCTTTGTACATA-TTAAGAGTCTTTCTTGCAAAGTATATGAATCTGTGTTTGCCAGAATACAG-ACAGTAGTATACATTTTTTAttattattattttattatttttatttttgagttgaagtaggctcgctctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacttctacctcccaggttcaagcga-ttctcctgcctcagcctcctgagtatctaggactacaggtgcataccaccacacccggctaatttttgtatttttagtagagacaggatttcaccatgttgtccaggctggtcttgaac-cctgacctcaagtgaaccacttaccttggcttcccaaagtgctaggattacttacaggcgtgagccactatgccctgccAGTAGCATAAATTTAG-TTGA----TCACAACAAGTTTTAATTAGAATATAAgccaggc-acagtgggtcacacctataatcccagcatttggga-ggctgaggcaggcagatcacttgagcccc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 226476 551 + 306014 AATATGCTGATGGCTATAGTCACTGCTCAGAACTTGTTC-TTCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCTGTGTTTGCCAGAATATGG-ATAGTAATATACATTTATTAttattattattattttgttattatctttgaaatgaagtagtctcgctctgtcacccaggctggagtgcagtggtgcaatcttggctcattgcaacttccaccttctaggttcaagcga-ttctcctgcctcagcctcctgagtatctgggactacaggtgcacaccaccatacccggctaatttttgtatttttagtagagacagggtttcaccatgttgtccaggctggtcgtgaac-cctgacctcaagtgaaccactcaccttggcttcccaaagtgctgggattacttacaggcgtgagccactgtgccctgccAGTAGCATAAATTTAG-TTTAGTTGTCACAACAAGTTTTAATTAGAATATAAgccaggc-acagtggc------------tcccagcatttggga-ggccgaggcaggcagatcacttgagcccc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 86362 555 + 211231 AATATGCTGATGGCTGTAGTCACTGCTCAGAACTTGTTC-TTCTTCCTTGTACATG-TTAAGAGTCTTTCCTGAAAAGTATATGAATCCGTGTTTGCCAGAATACAG-ATAGTAGCATACATTTATTAttattattttatttttattattatttttgagatgaagtaggctcgctctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctccccctcccaggttcaaggga-ttctcctgcctcagcctcctgagtatctaggactacaggcacataccaccacacccggctaatttttgtatttttagtagagacagggtttcaccacgttgtccaggctggtcttgaactcctgacctcaagtgaaccactcaccttggcttcccaaagtgctagga----ttacaggcgtgagccactgtgccctgccAGTAGCATAAATTTAG-TTGA----TCACAACAAGTTTTAATTAGAATATAAgccaggc-acagtggctcacacctataatcccagcatttggaa-ggc-gaggcaggcagatcacttgagcccc i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 53792 381 + 2165740 I e mm10.chr13 46096794 581 - 120421639 I e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e colAng1.NW_012116910v1 899144 1949 + 1687011 M e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=1086528.000000 s hg38.chr3_KI270779v1_alt 53687 177 + 205312 ggagttctagaccagcctgggcaacatggcgaaacctgtctctacaa-aa---attaaaaaattagccaggcgtggtggtacacacctgaggtaccagctgctcaggaggctgaggcaggatgattga-ttgagcccgggaagtcaa-ggctct-ggcgagctgtgatcacaccattgcgctcc s panTro5.chr3 200040881 177 + 202621043 agagttctagaccagcctgggcaacatggcgaaacctgtctctacaa-aa---attaaaaaattagccaggcgtggtggtacacacctgacgtaccagctgctcaggaggctgaggcaggatgagtga-ttgagcccgggaagtcaa-ggccct-ggcgagctgtgatcacaccattgcgctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23380 177 + 190779 agagttctagaccagcctgggcaacatggcgaaacctgtctctacaa-aa---attaaaaaattagccaggcgtggtggtacacacctgaggtaccagctgctcaggaggctgaggcaggatgagtga-ttgagcccgggaagtcaa-ggctct-ggcgagctgtgatcacaccattgcgctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878204 180 - 880730 ggagttctagaccagcctgggcaacatggcgaaacctgtctctacaa-aa---attaaaaaattagccaggcgtggtggtacacacctgacgtaccagctgctcaggaggctgaggcaggatgagtgatttgagcccgggaagtcaagggctctgggcaagctgtgatcacaccattgcactcc i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799011 173 + 123690457 agacttctagaccagcctgggcaacatggcgaaacctgtctctacaa-aa---attaaaaaattagccaggtgtggtggtacatgcctgaagtaccagctgctcaggaggctgaggcaagatga-----ttgagcctgggaagtcaa-gtctcc-ggcgagctgtgctcacaccattgcactcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222126 150 + 180051392 ggagttctagaccatgctgggcaacatggcgaaacctgtctctacac---------aaaaaattagccaggcgtggtggtacatg------------------caggaggctgaggcagga----tga-ttgagcctggaaagtcaa-ggctcc-agcaagctgtgatcacaccactgcactcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294243 150 - 181584905 ggagttctagaccagcctgggcaacatggcgaaacctgtctctacac---------aaaaaattagccaggcgtggtggtacgtg------------------caggaggctgaggcagga----tga-ttgagcctgggaagtcaa-ggctcc-agcaagctgtgatcacaccactgcactcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46269 150 - 100774 ggagttctagaccatcctgggcaacatggcgaaacctgtctcgacac---------aaaaaattagccaggcgtggtggtacgtg------------------caggaggctgaggcagga----tga-ttgagcctgggaagtcaa-ggctcc-agcaagctgtgatcacaccactgcactcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204702 150 + 218577 ggagttctagaccagcctgggcaacatggtgaaacctgtctctacac---------aaaaaattagccaggcgtggtggtacgtg------------------caggaggctgaggcagga----tga-ttgagcccgggaagtcaa-ggctcc-agcaagctgtgatcacaccactgcactcc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625580 160 - 91010382 ggagttctagaccagcctgggcaacatggcgaaacctgtctctacacaaa---aataaaaaattagccaggcgtggtggtacgca------------------caggaggctgaggcaggatgattga-ttgagccggggaagtcaa-ggctcc-agcgagctgtgatcacaccactgcactcc i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901093 160 + 1687011 ggagttgtagaccagcctgggcaacatggcgaaacctgtctctacacaaa---aataaaaaattagccaggcgtggtggtacgcg------------------caggagactgaggcaggatgattga-ttgagcccgggaagtcaa-ggctcc-agcaagctgtgatcacaccactgcactcc i colAng1.NW_012116910v1 M 1949 C 0 s calJac3.chr2 162911 151 - 204313951 agagttctagaccagcttgggcaacatggcaaaacctgtctctaaaaaaaaagaataaaaaatta-----------------------------ccagctgctcaggaggctgaggcaggatgagtga-ttgagctggga-agtcaa-ggctcc-agtgagctgtgatatcaccactgcactcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124277 150 - 16417988 agagttctagaccagcttgggcaacatgacaaaacctgtctcttaaaaaaaa-aataaaaaatta-----------------------------ccagctgctcaggagactgagg-aggatgtttga-ttgagctggggtagtcaa-ggctcc-ggtgagctgtgatcccaccactgcactcc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227027 148 + 306014 agagttctagaccagcttgggcaacatggcaaaacctgcctctaaaaaaa---aataaaaaatta-----------------------------ccagctactcaggaggctgagg-aggatgattga-ttgagctggggaagtcaa-ggctcc-ggtgagctgtgatcccaccactgcactcc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 86917 149 + 211231 ggagttctagaccagcttgggcaacatggcaaaacctgtctctaaaaaaa---aataaaaaatta-----------------------------ccagctgctcaggaggctgaggcaggatgattga-ttgagctggggaagtcaa-ggctcc-ggtgagctgtgatatcaccactgcactcc i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 53792 381 + 2165740 I e mm10.chr13 46096794 581 - 120421639 I e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=341571.000000 s hg38.chr3_KI270779v1_alt 53864 41 + 205312 agcccaggtgacatagcgagaccctgtctcaaaagagaaaa s panTro5.chr3 200041058 40 + 202621043 agcccaggtgacatagcgagaccctgtctcaaaaga-aaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23557 40 + 190779 agcccaggtgacatagcgagaccctgtctcaaaagg-aaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878384 40 - 880730 agcccaggtgacatagcgagaccctgtctcaaagaa-aaaa i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799184 40 + 123690457 agcccaggtgacatagcgagaccctgtctcaaaaga-aaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222276 40 + 180051392 agcctgggtgacattgcgagagcctgtctcaaaaga-aaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294393 40 - 181584905 agcctgggtgacattgcgagagcctatctcaaaaga-aaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46419 40 - 100774 agcctgggtgacattgcgagagcctgtctcaaaaga-aaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204852 40 + 218577 agcccgggtgacattgcgagagcctgtctcaaaaga-aaaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625740 40 - 91010382 agcctgggtgacatagcgagagcctgtctcaaaaga-aaaa i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901253 40 + 1687011 agcccaggtgacatagcgagagcctgtctcaaaaga-aaaa i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163062 40 - 204313951 agcccacgtgacatagcgagatcctgtctcaaaaga-aaga i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 124427 40 - 16417988 agcccacgtgacatagcgagaccctgtctcaaaaga-aaaa i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 227175 38 + 306014 agtccacgtgacacagtgagaccctgtctcaaa--a-aaga i cebCap1.NW_016108150v1 C 0 I 1 s aotNan1.NW_018494784v1 87066 40 + 211231 agcccacgggacatagcgagaccccgtctcaaaaga-aaaa i aotNan1.NW_018494784v1 C 0 I 153 s mm10.chr13 46097375 36 - 120421639 agccagggcaatgtagagagaccctgtctcaaaaca----- i mm10.chr13 I 581 C 0 e otoGar3.GL873745 53792 381 + 2165740 I e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=-11349.000000 s hg38.chr3_KI270779v1_alt 53905 8 + 205312 aaaG----TGTT s panTro5.chr3 200041098 8 + 202621043 aaaG----TGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23597 8 + 190779 aaaG----TGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878424 8 - 880730 aaaG----TGTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799224 5 + 123690457 a-------TTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222316 4 + 180051392 --------aTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294433 4 - 181584905 --------aTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46459 4 - 100774 --------TTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204892 4 + 218577 --------atgt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625780 8 - 91010382 caaG----TTTT i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901293 8 + 1687011 acaa----TTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163103 5 - 204313951 -------TTTTT i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 124468 11 - 16417988 -gaaTTTTTTTT i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 227214 4 + 306014 --------TTTT i cebCap1.NW_016108150v1 I 1 C 0 s mm10.chr13 46097411 8 - 120421639 aaaG----CCCA i mm10.chr13 C 0 C 0 e otoGar3.GL873745 53792 381 + 2165740 I e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e aotNan1.NW_018494784v1 87106 153 + 211231 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=81775.000000 s hg38.chr3_KI270779v1_alt 53913 14 + 205312 Ttt---aataaaaacag s panTro5.chr3 200041106 14 + 202621043 Ttt---aataaaaacag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23605 14 + 190779 Ttt---aataaaaacag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878432 14 - 880730 TTT---AATAAAAACAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799229 14 + 123690457 TTT---AATAAAAACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222320 16 + 180051392 TTT-TAAATAAAAACAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294437 16 - 181584905 TTT-TAAATAAAAACAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46463 16 - 100774 TTT-TAAATAAAAACAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204896 17 + 218577 tttaaaaataaaaaCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625788 16 - 91010382 TTT-TAAATAAAAACAG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901301 16 + 1687011 TTT-AAAATAAAAACAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163108 16 - 204313951 TTA-AAAATAGAAACAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124479 16 - 16417988 TTT-TAaatagaaacac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227218 16 + 306014 TTT-TAAATAGAAACAT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 54173 14 + 2165740 -TT-TAAATAAAGCAA- i otoGar3.GL873745 I 381 C 0 s mm10.chr13 46097419 14 - 120421639 TTT-AAATTAAAAAT-- i mm10.chr13 C 0 C 0 e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e aotNan1.NW_018494784v1 87106 153 + 211231 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=1444915.000000 s hg38.chr3_KI270779v1_alt 53927 177 + 205312 gctgaaagaaaa-gatgg-------aggtagtctcccagcgcttggagc-aaaaagacaaa----gTATTTGATA---AACTCT--TAGGTACATAAAGGA---TGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTC--ACTGCTGGCTGCACAT-CGCTGGCCAGCCATGTGGCCTCTGTGGGTTCTG-AACGTG s panTro5.chr3 200041120 177 + 202621043 gctgaaagaaaa-gatgg-------aggtagtctcccagcgcttggagc-aaaaagacaaa----gTATTTGATA---AACTCT--TAGGTACATAAAGGA---TGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTC--ACTGCTGGCTGCACAT-CGCTGGCCAGCCATGTGGCCTCTGTGGGTTCTG-AACGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23619 177 + 190779 gctgaaagaaaa-gatgg-------aggtagtctcccagcgcttggagc-aaaaagacaaa----gTATTTGATA---AACTCT--TAGGTACATAAAGGA---TGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTC--ACTGCTGGCTGCACAT-CGCTGGCCAGCCATGTGGCCTGTGTGCGTTCTG-AACGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878446 180 - 880730 GCTGAAAGAAAG-GATTG-------AGGTAGTCTCCCAGCACTTGGAGCAAAAAAGACAAA----GTATTTGATA---AACTCT--AAGGTACATCAAGGA---TGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTCA-ACTGCTGGCTGCACAT-CGCTGGCCAGCCATGTGGCCTCTGTGCGTTCTGAAACGTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799243 177 + 123690457 GCTGAAAGAAAG-GATTG-------AGGTAGTTTCCTAGTGCATGGAGC-AAAAAGACAAA----GTATTTGATA---AACTCT--TAGGTACATAAAGGA---TGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTC--GCTGCTGGCTGCACAC-CCCTGGCCACCCATGTGTCCTCTGTGGGTTCTG-AACCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222336 185 + 180051392 GCTGAAAGAAAA-GATTGAGGTAGTAGGTAGTCTCCCAGCGCATGCAGC-AGAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGG---TGTCTAAGGGAACGTGCGGACACGGAT----TACTCTGGACTC--ACTGCTGGCTGCACACCCCCCGACCAGCCATGTGGCCTCCGTGGGTTCTG-AACATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294453 185 - 181584905 GCTGAAAGAAAA-GATTGAGGTAGTAGGTAGTCTCCCAGCGCATGCAGC-AGAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGG---TGTCTAAGGGAACGTGCGGACACGGAT----TACTCTGGACTC--ACTGCTGGCTGCACACCCCCTGACCAGCCATGTGGCCTCCTTGGGTTCTG-AACATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46479 185 - 100774 GCTGAAAGAAAA-GATTGAGGTAGTAGGTAGTCTCCCAGCGCAAGCAGC-AGAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGG---TGTCTAAGGGAACGTGCGGACACGGAT----TACTCTGGACTC--ACTGCTGGCTGCACACCCCCTGACCAGCCATGTGGCCTCCTTGGGTTCTG-AACATG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 204913 181 + 218577 GCTGAAAGAAAA-GATTGAGGTAGAAGGTAGTCTCCCAGCGCATGCAGC-AGAAAGACAAA----G----TGGTA---AACTCT--TAGGTACATAAAGGG---TGTCTAAGGGAACGTGCGGACACGGAT----TACTCTGGACTC--ACTGCTGGCTGCACATCCCCCGACCAGCCATGTGGCCTCCGTGGGTTCTG-AACATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625804 185 - 91010382 GCTGAAAGAGAA-GATGGAGGTAGTAGGTAGTCCCCCAGCGCGTGCAGC-AGAAAGACAAA----GTATTTGGTG---AACTCT--CAGGTACATAAAGGG---TGTCTGAGGGAACGTGCGGACACGGAT----TCCTCTGGACTC--ACTGCTGGCTGCACACCCCCTGGCCAGCCATGTGGCCTCCGTGGGTTCTG-AACATG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901317 185 + 1687011 GCTGAAAGAAAA-GATTGAGGTAGTAGGTAGTCTCCCAGCGCATGCAGC-AAAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGA---TGTCTAAGGGAACATGTGGACACGGAT----TACTCTGGACTC--ACTGCTGGCTGCACACCCCCTGGCCAGCCATGTGGCCTCCGTGGGTTCTG-AACATG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163124 174 - 204313951 GCTGAAAGAAAA-GATTG-------AGGTGGTCACCCAGAGCATGGGGT-AAAAAGACAAA----GTATCTGATA---AACTCT--TAGGTACATGAAGGA---TGTCT-AGGGAAAATGCAGGCATGGAT----TACCCTGGACTC--ACTGCTGGCTGCAC---CGCTGACCAGCTATGTGGCCTCAGTGGATTCTG-AGCATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124495 175 - 16417988 gctgaaagaaat-ggttg-------aggtagtctcccagagcatggagt-aaaaagacaaa----gTATCCGATA---AACTCT--TAGGTACATGAAGGA---TGTCTAAGGGAAAATGCAGGCATGGAT----TACTCTAGACTC--ACTGCTGACCTCAC---CACTGGCCAGCCACGTGGCCTCAGTGGATTTGG-AGCATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227234 171 + 306014 GCTGAAAGAAAA-GGTT---------GGTAGTCTCCCAGAGCATGGAGT-AAAAAGTCAAA----GTATCTGATA---AACTCT--TAGGTACATGAAGGA---TGTCTAAGGGAAAATGCGGGCATGGAT----TACTCTGGACTC--ACTGCTGGCTGCAC---CGCTGGCCAGCCATGTGGCCCC--TGGATTCGG-AGCATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87259 174 + 211231 GCTGAAAGAACA-GATTG-------AGGTCGTCTCCCGGAGCATGGAGT-AAGAAGACACA----GTATCTGAT----AACCCC--TAGGTCCATGGAGGA---TATCTAAGGGAAAATGCAGGCATGGGT----TACTCTGGACTC--ACCGCTGGCTGCAC---CGCTGGCCAGCCATGTGGCCTCAGTGGATTCGG-AGCACG i aotNan1.NW_018494784v1 I 153 C 0 s otoGar3.GL873745 54187 174 + 2165740 ACAGAAAGAAAAGGGTTG-------AGGCAGTCTCCCAGAGTACAGAGT-AAAAAAACAA-------------CA---AACTTT--GAGGTACATAAAGGATTTTATCTAATAGAAAATACAGAAATGGAT----TACTCAGGACCCACACTGCTGGCTTCAAAC-TTCTGACCAGCTTTATAGCCTTGGTAGGTTCTG-AACTTG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46097433 152 - 120421639 GCTGAAGAGAAA-AGCTG-------ACGAAATCTC--AGTGCATGGAGT-CAAAGGAAAAATGACGTAAGTGATATTTAATTCTAATATCTACTTACAGAG---C-TGTGAGAGAAAATGCAGAAGTGGATGTTGTACATTTG---C--ATTCCTGGCTCTAAAG-CCC--------------------------TTTG------- i mm10.chr13 C 0 C 0 e dasNov3.JH577625 560417 1562 + 913073 I e canFam3.chr34 30185228 1614 - 42124431 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=275710.000000 s hg38.chr3_KI270779v1_alt 54104 36 + 205312 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG s panTro5.chr3 200041297 36 + 202621043 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23796 36 + 190779 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878626 35 - 880730 TTGATG-GTGCCAACCTCCT-GGCTGAAG------TGGAAATG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799420 36 + 123690457 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222521 29 + 180051392 TTGATG-GTGCCG-------GGGCTGAAG------TGGAAATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294638 29 - 181584905 TTGATG-GTGCCG-------GGGCTGAAG------TGGAAATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46664 29 - 100774 TTGATG-GTGCCG-------GGGCTGAAG------TGGAAATG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205094 29 + 218577 TTGATG-GTGCCG-------GGGCTGAAG------TGGAAATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89625989 29 - 91010382 TTGATG-GTGCCG-------GGGCTGATG------TGGAAATG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901502 29 + 1687011 TTGATG-GTGCCA-------GGGCTGAAG------TGGAAATG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163298 36 - 204313951 TTGATG-GTGCCAGCCTCCTGGGCTGAAG------TGAAAATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124670 36 - 16417988 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227405 36 + 306014 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87433 36 + 211231 TTGATG-GTGCCAACCTCCTGGGCTGAAG------TGGAAATG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 54361 42 + 2165740 TCAATG-GTGCCAGCTTCATCCGCTAAAGTGAACATGAACATG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46097585 29 - 120421639 -TCATA-GTGTTTACTTCCTGGGCTTGTC------TG------ i mm10.chr13 C 0 C 0 s dasNov3.JH577625 561979 35 + 913073 TTGATGAATACAGACCTCATAGGTTGTAG--------GATTTG i dasNov3.JH577625 I 1562 C 0 e canFam3.chr34 30185228 1614 - 42124431 I e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=670470.000000 s hg38.chr3_KI270779v1_alt 54140 75 + 205312 GAATGGGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG s panTro5.chr3 200041333 75 + 202621043 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23832 75 + 190779 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878661 74 - 880730 GAATGAGTTCTA-GGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799456 75 + 123690457 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTGTTGCTCTGTTAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222550 75 + 180051392 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294667 75 - 181584905 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46693 75 - 100774 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205123 75 + 218577 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTCCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626018 75 - 91010382 GAATGAGTTCTAGGGCAT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i chlSab2.chr4 C 0 C 0 s colAng1.NW_012116910v1 901531 75 + 1687011 AAATGAGTTCTAGGGCGT-------------CTGTCTCT---------TAG--ATCATTTTAAT--GTTTGCTGTGT--TTTTT--CTGTATTGCTCTGTTAGAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163334 74 - 204313951 GAATGAGTTCTAGGCCAT-------------GTGTCTCT---------TAC--GTCATTTTAAT--GTTTGCTGTG---TTTTT--CTGTATTGCTCTGTTAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124706 74 - 16417988 GAATGAGTTCTAGGCCAT-------------GTGTCTCT---------TAG--GTCATTTTGGT--GTTTGCTGTG---TTTCT--CTGTATTGCTCCATTAGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227441 74 + 306014 GGATGAGTTCTAGGCCTT-------------GTGTCTCT---------TAC--GTCATTTTAGT--GTTTGCTGTG---TTTCT--CTGTATTGCTCTGTTAGAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87469 73 + 211231 GAATGAGTTCTA-GCCAT-------------GTGTCTCT---------TAC--ATCATTTCAAT--GTTTGCTGTG---TTTCT--CTGTATTGCTCTGTTAGAC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 54403 84 + 2165740 GAAGAGGTCCTGGGGTAT-------------GGGAGGCTGGTCTTATGTGT--GTAGTTTCAAT--GCTAGACATGT--TTGCTGATTACATTGCT--GTTGGAG i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46097614 41 - 120421639 ------------------------------------------------TGC--ATC--TTTAAT--ATTTTCTGTGG--TTTTA--GTGTTGTTCTCTG------ i mm10.chr13 C 0 C 0 s canFam3.chr34 30186842 92 - 42124431 GAGTGGGATCCAGGGGATTCACATCAGACTAGTCTCTCA---------TGT--ATCATTTTAATGAGTTTGCCATGT--TTTCCAGTTATATTGCCCTATTAGAG i canFam3.chr34 I 1614 C 0 s dasNov3.JH577625 562014 81 + 913073 GGGTGAGACATGTCAGAC-------------CAGCCTCA---------CAAGTGTCGTTTTAATGAGCTTGCCATTTGATCTCT--TTAGACTGCTCCACTAGAC i dasNov3.JH577625 C 0 C 0 e manLeu1.NW_012101728v1 20403 4520 - 74206 M a score=2204429.000000 s hg38.chr3_KI270779v1_alt 54215 155 + 205312 TAATGAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-AGATTGA---TGAGTATGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGTG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTCGGCACTGGGAAGGT-CAGTGT s panTro5.chr3 200041408 155 + 202621043 TAATGAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATCGA---TGAGTACGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 23907 155 + 190779 TAATGAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATCGA---TGAGTACGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878735 157 - 880730 TAATGAGAAATT--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGCGGGATTGA---TGAGTATGATCACTCCAAGCCCATGCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTAGAGGAAGCACACCCTGTCCTATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799531 155 + 123690457 TAATGAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCGTCAGGTGT-GGATTAA---TGAGTGCGATCACTCCAAGCCCATCGAGGGGAAACAGAAGAAGCCCTTTGAGAAG-CACTGGAGGAAGCACACCCTGTCCTATTTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222625 155 + 180051392 TAATAAGATA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCTTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180294742 155 - 181584905 TAATAAGATA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCTTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46768 159 - 100774 TAATAAGATA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTTGGATTGAGTAGCATTACTCAAGGACCATCCAGGGGCAACAGAAGAAGCCTTTTGAGGAGCCACTGGA-GAAGCACACCCTGTCCTATGTGGACCGTCAGCACTGGGAAGGT-CAGTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205198 155 + 218577 TAATAAGATA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626093 155 - 91010382 TAATAAGATA-C--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTACGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 24923 155 - 74206 TAATAAGATA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCATATGTGGA-CGTCAGCACTGGGAAGGT-CAGTGT i manLeu1.NW_012101728v1 M 4520 C 0 s colAng1.NW_012116910v1 901606 155 + 1687011 TAATGAGATA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTACGTGGA-CATCAGCACTGGGAAGGT-CAGTGT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163408 155 - 204313951 TAATAAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTACGATTACTCCAAACCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTGGGCACTGGGAAGGT-CAGTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124780 155 - 16417988 TAATAAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTATGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTGGGCACTGGGAAGGT-CAGTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227515 155 + 306014 TAATAAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATTGA---TGAGTATGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTGGGCACTGGGAAGGT-CAGTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87542 155 + 211231 TGATAAGAAA-T--------------GTGA------------TGGTGTT----------------------T--------------------CTGGCCTCAGGTGC-GGATCGA---TGAGTACGATTACTCCAAGCCCGTTCAGGGGCAACAGAAGAAGCCCTTCGAGGAG-CACTGGAGGAAGCACACCCTGTCCTATGTGGA-CGTGGGCACTGGGAAGGT-CAGTGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 54487 152 + 2165740 ---TAAGAAG-T--------------GTGT------------TGGCATT----------------------T--------------------CTGGCC-CAGGTGC-GGATTGA---CGAGTATGATTATTCCAAGCCCATCCAAGGACAGCAGAAGAAGCCCTTTGGGGAG-CATTGGAGGAAGCACACCCTTTCTTACGTTGA-TGTGAGCACTGGCAAGGTACAGTGC i otoGar3.GL873745 C 0 I 303 s mm10.chr13 46097655 152 - 120421639 --GTGAGAGA-T--------------GGAG------------GTATGTT----------------------T--------------------TT-ACCTCAGGTGC-GGGTCGA---TGAGTATGATTACTCCAAGCCCATCCAGGGACAGCAGAAGAAGCCGTTTGGGGAA-CACTGGAGGAAGCACACCCTCTCATATGTGGA-CATCAAGACTGGCAAGGT-ATGTGG i mm10.chr13 C 0 C 0 s canFam3.chr34 30186934 189 - 42124431 AAATAAGAAA-TTTGAAGTGTATTTGTTGA------------TGGTATT----------------------TTCTGAAATAAACTAATTTCCCTGGCCTCAGGTGC-GGATTGA---CGAGTATGATTACTCTAAGCCCATCCAGGGACAGCAGAAGAAGCCGTTTGAGGAG-CACTGGAGAAAGCACACCCTTTCCTACGTCGA-TATCAAGACTGGGAAGGT-ATGTGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562095 186 + 913073 TAATGAGAAA-T--------------TTGGAATCTAACTGTCTGGTGTTGACTTGAGGTGACCTTGCTTCCT--------------------CTGGCCCTAGGTAC-GGGTTGA---TGAGTACGATTACTCTAAGCCCCTGGAAGGTCAACAGAAGAGACCATTCAAGGAC-CACTGGAGAAAGCACACCCTTTCCTACGTTGA-TGT---CACGGGGAAGGT-ATGTCC i dasNov3.JH577625 C 0 C 0 a score=158265.000000 s hg38.chr3_KI270779v1_alt 54370 19 + 205312 GGAGCTCGTTCTCACCACA s panTro5.chr3 200041563 19 + 202621043 GGAGCTCTTTCTCACCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24062 19 + 190779 GGAGCTCTTTCTCACCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878892 19 - 880730 GGAGCTCGTTCTCACCACA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799686 19 + 123690457 GGAGCTTGTTCTCACCACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222780 17 + 180051392 GGAA--TGTTCTCACCACA i rheMac8.chr6 C 0 I 33 s macFas5.chr6 180294897 19 - 181584905 GGAGCTCGTTCTCACCACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46927 19 - 100774 GGAGCTCGTTCTCACCACA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205353 19 + 218577 GGAGCTCGTTCTCACCACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626248 19 - 91010382 GGAGCTGGTTCTCACCACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25078 19 - 74206 GGAGCTCGTTCTCACCACA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 901761 19 + 1687011 GGAGCTCGTTCTCACCACA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163563 19 - 204313951 GGACTTTGTTCTCACCACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124935 19 - 16417988 GGACTTCGTTCTCACCACA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227670 19 + 306014 GGACTTTGTTCTCGCCACA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87697 19 + 211231 GGACTTTGTTCTCACCACG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46097807 10 - 120421639 -------GCATGCATCA-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30187123 19 - 42124431 GGAACGTGTCCTGCTCACG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562281 10 + 913073 ------AGTGCCCGCA--- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 54639 303 + 2165740 I a score=193503.000000 s hg38.chr3_KI270779v1_alt 54389 39 + 205312 GCCCA-GCACCCAC-----ACGGC-------CCCG-CCCAGGTCTGCGGGCTG s panTro5.chr3 200041582 39 + 202621043 GCCCA-GCACCCAC-----ACGGC-------CCCG-CCCAGGTCTGCGGGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24081 39 + 190779 GCCCA-GCACCCAC-----ACGGC-------CCCG-CCCAGGTCTGCGGGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878911 39 - 880730 GCCCA-GCACCCAC-----ACGGC-------CCCA-CCCAGGTCTGCGGGCTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799705 39 + 123690457 GCCCA-GCACCCAC-----ACGGC-------CCCA-CCCAGGTCTGCAGGCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180294916 39 - 181584905 ACCCA-AAATGCGC-----ACGGC-------CCTG-CCCAGGTTCACGGGCCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46946 36 - 100774 ACCC--AAATGCGC-----ACGGC-------CCTG-CCCAGGTTC-CGGG-CG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205372 39 + 218577 GCCCA-AAATGCGC-----ACGGC-------CCTG-CCCAGGTTCGCGGGCCG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626267 39 - 91010382 GCCCA-AAATGCGC-----ACGGC-------CCCG-CCCAGGTTCGCGGGCTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25097 39 - 74206 GCCCA-AAACGCGC-----ACGGC-------CCTG-CCCAGGTTCGCAGGCCG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 901780 39 + 1687011 GCCCA-GAACGCGC-----ACGGC-------CCCG-CCCAGGTTCGCGGGCTG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163582 31 - 204313951 G---------CCGC-----CCCGC-------CCCA-CCCAGGTCTGCAGGCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124954 39 - 16417988 GCCCG-ACATCCAC-----ATGGC-------CCCA-CCCAGGTCTGCAGGCTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227689 38 + 306014 GCCCG-ACACCCAC-----ACGGC-------CCCA-CCCAGGCCT-CAGGCTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87716 39 + 211231 GCCCG-GCACCCAC-----ACGGC-------CCCA-CCCAGGTCTGCAGGCTG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46097817 30 - 120421639 GCCCAGGGATGTGC-----TGAGC-------CACT-CT---ATTTG------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30187142 37 - 42124431 -------GATGCACTAATGACTGT-------GCCGTCCCATATATTCTAGA-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562291 38 + 913073 ---------GCTGC-----ACCGCAGTGGTGTTCG-TCCTGTTCTGCGGCTCA i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 54639 303 + 2165740 I e rheMac8.chr6 222797 33 + 180051392 I a score=793410.000000 s hg38.chr3_KI270779v1_alt 54428 95 + 205312 GCCTTGCTGATGGTGAACGCG---GAGGAGC-AGGCCAGATTTAAATCAACTCCCGACAGATTTGAGGC--ACCGCTGAAAAAGGCACTCTGACAGCAGTC s panTro5.chr3 200041621 95 + 202621043 GCCTTGCTGATGGTGAACACG---GAGGAGC-AGGCCAGATTTAAATCAACTCCGGACAGATTTGAGGC--ACCGCTGAAAAAGGCACTCTGACAGCAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24120 95 + 190779 GCCTTGCTGATGGTGAACGCG---GAGGAGC-AGGCCAGATTTAAATCAACTCCGGACAGATTTGAGGC--ACCGCTGAAAAAGGCACTCTGACAGCAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 878950 95 - 880730 GCCTTGCTGATGGTGAACGGG---AAGGAGC-AGGCCAGATTTAAATCACCTCCCGACAGATTTGAGGC--ACCACTGATAAAGGTACTCTGACAGCAGTC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799744 93 + 123690457 GCCTTGCTGATGGTGAACGGG---GAGGAGC-AGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGC--ACCACTGAAAAA-GCACTCTGAC-GCAGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222830 93 + 180051392 ACCTTGCTGATGGTGAACG-G---GAGGAGCAAGGCCAGATTTAAATC-ACTCCTGAACAGATTGAGGC--ACCACTGAAAAAGGC-CTCTGACAGCAGTC i rheMac8.chr6 I 33 I 38 s macFas5.chr6 180294955 94 - 181584905 ACCTTGCTGATGGTGAACGGG---GAGGAGC-AGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGC--ACCACTGAAAAAGGC-CTCTGACAGCAGTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 46982 96 - 100774 ACCTTGCTGAT-GTGAACGCG---GAGGAGC-AGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGCCACCCACTGAAAAAGGCACTCTGACAGCAGTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205411 95 + 218577 ACCTTGCTGATGGTGAACGGG---GAGGAGC-AGGCCGGATTTAAATCAACTCCTGACAGATTTGAGGC--ACCACTGAAAAAGGCACTCTGACAGCAGTC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626306 95 - 91010382 ACCTTGCTGATGGTGAACCGG---GAGGAGC-AGGCCGGATTTAAATCAACTCCTGACAGATTTGAGGC--ACCACTGAAACAGGCACTCTGACAGCAGTC i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25136 95 - 74206 ACCTTGCTGATGGTGAACGGG---GAGGAGC-AGGCCGGATTTAAATCAACTCCTGACAGATTTGAGGC--ACCACTGAAAAAGGCACTCTGACAGCAGTC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 901819 95 + 1687011 ACCTTGCTGATGGTGAACGGG---GAGGAGC-AGGCCAGGTTTAAATCAACTCCTGACAGATTTGAGGC--ACCGCTGAAAAAGGCACTCTGACAGCAGTC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 163613 90 - 204313951 GCCTTGCTGATGGTGAATGGG---GAGAAGC-AGGCCAGATTTAAGCCAGC-ACTGACAGATGTGAGGC--ACCACTGAGAAA-GCACTCTGTCAGTC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 124993 90 - 16417988 GCCCTGCTGATGGTGAACGGG---GAGGAGT-AGGCCAGATTTAAGCCAGC-GCTGACAGATGTGAGGC--ACCACCGAGAAA-GCACTCTGTCAGTC--- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227727 90 + 306014 GCCTTGCTGATGGTGCACAGG---GAGGAGC-AGGCCAGATTTAAGCCAAC-ACTGGCAGATGTGAGGC--ACCACTGAAAAA-GCACTATGTCAGTC--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87755 90 + 211231 GCCTTGCTGATGGTGAACGGG---GAGGAGC-AGGCCAGATTTAAGCCAAC-ACTGACAGATGTGAGGC--ACCACTGAAAAA-GCACTCCGTCAGTC--- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46097847 92 - 120421639 GCTTT--TGATGGTTGACCAGTTTAGAAAGC-AACCTAGTTTTAAACCAGTTGTTAACTGAACCAAGAT--ATCACTGAAAAAAAG----TAACGTGAGTC i mm10.chr13 C 0 C 0 s canFam3.chr34 30187179 86 - 42124431 GTACAACTTATGATGGGCTGG---GAGAAGC-AACATGGATTTAAGTC-CCTGTTGGCAGACCTGAGAC--ACTACTGAAAAGGACTCT-TGTT------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562329 62 + 913073 ------------GTGTTCGGT---GTGT-GC-GGCAGAGATTTAAATCCACTGC-GATGTGCTTGGAGC--ACCACCG------------TGTC------- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 54639 303 + 2165740 I a score=336361.000000 s hg38.chr3_KI270779v1_alt 54523 35 + 205312 GGGC-TTCGGGCTGGAAACAGAATCCAGTGCCTGCA s panTro5.chr3 200041716 35 + 202621043 GGGC-TTCGGGCTGGAAACAGAATCCAGTGCCTGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24215 35 + 190779 GGGC-TTCGGGCTGGAAACAGAATCCAGTGCCTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879045 36 - 880730 GGGCTTTCGGGCTGGAAACAGAATCCAGTGCCTGCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799837 35 + 123690457 AGGC-TTCGGGCTGGAGACAAAATCCAGTGCCTGCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295049 35 - 181584905 AGGC-TTCTGGCTGGAAACAGAATCCAGCGCCTGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47078 35 - 100774 AGCC-TTCTGGCTGGAAACAGAATCCAGCGCCTGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205506 35 + 218577 AGGC-TTCTGGCTGGAAACAGAATCCAGCGCCTGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626401 35 - 91010382 AGGC-TTCTGGCTGGAAACCGAATCCAGCGCCTGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25231 35 - 74206 AGGT-TTCTGGCTGGAAACAGAATCCAGCGCCTGCA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 901914 35 + 1687011 AGGC-TTCTGGCTGGAAACAGAATCCAGTGCCTGCA i colAng1.NW_012116910v1 C 0 I 1631 s calJac3.chr2 163703 34 - 204313951 AGGC-TTCTGGCCAGAAAC-GGATCCAGTGCCTGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125083 35 - 16417988 AGGC-TTCTGGCTGGAAACAGAATCCAGTGCCTGCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227817 35 + 306014 AGGC-TTCTGGCTAGAAACAGAATCCAGTGCCTGCC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87845 35 + 211231 AGGC-TTCTGGCTGGAAACAGAATCCAGTGCCTGTG i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46097939 33 - 120421639 ATGC-TTCTTGCTAGAAACAGAAACCAGTGCCTG-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30187265 34 - 42124431 GGGC-TTCTC-TTGGAAACAGAATCCAGTGTGGATG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562391 29 + 913073 AGGG-CTCCGCCTGGGAA--GAGTCCAGTGCA---- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 54639 303 + 2165740 I e rheMac8.chr6 222923 38 + 180051392 I a score=52774.000000 s hg38.chr3_KI270779v1_alt 54558 6 + 205312 GGTGGT- s panTro5.chr3 200041751 6 + 202621043 GGTGGT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24250 6 + 190779 GGTGGT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879081 6 - 880730 GGTGGT- i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799872 6 + 123690457 GGTGGT- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295084 6 - 181584905 GGTGGT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47113 6 - 100774 AGTGGT- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205541 6 + 218577 AGTGGT- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626436 6 - 91010382 GGTGGC- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25266 6 - 74206 AGTGGT- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 163737 6 - 204313951 AGTGGT- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125118 6 - 16417988 AGTGGT- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227852 6 + 306014 AGTGGT- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87880 6 + 211231 AGTGGT- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46097972 6 - 120421639 GGTGGT- i mm10.chr13 C 0 C 0 s canFam3.chr34 30187299 6 - 42124431 GGTGGT- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562420 6 + 913073 -GACGTC i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 54639 303 + 2165740 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e rheMac8.chr6 222923 38 + 180051392 I a score=40919.000000 s hg38.chr3_KI270779v1_alt 54564 3 + 205312 TCA s panTro5.chr3 200041757 3 + 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24256 3 + 190779 TCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879087 3 - 880730 TCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799878 3 + 123690457 TCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222961 3 + 180051392 TCA i rheMac8.chr6 I 38 C 0 s macFas5.chr6 180295090 3 - 181584905 TCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47119 3 - 100774 TCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205547 3 + 218577 TCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626442 3 - 91010382 TCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25272 3 - 74206 TCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 163743 3 - 204313951 TCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125124 3 - 16417988 TCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227858 3 + 306014 TCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87886 3 + 211231 TCA i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46097978 3 - 120421639 TCA i mm10.chr13 C 0 I 1 s canFam3.chr34 30187305 3 - 42124431 TTA i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562426 3 + 913073 TCA i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 54639 303 + 2165740 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=718602.000000 s hg38.chr3_KI270779v1_alt 54567 87 + 205312 GAGGAGCCTTAAGGAAGG---------------------G--TTGC-T--CTGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG s panTro5.chr3 200041760 87 + 202621043 GAGGAGCCTTAAGGAAGG---------------------G--TTGC-T--CCGTGGTGTGGGCCGGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24259 87 + 190779 GAGGAGCCTTAAGGAAGG---------------------G--TTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879090 86 - 880730 GAGGAGCCTTAAGGAAGG---------------------G--TTGC-T--CCGTGGTGTGGGCCAGATGGATGTCACT-GGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799881 87 + 123690457 GAGGAGCCTTAAGGAGGG---------------------G--TTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCCCTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 222964 88 + 180051392 GAGGAGCCTTAAGGAAAG---------------------GGCTTGCTT--CCGTGGTGT-GGCCAGATGGAAGTCCACTGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGC-GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295093 87 - 181584905 GAGGAGCCTTAAGGAAGG---------------------G--CTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGCGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47122 87 - 100774 GAGGAGCCTTAAGGAAGG---------------------G--CTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGCGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205550 87 + 218577 GAGGAGCCTTAAGGAAGG---------------------G--CTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGCGGG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626445 86 - 91010382 GAGGAGCCTTGAGGAAGG---------------------G--CTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCCCTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTG-GCGGG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25275 87 - 74206 GAGGAGCCTTAAGGAAGG---------------------G--CTGC-T--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGCGGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 163746 86 - 204313951 GAGGAGCCTT-AGGAAGG---------------------G--TTGC-T--CCGTGGTGTGGGCCAAATGGAAGTCACTGGACAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125127 86 - 16417988 GAGGAGCCTT-AGGAAGG---------------------G--CTGC-T--CCGTAGTGTGGGCCAGATGGAAGTCACTGGACAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227861 86 + 306014 GAGGAGCCTT-AGGAAGG---------------------G--TTAC-T--CCGTAGTGTGGGCCAGATGGAAGTCACTGGACAG-GAGCAAGCGTCCAAGGCCTGGTGGCAGGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87889 85 + 211231 GAGGAGCCTT-AGGAAGG---------------------G--TTGC-T--CCATGGTGTGGGCCAGATGGAAGTCACTGGACAG-GAGCAAGTGTCCAAGGCCTGGTGGCA-GG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 54942 104 + 2165740 GAGGAGCAGTAAGGAAGACTGGAATACCTTTTATCTGCCA--TAGC-T--CCTTTCTCTGAGCC----GTTGGCCCTTGGACGG-GTGCACATGTGGTAACCATGGTTGCAGGC i otoGar3.GL873745 I 303 I 292 s mm10.chr13 46097982 89 - 120421639 GGGGACCCTTAGTATAGG---------------------A--CTGG-TTCTCATCTTCTGTACCAGGTGAAGAGCACTGGGCAATAATCAGATGTCTGATGCTT-GTGGTAGGG i mm10.chr13 I 1 C 0 s canFam3.chr34 30187308 61 - 42124431 -------------GAAGT---------------------G--CTGG-T--CTTCCA-------CAGTTGTAG--CACCTGGCAG-G---GAGTGCCCAAGGCTTGGTGGCAGG- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562429 31 + 913073 GGAGGGCCTC-ACGGAGG---------------------G-------C--CTGTGGCATGGG---------------------------------------------------- i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=139160.000000 s hg38.chr3_KI270779v1_alt 54654 17 + 205312 GAGGAGATGATGATTGT s panTro5.chr3 200041847 17 + 202621043 GAGGAGATGATGATTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24346 17 + 190779 GAGGAGATGATGATTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879176 17 - 880730 GAAGAGATGATGATTAT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799968 14 + 123690457 GAGGA---GATGATTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223052 16 + 180051392 GAGGAGATGAGGA-TGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295180 17 - 181584905 GAGGAGATGAGGATTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47209 17 - 100774 GAGGAGATGAGGATTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205637 17 + 218577 GAGGAGATGAGGATTGT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626531 17 - 91010382 GAGGAGATGAGGATTGT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25362 17 - 74206 GAGGAGATGAGGATTGT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 163832 17 - 204313951 GAGGAGACAATGATTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125213 17 - 16417988 GAGGACACGATGATTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227947 17 + 306014 GAGGAGACAATGATTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87974 17 + 211231 GAGGAGACGATGATTGT i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46098071 16 - 120421639 -AGTTAGTGGTGACTAT i mm10.chr13 C 0 I 262 s canFam3.chr34 30187369 15 - 42124431 --GGAGAGGATGATTCT i canFam3.chr34 C 0 I 1 e otoGar3.GL873745 55046 292 + 2165740 I e dasNov3.JH577625 562460 0 + 913073 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=1493472.000000 s hg38.chr3_KI270779v1_alt 54671 201 + 205312 GGACCTAGCGAGAAAGTCAGCATCTGTGTGGTGGGG--ACAGAGCCACTACCAGAAACC-AGTCCCGAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCTTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAGGGGAGCAGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA s panTro5.chr3 200041864 201 + 202621043 GGACCTAGCGAGAAAGTCAGCATCTGTTGGGTGGGG--ACAGAGCCACTACCAGAAACC-AGTCCCGAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAAGGGAGCTGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24363 201 + 190779 GGACCTAGCGAGAAAGTCAGCATCTGTGGGGTGGGG--ACAGAGCCACTACCAGAAACC-AGTCCCGAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAAGGGAGCTGATGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879193 200 - 880730 GGACCTAGTGAGAA----AGCATGTGTGGGGTGGGG--ACACAGCCACTACCAGAAACCAAGTCCCGAGCCAAGGGAGCCCAGAAGAGACCCCTTCCCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAGGGGAGCTGAGGGATGTTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120799982 201 + 123690457 GGACCTAGCGAGAAAGTCAGCATCTGTAGGGTGGGG--ACACAGCCACTACCAGAAACC-AGTCCCATGCCAAGAGAGCCCGGAAGAGACCCCT--CCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCGCCTGCAGGGGAGCTGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i nomLeu3.chr11 C 0 I 214 s rheMac8.chr6 223068 190 + 180051392 GGACTTAGGGAGAAAGTCAGCGTCTGTGGGTGGGGA--CCACAGCCACTACCAGAAACC-GAGCCCAAGCCA--GGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCTTGGGCTGG-CCAGCTGGAAGCATCTGCA-GGGAGCCGA-GGGATG----GCAGCGCTTAGCATCCCCT-GGCACTGAGCAA-CAGAGAAGGGAAGG i rheMac8.chr6 C 0 I 7 s macFas5.chr6 180295197 201 - 181584905 GGACTTAGGGAGAAAGTCAGCGTCTGTGGGGTGGGG--ACACAGCCACTACCAGAAACC-AGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCTTGGGCTGGCCCAGCTGGAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTGCAGCGCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i macFas5.chr6 C 0 I 5 s macNem1.NW_012013899v1 47226 201 - 100774 GGACTTAGGGAGAAAGTCAGCGTCTGTGGGGTGGGG--ACACAGCCACTACCAGAAACC-AGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCTTGGGCTGGCCCAGCTGGAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i macNem1.NW_012013899v1 C 0 I 5 s cerAty1.NW_012004452v1 205654 203 + 218577 GGACTTAGGGAGAAAGTCAGCGTCTGTGGGGTGGGGACACACAGCCACTACCAGAAACC-AGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCTTGGGCTGGCCCAACTGCAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGCGAAGG i cerAty1.NW_012004452v1 C 0 I 5 s chlSab2.chr4 89626548 203 - 91010382 GGACTTAGGGAGAAAGTCAGCGTCTGTGGGGTGGGGACACACAGCCACTACCAGAAACC-AGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCTTGAGCTGGCCCAACTGGAAGCATCTGCACGGGAGCCGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i chlSab2.chr4 C 0 I 5 s manLeu1.NW_012101728v1 25379 203 - 74206 GGACTTAGGGAGAAAGTCAGCGTCTGTGGGGTAGGGACACACAGCCACTACCAGAAACC-AGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCT--CCCCTCTCCTCCCTTGGGCTGGCCCAACTGCAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGCGAAGG i manLeu1.NW_012101728v1 C 0 I 5 s calJac3.chr2 163849 199 - 204313951 AGACCTAGCAAGAA-GTCAAGGTCTG--GGGTGGGGACACTCAGCCACTACCAGAAACC-TGTCCCAAGCCAAGGGAGCCCAGAAGAGACCACT--CCCCTCTCTTCCCACAGGCTGGGCCACCTGGAAGCAGCAGCAGGGAAGCTGAGGGG-TGCGGTGCAGCCCTTAGCCTCCCTTGGGCACTGAGCAAGCAGAGAAGGGCAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125230 199 - 16417988 AGACCTAGCGAGAA-GTCAAGGTCTG--GGGTGGGGACACACAGCCACTACCAGAAACC-TGTCCCAAGCCCAGGGAGCCCAGAAGAGACCACT--CCCCTCTGTTCCCACGGGCTGGGCTACCTGGAAGCAGCAGCAGGAGAGCTGAGGGG-TGCGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAGGCAGAGAAGGGCAGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 227964 191 + 306014 AGACCTAGCGAGAA-GTCAAGGTCTG--GGGTGGGGACACACAGCCACTACCAGAAACC-TGTCCCAAGCCAAGGGAGCCCAGAAGAGACTGCT--CCCCTCTCTTCCCATGGGCTGGGCCACCTGGAAGCAGC--------AGCTGAGGGG-TGCAGTGCAGCCCTTAGCCTCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 87991 198 + 211231 AGACCTAGCGAGAA-GTCAAGGTCTG--AGGTGGGGACACACAGCCACTACCAGAAACC-TGTCCCAAGCC-AGGGAGCCCAGAAGAGACCGCT--CCCTTCTCTTCCCACGGGCTGGGCCACCTGGAAGCAGCAGCAGGGGAGCTGAGGGG-CGCAGTGCAACCCTTAGCCTCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30187385 135 - 42124431 GAGCCCAATGAGAG---CAGGTCGTG--GGGTGGGG--GCA-------------------AG--------------------GTGGGGGGCATT------------------GGCTGGACCATCTGGAGGCAGCCTCA-GGGAACACGGAGTATGCTGTGTAGCCCACAGCATGGGCCCAGCACAGAGCAAGCAGAGGAG------ i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 562460 77 + 913073 --------------------------------------------------------------------------------------------------------------------GCGTAATGCAGAAGCAGCCTC---GGAGCCCAGGTGATGGGGTCCAGCCCCCAG---------GGCACAGGGC-GGCAGAGAGAGACAGG i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 55046 292 + 2165740 I e mm10.chr13 46098087 262 - 120421639 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=50605.000000 s hg38.chr3_KI270779v1_alt 54872 8 + 205312 -----AATGGAGG s panTro5.chr3 200042065 8 + 202621043 -----AATGGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24564 8 + 190779 -----AATGGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879393 8 - 880730 -----AATGGAGG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800397 8 + 123690457 -----AATTGAGG i nomLeu3.chr11 I 214 C 0 s rheMac8.chr6 223265 8 + 180051392 -----AATTGAGG i rheMac8.chr6 I 7 I 27 s macFas5.chr6 180295403 8 - 181584905 -----AATTGAGG i macFas5.chr6 I 5 C 0 s macNem1.NW_012013899v1 47432 8 - 100774 -----AATTGAGG i macNem1.NW_012013899v1 I 5 C 0 s cerAty1.NW_012004452v1 205862 8 + 218577 -----AATTGAGG i cerAty1.NW_012004452v1 I 5 C 0 s chlSab2.chr4 89626756 8 - 91010382 -----AATTGAGG i chlSab2.chr4 I 5 C 0 s manLeu1.NW_012101728v1 25587 8 - 74206 -----AATTGAGG i manLeu1.NW_012101728v1 I 5 C 0 s calJac3.chr2 164048 8 - 204313951 -----AAGTGAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125429 8 - 16417988 -----AAGTAAGG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 228155 8 + 306014 -----AAGTGAGG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88189 8 + 211231 -----AAGTGAGG i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 562537 11 + 913073 GACTCACTGGA-- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 55046 292 + 2165740 I e mm10.chr13 46098087 262 - 120421639 I e canFam3.chr34 30187520 0 - 42124431 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=105816.000000 s hg38.chr3_KI270779v1_alt 54880 18 + 205312 CAGGGTTGGGGTAAGCAG s panTro5.chr3 200042073 18 + 202621043 CAGGGTTGGGGTAAGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24572 18 + 190779 CAGGGTTGGGGTAAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879401 18 - 880730 CAGGGTTGGGGTAAGCAG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800405 18 + 123690457 AGGGGTTGGGGTAAGCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295411 18 - 181584905 AGGGGTTGGGGTAAGCAG i macFas5.chr6 C 0 I 18 s macNem1.NW_012013899v1 47440 18 - 100774 AGGGGTTGGGGTAAGCAG i macNem1.NW_012013899v1 C 0 I 15 s cerAty1.NW_012004452v1 205870 18 + 218577 AGGGGTTGGGGTGAGCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626764 18 - 91010382 AGGGGTTGGGGTGAGCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25595 9 - 74206 AGGGGTTGA--------- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164056 18 - 204313951 AGCGGGTTGGGTGAGCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125437 18 - 16417988 AGGGGGTTGGGTGAGCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 228163 18 + 306014 AGGGGGTTAGGTGAGCAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88197 18 + 211231 AGGGGGTTGGGTGAGCAG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30187520 16 - 42124431 --GGGGTGCAGTGGGCAG i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 55046 292 + 2165740 I e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562548 0 + 913073 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e rheMac8.chr6 223273 27 + 180051392 I a score=20281.000000 s hg38.chr3_KI270779v1_alt 54898 5 + 205312 CGTCC s panTro5.chr3 200042091 5 + 202621043 CGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24590 5 + 190779 CGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879419 5 - 880730 CGTCC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800423 5 + 123690457 CATCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295447 5 - 181584905 TGTCC i macFas5.chr6 I 18 C 0 s cerAty1.NW_012004452v1 205888 5 + 218577 TGTCC i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 164074 5 - 204313951 CGTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125455 5 - 16417988 GGTCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 228181 5 + 306014 GATTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88215 5 + 211231 CGTCC i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30187536 5 - 42124431 AGTCC i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 55046 292 + 2165740 I e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562548 0 + 913073 C e macNem1.NW_012013899v1 47458 15 - 100774 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 25604 0 - 74206 C e chlSab2.chr4 89626782 0 - 91010382 C e rheMac8.chr6 223273 27 + 180051392 I a score=-41354.000000 s hg38.chr3_KI270779v1_alt 54903 48 + 205312 TGGGAACAGCCA----------GCCGAGGGTGTGGTAGGG----GGGTTGCAGCTTGTTCCA s panTro5.chr3 200042096 48 + 202621043 TGGGAACAGCCA----------GCCAAGGGTGTGGTAGGG----GGGTTGCAGCTTGTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24595 48 + 190779 TGGGAACAGCCA----------GCCAAGGGTGTGGTAGGG----GGATTGCAGCTTGTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879424 8 - 880730 TGGGAACA------------------------------------------------------ i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800428 7 + 123690457 TGGGAAC------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295452 48 - 181584905 TGGGAACAGCCA----------GCCAAGGGTGTGGTAGGG----GGGTTGCAGCCTTGTTCC i macFas5.chr6 C 0 T 56 s cerAty1.NW_012004452v1 205893 40 + 218577 TGGGAACAACCA----------GCCAAGGGTGTGGTAGGG----GGTTTGCAGC-------- i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626782 15 - 91010382 ------------------------AGGGTTTGTGGTGAG----------------------- i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25604 6 - 74206 ---------------------------------GGTGAG----------------------- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164079 39 - 204313951 TGGTAACAGCCA----------GCCGAGGGTGTG-CTGGA----GGCTTGCAGC-------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125460 39 - 16417988 TGGTAACAGCCA----------GCCGAGGGTGTG-CTGGG----GGCTTGCGGG-------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 228186 39 + 306014 T-GTAATAGCCA----------GCCGAGGGTGTGCCTGGG----GGCTTGCAGC-------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88220 39 + 211231 TGGTAACAGCCA----------GCCAAGGGTGTG-CTGGG----GGCTTGCAGC-------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 55338 49 + 2165740 TGGGCACAGCAGAAACATAGACACTGAAGAGGAGCTGGAG---TGGGCTGTG---------- i otoGar3.GL873745 I 292 C 0 s canFam3.chr34 30187541 4 - 42124431 TGGG---------------------------------------------------------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562548 39 + 913073 CGGGAAAATCCA----------GCTCAGGCTGCAATATGAGCGTGTCCT------------- i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e macNem1.NW_012013899v1 47458 15 - 100774 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e rheMac8.chr6 223273 27 + 180051392 I a score=1989.000000 s hg38.chr3_KI270779v1_alt 54951 8 + 205312 CACAAGCA s panTro5.chr3 200042144 8 + 202621043 CACAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24643 8 + 190779 CACAAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s otoGar3.GL873745 55387 6 + 2165740 CACTAG-- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562587 0 + 913073 C e canFam3.chr34 30187545 0 - 42124431 C e aotNan1.NW_018494784v1 88259 0 + 211231 C e cebCap1.NW_016108150v1 228225 0 + 306014 C e macNem1.NW_012013899v1 47458 15 - 100774 I e calJac3.chr2 164118 0 - 204313951 C e saiBol1.JH378155 125499 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 25610 0 - 74206 C e chlSab2.chr4 89626797 0 - 91010382 C e cerAty1.NW_012004452v1 205933 0 + 218577 C e macFas5.chr6 180295500 56 - 181584905 T e rheMac8.chr6 223273 27 + 180051392 I e nomLeu3.chr11 120800435 0 + 123690457 C e gorGor5.CYUI01015759v1 879432 0 - 880730 C a score=141532.000000 s hg38.chr3_KI270779v1_alt 54959 40 + 205312 CAGCGTCTTGGGAACAGCCAGCCGAGGGTGTGGTAGGGGG s panTro5.chr3 200042152 40 + 202621043 CAGCGTCTTGGGAACAGCCAGCCGAGGGTGTGGTAGGGGG i panTro5.chr3 C 0 I 130 s panPan2.chrUn_NW_014024201v1 24651 40 + 190779 CAGCGTCTTGGGAACAGCCAGCCGAGGGTGTGGTAGGGGG i panPan2.chrUn_NW_014024201v1 C 0 I 130 s gorGor5.CYUI01015759v1 879432 25 - 880730 ---------------AGCCAGCTGAGGGTGTGGTAGGGGG i gorGor5.CYUI01015759v1 C 0 I 2 s nomLeu3.chr11 120800435 25 + 123690457 ---------------AGCCAGCCGAGGGTGTGGTAGGGGG i nomLeu3.chr11 C 0 I 1 s rheMac8.chr6 223300 38 + 180051392 CAGCGTCCTGGGAACAGCCAGCCAAGG--GTGGTAGGGGG i rheMac8.chr6 I 27 I 1 s macFas5.chr6 180295444 40 - 181584905 CAGTGTCCTGGGAACAGCCAGCCAAGGGTGTGGTAGGGGG i macFas5.chr6 T 56 I 1 s macNem1.NW_012013899v1 47473 40 - 100774 CAGTGTCCTGGGAACAGCCAGCCAAGGGTGTGGTAGGGGG i macNem1.NW_012013899v1 I 15 I 1 s chlSab2.chr4 89626797 40 - 91010382 CAGCGTCCTGGGAACAGCCAGCCAAGGGTGTGGTAGGGGG i chlSab2.chr4 C 0 I 1 s manLeu1.NW_012101728v1 25610 40 - 74206 CAGTGTCCTGGGAACAACCAGCCAAGGGTGTGGTAGGGGG i manLeu1.NW_012101728v1 C 0 I 1 s otoGar3.GL873745 55393 30 + 2165740 ----------GGGGTGGCCTGTTAAGGTTGCAGTAAAAGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30187545 27 - 42124431 -------------ACAGCCAGCTTAGGTTGCAGTAGAGCC i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562587 0 + 913073 C e aotNan1.NW_018494784v1 88259 0 + 211231 C e cebCap1.NW_016108150v1 228225 0 + 306014 C e calJac3.chr2 164118 0 - 204313951 C e saiBol1.JH378155 125499 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e cerAty1.NW_012004452v1 205933 0 + 218577 C a score=20475.000000 s hg38.chr3_KI270779v1_alt 54999 6 + 205312 TTGCAG s panTro5.chr3 200042322 6 + 202621043 TTGCAG i panTro5.chr3 I 130 C 0 s panPan2.chrUn_NW_014024201v1 24821 6 + 190779 TTGCAG i panPan2.chrUn_NW_014024201v1 I 130 C 0 s gorGor5.CYUI01015759v1 879459 6 - 880730 TTGCAG i gorGor5.CYUI01015759v1 I 2 C 0 s nomLeu3.chr11 120800461 6 + 123690457 TTGCAG i nomLeu3.chr11 I 1 C 0 s rheMac8.chr6 223339 6 + 180051392 TTTCAG i rheMac8.chr6 I 1 C 0 s macFas5.chr6 180295485 6 - 181584905 TTGCAG i macFas5.chr6 I 1 I 10 s macNem1.NW_012013899v1 47514 6 - 100774 TTGTAG i macNem1.NW_012013899v1 I 1 I 1 s chlSab2.chr4 89626838 6 - 91010382 CTGCAG i chlSab2.chr4 I 1 I 1 s manLeu1.NW_012101728v1 25651 6 - 74206 TTGCAG i manLeu1.NW_012101728v1 I 1 I 1 s otoGar3.GL873745 55423 2 + 2165740 TT---- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30187572 6 - 42124431 TCACAG i canFam3.chr34 C 0 I 1 e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562587 0 + 913073 C e aotNan1.NW_018494784v1 88259 0 + 211231 C e cebCap1.NW_016108150v1 228225 0 + 306014 C e calJac3.chr2 164118 0 - 204313951 C e saiBol1.JH378155 125499 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e cerAty1.NW_012004452v1 205933 0 + 218577 C a score=28402.000000 s hg38.chr3_KI270779v1_alt 55005 9 + 205312 C-TTGTTCCA s panTro5.chr3 200042328 9 + 202621043 C-TTGTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24827 9 + 190779 C-TTGTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879465 8 - 880730 C--TGTTCCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800467 10 + 123690457 CCTTGTTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223345 8 + 180051392 -CTTGTCCA- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 47521 9 - 100774 -CTTGTTCCA i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 205933 9 + 218577 -CTTGTTCCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626845 9 - 91010382 -CTTGTTCCA i chlSab2.chr4 I 1 C 0 s manLeu1.NW_012101728v1 25658 9 - 74206 -CTTGTTCCA i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 164118 9 - 204313951 -CCTGTTCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125499 8 - 16417988 -CC-GTTCCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 228225 9 + 306014 -CCTGTTCGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88259 9 + 211231 -CCTGTTCCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 55425 3 + 2165740 --CTG----- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30187579 9 - 42124431 -CTTATTCCA i canFam3.chr34 I 1 C 0 s dasNov3.JH577625 562587 9 + 913073 -CTCGTTCCA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e macFas5.chr6 180295491 10 - 181584905 I a score=575759.000000 s hg38.chr3_KI270779v1_alt 55014 70 + 205312 C-ACAAGCACAGTTCACCTGTGTGGCA-TTTCCAC-TGGGCATTG-AGATT--CAGAAATCATGAAGATAGAAAG---C s panTro5.chr3 200042337 70 + 202621043 C-ACAAGCACAGTTCACCCGTGTGGCA-TTTCTGC-TGGGCATTG-AGATT--CAGAAATCATGAAGATAGAAAG---C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24836 77 + 190779 C-ACAAGCACAGTTCACCCGTGTGGCT-ATTCTGCGTGGGCATTGTAGATTACAAGAAATCATGAAGATAAGAAAGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879473 72 - 880730 CAACAAGCACAGTTCACCCGTGTGGCATTTTCCGC-TGGGCATTG-AGATT--CAGAAATCATGAAGATAGAAAG---C i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800477 70 + 123690457 C-ACAAGCACAGTTCACCCGTGTGGCA-TTTCCGC-TGGGCATTG-AGATT--CAAAAATAATGAAGACAGAAAG---C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223353 68 + 180051392 C-ACAAGCACAGTTCACCTGTGTGGCA-TT--CGC-TGGCCATTA-AGATT--CAAAATAAATGAAGATAGAAAG---C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295501 70 - 181584905 C-ACAAGCACAGTTCACCTGTGTGGCA-TTTCCGC-TGGGCATTA-AGATT--CAGAAATAATGAAGATAGAAAG---C i macFas5.chr6 I 10 C 0 s macNem1.NW_012013899v1 47530 70 - 100774 C-ACAAGCACAGTTCACCTGTGTGGCA-TTTCCGC-TGGGCATTA-AGATT--CAGAAATAATGAAGATAGAAAG---C i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 205942 70 + 218577 C-ACAAGCACAGTTCACCTGTGTGGCA-TTTCCGC-TGGGCATTA-AGATT--GAGAAATAATGAAGATAGAAAG---C i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626854 70 - 91010382 C-ACAAGCACAGTTCACCTGTGTGGCA-TTTCCGC-TGGGCATTA-AGATT--CAGAAATAATGAAGATAGAAAG---C i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25667 70 - 74206 C-ACCAGCACAGTTCACCTGTGTGGCA-TTTCCGC-TGGGCATTA-AGATT--GAGAAATAATGAAGATAGAaag---c i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164127 69 - 204313951 C-GCAAGCGCAGTTCACC-ATGTGGCA-TTCCCAC-TGGGCATTA-AGATT--CAGAAATAATGAAGATGGAAAG---C i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 125507 69 - 16417988 C-CCAAGTGCAGTTCGCC-GTGTGGCA-TTGCCAG-TGGGCATTA-AGATT--CAGAAATAATGAAGATGGAAAG---C i saiBol1.JH378155 C 0 I 2205 s cebCap1.NW_016108150v1 228234 69 + 306014 C-GCAAGCGCAGTTCACC-ATGTGGCA-TTGCCAG-TGGGCATTA-AGATT--CAGAAATAATGAAGATGGAAAG---C i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88268 69 + 211231 C-GCAAGCGCAGTTCACC-GTGTGGCA-TCGCCAC-TGGGCATTA-AGATT--CAGAAATAATGAAGATGGAAAG---C i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 55428 57 + 2165740 C-TGAAGCATAATTCACCTGTGGAGCA-T-------TG--------AGATT--CAGAAATAATGAAGATACAAAG---T i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30187588 66 - 42124431 C-CAAAGCATAACTCATCCATTTGCCA-TTTCTGC-TGGACATTA-AGAAT--CAGAACT----AAGATATAAAG---T i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 562596 45 + 913073 C-TGAAGCGTAATTTAACCACTTGGCA-TTTGTGC-CCAGCATTG-AAT------------------------------ i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=1707724.000000 s hg38.chr3_KI270779v1_alt 55084 207 + 205312 TTTTACCCTTAAGCTTTTCATAA--CTT-----------------------------------GTAAGGGAGAG--TCGTATAATCACTTAGCTGTG-TCTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TGA-TTCA-GGCAGTGGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATAGTATAG----A--GAGGTCACACTTCACTCGCTTA-GCACAAGTCTATTTT--TAATG s panTro5.chr3 200042407 207 + 202621043 TTTTACCCTTAAGCTTTTCATAA--CTT-----------------------------------GTAAGGGAGAG--TCGTATAATCACTTAGCTGTG-TCTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TGA-TTCA-GGCAGTGGGTCATTTTCAGGATTTATCATGAAGGCCATTTCCTGATAGTATAG----A--GAGGTCACACTTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 24913 209 + 190779 TTTTACCCTTAAGTCTTTCATAAACTTG-----------------------------------GTAAGGGAGAG--TCGTATAATCACTTAGCTGTG-TCTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TGA-CTCA-GGCAGTGGGTCATTTTCAGGATTTATCATGAAGGCCATTTCCTGATAGTATAG----G--GAGGTCACACTTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879545 214 - 880730 TTTTATCCTTAAGCTTTTCATAA--CTT-----------------------------------GTAAGGGAGAGGTCAGTATAATCACTTAGCTGTGTTCTGTGGAAGTTACCTTTTGGGACTC-TCACTATCATCTA----------------GTGTGTCTG--TGA-TTCAGGGCAGTGGGTCATTTTCAGGATTTATCATGAAGGCCATTTCCTGGTAGTATAG----A--CAGGTCACACTTCACTCGCTTAGGCACAAGTCTATGTT--TAATG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800547 207 + 123690457 TTTTACCCTTAAGCTTTTCGTAG--CTT-----------------------------------GTAAGAGATAG--TCGTATAATCATTTAGCCATG-TTTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TTA-TTCA-GGCAGTAGGTCATTTTCAGGATTTATCATGAAGGCCATTTCTTGATACTGTAT----A--GAAATCACACTTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223421 207 + 180051392 TTTTACCCTTAAGCTTTTCGTAG--CTT-----------------------------------GTAAGAGATAG--TCGTATAATCACTTATCTGTG-TCTGTGGAAGTTACCTGT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TAA-TTCA-GGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----A--GAAATTACACCTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295571 207 - 181584905 TTTTACCCTTAAGCTTTTCGTAG--CTT-----------------------------------GTAAGAGATAG--TCGTATAATCACTTATCTGTG-TCTGTGGAAGTTACCTGT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TAA-TTCA-GGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----A--GAAATCACACCTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47600 207 - 100774 TTTTACCCTTAAGCTTTTCGTAG--CTT-----------------------------------GTAAGAGATAG--TCGTATAATCACTTATCTGTG-TCTGTGGAAGTTACCTGT--GGACTC-TCACTATCATCTA----------------GTGTGTCTG--TAA-TTCA-GGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----A--GAAATCACACCTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206012 240 + 218577 Ttttagccttaagcttttagtag--cttaaggctaaaagtttaagaggctgaaagctaaaagcgtaagAGATAG--TCGTATAATCACTTATCTGTG-TCTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTC----TAA-TTCA-GGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----A--GAAATCACACCTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89626924 204 - 91010382 TTTTACCCTTAAGCTTTTCGTAG--CTT-----------------------------------GTAAGAGATAG--TCGTATAATCACTTATCTGTG-TCTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTCT-----G-TTCA-GGCAGTAGGTCATTTTCAGAATTTGTCATGAAGGCCATTTCCTGATCGTATAT----A--GAAATCACACCTCACTCGCCTA-GCACAAGTCTGTTTT--TAATG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25737 242 - 74206 ttttagccttaagcttttagtag--cttaaggctaaaagtttaagaggctaaaagctaaaagcgtaagagataG--TCGTATAATCACTTATCTGTG-TCTGTGGAAGTTACCTTT--GGACTC-TCACTATCATCTA----------------GTGTGTCTC--TAA-TTCA-GGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----A--GAAATCACACCTCACTCGCTTA-GCACAAGTCTATTTT--TAATG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164196 205 - 204313951 TTTTACCCTTAAGCTTTTCATAG--CTT-----------------------------------GTAAGAGATAG--TTGTATAATCATTTACATGCG-TC--TGGCTGTTTCGTTT--GGGCTC-TCACTGTCATTTA----------------GTATGCCTG--TAA-TTCA-GGCAATCGGTCATTTTCAGGATTTATCATGAAGGCCATTTTCTGATAGTATAT----A--AAAATCACACTTCACTTGCTTA-GCGAAAGTCTGTTTT--TAACG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 228303 205 + 306014 TTTTACCTTTAAGCTTTTCATAG--CTT-----------------------------------GTAAGAGATAG--TTGTATAATCATTTACCTGTG-TC--TGGATGTTTCGTTT--GGACTC-TCACTATCATTTA----------------GTGTGTCTG--TAA-TTCA-GGCAATCGGTCATTTTCAGGATTTATCATGAAGGCCATTTTCTGATAGTATAT----A--AAAATCACACTTCACTTGCTTA-GCACAAGTCTGTTTT--TAATG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88337 205 + 211231 TTTTGCCCTTAAGCTTTTCATAG--CTT-----------------------------------GTAAGAGATAG--TTGTATAATCATTTACCTGTG-TC--TGGATGTTTCGTTT--GGACTC-TCACTATCATTTA----------------GTGTGTCTG--TAA-TTCA-GGCAATCGGTCATTTTCAGGATTTATCGTGAAGGCCATTTTCTGATAGTATAT----A--CAAATCACACTTCACTTGCTTA-GCACAAGTCTGTTTT--TAACG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 55485 217 + 2165740 TTCTACTGTTAAGCTTTTCATAG--CTT-----------------------------------ATAAGAGATAA--TCTTGTAATAATTTTCCTGTG-TCTACAGAAGTTAAG-AT--GAACTC-T-GCCATCACTTA---TGTAGTGTACCTCGTGTGTCTT--TAA-TTTA-GGCAGTTTGTCATTTTCAGAATTTATCATGAAGTCATTTTTCGAATAGTGTAT----A--GAAGTCAGACTTCACTTCTTTA-GCGC-TGCCTATTTT--TAATA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30187654 215 - 42124431 -GTTA--CTTGAGCTTTTCAGA---CTT-----------------------------------GTAAGGGAGAG--TCT--TAATCATTTATGTGAG-TCTACAGAAATAACG--T--GCTTTG-CTGCCATCACTTAA--TACAGAGAGCCTAGTGTGTCTG--TTATTTCA-AGTAGGCAGTAACTTTCATAATTTTGCGTGAAGGCTATTTTCTGACAGTGTATAGAAA--GAAATGAGACTT---TCTCTCG-GTACAGCCCTGTTTT--TAGTA i canFam3.chr34 C 0 I 3 s dasNov3.JH577625 562641 230 + 913073 TTTTGCCTGCAAGCTTTTCCTAA--CTT-----------------------------------GTAAGGGATGG--TCTTATTCTCATCTTTTGGGG-TCTAAAGAAATTAAATTG--GGTTTTGTCATCTTCACTTAATGTTTTGGGTGCCTGGTGTGTCTGTTTAA-CTCC-AGGAATCAGTAATTTTCAGAATTTATCATGAACACTACTCCCTGACAAAATAT----GTTTAAGTCAGGCTTCCCTCTCTTA-GCACAAGCCTATTTTAATAATG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=64088.000000 s hg38.chr3_KI270779v1_alt 55291 10 + 205312 TTTCCGGGTT s panTro5.chr3 200042614 10 + 202621043 TTTCCGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25122 10 + 190779 TTTCCGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879759 10 - 880730 TTTCCGGGTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800754 10 + 123690457 TTTCCAGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223628 10 + 180051392 TTTCCGGGTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295778 10 - 181584905 TTTCCGGGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47807 10 - 100774 TTTCCGGGTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206252 10 + 218577 TTTCCAGGTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627128 10 - 91010382 TTTCCGGGTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25979 10 - 74206 TTTCCAGGTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164401 10 - 204313951 TTTTGGGGTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 228508 10 + 306014 TTTTGGGGTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88542 9 + 211231 TTTT-GGGTT i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30187872 10 - 42124431 TTCAAGGGTT i canFam3.chr34 I 3 I 149 s dasNov3.JH577625 562871 3 + 913073 CTT------- i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 55702 0 + 2165740 C e mm10.chr13 46098087 262 - 120421639 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=83339.000000 s hg38.chr3_KI270779v1_alt 55301 12 + 205312 CAGG--ttttttgt s panTro5.chr3 200042624 12 + 202621043 CAGG--ttttttgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25132 12 + 190779 CAGG--ttttttgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879769 14 - 880730 CAGGttttttttgt i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800764 12 + 123690457 TGGG--ttttttgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223638 12 + 180051392 CGGG--ttttttgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295788 12 - 181584905 CGGG--ttttttgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47817 12 - 100774 CGGG--ttttttgt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206262 12 + 218577 CGGG--ttttttgt i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627138 12 - 91010382 CGGG--ttttttgt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 25989 12 - 74206 CGGG--ttttttgt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164411 13 - 204313951 TGGG-tttttttgt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 228518 13 + 306014 TGGG-tttttttgt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88551 13 + 211231 TGGG-TTtttttgt i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 562874 12 + 913073 GGGG--ttttttat i dasNov3.JH577625 C 0 I 125 e otoGar3.GL873745 55702 0 + 2165740 C e mm10.chr13 46098087 262 - 120421639 I e canFam3.chr34 30187882 149 - 42124431 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=1095251.000000 s hg38.chr3_KI270779v1_alt 55313 162 + 205312 tttgtttttgtt------gttctgagatagagtctcatctcttttgcccaggctgaaatgtggtggctcgatctcatctcactgcagcctcaacctcccctcggctcaggtgatcctcccacctcagcctccc-gggcacatgccaccatgcct-ggctaattttt-gtat s panTro5.chr3 200042636 162 + 202621043 tttgtttttgtt------gttctgagatagagtctcacctcttttgcccaggctgaaatgtggtggctcgatctcgtctcactgcaccctcaacctccccccggctcaggtgatcctcccacctcagcctccc-gggcacatgccaccatgcct-ggctaattttt-gtat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25144 162 + 190779 tttgtttttgtt------gttctgagatagagtctcatctttcttgcccaggctgaaatgtggtggctcgatctcgtctcactgcaccctcaacctccccccggctcaggtgatcctcccacctcagcctccc-gggcacatgccaccatgcct-ggctaattttt-gtat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879783 165 - 880730 tttgtttttgtt------gttgtgagatagagtctcatctcttttgcccaggctgaaatgtagtggctcgatctcgtctcactgcagcctcaacctccccctggctcaggtgatcctcccacctcagcctcccggggcacatgccaccatgcctgggctaatttttggtat i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800776 162 + 123690457 tttgtttttgtt------tttctgagatagagtctcatctctgttgcccaggctgaaatgtggtggctcgatctcgtctcactgcagcctcaacctcccgccggctcaggtgatcctcccacctcagcctccc-aggcacatgccaccatgcct-ggctaattttt-gtat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223650 151 + 180051392 tt-----------------ttctgagacagagtctcatctctgttgcccaggctgaaatgtggtggctcgatcttgtctcactgtagcctcaacctccccctggctcaggtgatcctcccacctcagcctccc-aggcacatgccaccatgcct-ggctaattttt-gtat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295800 149 - 181584905 tt-----------------ttctgagac--agtctcatctctgttgcccaggctgaaatgtggtgggtcgatcttgtctcactgcagcctcaacctccccctggctcaggtgatcctcccacctcagcctccc-aggcacacaccaccatgcct-ggctaattttt-gtat i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47829 151 - 100774 tt-----------------ttctgagacagagtctcatctctgttgcccaggctgaaatgtggtggctcgatcttgtctcactgtagcctcaacctccccctggctcaggtgatcctcccacctcagcctccc-aggcacacaccaccatgcct-ggctaattttt-gtat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206274 149 + 218577 tt-----------------ttctgagac--agtctcatctctgttgcccaggctgaaatgtggtggctcgatcttgtctcactgcagcctcaacctccccctggctcaggtgatcctcccacctcagcctccc-aggcacacgccaccatgcct-ggctaattttt-gtat i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627150 149 - 91010382 tt-----------------ttctgagac--agtctcatccctgttgcccaggctgaaatgtggtggctcgatcttgtctcactgtagcctcaacctccccctggctcaggtgatcctcccacctcagcctccc-aggcacacgccaccatgcct-ggctaattttt-gtat i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26001 149 - 74206 tt-----------------ttctgagac--agtctcatctctgttgcccaggctgaaatgtggtggctcgatcttgtctcactgcagcctcaacctccccctggctcaggtgatcctcccacctcagcctccc-aggcacacgccaccatgcct-ggctaattttt-gtat i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164424 158 - 204313951 tttgtttta---------tttctgagatagagtctca-ctctgttgcccaggctggaatgcagtggcttggtctcatctcactgcagcctcaacctcccccaggctcaagtgatcctcctgcctcagcctccc-aggcacgtgccaccatgcct-ggctaattttt-gtat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 228531 167 + 306014 tttgttttctttttgctttttctgaggtagagtctca-ttctgttgcccaggctggaatgcagtggcttggtctcatctcactgcagcctcaacctcccccaggctcaggtgatcctcccacctcaggctccc-aggcacatgccaccatgcct-ggctaattttt-gtat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88564 166 + 211231 tttcttttctttttgttttttctgagatagagtctca-ctctgttgcccaggctggaatgcagtggcttggtctcatctcactgcagcctcaacct-ccccaggctcaggtgatcctcccacctcagcctccc-aggcacgtgccaccatgcct-ggctaattttt-gtat i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 55702 0 + 2165740 C e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562886 125 + 913073 I e canFam3.chr34 30187882 149 - 42124431 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=3408092.000000 s hg38.chr3_KI270779v1_alt 55475 476 + 205312 gttttgtagagacg-gggttttgccacgttgcccaggctagtcttgagctcctgagctc--aagtgatccacctgtcttggcctccccaacaggcatgaaccaacacgcccagccAGtttcagtgatttttgaagaaatacatactcattttagaaagtacaaagagattgaaataagagctcactaaccagagatga-----cccattatggttt--aaatttcttt---------gtatatgtgcctaccttttcc---tgtgtgtgcatattta-atacacggcttgagtattccttctctgaaatccttgggaccagaagtgttttggatttcaggcttgttcagactttgga--atat-ttgcattacactta--ctgtctgag-catccttaatcggaagatctgactccatagcacatttcttttgaatg-tcatg-ctggtgctc-agaaagtttcaga-tttgggagaatttcagatgtttggattagggatgttctacc s panTro5.chr3 200042798 477 + 202621043 gttttgtagagacg-gggttttgccacgttgcccaggctagtcttgagctcctgagctc--aagtgatccacctgtcttggcctccccaacaggcatgaaccaacacgcccagccAGTTTCAGTGATTTTTCAAGAAATACATACTCATTTTAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAACCAGAGATGA-----CCCATTATGGTTT--AAATTTCTTT---------CTATATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATACATGGCttgagtattccttctctgaaatccttgggaccagaagtgttttggatttcaggcttgttcagactttgga--atat-ttgcattacactta--ctgtctgag-catccctaatcggaagatctgactccatagcacatttcttttgaatg-tcatg-ctggtgctctagaaagtttcaga-tttgggagaatttcagatgtttggattagggatgttctacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25306 476 + 190779 gttttgtagagacg-gggttttgccacgttgcccaggctagtcttgagctcctgagctc--aagtgatccacctgtcttggcctccccaacaggcatgaaccaacacgcccagccAGTTTCAGTGATTTTTCAAGAAATACATACTCATTTTAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAACCAGAGATGA-----CCCATTATGGTTT--AAATTTCTTT---------GTATATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATACATGGCttgagtattccttctctgaaatccttgggaccagaagtgttttggatttcaggcttgttcagactttgga--atat-ttgcattacactta--ctgtctgag-catccctaatcggaagatctgactccatagcacatttcttttgaatg-tcatg-ctggtgctc-agaaagtttcaga-tttgggagaatttcagatgtttggattaggaatgttctacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 879948 485 - 880730 gttttgtagagacgcggtttttcccacgttgcccaggccagtcttgagctcctgagcctcaaagtgatccacctgtcttggcctccccaacaggcatgaaacaacacgcccagccAGTTTCAGTGATTTTTCAAGAAATACATACTCATTTTAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAACCAGAGATGA-----CCCATTATGGTTTA-AAATTTCTTT---------GTATATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATACACGGCttgagtattccttctctgaaatccttgggaccagaagtgttttggattttaggcttgttcagactttgga--atatattgcattacactta--ctgtctgaaccatccctaatcggaacatctgactccatagcacatttcttttgaatgttcatgcccggtgctc-agaaagtttcagattttgggaggatttcagatgtttggattagggatgttcTAGC i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120800938 476 + 123690457 gttttgtagagacg-gggttttgccacgttgcccaggctggtcttgagctcctgagctc--aagtgatccacctgttttggcctccccaacaggcatgaacaaacacgcccagccAGtttcagtgatttttcaagaaatacatactcattttagaaagtacaaagagattgaaataagagctcactaacttgagatga-----cccattatggttt--aaatttcttt---------gtatctgcgcctaccttttcc---tgtgtgtgcatattta-atacatggcttgagtattccttctctgaaatccttgggaccagaagcgttctggatttcgggcttgttcagactttgga--atat-ttgcattatactta--ctgtctgag-catccctaatgggaagatctgactccatagcacatttcttttgaatg-gcatg-ttggtgctc-agaaagtttcaga-tttgggagaatttcagatgtttggattagggatgttcaacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 223801 467 + 180051392 gttttgtagagatg-gggtttcgccacgttgcctaggctagtcttgaactc----------tagtgatccacctgtcttgacctccccaacaggcatgaaccaacacgctcagccAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCAC-AACCAGAGATGA-----CCCATTATGGTTT--AAATTTCTTT---------GTATATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATATACAACttgagtattccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttgga--atat-ctgcatgatactta--ctgtctgag-cgtccccagtcggaagatctgactccatagcacatttcttttgaatg-tcatg-ttggtgctc-agaaagcttcaga-ttttggagaatttcagatttttgtattagggatgttcaacc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180295949 458 - 181584905 gttttgtagagacg-gggttttgccacattgcctaggctagtcttgaactc----------tagtgatccacctgtcttgacctccccaacaggcatgaaccaacacactcagccAGTTTTAGTGATTTTTCAAGAAACACATACTTATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCAC-AACCAGAGACGA-----CCCATTATGGTTT--AAATTTCTTT---------GTGTATGTGCCTACCTTTTCC---TGTGTGTGCATTTTTA-ATATACA--------attccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttgga--atat-ctgcatgatactta--ctgtctgag-cat-cccaatcagaagatctgactccatagcacatttcttttgaatg-tcatg-ttggtgctc-agaaagcttcaga-ttttggagaatttcagatttttgcattagggatgttcaacc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 47980 468 - 100774 gttttgtagagatg-gggttttgccacgttgcctaggctagtcttgaactc----------aagtgatccacctgtcttgacctccccaacaggcatgaaccaacacactcagccAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAACCAGATATGA-----CCCATTATGGTTT--AAATTTCTTT---------GTATATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATACACAACttgagtattccttctctgaaatccttgggaccagaagtgtttcggatttccggcttgttcagactttgga--atat-ctgcatgatactta--ctgtctgag-cgtccccagtcggaagatctgactccatagcacatttcttttgaatg-tcatg-ttggtgctc-agaaagcttcaga-ttttggagaatttcagatttttgtattagggatgttcaacc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206423 465 + 218577 gttttgtagagatg-ggg-ttcgccacgttgcctaggctagtcttgaactc----------aagtgatccacctgtcttgacctccccaacaggcatgaaccaacacgcttagccAGTTTTAGTGATTTTTCAAGAAATACATACTTATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCAC-AACCAGAGACGA-----CCCATTATGGTTT--AAATTTCTTT---------GTGTATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATACACAACttgagtattccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttgga--atat-ctgcatgatactta--ctgtctgaa-cgt-cccagtcggaagatctgactccatagcacatttcttttgaatg-tcatg-ttggtgctc-agaaagcttcaga-ttttggagaatttcagatttttgcattagggatgttcaacc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627299 462 - 91010382 gttttgtagagatg-gggtttcgccacgttgcctaggctagtcttgaactc----------aagtgatccacctgtcttgacctccccaacaggcatgaaccaacacgctcagccAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAACCAGAGACGA-----CCCATTATGGTTT--AAATTTCTTT---------GTGTGTGTGCCTACCTTTTCC---TGTGTGTGCATTTTTA-ATATACA--------attccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttggaatatat-ctgcatgatactta--ctgtctgag-tgtccccagtcggaagatctgactccatagcacatttcttttgaatg-tcatg-ttggtgctc-agaaagcttcaga-ttttggagaatttcagatttttggattagggatgttcaacc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26150 465 - 74206 gttttgtagagatg-ggg-ttcgccacgttgcctaggctagtcttgaactc----------aagtgatccacctgtcttgacctccccaacaggcatgaaccaacacgctcagccAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTCAGAAAGTACAGAGAGATTGAAATAAGAGCTCAC-AACCAGAGATGA-----CCCATTATGGTTT--AAATTTCTTT---------GTGTATGTGCCTACCTTTTCC---TGTGTGTGCATATTTA-ATACACAACttgagtattccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttgga--atat-ctgcatgatactta--ctgtctgag-cgt-cccagtcggaagatctgactccatagcacatttcttttgaatg-tcatg-ttggtgctc-agaaagcttcaga-ttttggagaatttcagatttttgcattagggatgttcaacc i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 164582 474 - 204313951 gttttgtagagaca-cggtttcaccatgttgcccagactagttttgaactcctgagctc----atgatccacctgccttggcctccccaaCAGGCATGAACCAACATGGCTGGCTAGTTTTGGTGATTTTTCAAGAAATACATACTCATTTTAGAAAGTACAAAGAGACTGAAATAAGAGCTCAGTAA-CAGAGAGGAGAGGGCCCATTATGGTTTT-GAG----TGT---------GTGTGTGTGTCTACCATTGAC---TCTGTGTGCATATTTA-GTACAcagcttgagtgttcc-tatctgaaatccttggggccagcagtgttttggatttccggcttgttcagactttgga--atat-ttgcattacactta--ctgtctgat-catccctaattggaagatctgactccatggtgcatttcttttgaatg-tcata-ttggtgctc-agaaagtttcaag-ttttggagaatttcagatttttggattagggatgttcaacc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 228698 463 + 306014 gttttgtagagaca-gggtttcaccatgttgcccagactagtcttgaactaccgagctc--cagtgatccacctgccttggcctcc--------------ccaaTATGGCTGGCTAGTTTTGGTGATATTTCAAGAAATACATACTCATTTTAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAATCAGAGATGA-----CCCATTATGGTTTT-AAGTTTCTTT---------ATATGCGTGTCTACCTTTTAC---TGTGCGTGCATATTTA-ATACAcagcttgagtattccttatctgaaatccctggggccagaagtgtttcggatttcaggcgtgttcagactttgga--atat-ttgcattatactta--ctgtctcac-catccctaattggaagatctgactccatggcacttttcttttgaatg-tcata-ttggtgctc-agaaagtttcaag-ttttggagaatttcagatttttggatcaaggatgttcaacc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 88730 472 + 211231 gttttgtagagaca-gggtttcaccatgttgcccagactagtcttgaactcctgagctc--aagtgatccacctgccttggcctcccCACCAGGCATGAACCAACATGGCTGGCGAGTTTTGGTGATTTTTCAAGAAATACATACTCATTTTAGAAAGTAC--AGAGATTGAAATAAGAGCTCACTAATCAGAGATGA-----CCCAGTATGGTTTC-AAGTTTCTTT---------GTATGTGTGTCCACCTTTTAC---TGTGTGTGCATATTTA-ATACAcagcttgagtattccttatctgaaatccttggggccagaa--gttttgggtttcaggcttgttcagactttgga--atag-ttgcattgtaccta--ctgtctgac-catccctaattggaaggtctgactccgtggcgcatttcttttgaatg-tcata-ttggtgctc-agaaagtttcaag-ttttggagaatttcacatttttggattagggatg-tcaacc i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 55702 371 + 2165740 ---------------------------------------------------------------------------------------------GCAT---------TGTTGGGGGGGTTT--GTGATTATAAAAGAA----ATGCTTATTTTACAAAGTAAAAAG-----GAAACAAAAGCCCATCAATCTGAGATAA-----CCCATTACCGTTTTGAAATATTTATAAGCTTTGAGTGTAGGTGTACACACTTTTCATTTATGTGTACAAATTTATGGATATGggttgagtatcccttctttgaaatttttaggatcaaaagtatttccggtttggaatatttttcgatttggga--atat-ttgcattatacttaaccagtggaag-----cctagtaag-------tgctccagtgagcctttc-ttcaagtg-tcagg-ttgctactc-agaatgtctcaga-ttttggagcacttgggaattttggattagggatattaaacc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562886 125 + 913073 I e canFam3.chr34 30187882 149 - 42124431 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=632724.000000 s hg38.chr3_KI270779v1_alt 55951 106 + 205312 tatataaatatttactttgaagt--agaaaaact----gg--aagtagatagtttaaaca----tgaagtgtcttggta-tagacaaggg-ttctcccacttttcatgatgggagcattt s panTro5.chr3 200043275 106 + 202621043 tATATAAATATTTACTTTGAAGT--AGAAAAACT----GG--AAGTAGATAGTTTAAACA----TGAAGTGTCTTGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGATGGGAGCATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25782 106 + 190779 tATATAAATATTTACTTTGAAGT--AGAAAAACT----GG--AAGTAGATAGTTTAAACA----TGAAGTGTCTTGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGATGGGAGCATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880433 112 - 880730 TATATAAATATTTACTTTGAAGTTAGAGAAAACT----GGGAAGGTAGATGGTTTGAATA----TCAAGTGTGTTGGTATTAGACAAGGGTTTCTCCCACTTTTCATGACGGAGCATTTT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801414 106 + 123690457 tatataaatatttactttgaagt--ggaagaact----gg--aagtagatagtttaaaca----tgaagtgtcttggta-tagacaaggg-ttctcccactctacatgacgggagcattt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224268 92 + 180051392 tATGTAAATATTTACTTTGAACT---------------GG--AAGTAGATAGTT-----A----TAAAGTGTCTTGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGACGGGAGCATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296407 97 - 181584905 tATGTAAATATTTACTTTGAACT---------------GG--AAGTAGGTAGTTTAAACA----TACAGTGTCTCGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGACGGGAGCATTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 48448 92 - 100774 tATGTAAATATTTACTTTGAACT---------------GG--AAGTAGGTAGTT-----A----TAAAGTGTCTTGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGACGGGAGCATTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206888 97 + 218577 tATGTAAATATTTACTTTGAACT---------------GG--AAGTAGGTAGTTTAAACA----TACAGTGTCTCGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGACGGGAGCATTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627761 96 - 91010382 tATGTAAATATTTACTTTGAACT---------------GG--AAGTAGGTAGTTTAAACA----TACAGTGTCTCGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGACCGA-GCATTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26615 96 - 74206 tATGTAAATATTTACTTTGAACT---------------GG--AAGTAGGTAGTTTAAACA----TACAGTGTCTCGGTA-TAGACAAGGG-TTCTCCCACTTTTCATGATGGG-AGCATT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 165056 106 - 204313951 tATATAAATATTTACTTTGAAGT--AGAAAAACT----GG--AAGTAGATAGCTTGAACA----TAAAGTGTTTTGGTA-TATACGAGGG-TTCTCCCACTTTTCATGATGGGAGCATTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 229161 105 + 306014 tATA-AAATATTTACTTTGAAGT--ATAAAAACT----GG--AAGTAGATAGCTTGAACA----TAAAGTGTTTTGGTA-TATGCGAGGG-TTCTCCCACTTTTCATGATGGGAGTATTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 89202 100 + 211231 tATATAAATATTTACTTTG--------AAAAACT----GG--AAGTAGATAGCTTGAACA----TAAAGTGTTCTGGTG-TATACGAGGG-TTCTCCCACTTTCCATGATGGGAGCATTT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56073 74 + 2165740 tgAATAA--------TTTTAAGT---------------AG--AAAAACAC-TTTTTAACA----TAAAGTGT---------------GGT-TTCACCTCCTGTTCGTGATGTGAGCATTT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30188031 95 - 42124431 tatataaatac--------aaat--agaaaaacttttggt--aaatacagggtttaagcataattaaagaatgataata-tatgcaaggt-ttc----acttctt-------gagcattt i canFam3.chr34 I 149 C 0 e mm10.chr13 46098087 262 - 120421639 I e dasNov3.JH577625 562886 125 + 913073 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=82364.000000 s hg38.chr3_KI270779v1_alt 56057 10 + 205312 ttgtaaagca s panTro5.chr3 200043381 10 + 202621043 TTGTAAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25888 10 + 190779 TTGTAAAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880545 10 - 880730 TTGTAAAGCA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801520 10 + 123690457 ttgtaaagca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224360 10 + 180051392 TTGTAAAGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296504 10 - 181584905 TTGTAAAGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 48540 10 - 100774 TTGTAAAGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206985 10 + 218577 TTGTAAAGCA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627857 10 - 91010382 TTGTAAAGCA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26711 10 - 74206 TTGTAAAGCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 165162 5 - 204313951 TTGTA----- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108150v1 229266 10 + 306014 TTGTAAAGCA i cebCap1.NW_016108150v1 C 0 I 466 s aotNan1.NW_018494784v1 89302 5 + 211231 TTGTA----- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56147 10 + 2165740 TTGTAAAACA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30188126 10 - 42124431 gtgtaaagca i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 563011 10 + 913073 ttttgAAATA i dasNov3.JH577625 I 125 C 0 e mm10.chr13 46098087 262 - 120421639 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=621724.000000 s hg38.chr3_KI270779v1_alt 56067 101 + 205312 aagcact-gagaatctggtacagtgtcattttc-gtt-gctctg--ttccactctaccgatctgccgt-catttaca------gtcccc--tgttgc-gcatg-tag-atca-tttttg s panTro5.chr3 200043391 97 + 202621043 -----CT-GAGAATCTGGTACAGTGTCATTTTC-ATT-GCTCTG--TTCCACTCTACAGATCTGCCGT-CACTTACA------GTCCCCC-TGTTGC-GCATG-TAG-ATCA-TTTTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25898 96 + 190779 -----CT-GAGAATCTGGTACAGTGTCATTTTC-GTT-GCTGTG--TTCCACTCTACCGATCTGCCGT-CATTTACA------GTCCCC--TGTTGC-GCATG-TAG-ATCA-TTTTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880555 103 - 880730 -----CTGGAGAATCTGGTACAGTGTCATTTTCTGTT-GCTCTGGTTTCCACTCTACCGATCTGCCGTGCATTTACA------GTCCCC--TGTTGCAGCATG-TAG-ATCATTTTTTG i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801530 95 + 123690457 -----ct-gagaatctggtacagtgtcattttc-gtt-gctctg--ttcca-tctgtggatctgccat-cattgaca------ctcccc--tgttgc-gcatg-tag-atca-tttttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224370 96 + 180051392 -----CT-GAGAATCTGGCACAGGGTCA-TTTC-GTTGGCTCTG--TTCCACTCTACGGATCTGCCGC-CATTTACA------GTCCCC--TGTTGC-GCATG-TAG-ATCA-TTTTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296514 95 - 181584905 -----CT-GAGAATCTGGCACAGGGTCA-TTTC-GTC-GCTCTG--TTCCACTCTAGGGATCTGCCGC-CATTTACA------GTCCCC--TGTTGC-GCATG-TGG-AACA-TTGTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 48550 95 - 100774 -----CT-GAGAATCTGGCACAGGGTCA-TTTC-GTC-GCTCTG--TTCCACTCTACGGATCTGCCGC-CATTTACA------GTCCCC--TGTTGC-GCATG-TAG-ATCA-TTTTTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 206995 95 + 218577 -----CT-GAGAATCTGGCACAGGGTCA-TTTC-GTC-GCTCTG--TTCCACTCTAGGGATCTGCCGC-CATTTACA------GTCCCC--TGTTGT-GCATG-TAG-ATCA-TTTTCG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627867 95 - 91010382 -----CT-GAGAATCTGGCACAGGGTCA-TTTC-GTC-GCTCTG--TTCCACTCTACGGATCTGCCGC-CATTTACA------GTCCCC--TGTTGC-GCATG-TAG-ATCA-TTTTTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26721 95 - 74206 -----CT-GAGAATCTGGCACAGGGTCA-TTTC-GTC-GCTCTG--TTCCACTCTAGGGATCTGCCGC-CATTTACA------GTCCCC--TGTTGC-GCATG-TAG-ATTA-TTTTCG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 165167 105 - 204313951 CAGCACT-GAGACTCTTGCACAGTGTCATTTTC-GGG-GCTGTG--TTCCACCCTGCAGACTTGTCCT-TATTGACA----CGGTCCCC--CGTCGT-GCATGACAGTGTCA-TTTTCG i calJac3.chr2 C 0 I 720 s aotNan1.NW_018494784v1 89307 103 + 211231 AAGCACT-GAGACTCTTGCACAATGTCATTTTC-GTG-GCTCTG--TTCCACTCTGCGGATTCACCCT-CATTTACA----CGGTCCCC--CGTGGT-GCATG-TAG-ATCA-TTTTTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56157 98 + 2165740 -----TT-TAGAATCTTACACTGTATCATTTTA-ATT-ACTCTG--CTCTACTATACAGAGTTGTCAT-CATTTACA----TGGTTCCC--TGTTGC-GCATG-TAG-ATCA-TTTTCT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30188136 102 - 42124431 -----tc-aagaattttatacattgttatttta-gtt-gctgta--tttcattacatggagttaccat-aatttacatacctggtcccc--tattgt-acgtt-tag-gtca-tttttg i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 563021 93 + 913073 AAGTGTT-GAG--TCTTGTACAGTGCTGTTTTA-AGG-GCTCTC--CTCCACTGCAAGGATTTGTCCT---------------GGCCCCAGTGTTGC-ACATT-CAG-GTCC-CTTTCA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e cebCap1.NW_016108150v1 229276 466 + 306014 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=197562.000000 s hg38.chr3_KI270779v1_alt 56168 29 + 205312 aatt--tgttattggaaaata--ctgcagc-aaa s panTro5.chr3 200043488 29 + 202621043 AATT--TGTTATTGGAAAATA--CTGCAGC-AAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 25994 29 + 190779 AATT--TGTTATTGGAAAATA--CTGCAGC-AAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880658 32 - 880730 AATT--TGTTATTGGGAAATAACTGGCAGCAAAA i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801625 29 + 123690457 aatt--tgttactggaaaata--ctgcagc-aaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224466 29 + 180051392 AATT--TGTTATTGGAAAAGA--CTGCGGC-AAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296609 29 - 181584905 AATT--TGTTATCGGAAAAGA--CTGCGGC-AAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 48645 29 - 100774 AATT--TGTTATTGGAAAAGA--CTGCGGC-AAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207090 29 + 218577 AATT--TGTTATTGGAAAAGA--CTGCAGC-AAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627962 29 - 91010382 AATT--TGTTATTGGAAAAGA--CTGCGGC-AAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26816 29 - 74206 AATT--TGTTATTGGAAAAGA--CTGCAGC-AAA i manLeu1.NW_012101728v1 C 0 C 0 s aotNan1.NW_018494784v1 89410 29 + 211231 AATT--TGTTATTGAAAAATA--CTGCAGC-AAA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56255 29 + 2165740 ACTT--TGTTACTGAAAAATA--CTCCAGT-GAA i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30188238 29 - 42124431 agtt--tgttactgaaaaata--ctccaca-atg i canFam3.chr34 C 0 I 8 s dasNov3.JH577625 563114 31 + 913073 AGTTTCTGTTACTGAAAAATA--CCCCAGT-GAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e cebCap1.NW_016108150v1 229276 466 + 306014 I e calJac3.chr2 165272 720 - 204313951 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=196147.000000 s hg38.chr3_KI270779v1_alt 56197 31 + 205312 ------taccttAAAGTTCA-CAT-G-----CC-GTAAATCTACT s panTro5.chr3 200043517 31 + 202621043 ------TACCTTAAAGTTCA-CAT-G-----CC-GTAAATCTACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26023 31 + 190779 ------TACCTTAAAGTTCA-CAT-G-----CC-GTCAATCTACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880690 31 - 880730 ------TACCTTAAAGTTCA-CAT-G-----CC-GTAAATCTACT i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801654 31 + 123690457 ------taccttAAAGTTCA-CAT-G-----CC-GTAAATCTACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224495 31 + 180051392 ------TACTTTTAAGTTCC-CAT-G-----CC-ATTAATCTACT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296638 31 - 181584905 ------TACCTTTAAGTTCC-CAG-G-----CC-GTAAATCTACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 48674 31 - 100774 ------TACTTTAAAGTTCC-CAT-G-----CC-ATTAATCTACT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207119 31 + 218577 ------TACCTTTAAGTTCC-CAT-G-----CC-ATTAATCTACT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89627991 31 - 91010382 ------TACCTTTAAGTTCC-CAG-G-----CC-ATAAATCTACT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 26845 31 - 74206 ------TACCTTTAAGTTCC-CAT-G-----CC-ATTAATCTACT i manLeu1.NW_012101728v1 C 0 C 0 s aotNan1.NW_018494784v1 89439 31 + 211231 ------TACCTTTAAGTTCC-CAT-G-----CC-ATAAATCTAtt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56284 30 + 2165740 ------TACCTTTAAGTTCC-CACAG-----CT-GTAAATCTA-- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46098349 32 - 120421639 ------TGTCTTAAAGTTCT-CAT-G-----CCTGTAAATGTACT i mm10.chr13 I 262 C 0 s canFam3.chr34 30188275 29 - 42124431 ------tGATTTTAAGTTCC---T-G-----AA-ATTTGTCTACA i canFam3.chr34 I 8 I 7 s dasNov3.JH577625 563145 43 + 913073 TGCCTTGTCTTTTAAGTTCTGCAT-GTATATCT-GAAAATCTGCT i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 229276 466 + 306014 I e calJac3.chr2 165272 720 - 204313951 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I a score=7098.000000 s hg38.chr3_KI270779v1_alt 56228 1 + 205312 T s panTro5.chr3 200043548 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26054 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880721 1 - 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801685 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224526 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48705 1 - 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207150 1 + 218577 T i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 26876 1 - 74206 T i manLeu1.NW_012101728v1 C 0 C 0 s aotNan1.NW_018494784v1 89470 1 + 211231 t i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46098381 1 - 120421639 T i mm10.chr13 C 0 I 1 s canFam3.chr34 30188311 1 - 42124431 T i canFam3.chr34 I 7 C 0 s dasNov3.JH577625 563188 1 + 913073 T i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 56314 0 + 2165740 C e cebCap1.NW_016108150v1 229276 466 + 306014 I e calJac3.chr2 165272 720 - 204313951 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=8281.000000 s hg38.chr3_KI270779v1_alt 56229 1 + 205312 T s panTro5.chr3 200043549 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26055 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880722 1 - 880730 T i gorGor5.CYUI01015759v1 C 0 C 0 s nomLeu3.chr11 120801686 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224527 1 + 180051392 T i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48706 1 - 100774 T i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207151 1 + 218577 T i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 26877 1 - 74206 T i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 165992 1 - 204313951 T i calJac3.chr2 I 720 C 0 s cebCap1.NW_016108150v1 229742 1 + 306014 T i cebCap1.NW_016108150v1 I 466 C 0 s aotNan1.NW_018494784v1 89471 1 + 211231 t i aotNan1.NW_018494784v1 C 0 I 460 s canFam3.chr34 30188312 1 - 42124431 T i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 563189 1 + 913073 T i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 56314 0 + 2165740 C e mm10.chr13 46098382 1 - 120421639 I e saiBol1.JH378155 125576 2205 - 16417988 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=62522.000000 s hg38.chr3_KI270779v1_alt 56230 7 + 205312 TATAGTT s panTro5.chr3 200043550 7 + 202621043 TATAGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26056 7 + 190779 TATAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01015759v1 880723 7 - 880730 TATAGTT i gorGor5.CYUI01015759v1 C 0 N 0 s nomLeu3.chr11 120801687 7 + 123690457 TATAGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224528 7 + 180051392 TATAGTT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48707 7 - 100774 TATAGTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207152 7 + 218577 TATAGTT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 26878 7 - 74206 TATAGTT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 165993 7 - 204313951 TATAGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 127781 7 - 16417988 TATAGTT i saiBol1.JH378155 I 2205 C 0 s cebCap1.NW_016108150v1 229743 7 + 306014 TATAGTT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 89932 7 + 211231 TATAGTT i aotNan1.NW_018494784v1 I 460 C 0 s mm10.chr13 46098383 6 - 120421639 -ATGGCC i mm10.chr13 I 1 C 0 s canFam3.chr34 30188313 6 - 42124431 TATAGT- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 563190 7 + 913073 TATAGTT i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 56314 0 + 2165740 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=2763539.000000 s hg38.chr3_KI270779v1_alt 56237 334 + 205312 AAAATTTTTCAAAAG----GAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTT-ACCACTGA-----CTTCTTTTCAAGGTCACTGTGGAATATAGACCCATAATTGACAAAACTTTGAACGAGGCTGACTGTGCCACTGTCCCCCCAGCCATTCACTCCTACTGATGAGACAAGATGTGGTGATGACAGAATCAGCTTTTGTAATTATGTATAATAGCTCATGCATGTGTCAATGTCATAACTGTCTTTATACGCTTCTGCACTCTGGGGAAGAAGGAGTA-CATT--GAAGGGGGATTGGC-ACCCAGTGGCCG----------------------------GGGAGC--G----TGGCACTT-ACCTTTGTC s panTro5.chr3 200043557 334 + 202621043 AAAATTTTTTAAAAG----GAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTT-ACCACTGA-----CTTCTTTTCAAGGTCACTCTGGAATATAGACCCATAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTACGTATAATAGCTCATACATGTGTCCATGTCATAACTGTCTTTATACGCTTCTGCACTCTGGGGAAGAAGGAGTA-CATT--GAAGGGGGATTGGC-ACCCAGTGGCCG----------------------------GGGAGC--G----TGACACTT-ACCTTTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26063 334 + 190779 AAAATTTGTCAAAAG----GAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTT-ACCACTGA-----CTTCTTTTCAAGGTCACTCTGGAATATAGACCCATAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCACTCCTACTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTACCTATAATAGCTCATGCATGTGTCCATGTCATAACTGTCTTTATACGCTTCTGCACTCTGGGGAAGAAGGAGTA-CATT--GAAGGGGGATTGGC-ACCCAGTGGCCG----------------------------GGGAGC--G----TGGCACTT-ACCTTTGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 28641 333 + 41186 AAAATTTTTCAAAAG----GAACACAAGAGACGGCTTTTTGTACATTTTTGTGC-----TTAACTT-ACCACTGA-----CTTCTTTTCAAGGTCACTCTGGAATATAGACCCGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGT-CCCCCAGCCATTCACTCCTACTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTACGTATAATAGCTCCTGCATGTGTCCATGTCATAACTGTCTTCATACGCTTCTGCACTCTGGGGAAGAAGGAGTA-CATT--GAAGGGGGATTGGC-ACCCAGTGGCCG----------------------------GGGAGC--G----TGGCACTT-ACCTTTGTC i gorGor5.CYUI01002752v1 N 0 C 0 s nomLeu3.chr11 120801694 362 + 123690457 AAAATTTTTCAAAAG----GAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTT-ACCACTGA---CTCTTCTTTTCAAGGTCACTCTGGAATATAGACCCATAATTGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTATGTGTAATAGTTCATGCATGTGTCCATGTCATAACTGTCTTTATACGCTTCTGCACTCCAGGGAAGAAGGAGTA-CATT--GAAGGGAGATTGGC-ACCCAGTGTCCGGGAG--CTTGCCAGGAACCCAGTGGCTAGGGAGC--G----TGGCACTT-ACCTTTGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224535 357 + 180051392 TAAATTTTTCAAAAG----GAATACATGAGATGGCTTTTTGTACATTTTTATG----------CTT-ACCACTGA---TTCTTCTTTTCAAGGTCACTCTGGAATATAGACCCGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCAGTGATAACAGAATCAGCTTTTGTAATTATGTATAATAGCTCATGCATGTGTCCATGTCATAACTGCCTTTATACGCTTCTGCACTCCGGGGAAAAAGGAGTA-CATT--GAAGGGAGATTGGC-ACCCAGTGGCTGGTAG--CTTGCCAGGAACCCAGTGGCCAGGGAAC--G----TGGCACTT-ACCTTTGTC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 48714 357 - 100774 TAAATTTTTCAAAAG----GAATACATGAGATGGCTTTTTGTACATTTTTATG----------CTT-ACCACTGA---TTCTTCTTTTCAAGGTCACTCTGGAATATAGACCTGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCAGTGATAACAGAATCAGCTTTTGTAATTATGTATAATAGCTCATGCATGTGTCCATGTCATAACTGCCTTTATACGCTTCTGCACTCCGGGGAAAAAGGAGTA-CATT--GAAGGGAGATTGGC-ACCCAGTGGCTGGTAG--CTTGCCAGGAACCCAGTGGCCAGGGAAC--G----TGGCACTT-ACCTTTGTC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207159 357 + 218577 AAAATTTTTCAAAAG----GAATACATGAGATGGCTTTTTGTACATTTTTATG----------CTT-ACCACTGA---TTGTTCTTTTCAAGGTCACTCTGGAATATAGACCCGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCAGTGATAACAGAATCAGCTTTTGTAATTATGTATAATAGCCCATGCATGTGTCCATGTCATAACTGCCTTTATACGCTTCTGCACTCCGGGGAAAAAGGAGTA-CATT--GAAGGGAGATTGGC-ACCCAGTGGCTGGTAG--CTTGCCAGGAACCCAGTGGCCAGGGAAC--G----TGGCACTT-ACCTTTGTC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 26885 357 - 74206 AAAATTTTTCAAAAG----GAATACATGAGATGGCTTTTTGTACATTTTTATG----------CTT-ACCACTGA---TTGTTCTTTTCAAGGTCACTCTGGAATATAGACCCGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCAGTGATAACAGAATCAGCTTTTGTAATTATGTATAATAGCCCATGCATGTGTCCATGTCATAACTGCCTTTATACGCTTCTGCACTCCGGGGAAAAAGGAGTA-CATT--GAAGGGAGATTGGC-ACCCAGTGGCTGGTAG--CTTGCCAGGAACCCAGTGGCCAAGGAAC--G----TGGCACTT-ACCTTTGTC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166000 347 - 204313951 AAAAATTTTCAAAAG----GAACACAAGAGATGGCTATTTGTACATTTTTGTGC-----TTAACTT-ACCGCTGA---CCCTTCTTTTCAAGGTCACTTTGGAATATAGACCTGTAATCGACAAAACTTTGAACGAGGCTGACTGCACCTCCGTTCCCCCGGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAAGCAGCCTTTGTAATTATGTATCATAGCTCATGCATGTGTTCATGTCGTAACTGTCTTTATAAGCTTCTGCACTGGGGTGAAGAGGGAGTC-CATT--GAAGGGAGATGGGC-ACCCAGTGGCCGGGAG--CC---------------GGCCAGGGACC--G----CAGCACTT-ACCTTTGTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 127788 352 - 16417988 AAAAATTTTCAAAAG----GAACACGAGAGATGGCTTTTTGTACATTTTTGTGC-----TTACCTT-ACCACTGA---CCCTTCTTTTCAAGGTCACTCTGGAATATAGACCTGTAATCGACAAAACTTTGAACGAGGCTGACTGCACCACCGTCCCCCCAGCCATCCGCTCCTACTGATGAGACAAGACGCATTGATGACAGAAGCAGCTTTTGTAATTATGTATCATAGCTCA------TGTTCATGTCATAACTGTCTTTATAAGCTTCTGCACTCTGGTGAAGAAGGAGTC-CACT--GAAGGGAGATTGGC-ACCCAGCGGCCGGGTG--CC----AGGAACCCAGTGGCCAGGGCCT--G----CAGCACTT-ATCTTTGCC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 229750 362 + 306014 AAAATTTTTCAAAAG----GAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTT-ACCACTGA---CCCTTCTTTTCAAGGTCACTCTGGAATATAGACCTGTAATCGACAAAACTTTGAACGAGGCTGACTGCACCACCGTCCCCCCAGCCATTCGCTCTTACTGATGAGACAAGATGCGGTGATGACAGAAGCAGCTTTTGTAATTATGTATCATAGCTCATGCACGTGTTCATGTCATAACTGTCTTTATGAGCTTCTGCACTCTGGTGAAAGAGGAGTC-CATT--GAAGGGAGATTGGC-ACTCAGCGGCCAGGAG--CCTGCCAGGAACCCAGTGGCCAGGGACC--G----CAGCACTT-ATCTTGGTC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 89939 363 + 211231 AACGTTTTTCAAAAG----GAACACAGGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTTAACCACTGA---CCCTTCTTTTCAAGGTCACTCTGGAATATAGACCTGTAATCGACAGAACTTTGAACGAGGCTGACTGCACCAGCGTCCCCCCCGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAAGCAGCTTTTGTAATTATGTATCATAGCTCGTGCACGTGTTCATGTCGTAACTGTCTTTATAAGCTTCTGCACTCTGGTGAAGAAGGAGTC-CATT--GAAGGGAGATTGGC-ACCCAGTGGCCAGGAG--CTGGCCAGGATCCCAGTGGCCAGGGACG--G----CAGCACTT-ACCTTTGTC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56314 334 + 2165740 -AGTTTTTTCAAAAGCAAATAACACAGGAGATGGCAATTTGTGCATT---------------ACTT-ACCACTAATTCTTTTTTTTTTTAAGGTCACTCTGGAATATAGACCTGTAATTGACAAAACTTTGAATGAAGCTGATTGTGCCACTGTTCCACCGGCCATTCGTTCCTATTGATGAGAGGAAATTCATTGATCACGGAATCTGCTTTTGTAATTATGTATAATAGCTTACACACATGTTTATGTCACAGCTACCTTTATAAAATGCTGCACTTGAGGGAATAGTGAGTA-CATTTGAAAAGCAGTTTTCA-ACCCAGCACCCA----------------------------AGGAAT--G----CTGGAGTT-AGCTTTATC i otoGar3.GL873745 C 0 I 297 s mm10.chr13 46098389 341 - 120421639 -TAATTTTACAGAAG-----CACAGAAGAAATGGCTGTTTGTAAATATTCATGC-----CTTGATT-CACCCCGA---CTCTTTTCTCCAAGGTTACTTTGGAGTACAGACCTGTTATCGACAAGACCTTGAATGAGGCTGACTGTGCCACCGTACCTCCTGCTATCCGCTCCTACTGATGAAACCTGAC-----AGCTACAGGACCAGCTTATGTGATTATATAGCATAGCTTACCTGCGTTTCCCC-TCATACTTGTCTTGGTAAAATTCTGCTCTC--ATGAACAAGGAGTC-ACTT--CA---TAGATTGTG-ATCAACAGCTTGGTAGTACTTGCTGTAA------------GGGATTGAG----TTGCGCCA-GACTTTGTC i mm10.chr13 C 0 C 0 s canFam3.chr34 30188319 361 - 42124431 -GAATTTTTCAAAAA----ATATACAAGCGAATACTGTTTTTATGTTTTTCCACAAATTTTAACTT-ACTGTAGA---TTCTTCTTTTTAAGGTCTCATTGGAATATAGACCTGTGATCGACAGAACTTTAAATGAGGCTGACTGTGCCACGGTCCCTCCAGCCATTCGCTCCTACTGATGAGACCAGA------GTTGAC-----CAGCTTTTGTAATTATGTATAATAGCTCATGCGTGTGTTCATATCCTAATTACCTTTTTAAAATCCTGTACTCAAGTGAATAAGGAGTGTCATT-GGAATAGAGATCATCTACCCGGTAGCCAGAAG--CTTGCTAGTAA-TCAACAGCCAGGAAGT--GTGAATGAAGCTT-ACCTTTTGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 563197 293 + 913073 --AATTTTTAAAAAG----CAACAT--GGGATGGCTGTTGGTA----------------TT--CTT-AAGACTAA---CTTTTCTTTTCAAGGTCACTCTGGATTACAGGCCCGTAATCGACAAAACTTTGAACGAGACGGACTGTGCCACTATCCCACCTGCTATCCGCGCCTACTGATGAAGCCCCATGTGT-----ATAAAAACAGCTTCTGTTACGCTTTATGATGGCCCAAAAATGGGTCTCTG-----------------AAGTCCTGT-CTCCAGTGAATGAGGAG---CATT--GT----------TC-AGCCAGTGATCCAAAG--------------------GCCAGGAAGC--A----CTAAGCTTAACTTTTGTC i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=1496780.000000 s hg38.chr3_KI270779v1_alt 56571 186 + 205312 CCTTGCTTCATTCTTGTGACAAGATAAAACTGGGCACAGCTGTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATTTAAAATATTTTCCTGTTATGACTT--GTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATTATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG s panTro5.chr3 200043891 186 + 202621043 CCTTGCTTCATTCTTGTGACAAGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATGTCAAATATTTTACTGTTATGACGT--GTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATTATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26397 187 + 190779 CCTTGCTTCATTCTTGTGACAAGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTC-TTTATTTCCAA--ATCCATTTAAAATATTTTACTGTTGTGACTTTAGTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATTATCTTT--GTATTCTGTTACATCAAAATCCAGATAttttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 28974 186 + 41186 CCTTGCTTCATTCTTGTGACAGGATAAAACTGGGCACAGCTCTTAAATAAAATGTAAATGAACAAACTTGCTTTTATTTCCAA--ATCCATGTCAAATATTTTACTGTTATGACTT--GTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATTATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802056 188 + 123690457 CCTTGCTTCATTCTTGTGACACGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATTTAAAATATTTTACTGTTGTGACTTTAGTCATAT-TTGTTGACCTAAAT-ATCAAATGTAATTATCTTT--GTATTCTGTCACATCAAAATCCAGATATTTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 224892 188 + 180051392 CCTTGCTTCATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAAATAAAATACAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATTTAAAATATTTTACTATTATGACTTTAGTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATAATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49071 188 - 100774 CCTTGCTTCATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAAATAAAATACAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATTTAAAATATTTTACTATTATGACTTTAGTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATAATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207516 188 + 218577 CCTTGCTTCATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAAATAAAATACAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATTTAAAATATTTTACTATTATGACTTTAGTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATAATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27242 188 - 74206 CCTTGCTTCATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAAATAAAATACAAATGAACAAACTTTCTTTTATTTCCAA--ATCCATTTAAAATATTTTACTATTATGACTTTAGTCATAT-TTGTTGACCTAAAA-ATCAAATGTAATAATCTTT--GTATTCTGTTACATCAAAATCCAGATATTTTG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166347 189 - 204313951 CCTCCCTTCATTCTTGTGAGACCATAAAACTGGACACAGCCCTAAAATAAAACATAGATGAACAAACTTTCTTTTATTTCCAC--ATCCACTTAAAATATTTTACCGTCATGACTTTAGTCATAT-TTGTTGACCTAAAATATCAAATGGAATTATCTTT--GCATTCTGTTACATCAAAATCCAGAGATTTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128140 187 - 16417988 CCTCCCTTCATTCTTGTGACACCATAAAACTGGACACAGCTCTAAAATAAAACATAGATGAACAGAC--TCTTTTATTTCCAA--ATCCACTTAAAATATTTTACTGTTATGACTTTGGTCATAT-TTGTTGACCTAAAATATCAAATGTAATTATCTTT--GCATTCTGTTACATCAAAATCCAGATATTTTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 230112 189 + 306014 CCTCCCTTCATTCCTGTGACACCAGAAAACTGGACACAGCTCTAAAATAAAACTTAGATGAACAGACTTTCTTTTATTTCCAA--ATCCACTTAAAATATTTTACTGTTGTGACTTTAGTCATAT-TTGTTGACCTAAAATATCAAATGTAATTATCTTT--GCATTCTGTTACATCAAAATCCAGATATTTTG i cebCap1.NW_016108150v1 C 0 I 595 s aotNan1.NW_018494784v1 90302 188 + 211231 CCTCCCTTCATTCTTGTGAGACCATGAAACTGGACA-AGCTCTAAAATAAAACACAGATGAACAAACTTTCTTTTATTTCCAA--ATCCACTTAAAATATTTTACTGTTAGGACTTTAGTCATAT-TTGTTGACCTAAAATATCACATGTAACTATCTTT--GCATTCTGTTACATCAAAGGCCAGATACTTTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 56945 187 + 2165740 CCTTGCTTCCTTCTTGTGAAATGATAAGACTGGGCCCAATTCTTAAATGAAGCATAAATGAATAAACTTTCTTTTATTTCCAAATATCCATTTAAAATATTGTACTGTT-TGACTTTAGGCATAT-TTGTTGGCCTGAAATATCAAGGGTGATTATC-----ATATTCTGTTACATTAAAATCTAGATATTTTG i otoGar3.GL873745 I 297 C 0 s mm10.chr13 46098730 161 - 120421639 ----TCTTTATTCTTGTGCAGTGATAAAACTGG-CATAATTCTTAAGTGAAGTACAAATGAGCAA----TCTTTTATTTCCAA--A------TAAAACCATGTAGTAGTG-GATTTTAGTTCTAT-CTATTGGTCTGAAACAGCAAATATAATTTTCTTCCGCTGTCTAGCTGCAGCACA-------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30188680 148 - 42124431 ---TTCATCATCCTTGTGAAATAATAAAACTGGGCATGATTCTTAAATAAAGCATAAATTACAAA-----CTTCTATTTCCAA--GTCCATTTAAGAACTTGTACTATT-TGACTTGAGGCATGT--TGTTGACCTGAAA----------------------G-----------ATCAATATCCAGAAATTTTG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 563490 151 + 913073 CTTTGCTTCATTCTTATGAAATGAT-------------------AAATAAAACATAAACAAATGAA----CTCTTATTTCCAA--GTCCATT---AATGTT---------TGATCTTCAGCATATTTTATTGACCTGAATTAGCAACTATGG--ATCTTC----ATTCTTTTACAACAAAACCCGGAAACTTTG i dasNov3.JH577625 C 0 C 0 e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=27776.000000 s hg38.chr3_KI270779v1_alt 56757 3 + 205312 TTG s panTro5.chr3 200044077 3 + 202621043 TTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26584 3 + 190779 ttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29160 3 + 41186 TTG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802244 3 + 123690457 TTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225080 3 + 180051392 TTG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49259 3 - 100774 TTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207704 3 + 218577 TTG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27430 3 - 74206 TTG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166536 3 - 204313951 TTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128327 3 - 16417988 TTG i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 90490 3 + 211231 TTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 57132 3 + 2165740 TTG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30188828 3 - 42124431 TTG i canFam3.chr34 C 0 I 1339 s dasNov3.JH577625 563641 3 + 913073 TTG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46098891 0 - 120421639 C e cebCap1.NW_016108150v1 230301 595 + 306014 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=39008.000000 s hg38.chr3_KI270779v1_alt 56760 6 + 205312 CAGttt s panTro5.chr3 200044080 6 + 202621043 CAGttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26587 6 + 190779 tagttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29163 6 + 41186 CAGTTC i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802247 6 + 123690457 TAGttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225083 6 + 180051392 TGGTTt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49262 6 - 100774 TGGTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207707 6 + 218577 TGGttt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27433 6 - 74206 TGGttt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166539 6 - 204313951 CAGTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128330 6 - 16417988 CAGTTT i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 90493 6 + 211231 CAGttt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 57135 6 + 2165740 TAATTT i otoGar3.GL873745 C 0 I 87 s mm10.chr13 46098891 5 - 120421639 -AGTAT i mm10.chr13 C 0 C 0 s dasNov3.JH577625 563644 6 + 913073 TAGTTT i dasNov3.JH577625 C 0 C 0 e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 230301 595 + 306014 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=13569.000000 s hg38.chr3_KI270779v1_alt 56766 12 + 205312 -cttttt-------tttttt s panTro5.chr3 200044086 7 + 202621043 -c------------tttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26593 12 + 190779 -gttttt-------tttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29169 12 + 41186 -Cttttt-------tttttt i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802253 8 + 123690457 -cttttt-------ta---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225089 19 + 180051392 -cttttttttcttctttctt i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49268 19 - 100774 -Cttttttttcttctttctt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207713 12 + 218577 -cttttt-------tttctt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27439 12 - 74206 -cttttt-------tttctt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166545 12 - 204313951 -Cttctt-------tcttct i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128336 12 - 16417988 -Ctttct-------tcttct i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 90499 12 + 211231 -ctttcg-------tcttct i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46098896 11 - 120421639 --TGTTT-------TGTTCA i mm10.chr13 C 0 C 0 s dasNov3.JH577625 563650 12 + 913073 AAtttat-------ttttt- i dasNov3.JH577625 C 0 I 370 e otoGar3.GL873745 57141 87 + 2165740 I e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 230301 595 + 306014 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=5544.000000 s hg38.chr3_KI270779v1_alt 56778 4 + 205312 tttt- s panTro5.chr3 200044093 4 + 202621043 tttt- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 26605 4 + 190779 tttt- i panPan2.chrUn_NW_014024201v1 C 0 M 637 s gorGor5.CYUI01002752v1 29181 1 + 41186 t---- i gorGor5.CYUI01002752v1 C 0 C 0 s rheMac8.chr6 225108 4 + 180051392 ttct- i rheMac8.chr6 C 0 I 1 s macNem1.NW_012013899v1 49287 4 - 100774 ttct- i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 207725 4 + 218577 ttct- i cerAty1.NW_012004452v1 C 0 I 1 s manLeu1.NW_012101728v1 27451 4 - 74206 ttct- i manLeu1.NW_012101728v1 C 0 I 1 s calJac3.chr2 166557 4 - 204313951 tctt- i calJac3.chr2 C 0 I 10 s saiBol1.JH378155 128348 4 - 16417988 tctt- i saiBol1.JH378155 C 0 I 9 s aotNan1.NW_018494784v1 90511 4 + 211231 tttt- i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46098907 5 - 120421639 TTCTC i mm10.chr13 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e dasNov3.JH577625 563662 370 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 230301 595 + 306014 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e nomLeu3.chr11 120802261 0 + 123690457 C a score=104685.000000 s hg38.chr3_KI270779v1_alt 56782 19 + 205312 tttttgagacagggt--------tggt s panTro5.chr3 200044097 27 + 202621043 tttttgagaccaggttggtgcagtggt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29182 27 + 41186 tttttgagacagggttggtgcagtggt i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802261 27 + 123690457 tttttgagacaggatcggtgcagtggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225113 27 + 180051392 tttttgagacaggatcagtgcagtggt i rheMac8.chr6 I 1 C 0 s macNem1.NW_012013899v1 49292 27 - 100774 tttttgagacaggatcagtgcagtggt i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 207730 27 + 218577 tttttgagacaggatcagtgcagtggt i cerAty1.NW_012004452v1 I 1 C 0 s manLeu1.NW_012101728v1 27456 27 - 74206 tttttgagacaggatcagtgcagtggt i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 166571 27 - 204313951 tttttgagacaggatcagtgcagtggt i calJac3.chr2 I 10 C 0 s saiBol1.JH378155 128361 27 - 16417988 ttttggagacgggatcagtgcagtggt i saiBol1.JH378155 I 9 C 0 s aotNan1.NW_018494784v1 90515 26 + 211231 -tttggagacaggatcactgcagtggt i aotNan1.NW_018494784v1 C 0 C 0 s mm10.chr13 46098912 19 - 120421639 TGTGTGAAGTAGGGCAGGT-------- i mm10.chr13 C 0 I 696 e otoGar3.GL873745 57141 87 + 2165740 I e dasNov3.JH577625 563662 370 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 230301 595 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=841202.000000 s hg38.chr3_KI270779v1_alt 56801 190 + 205312 gcagtctcagctcactgcagcctcaaactcctgggcagctcaggtgatcttcccgactcagccttctaagtagctggggctacaggtgtgcaccaccacgcccagctcatttattttgtaattgtagggacagggtctcactttgttgcctaggctggtctcaaactgctgggcttaagtgatcgttcct s panTro5.chr3 200044124 190 + 202621043 gcagtctcagctcactgcagcctcaaactcctgggcagctcaggtgatcttcccaactcagccttctgagtagctggggctacaggtgtgcaccaccatgcccagctcatttattttgtaattgtagggacagggtctcactgtgttgcctaggctgatctcaaactgctgggctcaagtgatcgttcct i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29209 190 + 41186 gcagtctcagctcactgcagcctcaaactcctgggcagctcaggtgatcttcctgactcagccttctgagcagttggggctacaggtgtgcaccaccacgcccagctcatttattttttaattgtagggacagggtctcactgtgttgcctaggctggtctcaaactgctgggctcaagtgatcgtccct i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802288 190 + 123690457 gcagtctcagctcactgcagcctcaaactcctgggcagctccggtgatcttcccgactcagccttctgagtagttggggctacaggtgtgcaccaccacacccagctcatttattttgtaattgtagggacagggtctcactgtgttgcctaggctggtctcaaactgctgggctcaagtgatcgtccct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225140 190 + 180051392 gcagtctcagtttactgcagcctcaaactcctgggcggctcaagtgatcttcccaacccagccttctgagtagttggggctacaggtgtgcaccaccatgcccagctaatttattttttaattgtagggacagggtctcactatgttgcctaggctggtctcaaactcctgggctcaggtgatccttcct i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49319 186 - 100774 gcagtctaagtttactgcagcctcaaactcctgggcggctcaagtgatcttcccaacccagccttctgagtagttgggactacaggtgtgcaccaccatgcccagctaatttattttttaattgtagggacagggtctcactatgttgcctaggctggtc----actcctgggctcaggtgatccttcct i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207757 190 + 218577 gcagtctcagtttactgcagcctcaaactcctgggcggctcaagtgatcttcccaacccagccttctgagtagttggggctacaggtgtgcaccaccatgcccagctaatttattttttaattgtagggacagggtctcactatgttgcctaggctggtctcaaactcctgggctcaggtgatccttcct i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27483 190 - 74206 gcagtctcagtttactgcagcctcaaactcctgggcggctcaagtgatcttcccaacccagccttctgagtagttggggctacaggtgtgcaccaccatgcccagctaatttattttttaattgtagggacagggtctcactatgttgcctaggctggtctcaaactcctgggctcaggtgatccttcct i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166598 188 - 204313951 gcaatctcagctcgctgcagcctcagactcctgggaggctcaggtgatcctcccagcccagcctcctgagcagttggggctataggtgtgcaccaccatgcccagccagtttattttttaattgtagaaac--ggtctcaccatgttgcctagcctggtctcaaactcctgggttcaagtgatcctccat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128388 188 - 16417988 gcaatctcagctcactgcagcctcagactcctgggaggctcaagtgatcttcccgactcagcctcctgagcagttggggctataggtgtgcaccaccatgtccagccagtttattttttaattgtagaaat--ggtctcactatgttgcctaggctggtctcaaactcctgggctcaagtgatcctccgt i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 90541 188 + 211231 gcgatctcagccaactgcagcctcagactcctgagaggctcaagtgatcttcccaactcagcctcccgagcagttggggctataggtgtgcaccaccatgcccagccagtttattttttaattgtagaaat--ggtctcactatgctgcctaggctggtctcaaacccctgggctcaagtgatcctccgt i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 563662 370 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 230301 595 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=270815.000000 s hg38.chr3_KI270779v1_alt 56991 52 + 205312 ccttggcctcccgaagtgctggaattataggtgtgaaccaccatgtctggcc--- s panTro5.chr3 200044314 55 + 202621043 ccttggcctcctgaagtgctggaattataggtgtgaaccaccatgtctggccTTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29399 54 + 41186 ccttggcctcc-gaagtgctggaattataggtgtgaagcaccatgtctggccTTA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802478 55 + 123690457 ccttggcctcccaaagtgctggaattgtaggtgtgaactaccatgtttggccTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225330 55 + 180051392 ccttggcctcccaaagtgctggaattataggtgtgaaccaccgtgcctggccTTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49505 55 - 100774 ccttggcctcccaaagtgctggaattataggtgtgaaccaccgtgcctggccTTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 207947 55 + 218577 ccttggcctcccaaagtgctggaattataggtgtgaaccaccatgcctggccTTG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27673 55 - 74206 ccttggcctcccaaagtgctggaattataggtgtgaaccaccatgcctggccTTG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166786 55 - 204313951 ccttggcctcccaaagtgctggaatgataggtgtgaaccaccatgcctggACTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128576 55 - 16417988 ccttggcctcccaaagtgctgggattataggtgtgaaccaccatgcctggACTCG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 230896 54 + 306014 cctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccgg-ccTG i cebCap1.NW_016108150v1 I 595 C 0 s aotNan1.NW_018494784v1 90729 54 + 211231 ccttggcctcccacagtgccggaattataggtgtgaacc-ccatgcctggACTCC i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 563662 370 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=478369.000000 s hg38.chr3_KI270779v1_alt 57043 82 + 205312 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCT-------------------------TTTCCTCCTTTTTTCTTA----GCAGATGGTTTGCTAGGTGAGTGTGT s panTro5.chr3 200044369 78 + 202621043 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTTGTGCT-------------------------TTTCCTCCTTTTTTCTTA----GCAGATGGTTTGCTAG----GTGTGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29453 82 + 41186 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCT-------------------------TTTCCTCCTTTTTTCTTA----GCAGATGGTTTGCTAGGTGAGTGTGT i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802533 81 + 123690457 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGATGCT-------------------------TTTCCTCCTTTTTG-TTG----GCAGATGGTTTACTAGGTGAGTGTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225385 106 + 180051392 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCCTGAGAGCGAATGGAGAAAACTAGTATTTCCTCCCTTTTC-TTG----GCAGATGGTTTACTAGGTCAGTGTGT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49560 106 - 100774 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCCTGAGAGCGAATGGAGAAAACTAGTATTTCCTCCCTTTTC-TTG----GCAGATGGTTTACTAGGTCAGTGTGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208002 106 + 218577 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCCTGAGAGCAAATGGAGAAAACTAGTATTTCCTCCCTTTTC-TTG----GCAGATGGTTTACTAGGTCAGTGTGT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27728 106 - 74206 TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCCTGAGAGCAAATGGAGAAAACTAGTATTTCCTCCCTTTTC-TTG----GCAGATGGTTTACTAGGTCAGTGTGT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166841 106 - 204313951 ATGTTGTTTATTTGTAAGTTCAAATTGACGTTGGTGCCTGAGAGCAGATGGAGAAAATGAACATTTCCTCCTTTTTC-TTG----ACAGACGGTTTACTAGGTAAGCGTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128631 106 - 16417988 ATGTAATTTACTTCTAAGTTCAAATTGATGTTGGTGCCTGAGAGCGGATGGAGAAAATGAACATTTCCTCCTTTTTC-TTG----ACAGACGGTTTACTAGGTAAGCGTGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 230950 106 + 306014 ATGTAGTTTATTTCTAAATTCAAATTGATGTTGGTGCCTGAGAGCGGATGGAGAAAACGAACATTTCCTCCTTTTTC-TTG----ACAGACGGTTTACTAGGTAAGCGTGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 90783 106 + 211231 ATGTAGTTTATTTCCAAGTTCGAATCGATGTTGGTGCCTGAGAGCGGATGGCGAAAACGAACATTTCCTCCTTTTTC-TTG----AGAGATGGTTTACTAGGTAAGCGTGT i aotNan1.NW_018494784v1 C 0 C 0 s dasNov3.JH577625 564032 110 + 913073 TTGTAGTTTAATTTTAAGTAAAAATGAACATTGGTATCTAACAGCAAAAGAAGAAAACTAACATTTCTTCCTTGTTC-TTAGTATGCAGATGGTTTATTAGGTGAACTTGT i dasNov3.JH577625 I 370 I 13689 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=517595.000000 s hg38.chr3_KI270779v1_alt 57125 99 + 205312 CCTCGATTCTTTAAATcaggggtccccaatccccaggccacagattgtt-ccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagc s panTro5.chr3 200044447 100 + 202621043 CCTCGATTCTTTAAATcacgggtccccaatccccaggccacagattgttaccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29535 100 + 41186 CCTCGATTCTTTAAATcaggggtccccaatccccaggccacagattgttaccagtccatggcctgttaggaaccaggccacacagtagggggtgagcagc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802614 100 + 123690457 CCTTGATTATTTAAATcagtggtccccaatccccaggccacagatcattaccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225491 100 + 180051392 CCTCGATTATTTAAATcaggggtccccaatccccaggccacaaattggtaccactccatggcctgttaggaaccgggccgcacagtagggggtgggcagc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49666 100 - 100774 CCTCGATTATTTAAATcaggggtccccaatccccaggccacaaattggtaccactccatggcctgttaggaaccggccggcacagtagggggtgggcagc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208108 100 + 218577 CCTCGATTATTTAAATcaggggtccccaatccccaggccacagattggtaccattccatggcctgttaggaaccgggctgcacagtagggggtgagcagc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27834 100 - 74206 CCTCGATTATTTAAATcaggggtccccaatccccaggccacagattggtaccattccatggcctgttaggaaccgggctgcacagtagggggtgagcagc i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 166947 100 - 204313951 CCTCGATTATTTAAATcagggctccccagtccctaggccacagattgttaccagcccgtggcctgttaggaaccagaacacacagcaggaggtgagcagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128737 88 - 16417988 CCTTGATTATTTAAATcagggctccccagtccctaggccacagattgctaccagcccgtggcctgttaggaaccaggccgcacagcag------------ i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 231056 100 + 306014 CCTCGATTATTTAAATcagggctccccagtccctaggccacagactgttactagcccatggcctgttaggaaccaggccgcacagcaggcggtgagcagc i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 90889 100 + 211231 CCTCGATTATTTAAATcagggctccccagtccctaggccacagattgttaccagcccatggcctgttaggaaccgggccacacagcaggaggtgagcagc i aotNan1.NW_018494784v1 C 0 I 7 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=37432.000000 s hg38.chr3_KI270779v1_alt 57224 16 + 205312 cagccagtgagcatta s panTro5.chr3 200044547 16 + 202621043 cggccagtgagcatta i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29635 16 + 41186 cagccagtgagcatta i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802714 16 + 123690457 cggccagtgagcatta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225591 16 + 180051392 tggccagtgaacatta i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49766 16 - 100774 tggccagtgaacatta i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208208 16 + 218577 tggccagtgaacatta i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27934 6 - 74206 tggcca---------- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 167047 16 - 204313951 aggccagtgagcctga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 128825 8 - 16417988 --------gagcctga i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 231156 16 + 306014 aggccagggagcctga i cebCap1.NW_016108150v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=48537.000000 s hg38.chr3_KI270779v1_alt 57240 12 + 205312 ctgtgtgagctc s panTro5.chr3 200044563 12 + 202621043 ctgtgtgagctc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29651 12 + 41186 ctgtgtgagctc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802730 12 + 123690457 ctgtgtgagttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225607 12 + 180051392 ctgtgtgagctc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49782 12 - 100774 ctgtgtgagctc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208224 12 + 218577 ctgtgtgagctc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27940 10 - 74206 --gtgtgagctc i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 128833 12 - 16417988 ctgtgtgagctc i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 231172 12 + 306014 ctgtgtgagctc i cebCap1.NW_016108150v1 C 0 I 34 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e calJac3.chr2 167063 0 - 204313951 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=11089.000000 s hg38.chr3_KI270779v1_alt 57252 4 + 205312 cgcc s panTro5.chr3 200044575 4 + 202621043 cgcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29663 4 + 41186 cgcc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802742 4 + 123690457 agcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225619 4 + 180051392 cgcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49794 4 - 100774 cgcc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208236 4 + 218577 tgcc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27950 4 - 74206 tgcc i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 128845 4 - 16417988 cgcc i saiBol1.JH378155 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e calJac3.chr2 167063 0 - 204313951 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=102642.000000 s hg38.chr3_KI270779v1_alt 57256 48 + 205312 ccctgccagagcattactgtgtgagctccaccccctgccagagcaTTA s panTro5.chr3 200044579 48 + 202621043 ccctgccagagcattactgtgtgagctccgccccctgccagatcaTTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01002752v1 29667 48 + 41186 ccctgccagagcattactgtgtgagctccgccccctgccagggcatta i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120802746 46 + 123690457 ccctgtcagagcattac--tgtgagctccacccccagccagattatta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225623 48 + 180051392 ccctgccagagcattactctgtgagctccaccttctgtcagatcatta i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49798 48 - 100774 tcctgtcagatcattactgtgtgagctccgcctcctgtcagatcatta i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208240 48 + 218577 ccgtgccagagcattactgtgtgagctccacctcctgccagagcatta i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 27954 48 - 74206 ctgtgccagagcattactgtgtgagctccacctcctgccagagcatta i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=114872.000000 s hg38.chr3_KI270779v1_alt 57304 74 + 205312 CTGTGTGAGCTCCGCCCCCTGCCAgagcattact-gtgtgagctccgccccctgtcagagcaTTACTGTGTGAGC s panTro5.chr3 200044627 74 + 202621043 CTGTGTGAGCTCCGCCCCCTGCCAGAGGATTACTGGTGTGAGCTCCGCCCACT-CCAGAGCATTACTGTGTGAGC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120802792 74 + 123690457 ttgtctgagctccgcctcctgtcagagcattact-gtctgagctccgccccctgtcagatcaTTACTGTGTGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225671 72 + 180051392 ctgtgtgagctccgcctcctgtcagatcattact-gtgtgagctccgccccctgtcagatcaTTAC--TGTGAGC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49846 74 - 100774 ctgtgtgagctccgcctcctgtcagatcaTTACT-GTGTGAGCCCCGCCCCCTGTCAGATCGTTACTGTGTGAGC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208288 74 + 218577 ctgtgtgagctccacctcctgccagagcattact-gtgtgagctccgcctcctgccagagcattactgtgtgagc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 28002 72 - 74206 ctgtgtgagctccgcctcctgtcagatcattac---tgtgagctccgcctcctgtcagatcaTTACTGTGCGAGC i manLeu1.NW_012101728v1 C 0 I 7752 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=35869.000000 s hg38.chr3_KI270779v1_alt 57378 40 + 205312 TCCGCCC-CCTGCCAGA-GATTACTGTGTGAGCTCCGCCCCC s panTro5.chr3 200044701 41 + 202621043 TTCCGCC-CCTGCCAGATCATTACTGTGTGAGCTCCGCCCAC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120802866 38 + 123690457 TCC-GCC-CCTGTCAT--cattactgtctgagctccgcctcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225743 40 + 180051392 -CCCGCC-CCCGTCAgatcattactgtgtgagcttcgcctcc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49920 40 - 100774 -CCCGCC-CCTGTCAGATCATTACTGTGTGAGCTCCGCCTCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 208362 41 + 218577 -tccgcctcctgccagagcattactgtgtgagctccacctcc i cerAty1.NW_012004452v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=63317.000000 s hg38.chr3_KI270779v1_alt 57418 118 + 205312 TGGCAGAGCATTACTGTGTGAGCT--CCGCCCCCTGGCAGAGCATTACTGTGTGAGCT-CCGCCCCCTGCCAGAG-AT-TACTGTGTGAGCTCCGCCCCCTGTCAGAGCATTAC-TGTGTGAGC s panTro5.chr3 200044742 119 + 202621043 TGCCAGAGGATTACTGTGTGAGCTCACCGCCCACTGCCAGAGCATAAT--TGTGAGCTCCCGCCCACTG-CAGAGCATCTACTGTGTG-GCTCCG-CCCCTGCCAGAGCATTACTTGTGTGACT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120802904 117 + 123690457 tgtcagatcattactgtgtgagct--ccgcctcctgtcaaatcattactgtctgagct-ccgccccctgtcagatcaT-TACTGTGTGAGCTCCACCTCCTGTC--agcattac-tgtgtgagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225783 115 + 180051392 tgtcagatcattactgtgtgagct--ccgcctcctgtcagatcaTTACTGTGTGAGCC-CCGCC-CCCGTCAGATCAT-TAC--TGTGAGCCCCGCC-CCCGTCAgatcattac-tgtgtgagc i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 208403 115 + 218577 tgccagagcattactgtgtgagct--ccgcctcctgtcagatcattac--tgtgagtt-ccgcctcctgtcagatcat-tac--tgtgagctccgcctcctgtcagatcaTTAC-TGTGCGAGC i cerAty1.NW_012004452v1 C 0 I 438 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=113778.000000 s hg38.chr3_KI270779v1_alt 57536 249 + 205312 TCCGCCCCCTGCCAGAGTATTACTGTGTGAGCTCTGCCCC--GTCAGAG-CATT-GCTGTGTGAGCTCCGCCCCCTGCCAGAGTATTA-CTGTGTGAGCTCCACCCCCTGTC---AGC--ATTACTGTGTGAGCTCCACCCCC-------GTCGG--CATTACT-GTGTGAGCTCCGCCCCCTGCCAgagc-attactgtgtgagctctgcccc--ctgtcagagc-aTTGCTGTG-TGAGCTCCGCCCCCTGCCAGAGTATTACTGTGTGAGC s panTro5.chr3 200044861 265 + 202621043 CGCGCCCCCT-CCAGAGCATTACTGTGTGAGCTCCGCCCC-TGCCAGAGCCATTAGCTGTGTGAGCTCAGCCCCCTGCCAGAGCATTAGCTGTGAG-GCTCCGCCCCCTGCCTAGAGC-AATTACTGTGTGTACTCGCGCCCCACTGCCAGACAG--CATTACTGGTGTGAGCTCCGCCCCCTGCCAGAGCGATTACTGTGTGAGCTCCGCCCC--CTGCCAGAGCTATTACTGTGATGAGCGCCGCCCCCTGCCAGAGCA-TACTGTGTGAGC i panTro5.chr3 C 0 I 260 s nomLeu3.chr11 120803021 220 + 123690457 tctgcctcctgtcagatcattactgtgtgagctccgccccctgtcaaat-catt-actgtctgagctccgccccctgtcagatcaTTA-CTGTGTGAGCTccgcctcctgtc---agc----------------------------------------attact-gtctgagctctgcctcctgtcagatc-aTTACTGTGTGAGCTACGCCCC--CTGTCAAATC-ATTACTGTC-TGAGCTCCGCCCC--GTCAGATCATTACTGTGTGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 225898 217 + 180051392 tccgcctcctgtcagatcattactgtgtgagctccgcctc----------------------------------ctgtcagatcaTTA-CTGTGTGAGCCCCGCCCCC-GTC---AGATCATTAC--TGTGAGCCCCGCCCCC-------GTCAgatcattact-gtgtgagctccacctcctgtcagatc-aTTAC--TGTGAGCCCCGCCC---CCGTCAgatc-attactgtg-tgagctccgcctcctgtcagatcaTTACTGTGTGAGC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 208956 252 + 218577 CCCGCCCCCTGTCAGATCATTACTGTGTGAACTCCACCTC-CGTCAGAT-CATT-ACTGTGTGAACTCCG-CCTCCGTCAGATCATTA-CTGTGTGAACTCCGCCTCC-GTC---AGATCATTACTGTGTGAGCTCCGCCTCC-------GTCAGATCATTACT-GTGTGAGCTCCGCCTCC-GTCAGATC-ATTACTGTGTGAGCCCTGCCCCCTCCGTCAGATC-ATTACTGTG-TGAGCTCCGCCTCC-GTCAGATCATTACTGTGTGAGC i cerAty1.NW_012004452v1 I 438 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=12144.000000 s hg38.chr3_KI270779v1_alt 57785 33 + 205312 TCCACCCCCTGTC--AGCATTACTGTGTGAGCTCC s nomLeu3.chr11 120803241 33 + 123690457 TCCGCCTTCTGTC--agcattactgtctgagctct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226115 33 + 180051392 TCCGCCCCCTGTC--ATCATTACTGTGTGAGCCCC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 209208 34 + 218577 TCCGCCTCC-GTCAgatcattactgtgtgaactcc i cerAty1.NW_012004452v1 C 0 T 327 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C e panTro5.chr3 200045126 260 + 202621043 I a score=6929.000000 s hg38.chr3_KI270779v1_alt 57818 33 + 205312 ACC-CCCGTCAG--CATTACTGTGTGAGCTCCGCCC s nomLeu3.chr11 120803274 36 + 123690457 gcctcctgtcagatcattactgtgtgagctccgccc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226148 35 + 180051392 GCC-CCGGTCAGATCATTACTGTGTGAGCCCCGCCC i rheMac8.chr6 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e cerAty1.NW_012004452v1 209242 327 + 218577 T e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C e panTro5.chr3 200045126 260 + 202621043 I a score=6309.000000 s hg38.chr3_KI270779v1_alt 57851 16 + 205312 CCTGCCAGAGCATTAC s panTro5.chr3 200045386 16 + 202621043 CCTGCCAGGGCATTAC i panTro5.chr3 I 260 C 0 s nomLeu3.chr11 120803310 16 + 123690457 cctgtcaaatcattac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226183 15 + 180051392 -CCGTCAgatcattac i rheMac8.chr6 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e cerAty1.NW_012004452v1 209242 327 + 218577 T e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=83241.000000 s hg38.chr3_KI270779v1_alt 57867 170 + 205312 TGTGTGAGCTCCGCCCC-CTGCCAGAGCATTAC--TGTGAGCTCTGCCCCCTGTCAT--CATTACTGTGTGAGCTCCGCCCCCTGTC--ATCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCC s panTro5.chr3 200045402 111 + 202621043 TGTGT-AGCTCCGCCCCTCTGCCAgag----------------------------------------------------------------cattactgtgtgagctccgccccctgtcatatcaTTACTGTGTGAGCTCCACCCC-TGCCAGATCATTACTGTGTGAGCTCTGCCC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120803326 172 + 123690457 tgtctgagttccgcccc-ctgtcagatcaTTACTGTGTGAGCTccgccccctgtcag--cattactgtctgagctccgcctcctgtcagatcaTTAC--TGTGAGCTCTGCCCCCTGTCAAATcattactgtctgagctccgccccctgtcagatcaTTACTGTGTGAGCTCCGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226198 143 + 180051392 tgtgtgagctccgcctc-ctgtcagatcattactgtgtgagctccgcctcct--------------------------------gtcagatcaTTACTGTGTGAGCCCCGCCCCCTGTCAGATCGTTACTGTGTGAGCCCCGCCCC-CGTCAGATCATTACTGTGTGAGCCCCGCCC i rheMac8.chr6 C 0 I 8 s cerAty1.NW_012004452v1 208915 173 + 218577 TGTGTGAGCTCCGCCCC-CTGTCAGATCATTACTGTGTGAGCCCCGCCCCCTGTCAGATCATTACTGTGTGAACTCCACCTCC-GTCAGATCATTACTGTGTGAACTCCGCCTCC-GTCAGATCATTACTGTGTGAACTCCGCCTC-CGTCAGATCATTACTGTGTGAGCTCCGCCT i cerAty1.NW_012004452v1 T 327 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=12422.000000 s hg38.chr3_KI270779v1_alt 58037 34 + 205312 GCTGTC--ATCATTACTGTGTGAGCTCCGCCCCC----TG s panTro5.chr3 200045513 37 + 202621043 -CCGTC--GTCATTACTGTGTGAGCTCCGCCCCTGTCATG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120803498 33 + 123690457 -CTGTC--ATCATTACTGTCTGAGCTCCGCCTCC----TG i nomLeu3.chr11 C 0 I 3 s cerAty1.NW_012004452v1 209088 39 + 218577 -CCGTCAGATCATTACTGTGTGAGCTCCGCCTCCGTCAGA i cerAty1.NW_012004452v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e rheMac8.chr6 226341 8 + 180051392 I e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=22293.000000 s hg38.chr3_KI270779v1_alt 58071 25 + 205312 TCATTACTGTGTGAGCTCCGCCCCC s panTro5.chr3 200045550 25 + 202621043 TCATTACTGTGTGAGCTCTGCCCCC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120803534 25 + 123690457 TCATTACTGTGTGAGCTCCGCCCCC i nomLeu3.chr11 I 3 C 0 s rheMac8.chr6 226349 25 + 180051392 tcattactgtgtgagctccgcctcc i rheMac8.chr6 I 8 C 0 s cerAty1.NW_012004452v1 209127 25 + 218577 TCATTACTGTGTGAGCCCTGCCCCC i cerAty1.NW_012004452v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e panPan2.chrUn_NW_014024201v1 26609 637 + 190779 M e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=30083.000000 s hg38.chr3_KI270779v1_alt 58096 62 + 205312 T--GTCATATCATTACTGTGTGAGCTCCGCCCCCTGTCATATCATTAT--TGTGagctccgcccc---------------------------------------------------------t s panTro5.chr3 200045575 117 + 202621043 T--GTCTTGTCATTACTGTGTGAGCTCCGCCCCCTGTC--ATCATTAC--TGTGAGCTCCGCCCCCTGTCAGAGCATTACTGAGCTCCGCCCCGTCCTCATTTCTGTGTGAGCTCTGCCCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27246 64 + 190779 T--GTCATATCATTACTGTGTGAGCTCTG-CCCCTGTCTTATCATTACTGTGTGAGCTCCGCCCC--------------------------------------------------------CT i panPan2.chrUn_NW_014024201v1 M 637 C 0 s nomLeu3.chr11 120803559 60 + 123690457 T--GTC--AGCATTACTGTGT--GCCCCG-CCCCTGTCAGATcattactgtgtgagctccgcccc--------------------------------------------------------ct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226374 45 + 180051392 t--gtcagatcattactgtgtgagctccgcctcctgtcagatcatta---------------------------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 209152 65 + 218577 TCCGTCAGATCATTACTGTGTGAGCTCCGCCTCC-GTCAGATCATTACTGTGTGAGCTCCGCCTCC--------------------------------------------------------- i cerAty1.NW_012004452v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e macNem1.NW_012013899v1 49960 0 - 100774 C e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=13896.000000 s hg38.chr3_KI270779v1_alt 58158 12 + 205312 gtcatatcattg s panTro5.chr3 200045692 12 + 202621043 GTCATATcattg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27310 12 + 190779 GTCATATcattg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120803619 12 + 123690457 gtcagatcatta i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012013899v1 49960 12 - 100774 GTCAgatcatta i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209217 12 + 218577 GTCAgatcatta i cerAty1.NW_012004452v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 90989 7 + 211231 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e calJac3.chr2 167063 0 - 204313951 C e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e rheMac8.chr6 226419 0 + 180051392 C e gorGor5.CYUI01002752v1 29715 0 + 41186 C a score=63071.000000 s hg38.chr3_KI270779v1_alt 58170 18 + 205312 ctgtgtgagctccgcctc s panTro5.chr3 200045704 18 + 202621043 ctgtgtgagctccgcctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27322 18 + 190779 ctgtgtgagctccgcctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29715 18 + 41186 ctgtgtgagcttcgcctc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120803631 18 + 123690457 ctgtgtgagctccgcctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226419 18 + 180051392 ctgtgtgagctccgcctc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49972 18 - 100774 ctgtgtgagctccgcctc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209229 18 + 218577 ctgtgtgaactccgcctt i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 167063 16 - 204313951 ctatgtgagctccgcc-- i calJac3.chr2 C 0 C 0 s aotNan1.NW_018494784v1 90996 17 + 211231 ctgtgtgagctccgccc- i aotNan1.NW_018494784v1 I 7 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e saiBol1.JH378155 128849 0 - 16417988 C e colAng1.NW_012116910v1 901949 1631 + 1687011 I e manLeu1.NW_012101728v1 28074 7752 - 74206 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=226087.000000 s hg38.chr3_KI270779v1_alt 58188 43 + 205312 ctgtcagatcagtggtggcattagattctcataggagtggaat s panTro5.chr3 200045722 43 + 202621043 ctgtcagatcagtggtggcattagattctcataggagtggaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27340 43 + 190779 ctgtcagatcggtggtggcattagattctcataggagtggaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29733 43 + 41186 ctgtcagatcagtggtggcattagattctcataggagtggaac i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120803649 43 + 123690457 ctgtcaggtcagtggtggcattagattctcataggagtggaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226437 43 + 180051392 ctgtcagatcagtggtggcattagattctcataggagtggaac i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 49990 43 - 100774 ctgtcagatcagtggtggcattagattctcataggagtggaac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209247 43 + 218577 ctgtcagatcagtggtggcattagattctcataggagtggaac i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35826 43 - 74206 ctgtcagatcagtggtggcattagattctcataggagtggaac i manLeu1.NW_012101728v1 I 7752 C 0 s calJac3.chr2 167079 43 - 204313951 ctgtcagatcagcggtggcattagattctcctgggagcacaaa i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 128849 43 - 16417988 cggtcagatcagcggtggcatgagactctcctgggagcccgaa i saiBol1.JH378155 C 0 I 1 s aotNan1.NW_018494784v1 91013 43 + 211231 ctgtcagatcggcggtggcattagattctcctgggagcacaaa i aotNan1.NW_018494784v1 C 0 I 1 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e cebCap1.NW_016108150v1 231184 34 + 306014 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=894409.000000 s hg38.chr3_KI270779v1_alt 58231 157 + 205312 cctgttgtgaactgcgcatgagaaggatctaggttatgccccgcttatgagaatctaatactgatgatctgagatggaaccgtttcatctccaaaccatc---------cccacacttgtcagtggaaaaagtgtcttccgtgaaaccagtccctggtgccaaaaa s panTro5.chr3 200045765 157 + 202621043 cctgttgtgaactgcgcatgcgaaggatctaggttatgtcccgcttatgagaatctaatactgatgatctgagatggaaccgtttcatctccaaacgatc---------cccacacttgtcagtggaaaaagtgtcttccgtgaaaccagtccctggtgccaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27383 157 + 190779 cttgttgtgaactgcgcatgcgaaggatctaggttatgccccgcttgtgagaatctaatactgatgatctgagatggaaccgtttcatctccaaacgatc---------cccacacttgtcagtggaaaaagtgtcttccgtgaaaccagtccctggtgccaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29776 156 + 41186 cttgttgtgaactgcgcatgcgaaggatcta-gttatgccccgcttatgagaatctaatactgatgatctgagatggaaccgtttcatctccaaaccatc---------cccacacttgtcagtggaaaaagtgtcttccgtgaaaccagtccctggtgccaaaaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120803692 157 + 123690457 cctattgtgaactgtgcatgccaagggtctaggttatgcgctgcttatgagaatctaatgctgctgatctgaggtggaaccgtttcatctccaaaccatc---------cccacacttgtccgtggaaaaagtgtcttccatgaaaccagtccctggtaccaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226480 166 + 180051392 cctgttgtgaactgcgcatgcgaaggatctaggttatgcgccgcttttgagaatttaatgctcatgatctgaggtggaaccgtttcatctccagaccatccccaccatccccacacttgtccatggaaaaagtgtgttccgtgaaaccagtccctggtgccaaaac i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 50033 166 - 100774 cctgttgtgaactgcgcatgcgaaggatctaggttatgcgccgcttttgagaatttaatgctcatgatctgaggtggaaccgtttcatctccagaccatccccaccatccccacacttgtccatggaaaaagtgtgttccgtgaaaccagtccctggtgccaaaac i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209290 166 + 218577 cctgttgtgaactgcgcatgcgaagaatctaggttatgtgccgcttatgagaatttaatgctcatgatctgaggcggaaccgtttcatctccagaccatccccaccatgcccacacttgtccatggaaaaagtgtgttccgtgaaaccagtccctggtgccaaaac i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 35869 166 - 74206 cctgttgtgaactgcgcatgcgaaggatctaggttatgtgccgcttatgagaatttaatgctcatgatctgaggcggaaccatttcatctccagaccatccccaccatgcccacacttgtccatggaaaaagtgtgttccgtgaaaccagtccctggtgccaaaac i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 167123 153 - 204313951 cctactgtgaactgcacattcgagggatctggg-----------ttatgcgagtctaatgccgatgatctgaggtggaaccgtttcgtccccaaaccatc--ccccatccccacacttgtccctggaaaaagtgtcttccatgaaaccagtccctggtgccagaaa i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 128893 161 - 16417988 ccgactgtgaactgtgcatgcgagggatctgggttatgcgctgcttatgcgagcctgatgccgct-atctgaggtggaaccgtttcatcctcaaaccatc--ccccatccccacacttggccctggaaaaagtgtc--ccatgaaaccagtccccggtgacaaaga i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 231218 162 + 306014 cctattgtgaactgcgcatgcgaggcatctgggttgtgtgctgcttatgcgagtctaatgctgag-atctgaggtgggaccgtttcatcccc-aaccatc--ccccatccccacacttgtgcctgggaaaagtgtcttccatgaaaccagtccctggtgccagaaa i cebCap1.NW_016108150v1 I 34 C 0 s aotNan1.NW_018494784v1 91057 164 + 211231 cctactgtgaactgcgcatgccagggatctgggtcatgcgctgcttgtgcgagtctaatgccgacgatctgaggtggaaccgtttcatccccagaccatc--ccccatccccacgctcgtccctggaaaaagtgtcttccatgaaaccagttcctggtgccgaaaa i aotNan1.NW_018494784v1 I 1 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e colAng1.NW_012116910v1 901949 1631 + 1687011 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C a score=149462.000000 s hg38.chr3_KI270779v1_alt 58388 16 + 205312 ggttagggactgccgG s panTro5.chr3 200045922 16 + 202621043 ggttagggactgcCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27540 16 + 190779 ggttagggactgcCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29932 16 + 41186 ggttagggactgcCAG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120803849 16 + 123690457 ggttagggaccgcCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226646 16 + 180051392 ggttagggaccgcCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296669 16 - 181584905 GGTTAGGGACCGCCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50199 16 - 100774 ggttagggaccgcCAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209456 16 + 218577 ggttagggaccgcCAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628022 16 - 91010382 GGTTAGGGACCGCCAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36035 16 - 74206 ggttagggaccgcCAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 903580 16 + 1687011 GGTTAGGGACTGTCAG i colAng1.NW_012116910v1 I 1631 C 0 s calJac3.chr2 167276 16 - 204313951 ggttagggaccactgG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 129054 16 - 16417988 ggttaggggccgctgG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 231380 16 + 306014 ggttagggaccactgG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 91221 15 + 211231 ggtta-ggaccactgG i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 57141 87 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=2351896.000000 s hg38.chr3_KI270779v1_alt 58404 238 + 205312 TTTAAATAACCAAATGCTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTGCTTTA-TTTTTAGGCTGTTCTTTTTAGAGAGCAATGA--CAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcagtatttgccattgctttcaatggtaaaaggcacaattacttttgcagcaacttaaTATTATAAATTTGTTC-TTAAAGTGTATTTTTGATAAG s panTro5.chr3 200045938 239 + 202621043 TTTAAATAACCAAATGCTAAAAGAACTGGCATAGAGGT-AAATGGGCTGCTGCTTTA-TTTTTAGGCTGTTCTTTTTAGAGAACAATGA--CAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcagtttttgccattgctttcaatggtaaaaggcacaattacttttgcagcaacttaaTATTATAAATTTGTTCCTTAAAGTGTATTTTTGATAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27556 239 + 190779 TTTAAATAACCAAATGCTAAAAGAACTGGCATAGAGGT-AAATGGGCTGCTGCTTTA-TTTTTAGGCTGTTCTTTTTAGAGAACAATGA--CAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcagtttttgccattgctttcaatggtaaaaggcacaattacttttgcagcaacttaaTATTATAAATTTGTTCCTTAAAGTGTATTTTTGATAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 29948 238 + 41186 TTTAAATAACCAAATGCTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTGCTTTA-TTTTTAGGCTGTTCATTTTAGAGAACAATGA--CAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcagtttttgccattgctttcaatggtaaaagccacgattacttttgcaccaacttaaTATGATAAGTTTGTTCCTTAAAGTGTA-TTTTGGTAAG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120803865 239 + 123690457 TTTAAATAACCAAATGCTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTACTTTA-TTTTTAGGCTGTTGTTTTTAGAGAACAATGA--CAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcggtttttgtcattgctttcaatggtaaaagccacaattacttttgcaccaccttaaTATGATAAATTTGTTCCTTAAAGTGTATTATTGGTAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226662 239 + 180051392 TTTAAATAGCCAAATACTAAAAGAACTGGCGTAGAAGTAAAATGGGCTGCTGCTTTA-TTTTTAGACTGTTCTTTTTAGAGAATAATGA--CAATTATTTCCAAGTTCGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcagtttttgccattactttcaatggtaaaagccac-attacttttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296685 235 - 181584905 TTTAAATAACCAAATACTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTTCTTTA-TTTTTAGGCTGTTCTTTTTAGAGAACAATGA--CAATTATTTCCAAGTTTGTCATTAGAAAATAGTAttaggttggtgcaaaagtaattgcagttttggccattactttcagtggtaaaagccac----aattttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50215 239 - 100774 TTTAAATAGCCAAATACTAAAAGAACTGGCGTAGAAGTAAAATGGGCTGCTGCTTTA-TTTTTAGACTGTTCTTTTTAGAGAATAATGA--CAATTATTTCCAAGTTCGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcagtttttgccattactttcaatggtaaaagccac-attacttttgtaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209472 238 + 218577 TTTAAATAGCCAAATACTAAAAGAACTGGCGTAGAAGT-AAATGGGCTGCTGCTTTA-TTTTTAGACTGTTCTTTTTAGAGAACAATGA--CAATTATTTCCAAGTTCGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcagtttttgccattactttcaatggtaaaagccac-attacttttgcaccaacttaaTATGATAAATTTATTCCTTAAAGTGTATTTTTGGTAAG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628038 235 - 91010382 TTTAAATAACCAAATACTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTTCTTTA-TTTTTAGGCTGTTCTTTTTAGAGAACAATGA--CAATTATTTCCAAGTTTGTCATTAGAAAATAATAttagggtggtgcaaaagtaattgcagttttggccattactttcagtggtaaaagccac----aattttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTTGTAAG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36051 238 - 74206 TTTAAATAGCCAAATACTAAAAGAACTGGCGTAGAAGT-AAATGGGCTGCTGCTTTA-TTTTTAGACTGTTCTTTTTAGAGAACAATGA--CAATTATTTCCAAGTTCGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcagtttttgccattactttcaatggtaaaagccac-attacttttgcaccaacttaaTATGATAAATTTATTCCTTAAAGTGTATTTTTGGTAAG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 903596 235 + 1687011 TTTAAATAACCAAATACTGAAAGAACTGGCATAGAAGT-AAATGGGCTGCTGCTTTA-TTTTTAGACTGTTCTTTTTAGAGAACAATGA--CAATTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggtgcagaagtaattgcagtttttgccattactttcagtggtaaaagccat----aattttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 167292 239 - 204313951 TCTAAGTCACCAAATACTAAAGGAACTGAAGTAGAAGT-AAATGGGCTGCTGCTTTA-TTTTTGGGCTGTTCTATTTATAGAACAATGA--CAGGTACTTCCAAGTTTGTCATTAGAAAATAATTttaagttggtgcaaaagtaattgcggtttttgccattactttcaatggtaaaagccacaattacttttgcactaacttaaTATTATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 129070 239 - 16417988 TTTAAGTAACCAAATACTGAAGGAACTGAAGTAGAAGT-AAATGGTCTGCCTCTTTA-TTTTTAGGCTATTGTTTTTATAGAATAATGA--CAGGTACTTCCAGGTTTGTCATTAGAAAATAATTttaggttgctgcaaaagtaattgcggtttttgccattactttcaatggtaaaagccacaattacttttgcaccaacttaaTATTATAAATTGGTTCCTTAAAGTGTATTTTTGGTAAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 231396 239 + 306014 TTTAAGTAACCGAATACTCAAGGAACTGAAGTAGAAGT-AAATGGGCTGCTTCTTTA-TTTTTAGGCTGTTCTTTTTATAGAACAATGA--CAGGTACTTCCAAGTTTGTCATTAGAAAATAATTttaggttggtgcaaaagtaattgcggattttgccgttactttcaatggtaaaagccacaattacttttgcaccaacttaaTATTATAAATTTGTTTCTTAAAGTGTGTTTTTGGTAAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 91236 239 + 211231 TTTAAGTAACCAAATACTAAAGGAACTGAAGTAGAAGT-GAATGGGTTGCTGCTTTA-TTTTTAGGCTGTTCTTTTTATAGAACAATGA--CAGGTACTTCCAAGTTTGTCATTAGAACATAATTttaggttggtgcaaaagtaattgcggtttttgccgttactttcaatggtaaaagccacaattacttctgcaccaacttaCTATTATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAG i aotNan1.NW_018494784v1 C 0 I 323 s otoGar3.GL873745 57228 157 + 2165740 TTTAAATAAC----TACTAAATGAGATGACATGGAAGT-AAATGGGTTTATTTTTTACTTTTTAAGCTGTTCTTTTCATAATACAATGAATTTATTTTTTCCAAAGTTATTACAAAAAGATAACT-------------------------------------------------------------------------------GTACTATAAATTTTTTCCTTAAAGTCT--TTCTGGTAAG i otoGar3.GL873745 I 87 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=28029.000000 s hg38.chr3_KI270779v1_alt 58642 3 + 205312 AAA s panTro5.chr3 200046177 3 + 202621043 AAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27795 3 + 190779 AAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30186 3 + 41186 AAA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804104 3 + 123690457 AAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226901 3 + 180051392 AAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296920 3 - 181584905 AAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50454 3 - 100774 AAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209710 3 + 218577 AAA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628273 3 - 91010382 AAA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36289 3 - 74206 AAA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 903831 3 + 1687011 AAA i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 167531 3 - 204313951 GAA i calJac3.chr2 C 0 I 360 s saiBol1.JH378155 129309 3 - 16417988 GAA i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 231635 3 + 306014 GAA i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 57385 3 + 2165740 AAA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 91475 323 + 211231 I a score=34350.000000 s hg38.chr3_KI270779v1_alt 58645 9 + 205312 -GCCGTTTTG s panTro5.chr3 200046180 9 + 202621043 -GCCCTTTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27798 9 + 190779 -GCCCTTTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30189 9 + 41186 -GCCCTTTTG i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804107 9 + 123690457 -GACCTTTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 226904 9 + 180051392 -AACCTTTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180296923 9 - 181584905 -AACCTTTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50457 9 - 100774 -AACCTTTTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209713 9 + 218577 -AACCTTTTG i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628276 9 - 91010382 -AACCTTTTG i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36292 9 - 74206 -AACCTTTTG i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 903834 9 + 1687011 -AACCTTTTG i colAng1.NW_012116910v1 C 0 C 0 s saiBol1.JH378155 129313 8 - 16417988 --ACtttttt i saiBol1.JH378155 I 1 I 307 s cebCap1.NW_016108150v1 231639 8 + 306014 --ACCttttt i cebCap1.NW_016108150v1 I 1 C 0 s otoGar3.GL873745 57388 3 + 2165740 AAA------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 91475 323 + 211231 I e calJac3.chr2 167534 360 - 204313951 I a score=115648.000000 s hg38.chr3_KI270779v1_alt 58654 23 + 205312 -----TTTTTCCTTCTGTTAAttttttg s panTro5.chr3 200046189 23 + 202621043 -----TTTTTCCTTCTGTTAAttttttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27807 21 + 190779 -----TTCTTCCTTCTGTTAAttttt-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30198 22 + 41186 -----TT-TTCCTTCTGTTAAttttttg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804116 23 + 123690457 -----TTTTTCCTTCTATTAGttttttg i nomLeu3.chr11 C 0 I 2 s rheMac8.chr6 226913 23 + 180051392 -----TTTTTCCTTCTATTAAttttttg i rheMac8.chr6 C 0 I 1 s macFas5.chr6 180296932 23 - 181584905 -----TTTGTCCTTCTATTAAttttttg i macFas5.chr6 C 0 I 1 s macNem1.NW_012013899v1 50466 23 - 100774 -----TTTTTCCTTCTATTAAttttttg i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 209722 23 + 218577 -----TTTTTCCTTCTATTAAttttttg i cerAty1.NW_012004452v1 C 0 I 1 s chlSab2.chr4 89628285 23 - 91010382 -----TTTGTCCTTCTATTAAttttttg i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36301 23 - 74206 -----TTTTTCCTTCTATTAAttttttg i manLeu1.NW_012101728v1 C 0 I 1 s colAng1.NW_012116910v1 903843 23 + 1687011 -----TTTGTCCTTCTATTAAttttttg i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 167894 18 - 204313951 -----ttttttcttctattaatt----- i calJac3.chr2 I 360 C 0 s saiBol1.JH378155 129628 18 - 16417988 -----ttttttcttctattaatt----- i saiBol1.JH378155 I 307 C 0 s cebCap1.NW_016108150v1 231647 10 + 306014 ------tttttttt-------tt----- i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 57391 12 + 2165740 AAAAATttttct---------------- i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 91475 323 + 211231 I a score=1637242.000000 s hg38.chr3_KI270779v1_alt 58677 167 + 205312 tttttttcttggtcgagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactgcagcctccacctcctgggctccagcagtcctcccacctcagcctccctaagagctgagactacaggtgtgagccaccatgcctggctaatttt s panTro5.chr3 200046212 167 + 202621043 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtgatgtgatctcggctcactgcagcctccacctcccgggctccagcagtcctcccacctcaacctccctaagagctgagactacaggtgtgagccaccatgcctggctaatttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27828 167 + 190779 gttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtgatgtgatctcggctcactgcagcctccacctcccgggctccagcagtcctcccacctcaacctccctaagagctgagactacaggtgtgagccaccatgcctggctaatttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30220 167 + 41186 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtgctgtgatctcggctcactgcagcctccacctcccgggctccagcaatcctcccacctcaacctccctaagagctgagactacaggtgtgagccaccatgcctggctaatttt i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804141 166 + 123690457 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactgcagcctccacctcccgggctccagcaat-ctcccacctcaacctccctaggagctgagactacaggcgtgagccatcatgcctggctaatttt i nomLeu3.chr11 I 2 C 0 s rheMac8.chr6 226937 167 + 180051392 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactgcaacctccaccgcccgggctccagcaatcctcccacctcagcttctcaaggagctgagactacaggtgtgagccactatgcctggctaatttt i rheMac8.chr6 I 1 C 0 s macFas5.chr6 180296956 167 - 181584905 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcagctcactacaacctccacttcccgggctccagcaatcctccagcctccgcctcccaaggagctgagactacaggtgtgagccactatgcctggctaatttt i macFas5.chr6 I 1 C 0 s macNem1.NW_012013899v1 50490 167 - 100774 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactgcaacctccaccgcccgggctccagcaatcctcccacctcagcttctcaaggagctgagactacaggtgtgagccactatgcctggctaatttt i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 209746 167 + 218577 gttttttcttgatagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctctaccgcccgggctccagcaatcctcccgcctcagcttctcaaggagctgagactacaggtgtgagccactatgcctggctaatttt i cerAty1.NW_012004452v1 I 1 C 0 s chlSab2.chr4 89628308 167 - 91010382 gttttttcttggtagagacagagtcttgtcatgctgcccaggctggagtgcagtggtgtgatctcagctcactacaacctccacttcccaggctccagcaatcctcccacctcagcctcccaaggagctgagactacaggtgtgagccaccatgcctggctaatttt i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36325 167 - 74206 gttttttcttgatagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctctaccgcccgggctccagcaatcctcccgcctcagcttctcaaggagctgagactacaggtgtgagccactatgcctggctaatttt i manLeu1.NW_012101728v1 I 1 C 0 s colAng1.NW_012116910v1 903866 166 + 1687011 tctttttcttgggagagacagagtcttgccat-ctgcccaggctggagggcagtggtgtgatctcggctcactacaacctccacttcccaggctccagcaatcctcctgcctcagcctcccaaggagctgagaccacaggtgtgagccaccatgcctggctaatttt i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 167912 154 - 204313951 tttttttcttggtagagatgggttcttgccatgctgcccaggctggagagcagtgctgtgatctcagctcactgcaacctccacctcctgggctccagcagtcctcccac-------------ggagctgagactacaggcatgagccaccatgcctggctaatttt i calJac3.chr2 C 0 I 11 s saiBol1.JH378155 129646 157 - 16417988 tttttttcttggtagagacagag--ttgccatgct-cccatgctggagagcagtgctgtgatctcggctcacggcaacctccacctcctgggctccagcaggcctcccacctcagcctcccaaggagctgagactacaggcgt-------catgcctggctaatttt i saiBol1.JH378155 C 0 I 11 s cebCap1.NW_016108150v1 231657 167 + 306014 ttttttttttttttGAGCTGTagtcttgctctgtcgcccaggctggagtgcaatgttgttatctcggctcattgcaatctccgcctcctgggttcaagcaattctcctgtctcagcctcctgagtagctgagattacaggcgtgtgccaccacgcccagctaatttt i cebCap1.NW_016108150v1 C 0 I 332 s aotNan1.NW_018494784v1 91798 167 + 211231 tttttttcttggtagagacagagtcttgccatgctgcccaggctggagagcagtgctgtgatctcagctcactgcaacctccacctcctgggctccagcagtcctcccacctcagcctcccaaggagcttagactacaggtgtgagccaccatgcttggctaatttt i aotNan1.NW_018494784v1 I 323 I 11 s otoGar3.GL873745 57403 142 + 2165740 tttttattttttttgaggcagagtcat----tgtcaccctaggtagagagctgtggcgtcg--tgggctcacagcagcctcaaactcgtaggcttaagcgattctcttaactcagcttcccaagtagc-------------------cacaacgcccagctatttct i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=7098.000000 s hg38.chr3_KI270779v1_alt 58844 1 + 205312 t s panTro5.chr3 200046379 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27995 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30387 1 + 41186 t i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804307 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227104 1 + 180051392 t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297123 1 - 181584905 t i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50657 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209913 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628475 1 - 91010382 t i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36492 1 - 74206 t i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904032 1 + 1687011 t i colAng1.NW_012116910v1 C 0 C 0 s otoGar3.GL873745 57545 1 + 2165740 t i otoGar3.GL873745 C 0 I 488 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 91965 11 + 211231 I e cebCap1.NW_016108150v1 231824 332 + 306014 I e calJac3.chr2 168066 11 - 204313951 I e saiBol1.JH378155 129803 11 - 16417988 I a score=1283620.000000 s hg38.chr3_KI270779v1_alt 58845 141 + 205312 aga-------------gacagggtttcaccctcttgcccagg-------------------------------ctggtcccaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAACGTTTCCTAAGACAAGGCAGGTCT s panTro5.chr3 200046380 141 + 202621043 aga-------------gacagggtttcaccatcttgcccagg-------------------------------ctggtcccaaactcttgggctcaagcagtcctcctgcctcagcctgccagagtattgggattataggtgtgagccactgcCAGAAAAACGTTTCCTAAGACAAGGCAGGTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 27996 141 + 190779 aga-------------ggcagggtttcacaatcttgtccagg-------------------------------ctggtcccaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAACGTTTCCTAAGACAAGGCAGGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30388 141 + 41186 aga-------------gacagggtttcaccatcttgcccagg-------------------------------ctgatcccaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggagtataggtgtgagccactgcCAGAAAAACTTTTCCTAAGACAAGGCAGGGTT i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804308 140 + 123690457 aga-------------gacagggtttcaccatcttgcccagg-------------------------------ctggtctc-aactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAACTTTTCCTAAGGCAAGGCAGGTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227105 156 + 180051392 ata--ttttttacagagacggggtttcaccatctcgcccagg--------------------------actgcttgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccgctgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297124 152 - 181584905 ata-tttttttacagagatggggtttcaccatctcgcccagg-------------------------------ctgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccgctgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50658 182 - 100774 ata--ttttttacagagatggggtttcaccatctcacccagggacggggtttcaccatctcgcccaggactgcttgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccgctgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 209914 151 + 218577 ata--ttttttacagagacggggtttcaccatcttgcccagg-------------------------------ctgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattatgggtgtgagccactgcCAGAAAAAC-TTCCCTAAGGCAAGGCAGGTTT i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628476 152 - 91010382 ata-tttttttatagagactgggtttcaccatcttgcccagg-------------------------------ctgatctcaaattcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36493 151 - 74206 ata--ttttttacagagacggggtttcaccatcttgcccagg-------------------------------ctgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattatgggtgtgagccactgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTT i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904033 154 + 1687011 atattttttttatagagaccgggtttcaccatcttgcccagg-------------------------------ctggtctcaaactcccgggctcaagccgtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAACTTTTCCTGAGGCAAGGCAGGTTT i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 168077 139 - 204313951 ------------tagagatggggtttcaccatcttgaccagg-------------------------------ctggtcttaaactcctgggctcaagcagtcctcct---tcagcctcccaaagtgttgggattataggtgtgagccgctgcCAGAAAACCTTTTCCTAAGACAAGGCAGGTTT i calJac3.chr2 I 11 C 0 s saiBol1.JH378155 129814 139 - 16417988 ------------tagagatggggtttcaccatcttgcccagg-------------------------------ctggtcttaaagtcctgggctcaagcagtcctcct---tcagcctcccaaagtgttgggcttataggtgtgagccactgcCAGGAAACCTTTTCCTAAGACGAGGCAGGTTT i saiBol1.JH378155 I 11 C 0 s cebCap1.NW_016108150v1 232156 139 + 306014 ------------tagagatggggtttcaccatcttgcccagg-------------------------------ctggtcttaaactcctgggctcaagcagtcctcct---tcagcgtcccaaagttttgggattataggtgtgagccactgcCAGAAAACCTTTTCCTAAGACATGTCAGGTTT i cebCap1.NW_016108150v1 I 332 C 0 s aotNan1.NW_018494784v1 91976 139 + 211231 ------------tagagatggggtttcaccatcttgcccagg-------------------------------ctggtcttaaactcctgggctcaagcagtcctcct---tcagcctcctagagtattgggattataggtgtgagccactgcCGGAAAACCTTCTCCTAAGATGAGGCAGGTTT i aotNan1.NW_018494784v1 I 11 C 0 e otoGar3.GL873745 57546 488 + 2165740 I e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=390785.000000 s hg38.chr3_KI270779v1_alt 58986 52 + 205312 TACATTATATTTAAA-----------TTT-----TTTTTAA-----TGATGTCTTTTTT--GGCAGTGCACAGCC s panTro5.chr3 200046521 52 + 202621043 TACATTATATTTAAA-----------TTT-----TTTTTAA-----TGATGTCTTTTTT--GGCAGTGCACAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 28137 51 + 190779 TACATTATATTTAAA------------TT-----TTTTTAA-----TGATGTCTTTTTT--GGCAGTGCACAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30529 54 + 41186 TACATTATATTTAGA---------TTTTT-----TTTTTAA-----TGATGTCTTTTTT--GGCAGTGCACAGCC i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804448 55 + 123690457 TACATTATATTTAGA----T----TTTTT-----TTTTAAA-----TGATGTCTTTTTT--GGCAGTGCACAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227261 58 + 180051392 TACATTATATTTAGA-TTTT----TTTTT-----TTTTTAA-----TGATGTCTTTTTT--GGCAGTGTACAGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297276 53 - 181584905 TACATTATATTTAGA----------TTTT-----TTTTTAA-----TGATATCTTTTTT--GGCAGTGCACAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50840 53 - 100774 TACATTATATTTAGA----------TTTT-----TTTTTAA-----TGATATCTTTTTT--GGCAGTGCACAGCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 210065 60 + 218577 TACATTATATTTAGA-TTTT----TTTTT-----TTTTTAA-----TGATGTCTTTTGTACACCAATGTACAGCC i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628628 56 - 91010382 TACATTATATTTAGA---TT----TTTTT-----TTTTTAA-----TGATATCTTTTTT--GGCAGTGCACAGCT i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36644 58 - 74206 TACATTATATTTAGA---TT----TTTTT-----TTTTTAA-----TGATATCTTTTGTACACCAATGTACAGCC i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904187 59 + 1687011 TACATTATATTTAGATTTTT----TTTTT-----TTTTAAA-----TGATGTCTTTTTC--GGCAGTATACAGCC i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 168216 65 - 204313951 TACATTATATTTAGC---TCTTTTTTTGTGTGTGTTTTGAA-----TGAAGTCTTTTTT--CGCAGTGCACAGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 129953 61 - 16417988 TACGTTAGACGTAGC---TC----TTTGTGTGTGTTTTGAA-----TGATGTCTTTTTT--GGCAGTGCACAGCT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 232295 61 + 306014 TACATTATACATAGC---TC----TTTTTGTGTGTTTTGAA-----TAATGTCTTTTTT--GGCAGTGCACAGCT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 92115 61 + 211231 TACATTATATGTAGC---TC----TTTTTTTGTGTTTTGGA-----TGATGTCTTTCTT--GGCAGTGCACAGCT i aotNan1.NW_018494784v1 C 0 I 34 s otoGar3.GL873745 58034 59 + 2165740 TATATTATATTTAGG---TTGCCCCCCCC-----TTTTGAATAATTTAATGTCTTTGTT--GGCAGTTG------ i otoGar3.GL873745 I 488 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=192645.000000 s hg38.chr3_KI270779v1_alt 59038 29 + 205312 AGAGGACAACACATCAC---ACACAAGAAACA s panTro5.chr3 200046573 29 + 202621043 AGAGAACAACACATCAC---ACACAAGAAACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 28188 29 + 190779 AGAGAACAACACATCAC---ACACAGGAAACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30583 29 + 41186 AGAGAACAACACATCAC---ACACAGGAAACA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804503 29 + 123690457 AGAGAACAACACATCAC---ACACAGGAAACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227319 29 + 180051392 AGAGAATAACACATCAC---ACACAGGAAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297329 29 - 181584905 AGAGAACAACACATCAC---GCAGAGGAAACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50893 29 - 100774 AGAGAATAACACATCAC---GCAGAGGAAACA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 210125 29 + 218577 AGAGAATAACACATCAC---GCAGAGGAAACA i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628684 29 - 91010382 AGAGAACAACACATCAC---GCAGAGGAAACA i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36702 29 - 74206 AGAGAATAACACATCAC---GCAGAGGAAACA i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904246 29 + 1687011 AGAGAACAACACATCAC---GCAGAGGAAACG i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 168281 29 - 204313951 -GAGAAcccctcaccacagaagacaggaaa-- i calJac3.chr2 C 0 I 5 s saiBol1.JH378155 130014 29 - 16417988 -GAGAACCCCACACCACAGAAGACAGGAaa-- i saiBol1.JH378155 C 0 I 5 s cebCap1.NW_016108150v1 232356 29 + 306014 -GAGAACCCCACACCACAGAAGACAGGAaa-- i cebCap1.NW_016108150v1 C 0 I 5 s otoGar3.GL873745 58093 29 + 2165740 AGTGGCTGGTATATTAC---GTACAGGAAACA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I e aotNan1.NW_018494784v1 92176 34 + 211231 I a score=163086.000000 s hg38.chr3_KI270779v1_alt 59067 23 + 205312 --------GTTGTGCTCATGTGATGGGG----GCc s panTro5.chr3 200046602 23 + 202621043 --------GTTGTGCTCATGTGATGGGG----GCc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 28217 23 + 190779 --------GTTGTGCTCATGTGATGGGG----GCc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30612 23 + 41186 --------GTTGTGCTCTTGTGATGGGG----GCc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804532 23 + 123690457 --------GTTGTGCTCATGTGATGGGG----GCc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227348 22 + 180051392 --------GTTGTGCTTATGTGAT-GGG----GCc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297358 22 - 181584905 --------GTTGTGCTTATGTGAT-GGG----GCc i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50922 22 - 100774 --------GTTGTGCTTATGTGAT-GGG----GCc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 210154 22 + 218577 --------GTTGTGCTTATGTGAT-GGG----GCc i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628713 22 - 91010382 --------GTTGTGCTTATGTGAT-GGG----GCc i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36731 22 - 74206 --------GTTGTGCTTATGTGAT-GGG----GCc i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904275 22 + 1687011 --------GTTGTGCTTATGTGAT-GGG----GCc i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 168315 25 - 204313951 --------gctgtgcccacgtgat-ggg-cactcc i calJac3.chr2 I 5 C 0 s saiBol1.JH378155 130048 25 - 16417988 --------gctgcgcccatgtgat-ggg-cactcc i saiBol1.JH378155 I 5 C 0 s cebCap1.NW_016108150v1 232390 25 + 306014 --------gctgcgcccatgtgat-ggg-cactcg i cebCap1.NW_016108150v1 I 5 C 0 s aotNan1.NW_018494784v1 92210 25 + 211231 --------gccgtgcccatgtgat-ggg-cactcc i aotNan1.NW_018494784v1 I 34 C 0 s otoGar3.GL873745 58122 34 + 2165740 ATGGCTGCATTGTGCAcatataac-agaatgcttc i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=2644868.000000 s hg38.chr3_KI270779v1_alt 59090 290 + 205312 tcagcactaggaaggagtggactgttggcgcacgcagcagcttgaataaatctgaa---------agtcactacgctgcgtaagagaagccaaat----aaagcgcatg---ctg--tg----------tacagagggtgtcgagaatgcct----ccta---cgtga----cggaaagcagatccgtgg-ttccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATTACCTTCTGCGCATTATACC--ACAAAAA-AG--------CTGGGAATAAAAATGCTAACCAAAAAAAA-AGGTGAAAGTa-ga s panTro5.chr3 200046625 289 + 202621043 tcagcactaggaaggagtggactgttggcgcacgcagcagcttgaataaatctgaa---------agtcactacgctgcgtaagagaagccaaat----aaagcgcatg---ctg--tg----------tacagagggtgtcgagaatgtgt----ccta---cgtga----cggaaagcagatccgtgg-ttccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATTACCTTCTGCACATTACACC--ACAGAAA-AG--------CTGGGAATaaaaatgctaaccaaaaaaaa--ggtgaaagta-ga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 28240 289 + 190779 tcagcactaggaaggggtggactattggcgcatgcagcagcttgaataaatctgaa---------agtcactacgctgcgtaagagaagccaaat----aaagcgcatg---ctg--tg----------tacagagggtgtcgagaatgtgt----ccta---cgtga----cggaaagcagatccgtgg-ttccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---GCAGGTA--GAATGCGTTCATTACCTTCTGCACATTACACC--ACAAAAA-AG--------CTGGGAATAAAAATGCTAACCAAAAAAAA--GGTGAAAGTa-ga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30635 291 + 41186 tcagcactaggaaggagtggactattggcgcacgcagcagcttgaataaatctgaa---------agtcactacgctgcgtaagagaagccaaat----aaagcgcatg---ctg--tg----------tacagagggtgtcgagaatgcct----ccta---cgtga----cggaaagcagatctgtgg-ttccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATTACCTTCCGGACATTACACC--ACAAAAA-AG--------CTGGGAATAAAAATGCTAACCAAAAAAAAAAGGTGAAAGTa-ga i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804555 295 + 123690457 tcagcacta-gaaggagtggactattggcacacgcagcagcttgaataaatctgaa-------acagtcaccacgctgcgtaagagaagccaaat-aaaaaagcgcatg---ctg--tg----------tatagagggtgtcgagaatgcct----cctg---cgtga----cagaaagcagatCCATGC-TTCCTTGCAGACT------GGCAAGAGCAG----ATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTCCACC--ACAAAAA-AG--------ctggtaattaaaatgctaaccaaaaaaca-aggtgaaaccagga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227370 295 + 180051392 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaat-aaaaaagtgcatg---ctg--tg----------tACAGAGGGTGTCGAGAATGCCT----CCTG---TGTGA----CGGAAAGCAGATCCGTGG--TTCCTGCAGACT------GGCAGGAGCAG----ATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTACACCAAAAAAAAA-Ag--------ctggtaataaaaatgctaaccaaaaaaaa-aggtgaaactagga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297380 293 - 181584905 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaat-aaaaaagtgcatg---ctg--tg----------tacagagggtgtcgagaatgcct----cctg---tgtga----cagaaagcagatccgtgg--ttcctgcagact------ggCAGGAGCAG----ATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTACACC--AAAAAAA-AG--------CTGGtaataaaaatgctaaccaaaaaaaa-aggtgaaactagga i macFas5.chr6 C 0 C 0 s macNem1.NW_012013899v1 50944 293 - 100774 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaat-aaaaaagtgcgtg---ctg--tg----------tacagagggtgtcgagaatgcct----cctg---tgtga----cggaaagcagatccgtgg--ctcctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---gcaggta--gaatgtgttcattaccttCTGTGCATTACACC--AAAAAAA-Ag--------ctggtaataaaaatgcgaaccaaaaaaaa-aggtgacactagga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 210176 291 + 218577 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaat-aaaaaagtgcacg---ctg--tg----------tACAGAGGGTGTCGAGAATGCCT----CCTG---TGTGA----CGGAAAGCAGATCCGTGG--TCCCTGCAGACT------GGCAGGAGCAG----ATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATCACCTTCTGTGCATTACACC--AAAAAAA-Ag--------ctggtaataaaaatgctaacc--aaaaat-tggtgaaactagga i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89628735 305 - 91010382 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaaagtcactatagtcactatgctgcgtaagagaagccaaat-aaaaaagtgcatg---ctg--tg----------tacagagggtgtcgagaatgcct----cctg---tgtga----cggaaggcagatctgtgg-ttccctgcagact------ggCAGGAGCAG----ATTCTTAAGGCACAGGAAGAAGCTTGCAGCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTACACC--AAAAAAA-AG--------CTGGtaataaaaatgctaacc-aaaaaaa-aggtgaaactagga i chlSab2.chr4 C 0 C 0 s manLeu1.NW_012101728v1 36753 293 - 74206 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaat-aaaaaagtgcacg---ctg--tg----------tacagagggtgtcgagaatgcct----cctg---tgtga----cggaaagcagatccgtgg--tccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATCACCTTCTGTGCATTACACC--AAAAAAA-Ag--------ctggtaataaaaatgctaaccaaaaaaaa-aggtgaaactagga i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904297 292 + 1687011 tcagcactaggaaagagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaat-aaaaaagtgcatg---ctg--tg----------tacagagggtgtcgagaatgcc-----ccta---tgtga----gggaaagcagatccgtgg-ttccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATGACCTTCTGTGCATTACACC--ACAAAAA-Ag--------ctggtaataaaaatgctaacc-aaaaaaa-aggtgaaactagga i colAng1.NW_012116910v1 C 0 C 0 s calJac3.chr2 168340 275 - 204313951 tcagcactgggaaggaatgcactattggcacacacagcagcttggatcaatctgaa---------agtcactacactgagttagagaagccaaataaaaagagtatagg---ctg--tgtgactccaCGTGC--ACAGTGTCGA-----------------------------------------CACGG-TTCCCTGCAGAGT------GGCAGGAGCAG----ATTCCAAAGGCACAGGAAGAAGCTT---GCGGGTA--GAATGTGTTCAATCCCTTCTGCACATTATACC--ACAAAAAGAG--------CTGGtaataaaaatgctaaccaaagaaaaaaggcgaaactagga i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 130073 306 - 16417988 tcagccctgggaaggaatgcaccgttggcacacacagcagcttggatcgatctgaa---------agtcactacactgagttagagaaggcaatt--gaagagcacggg---ctg--tgtgactccacatacagagagtgtcgag-atgcttcttgcctg---cat-a----tggaaagcagat-catgg-ttccctgcagact------ggcaggagcag----attccaaaggcacaggaagaagctt---gtgggTA--GAATGTGTTCAGTCCCTTCTGCACATGACACC--ACAAAAAGAG--------CTGGTAATAAACATGCTAACCAAAGAAAAAAGGCGAAactagga i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 232415 306 + 306014 tcagcactgggaaggaatgcactgttggcacacacagcagcttggatcaatctgaa---------agtcactacactgagttagagatgccaaat---aaaagcgcggg---ctg--tgtgagtccacgtgcagagcgtgtagag-atgcttcctgcctg---cgtaa----tggaaagcagat-catgg-ttccctgcagact------ggcgggagcag----attccaaaggcacaggaagaagctt---gcgggTA--GAATGTGTTCAATCCCTTCTGCACATTACACC--ACAAAAAGAg--------ctgatagtaaaaatgctaaccaaaggaaaaaggccaaaccagga i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 92235 309 + 211231 tcagcactgggaaggaatgcactgctggcacacacagcagcttggatcaatctgaa---------agtcactacactgagttagagaagccagataaaaagagtgcggg---tcg--tgtgattccacgtacagagagtgtcgag-aTGCCTCCCGCCTG---CGTAA----TGGAAAGCCGAC-CGTGG-TTCCCTGCAGACT------GGCAGGAGCAG----ATTCCGGAGGCACAGGAAGCAGCTT---GCGGGTG--GAACGTGTTCAATCCCTTCTGCACGTTACGCC--ACAAAAAGAg--------ctggtaataaaaatgctaaccaaagaaaaaaggcgaaactagga i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 58156 293 + 2165740 tctgccataacaaggaatgagttgttggtacatggggcagcttgaatgaatctcat---------aatcattctgctaagtaagagaacctaaat-aaaaaagaggatgtgcctg--tg----------tg---------------attcca----ttta---tgtaaagcctggagggcagatcagtggtttgcttgtaaact------tggaggggtggagaaattataaaggggc-gaaggaaactt---gtaggTA--GAGTATGTTTATTATCTTCTGCTAATTACACC--TTAAGAAGAGTATAGTTTTTGGT--TAAAAATGCTAACCAAAAAAGG-----GATTctaaga i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46099627 294 - 120421639 tcactactagaaaaggacgggct-ttggtatacacagcagcatggatgaatctcaa---------tgctattgacaagggtaaga------agtc-aagaaggtacaca---ctgattg----------cacttgaagtctagaaactgcta----actgacatgtaa----ta-acagaagatcagTAG-CTCTATGCAGATTTGGAAAAGGAGGAAGAG----GTCCCTAAGAT-TAGGAGGAAAGCT---TTATGTGATAATTATGTTTGTTATTTTCTGCTAATTATACC--TCAA----AA--------CTTAAAAAagaaggaagaggaggaagaag-aggaggaaagaga- i mm10.chr13 I 696 I 2341 e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=2517858.000000 s hg38.chr3_KI270779v1_alt 59380 297 + 205312 taaaatttctcaactgtgtgatgggtaaacg--tgcaggtttgctgtcatgctttgtttatgaagctgtggggtacaaggactctcatacgtcactgtggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaac--gacatg-gcatttgcccttagactcagcaattcta-gaatctgcctcaaaaaaaactctggcaaagaaatgaaaggactttatccacagagttcttttcacagcctgaatgtgtttgccacaaagttcttcactgtggcattt----------gtaaa s panTro5.chr3 200046914 297 + 202621043 taaaatttctcaactgtgtgatgggtaaacg--tgcaggttggctgtcatgctttggttatgaagctgtggggtacaaggactctcatacgtcactgcggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaac--tacatg-gcatttgcccttagactcagcaattcta-gaatctgcctcaaaaaaaactctggcaaagaaatgaaaggactttacccacagagttcttttcacagcctgaatgtgtttgccacaaagttattcactgtggcgttt----------gtaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 28529 295 + 190779 taaaatttctcaactgtgtgatgggtaaacg--tgcaggtttgctgtcatgctttggttatgaagctgtggggtacaagga--ctcatacgtcactgtggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaac--tacatg-gcatttgcccttagactcagcaattcta-gaatctgcctcaaaaaaaactctggcaaagaaatgaaaggactttacccacagagttcttttcacagcctgaatgtgtttgcaacaaagttcttcactgtggcgttt----------gtaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 30926 297 + 41186 taaaatttctcaactgtgtgatgggtaaacg--tgcaggtttgctgtcatgctttgtttatgaagctgtggggtacaaggactctcatacgtcactgcggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctgacaaaac--tacatg-gcatttgcccttagactcagcaattcta-gaatctgcctcaaaaaaaactctggcaaagaaatgaaaggactttacacacagagttcttttcacaacctgaatgtgtttgcaacaaagttcttcactgtggcgttt----------gtaaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120804850 296 + 123690457 taaaatttctcaactgtatgatgggtaaacg--tgtaggtttgctgtcatgctttgtttatgaagctgtgtggtacaaggactctcatacgtcactgtggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaac--tacatg-gcatttgccctttgactcagcaattcta-gaatcttcctc-aaaaaaactctggcaaagaaatgaaaggactttacgcacagagttcttttcacagcctgaatgtgtttgcaacaaagttcttaactgtggcattt----------gtaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227665 294 + 180051392 tgaaatttcttacctgtgtgattagtaaacg--tgcaggtttgccatcatgctttgtttatgaagctgtggggtacaaggactctcatacctcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggcagcgtctaacgaaag--tatgta-gcatttgccctttgagtcagcaattctg-gaatctgcatcaaaaaaa---ctggaaaagaaatgaaaggactttatgcacagagttcttttgacagcctgaatgtgtttgcaaccaagttcttcactgtggcattt----------gtaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 180297673 296 - 181584905 tgaaatttcttacctgtgtgattggtaaacg--tgcaggtttgccatcatgctttgtttatgaagctgtggggtacaaggactctcatacctcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggcagcatctaacaaaac--tatgtg-gcatttgccgtttgactcagcaattcta-gaatctgcctcaaaaaaa-ctctggcaaagaaatgaaaggactttacgcacagagttcttTTCACAGTCTGAATGTGTTTACAACAAACTTCTTCACTGTGGCGTTT----------GTAAA i macFas5.chr6 C 0 N 0 s macNem1.NW_012013899v1 51237 294 - 100774 tgaaatttcttacctgtgtgattggtaaccg--tgcaggtttgccatcatgctttgtttatgaagctgtggggtacaaggactctcatacctcactgtggaatgcagaacgctgcagcctcgtggaagaggatttggcagcgtctaacgaaag--tatgta-gcatttgccctttgactcagcaattctg-gaatctgcatcaaaaaaa---ctggaaaagaaatgaaaggactttacgcacagagttcttttgacagcctgaatgtgtttgcaaccaagttcttcactgtggcattt----------gtaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 210467 294 + 218577 tgaaatttcttacctgtgtgattggtaaacg--tgcaggtttgccgtcatgctttgtttgtgaagctgtggggtacaaggactctcacacctcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggctgcgtctaacgaaag--tatgta-gcatttgccgtttgactcagcaattctg-gaatctgcatcaaaaaaa---ctggaaaagaaatgaaaggactttatgcacagagttcttttgacagcctgaatgtgtttgcaaccaagttcttcactgtggcattt----------gtaaa i cerAty1.NW_012004452v1 C 0 C 0 s chlSab2.chr4 89629040 296 - 91010382 tgaaatttcttacctgtgtgattggtaaacg--tgcaggtttgccatcatgttttgtttatgaagctgtggggtacaaggattctcgtacgtcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggcagcgtctaacgaaag--tatgtg-gcatttgccctttgactcagcaattcta-gaatctgcctcaaaaaaa-ctctggcaaagaaatgaaaggactttacgcacagagttcttttcacagcCTGAATGTGTTTACAACAAAGCTCTTCACTGTGGCATTT----------GTAAA i chlSab2.chr4 C 0 N 0 s manLeu1.NW_012101728v1 37046 294 - 74206 tgaaatgtcttacctgtgtgattggtaaacg--tgcaggtttgccgtcatgctttgtttgtgaagctgtggggtacaaggactctcacacctcactgtggaatgcagaacggtgcagcctcgtggaagaggatttggcagcgtctaacgaaag--tatgtg-gcatttgccgtttgactcagcaattctg-gaatctgcctcaaaaaaa---ctggaaaagaaatgaaaggactttatgcacagagttcttttgacagcctgaatgtgtttgcaaccaagttcttcactgtggcattt----------gtaaa i manLeu1.NW_012101728v1 C 0 C 0 s colAng1.NW_012116910v1 904589 297 + 1687011 tgaaatttctcacctgtgtgattggtaaacg--tgcaggtttgccatcatgctttgtttatgaagctgt-gggtacaaggactctcatacgtcactgtggaacgcagaacgtcgcagcctcgtggaagaggatttggcagcgtctaacaaaaaactatgtg-gcatttgccctttgactcagcaattcta-gaatctgcctcaaaaaaa-ctctggcaaagaaatgaaaggattttatgcacagagttcttttcacagcCTGAATGTGTTTACAACAAAGTTCTTCACTGTGGCATTT----------GTAAA i colAng1.NW_012116910v1 C 0 N 0 s calJac3.chr2 168615 282 - 204313951 taaagtgtctcacccgtgtgactggtaaaca--ggcaggtttgctgtcaggcttcgtttgtgaagatgtagggtacaaggactc----acaccggtgtggagtgcagaatgctgcggcctcagggaagaggatttgtcagcatctgac--agc--tgcatg-gcatttgctctttgacttaacaattctagggatctgtctctaagaca-ctctggcggagaaatgaaag-----------------ccttctcacggcctgagtgtgtctg--acaaagttcttcaccgtggcattgaagaaccggaataat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 130379 274 - 16417988 taaaatgcctcagctgtgtgactggtaaaca--ggcaggtttgctgtcatgcttcgtttatgaagctgtagggtacaaggactc----gcatcactgtggagtgcagaatgctgcagcctcgtggaagaggatttg-cagcatctaaa--aac--tgcatg-gcatttaccctttgacttagcaattctaggaatctgtctctaaaaca-ctctggcagagaaatgaaag----------------ttctcttcacagcctgagtatgtttgtaaaacagttcttcaccgtggcattt----------gtaat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 232721 277 + 306014 taaaatgtgtcagctgtgtgactggtaaaca--ggcaggtttgctgccatgcttcgtttatgaagctgtggggtccaaggactc----acgtgactgtggagtgcagaatgctgcagcctcatggaagaggatttggcagcgtctaacaaaac--tgcatg-gcatttgccatttgacttagcaattctaggaatctgtctccaaaaca-ctctggcagagaaatgaaag----------------ttctcttcacagcctgagtgtgtttgtaacaaagttcttcaccgtggcattt----------gtaac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 92544 261 + 211231 taaaacgtctcacctgtgtgactggtaaaca--ggcagggctgctgtcacgcttcatttatgaagctgt-gggtacaaggactc----acgtcactgtgag-----------tgcagcctcacggaggagcatttggcagcgtctaacaaaac--tgcatg-gcatctgccc--tgacttagcaattctaggaa--tgtctctaaaaca-ctctggcagagaaaggaaag----------------ttctcttcacagcctgagtgtgtctgtaacacagttcttcaccgtggcattt----------gtaat i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 58449 213 + 2165740 taaagt-tctcatctctatgaggggttaacatctgaaagtttaccatcagg----atttcaggaactgttggatacagagactcccatgtgt-----tggaacacagaatgttatacctccaccgaagaggatttggcaccatctaacaaaac--tacacatgcaattaccatttgggccagcagttataggaatctaC------------------------------------------------------------------------------AAATTATTCATTGTGTAATTT----------GCAAT i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=1506132.000000 s hg38.chr3_KI270779v1_alt 59677 257 + 205312 actggaaacaatcaaaatgtccatcagt-aagggattaggaacattaattcgtgcagtggggaactccgtaccagaaggaggaatgaggaaCGCCTAT---TGATAAGGGGCAGAGTACATATAATATAATGCAAATATATATTTGC-----TTTTTCTTAAAACAGTACAAAGATAAAAATCTAAAGTGGTTGCTGTGGAGGACaggggtcagtggtgg--aagtgagac-cgaaatagactctgaagtaata-tctggacttt-gaaat s panTro5.chr3 200047211 256 + 202621043 actggaaacaatcaaaatatccatcagt-aggggattaggaacattaattcgtgcagtggggaactccgtaccagaaggaggaatgaggaaCGCCTAT---TGATAAGGGGCAGAGTGCATATCATATGATGCAAATATATATT-GC-----TTTTTCTTAAAACAGTACAAAGATAAAAATCTAAAGTGGTTGCTGTGGAGGACaggggtcagtggtgg--aagtgagac-cgaaatagactctgaagtaata-tctggacttt-gaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 28824 258 + 190779 actggaaacaatcaaaatgtccatcagtaaggggattaggaacattaattcatgcagtggggaactcagtaccagaaggaggaatgaggaaggcctAT---TGATAAGGGGCAGAGTACATATCatatgatacaaatatatatttgc-----tttttcttaaaacagtacaaagataaaaatctaaagtggttgctgtggaggacaggggtcagtggtgg--aagtgagac-cgaaatagactctgaagtaata-tctggacttt-gaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 31223 257 + 41186 actggaaacaatcaaaatgtccatcatt-aggggattaggaacattaattcgtgcagtggggaactccgtaccagaaggaggaatgaggaaggcctat---tgataaggggcagagtacatatcatatgatgcaaatatatatttgc-----tttttcttaaaacagtacaaagataaaaatctaaagtggttgctgtggaggacaggggtcagtggtgg--aagtgagac-cgaaatagactctgaagtaata-tctggacttt-gaaat i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120805146 256 + 123690457 actggaaacaatcaaaatgtccatcagt-aggggattaggaacattaattcgtacagtggagaactcagtaccagaaagaggaatgaggaatgcctat---tgataa-gggcagagtgcatataatataatgcaaatatatatttgc-----tttttcttaaaacagtacaaagataaaaaactaaagtggttgctgtggaggacaggggtcagtggtgg--aagtgagac-cgaaatagactctgaagtaata-tctggacttt-gaaat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 227959 255 + 180051392 accggaaacaatcaaaatgtccatcagt-aggggattaggaacattaatttgtacagtggggaactcagtaccagaaggaggtatgaggaaggcctAT---TGATAAGGAGCAGAGTACATATAATATAATGCAGATATGTATTTGC-----TTTTTCTTAAAACAGTACAAAGATGGAAAACTAAAGTGGTTGCTGTGGAGGAC--GGGTCAGTGGTGG--AAGTGAGAC-TGAAATAGACTCTGAAGTAATA-CCTGGACCTT-GAAAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51531 257 - 100774 accggaaacaatcaaaatgtccatcagt-aggggattaggaacattaatttgtacagtggggaactcagtaccagaaggaggaatgaggaaggcctAT---TGATAAGGAGCAGAGTACATATAATATAATGCAAATATGTATTTGC-----TTTTTCTTAAAACAGTACAAAGATGGAAAACTAAAGTGGTTGCTGTGGAGGACAGGGGTCAGTGGAGG--AAGTGAGAC-TGAAATAGACTCTGAAGTAATA-CCTGGACCTT-GAAAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 210761 257 + 218577 accggaaacaatcaaaatgtccatcagt-aggggattaggaacattaatttgtacagtggggaactcagtaccagaaggaggaatgaggaaggcctAT---TGATAAGGGGCAGAGTACatataatataatgcaaatctgtatttgc-----tttttcttaaaacagtacaaagatgaaaaactaaagtggttgctgtggaggacaggggtcagtggtgg--aagtgagac-cgaaatagactctgaagtaata-cctggacctt-gaaat i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 37340 257 - 74206 accggaaacaatcaaaatgtccatcagt-aggggattaggaacattaatttatacagtggggaactcagtaccagaaggaggaatgaggaaggcctAT---TGATAAGGGGCAGAGTACATATAATATAATGCAAATCTGTATTTGC-----TTTTTCTTAAAACAGTACAAAGATGAAAAACTAAAGTGGTTGCTGTGGAGGACAGGGGTCAGTGGTGG--AAGTGAGAC-CAAAATAGACTCTGAAGTAATA-CCTGGACCTT-GAAAT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 168897 246 - 204313951 actggaaacaatacaaacgtccgtcagt-cggggattaggaacattaactcccacagtgagtaactcagtacaggaagaaggaatgaggaaggc---c---tGAGGAGGGGCAGAGTACCTATGATATAATGCAAATATATATTTGC-----TTTTTCTTAAAACAGCAGAAAGAT-------TAGTGTGGTTGCTGTAGGGGAT-GGGGTCTGTGGTG---AAGAAAAAC-TGAAATCGATTCTGAAGTAATACTTTGGACTTT-GAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 130653 253 - 16417988 actggaaacaatacaaacgtccatcagt-cggggattaggaacattaattcccacagtgagtaactcagtacaggaagaaggaatgaggaaggcctAC---TGATGAGGGGCAGAGTACATGTGataaaatgcaaatagatacttgc-----tttttcttaaaacagcagaaagat-------taacgtggttgctgtaggggataggggtcagtggtggaaaaaaaaaac-tgaaatagattctgaagtaatactttggacttt-gaaat i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 232998 256 + 306014 actggaaacaatacaaacgtccatcagt-cggggattaggaacattaattcccacagtgagtaactcagtacaggaagaaggaatgaggaaggcctAC---TGATGAGGGGCAGAGTACATGTGAGATAATGCAAATAGATATTTGC-----TTTTTCTTAAAACAGCAGAAAGATAAA---CTAACGTGGTTGCTGTAGGGGATAGCGGTCAGTGGTGGG-AAAAAAAAC-TGAAATAGATTCTGAAGTAATACTTTGGACTTT-GAAGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 92805 233 + 211231 actggaaacggtacagacgtccatcagt-cggggactaggaacattaattcccacagtgagtaactca-tacgggaagaaggaatgaggaaggcctcC---TGATGAGGGGCAGAGTACTTATGATATAATGC----------------------------AAGCAGCAGAAAGATAAA---CGAACGTGGTTGCTGTAGGGGATAGGGGTCAGTGGTGGA-AAAAAAACC-TGAAATACATTCTGAAGTAATACTTTGGACTTTAAAAAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 58662 249 + 2165740 ATTGGAAAC--TAAAAACATCTGTCAGT-TGTGGATGAGGCACCTTTGTTCATGCAGTTAGG---------------GGAGAATTGAGGAGGACCTGTGAATGGTCAGTTGCAGA-CAGAAGTGATCAAAGTCAAAGACAGAAGTGCTTCCTTTTCTCCTAAAACTCTAGAAAGAAAAAACACTAAAGTGGTTGCTATGGAGAACAGGGGACAGTGGCGC--CAGTGAGCCTCTAAATACACTCCGAGGTAATGCACTAGATTGT-GAATT i otoGar3.GL873745 C 0 I 176 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=2020336.000000 s hg38.chr3_KI270779v1_alt 59934 312 + 205312 tgtaagtgttttaca-tattaccaaact-aagtttttaagatagtccctaaaattgaaagaatggtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCGCCAACCCTGAGACAAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAAGTGGGAGGTGAGACAGGAAAGAGG--CGGCAGCATGGGGCGTCCGGGAGCCGGGTCTCAT-GTGGACAGC-TGGGCCCGTGTTCA-CTGTGGGAGCTGGTGCGTTCCTTCACCA-GCCCACGCTGCACAGGTTCAGGATGGTCAATTCCGGGCA s panTro5.chr3 200047467 312 + 202621043 tgtaagtgttttaca-tattaccaaact-aagtttttaagatagtccctaaaattgaaagaatggtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCGCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAAGTGGGAGGTGAGACAGGAAAGAGG--CGGCGGCACGGGGCGTCCGGGAGCCGGGTCCCAT-GTGGACAGC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGTGTTCCTTCACCA-GCCCACGCTGCACAGGTTCAGGATGGTCAATTCCGGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29082 313 + 190779 tgtaagtgttttacattattacccaact-aagtttctaagatagtccctaaaattgaaagaatggtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCGCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAAGTGGGAGGTGAGACAGGAAAGAGG--CGGTGGCACGGGGCGTCCGGGAGCCGGGTCCCAC-GTGGGCAGC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGTGTTCCTTCACCA-GCCCATGCTGCACAGGTTCAGGATGGTCAATTCCAGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 31480 311 + 41186 tgtaagtgttttaca-tattaccaaact-aagtttttaagatagtccctaaaattgaaagaatggtatctgaaatgaatgaatctaaATTCCTTGGATTGTATTCTAC-AGGCTCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAAGT-GGAGGTGAGATAGGAAAGAGG--CGGTGGCACGGGGCGTCCGGGAGCCGGGTCCCAT-GTGGACAGC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGTGTTCCTTCACCA-GCCCATGCTCCACAGGTTCAGGATGGTCAATTCCGGGCA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120805402 311 + 123690457 tgtaagtgttttaca-tattaccaaact-aagtttttaagatagtccctaaaattgaaagaatagtatctgaaatgaatgaatctaTATTCCTTGGATTGCATTCTAC-AGGTGCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCAGGGCTGCTGAAGGGAAGCGGGAGGTGACACAGGAAAGAGG--TGGCGGCACGGGGT------GAGCCAGGTCCCAT-GTGGGCAGC-TGGGCCTGTGCTCA-CTGTGGGAGCTGGTGTGTTCCTTCACCA-GCCCACGCTCCACAGGCTCAGGACGGTCAATTCCGGGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 228214 312 + 180051392 TTTAAATGTTTTACA-TATTACCAAACT-AAGTTTTTAAGATAGTCCCTAAAATTGAAAGAATAGTATCTGAAATGAATGAATCTAAATTCCTTGGATTGCATTCTAC-AGGCACCAACCCTGAGATCAAAATTTGGAAGGTGGCCCTGAGCACTA-----GCTGAAGGGAAGCAGGAGGTGGGACAGGAAAGAGG--TGGTGTCGTGGGGCGTCCAGGAGCCAGGTCCCAC-AAGGGCAGC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGCGTTCCTTCACCA-GCCAACGCTCCACAGGTTCAGGACGGTCAATTCCAGGCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 51788 312 - 100774 TTTAAATGTTTTACA-TATTACCAAACT-AAGTTTTTAAGATAGTCCCTAAAATTGAAAGAATAGTATCTGAAATGAATGAATCTAAATTCCTTGGATTGCATTTTAC-AGGCACCAACCCTGAGATCAAAATTTGGAAGGTGGCCCTGAGCAGTA-----GCTGAAGGGAAGCAGGAGGTGGGACAGGAAAGAGG--TGGTGTCGTGGGGCATCCAGGAGCCAGGTCCCAC-AAGGGCAAC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGCGTTCCTTCACCA-GCCAACGCTCCACAGGTTCAGGACGGTCAATTCCAGGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211018 312 + 218577 tttaaatgttttaca-tattaccaaact-aagtttttaagatagtccctaaaattgaaagaatagtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCACCAACCCTGAGATCAAAATTTGGAAGGTGGCCCTGAGCAGTA-----GCTGAAGGGAAGCAGGAGGTGGGACAGGAAAGAGG--TGGTGTCGTGGGGCGTCCAGGAGCCAGGTCCCAC-AAGGGCAGC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGCGTTCCTTCACCA-GCCAACACTCCACAGGTTCAGGACGGTCAATTCCAGGCA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 37597 312 - 74206 TTTAAATGTTTTACA-TATTACCAAACT-AAGTTTTTAAGATAGTCCCTAAAATTGAAAGAATAGTATCTGAAATGAATGAATCTAAATTCCTTGGATTGCATTCTAC-AGGCACCAACCCTGAGATCAAAATTTGGAAGGTGGCCCTGAGCAGTA-----GCTGAAGGGAAGCAGGAGGTGGGACAGGAAAGAGG--TGGTGTCGTGGGGCGTCCAGGAGCCAGGTCCCAC-AAGGGCAGC-TGGGCCCGTGCTCA-CTGTGGGAGCTGGTGCGTTCCTTCACCA-GCCAACGCTCCACAGGTTCAGGACGGTCAATTCCAGGCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 169143 312 - 204313951 TGTAAATGTTTTACT-TACTACCAAACT-AAGTTTTTAAGGTAGTCTCTAAAATTGAAAAAATGGAATCTGAAATAAATGAATCTAATGGCCTTGCATTGCATTCTACAAGGCATCAGCCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGAGAA-TGGGAGGTGAGACAGGAAAGAGG--AGGTGGCACAGGGCGTCTGGGAGCCGGGTCCCTC-ATGGGCAGC-TGGGCCCGTGCTCA-CTGTGGGTGTTGGTGCGTTCTTTCACCA-GCCCACGCTCCACAGGTTCAGGAGAGTCAATTCCGGGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 130906 305 - 16417988 tgtaaatgttttact-tatcaccaaact-aagtttttaagatagtccctaaaattgaaaaaatagaatctgaaatgaatgaatctaattgCCTTGGATTGCATTCTGCAAGGCATCAGTCCTGAGACCGCAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGAGAA-TGGGAGGTGCGGCAGGAAAGAGG--CGGC-------GGCGTCCGGGAGCCGGGTCCCTC-GTGGGCAGC-AGGGCCCGTGCTCA-CTGTGGGTGTTGGTGCATTCTTCCACCA-GCCCACGCTCCACAGGTTCAGGAGAGTCAATTCCGGGCA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233254 312 + 306014 TGTAAATGTTTTACT-TATCACCAAACT-AAGTTTTTAAGATAGTCCCTCAAATTGAAAAAATAGAATCTGAAATGAATGAATCTAATTGCCTTGGATTGTATTCTACAAGGCATCAGCCCTGAGACCAAAATGTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAA-TGGGAGGTGAGACAGGAAAGAGG--CGGCAGCACGGGGCATCCGGGAGCCGGGTTCCTC-ATGGGCAGC-GGGGCCCGTGCTCA-CTGTGGGTGTTGGTGCATTCTTTCACCA-GCCCGTGCTCCACGGGTTCAGGAGAGTCAATTCCGGGCA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 93038 290 + 211231 TGTAAATGTTTTACT-TATTACCAAACT-AAGTTTTTAAGATAGTCCCTAAAATTGAAAAAATAGAATCTGAAATGAATGCATCTAATTGCCTTGGATTGCATTCTACAAGGCATCAGCCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAG-------------------GGAAAGAGG--AGGCAGCACGGGGCGGCT----CCCGGGTCCCTC-ATGGGCAGC-TGGGCCCGTGCTCA-CTGTGGGTGTTGGTGCATTCTTTCACCA-GCCCACCCTCCACAGGTTCAGGAGAGTCAATTCCGGGCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59087 303 + 2165740 TGTATATGTTTTACA-CATTACTAATCTGAAATTTTTAAAACAATCTCTAAAATTGAAA-AATATAATCTGAAATAAATGAAGCCAATTCCCTTGGATTGAATTCTAT-GGACACTGGCCCTGACAGACTAATTTGGAAGGTGATCCTGAAAGGAA-----AT------------GGAGGTCAGACAGACAAGGGGGCAGGAACCAGGGCGTATTGGGGAGCCAGTTCCCTCTGTGGGCAGCTTGGGTTCATGCTTATCTGTGGGAGCTGGTCCTTTTCTTCACTAGGTGCACATTTCACAAGTC---AGCTGTCGATTCCAGGCC i otoGar3.GL873745 I 176 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30188831 1339 - 42124431 I a score=20124.000000 s hg38.chr3_KI270779v1_alt 60246 3 + 205312 CCC s panTro5.chr3 200047779 3 + 202621043 CCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29395 3 + 190779 CCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 31791 3 + 41186 CCC i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120805713 3 + 123690457 CCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 228526 3 + 180051392 CCC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52100 3 - 100774 CCC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211330 3 + 218577 CCC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 37909 3 - 74206 CCC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 169455 3 - 204313951 CAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131211 3 - 16417988 CAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233566 3 + 306014 CAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 93328 3 + 211231 CTC i aotNan1.NW_018494784v1 C 0 I 11 s otoGar3.GL873745 59390 3 + 2165740 CTC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30190170 3 - 42124431 CTC i canFam3.chr34 I 1339 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I a score=21950.000000 s hg38.chr3_KI270779v1_alt 60249 9 + 205312 CTGGC-CTGC s panTro5.chr3 200047782 9 + 202621043 CTGGC-CTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29398 9 + 190779 CTGGC-CTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 31794 9 + 41186 CTGGC-CTGC i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120805716 9 + 123690457 CCGGC-CTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 228529 9 + 180051392 CCAGC-CTAC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52103 9 - 100774 CCAGC-CTAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211333 9 + 218577 CCAGC-CTAC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 37912 9 - 74206 CCAGC-CTAC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 169458 1 - 204313951 T--------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131214 9 - 16417988 TCGGC-CCAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233569 9 + 306014 TCAGC-CACT i cebCap1.NW_016108150v1 C 0 C 0 s otoGar3.GL873745 59393 9 + 2165740 TCAGC-CTGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30190173 10 - 42124431 CTGGCTCTAC i canFam3.chr34 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93331 11 + 211231 I a score=434351.000000 s hg38.chr3_KI270779v1_alt 60258 77 + 205312 TCCAGGACATGCTGCTGCCACCAGAGAAAGCCCCTAGGCAGCGTCCCGGGTGCTGGTGGTGTCAGAATCGAGTTTGA s panTro5.chr3 200047791 77 + 202621043 TCCAGGACGTGCTTCTGCCACCAGGGAAAGCCCCTAGGCAGCGTCCCGGGTGCTGATGGTGTCAGAATCGAGTTTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29407 77 + 190779 TCCAGGACATGCTCCTGCCACCAGAGAAAGCCCCTAGGCAGCGTCCCGGGTGCTGGTGGTGTCAGAATCGAGTTTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 31803 77 + 41186 TCCAGGACATGCTCCTGCCACCAGAGAAAGCCCCTAGGCAGCGTCCCGGGTGCTGGTGGTGTCAGAATCGAGTTTGA i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120805725 77 + 123690457 TCCAGGACGTGCTCCTGCCACCAGAGAAAGCCCCTAGGCAGCGTCCTGGGTGCTGGTGGTGTCAGGATCGAGTTTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 228538 77 + 180051392 TCCAGGATGTACTCCTGCCACCAGAGAAAGCTCCTAGGCAGCGTCCCGGGTGCTTGTGGTGTCAGAATCCAGTTGGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52112 77 - 100774 TCCAGGATGTACTCCTGCCACCAGAGAAGGCTCCTAGGCAGCGTCCCGGGTGCTTGTGGTGTCAGAATCCAGTTGGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211342 74 + 218577 TCCAGGACGTACTCCTGCCACCAGAGAAAG---CTAGGCGGCGTCCCAGGTGCTTGTGGTGTCAGAATCCAGTTGGA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 37921 74 - 74206 TCCAGGACGTACTCCTGCCACCAGAGAAAG---CTAGGCGGCGTCCCAGGTGCTTGTGGTGTCAGAATCCAGTTGGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 169459 62 - 204313951 -------------CCTGCCAGCAGAGAAAG-CCCTAGGTAGCATCCCGGGTGCT-GTGGCGTCAGAATCCAGTTTGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131223 64 - 16417988 ------------GCCATCCAGCAGAGAAGGCCCCTAGGGAAGGTCCTGGGTGCC-GTGGTGTCGGAATCCAGTTTGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233578 60 + 306014 -------------CCATCCCGCAGAGAAAGCCCCTAGGTAGCGTCCCGGGCGCT-GTGGCGTCAGAATCCAGTT--- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 93342 76 + 211231 TCCAGGACATGCTCCTGCCAGCAGAGAAAGCCCCTAGGTAGCGTCCCGGGTGCT-GTGGCGTCAGAATCCAGTTTGA i aotNan1.NW_018494784v1 I 11 C 0 s otoGar3.GL873745 59402 75 + 2165740 TCCAAGGCACACTGCTACCACCAGAGAAGCCCCCTAGGCA--GTCTCAGATGCTTCTTGTATTAGAAACCAGTATGa i otoGar3.GL873745 C 0 I 263 s canFam3.chr34 30190183 65 - 42124431 -------TCTACCACTACCACCAGAGAGAGACCCTGAGCAGAATCACAGGTGCTTGGGGCAAGAAGGTACAG----- i canFam3.chr34 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I a score=1718138.000000 s hg38.chr3_KI270779v1_alt 60335 283 + 205312 GTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACGGGGTTCTGCagcccaactgcacatcaggctggtgacagtcac----gcagcctattacttcatgtgtcatcagaggatcgctagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg---aatcctaaatttcaatcaatcatctcc--gttactcgtcttataggtattaatcctttgaaattatgtggggtgggagttaaagcaaataactaattat s panTro5.chr3 200047868 283 + 202621043 GTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACAGGGTTCTGCagcccaactgcacatcaggctggtgacagtcac----gcagcctattacttcatgtgtcgtcagagcatcgctagaacacagcacttc-aagtgtgcagatttagtgagtcatagtctaaagacaaatagagccactg---aatcctaaatttcaatcaatcatctcc--cttactcgtcttattggtattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29484 281 + 190779 GTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACAGGGTTCTGCagcccaactgcacatcaggctggtgacagtcac----gcagcctattacctcatgtgtcatc--aggatcgctagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg---aatcctaaatttcaatcaatcatctcc--gttacttgtcttattggtattaatcctttgaaattacgtggggtgggagttaaagctaataactaattat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 31880 283 + 41186 GTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACGGGTTTCTGCagcccaagtgcacatcaggctggtgacagtcac----gcagcctattacttcatgtgtcgtcagaggatcgctagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg---aatcctaaatttcaatcaatcatctcc--gttactcgtcttattggtattaatcctttgaaattatatggggtgggagttaaagctaataactaattat i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120805802 281 + 123690457 GTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCATGGGGTTCTGCAGCCCAGCTGCACATCAGGCTGGTGACAGTCAC----GCCACCTAT----TCATGTGTCATCAGAGCATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccacta---aatcctaaatttcaatcaatcatctccttgttacttgtcttattggaattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 228615 276 + 180051392 ATCTGATGAGTGACCGGGGGCTGGCTGGGCTAGGCAGCATCATGGGTTTCCGCAGCCCAAGTGCACATCAGGCTGGTGACAGTCAC----ACAGCCTAT----TCGTGTGTCGTCAGAACATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaatcatt-----gttacttgtcttattggtattaat-ctttgaaattatgtggggtgggagttaaagctaataactaattat i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52189 277 - 100774 ATCTGATGAGTGACCGGGGGCTGGCTGGGCTAGGCAGCATCATGGGTTTCTGCAGCCCAAGTGCACATCAGGCTGGTGACAGTCAC----ACAGCCTAT----TCGTGTGTCGTCAGAACATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaatcatt-----gttacttgtcttattggtattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211416 277 + 218577 ATCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACGGGTTTCTGCAGCCCAAGTGCACATCAGGCTGGTGACGGTCAC----ACAGCCTAT----TCATGTGTCGTCAGAACATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaatcatt-----gttacttgtcttactggtattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 37995 277 - 74206 ATCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACGGGTTTCTGCAGCCCAAGTGCACATCAGGCTGGTGACGGTCAC----ACAGCCTAT----TCATGTGTCGTCAGAACATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaatcatt-----gttacttgtcttattggtattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 169521 247 - 204313951 GTCTGAGGAGTGCCCTGGCACTGGCTGGGCCGGGCAGCACCACGGGTTTCTGCAGCCCAGCTGCACAGGAGGCTGCTGACAGTCAC----GCAGCCTGTGATTTC---------------ATCTC-AGGACACAGCACTTC-AAGTGTGCAAATTCAGT-----------------------GAGCCACTG--AAATCCTAAATTTGAATCCATCATCTCACTGTTACTTGTCTTATTGGTATTAACCCTTTGAACTTACGTGTGGTGGGAGTTGACGCTAATAACTAATTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131287 281 - 16417988 GTCTGAGGAGTGCCCTGGCGCTGGCTGGGCCAGGCAGCATCATGGGTTTCTGCGGCCCAGTTGCACGTCAGGCTGGTGATGGCCAC----GCAGCCTGTGATTCC-TGCGTCGTCAG---ACctctagaacaccgcacttc-aagtgtgcaaagtcagtgagccatagtcaaaagacaaatagagccactg--acatcccaaattc-aatcaatcatctcattgttacttgtcttattggtattaaccctttgaacttacgtgtggtgggagttgaagctaataactaattgt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233638 283 + 306014 ---TGAGGAGTGCCCTGGCGCTGGCTGGGCCAGGCAGCATCATGGGTTTCTGCAGCCCAGCTGCATATCAGGCCAGTGATAGTCAC----GCAGCCTGTGATTCCATGCGTCGTCAGACCACctctagaacacagcacttc-aagtgtgcaaattcagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaatcatctcattgttacttgtcttattggtattaaccctttgaacttacgtgtgttgggagttgaagctaataactaattat i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 93418 286 + 211231 GTCCGAGGAGTGCCCTGGCGCTGGCTGGGCTAGGCAGCATCGTGGGTTTCTGCGGCCCAGCTGCACATCAGGCTGGGGATAGTCAC----ACAGCCTGTGAGTCCATGCATCGTCAGACCATctctagaacacagcacttc-aagtgtgcaaattcagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaatcatcgcattattacttgtcttattggtattaaccctttgaactcatgtgtggtgggagttgaagctaatatctaattat i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30190248 269 - 42124431 GTCTGGTGAGTG-CTGGGGGAGTTCCAGACCATGCAGCATC--GAGTGTCTGCaacccagctgcagatcaaa-tggtgactgtcacaagaggagagtgtcatttcaagtggcat-----------tagaacatagaacttctgagtttacagtttcagtaaac-----tttaaggataaatgaaaccactaagaaagcctatgtttc-atcagcagtcttactgttactagggatattggtgttcatactttgaaatt--gtgtagtgtaagttaaagctagtaa-taagtat i canFam3.chr34 C 0 I 59 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I a score=94018.000000 s hg38.chr3_KI270779v1_alt 60618 14 + 205312 gttaatgctaaaac s panTro5.chr3 200048151 14 + 202621043 gttaatgctaaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29765 14 + 190779 gttaatgctaaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32163 14 + 41186 gttcatgctaaaac i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806083 14 + 123690457 gttaatgctaaaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 228891 14 + 180051392 gttaatgCTAAAAC i rheMac8.chr6 C 0 I 36 s macNem1.NW_012013899v1 52466 14 - 100774 gttaatgCTAAAAC i macNem1.NW_012013899v1 C 0 I 36 s cerAty1.NW_012004452v1 211693 14 + 218577 gttaatgCTAAAAC i cerAty1.NW_012004452v1 C 0 I 36 s manLeu1.NW_012101728v1 38272 14 - 74206 gttaatgCTAAAAC i manLeu1.NW_012101728v1 C 0 I 36 s calJac3.chr2 169768 14 - 204313951 GTTAATGCTAAAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131568 14 - 16417988 gttaatgttaaaac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233921 14 + 306014 gttaatgCTAAAAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 93704 14 + 211231 gttaatgctaaaac i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190517 59 - 42124431 I a score=50935.000000 s hg38.chr3_KI270779v1_alt 60632 18 + 205312 taagatttttctggcaag s panTro5.chr3 200048165 18 + 202621043 gaagatatttctggccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29779 18 + 190779 taagatttttctggccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32177 18 + 41186 taagatttttctggccag i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806097 18 + 123690457 taagatttttctggccag i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 169782 18 - 204313951 TAAGATTTTTCTggccag i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131582 18 - 16417988 taagattttTCTggccag i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233935 14 + 306014 ----ATTTTTCTggccag i cebCap1.NW_016108150v1 C 0 I 19 s aotNan1.NW_018494784v1 93718 18 + 211231 taatattttTCTggccag i aotNan1.NW_018494784v1 C 0 I 19 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190517 59 - 42124431 I e macNem1.NW_012013899v1 52480 36 - 100774 I e manLeu1.NW_012101728v1 38286 36 - 74206 I e cerAty1.NW_012004452v1 211707 36 + 218577 I e rheMac8.chr6 228905 36 + 180051392 I a score=4136.000000 s hg38.chr3_KI270779v1_alt 60650 7 + 205312 ggaaaat s panTro5.chr3 200048183 7 + 202621043 gtatggt i panTro5.chr3 C 0 I 13 s panPan2.chrUn_NW_014024201v1 29797 7 + 190779 gtgcagt i panPan2.chrUn_NW_014024201v1 C 0 I 13 s gorGor5.CYUI01002752v1 32195 7 + 41186 ttatggt i gorGor5.CYUI01002752v1 C 0 I 1 s nomLeu3.chr11 120806115 7 + 123690457 gtgcggt i nomLeu3.chr11 C 0 I 1 s calJac3.chr2 169800 7 - 204313951 gagtggt i calJac3.chr2 C 0 I 6 s saiBol1.JH378155 131600 7 - 16417988 gagtggt i saiBol1.JH378155 C 0 I 6 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190517 59 - 42124431 I e aotNan1.NW_018494784v1 93736 19 + 211231 I e cebCap1.NW_016108150v1 233949 19 + 306014 I e macNem1.NW_012013899v1 52480 36 - 100774 I e manLeu1.NW_012101728v1 38286 36 - 74206 I e cerAty1.NW_012004452v1 211707 36 + 218577 I e rheMac8.chr6 228905 36 + 180051392 I a score=-1410.000000 s hg38.chr3_KI270779v1_alt 60657 6 + 205312 -cctccc s gorGor5.CYUI01002752v1 32203 6 + 41186 -gctcac i gorGor5.CYUI01002752v1 I 1 C 0 s nomLeu3.chr11 120806123 6 + 123690457 -gctcac i nomLeu3.chr11 I 1 C 0 s calJac3.chr2 169813 6 - 204313951 tgcctg- i calJac3.chr2 I 6 C 0 s saiBol1.JH378155 131613 6 - 16417988 cgcctg- i saiBol1.JH378155 I 6 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190517 59 - 42124431 I e aotNan1.NW_018494784v1 93736 19 + 211231 I e cebCap1.NW_016108150v1 233949 19 + 306014 I e panPan2.chrUn_NW_014024201v1 29804 13 + 190779 I e macNem1.NW_012013899v1 52480 36 - 100774 I e manLeu1.NW_012101728v1 38286 36 - 74206 I e cerAty1.NW_012004452v1 211707 36 + 218577 I e rheMac8.chr6 228905 36 + 180051392 I e panTro5.chr3 200048190 13 + 202621043 I a score=-4701.000000 s hg38.chr3_KI270779v1_alt 60663 1 + 205312 -a s gorGor5.CYUI01002752v1 32209 1 + 41186 -a i gorGor5.CYUI01002752v1 C 0 I 5 s nomLeu3.chr11 120806129 1 + 123690457 -a i nomLeu3.chr11 C 0 I 5 s calJac3.chr2 169819 1 - 204313951 t- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131619 1 - 16417988 t- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233968 1 + 306014 t- i cebCap1.NW_016108150v1 I 19 C 0 s aotNan1.NW_018494784v1 93755 1 + 211231 t- i aotNan1.NW_018494784v1 I 19 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190517 59 - 42124431 I e panPan2.chrUn_NW_014024201v1 29804 13 + 190779 I e macNem1.NW_012013899v1 52480 36 - 100774 I e manLeu1.NW_012101728v1 38286 36 - 74206 I e cerAty1.NW_012004452v1 211707 36 + 218577 I e rheMac8.chr6 228905 36 + 180051392 I e panTro5.chr3 200048190 13 + 202621043 I a score=541527.000000 s hg38.chr3_KI270779v1_alt 60664 92 + 205312 agtcccagcac-tttgggaggccgaggtgggcagatgacctgaggtcaggagtttgagaccagcctggccaacatggtgaaa-cgccatctcta s panTro5.chr3 200048203 92 + 202621043 aatcccagcac-tttgggaggccgaggcgggcagatgacctgacgtcaggagtttgagaccagcctggccaacatggtgaaa-ccccatctcta i panTro5.chr3 I 13 C 0 s panPan2.chrUn_NW_014024201v1 29817 91 + 190779 aatccca-cac-tttgggaggccgaggcgggcagatgacctgaggtcaggagtttgagaccagcctggccaacatagtgaaa-ccccatctcta i panPan2.chrUn_NW_014024201v1 I 13 C 0 s gorGor5.CYUI01002752v1 32215 92 + 41186 aatcccagcac-tttgggaggccgaggcagacagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaa-ccccatctcta i gorGor5.CYUI01002752v1 I 5 C 0 s nomLeu3.chr11 120806135 92 + 123690457 aatcccagcac-tttgggaggccgaggtgggcagatcacctgaggccaggagttcgagaccagcctggccagcatggtgaaa-ccctatctcta i nomLeu3.chr11 I 5 C 0 s rheMac8.chr6 228941 92 + 180051392 aatcccggcac-tttgggaggccgaggcgggcagatcacctgaggccaggagttcaagaccagcgtagccaacatggtgaaa-ccgcatctcta i rheMac8.chr6 I 36 C 0 s macNem1.NW_012013899v1 52516 92 - 100774 aatcccggcac-tttgggaggccgaggcgggcagatcacctgaggccaggagttcaagaccagcgtagccaacatggtgaaa-ccgcatctcta i macNem1.NW_012013899v1 I 36 C 0 s cerAty1.NW_012004452v1 211743 92 + 218577 aatcccagcac-tttgggaggccgaggcgggcagatcacctgaggccaggagttcaagaccagcgtagccaacatggtgaaa-ccgcatctcta i cerAty1.NW_012004452v1 I 36 C 0 s manLeu1.NW_012101728v1 38322 92 - 74206 aatcccagcac-tttgggaggccgaggcgggcagatcacctgaggccaggagttcaagaccagcgtagccaacatggtgaaa-ccgcatctcta i manLeu1.NW_012101728v1 I 36 C 0 s calJac3.chr2 169820 94 - 204313951 aatcccagcacttttgggaggctgaggcgggcaggtcacctgaggtcagcagtttgagaccgccgtggccaacatggtgaaacccctgtctcta i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131620 91 - 16417988 aatcccagcac-tttgggaggctgaggcgggcaggccacctgaagtcggcagtttgagactgccgtggccaatatggggaaa--cctgtctcta i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 233969 93 + 306014 aatcccagcac-tttgggaggctgaggcgggcaggctacctgaggtcagcagttggagaccaccatggccaacatggtgaaacccctgtctcta i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 93756 93 + 211231 aatcccagcac-tttgggaggctgaggcgggcaggtcacctgagttcagcagtttgagaccgctgtggccaacatggtgaaacccctgtctcta i aotNan1.NW_018494784v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190517 59 - 42124431 I a score=44044.000000 s hg38.chr3_KI270779v1_alt 60756 6 + 205312 ctaaaa s panTro5.chr3 200048295 6 + 202621043 ctaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29908 6 + 190779 ctaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32307 6 + 41186 ctaaaa i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806227 6 + 123690457 ctaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 229033 6 + 180051392 ctaaaa i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52608 6 - 100774 ctaaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211835 6 + 218577 ctaaaa i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38414 6 - 74206 ctaaaa i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 169914 6 - 204313951 ctaaaa i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 131711 6 - 16417988 ctaaag i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 234062 6 + 306014 ctaaaa i cebCap1.NW_016108150v1 C 0 I 746 s aotNan1.NW_018494784v1 93849 6 + 211231 ctaaaa i aotNan1.NW_018494784v1 C 0 I 740 s canFam3.chr34 30190576 6 - 42124431 ttgaga i canFam3.chr34 I 59 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I a score=123008.000000 s hg38.chr3_KI270779v1_alt 60762 34 + 205312 ttgaaaaatta-gctgggcatggtggcaggtgcct s panTro5.chr3 200048301 34 + 202621043 ttgaaaaatta-gctgggcatggtggcaggtgcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29914 34 + 190779 ttgaaaaatta-gctgggcatggtggcaggtgcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32313 34 + 41186 ttgaaaaatta-gctgggcatggtggcaggtgcct i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806233 34 + 123690457 ttccaaaatta-gctgggcatggtggtaggtgcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 229039 34 + 180051392 ttcaaaaatta-gctgggcatggtggcaggtgcct i rheMac8.chr6 C 0 I 3 s macNem1.NW_012013899v1 52614 34 - 100774 ttcaaaaatta-gctgggcatggtggcaggtgcct i macNem1.NW_012013899v1 C 0 I 3 s cerAty1.NW_012004452v1 211841 34 + 218577 ttcaaaaatta-gctgggcatggtggcaggtgcct i cerAty1.NW_012004452v1 C 0 I 3 s manLeu1.NW_012101728v1 38420 34 - 74206 ttcaaaaagta-gctgggcatggtggcaggtgcct i manLeu1.NW_012101728v1 C 0 I 3 s calJac3.chr2 169921 35 - 204313951 tacaaaaattaggccaggcgcagtggctcacacct i calJac3.chr2 I 1 C 0 s saiBol1.JH378155 131718 35 - 16417988 tacaaaaattaggccaggcgcagtggctcacacct i saiBol1.JH378155 I 1 C 0 s canFam3.chr34 30190582 15 - 42124431 ttgagaaatca--ctag------------------ i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I a score=55516.000000 s hg38.chr3_KI270779v1_alt 60796 17 + 205312 gtaatcccagctattgg s panTro5.chr3 200048335 17 + 202621043 gtaatcccagctgttgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29948 17 + 190779 gtaatcccagctgttgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32347 17 + 41186 gtaatcccagctattgg i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806267 17 + 123690457 gtaatcccagctgtttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 229076 17 + 180051392 gtaatcccagctatttg i rheMac8.chr6 I 3 C 0 s macNem1.NW_012013899v1 52651 17 - 100774 gtaatcccagctatttg i macNem1.NW_012013899v1 I 3 C 0 s cerAty1.NW_012004452v1 211878 17 + 218577 gtaatcccagctatttg i cerAty1.NW_012004452v1 I 3 C 0 s calJac3.chr2 169956 17 - 204313951 gtaatcccagcacattg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131753 17 - 16417988 gtaatcccagcactttg i saiBol1.JH378155 C 0 C 0 s canFam3.chr34 30190597 4 - 42124431 -------------ttgg i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e manLeu1.NW_012101728v1 38454 3 - 74206 I a score=47221.000000 s hg38.chr3_KI270779v1_alt 60813 21 + 205312 ggaggctgaagcaggagaatc s panTro5.chr3 200048352 21 + 202621043 ggaggctgaagcaggagaatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29965 21 + 190779 ggaggctgaagcaggagagtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32364 21 + 41186 ggaggctgaagcaggagagtc i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806284 21 + 123690457 ggaggctgaggcaggagaatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr6 229093 21 + 180051392 ggaggttgaggcaggagaatc i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52668 21 - 100774 ggaggttgaggtaggagaatc i macNem1.NW_012013899v1 C 0 C 0 s calJac3.chr2 169973 20 - 204313951 ggaagccaaagcagtagatc- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131770 20 - 16417988 ggaagccgaagcagtagatc- i saiBol1.JH378155 C 0 C 0 s canFam3.chr34 30190601 19 - 42124431 aggggcagagggagaggga-- i canFam3.chr34 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C a score=100755.000000 s hg38.chr3_KI270779v1_alt 60834 102 + 205312 gcttgaaacaggaggcagagattgcagtgagccgagattgtgccactgcactccagcctgggcaacaggaacaaaactctatctcaaaaaataaaacaagat s panTro5.chr3 200048373 102 + 202621043 gctttaaccaggaggcagagattgcagtgagccgagattgtgccactgcactccagcctgggcaacaggaacaaaactctatctcaaaaaataaaacaagat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 29986 102 + 190779 gcttgaactaggaggcggagattgcagtgagccgagattgtgccacagcactccagcctgggcaacaggaacaaaactctatctcaaaaaataaaacaagat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32385 102 + 41186 acttgaaccaggaggcggagattgcagtgagccgagattgtgccactgcactccagcctgggcaacaggaacaaaactgtatctcaaaaaataaaacaagat i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806305 102 + 123690457 gcttgaaccaggaggcagagattgcagtgagccgagactgtgccacggcactccagcctgggcaacaggaacaaaactctacctcaaaaaataaaaaaagat i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 169993 71 - 204313951 ------acctgaggtcaggagtt---------caaga---------------ccagcctgagcaatatgga-gaaactctgtctctactaaaaatacaaaat i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 131790 71 - 16417988 ------acctgaggtcgggagtt---------caaga---------------ccagcctgagcaatatgga-gaaactccgtctctgctaaaaatacaaaat i saiBol1.JH378155 C 0 C 0 s canFam3.chr34 30190620 79 - 42124431 -----------gaagcagactctccaccaagcagggaacccaacgcagggctcaatcccggg------------acccctatatcatgacctgagccaaggc i canFam3.chr34 C 0 I 73 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C a score=1911.000000 s hg38.chr3_KI270779v1_alt 60936 1 + 205312 t s panTro5.chr3 200048475 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30088 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32487 1 + 41186 t i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806407 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 170064 1 - 204313951 t i calJac3.chr2 C 0 I 588 s saiBol1.JH378155 131861 1 - 16417988 t i saiBol1.JH378155 C 0 I 518 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190699 73 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C a score=67651.000000 s hg38.chr3_KI270779v1_alt 60937 79 + 205312 tttctgagaaaaaggtgtaaaaccgtatactaaatttgaaatagaaatataagcgtgaactcatttgttgttcttttac s panTro5.chr3 200048476 79 + 202621043 tttctttgaaaaaggtgtaaaaccatatactaaatttgaaatacaaatataagcgtgaactcatttgttgttcttttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30089 79 + 190779 tttctttgaaaaaggtgtaaaaccatatactaaatttgaaatagaaatataagcgtgaactcatttgttgttcttttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32488 79 + 41186 tttctgagaaaaaggtgtaaaaccatatactaaatttgaaatagaaatataagcgtgaacccatttgttgttcttttac i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806408 79 + 123690457 tttctgagaaaaaggtgtaaaaccatatactaaatttgaaatagaaatataagcgtgaactcatttgttgttcttttca i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30190699 73 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C a score=267912.000000 s hg38.chr3_KI270779v1_alt 61016 255 + 205312 cgtagacacattttctacctctgccccagtagcagtagacacatcaagcacctagaaagtgg-------------------tctct-------------------aatacatgaaaaccatga--------attcatagtggtggtttcaa-----agccaa----aaccaaacaaacacatgtaattggtcactcttggaggtacctagggcactaactcctaacactgggaatggacacttgaaggaagat----cagtaattatcctgtcttttctctacaaattgcaattcagggaaaccttgttgatta s panTro5.chr3 200048555 259 + 202621043 cgtatacacattttctacctctgcccCAGTAGCAGTAGACACATCAAGCACCTAGAAAGTGG-------------------TCTGT-------------------AATACATGAAAACCGTGA--------ATTGATAGTGATGGTTCCAA-----AGCCGAAACCAACCAACCAAACACATGTAattggtcactcttggaggtacccagggcactaactcctaacactgggaatggacacttgaaggaagat----cagcaattatcctgtcttttctctacaaactgcaattcagggaaaccttgttgatta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30168 259 + 190779 cgtatacacattttctacctctgccccagtagcagtagacacatcaagcacctagaaagtgg-------------------tctct-------------------aaTACATGAAAACCGTGA--------ATTCATAGTGATGGTTTCAA-----AGCCGAAACCAACCAaacaaaaacatgtaattggtcactcttggaggtacccagggcactaactcctaacactgggaatggacacttgaaggaagat----cagcaattatcctttcttttctctacaaattgcaactcagggaaaccttgttgatta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32567 259 + 41186 catagacacattttctacctctgcccCAGTAGCAGTAGACACATCAAGCACCTAGAAAGTGG-------------------TCTGT-------------------AATACATGAAAACCGTGA--------ATTGATAGTGATGGTTTCAA-----AGCCGAAACCAACCAACCAAACACATGTAattggtcactcttggaggtatctagggcactaactcctaacactgggaatggacacttgaaggaagat----cagcaattatcttgtcttttctctacaaattgcaattcagggaaaccttgttgatta i gorGor5.CYUI01002752v1 C 0 C 0 s nomLeu3.chr11 120806487 259 + 123690457 cgtagacacatttcctagctctgccccagtagcagtagacacatcaagcacctagaaagtgg-------------------tctct-------------------aaTATATGAAAACCATGA--------ATTCATAGTGATGGTTTCAA-----AGCCAAAACCAGCCAAACAAACACATGTAattggtcactcttggaggtacctagggcactaactcctaacactgggaatggatacttgaaggaagat----cagtgattatcctgccttttctctacaaattgcaattcagggaaaccttgttgatTA i nomLeu3.chr11 C 0 I 10 s canFam3.chr34 30190772 298 - 42124431 cacacacacacTGCCCCTCTCTGCCCCAGTAGCAGTGGGCTC--TAAGCACCCTGATTGTGGGGTCTGCTTACCACTGCCCTCTCTCCCCCATAGCCACAGATTGACTATattaaaaacattagtatgttcatttataatgatagtttaaaaactcagccaacactgagcaaacaa--------------tcacttttggaagtaactagggcactaactactaatactgaaaatggacaattagaggaaaatagtgaaatggttatcctgcctttaatccacaaattgccattcaggataacctagttgatta i canFam3.chr34 I 73 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C a score=35882.000000 s hg38.chr3_KI270779v1_alt 61271 53 + 205312 gggaaagttctttac--ataagaattcctgcaagtaagtgagtaaagaatgacag s panTro5.chr3 200048814 53 + 202621043 gggaaagttctttac--ataagaattcctgcaaataagtgagtaaagaatgacag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30427 53 + 190779 gggaaagttctttac--ataagaattcctgcaaataagtgagtaaagaatgacag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32826 53 + 41186 gggaaagttctttac--ataagaattcctgcaaataagtgagtaaagaatgacag i gorGor5.CYUI01002752v1 C 0 C 0 s canFam3.chr34 30191070 51 - 42124431 ggaaaagtattttatggataataa----aatagataaaggagtaaggaatgatag i canFam3.chr34 C 0 I 90 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=47775.000000 s hg38.chr3_KI270779v1_alt 61324 86 + 205312 TTTAAGAATTGTCccagcctggccaacatagtgaaaccccatctctaaaaatacaaaaaattagccaggcatgatgatgggtgcct s panTro5.chr3 200048867 86 + 202621043 TTTAAGAATTGTCccagcctggccaacatagtgaaaccccatctctaaaaatacaaaaaattagccaggcatgatggtgggtgcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30480 86 + 190779 TTTAAGAATTGTCccagcctggccaacatagtgaaaccccatctctaaaaatacaaaaaattagctaggcatgatggtgggtgcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32879 86 + 41186 TTTAAGAATTGTCccagcctggccaacatagtgaaaccccatctctaaaaatacaaaaaattaaccaggcatgatggtgggtgcct i gorGor5.CYUI01002752v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e manLeu1.NW_012101728v1 38454 3 - 74206 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=14654.000000 s hg38.chr3_KI270779v1_alt 61410 17 + 205312 gtaatcccagctactca s panTro5.chr3 200048953 17 + 202621043 gtaatcccagctactca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30566 17 + 190779 gtaatcccagctactca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32965 17 + 41186 gtaatcccagctactca i gorGor5.CYUI01002752v1 C 0 C 0 s manLeu1.NW_012101728v1 38457 17 - 74206 gtaatcccagctatttg i manLeu1.NW_012101728v1 I 3 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e cerAty1.NW_012004452v1 211895 0 + 218577 C e rheMac8.chr6 229114 0 + 180051392 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=27651.000000 s hg38.chr3_KI270779v1_alt 61427 21 + 205312 ggaggctgaggcaggagagtt s panTro5.chr3 200048970 21 + 202621043 ggaggctgaagcaggagagtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 30583 21 + 190779 ggaggctgaggcaggagagtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01002752v1 32982 21 + 41186 ggaggctgaggcaggagagtt i gorGor5.CYUI01002752v1 C 0 C 0 s cerAty1.NW_012004452v1 211895 21 + 218577 ggaggttgaggcaggagaatt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38474 21 - 74206 ggaggttgaggcaggagaatt i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e macNem1.NW_012013899v1 52689 0 - 100774 C e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e rheMac8.chr6 229114 0 + 180051392 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=111659.000000 s hg38.chr3_KI270779v1_alt 61448 46 + 205312 gcttgaacctgggagacggaggttgcagtgagccgagagtgcgcca s panTro5.chr3 200048991 46 + 202621043 gtttgaacctgggagacggaggttgcagtgagccaagagtgcgcca i panTro5.chr3 C 0 I 12 s panPan2.chrUn_NW_014024201v1 30604 46 + 190779 gcttgaacctgggagacggaggttgcagtgagccgagagtgtgcca i panPan2.chrUn_NW_014024201v1 C 0 I 12 s gorGor5.CYUI01002752v1 33003 46 + 41186 gcttgaacctgggagatggaggttgcagtgagccgagagtgcgcca i gorGor5.CYUI01002752v1 C 0 C 0 s rheMac8.chr6 229114 46 + 180051392 acttgaacccgggaggcggaggttgcagtgagccgagagtgagcca i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52689 46 - 100774 acttgaacccgggaggcagaggttgcagtgagccgagagtgagcca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211916 46 + 218577 gcttgaacccgggaggcggaggttgcagtgagccgagagtgagcca i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38495 46 - 74206 gcttgaacctgggaggcggaggttgcagtgagccgagagtgagcca i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=62753.000000 s hg38.chr3_KI270779v1_alt 61494 52 + 205312 ctgcactccagcctgggcaacaagagtgagactctgtctc----aaaaaaaaaaaa s gorGor5.CYUI01002752v1 33049 53 + 41186 ctgcactccagcctgggcaacaagagtgagactctgtctc---aaaaaaaaaaaaa i gorGor5.CYUI01002752v1 C 0 C 0 s rheMac8.chr6 229160 55 + 180051392 ttgcactccagtctgggcaacaagagcaagactctgtctc-aaaaaaaaaaaaaaa i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52735 51 - 100774 ttgcactccagtctgggcaacaagagcaagactctgtctc-----aaaaaaaaaaa i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 211962 51 + 218577 ttgcactccagtctgggcaacaagagcaagactctgtctc-----aaaaaaaaaaa i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38541 56 - 74206 ttgcactccagtctgggcaacaagagcaagactctgtctcaaaaaaaaaaaaaaaa i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 131862 518 - 16417988 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=89727.000000 s hg38.chr3_KI270779v1_alt 61546 60 + 205312 aaagaaTTGTCAAATTGCTACCCCTAATGCCATGGTTCTCTAACCTGTGTAACAGGATCA s gorGor5.CYUI01002752v1 33102 60 + 41186 aaagaaTTGTCAAATTGCCACCCCTAATGCCgtggttctctaacctgtgtaacaggatca i gorGor5.CYUI01002752v1 C 0 C 0 s rheMac8.chr6 229215 60 + 180051392 aaagaaTTGTCAAATTACCACCCCTAATGCCCTGGTTCTCTAACCTGTGTAAGAGGATCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52786 59 - 100774 aaagaaTTGTCAAATTACCA-CCCTAATGCCCtggttctctaacctgtgtaagaggatca i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212013 56 + 218577 aaaG----GTCAAATTACCACCCCTAATGCCCTGGTTCTCTAACCTGTGTAAGAGGATCA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38597 56 - 74206 aaaG----GTCAAATTACCACCCCTAATGCCCTGGTTCTCTAACCTGTGTAAGAGGATCA i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 132380 60 - 16417988 agaaaactgtcagattgcaacctctaatgCCATGGTTCTGCAAGGTGTGTAACAGGATCA i saiBol1.JH378155 I 518 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=6399.000000 s hg38.chr3_KI270779v1_alt 61606 6 + 205312 GCTGGA s gorGor5.CYUI01002752v1 33162 6 + 41186 cctgga i gorGor5.CYUI01002752v1 C 0 N 0 s rheMac8.chr6 229275 6 + 180051392 CCTAGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52845 6 - 100774 cctaga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212069 6 + 218577 CCTAGA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38653 6 - 74206 CCTGGA i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=34089.000000 s hg38.chr3_KI270779v1_alt 61612 29 + 205312 GGGACGCTACCCCAGACCTTCCAATTCAG s gorGor5.CYUI01000576v1 58434 29 + 106623 GGGACGCTACCCCAGATCTTTTGATTCAG i gorGor5.CYUI01000576v1 N 0 C 0 s rheMac8.chr6 229281 29 + 180051392 GGGACCCCACCCCAGACCTTCCGATTCAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52851 29 - 100774 gggaccccaccccagaccttccaattcag i macNem1.NW_012013899v1 C 0 I 16 s cerAty1.NW_012004452v1 212075 29 + 218577 GGGACCCCACCCCAGACCTTCTGATTCCG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38659 29 - 74206 GGGACCCCACCCCAGACCTTCTGATTCCG i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=8666.000000 s hg38.chr3_KI270779v1_alt 61641 18 + 205312 TCCTGGGGGGACCCTAGT s gorGor5.CYUI01000576v1 58463 17 + 106623 TCCTTGGGG-ACGCTACC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229310 18 + 180051392 TCCTGGGGGGACCCCACC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 212104 18 + 218577 TCCTCAGGCGACCCCACC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38688 18 - 74206 TCCTCAGGCGACCCCACC i manLeu1.NW_012101728v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 52880 16 - 100774 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=91917.000000 s hg38.chr3_KI270779v1_alt 61659 78 + 205312 CCAGACCTTCCGATTCGGTCCTGGGGGGGCCCTAGTCCAGACCTTCCAATTCAGTCCTGGGGGGACCCCACCCCAGAC s gorGor5.CYUI01000576v1 58480 77 + 106623 CCCGATCTTTCGATTCAGTCCTGGGGGA-CCCTACCCCAGATCTTCCGATTCAGTCCTGGGGGGACCCTACCCCAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229328 78 + 180051392 CCAGACCTTCCGATTCAGTCCTGGGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTGGGGGGACCCCACCCCAGAC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52896 77 - 100774 ccagaccttccgattcagtcctggggggacccCACCCCAGACCTTCCGATTCAGTCCTGGGGGGA-CCCACCCCAGAC i macNem1.NW_012013899v1 I 16 C 0 s cerAty1.NW_012004452v1 212122 78 + 218577 CCAGACCTTCCAATTCAGTCCTGGGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTCGGGTGACCCCACCCCAGAC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38706 78 - 74206 CCAGACCTTCCAATTCAGTCCTCGGGTGACCCCACCCCAGACCTTCCGATTCAGTCCTCGGGTgaccccaccccagac i manLeu1.NW_012101728v1 C 0 T 114 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=5820.000000 s hg38.chr3_KI270779v1_alt 61737 6 + 205312 CTTCCG s gorGor5.CYUI01000576v1 58557 6 + 106623 CTTCCG i gorGor5.CYUI01000576v1 C 0 I 140 s rheMac8.chr6 229406 6 + 180051392 CTTCCG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52973 6 - 100774 CTTCCG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212200 6 + 218577 CTTCCG i cerAty1.NW_012004452v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e manLeu1.NW_012101728v1 38784 114 - 74206 T e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=11560.000000 s hg38.chr3_KI270779v1_alt 61743 13 + 205312 ATTCAGTCCTGGG s gorGor5.CYUI01000576v1 58703 13 + 106623 ATTCAGTCCTGGG i gorGor5.CYUI01000576v1 I 140 C 0 s rheMac8.chr6 229412 13 + 180051392 ATTCAGTCCTGGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52979 13 - 100774 ATTCAGTCCTGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212206 13 + 218577 ATTCAGTCCTCGG i cerAty1.NW_012004452v1 C 0 T 72 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e manLeu1.NW_012101728v1 38784 114 - 74206 T e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=34770.000000 s hg38.chr3_KI270779v1_alt 61756 45 + 205312 GAGACCCTACCCCAGATCTTCTGATTCAGTCCTGGGGGGACCCTC s gorGor5.CYUI01000576v1 58716 45 + 106623 GAGACCCTACCCCAGATCTTCTGATTCAGTCTTGGGGGGACCCTA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229425 45 + 180051392 GGGACCCCACCCCAGACCTTCCGATTCAGTCCTGGGGGGACCCCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 52992 44 - 100774 GGGACCCCACCCCAGACCTTCCGATTCAGTCCT-GGGGGACCCCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212147 45 + 218577 GGGACCCCACCCCAGACCTTCCGATTCAGTCCTCGGGTGACCCCA i cerAty1.NW_012004452v1 T 72 I 27 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e manLeu1.NW_012101728v1 38784 114 - 74206 T e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=-1573.000000 s hg38.chr3_KI270779v1_alt 61801 2 + 205312 GT- s gorGor5.CYUI01000576v1 58761 2 + 106623 GT- i gorGor5.CYUI01000576v1 C 0 I 35 s rheMac8.chr6 229470 2 + 180051392 -CC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53036 2 - 100774 -CC i macNem1.NW_012013899v1 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e manLeu1.NW_012101728v1 38784 114 - 74206 T e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=64528.000000 s hg38.chr3_KI270779v1_alt 61803 83 + 205312 CCAGACCTTCCGATTCAGTCCTGGGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTG-GGGTACCCCACCCCAGACCTTCCG s gorGor5.CYUI01000576v1 58798 84 + 106623 CCAGACCTTCCGGTTCAGTCCTGGAGGGACCCCACCCCAGATCTTCCGATTCAGTCCTGCGGGGATCCCACCCCAGACCTTCCG i gorGor5.CYUI01000576v1 I 35 C 0 s rheMac8.chr6 229472 84 + 180051392 CCAGACCTTCCGATTCAGTCCTGGGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTGGGGGGACCCCACCCCAGACCTTCCG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53038 80 - 100774 CCAGACCTTCCGATTCAGTCT--GGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTGGGGG--CCCCACCCCAGACCTTCCG i macNem1.NW_012013899v1 C 0 I 180 s manLeu1.NW_012101728v1 38670 84 - 74206 CCAGACCTTCTGATTCCGTCCTCAGGCGACCCCACCCCAGACCTTCCAATTCAGTCCTCGGGTGACCCCACCCCAGACCTTCCG i manLeu1.NW_012101728v1 T 114 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=360.000000 s hg38.chr3_KI270779v1_alt 61886 3 + 205312 TTT s gorGor5.CYUI01000576v1 58882 2 + 106623 -AT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229556 2 + 180051392 -AT i rheMac8.chr6 C 0 C 0 s manLeu1.NW_012101728v1 38754 2 - 74206 -AT i manLeu1.NW_012101728v1 C 0 I 28 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=1419.000000 s hg38.chr3_KI270779v1_alt 61889 5 + 205312 TCAGT s gorGor5.CYUI01000576v1 58884 5 + 106623 TCAGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229558 5 + 180051392 TCAGT i rheMac8.chr6 C 0 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e aotNan1.NW_018494784v1 93855 740 + 211231 I e cebCap1.NW_016108150v1 234068 746 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e calJac3.chr2 170065 588 - 204313951 I e saiBol1.JH378155 132440 0 - 16417988 C e manLeu1.NW_012101728v1 38756 28 - 74206 I e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=1500.000000 s hg38.chr3_KI270779v1_alt 61894 1 + 205312 C s gorGor5.CYUI01000576v1 58889 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229563 1 + 180051392 C i rheMac8.chr6 C 0 C 0 s saiBol1.JH378155 132440 1 - 16417988 C i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234814 1 + 306014 c i cebCap1.NW_016108150v1 I 746 C 0 s aotNan1.NW_018494784v1 94595 1 + 211231 c i aotNan1.NW_018494784v1 I 740 C 0 e otoGar3.GL873745 59477 263 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e calJac3.chr2 170065 588 - 204313951 I e manLeu1.NW_012101728v1 38756 28 - 74206 I e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=2100.000000 s hg38.chr3_KI270779v1_alt 61895 1 + 205312 C s gorGor5.CYUI01000576v1 58890 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229564 1 + 180051392 C i rheMac8.chr6 C 0 C 0 s saiBol1.JH378155 132441 1 - 16417988 C i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234815 1 + 306014 c i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94596 1 + 211231 c i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59740 1 + 2165740 C i otoGar3.GL873745 I 263 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e calJac3.chr2 170065 588 - 204313951 I e manLeu1.NW_012101728v1 38756 28 - 74206 I e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=6575.000000 s hg38.chr3_KI270779v1_alt 61896 4 + 205312 TGGA s gorGor5.CYUI01000576v1 58891 4 + 106623 TGGA i gorGor5.CYUI01000576v1 C 0 I 35 s rheMac8.chr6 229565 4 + 180051392 TGGG i rheMac8.chr6 C 0 C 0 s calJac3.chr2 170653 4 - 204313951 TGGA i calJac3.chr2 I 588 C 0 s saiBol1.JH378155 132442 4 - 16417988 tgca i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234816 4 + 306014 tgga i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94597 4 + 211231 tgga i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59741 4 + 2165740 TAAA i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e manLeu1.NW_012101728v1 38756 28 - 74206 I e cerAty1.NW_012004452v1 212192 27 + 218577 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=7200.000000 s hg38.chr3_KI270779v1_alt 61900 2 + 205312 Gg s gorGor5.CYUI01000576v1 58930 2 + 106623 Gg i gorGor5.CYUI01000576v1 I 35 C 0 s rheMac8.chr6 229569 2 + 180051392 GG i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 212219 2 + 218577 Gg i cerAty1.NW_012004452v1 I 27 C 0 s calJac3.chr2 170657 2 - 204313951 Gg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132446 2 - 16417988 gg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234820 2 + 306014 gg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94601 2 + 211231 gg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59745 2 + 2165740 GG i otoGar3.GL873745 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e canFam3.chr34 30191121 90 - 42124431 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e manLeu1.NW_012101728v1 38756 28 - 74206 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=30145.000000 s hg38.chr3_KI270779v1_alt 61902 8 + 205312 gaccctac s gorGor5.CYUI01000576v1 58932 8 + 106623 gaccctac i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229571 8 + 180051392 GACCCCAC i rheMac8.chr6 C 0 C 0 s cerAty1.NW_012004452v1 212221 8 + 218577 gaccccac i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 170659 8 - 204313951 gaccctac i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132448 8 - 16417988 gaccctac i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234822 8 + 306014 gaccctac i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94603 8 + 211231 gaccctat i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59747 8 + 2165740 GACCCTAC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191211 8 - 42124431 gaccccat i canFam3.chr34 I 90 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 53118 180 - 100774 I e manLeu1.NW_012101728v1 38756 28 - 74206 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=21374.000000 s hg38.chr3_KI270779v1_alt 61910 7 + 205312 cccagat s gorGor5.CYUI01000576v1 58940 7 + 106623 cccagat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229579 7 + 180051392 CCCAGAC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53298 7 - 100774 cccagat i macNem1.NW_012013899v1 I 180 C 0 s cerAty1.NW_012004452v1 212229 7 + 218577 cccagac i cerAty1.NW_012004452v1 C 0 C 0 s calJac3.chr2 170667 7 - 204313951 cccagaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132456 7 - 16417988 cccagaa i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234830 7 + 306014 cccagaa i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94611 7 + 211231 cccagaa i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59755 5 + 2165740 ACCAG-- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191219 7 - 42124431 cccagga i canFam3.chr34 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e manLeu1.NW_012101728v1 38756 28 - 74206 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=58329.000000 s hg38.chr3_KI270779v1_alt 61917 18 + 205312 cttccgattca----gtcctgg s gorGor5.CYUI01000576v1 58947 18 + 106623 attctgattca----gtcctgg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 229586 18 + 180051392 CTTCCGATTCA----GTCCTGG i rheMac8.chr6 C 0 I 576 s macNem1.NW_012013899v1 53305 18 - 100774 cttctgattca----gtcctga i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212236 18 + 218577 cttctgatgca----gtccagg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38784 18 - 74206 cttccgattca----gtcctgg i manLeu1.NW_012101728v1 I 28 C 0 s calJac3.chr2 170674 16 - 204313951 cttcc-a-tca----gtcctgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132463 17 - 16417988 cttcc-attca----gtcctgg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234837 17 + 306014 cttcc-attca----gtcctgg i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94618 17 + 211231 cttcc-attca----gtcctgg i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59760 15 + 2165740 -------TTCAGAAGGTCCTGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191226 22 - 42124431 cttctggttcagcaggtcctgg i canFam3.chr34 C 0 I 2 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=68986.000000 s hg38.chr3_KI270779v1_alt 61935 15 + 205312 ttcggtctgagaatt s gorGor5.CYUI01000576v1 58965 15 + 106623 ttcggtctgagaatt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230180 15 + 180051392 ttcggcctgagaatt i rheMac8.chr6 I 576 C 0 s macNem1.NW_012013899v1 53323 15 - 100774 ttcggcctgagaatt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212254 15 + 218577 tgcagcctgagaatt i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38802 15 - 74206 ttcagcctgagaatt i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 170690 15 - 204313951 ttaggcctgagaatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132480 15 - 16417988 ttaggcctgagaatt i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234854 15 + 306014 ttaggcctgagaatt i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94635 15 + 211231 ttaggcctgagaatt i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59775 15 + 2165740 TTGGGCCTGAGGGCC i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191250 15 - 42124431 ttggtcctgagaatc i canFam3.chr34 I 2 C 0 e mm10.chr13 46099921 2341 - 120421639 I e dasNov3.JH577625 564142 13689 + 913073 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=498732.000000 s hg38.chr3_KI270779v1_alt 61950 154 + 205312 tgcatttctaacatgtc-caggGAACACAGTTTGA-----AAACCT--CCACGGCTAACATGTAATGGGATGACATGGTCCAATAAAT--GAAGGA---------------AAAATAACAGGT------------GGCAACCTCAGGCAGCTTCATCCCAA-----CCAGTA--------AGAAAGTA--------AATCCTTTTGTAAACT s gorGor5.CYUI01000576v1 58980 154 + 106623 tgcatttctaacatgtc-caggGACCACAGTTTGA-----AAACCT--CCATGGCAGACATGTAATGGGATGACATGGTCCAATAAAT--GAAGGA---------------AAAATAACAGGT------------GGCAACCTCAGGCAGCTTCATCCCAA-----CCAGTA--------AGAAAGTA--------AATCCTTTTGTAAACT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230195 140 + 180051392 tgcatttctaacatgtc-caggGACCACAGTTTGA-----AAACCT--CC-------------AATGGCA-GACATGGTCCAATAAAT--GAAGGA---------------ATAATAACAGGT------------GGCAACCTCAGACAGCTTCATCCCAA-----CCAGTA--------AGAAAGTA--------AATCCTTTTGTAAACT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53338 140 - 100774 tgcatttctaacatgtc-caggGACCACAGTTTGA-----AAACCT--CC-------------AATGGCA-GACATGGTCCAATAAAT--GAAGGA---------------ATAATAACAGGT------------GGCAACCTCAGACAGCTTCATCCCAA-----CCAGTA--------AGAAAGTA--------AATCCTTTTGTAAACT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212269 140 + 218577 tgcatttctaacatgtc-caggGACCACAGTTTGA-----AAACCT--CC-------------AATGGCA-GACATGGTCCAATAAAT--GAAGGA---------------ATAATAACAGGT------------GGCAACCTCAGACAGCTTCATCCCAA-----CCAGTA--------AGAAAGTA--------AATCCTTTTGTAAACT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38817 140 - 74206 tgcatttctaacatgtc-caggGACCACAGTTTGA-----AAACCT--CC-------------AATGGCA-GACATGGTCCAATAAAT--GAAGGA---------------ATAATAACAGGT------------GGCAACCTCAGACAGCTTCATCCCAA-----CCAGTA--------AGAAAGTA--------AATCCTTTTGTAAACT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 170705 172 - 204313951 ggcatttctaacatgcc-caggGACCACAGTTTGG-----AAACCT--CTGTGGCAGACATGTAATGGGATGACACGGTCCGATAAAC--GGGGGA---------------ACAACAACAGGTGGAGA-CCCCCTGGCAACCTCAGGAAGCTTCATCCCAG-----CCAGTA--------AGAAAGTAA-ATCCCCAAGCCTTCTGAAAACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132495 168 - 16417988 ggcatttctaacatgcc-caggGACCACAGTTTGA-----AAATCT--CCATGGCAGACATGTAAGAGGATAACACGGTCCAATAAAC--GAAGG------------------AAAAACAGGTGGAGA--CTCCTGGCAACCTCAGGCAGCTTCATCCCAG-----CCAGTA--------AGAAAGTAA-ATCCCCAAGCCTTCTGTAAACT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 234869 171 + 306014 ggcatttcgaacatgcc-caggCACCACAGTTTGA-----AAACCT--CCATGGCAGACATGTAATGGGATGACACGGTCCAATAAAC--GAAGGA---------------AAAACAACAGGTGGAGA--CCCCTGGCAACCTCAGGCAGCTTCATGCCAG-----CCAGTA--------AGAAAGTAA-ATCCCCAAGCCTTCTGTAAACT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94650 158 + 211231 ggcatttctaacgtgcc-caggGACCGCAGTTTGA-----AAACCT--CCATGGCAGACATGTGATGGGATGACACGGTCCAATAAAC--GAAGGA---------------GAAACAGCAGGTGGAGA--CCCCCGGCAACCTCAGGCAGCTTCATCCCAG-----CCAGTA--------AG--------------AAGCCGTCTGTAAACT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 59790 175 + 2165740 TGTACTTCTAACATGTC-TAGTGGCC-CACTTTGA-----AAA-----CCATGGAAGACATGAAATAAAATGACATGGTCCAACAAAC---ATGGA---------------AAAAGGACAGGTGGGAG-AGTGCTGACAACCTTGGGCAGCTTCTTCCCAA-----CCACTACTTTAATGAGAAAATAA-ATGCCAACGTATTTTGTAAACT i otoGar3.GL873745 C 0 I 404 s canFam3.chr34 30191265 170 - 42124431 tgcatgtgtagtatgtt-cAGGGCCCACCCTTTGA-----AAACCA--CC----------TG-TTTGGGGTGATGTGGT-CAACAAAC---ATGGAGATGATTTTC---AGAAGATAACAGGTGGAGAGATGACTGACAACTTCAGAC--CTCCATGCTAA-----CCAGTA-------GATGAAACAGCGTGCCAAAGAATATTGCAGA-- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 577831 175 + 913073 TATATTTTCACCATTTCACAATGATGAcagattaaactacaaaccaagttactgtgaaagtgaacaggcatgacgtggttaaacaaacatgaaggagctaattttcagaagaaaataaTA--------------------------ACAGCTTCATCCCAATTGATTTATTG--------AGAATATAT-GTGGGAAGACGTTTTGTAAA-- i dasNov3.JH577625 I 13689 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=12525.000000 s hg38.chr3_KI270779v1_alt 62104 3 + 205312 AAG s gorGor5.CYUI01000576v1 59134 3 + 106623 AAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230335 3 + 180051392 AAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53478 3 - 100774 AAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212409 3 + 218577 AAG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38957 3 - 74206 AAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 170877 3 - 204313951 AAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 132663 3 - 16417988 AAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235040 3 + 306014 CAG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94808 3 + 211231 AAG i aotNan1.NW_018494784v1 C 0 C 0 s canFam3.chr34 30191435 2 - 42124431 -AG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 578006 1 + 913073 --G i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 59965 404 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=291841.000000 s hg38.chr3_KI270779v1_alt 62107 61 + 205312 AGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAC s gorGor5.CYUI01000576v1 59137 61 + 106623 AGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGAACAAAGAATTAAAAAC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230338 60 + 180051392 AGGAAGTATTAATATGGACG-TTGAGCAGACATTTAAGTGTCAGGACAAATAATTAAAAAC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53481 61 - 100774 AGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCGGGACAAAGAATTAAAAAC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212412 61 + 218577 AGGAAGTATTTATATGGACGTTTGAGCAGACATTTAAGTGTTAGGACAAAGAATTAAAAAC i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 38960 61 - 74206 AGGAAGTATTTATATGGACGTTTGAGCAGACGTTTAAGTGTTAGGACAAAGAATTAAAAAC i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 170880 60 - 204313951 A-GTAGTATTAACACGGGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAGC i calJac3.chr2 C 0 I 294 s saiBol1.JH378155 132666 60 - 16417988 A-ATAGTGTTAACACAGGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAC i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235043 58 + 306014 ---TAGTATTAGCATGAGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 94811 58 + 211231 ---TAGTATTAACACGGGTGTTTGAGCAAACATTTAAGCGTTGGGACAAAGAATTAAAACC i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 60369 56 + 2165740 AGGAAGTATTAGTGTGGGTGTCTGAGCA-ACATTT----GTTAGGACAATGAATTAAAAAC i otoGar3.GL873745 I 404 C 0 s canFam3.chr34 30191437 60 - 42124431 TGGAAGTATAAATATGGGCATCTAAACA-TCATTTAAGTGTTAGGACAATGAATGAAAAGC i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 578007 59 + 913073 TGTAAGTATTAATATGGGCATTTGAGCA-ACATTTATATGTTAG-ACAATGAATTTAAAAC i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=16911.000000 s hg38.chr3_KI270779v1_alt 62168 3 + 205312 TAG s gorGor5.CYUI01000576v1 59198 3 + 106623 TAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230398 3 + 180051392 TAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53542 3 - 100774 TAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212473 3 + 218577 TAG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 39021 3 - 74206 TAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171234 3 - 204313951 TAG i calJac3.chr2 I 294 C 0 s saiBol1.JH378155 132726 3 - 16417988 TAG i saiBol1.JH378155 C 0 I 305 s cebCap1.NW_016108150v1 235101 3 + 306014 TGG i cebCap1.NW_016108150v1 C 0 I 309 s aotNan1.NW_018494784v1 94869 3 + 211231 TGG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 60425 3 + 2165740 TAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191497 3 - 42124431 TGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 578066 2 + 913073 -AG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=38556.000000 s hg38.chr3_KI270779v1_alt 62171 6 + 205312 CACAGG s gorGor5.CYUI01000576v1 59201 6 + 106623 CACAGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230401 6 + 180051392 CACAGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53545 6 - 100774 CACAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212476 6 + 218577 CACAGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 39024 6 - 74206 CACAGG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171237 6 - 204313951 CACAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133034 6 - 16417988 CACAGG i saiBol1.JH378155 I 305 C 0 s cebCap1.NW_016108150v1 235413 6 + 306014 CACAGG i cebCap1.NW_016108150v1 I 309 C 0 s aotNan1.NW_018494784v1 94872 6 + 211231 CACAGG i aotNan1.NW_018494784v1 C 0 I 301 s otoGar3.GL873745 60428 6 + 2165740 GACAAG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191500 6 - 42124431 CAAAGG i canFam3.chr34 C 0 I 2 s dasNov3.JH577625 578068 6 + 913073 CACAGG i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=1225589.000000 s hg38.chr3_KI270779v1_alt 62177 328 + 205312 CACCCCTGAAGCATGATAGGATG-G--------------------CAACAGAAGGGCTGATTTAGTTTCCAAGAAATAACTGACAGGCAGTG---TTGTGCGTGTGT--C----TACTACTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------GTAA----TGAGTCATGGA--ACA----ATGTTTCATATTGAAAATGTTTTTGTA-AATGTGGGTTTCAGGGTTTCAAAGTGAACC--CATATGTGTTAGGAGAAAGGACACACCAAAGAAG------TAAAATAA----TTGGGTCAATATAAAAA---- s gorGor5.CYUI01000576v1 59207 330 + 106623 CACCCCTGAAGCATGATAGGATG-G--------------------CAGCAGAAGGGCTGATTTAGTTTCCGAGAAATAACTGACAGGCAGTG---TTGTGCGTGTGTGTC----TACTACTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAACGTTGATGGTA---------------------------------------------------------------------------------------------GTCCA--------------------------------------------------------------------GTAA----AGAGTCATGGC--ACA----ATGTTTCATATTGAAAATGTTTTTGTA-AATGTGGGTTTCAAGGTTTCAAAGTGAACC--CATATGTGTTAGGAGAAAGGACACACCAAAGAAG------TAAAATAA----TTGGGTCAATATAAAAA---- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230407 330 + 180051392 CACCCCTGAAGCATGATAGGATG-G--------------------CAACAGAA-GGCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGT--CTACTTACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAA----TGAGTCATGGA--ACC----ATGTTTCATACCAAAAATA-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAGTGAACC--CATATGTGTTAGAAGAAAGGACACACCAAAGAAG------TAAAATAA----TTGGGTCAATATAAAAT---- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53551 326 - 100774 CACCCCTGAAGCATGATAGGATG-G--------------------CAACAGAA-GGCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGT--C----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAA----TGAGTCATGGA--GCC----ATGTTTCATACCGAAAATA-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAGTGAACC--CATATGTGTTAGGAGAAAGGACACACCAAAGAAG------TAAAATAA----TTGGGTCAATATAAAAT---- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212482 326 + 218577 CACCCCTGAAGCATGATAGGATG-G--------------------CAACAGAA-GGCTGATTTAGTTTCCGAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGT--C----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACGAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAA----TGAGTCATGGA--ACC----ATGTTTCATACCGAAAATG-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAGTGAATC--CATATGTGTTAGGAGAAAGGACACACCAAAGAGG------TAAAATAA----TTGGGTCAATATAAAAT---- i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 39030 326 - 74206 CACCTCTGAAGCATGATAGGATG-G--------------------CAACAGAA-GGCTGATTTAGTTTCTGAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGT--C----TACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACGAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAA----TGAGTCATGGA--ACC----ATGTTTCATACCGAAAATG-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAGTGAACC--CATATGTGTTAGGAGAAAGGACACACCAAAGAGG------TAAAATAA----TTGGGTCAATATAAAAT---- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171243 319 - 204313951 CACCCCTGAAGTATGATAGGGTG-G--------------------CAACGGAAGGGCCAATC-----------GAATAACTGCTGGGCAGCTTCCTTGTGTGTATGT--C----TACTA---AGGAATCAGAAACAAACCCTCAGACAGTTCTCATGAGTA--CTGAGACCAAGGAAGCCACTGGGCAGTGGGTGGTCTGAAAA-GTAAATTTTTATAGTG---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAATTACTGAGTCATAGA--ACG----ATGTTTCATATTGAAAATG-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAATGAACC--CATGCTTGTTCAGAGAAAGGACAAACCAAAGAAG------TAAAATCA----TTGGGTCAATATAAAAA---- i calJac3.chr2 C 0 I 4 s saiBol1.JH378155 133040 332 - 16417988 CACCCCTGAAGCATGATAGGATGCG--------------------CAACGGAAGGGCCAATTTCATTTCCAAGAAATAACTGCTGGGCAGCTTCCTTGTGTGTATGT--C----TACTA---AGGAACCAGAAACAAATCTTCAGACAGTTTTCATGAGTA--CTGAGACCAAGAAAACCATTGGGCAGTGGGTGGTCTGAAAATGTAAATTTTTATAGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAATTACTGAGTCATGGA--ATG----ATGTTTCATATTGAAAATG-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAATGAACT--CATACTTGCTAGGAGAAAGGACAAACCAAAGAAG------TAAAATAA----TTGGGTCAATATAAAAA---- i saiBol1.JH378155 C 0 I 146 s cebCap1.NW_016108150v1 235419 331 + 306014 CACCCCTGAAGCATGATAGGATG-G--------------------CAACAGAAGGACCAATTTAGTTTCCAAGAAATAACTGCTGGGCAGCTTCCTTGTGTGTATGT--C----TACTA---AGGAACCAGAAACAAACCTTCAGACAGTTTTCATGAGTA--CTGAGACTAAGAAAACCATTGGGCAGTGGGTGGTCTGAAAATGTAAATTTTTATAGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAATTACTGAGTCATGGA--ACG----ATGCTTCATATTGAAAATG-TTTTGTA-AATGTGGGTTTCAGGGTTTCAAAATGAACC--CATACTTGTTAGGAGAAAGGACAAACCAAAGAAG------TAAAATAA----TTGGGTCAATATAGAAA---- i cebCap1.NW_016108150v1 C 0 I 4 s aotNan1.NW_018494784v1 95179 330 + 211231 CACCCCTGAAGCATGATAGGATG-G--------------------CAACGGAAGCGCCAATTTAGTTTCCAAGAAGTAACTGCTGGGCAGCTTCCTTGTGTGTGTGT--C----TACTA---CGGAACCAGAAACAACCCTTCAGACAGTTTTCATGAGTT--CTGAGACCAGGAAAACCACTGGGCAGTGGGTGGTCTGAAAATGTAAA-TTTTATAGCA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAATTACTGAGTCATGAA--ATG----ATGTTTCATATTGAAAATG-TTTTGTA-AATGTGGGTTTCAGGGTTTCAGAATGAACC--CATACTTGTTAGGAGACAGGACAAACCAAAGAAG------TAAAATAA----TTGGGTCAATATCAAAA---- i aotNan1.NW_018494784v1 I 301 I 4 s otoGar3.GL873745 60434 304 + 2165740 TACCCCTGA------------TG-G--------------------C-----AAGGGCCCATTTGG-TTCAAAGAAATAAGTGATGGGA-------TGATTTCCTTGT--C----TACTAGTTTTGAACCAAAGACAAGCATTTAAA----TTCCATTAATA--TTGAGACCAAGATGATCATTGGGGAATGGGTAGTCTGGAAATGTAAATGTTTATGGTA---------------------------------------------------------------------------------------------CTCCA--------------------------------------------------------------------CTAATTAATGAGCCACAGGTCAGA----ATGTTTTATGTTAAAAATG-TTTTGTA-GATATGTGTTTCAGAGTTTAAAAATGAACCCACACATTTGGTTGGGGAATAGA-----CAAAGAAA------TAAAAAAA----TTGGTTCAATATGAAAA---- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191508 483 - 42124431 GGTACCTGAAGCATAATTAGATG------------------------ACAGAAGGGCTGATT-GGTTTCAAAGAAGTAACTG--AGGCCCTG---GCTTCCTTATAT--C----TGCTACTTTTCAACCAAAAGTCAACCTGTGGACCATTTTTATGAACATTCTGAAACCAAGAAAATCAC--GGGAGTAG---GTCTGGAAATACAAGTTCCTATGGGACAGAATATTTCATACTGGTAATATGGGTttttttttgtttgtttgttttattcatgagagacaggcagagatgtaggcagagtgagaagcaggctccatgcagagaccccaatgtgggactctattccgggattgctggatcatgccctgagctgaaggcagaagctcaactgctgagccaccca--ggc----at-ctcTGTACTGGAAATA-TTTTGTACAATGTATA-TTCAAGGTTCTAAGA-GAACC--CACA--TGTTAGGGGAATTTACAGAGCAGAGAAATTTTTTTTAAATG------TGCATCAAGGTAAAAA---- i canFam3.chr34 I 2 C 0 s dasNov3.JH577625 578074 242 + 913073 -TACCCTAAAGTGTGCTAGGATG-GGGCCCAGGAGTGGCCAGTGACAATACAAGGATTGATT-GGTTTTCAAAAGGTAACTG-------------TT---------T--C----TA----------------------------------------GAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------GTCCA--------------------------------------------------------------------CTAGTTAATGAG-CATGGA--GTCGAATATATTTCATATTGGCAAAC-CTTGTAA-AATATGTGTACCGTGGTTTCAAAAAGAACC--CACATGTGC-AGGGGAATTGACAAACCAGAGAAG------AAAAAAAAAAACTTGGGTCAAGATACAAAGAAA i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=307670.000000 s hg38.chr3_KI270779v1_alt 62505 67 + 205312 G----TAGAATATTGCCCAGAGAGAAGATGTGGATAATTCCTAATACGGATCAAAGGCACCAAA------------------------------------------------------------------------------------AAGGTGA s gorGor5.CYUI01000576v1 59537 71 + 106623 GAAAATAGAATATTGCCCAGAGAGAAGATGTGGATAATTCCTAACACGGATCAAAGGCACCAAA------------------------------------------------------------------------------------AAGGTGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230737 71 + 180051392 GAAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAA------------------------------------------------------------------------------------AAGGTGA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53877 71 - 100774 GAAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAA------------------------------------------------------------------------------------AAGGTGA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 212808 71 + 218577 GAAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAA------------------------------------------------------------------------------------AAGGTGA i cerAty1.NW_012004452v1 C 0 I 224 s manLeu1.NW_012101728v1 39356 71 - 74206 GAAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAA------------------------------------------------------------------------------------AAGGTGA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171566 67 - 204313951 ----GTAGAATGTTGCCCGGAGAGAAGGCGTGGATAATTCCTAACACGGATCAAAGGCAGGAAA------------------------------------------------------------------------------------AAGGTGA i calJac3.chr2 I 4 C 0 s saiBol1.JH378155 133518 67 - 16417988 ----GTAGAATGTTGCCTAGAGAGAAGGCGTGGATAATTCCTAACATGGATCAAAGGCAGGAAA------------------------------------------------------------------------------------AAGGTGA i saiBol1.JH378155 I 146 C 0 s cebCap1.NW_016108150v1 235754 67 + 306014 ----GTAGAATGTTGCCCAGCGAGAAGGTGTGGATAATTCCTAACACGGATCAAAGGCAGGAAA------------------------------------------------------------------------------------AGGGTGA i cebCap1.NW_016108150v1 I 4 C 0 s aotNan1.NW_018494784v1 95513 67 + 211231 ----GTAGAATGTTGCCCAGAGAGAAGGCGTGGATAATTCCTAACACGGGTCGAAGGCAGGAGA------------------------------------------------------------------------------------AAGGTGA i aotNan1.NW_018494784v1 I 4 C 0 s otoGar3.GL873745 60738 61 + 2165740 ----GTAGAATACAGCCTAAAGGGAAAAT----ATAATTTCTAACATGGATCAAATGAAGCAAA------------------------------------------------------------------------------------AAGAT-- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30191991 67 - 42124431 ---ACTAGAATACTATCCAGAGAGA---TGTGGTTAATTTCTAATATGGATCAAAAGCAAAAAA----------------------------------------------------------------------------------TTAAGATAC i canFam3.chr34 C 0 I 16 s dasNov3.JH577625 578316 151 + 913073 ----GTAGACTACTGCCCAGAGAGAAGATATGGATAATTTCTAATGTGGATCAAAAGCAAAAAAGTGACAAATAATAAAAAGTTGTAATAAAACctgtcctgttcagtacaacagccatggtcacatgtggctattttaatttaaattaagctga i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=48736.000000 s hg38.chr3_KI270779v1_alt 62572 22 + 205312 ------GCTGT---GAGTA-------------------AGATA-TTCAGAC---------- s gorGor5.CYUI01000576v1 59608 22 + 106623 ------GCTGT---AAGTA-------------------AGATA-TTCAGAC---------- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230808 22 + 180051392 ------GCTGT---GTTTA-------------------AGATA-TTCAGAC---------- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 53948 22 - 100774 ------GCTGT---GTTTA-------------------AGATA-TTCAGAC---------- i macNem1.NW_012013899v1 C 0 I 756 s cerAty1.NW_012004452v1 213103 22 + 218577 ------GCTGT---GTGTG-------------------AGATA-TTCAGAC---------- i cerAty1.NW_012004452v1 I 224 C 0 s manLeu1.NW_012101728v1 39427 22 - 74206 ------GCTGT---GTTTA-------------------AGATA-TTCAGAC---------- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171633 22 - 204313951 ------GCTGT---GTCTG-------------------AGATA-CTCAGAC---------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133585 22 - 16417988 ------GCTGG---GTCTG-------------------AGATA-CTCAGAC---------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235821 22 + 306014 ------GCTGT---GTCTG-------------------AGATA-CTCAGAC---------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 95580 22 + 211231 ------GCTGT---GTCTG-------------------AGACG-CTCAGAC---------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 60799 16 + 2165740 ----------------ATA-------------------AAGTGTTTCAGAC---------- i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30192074 41 - 42124431 ------Actgt---ccatagcattagccatagccacatagcta-tttaagc---------- i canFam3.chr34 I 16 I 44 s dasNov3.JH577625 578467 41 + 913073 aatgtggctatttaattta-------------------aaata-taaattctattccacag i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=4947.000000 s hg38.chr3_KI270779v1_alt 62594 12 + 205312 CTGCACcatccc s gorGor5.CYUI01000576v1 59630 12 + 106623 CTGCACCGTCCC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230830 12 + 180051392 CCGCACCATCCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 54726 12 - 100774 CTGCACCGTCCC i macNem1.NW_012013899v1 I 756 C 0 s cerAty1.NW_012004452v1 213125 12 + 218577 CTGCACcatccc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 39449 12 - 74206 CCGCACCATCCC i manLeu1.NW_012101728v1 C 0 I 448 s calJac3.chr2 171655 3 - 204313951 CTG--------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133607 3 - 16417988 CTG--------- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235843 3 + 306014 CTG--------- i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 95602 3 + 211231 CTG--------- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 60815 12 + 2165740 Atgccctggcca i otoGar3.GL873745 C 0 I 7 s canFam3.chr34 30192159 12 - 42124431 ttgatccatttc i canFam3.chr34 I 44 C 0 s dasNov3.JH577625 578508 12 + 913073 ttgcactagtcc i dasNov3.JH577625 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=650.000000 s hg38.chr3_KI270779v1_alt 62606 1 + 205312 a s gorGor5.CYUI01000576v1 59642 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 230842 1 + 180051392 G i rheMac8.chr6 C 0 I 432 s macNem1.NW_012013899v1 54738 1 - 100774 G i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213137 1 + 218577 a i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 39909 1 - 74206 G i manLeu1.NW_012101728v1 I 448 C 0 s canFam3.chr34 30192171 1 - 42124431 a i canFam3.chr34 C 0 I 4 s dasNov3.JH577625 578520 1 + 913073 a i dasNov3.JH577625 C 0 I 5 e otoGar3.GL873745 60827 7 + 2165740 I e mm10.chr13 46099921 2341 - 120421639 I e aotNan1.NW_018494784v1 95605 0 + 211231 C e cebCap1.NW_016108150v1 235846 0 + 306014 C e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 171658 0 - 204313951 C e saiBol1.JH378155 133610 0 - 16417988 C e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=204090.000000 s hg38.chr3_KI270779v1_alt 62607 91 + 205312 ----agcagtagccaca-g-----------------------------------------------------------------------------tggcaagtagcctcctcactggacagtgcagctacggaatgatgccatcaccggaaagttccatcagccagcaccgA s gorGor5.CYUI01000576v1 59643 91 + 106623 ----AGcagtagccaca-g-----------------------------------------------------------------------------tggcaagtagcctcctcacgggacagtgcagctacggaacgatgccgtcaccggaaagttctatcagccagcaccgA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231275 91 + 180051392 ----AGcagtagacaca-g-----------------------------------------------------------------------------tggcaagtagcctccgcactggacagtgcagctatggaacgatgctatcaccggaaagttccatcagccagcactgA i rheMac8.chr6 I 432 C 0 s macNem1.NW_012013899v1 54739 91 - 100774 ----AGcagtagacaca-g-----------------------------------------------------------------------------tggcaagtagcctccgcactggacagtgcagctatggaacgatgctatcaccggaaagttccatcagccagcactgA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213138 91 + 218577 ----agcagtagacaca-g-----------------------------------------------------------------------------tgacaagtagcctccgcactggacagtgcagctatggaacgatgctatcaccggaaagttccatcagccagcactgA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 39910 91 - 74206 ----AGcagtagacaca-g-----------------------------------------------------------------------------tggcaagtagcctccgcactggacagtgcagctatggaacgatgctatcaccggaaagttccatcagccagcactgA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171658 61 - 204313951 ----------------------------------------------------------------------------------------------------------------CACTGGGCTGTGCAGCTGCGGAACGGTGGCATCGCCGGGAAGTTCCATCGGCCAGCACTGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133610 61 - 16417988 ----------------------------------------------------------------------------------------------------------------CACTGGACTGTGCGGCTGTGGAACGGTGGCCTCGCCGGAAAGTTCCATCGGCCAGCACTGA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235846 61 + 306014 ----------------------------------------------------------------------------------------------------------------CACTGGACTGTGCAGCTGCGGAACAGTGGCCTCGTCAGAAAGCTCCATTGGCCAGCACTGA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 95605 60 + 211231 ----------------------------------------------------------------------------------------------------------------CACTGGACTGTGCAGCTGCAG-ACACTGGCACCGCCGGAAAGTTCCACCGGCCAGCACTGA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 60834 146 + 2165740 ----agccacagccaca-gccacacagctacttatatgctttaaattaattaaaatgacaatttaaaatccatttcaggtacttaggggctccctctggtaagtagctgccatactgcacagagtggacacag----------------------tgcatCAGCCAGCACTGA i otoGar3.GL873745 I 7 C 0 s canFam3.chr34 30192176 86 - 42124431 ----gtcagtagctacatg-----------------------------------------------------------------------------tggcaagtggctgccacactggacagcagagcagtcggattgttgca------gaaagttctgttCACCAACAGCAG i canFam3.chr34 I 4 C 0 s dasNov3.JH577625 578526 93 + 913073 agcgttcagtagcctcatg-----------------------------------------------------------------------------aggcaagcagttaca-tattagatggtgcagataaagaacaattccatcacc--acagttctgtcacccagcactgA i dasNov3.JH577625 I 5 C 0 e mm10.chr13 46099921 2341 - 120421639 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=168161.000000 s hg38.chr3_KI270779v1_alt 62698 53 + 205312 TGCAGACCTTTGCAACTG-CCCCTCACGCTGGACAGCACCTGTTT-GATAGATTG s gorGor5.CYUI01000576v1 59734 54 + 106623 TGCAGACCTTTGCAAATG-CCCCTCACACTGAACAGCACCTGTTTTGATAGATTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231366 54 + 180051392 CGCAGACCTTTGCAAATGCCCCCTCACACCGAACAGCACCTATCT-GATAGATTG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 54830 54 - 100774 CGCAGACCTTTGCAAATGCCCCCTCACACCGAACAGCACCTATCT-GATAGATTG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213229 54 + 218577 CGCAGACCTTTGCAAATGCCCCCTCACACCGAACAGCACCTATTT-GATAGATTG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40001 53 - 74206 CGCAGACCTTTGCAAATG-CCCCTCACACCGAACAGCACCTATTT-GATAGATTG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171719 49 - 204313951 TGT-GGCCTTTGCCCACGCTCTCTCACACTGAACAGCACCTATCA-----GAGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133671 49 - 16417988 TGC-GGGCTTTGCCCACGCCCTCTCACACTGAACAGCACCTATTT-----GAGTG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235907 49 + 306014 TGT-GCCCTTTGCCCACACCCTCTCACACTGAACAGCACCTATTT-----GAGTG i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 95665 49 + 211231 TGT-GGCCTTTGCCCACGCCCTCTCACGCTGAACAGCACCTGTTT-----GAGTG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 60980 54 + 2165740 TACAGACATTTGCTGATACCCTTTTACATTAAACAACATATATTT-GACAAATTA i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46102262 51 - 120421639 TGTGGACGTTTGC---TGCTCCCTCACACCATCTAGCGCACATTT-GACACACTC i mm10.chr13 I 2341 C 0 s canFam3.chr34 30192262 44 - 42124431 --------TATACACAGTCACTAGTGTATTAAACAGCACCTAT---GATAAATTG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 578619 53 + 913073 TGTAGACATTTGCTAATATCCTCATA-ATAAAAAACCATATATTT-GACAAACTG i dasNov3.JH577625 C 0 I 753 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=165471.000000 s hg38.chr3_KI270779v1_alt 62751 43 + 205312 TCCACTACGCAGTGAAAAGCCTGGGTGAAAAGCGGTATTTGGT s gorGor5.CYUI01000576v1 59788 43 + 106623 TCCACTACACAGTGAAAAGCCTGGGTGAAAAGCAGCATTTGGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231420 43 + 180051392 TCCACTACTCAGTGAAAAGCCTGTGTTAAAAGCGGTATTTGGT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 54884 43 - 100774 TCCACTACTCAGTGAAAAGCCTGTGTTAAAAGCGGTATTTGGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213283 43 + 218577 TCCACTACTCAGTGAAAAGCCTGTGTTAAAAGCGGTATTTGGT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40054 43 - 74206 TCCACTACTCAGTGAAAAGCCTGTGTTAAAAGCGGTATTTGGT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171768 43 - 204313951 TCCACTACTCAGTGAAACGCCTGTGTGAAAAGCGGTATTTGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133720 43 - 16417988 TCCACTACTCAGTGAAACGCCCGTGTGAAGAGCGGTATTTGGT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 235956 43 + 306014 TCCACTACTCAGTGAAACGCCCGTGTGAAAAGCAGTACTTGGT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 95714 43 + 211231 TCCGCTACTCAGTGAAACGCCTGTGTGAAAAGCGGTATTTGGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61034 29 + 2165740 T---CTACTCAGTGAGAAGCCCTAGTTAAATG----------- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46102313 27 - 120421639 ATCAATACTCACTAAGAAGCTTGAGTT---------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30192306 27 - 42124431 GCCACTACCTAATATAAAACCTGAGTT---------------- i canFam3.chr34 C 0 C 0 e dasNov3.JH577625 578672 753 + 913073 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=46069.000000 s hg38.chr3_KI270779v1_alt 62794 11 + 205312 AGAAGAGCAAA s gorGor5.CYUI01000576v1 59831 11 + 106623 AGAAGAGCAAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231463 11 + 180051392 AGAAGAGCAAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 54927 11 - 100774 AGAAGAGCAAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213326 11 + 218577 AGAAGAGCAAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40097 11 - 74206 AGAAGAGCAAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171811 11 - 204313951 AGAAGAGTAAA i calJac3.chr2 C 0 I 2 s saiBol1.JH378155 133763 11 - 16417988 AGAAGAGCAAA i saiBol1.JH378155 C 0 I 2 s cebCap1.NW_016108150v1 235999 11 + 306014 AGAAGAGCAAA i cebCap1.NW_016108150v1 C 0 I 2 s aotNan1.NW_018494784v1 95757 11 + 211231 AGAAAAGCAAA i aotNan1.NW_018494784v1 C 0 I 15 s otoGar3.GL873745 61063 8 + 2165740 AAAAGAAC--- i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 579425 11 + 913073 aaacgagggag i dasNov3.JH577625 I 753 C 0 e mm10.chr13 46102340 0 - 120421639 C e canFam3.chr34 30192333 0 - 42124431 C e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=-19593.000000 s hg38.chr3_KI270779v1_alt 62805 17 + 205312 -AAGGGGAAAA-AAATTAA s gorGor5.CYUI01000576v1 59842 16 + 106623 -AAGGGGAAAA-AA-TTAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231474 15 + 180051392 -ACGGGAAAAA-A--TTAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 54938 15 - 100774 -ACGGGAAAAA-A--TTAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213337 15 + 218577 -ACGGGAAAAA-A--TTAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40108 15 - 74206 -ACGGGAAAAA-A--TTAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171824 12 - 204313951 -AGAGGGGGAGAA------ i calJac3.chr2 I 2 C 0 s saiBol1.JH378155 133776 9 - 16417988 -AGGGGGAG---A------ i saiBol1.JH378155 I 2 C 0 s cebCap1.NW_016108150v1 236012 11 + 306014 -AGGGGGGAAC-A------ i cebCap1.NW_016108150v1 I 2 C 0 s mm10.chr13 46102340 7 - 120421639 -ACATAAA----------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30192333 7 - 42124431 -AAATAAA----------- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 579436 17 + 913073 gagggggaaat-aaataa- i dasNov3.JH577625 C 0 I 2 e otoGar3.GL873745 61071 0 + 2165740 C e aotNan1.NW_018494784v1 95768 15 + 211231 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=922230.000000 s hg38.chr3_KI270779v1_alt 62822 232 + 205312 AAGTAGTAGGTCATTGTCCGCCAAACTGAATTCTGGCAGAAGAATGTTGGAAGCAAGATGGGAGCCACAGGAGAAAGTATCC---TT---GTCCCA-------AGACAGGAGG---GG-GTGCCAGGCATGGTTGGCT-CTGT-GCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGA---AAGATTCT--GTGTGCTTATG-TCAAGATGCA-GCCGTCCGTGATCC---TGAGAAAATAA s gorGor5.CYUI01000576v1 59858 231 + 106623 AAGGAGTAGGTCATTGTCCTCCAAACTGAATTCTGGCAGAAGAATGTTGGAAGGAAGATGGGAGCCACAGGAGAAGGTATCC---TT---GTCCCA-------AGACAGGAGG---GG--TGCCAGGCATGGTTGGCT-CTGT-GCCTGGAATCCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGA---AAGATTCT--GTGTGCAGATG-TCACGATGCA-GCCGTCTGTGGTCC---TGAGAAAATAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231489 232 + 180051392 AAGTGGCAGGTCATTGTCTTCCATACTGAATTCTGGCAGAAGAATGTTGCAAGGAAGACGGGAGCCACAGGAGAAAGTATCC---TT---GTCCCA-------AGACAGGAGG---GG-GTGCCAGGCACGGTTGGCT-CTGT-CCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGA---AAGATTCT--GTGTGCAAATG-TCATGATGCA-GCCGTCAGTAATCC---TGAGAAAATAA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 54953 232 - 100774 AAGTGGCAGGTCATTGTCTTCCATACTGAATTCTGGCAGAAGAATGTTGCAAGGAAGACGGGAGCCACAGGAGAAAGTATCC---TT---GTCCCA-------AGACAGGAGG---GG-GTGCCAGGCACGGTTGGCT-CTGT-CCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGA---AAGATTCT--GTGTGCAAATG-TCATGATGCA-GCCGTCAGTAATCC---TGAGAAAATAA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213352 232 + 218577 AAGTGGCAGGTCATTGTCTTCCATACTGAATTCTGGCAGAAGAATGTTGCAAGGAAGACGGGAGCCACAGGAGAAAGTATCC---TT---GTCCCA-------AGACAGGAGG---GG-GTGCCAGGCATGGTTGGCT-CTGT-CCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGA---AAGATTCT--GTTTGCAAATG-TCATGATGCA-GCCGTCAGTAATCC---TGAGAAAATAA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40123 232 - 74206 AAGTGGCAGGTCATTGTCTTCCATACTGAATTCTGGCAGAAGAATGTTGCAAGGAAGACGGGAGCCACAGGAGAAAGTATCC---TT---GTCCCA-------AGACAGGAGG---GG-GTGCCAGGCATGGTTGGCT-CTGT-CCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGA---AAGATTCT--GTTTGCAAATG-TCATGATGCA-GCCGTCAGTAATCC---TGAGAAAATAA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 171836 227 - 204313951 AAAGGGTAGGTCATTCTCTTCCATATTGAATTCTGGCAGAACAATGTTGGAAGGAACACGGGAGCCACAGGAGAAAGTA-----------GTCCCA-------GGACAGAAGG---GG-GTGCCAGGCACGGTTGGCT-CTGT-CCCTGGAATTCCATGGCTGGAATCTGGAAAAAGGGAAAGTGACTGAAAAAGGA---AAGATTCT--GTGTGCAAATG-TCACGATGCA-CCGGTCAGTGATCC---TGAAAAAATAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 133785 227 - 16417988 AAATGGTAGGTCATTCTCTTCCATACTGAATTCTGGCAGAAAAATGTTGGAAGGAACACGGGAGCCACAGGAGAAAGTA-----------GTCCCA-------GGACAGGAGG---GT-GTGCCAGGCACGGTTGGCT-CTAT-CCCTGGAATTCCACAGCTGGAATCTGGAAAAAGGGAAAGTGACTGAAAAAGGA---AAGATTCT--GTGTGCAAATG-TCACAATGCA-GCAGTCAGTGATCC---TGAGAAAATAA i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 236023 230 + 306014 AAGTGGTAGGTCATTCTCTTCCATACTGAATCCTGGCAGAAAAATGTTGGAAGGAGCACGGGAGCCACAGGAGAAAGTA-----------GTCCTA-------AGATGGGGGGGCAGG-GTGCCAGGCACGGTTGGCT-CTGT-CCCTGGAATTCCAAGGCTGGAACCTGGAAAAAGGGAAAGTGATTGAAAAAGGA---AAGATTCT--GTGTGCAAATG-TCACGATGCA-GCGGTCAGTGATCC---TGAGAAAATAA i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 95783 226 + 211231 AAGTGGTAGGTCATTCTCGTCTGTACCGAATTCTGGCAGAAAAATGTTGGAAGGAACACGGGAGCCACAGGAGAAAGTA-----------GTCCCA-------AGACAGGAG----GG-GTGCCAGGCACGGTTGGCT-CTGT-CCCTGGAATTCCATGGCTGGAATCTGGAAAAAGCAAAAGGGACTGAAAAAGGA---AAGATTCT--GTGAGCAAATG-TCACAATGCA-GCGGTCAGTGACCC---TGAGAAAATAA i aotNan1.NW_018494784v1 I 15 I 62 s otoGar3.GL873745 61071 203 + 2165740 ----------TCAT--------------AATTCTGACAG-AGCATATTGGA---AAAACAGGAACCACAGGAGAAAGTATCC---TTGTCATCCTT-------AGACAGGAAG---GG-G-ACTGTGCAGGACAGTCTGCTAT-CACTGGAATT--ATAGCAGGAGGCT-AAAAAATAGAAATTGAGTATAAAACAA---AAG-CTCA--GCATGCAGATG-TTATGACACA-GCCATCAGGGACTC---TGTGAGAATAA i otoGar3.GL873745 C 0 I 1 s mm10.chr13 46102347 174 - 120421639 GAGTGATAGG---TTCTCTTTAGTATTAAATTCAAACC--AGAATTTT---------ATTGGAGCCAAGTGACA----------------GTTTTAACACTAGAGAAAGAAGG---GT-GTGCTGAGCATATTTGGCT---------------------------ATCAGGAA------AAGTTAACTGAAAATTTG---TC--TTCC--ATGTGCAAATGTTCAGGGTGCATTCCACCAGT-------------AAGCAA i mm10.chr13 C 0 C 0 s canFam3.chr34 30192340 189 - 42124431 AAGTGGTCAGTCATTCTCTTTCATACTGAATTCTGACA-----ATATTG-----------------------------------------GTTGGA-------AAGGAGGCGG---AG-GC-CTGGGCACAGCTGGCT-CCATCCCCTAGAATTCTGCA-CCAGAGTCTGTAAAAGGG--AAGTGAC-----AGAGA---AGGTCTCTA-GCGTGTAAATG-TCACAGTACAAGTCATTGGTGGTCTTGATGAGAAAATAA i canFam3.chr34 C 0 I 10 s dasNov3.JH577625 579455 211 + 913073 aaataaaaagttatt---------------------taaaaaaaAGT----------ACAGGAACCATGAGAAAAAGTATCAGAGTC---ATCTGA-------TGATGTGAGG---GGAGGACTGGGCATAATCTGCT-CTATTCCCTAGAATTCTACAGCCAGAGGTTCTAA---GGGAAAGTGACTGAAAAAGGAGGCAAGGTCCCAGGAGTGCAGATC-TCACAATGCA-ATGGTCATTGAGTCTACTGAGAAAataa i dasNov3.JH577625 I 2 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=100464.000000 s hg38.chr3_KI270779v1_alt 63054 62 + 205312 GTGAA-CAAAGTGGCTTTGGAGGGA----CGCT---GTTGGATAC-------ACAAACAGATACA-ATGTGCACTTGC s gorGor5.CYUI01000576v1 60089 62 + 106623 GTGAA-CAAAGTGGCTTTGGAGGGA----TGCT---GTTGGACAC-------ATGCACAGATACA-ATGTGCACTTGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231721 63 + 180051392 GTGAACCAAAGTGGCTTTGGAGAGA----TGCT---GCTGGATAC-------ATGTACAGACACA-ATGTACACTTGC i rheMac8.chr6 C 0 I 1 s macNem1.NW_012013899v1 55185 63 - 100774 GTGAACCAAAGTGGCTTTGGAGAGA----TGCT---GCTGGATAC-------ATGTACAGACACA-ATGTACACTTGC i macNem1.NW_012013899v1 C 0 I 1 s cerAty1.NW_012004452v1 213584 63 + 218577 GTGAACCAAAGTGGCTTTGGAGAGA----TGCT---GCTGGATAC-------ATGTACACACACA-ATGTACACTTGC i cerAty1.NW_012004452v1 C 0 I 1 s manLeu1.NW_012101728v1 40355 63 - 74206 GTGAACCAAAGTGGCTTTGGAGAGA----TGCT---GCTGGATAC-------ATGTACACACACA-ATGTACACTTGC i manLeu1.NW_012101728v1 C 0 I 1 s calJac3.chr2 172063 60 - 204313951 CTGAACCCAGGTGGCTTCGGAGGG-----GGCT---GTTGGATGC-------ATGTGCCATGT---ATGTGGACTTGT i calJac3.chr2 C 0 I 1 s saiBol1.JH378155 134012 55 - 16417988 CGGAACCCAGGTGGCTTCGGAGGGT----TGCT---GTTGGATGC-------ATGTGCC---------GAGGTAATGT i saiBol1.JH378155 C 0 I 1 s cebCap1.NW_016108150v1 236253 63 + 306014 CTGAACCCAGGTGGCTTCGGAGGGT----TGCT---GTTGGATGC-------ATGTGCTGAGGTA-ATGTGGACTTGG i cebCap1.NW_016108150v1 C 0 I 1 s otoGar3.GL873745 61275 57 + 2165740 ATGAATTTGAGTGGCTTCAGATGGA----TGCC-AAGTTAAGTGT-------GTGTACAAATAC--ATGTG------- i otoGar3.GL873745 I 1 C 0 s mm10.chr13 46102521 53 - 120421639 AGGAACCAATGTGGCTT-AGAGGTA----CACTTAAATTAGATAT-------GTATAAGAACACG------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30192539 69 - 42124431 ACAACTCAATGTGCCTTCAGAGGGAAAGCTGTT-AGGGTGGATAC-------ATACAAAGTGTGT-GTGTGTGCGTGC i canFam3.chr34 I 10 I 5 s dasNov3.JH577625 579666 43 + 913073 -----------------------------------atttatatacataaattatatataaatatgtatgtttacatgt i dasNov3.JH577625 C 0 C 0 e aotNan1.NW_018494784v1 96009 62 + 211231 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=340361.000000 s hg38.chr3_KI270779v1_alt 63116 95 + 205312 TATGCTTGTTCACACAAAGGACAGGATGGTCatctg--------------ttcattgaacaactacctgtcgagggccta-tat-gtgccaaagacatcaga-tgaacaaga s gorGor5.CYUI01000576v1 60151 95 + 106623 TATGCTTGTTCACACAAAGGACAGGATGGTCatctg--------------ttcattgaacaactacttgtcgagggccta-tat-gtgccaaagacatcaga-tgaacaaga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231785 95 + 180051392 TATGCTTGTTCACATGAAGGACAGGATGGTCatccg--------------ctcattcaacaaatacttgtcgagggccta-tat-gtgccaaagacATCAGA-TGCACAAGA i rheMac8.chr6 I 1 C 0 s macNem1.NW_012013899v1 55249 95 - 100774 TATGCTTGTTCACATGAAGGACAGGATGGTCatccg--------------ctcattcaacaaatacttgtcgagggccta-tat-gtgccaaagacATCAGA-TGCACAAGA i macNem1.NW_012013899v1 I 1 C 0 s cerAty1.NW_012004452v1 213648 95 + 218577 TATGCTTGTTCACATAAAGGACAGGATGGTCatccg--------------ctcattcaacaaatacttgtcgacggccta-tat-gtgccaAAGACATCAGA-TGCACAAGA i cerAty1.NW_012004452v1 I 1 C 0 s manLeu1.NW_012101728v1 40419 95 - 74206 TATGCTTGTTCACATAAAGGACAGGATGGTCatccg--------------ctcattcaacaaatacttgtcgacggccta-tat-gtgccaaagacATCAGA-TGCACAAGA i manLeu1.NW_012101728v1 I 1 C 0 s calJac3.chr2 172124 94 - 204313951 TATGCTCGTTTACACAAAGGACA-GATGGTCATCTG--------------TTCATC--ACAACACTTTGTCGGAGGCTCT-TATGGTGCTAAAGACTTCAGATTGCAACAAG i calJac3.chr2 I 1 I 919 s saiBol1.JH378155 134068 94 - 16417988 TATGCTCGTTCACACAAAGGACA-GATGATCatctg--------------ttcattgagcaaacacttgtcgagggcctc-tat-gtgctaAAGACATCAGA-TGCACTAGA i saiBol1.JH378155 I 1 C 0 s cebCap1.NW_016108150v1 236317 94 + 306014 CATGCTCGTTCACACAAAGGACA-GATGGTCatctg--------------ttcattcaacaaacactcgtcgagggcctc-tat-gtgctaAAGACATCAGA-TGCACAAGA i cebCap1.NW_016108150v1 I 1 C 0 s aotNan1.NW_018494784v1 96071 94 + 211231 TGTGCTCGTTCACACAAAGGACA-GATGGTCGTCTG--------------ttcattcaacaaacactcgtcgagggcctc-tat-gtgccGAAGACATCAGA-TGCACAAGA i aotNan1.NW_018494784v1 I 62 C 0 s otoGar3.GL873745 61332 81 + 2165740 ------------GACAGAGGACAGGATGGTCACACA--------------GCCTtttaataagtatttgttgagggcctgttat-gtgccaaggacatagga----acaaaa i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46102574 51 - 120421639 CATGCGTCTGTACACATACAAAAAGAT----------------------------------------------------C-TTT-ATGCAAAAGATATGACAATG------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30192613 107 - 42124431 TGCACACATTCACACACACAAAAGAATGGACATATAACTTACTTGGTCATCCCATTTGTTTAACATTTG--AGAGTTCAC-TAT-ATGCCAaagacatacga-tgaacaaga i canFam3.chr34 I 5 C 0 s dasNov3.JH577625 579709 102 + 913073 catatacatttaGA--AAGGGCAGAATAGGCACATAACTGATTTAGTCA-TCCATTTAACAAATATT----GGGGACCTA-TCT-GTGCAAAACACATAAGA-TAAACTTAA i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=98194.000000 s hg38.chr3_KI270779v1_alt 63211 46 + 205312 GGGTGCACTGTGGAAAGCCTCAGGAACACAAGCGCCCAGA-------AACATT s gorGor5.CYUI01000576v1 60246 46 + 106623 GGGTGCACTGTGGAAAGCCtcaggaacacaagcgcccaga-------aacatt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231880 35 + 180051392 GGGTGCACTGT-----------GGAACACACGCGCCCAGA-------AACGCT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55344 35 - 100774 GGGTGCACTGT-----------GGAACACACGCGCCCAGA-------AACGCT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213743 35 + 218577 GGGTGCACTGT-----------GGAACACACGCGCCCAGA-------AACGCT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40514 35 - 74206 GGGTGCACTGT-----------GGAACACACGTGCCCAGA-------AACGCT i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 134162 46 - 16417988 GGGTGCTCTGTGGAAAGCCCCAGGAACACAAGTGCCCAGA-------AACATT i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 236411 45 + 306014 GGGTGCTCTGTGGAAAGCCCCAGG-ACACAAGTGCCCAGA-------AACATT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 96165 45 + 211231 GGGTGCTCTGTGGAAAGCCCAGGA-ACACGAGCGCCCAGA-------AACATT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61413 52 + 2165740 aggtACACTACAGAAAGCATTCAGAACACTAGCACCAGAA-GGAGCCAATGCT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46102625 45 - 120421639 ACTTACCCATT--------TCATGCACCTCAGCTCCCAGAAAGAGCCAATGTT i mm10.chr13 C 0 C 0 s canFam3.chr34 30192720 44 - 42124431 gggtagactat--gaagtgttaggaatgctagcacccaga-------aatagc i canFam3.chr34 C 0 I 6 s dasNov3.JH577625 579811 46 + 913073 GGATGGACTGA----agagttaggaaca---gcacccagaatgaatcaaagtt i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 172218 919 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=59602.000000 s hg38.chr3_KI270779v1_alt 63257 9 + 205312 Tagaaaaat s gorGor5.CYUI01000576v1 60292 9 + 106623 tagaaaaat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231915 9 + 180051392 TAGAAAAAT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55379 9 - 100774 TAGCAAAAT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213778 9 + 218577 Tagaaaaat i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40549 9 - 74206 Tagaaaaat i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 173137 9 - 204313951 Taaaaaaat i calJac3.chr2 I 919 C 0 s saiBol1.JH378155 134208 9 - 16417988 CAGAAAAAT i saiBol1.JH378155 C 0 I 363 s cebCap1.NW_016108150v1 236456 9 + 306014 TAGAAAAAT i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 96210 9 + 211231 TAGAAAAAT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61465 9 + 2165740 TAGAAAAAT i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46102670 9 - 120421639 TAGAAAAGT i mm10.chr13 C 0 C 0 s canFam3.chr34 30192770 9 - 42124431 ttaaaaagt i canFam3.chr34 I 6 C 0 s dasNov3.JH577625 579857 9 + 913073 tacaaaaat i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=14898.000000 s hg38.chr3_KI270779v1_alt 63266 2 + 205312 tc s gorGor5.CYUI01000576v1 60301 2 + 106623 tc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231924 2 + 180051392 TC i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55388 2 - 100774 TC i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213787 2 + 218577 tc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40558 2 - 74206 tc i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 173146 2 - 204313951 tc i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 134580 2 - 16417988 tc i saiBol1.JH378155 I 363 C 0 s cebCap1.NW_016108150v1 236465 2 + 306014 TC i cebCap1.NW_016108150v1 C 0 C 0 s aotNan1.NW_018494784v1 96219 2 + 211231 TC i aotNan1.NW_018494784v1 C 0 I 346 s mm10.chr13 46102679 2 - 120421639 TC i mm10.chr13 C 0 C 0 s canFam3.chr34 30192779 2 - 42124431 tc i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 579866 2 + 913073 tc i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 61474 0 + 2165740 C e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=32862.000000 s hg38.chr3_KI270779v1_alt 63268 5 + 205312 taagg s gorGor5.CYUI01000576v1 60303 5 + 106623 gaagg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231926 5 + 180051392 TAAGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55390 5 - 100774 TAAGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213789 5 + 218577 taagg i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40560 5 - 74206 taagg i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 173148 5 - 204313951 taagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 134582 5 - 16417988 taagg i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 236467 5 + 306014 TAAGG i cebCap1.NW_016108150v1 C 0 I 340 s aotNan1.NW_018494784v1 96567 5 + 211231 taagg i aotNan1.NW_018494784v1 I 346 C 0 s mm10.chr13 46102681 5 - 120421639 TAAAG i mm10.chr13 C 0 I 1 s canFam3.chr34 30192781 5 - 42124431 taagg i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 579868 5 + 913073 taagg i dasNov3.JH577625 C 0 C 0 e otoGar3.GL873745 61474 0 + 2165740 C e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=998667.000000 s hg38.chr3_KI270779v1_alt 63273 208 + 205312 aaaacagaaaaggcatttt-----cagattagctcataga------------aatgagaccaaaggaaagactggccc-agtatttggatacattatgtgataaaccttaacacagggag--gaa---ag------tgttatctttcaattaatttctcaact--------------------------tctggagaccttagaacagacctggctaggaggaaattgaat-c-cgag--gcaggtgagg-----acatagtg----gtgcctcga- s gorGor5.CYUI01000576v1 60308 209 + 106623 aaaacagaaaaggcatttt-----cagattagctcataga------------aatgagaccaaaggaaagactggccccagtatttggatacattatgtgataaaccttaacacagggag--gaa---ag------tgttatctttcaattaatttctcaact--------------------------tctggagagcttagaacagacctaactaggagaaaattgaat-c-cgag--gcagatgagg-----agatagtg----gtgcctcgg- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 231931 200 + 180051392 AAAACAGAAAAGGCATTTT-----CAAATTAG-----AGA------------AATGAGACCACAGTAAAGACTGACCC-AGTATTTGGATCCATTATGTGATTAACCTTAACACAGGGAG--GAA---AG------TGTTCTCTTTCAGTTAATTTCTCCACT--------------------------TCTGGAAAGCTTAGAACAGACCTGGCTAGGAGGAAACGGAAT-C-GGAG--GCAGGTGAG--------ATCGCG----GTGCCTGGA- i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55395 200 - 100774 AAAACAGAAAAGGCATTTT-----AAAATTAG-----AGA------------AATGAGACCACAGTAAAGACTGACCC-AGTATTTGGATCCATTATGTGATTAACCTTAACACAGGGAG--GAA---AG------TGTTCTCTTTCAGTTAATTTCTCCACT--------------------------TCTGGAAAGCTTAGAACAGACCTGGCTAGGAGGAAACGGAAC-C-GGAG--GCAGGTGAG--------ATCGTG----GTGCCTGGA- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213794 200 + 218577 aaaacagaaaaggcatttt-----caaattag-----aga------------aatgagaccacagtaaagactgaccc-agtatttggatacattatgtgattaaccttaacacagggag--gaa---ag------tgttatctttcagttaatttctcaact--------------------------tctggaaagcttagaacagacctggctaggaggaaactgaat-c-cgag--gcaggtgag--------atcgtg----gtgcctgga- i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40565 200 - 74206 aaaacagaaaaggcatttt-----caaattag-----aga------------aatgagaccacagtaaagactgaccc-agtatttggatacattatgtgattaaccttaacacagggag--gaa---ag------tgttatctttcagttaatttctcaact--------------------------tctgggaagcttagaacagacctggctaggaggaaacggaat-c-cgag--gcaggtgag--------atcgtg----gtgcctgga- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 173153 207 - 204313951 gaaacagaaaaggcatttt-----caaattagctcagaga------------aattagacc-aaggaaagactcaccc-agtatttggatacattatgtgattaacgttaacacagggag--gaa---ag------tgatatctttcagttaatttctcaact--------------------------cctggaaagcttagaacagacctggttaggaggaaattgaat-c-cggg--gcaggtgagg-----agaTAGTG----GTACCTCAG- i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 134587 208 - 16417988 aaaacagaaaaggcatttt-----caaattagctcagaga------------aattagaccaaaggaaagactcaccc-agtatttggatacattatgtgattaacattaacacagggag--gaa---ag------tgatatctttcagttaatttctcagct--------------------------cctggaaagcttagaacagacctggttaggaggaaattggat-c-ggag--gcaggtgagg-----agatagtG----GTACCTCGA- i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 236812 208 + 306014 aaaacagaaaaggcatttt-----caaattagctcagaga------------aattagaccaaaggaaagactcaccc-agtatttggatacattatgtgattaacgttaacacagggag--gaa---ac------tgatatctttcagttaatttctcaact--------------------------cctggaaagcttagaacagacctggttaggaggaaattggat-c-tgag--gcaggtgagg-----agatactg----gtacctgga- i cebCap1.NW_016108150v1 I 340 C 0 s aotNan1.NW_018494784v1 96572 208 + 211231 aaagcagaaaaggcattat-----caaattagctcagaga------------aattagaccaaaggaaagactcaccc-agtatttggatacattatgtgattaacgttaacacagggag--gaa---ag------tgatatctttcagttaatttctcaact--------------------------cctggaaagcttagaacagacctggttaggaggaaactgaat-c-cgag--gcaggtgagg-----agatcgtg----gtacctcga- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61474 198 + 2165740 --------------ATTTT-----CAAACTAGCTCAGGGA------------AATTAGACCAAAGGAAAGACTGGCCC-AGTATTTGGATATATGATGTGATTGATGTTAATGTAGGGAGCACAG---AG------TGTTATCTTTCAGTTAATTTCTTGACT--------------------------Cccagaaagtgtggaacagaactagtttggaggaaattgaat-c-caagatataagcaaga-----agatagtg----gcacctcaa- i otoGar3.GL873745 C 0 C 0 s mm10.chr13 46102687 212 - 120421639 AAAACA--------ATTTTGTGTATATAGTAGCTCAAAGAAGTAGCTCAGAGAATTAGGTTAAAGGAAAGAGTGGCCC-AATATGCAGACACATGATATGATTAACATCA----TAGGAG--GAC---AG------GGTTATCTC---ATTTATTTCTCTact-----------------------------ggaaagcttagaacagacctggttaagaggaaactaaac-c-tgag--atagggcaaggagatagatggtg----gcacctggA- i mm10.chr13 I 1 N 0 s canFam3.chr34 30192786 204 - 42124431 --gtaataaaaggcatttt-----ccaactgg-------------------------------------------ccc-aacat-tagatacattatgtg-ctaacgttaatgggaggaa--gagagcag------tgttgtctttcagtttatttctctcctctcccatccaggagcaccatct---acttggaaagcttagaacagacctggttaagagggaactgaatcc-caag--ataggcgagg-----ggatagtggcaagtacattaa- i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 579873 236 + 913073 aaaataacaga---atttt-----caaattagctcagaga------------aatgagacgaaaagaaaaactgaccc-aatatttggatacattgtgtatttaatgttaatgtaggaaa--gaa---agcagaactgtcaacgtttagtttatttcttgact---atatacaggagcatgatcttcaaaatggaaagtttagaacaaccctggctaggagggagttgaat-cgtgcg--acaggtgagg-----agatgggc----gagcacccac i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=703065.000000 s hg38.chr3_KI270779v1_alt 63481 214 + 205312 tgcttccagtgattgcgtcagcagaaccagGGGTGGGAGATGATC--TCTCTTTTTGTTGGC-AGATGGTGGTGTCTGCTGTAGCTTTG-TCCCCT---------GGTGACGGGACTC-AGGCAGTAAC--CCCCATCATTGGCAATACCCCCACC--TCTGAGAATGTGGAGAGGACTT-GTGAAGACAATGTTGTCCCAA-GCAGCACAG-----------CCCAGGTGCT-----------GACAGG----ATTCAG s gorGor5.CYUI01000576v1 60517 213 + 106623 tgcttccagtgattgcgtcagcagaaccagGGGTGGGAGATGATC--TCTCTTTTTGTTGGC-AGATGGTGGTCTCTGCTGTAGCTTTG-TCCC-T---------GGTGACGGGACTC-AGGCAGCATC--CCCCATCATTGGCAATACCCCCACC--TCTGAGAATGTGGAGAGGACTT-GTGAAGACAATGTTGTCCCAA-GCAGCACAG-----------CCCAGGTGCT-----------GACAGG----ATTCAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232131 212 + 180051392 TGCTTCCAGTGATTGGGTCAGCAGAACCAGGGGTGGGAGATGGTC--TCTCTTTTTGTTGGC-AGATGGTGGTCTCCGCTGTAGCTTTG-TCCC-T---------GGTGACGGGACTC-AGGCAGCATC--CCCCATCAATGGCAAAACCCCCGCC--TCTGAGAATGTGGAGAGCACTT-GTGAAGACAATGTTGTCCCAC--CAGCACGG-----------CCCATGTGCT-----------GACAGG----ATTCAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55595 212 - 100774 TGCTTCCAGCGATTGGGTCAGCAGAACCAGGGGTGGGAGATGGTC--TCTCTTTTTGTTGGC-AGATGGTGGTCTCCGCTGTGGCTTTG-TCCC-T---------GGTGACGGGACTC-AGGCAGCATC--CCCCATCAATGGCAAAACCCCCGCC--TCTGAGAATGTGGAGAGCACTT-GTGAAGGCAATGTTGTCCCAC--CAGCACAG-----------CCCACGTGCT-----------GACAGG----ATTCAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 213994 213 + 218577 tgcttccagtgattgggtcagcagaaccagGGGTGGGAGATGATC--TCTCTTTTTGTTGGC-AGATGGTGGTCTCCGCTGTAGCTTTG-TCCC-T---------GGTGACGGGACTC-AGGCAGCATC--CCCCATCAATGGCAAAACCCCCGCC--TCTGAGAATGTGGAGAGGACTT-GTGAAGACAATGTTGTCCCAC-GCAGCACAG-----------CCCAGGTGCT-----------GACAGG----ATTCAG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40765 213 - 74206 tgcttccagtgattgggtcagcagaaccagGGGTGGGAGATGATC--TCTCTTTTTGTTGGC-AGATGGTGGTCTCCGCTGTAGCTTTG-TCCC-T---------GGTGATGGGACTC-AGGCAGCATC--CCCCATCAATGGCAAAACCCCCGCC--TCTGAGAATGTGGAGAGGACTT-GTGAAGACAATGTTGTCCCAC-GCAGCACAG-----------CCCAGGTGCT-----------GACAGG----ATTCAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 173360 210 - 204313951 TGC-TCCAGTGATTCAGTCTGCAGAACCAGGGCTGGGAGGTGA------GCTTTTTGTTGGC-AGATGGTGGTTTCCGCTGCAGCCTCGCCCCC-T---------GGGGACAGGACTC-AGGCAGAATC--CCCCATCAGTGGCAGTACCCCCACC--TTTGAGAATGTGGAGAGGACTTGGGGAAGAAAGTGTTGTCCCAC-ACAGCACAG-----------CCCAGGTGCC-----------AACAGG----ATTCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 134795 190 - 16417988 TGC-TCCAGTGACTCCATCAACAGAACCAGGGCTGGGAGGTGA------GCTTTTTGTTGGC-A---GGTGGTTTCCGCTGTAGCCTTG-CCCG-T---------GGGGACAGGACTC-------------------CAGTGGCAGTACCCCCACC--TCTGAGAATGTGGAGAGGACTCGGACAGGACAGCGTTGTGCCAT-GCAGCACAG-----------CCCAGGCGCT-----------GACAGG----ATTCAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 237020 206 + 306014 tgc-tccagtgattccgtcagcagaaccagGGCTGGGAGGTGA------GCTTTTTGTTGGC-A---GGTGGTTTCCGCTGTAGCCTTGCCCCC-T---------GGAGACAGGACTC-AGGCAGCA-C--CCCCATCAGTGGCAGCACCCTCACC--TCTGAGAATGTGGAGAAGACTTGGGGAAGACAGTGCCGTCCCAT-GCAGCACAG-----------CCCAGGCGCT-----------GACAGG----ATTCAG i cebCap1.NW_016108150v1 C 0 I 56 s aotNan1.NW_018494784v1 96780 210 + 211231 tgc-tccagtgattcagtcagcagaaccagGGCTGGGAGGTGA------GCGTTTTGTTGGC-AGACGGTGGTTTCCGCTGTAGCCTTGCCCCC-T---------GGGGACAGGACTC-AGGCAGCGTC--CCCCATCAGTGGCAGCAGCCCCACC--TCTGAGAGTGTGGAGAGGACTCAGGGAAGACAGTGCTGTCCCAC-GCAGCACAG-----------CCCAGGCGCT-----------GACAGG----ATGCAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61672 171 + 2165740 cgcttcatttagttgattcagcag--ccagagcc---agatgaCC--TGCCTTTCTGGCGGT-CTCCATTGTACCTTCCTGCACCTTTG-TAGG-T---------GGTGACAGGACCC-AGGCA------------------------------------CAAAACTATGGAGAGGACTC-------ATAAGGTTGTCCCCTAGCACCATAA-----------CCCAAAAGCC-----------AACAGG----ATGAAG i otoGar3.GL873745 C 0 I 6 s canFam3.chr34 30192990 227 - 42124431 tactttaagtgattgagtctgtagaactaggcAGGGGCTAGGCTG--CATCTTTCTGCTGGCGAGGAGACGGTCTCCCCTGTGGCTGCG-CATC-TCTGCCATGAGGCCACAGGACTCCAGGCAACACCGTCCCCACCAATGGCAGCAATTC---------------ACTGAGAGGACCC--CAAGGCTTAGGCCTGCCCTA-GCAGTATGG-----------CCCAGGTGCTGTGCCCCACCCGACCTGTTCCATGCAG i canFam3.chr34 C 0 I 8 s dasNov3.JH577625 580109 232 + 913073 agctttacaggaCTGAGTCA--ATGAGCAGGGGAGGGAGATGCTCCGCCTCTTTCTGCTGGC-ATGTGCTGCTCTCTGCCATCTCTGCA-CGTC-TTTGTAAGGTGGCAACAGGACCC----CAGAAGG--TCACATCAGTGGCAACACACCCCCCATTCAAGGACCACAGAAAGGACTCAGATATGTTCATCATGGCAGAC--CAGCACGGGGCCAGTTTTCCTTTGGGGAT-----------GAGCTG----ACCCAG i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=49679.000000 s hg38.chr3_KI270779v1_alt 63695 16 + 205312 AGTTAGAGCT-----TTCTTA s gorGor5.CYUI01000576v1 60730 16 + 106623 AGTTAGAGCT-----TTCTTA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232343 16 + 180051392 AGCTAGAGGT-----TTCTTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55807 16 - 100774 AGCTGGAGGT-----TTCTTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214207 16 + 218577 AGCTAGAGGT-----TTCTTA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40978 16 - 74206 AGCTAGAGGT-----TTCTTA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 173570 16 - 204313951 GGCTGGAGGC-----TCCTTA i calJac3.chr2 C 0 I 420 s saiBol1.JH378155 134985 16 - 16417988 GGCTGGGGGC-----TCCTTC i saiBol1.JH378155 C 0 I 2 s aotNan1.NW_018494784v1 96990 16 + 211231 GGCTGGAGGC-----TCCTTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61849 16 + 2165740 AGCTAGAGAT-----TCCTTA i otoGar3.GL873745 I 6 C 0 s canFam3.chr34 30193225 16 - 42124431 AGCCAGTGGC-----TCATTA i canFam3.chr34 I 8 C 0 s dasNov3.JH577625 580341 18 + 913073 ---CAGCAGTGCTCATGCTCA i dasNov3.JH577625 C 0 I 5 e cebCap1.NW_016108150v1 237226 56 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=17146.000000 s hg38.chr3_KI270779v1_alt 63711 10 + 205312 GAGGTCAGGG s gorGor5.CYUI01000576v1 60746 10 + 106623 GAGGTCAGGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232359 10 + 180051392 GAGGGCAGGG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55823 10 - 100774 GAGGGCAGGG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214223 10 + 218577 GAGGGCAGGG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 40994 10 - 74206 GAGGGCAGGG i manLeu1.NW_012101728v1 C 0 C 0 s saiBol1.JH378155 135003 5 - 16417988 ---GTCGG-- i saiBol1.JH378155 I 2 C 0 s aotNan1.NW_018494784v1 97006 7 + 211231 -CGGCCGG-- i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61865 10 + 2165740 GAGATCATGG i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30193241 10 - 42124431 GAAATCAGGG i canFam3.chr34 C 0 C 0 s dasNov3.JH577625 580364 10 + 913073 GAAGCTAGGG i dasNov3.JH577625 I 5 C 0 e cebCap1.NW_016108150v1 237226 56 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e calJac3.chr2 173586 420 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=91227.000000 s hg38.chr3_KI270779v1_alt 63721 33 + 205312 TTGCGGAAGAGGCAGGGACTGCAGCTGCATAGT s gorGor5.CYUI01000576v1 60756 33 + 106623 TTGCAGAAGAGGCAGGGACTGCAGCTGCATAGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232369 33 + 180051392 TTGCGGAAGAGGCGTGGACTGCAGCTGCATAGT i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55833 33 - 100774 TTGCGGGAGAGGCGTGGACTGCAGCTGCATAGT i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214233 33 + 218577 TTGCGGAAGAGGCGTGGACTGCAGCTGCATAGT i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41004 33 - 74206 TTGCGGAAGAGGCGTGGACTGCAGCTGCATAGT i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 174006 31 - 204313951 TTGCGGAAAAGGCAGGGACTGCAGCTGC--GGT i calJac3.chr2 I 420 C 0 s saiBol1.JH378155 135008 32 - 16417988 TTACGGAAAAGGCA-GGACGGCAGCTGCGTGGG i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 97013 33 + 211231 TTGCGGAAAAGGCAGGGACTGCAGCTGCGTGGT i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61875 31 + 2165740 TTGCAGTAAAGGAAAGGCCTGAAGCTGC--AGT i otoGar3.GL873745 C 0 C 0 s canFam3.chr34 30193251 33 - 42124431 CTGAgggatccctgggtggcgcagcggtttagt i canFam3.chr34 C 0 N 0 s dasNov3.JH577625 580374 27 + 913073 GTTCCTGAGAGGTAAGCCAGTCAGCTG------ i dasNov3.JH577625 C 0 C 0 e cebCap1.NW_016108150v1 237226 56 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=23599.000000 s hg38.chr3_KI270779v1_alt 63754 7 + 205312 TTGTATA s gorGor5.CYUI01000576v1 60789 7 + 106623 TTGTATA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232402 7 + 180051392 TGGTGTA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55866 7 - 100774 TTGTGTA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214266 7 + 218577 TTGTGTA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41037 7 - 74206 TTGTGTA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 174037 7 - 204313951 TTGTGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 135040 7 - 16417988 TTGTGTA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 97046 7 + 211231 TTGTGTA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61906 7 + 2165740 TTGTGAA i otoGar3.GL873745 C 0 C 0 e dasNov3.JH577625 580401 0 + 913073 C e cebCap1.NW_016108150v1 237226 56 + 306014 I e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=232458.000000 s hg38.chr3_KI270779v1_alt 63761 55 + 205312 TGTATCAGGCTAGTATCTTTTG---TTCTAGACTCATCCATTTGTACATTCATATGAG s gorGor5.CYUI01000576v1 60796 55 + 106623 TGTATCAGGCTAGTATCTTTTG---TTCTAGACTCATCCATTTGTACATTCATATGAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232409 55 + 180051392 TATATCAGGCCAGTATCTCTTG---TTCTAGACACATCCATTTGTGCATTCGTATGAG i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55873 55 - 100774 TATATCAGGCCAGTATCTCTTG---TTCTAGACACATCCATTTGTGCATTCGTATGAG i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214273 55 + 218577 TATATCAGGCCAGTATCTCTTG---TTCTAGGCACATCCATTTGTGCATTCGTATGAG i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41044 55 - 74206 TATATCAGGCCAGTATCTCTTG---TTCTAGGCACATCCATTTGTGCATTCGTATGAG i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 174044 55 - 204313951 TGTATCAGGCCAGTATTTCTTG---TTCTAGACTCGCCCATTTGGACATTGACATGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 135047 55 - 16417988 TGTATCAGGCCAGTATCTCTTG---TTCTAGACTCACCCATTTGGACATTGACATGAG i saiBol1.JH378155 C 0 C 0 s cebCap1.NW_016108150v1 237282 55 + 306014 TGTATCAGGCCAGTATCTCTTG---TTCTAGACTCGCCCATTTGGACATTGACATGAG i cebCap1.NW_016108150v1 I 56 N 0 s aotNan1.NW_018494784v1 97053 55 + 211231 TGTATGAGGCCAGTATCTCTTG---TTCTAGACTCGCCCATTTGAACATTGACATGAG i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61913 58 + 2165740 TGTATCAGGCCAGTATCTTTTGTTTTTCTAGACTCAATTATCTCTACGTTCAGATGGG i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 580401 50 + 913073 --GGGCAGGCCAATCTCTCACC---TCCTAAATTCGTCCATTTATACGTTTATAT--- i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=30530.000000 s hg38.chr3_KI270779v1_alt 63816 10 + 205312 TATGCATGCA s gorGor5.CYUI01000576v1 60851 10 + 106623 TATGCATGCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232464 10 + 180051392 TATGCACGCA i rheMac8.chr6 C 0 C 0 s macNem1.NW_012013899v1 55928 10 - 100774 TATGCACGCA i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214328 10 + 218577 TATGCACGCA i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41099 10 - 74206 TATGCACGCA i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 174099 10 - 204313951 TGTGCATGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378155 135102 10 - 16417988 GGTGCATGCA i saiBol1.JH378155 C 0 C 0 s aotNan1.NW_018494784v1 97108 10 + 211231 TGCGCATGCA i aotNan1.NW_018494784v1 C 0 C 0 s otoGar3.GL873745 61971 10 + 2165740 CAGGTATGCA i otoGar3.GL873745 C 0 C 0 s dasNov3.JH577625 580451 5 + 913073 -----ATGTG i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=4500.000000 s hg38.chr3_KI270779v1_alt 63826 11 + 205312 --TGGTGTttt---tt s gorGor5.CYUI01000576v1 60861 11 + 106623 --TGGTGTttt---tt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr6 232474 9 + 180051392 --GGGTGtttt----- i rheMac8.chr6 C 0 N 0 s macFas5.chr2 10318 12 + 192460366 --gtgtgtctccat-- i macFas5.chr2 N 0 I 1 s macNem1.NW_012013899v1 55938 5 - 100774 --GGGTG--------- i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214338 9 + 218577 --GAGTGtttt----- i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41109 9 - 74206 --GAGTGtttt----- i manLeu1.NW_012101728v1 C 0 C 0 s calJac3.chr2 174109 9 - 204313951 --CGGTGTTTT----- i calJac3.chr2 C 0 I 2 s saiBol1.JH378155 135112 9 - 16417988 --GGGTGTTCT----- i saiBol1.JH378155 C 0 N 0 s aotNan1.NW_018494784v1 97118 9 + 211231 --GGGTGTTCT----- i aotNan1.NW_018494784v1 C 0 N 0 s otoGar3.GL873745 61981 8 + 2165740 ---GTTGCTTT----- i otoGar3.GL873745 C 0 I 2 s dasNov3.JH577625 580456 11 + 913073 GGGGATTTTTT----- i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=92.000000 s hg38.chr3_KI270779v1_alt 63837 3 + 205312 -ctt s gorGor5.CYUI01000576v1 60872 3 + 106623 -ctt i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr2 174120 3 - 204313951 -TTT i calJac3.chr2 I 2 N 0 s otoGar3.GL873745 61991 3 + 2165740 -CTT i otoGar3.GL873745 I 2 C 0 s dasNov3.JH577625 580467 3 + 913073 TCT- i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012013899v1 55943 0 - 100774 C e manLeu1.NW_012101728v1 41118 0 - 74206 C e cerAty1.NW_012004452v1 214347 0 + 218577 C e macFas5.chr2 10330 1 + 192460366 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=3276.000000 s hg38.chr3_KI270779v1_alt 63840 1 + 205312 t s gorGor5.CYUI01000576v1 60875 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403613 1 + 204787373 t i rheMac8.chr2 N 0 C 0 s macFas5.chr2 10331 1 + 192460366 t i macFas5.chr2 I 1 C 0 s macNem1.NW_012013899v1 55943 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214347 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41118 1 - 74206 t i manLeu1.NW_012101728v1 C 0 C 0 s otoGar3.GL873745 61994 1 + 2165740 T i otoGar3.GL873745 C 0 N 0 s dasNov3.JH577625 580470 1 + 913073 T i dasNov3.JH577625 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=2548.000000 s hg38.chr3_KI270779v1_alt 63841 1 + 205312 t s gorGor5.CYUI01000576v1 60876 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403614 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10332 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55944 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214348 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41119 1 - 74206 t i manLeu1.NW_012101728v1 C 0 C 0 s dasNov3.JH577625 580471 1 + 913073 T i dasNov3.JH577625 C 0 N 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=2412.000000 s hg38.chr3_KI270779v1_alt 63842 2 + 205312 tc s gorGor5.CYUI01000576v1 60877 2 + 106623 tc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403615 2 + 204787373 tt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10333 2 + 192460366 tt i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55945 2 - 100774 tt i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214349 2 + 218577 tc i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41120 2 - 74206 tc i manLeu1.NW_012101728v1 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=2548.000000 s hg38.chr3_KI270779v1_alt 63844 1 + 205312 t s gorGor5.CYUI01000576v1 60879 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403617 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10335 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55947 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214351 1 + 218577 t i cerAty1.NW_012004452v1 C 0 C 0 s manLeu1.NW_012101728v1 41122 1 - 74206 t i manLeu1.NW_012101728v1 C 0 N 0 s colAng1.NW_012118932v1 395108 1 + 7796314 t i colAng1.NW_012118932v1 N 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=2548.000000 s hg38.chr3_KI270779v1_alt 63845 1 + 205312 t s gorGor5.CYUI01000576v1 60880 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403618 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10336 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55948 1 - 100774 t i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004452v1 214352 1 + 218577 t i cerAty1.NW_012004452v1 C 0 N 0 s manLeu1.NW_012102020v1 510603 1 - 1977891 t i manLeu1.NW_012102020v1 N 0 C 0 s colAng1.NW_012118932v1 395109 1 + 7796314 t i colAng1.NW_012118932v1 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=3090.000000 s hg38.chr3_KI270779v1_alt 63846 2 + 205312 tt s gorGor5.CYUI01000576v1 60881 2 + 106623 tt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403619 2 + 204787373 tt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10337 2 + 192460366 tt i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55949 2 - 100774 tc i macNem1.NW_012013899v1 C 0 C 0 s manLeu1.NW_012102020v1 510604 2 - 1977891 tt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395110 2 + 7796314 tt i colAng1.NW_012118932v1 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=15179.000000 s hg38.chr3_KI270779v1_alt 63848 7 + 205312 tcttttt s gorGor5.CYUI01000576v1 60883 7 + 106623 tcttttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403621 7 + 204787373 ttttttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10339 7 + 192460366 ttttttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55951 7 - 100774 ttttttc i macNem1.NW_012013899v1 C 0 C 0 s cerAty1.NW_012004056v1 418038 7 + 16847902 tcttttt i cerAty1.NW_012004056v1 N 0 C 0 s manLeu1.NW_012102020v1 510606 7 - 1977891 ttttttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395112 7 + 7796314 ttttttt i colAng1.NW_012118932v1 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=302978.000000 s hg38.chr3_KI270779v1_alt 63855 117 + 205312 ttttttttttttgagatggagtcttgctgtgtcacccaggctggagtgcagtggcataatcttgcttgactgcaagctccgcattccgggttcaagagattctcctgcctcagcctt s gorGor5.CYUI01000576v1 60890 114 + 106623 tttttttttt--gagatggagtcttgctgtgtcacccaggctggagtgcagtagcataatcttgcttgactgcaggctccgcattccaggttcaagagattctcctgc-tcagcctt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403628 117 + 204787373 ttttttttttttgagatggagtctcactctgtcacccaggctggagagcagtggtgcggtcttggctcactacaacctcctcctcccgggttcaagagattctgctgcctcagcctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10346 117 + 192460366 ttttttttttttgagacggagtctcactctgtcacccaggctggagagcagtggtgcggtcttggctcactacaacctcctcctcccgggttcaagagattctgctgcctcagcctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012013899v1 55958 117 - 100774 cttttctttttggagatggagtctcgctctgtcagggaggctggagtccagtggcgccatcttggctcactgcaagctccgcctcccaggttcccgccactctcctgcctcggcctt i macNem1.NW_012013899v1 C 0 N 0 s cerAty1.NW_012004056v1 418045 117 + 16847902 ttttttttttttgagatggactctcactctgtcacccaggctggagagcagtggtgcggtcttggctcactacaacctcctcctcccgggttcaagagattctcctgcctcagcctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 359878 117 - 91754291 ttttttttttttgagatggactctcactctgtcacccaggctagagagcagtggtgcgatcttggctcactacaacctcctcctcccgggttcaagagattctcctgcctcagactt i chlSab2.chr15 N 0 C 0 s manLeu1.NW_012102020v1 510613 117 - 1977891 gtttttttttttgagatggactctcactctgtcacccaggctggagagcagtggtgcggtcttggctcactacaacctcctcctcccgggttcaagagattctcctgcctcagcctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395119 116 + 7796314 ttttttttttttgagatggactctcgctctgtcacccaggctggagagcagtggtgcgatctcggctcactacaacctcctcct-ccgggttcaagagattctcctgcctcagactt i colAng1.NW_012118932v1 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=505255.000000 s hg38.chr3_KI270779v1_alt 63972 178 + 205312 ccgagtagctgggattacagg-tg-cctgccaccacacttggctaatttttgtattttta--gtagagatgggggtttcaccatgttggccaggctgg-tgtcgaactcctgacctca-gtgatccacctgccttggc-ctcccaaagtgctg-ggatt--acaggcattagccactgcgcccagccG s gorGor5.CYUI01000576v1 61004 178 + 106623 ccgagtagctgggattacagg-tggcctgccaccacacttggctaatttttgtattttta--gtagagatgggg-tttcaccatgttgggcaggctgg-tctcgaactcctgacctca-gtgatccacctgccttggc-ctcccaaagtgctg-ggatt--acaggcgtgagccactgcgcccagccA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403745 176 + 204787373 ccgagaagctgggactacagg-cg--ccgccaccacacccggctaagttttgtattttta--gtagagacgggg-tttcaccatgttggccaggctgg-tctcaaactcctgacctcaggtgatccacccgcctcggc-ctcccaa-gtgctg-cgatt--acaggcgtgagccaccgcgcccagcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10463 176 + 192460366 ccgagaagctgggactacagg-cg--ccgccaccacacccggctaagttttgtattttta--gtagagacgggg-tttcaccatgttggccaggctgg-tctcaaactcctgacctcaggtgatccacccgcctcggc-ctcccaa-gtgctg-cgatt--acaggcgtgagccacggcgcccagcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 486381 185 + 19675229 ccgagaagctgggactacaggtcg--ccgccaccacacccggctaagttttgtatttttattgtagagacgggg-tttcaccatgttggccaggctggttctcaaactcctgacctcaggtgatccacccgcctcggctctcccaaggtgctgccgatttaactggcgtgcgccaccgcgcccagccA i macNem1.NW_012014355v1 N 0 C 0 s cerAty1.NW_012004056v1 418162 176 + 16847902 ctgagaagctgggactacagg-cg--ccgccaccacacccggctaagttttgtattttta--gtagagacgggg-tttcaccatgttggccaggctgg-tctcaaactcccgacctcaggtgatccacccgcctcggc-ctcccaa-gtgctg-cgatt--acaggcgtgggccaccgcgcccagcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 359995 177 - 91754291 ccgagaagctgggattacagg-ca-cccgccaccacacccggctaatttttgtattttta--gtagagacgggg-tttcaccatgttggccaggctgg-tctcaaactcctgacctcaggtgatccacccgcctcggc-ctcccaa-gtgctg-cgatt--acaggcgtgagccactgcgcccagcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 510730 176 - 1977891 ctgagaagctgggactacagg-cg--ccgccaccacacccagctaagttttgtattttta--gtagagacgggg-tttcaccatgttggccaggatgg-tctcaaactcccgacctcaggtgatccacccgcctcggc-ctcccaa-gtgctg-cgatt--acaggcgtgagccaccgcgcccagcca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395235 177 + 7796314 ccgagaagctgggattacagg-cg-cctgccaccacacccggctaatttttgtattttta--gtagagacgggg-tttcagcatgttggccaggctgc-tctcaaactcctgacctcaggtgatccacccgcctcggc-ctcccaa-gtgctg-ggatt--acaggcgtgagccaccgcgcccggccA i colAng1.NW_012118932v1 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=14940.000000 s hg38.chr3_KI270779v1_alt 64150 4 + 205312 TATG s gorGor5.CYUI01000576v1 61182 4 + 106623 TATG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403921 4 + 204787373 tagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10639 4 + 192460366 tatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 486566 4 + 19675229 TATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 418338 4 + 16847902 tatg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360172 4 - 91754291 tatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 510906 4 - 1977891 tatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395412 4 + 7796314 TATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 849686 4 - 74750902 tatg i calJac3.chr17 N 0 I 4 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=115870.000000 s hg38.chr3_KI270779v1_alt 64154 25 + 205312 TCTCCATCTTTTTATTTCTTGCAAT s gorGor5.CYUI01000576v1 61186 25 + 106623 TCTCCATCTTTTTATTTCTTGCAAT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403925 25 + 204787373 tctccatctttttatttcttgcaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10643 25 + 192460366 tctccatctttttatttcttgcaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 486570 25 + 19675229 TCTCCATTCTTTTTATTCTTGCAAT i macNem1.NW_012014355v1 C 0 I 75 s cerAty1.NW_012004056v1 418342 25 + 16847902 tctccatctttttatttcttgcaat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360176 25 - 91754291 cctccatctttttatttcttgcaat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 510910 25 - 1977891 tctccatctttttatttcttgcaat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395416 25 + 7796314 Tctccatctttttatttcttgcaat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 849694 25 - 74750902 tgtccgtctttttatttCTTGCAAT i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 393158 25 + 17725628 tctccatctttttatttcttgcgat i saiBol1.JH378146 N 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=98166.000000 s hg38.chr3_KI270779v1_alt 64179 27 + 205312 GTGTTGTTAAAGAAGTCAGGTGGTATG s gorGor5.CYUI01000576v1 61211 27 + 106623 GTGTTGTTAAAGAAGTCAGGTGGTATG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202403950 27 + 204787373 gtattgttaaagaaatcaagtagtatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10668 27 + 192460366 gtattgttaaagaaatcaagtagtatg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 418367 27 + 16847902 gtattgttaaagaaatcaagtagtatg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360201 27 - 91754291 gtattgtaaaagaaatcaggtagtatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 510935 27 - 1977891 gtattgttaaagaaatcaagtagtatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395441 27 + 7796314 gtattgtcaaagaaatcaggtagtatg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 849719 27 - 74750902 GTGTCGTTAAAGAAATCAGGTGGTGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 393183 27 + 17725628 gtattgttaaagaaatcaggtggtatg i saiBol1.JH378146 C 0 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012014355v1 486595 75 + 19675229 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=135114.000000 s hg38.chr3_KI270779v1_alt 64206 41 + 205312 TGTACACAAGT-------AACGTATACTTGTT-GAATATTTCTTATTTA s gorGor5.CYUI01000576v1 61238 41 + 106623 TGTACACAAGT-------AACATATACTTGTT-GAATATTTCttattta i gorGor5.CYUI01000576v1 C 0 I 1 s rheMac8.chr2 202403977 41 + 204787373 tGTACACAAAT-------AATGTTCAGTTATT-GAGTATTTCTTTTTTA i rheMac8.chr2 C 0 I 1 s macFas5.chr2 10695 41 + 192460366 tGTACACAAAT-------AATGTTCAGTTATT-GAGTATTTCTTTTTTA i macFas5.chr2 C 0 I 1 s cerAty1.NW_012004056v1 418394 41 + 16847902 tGTACACAAAT-------AATGTTCAGTTATT-GAGTATTTCTTTTTTA i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 360228 41 - 91754291 tGTACACAAAT-------AACGTTCAGTTATT-GAGTATTTCTTTTTTA i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 510962 41 - 1977891 tGTACACAAAT-------AATGTTCAGTTATT-GAGTATTTCTTTTTTA i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 395468 33 + 7796314 tGTACACAAAT-------AACGTTC---------AGTATTTCTTTTTTA i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 849746 41 - 74750902 TGTACGCAAAT-------AACATGCAATTATT-GAGTACTTCttgttta i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 393210 41 + 17725628 tGTACACAAAT-------AACATGCAACTATT-GAGTATTTCTTGTTTG i saiBol1.JH378146 C 0 I 1 s dasNov3.JH569502 3840231 49 + 6579706 TGTACACAGATATATGTAAATATACAGTTATTCTGATATTCttttttta i dasNov3.JH569502 N 0 I 1 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e macNem1.NW_012014355v1 486595 75 + 19675229 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=309944.000000 s hg38.chr3_KI270779v1_alt 64247 67 + 205312 TCATACCCTGT-CTCGTTCCAAA-AGGATTTTACATGACTTATAATTTTAAtataatccgggg-------------gagat-g s gorGor5.CYUI01000576v1 61280 67 + 106623 tcataccctgt-ctcgttccaaa-aggattttaaatgacttataaTTTTAAtataatccgggg-------------aagat-g i gorGor5.CYUI01000576v1 I 1 C 0 s rheMac8.chr2 202404019 79 + 204787373 TCATACCCTGT-CTTGTTCCAAA-AGGATTTTAAATGACTTataattttaatataatccagggaggg-gtaagcgtgagat-g i rheMac8.chr2 I 1 C 0 s macFas5.chr2 10737 79 + 192460366 TCATACCCTGT-CTTGTTCCAAA-AGGATTTTAAATGACTTATAATTTTAATATAATCCGGGGAGGG-GTAAGCGTGAGAT-G i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 486670 81 + 19675229 TCATACCCTGTCCTTGTTCCAAA-AGGATTTTAAATGACTTATAATTTTAATATGATCCGGTGGAGG-GTAAGCGTGAGATGG i macNem1.NW_012014355v1 I 75 C 0 s cerAty1.NW_012004056v1 418436 79 + 16847902 TCATACCCTGT-CTTGTTCCAAA-AGGATTTTAAATGACTTATAATTTTAAGATAATCCGGGGAGGG-GTAAGCGTGAGAT-G i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 360270 79 - 91754291 TCATACCCTGT-CTTGTTCCAAA-AGGATTTTAAATGACTTATAATTTTAATGTAATCCGGGGAGGG-GTAGGCGTGAGAT-G i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 511004 79 - 1977891 TCATACCCTGT-CTTGTTCCAAA-AGGATTTTAAATGACTTATAATTTTAAGATAATCCGGGGAGGG-GTAAGCGTGAGAT-G i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 395502 79 + 7796314 TCATACCCTGT-CTTGTTCCAAA-AGGATTTTAAATGACTTATAATTTTAATATAATCCGGGGAGGG-GCAAGCGTGAGAT-G i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 849788 67 - 74750902 tcgtaccctgt-cttgtgccaaa-aagatttaaaatgacttatgatattaatataatctgggaggggtg-------------- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 393252 64 + 17725628 TCATATC--GT-CTTGTACCAAA-AGGATTTAAAATGACTTGTGATATTAATATAATCTGGGGAGGG-G-------------- i saiBol1.JH378146 I 1 C 0 s dasNov3.JH569502 3840281 80 + 6579706 tcctaccctgc-cttgttccaaataggatttaaagtggcctataaTTTTCATATAATCTGGAGAGGG-ATAAACGTCAAGT-G i dasNov3.JH569502 I 1 C 0 e panPan2.chrUn_NW_014024201v1 30650 12 + 190779 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro5.chr3 200049037 12 + 202621043 I a score=1954008.000000 s hg38.chr3_KI270779v1_alt 64314 337 + 205312 ggcagattc-agctctgggaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttcttgaaagatatttgaggtaaatcttacaggattagaggttagccagatgaaaagaAATC--AAGAGAGGAGAGAGGA-G-CCCCCACAAAGGACTGACCCAGGGCAATAAC----G-GG-----GAAA-------------------------GAA--CTTGGAGGTACAG-AGGCAGACCTTGGTGTTTCCCAGGGTGTGGGACGTTGGGGGTAGTAAGGCT-GGAGTGGGTAGAGGAAAGGGCTAGGGTGACA-CCACGGGGTATTAGGTGGAACTGagggaaacagaaataggagcagagaaaagggaatg s panTro5.chr3 200049049 339 + 202621043 GGCAGATTC-Agctctggcaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttcttgaaagatatttgaggtaaatcttacaggattagaggttagccagatgaaaagaAATC--AAGAGAGGAGAGAGGA-G-CCCCCACAAAGGACTGACCCAGGGCAATAACA--GG-GG-----GAAA-------------------------GAA--CTTGGAGGTACAG-AGGCAGACCTTGGTGTTTCCCAGGGTGTGGGACGTTGCGGGTAGTAAGGCT-GGAGTGGGTAGAGGAAAGGGCTAGGGTGACA-CCACGGGGTATTAGGTGGAACTGagggaaacagaaataggaccagagaaaagggaatg i panTro5.chr3 I 12 C 0 s panPan2.chrUn_NW_014024201v1 30662 339 + 190779 GGCAGATTC-Agctctgggaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttcttgaaagatatttgaggtaaatcttacaggattagaggttagccagatgaaaagaaatc--aagagaggagagagga-g-cccccacaaaggactgacccagggcaataaca--gg-gg-----gaaa-------------------------gaa--cttggaggtacag-aggcagaccttggtgtttcccagggtgtgggacgttgggggtagtaaggct-ggagtgggtagaggaaagggctggggTGACA-CCACGGGGTATTAGGTGGAACTGagggaaacagaaataggagcagagaaaagggaatg i panPan2.chrUn_NW_014024201v1 I 12 C 0 s gorGor5.CYUI01000576v1 61347 341 + 106623 ggcagattc-agctctgggaggccagcagaaatggcttttcggccctccttggattcagaaaatacttcttgaaagatatttgaggtaaatcttacgggattagaggttagccagacgaaaagaaatc--aagagaggagagagga-gccccccacaaaggactgacccagggcaataaca--gg-gg-----gaaa-------------------------gaa--cttggaggtacag-aggcagaccttggtgtttcccagggtttgggacgttgggggtagtaaggct-ggagtgggtagaggaaaggGCTAGGGTGACA-CCACGGGGTATTAGGTGGAACTGagggaaacagaaataggagcagagaaaagggaatg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404098 336 + 204787373 -ggagattc-agctctgggaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttctcgaaagagattcgagctaaatcttacaggattagaggttagccggatgataataaatc--aagaggggaaagagga-g-ctcccgcaaagggctgacccagggcagtgagaacag-gg-----gaaa-------------------------gag--ctcggaggta--g-aggcagaatctggtgtttcctggggtgcgggacgttaggggtagtaaggct-ggagtgggtagaggaaaggGCTAGGGTGACA-CCCCGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCAGGGAAAAGGGAACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 10816 336 + 192460366 -GGAGATTC-Agctctgggaggccagcag-aatggcttttaggtcttccttggattcagaaaatacttctcgaaagagattcgagctaaatcttacaggattagaggttagccggatgataataaatc--aagaggggaaagagga-g-ctcccgcaaagggctgacccagggcagtgagaacag-gg-----aaaa-------------------------gag--ctcggaggta--g-aggcagaatctggtgtttcctggggtgcaggacgttaggggtagtaaggct-ggagtgggtagaggaaaggGCTAGGGTGACA-CCCCGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCAGGGAAAAGGGAACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 486751 333 + 19675229 -GGAGATTCGAGCTCTGGGAGGCCAGCAG-AATGGCTTTTAGGTCCTTTCTTGATTCAGAAAATACTTCTCG-AAGAGATTCGAGCT-AATCTTACAGGATTAGAGGTTAGCC-GATGATAATAAATC--AAGAGGGGAAAGAGGAGG-CTCCCGC-AAGGGCTGA-CCAGGGCAGTGAGAACAG-GG-----GAAA-------------------------GAAGTCTCGGAGGTA--G-AGGCAGAATCTGGTGTTTCCTGGGGTGCGGGACGTTAGGGGTAGTAAGGCTGGGAGTGGGTAGAGGAAAGGGCTAGGTGAACT-CCCCGGGGTATTAGGCGGAACTGAGGAA-----ACATAGGAGCAGGGAAAGGGAACCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 418515 336 + 16847902 -GGAGATTC-Agctctgggaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttctcgaaagagattcgagctaaatcttacaggattagaggttagccggatgacaataaatc--aagagaggaaagagga-g-ctcccgcaaagggctgacccagggcagtgagaacag-gg-----gaaa-------------------------gag--ctcggaggta--g-aggcagaatctggtgtttcctggggtgcgggacgttgggggtagtaaggct-ggagcaggtagaggaaaggGCTAGGGTGACA-CCACGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCAGGGAAAAGGGAACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360349 338 - 91754291 -GAAGATTC-AGCTCCGGGAGGCCAGCAG-AATGACTTTTAGGTCTTCCTTGGATTCAGAAAATACTTCTCGAAAGAGATTCGAGCTAAATCTTACAGGATTAGAGGTTAGCTGGATGATAATAAATC--AAGAGAGGAAATAGGA-C-CTCCCGCAAAGGGCTGACCCAGGGCAGTGAGAACAG-GG-----GAAA-------------------------GAG--CTCGGAGGTACGG-AGGCAGAATTTGGTTTTTCCCGGGGTGTAGGATGTTGGGGAAAGTAAGGCT-GGAGCGGGTAGAGGAAAGGGCTAGGGTGACA-CCACAGGGTATTAGGCGGAACTGAGGGAAAC--AAataggagcagggaaaagggaatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511083 336 - 1977891 -GGAGATTC-Agctctgggaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttctcgcaagagattcgagctaaatcttacaggattcgaggttagccggatgacaataaatc--aagagaggaaagagga-g-ctcccgcaaagggctgacccagggcagtgagaacag-gg-----gaaa-------------------------gag--ctcggaggta--g-aggcagaatctggtgtttcctggggtgcgggacgttggggatagtaaggct-ggagcgggtagaggaaagCGCTAGGGTGACA-CCACGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAggagcagggaaaagggaacg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395581 337 + 7796314 -GGAGATTC-Agctctgggaggccagcag-aatggcttttaggtcctccttggattcagaaaatacttctcgaaagagattcaagctaaatcttacaggattagaggttagccggatgataataaatc--aagagaggcaagagga-g-ctcccgcaaagggctgacccagggcagtgagaatgg-gg-----gaaa-------------------------gag--ctcggaagtac-g-aggcagaatctggtgtttcccggcgtgcgggacattgggggtagtaaggct-ggagcgggtagaggaaagggctagGGTGACA-CCACAGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCagggaaaagggaatg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 849855 311 - 74750902 -------------agtgtgagatgggcag-aatggcttttaggtcctccttggattcagaaaatacttctctaaagagatttgagctaaatcttacaggattagaggtaagctggatgaaaataaacc--aagagaggaaacaggg-g-ct-ctgcaaaggcctg----------------acagcgg-----gaaa-------------------------gag--cttggaggtaaag-aggcaga-tttggtgattccc-gagtgtaggacgttggggacagtaaggct-gcagcgggtggaggaaagggctggggcgacacccatggggcaTTAGGTGGAGCTGAGGGAAACAGAAACGGGGGC-GCGAAAAGGGAATA i calJac3.chr17 C 0 I 316 s saiBol1.JH378146 393316 328 + 17725628 -------------CGAGTGAGATGAGCAG-AATGACTTTTAGGTCCTCCTTGGATTCAGAAAATACTTCTCTAAAGAGATTTGAGCT-AATCTTACAGGATTAGAGGTTAGCTAGATGAAAATAAATC--AAGAGAGGAAACAGGG-G-CTCCTGCAAGGGGCTGACCCAGGGCAATGGGAACAGCGG-----GAAA-------------------------GAG--CTTGGAGGTAAAG-AGGCAGA-TTTGGTGATTCCCAGAGTGAGGGACGTTGGGGATGGTAAGGCT-GCAGCAGGTGG-GGGAAGGGCTGGGGCGACACCCGTGGGGTATTAGGTGGAGCTTAGGGAAACagaaataggggcagggaaaggggaata i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3840361 345 + 6579706 GGCAGATTC-TGCCCTGGGAAGTCAGCAA-AGTAGCTCTTAGCCCCACCTTGGGTTCAG-CAACACTTCTGGAAGGAGATCT--------TTGCACAGGATTATTAGTTAGCCAGATGAAAATAAATCTTAAGAGAGAAAAAGGAG-A-TTCCAGCAAAGGTCTGATCTAGGGCAATGAAGGTAG-GGATGAAGAAATAAGACAAAACAAACAAAACCCCAGAAA--CTAGGAAGTGAAGTGGGCAGAATATGGTGATTCTCTGAG--------GATGGGGGTGAGAAGTCT-AGACTGACTC----------CTATGGGTGTG-TTACAGTTGGTT--GCAgaaatgaaggacatagaaatgaggacagaagaaagggggaa i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=45954.000000 s hg38.chr3_KI270779v1_alt 64651 6 + 205312 agaacg s panTro5.chr3 200049388 6 + 202621043 agaacg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31001 6 + 190779 agaacg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61688 6 + 106623 agaacg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404434 6 + 204787373 AGAACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11152 6 + 192460366 AGAACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487084 6 + 19675229 AGAACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 418851 6 + 16847902 AGAACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360687 6 - 91754291 agaacg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511419 6 - 1977891 agaacg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395918 6 + 7796314 agaacg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850482 6 - 74750902 AGAACA i calJac3.chr17 I 316 C 0 s saiBol1.JH378146 393644 6 + 17725628 agaatg i saiBol1.JH378146 C 0 I 338 s dasNov3.JH569502 3840706 6 + 6579706 agaagg i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=878498.000000 s hg38.chr3_KI270779v1_alt 64657 154 + 205312 ggaaagagggaggtgggaaatagaagagggaGTTTCCA-------------AACAGCAACAACAACAGAAACAAGTGTTTTGGG-TTGTGGA-GCGTTTGCCCTGCAGAGAGCTGGGTCTGCCCTTGTCCCTTTTG-GGGATTATGAATCAGTGCGTG-GAGCC--GCGCGGC s panTro5.chr3 200049394 154 + 202621043 ggaaagagggaggtgggaaatagaagagggaGTTTCCA-------------AACAGCAACAACAACAGAAACAAGTGTTTTGGG-TTGTGGA-GCATTTGCCCTGCAGAGAGCTGGGTCTGCCCTGGTCCCTTTTG-GGGATTATGGATCAGTGGGTG-GAGCC--ATGCGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31007 154 + 190779 ggaaagagggaggtgggaaatagaagagggaGTTTCCA-------------AACAGCAACAACAACAGAAACAAGTGTTTTGGG-TTGTGGA-GCGTTTGCCCTGCAGAGAGCTGGGTCTGCCCTGGTCCCTTTTG-GGGATTATGGATCAGTGGGTG-GAGCC--GCGTGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61694 154 + 106623 ggaaaaagggaggtgggaaatagaagagggaGTTTCCA-------------AACAGCAACAACAACAGAAACAAGTGTTTTGGG-TTGTGGA-GCGTTTGCCCTGCAGAGAGCTGGGTCTGCCCTGGTCCCTTTTG-GGGATTATGGATCAGTGGGTG-GAGCC--GCGCAGC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404440 153 + 204787373 GAAAAGAGGGAGGTGGGAAATAGGAGAGGGAGTTTCCA-------------AACAGCAAC-ACAACAGAAACAAGTGTATTGGG-TTGTGGA-GCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGTG-GGGATTATGGATCAGCGCGTG-GAGCT--GCGCGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11158 153 + 192460366 GAAAAGAGGGAGGTGGGAAATAGGAGAGGGAGTTTCCA-------------AACAGCAAC-ACAACAGAAACAAGTGTATTGGG-TTGTGGA-GCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGTG-GGGATTATGGATCAGCGCGTG-GAGCT--GCGCGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487090 153 + 19675229 GAAAAGAGGGAGGTGGGAAATAGGAGAGGACGTTTCCA-------------AACAGCAAC-AC-ACAGAAAAACGTGTATTGGGTTTGTGGAGGCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTG-G-GGGATTATGGATCAGCGCGTG-GAGCT--GCGCGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 418857 153 + 16847902 GAAAAGAGGGAGGTGGGAAATAGGAGAGGGAGTTTCCA-------------AATAGCAAC-ACAACAGAAACAAGTGTATTGGG-TTGTGGA-GCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGTG-GGGATTATGGATCAGTGTGTG-GAGCC--ACGCGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360693 153 - 91754291 ggaaacagggaggtgggaaataggagagggagTTTCCA-------------AACAGCAAC-ACAACAGAAACAAGTGTATTGAG-TTGTGGA-GCATTTGCCCTGGAGAGAGCTGGGTCTGCCCTGGACATTTGTG-GGGATTATGGATCAGTGCATG-GAGCC--GCGCGGC i chlSab2.chr15 C 0 I 102 s manLeu1.NW_012102020v1 511425 153 - 1977891 gaaaagagggaggtgggaaATAGGAGAGGGAGTTTCCA-------------AATAGCAAC-ACAACAGAAACAAGTGTATTGGG-TTGTGGA-GCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGCG-GGGATTATGGATCAGTGTGTG-GAGCT--GCACGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 395924 153 + 7796314 ggaaagagggaggtgggaaataggagagggaGTTTCCA-------------AACAGCAAC-ACCAGAGAAACAAGTGTATTGGG-TTGTGGA-GCATTTGCCCTGGAGAGAGCTGGGTCTGCCCTGGACATTTGTG-GGGATTATGGATCAGCACATA-GAGCC--GTGCGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850488 155 - 74750902 GGAAAGAGAGAGGGGGGAAATAGGAAAGGGAATTTCCA-------------AACAGCAAGAACAGCAGAAACAAGTTTATTGGG-TTGTGGA-GCATTTGCCCTGCACGACGCTGTGTCCGGCCGGGATGCTCTTG-AGGATTGTGTATCAGTGCGTATCAGCC--GCGTGAG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 393988 154 + 17725628 ggaaagagagagtggggaaataggagagggagTTTCCA-------------AACAGCAAGAACAGCAGAAACAAGTTTATTGGG-TTGTGGA-GCATGTGCCCTGCACAGCGCTGAGTCCGGCCTGGATG-TTTTG-AGGGTCACGGATCAGTGCGTGTAAGCC--GCGTGAG i saiBol1.JH378146 I 338 I 1 s dasNov3.JH569502 3840712 152 + 6579706 -agaaaggaaagtagagaaaagggagacagggtgtcaaggacaggaagaagaaaaacaaa-acaaaacaaagaaGCTCATTGCG-TTCATAA-AC----------------GCTGTTGCCTCCTCAGACATTTTGGCGGGTTTATAAATAAGTAGATG-TAACCCGACTCGGT i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=106235.000000 s hg38.chr3_KI270779v1_alt 64811 15 + 205312 CACA-TCCACCATTCA-- s panTro5.chr3 200049548 15 + 202621043 CACA-TCCACCATTCA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31161 15 + 190779 CACA-TCCACCATTCA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61848 15 + 106623 CACA-TCCACCATTCA-- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404593 15 + 204787373 CACA-TCCACCATTCA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11311 15 + 192460366 CACA-TCCACCATTCA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487243 15 + 19675229 CACA-TCCACCATTCA-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419010 15 + 16847902 CACA-TCCACCATTCA-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360948 15 - 91754291 CACA-TCCACCATTCA-- i chlSab2.chr15 I 102 C 0 s manLeu1.NW_012102020v1 511578 15 - 1977891 CACA-TCCACCATTCA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396077 15 + 7796314 CACA-TCCACCATTCA-- i colAng1.NW_012118932v1 C 0 I 120 s calJac3.chr17 850644 15 - 74750902 CACA-TTCACCATTTG-- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 394143 15 + 17725628 CACA-GTCACCATTCG-- i saiBol1.JH378146 I 1 C 0 s dasNov3.JH569502 3840864 18 + 6579706 CATATTCCACCATTCATA i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=17381.000000 s hg38.chr3_KI270779v1_alt 64826 2 + 205312 CT s panTro5.chr3 200049563 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31176 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61863 2 + 106623 CT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404608 2 + 204787373 CT i rheMac8.chr2 C 0 I 361 s macFas5.chr2 11326 2 + 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487258 2 + 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419025 2 + 16847902 CT i cerAty1.NW_012004056v1 C 0 I 409 s chlSab2.chr15 360963 2 - 91754291 CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511593 2 - 1977891 CT i manLeu1.NW_012102020v1 C 0 I 240 s colAng1.NW_012118932v1 396212 2 + 7796314 CT i colAng1.NW_012118932v1 I 120 C 0 s calJac3.chr17 850659 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394158 2 + 17725628 CT i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3840882 2 + 6579706 CT i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=37592.000000 s hg38.chr3_KI270779v1_alt 64828 6 + 205312 TGCACT s panTro5.chr3 200049565 6 + 202621043 TGCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31178 6 + 190779 TGCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61865 6 + 106623 TGCACT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404971 6 + 204787373 TGCACC i rheMac8.chr2 I 361 C 0 s macFas5.chr2 11328 6 + 192460366 TGTATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487260 6 + 19675229 TGTATC i macNem1.NW_012014355v1 C 0 I 261 s cerAty1.NW_012004056v1 419436 6 + 16847902 TGCACC i cerAty1.NW_012004056v1 I 409 C 0 s chlSab2.chr15 360965 6 - 91754291 TGCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511835 6 - 1977891 TGCACC i manLeu1.NW_012102020v1 I 240 C 0 s colAng1.NW_012118932v1 396214 6 + 7796314 TGCAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850661 6 - 74750902 TGCACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394160 6 + 17725628 TGCACC i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3840884 6 + 6579706 TGCACT i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=72246.000000 s hg38.chr3_KI270779v1_alt 64834 11 + 205312 TGAGTGAC-----AGC s panTro5.chr3 200049571 11 + 202621043 TGAGTGAC-----AGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31184 11 + 190779 TGAGTGAC-----AGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61871 11 + 106623 TGAGTGAC-----AGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404977 11 + 204787373 TGAGTGAC-----AGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11334 11 + 192460366 TGAGTGAC-----GGC i macFas5.chr2 C 0 I 361 s macNem1.NW_012014355v1 487527 11 + 19675229 TGAGTGAC-----AGC i macNem1.NW_012014355v1 I 261 C 0 s cerAty1.NW_012004056v1 419442 11 + 16847902 TGAGTGAC-----AGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360971 11 - 91754291 TGAGTGAC-----AGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511841 11 - 1977891 TGAGTGAC-----AGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396220 11 + 7796314 TGAGTGAC-----AGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850667 11 - 74750902 TGAATGAC-----AGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394166 16 + 17725628 TGAATGACGGCTAAGC i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3840890 11 + 6579706 TGAATTTT-----AAC i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=85845.000000 s hg38.chr3_KI270779v1_alt 64845 11 + 205312 CAAGCTACAGT s panTro5.chr3 200049582 11 + 202621043 CAAGCTACAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31195 11 + 190779 CAAGCTACAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61882 11 + 106623 CAAGCTACAGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404988 11 + 204787373 CAAGCTACAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11706 11 + 192460366 CAAGCTACAGT i macFas5.chr2 I 361 C 0 s macNem1.NW_012014355v1 487538 11 + 19675229 CAAGCTACAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419453 11 + 16847902 CAAGCTACAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360982 11 - 91754291 CAAGCTACAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511852 11 - 1977891 CAAGCTACAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396231 11 + 7796314 CAAGCTACAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850678 11 - 74750902 TAAGCTACAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394182 11 + 17725628 TAAGCTACAGT i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3840901 11 + 6579706 CATGTTATAGT i dasNov3.JH569502 C 0 I 321 e nomLeu3.chr11 120806746 10 + 123690457 I a score=1234322.000000 s hg38.chr3_KI270779v1_alt 64856 210 + 205312 CATGAATACGTTTCTTTCT----TTTTACAgaagaacagtaaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacgtatcTGGTGCTGCA-TTGGAATCATCCCAAAAAACCAAGGCTTGCATTGCA-TATCTATCTGCTGTCTGCTGAAGGA s panTro5.chr3 200049593 210 + 202621043 CATGAATACGTTTCTTTCT----TTTTAAAgaagaacagtaaattgactttattccttatgaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacgtatcTGGTGCTGCA-TTGGAATCATCCCAAAAAACCAAGGCTTGCATTGCA-TATCTATCTGCTGTCTGCTGAAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31206 210 + 190779 CATGAATACGTTTCTTTCT----TTTTAAAGAAGAACAGTAAATTGActttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacGTGTCTGGTGCTGCA-TTGGAATCATCCCAAAAAACCAAGGCTTGCATTGCA-TATCTATCTGCTGTCTGCTGAAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 61893 210 + 106623 CATGAATACGTTTCTTTCT----TTTTACAGAAGAACAGTAAATTGActttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacgtatcTGGTGCTGCA-TTGGAATCATTCCAAGAAACCAAGGCTTGCATTGCA-TATCTATCTGCTGTCTGCTGAAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202404999 211 + 204787373 CATGACTACGTTTCTTTCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgaacaaaccccagaattggacagacgtatccaGCGCTACA-TTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCA-TATCTATCTGCTGCCTGCTGAAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11717 207 + 192460366 CATGACTACGTTTCTTTCT----TTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatacatttgctggcacatgggtttcctatgaacaaaccccagaattggacagacgtatccaGCGCTACA-TTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCA-TATCTATCTGCTGCCTGCTGAAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487549 208 + 19675229 CATGACTACGTTTCTTTCTT--CTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctgccacatgg--ttcctatgaacaaaccccagaattggacag-cgtatccaGCGCTACATTTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCAGTATCTATCTGCTGCCTGCTGAAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419464 211 + 16847902 CATGACTACGTTTCTTCCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgaacaaaccccagaattggacagacgtatccaGTGCTACA-TTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCA-TATCTATCTGCTGCCTGCTGAAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 360993 206 - 91754291 CATGACTACG----TTTCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgaacaaaccccagaattggacagatgtatccaGTGCTACA-CTGGAACCATCCC-AAAAACCAAGGCCTGCATTGCA-TATCTATCTGCTGTCTGCTGAAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 511863 211 - 1977891 CATGACTACGTTTCTTTCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgaacaaaccccagaattggacagacgtatccaGTGCTACA-TTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCA-TATCTATCTGCTGCCTGCTGAAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396242 211 + 7796314 CATGACTACGTTTCTTTCTTTCTTTTCA---AagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagattcgctggcacgtgggtttcctatgaacaaaccccagaattggacagacgtatccaGTGCTACA-TTGGAACCATCCCAAAAAACCAAGGCCTGCACTGCA-TTTCTATCTGCTGTCTGCTGAAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850689 198 - 74750902 TACGGCTACATTTCTTTCTT---TTTTT---AAGAACAGTAAATTGActtcgttccttataaagctgatactggagaatgtgacatagattcgctggcatgtgggtttcctgtgaataaaccccaaaactggacagacttacccaGTGCTACA-TTGGGACCATCACAGAAAGCCAAGGCCTGCATTCTG-TATCTCCCTGTTGTC---------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394193 204 + 17725628 TATGGCTATATTTCTTTCTT---TTTTT---AagaacaataaattggctttattccttataaagctgatactggagaatgtgacatagatttgctggcacatggatttcttgtgaataaactccaaaattggagagacttacccaGGGCTGCG--CGGGACCATCACGAAAAGCCAAGGCCTGCATTCTG-TGTCCACCTGTTGTC---TGAAGGG i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=48071.000000 s hg38.chr3_KI270779v1_alt 65066 18 + 205312 GCCCTGTCTGTGTGCC----CA s panTro5.chr3 200049803 18 + 202621043 GCCCTGTCTGTGTGCC----CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31416 18 + 190779 GCCCTGTCTGTGTGCC----CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62103 18 + 106623 GCCCTGTCTGTGTGCC----CA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202405210 16 + 204787373 GCCCTGTCTGTGTGCC------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 11924 18 + 192460366 GCCCTGTCTGTGTGCCCA---- i macFas5.chr2 C 0 T 18 s macNem1.NW_012014355v1 487757 15 + 19675229 G-CCTGTCTGTGTGCC------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419675 16 + 16847902 GCCCTGTCTGTGTGCC------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 361199 16 - 91754291 GCCCTGTCTGTGTGCC------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 512074 18 - 1977891 GCCCTGTCTGTGTGCC--CA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396453 10 + 7796314 GCCCTGTCTG------------ i colAng1.NW_012118932v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e calJac3.chr17 850887 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=35208.000000 s hg38.chr3_KI270779v1_alt 65084 43 + 205312 AGGA-AGTGACATCCTTGCCAAGGGCTGTCCCTGTCGCAGGAGA s panTro5.chr3 200049821 43 + 202621043 AGGA-AGTGACATCTTTGCCAAGGGCTGTCCCTGTCGCAGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31434 43 + 190779 AGGA-AGTGACATCCTTGCCAAGGGCTGTCCCTGTCGCAGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62121 43 + 106623 AGGA-AGTGACATCCTTGCCAAGGGCTGTCCCTGTCGCAGGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s manLeu1.NW_012102020v1 512092 44 - 1977891 AGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGAAGA i manLeu1.NW_012102020v1 C 0 I 36 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487772 0 + 19675229 C e calJac3.chr17 850887 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e colAng1.NW_012118932v1 396463 0 + 7796314 C e chlSab2.chr15 361215 0 - 91754291 C e cerAty1.NW_012004056v1 419691 0 + 16847902 C e macFas5.chr2 11942 18 + 192460366 T e rheMac8.chr2 202405226 0 + 204787373 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=9566.000000 s hg38.chr3_KI270779v1_alt 65127 13 + 205312 TGAAGGAGCCCTG s panTro5.chr3 200049864 13 + 202621043 TGAAGGAGCCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31477 13 + 190779 TGAAGGAGCCCTG i panPan2.chrUn_NW_014024201v1 C 0 I 69 s gorGor5.CYUI01000576v1 62164 13 + 106623 TGAAGGAGCGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 850887 12 - 74750902 TGAAGG-GCCCTG i calJac3.chr17 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487772 0 + 19675229 C e saiBol1.JH378146 394397 0 + 17725628 C e colAng1.NW_012118932v1 396463 0 + 7796314 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361215 0 - 91754291 C e cerAty1.NW_012004056v1 419691 0 + 16847902 C e macFas5.chr2 11942 18 + 192460366 T e rheMac8.chr2 202405226 0 + 204787373 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=3373.000000 s hg38.chr3_KI270779v1_alt 65140 4 + 205312 TCTA s panTro5.chr3 200049877 4 + 202621043 TCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31559 4 + 190779 TCTA i panPan2.chrUn_NW_014024201v1 I 69 C 0 s gorGor5.CYUI01000576v1 62177 4 + 106623 TCTA i gorGor5.CYUI01000576v1 C 0 C 0 s colAng1.NW_012118932v1 396463 2 + 7796314 --TG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 850899 4 - 74750902 TCTA i calJac3.chr17 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487772 0 + 19675229 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361215 0 - 91754291 C e cerAty1.NW_012004056v1 419691 0 + 16847902 C e macFas5.chr2 11942 18 + 192460366 T e rheMac8.chr2 202405226 0 + 204787373 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=-1277.000000 s hg38.chr3_KI270779v1_alt 65144 3 + 205312 TGT s panTro5.chr3 200049881 3 + 202621043 TGT i panTro5.chr3 C 0 I 69 s panPan2.chrUn_NW_014024201v1 31563 3 + 190779 TGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62181 1 + 106623 T-- i gorGor5.CYUI01000576v1 C 0 C 0 s colAng1.NW_012118932v1 396465 1 + 7796314 T-- i colAng1.NW_012118932v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487772 0 + 19675229 C e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361215 0 - 91754291 C e cerAty1.NW_012004056v1 419691 0 + 16847902 C e macFas5.chr2 11942 18 + 192460366 T e rheMac8.chr2 202405226 0 + 204787373 C e nomLeu3.chr11 120806746 10 + 123690457 I a score=55263.000000 s hg38.chr3_KI270779v1_alt 65147 24 + 205312 GCTCAAGGACAGTGGCTTCCTTGC s panTro5.chr3 200049953 24 + 202621043 GCTCAAGGACAGTGGCTTCCTTGC i panTro5.chr3 I 69 C 0 s panPan2.chrUn_NW_014024201v1 31566 24 + 190779 GCTCAAGGACAGTGGCTTCCTTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202405226 21 + 204787373 ---CAAGGACAGTGGCTTCCTTGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 487772 21 + 19675229 ---CAAGGACAGTGGCTTCCTTGC i macNem1.NW_012014355v1 C 0 I 59 s cerAty1.NW_012004056v1 419691 21 + 16847902 ---CAAGGACAGTGGCTTCCTTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 361215 21 - 91754291 ---CAAGGACAGTGGCTTCCTTGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 396466 24 + 7796314 GCTCAAGGACAGTGCCTTCCTTGC i colAng1.NW_012118932v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e macFas5.chr2 11942 18 + 192460366 T e nomLeu3.chr11 120806746 10 + 123690457 I e gorGor5.CYUI01000576v1 62182 0 + 106623 C a score=44737.000000 s hg38.chr3_KI270779v1_alt 65171 25 + 205312 CAAGGGCTGTCCCTGTTGCAGGAGA s panTro5.chr3 200049977 25 + 202621043 CAAGGGCTGTCCCTGTTGCAGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31590 25 + 190779 CAAGGGCTGTCCCTGTTACAGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202405247 25 + 204787373 CAAGGGCCATCCCTATTGCAGGAGA i rheMac8.chr2 C 0 I 36 s cerAty1.NW_012004056v1 419712 25 + 16847902 CAAGGGCCATCCCTATTGCAGGAGA i cerAty1.NW_012004056v1 C 0 I 36 s chlSab2.chr15 361236 25 - 91754291 CAAGGGCCGCCCCTATTGCAGGAGA i chlSab2.chr15 C 0 I 37 s colAng1.NW_012118932v1 396490 25 + 7796314 CAAGGGCCGTCCCTATTGCAGGAGA i colAng1.NW_012118932v1 C 0 T 69 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e macFas5.chr2 11942 18 + 192460366 T e nomLeu3.chr11 120806746 10 + 123690457 I e gorGor5.CYUI01000576v1 62182 0 + 106623 C a score=3984.000000 s hg38.chr3_KI270779v1_alt 65196 7 + 205312 TGAAGGA s panTro5.chr3 200050002 7 + 202621043 TGAAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31615 7 + 190779 TGAAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s colAng1.NW_012118932v1 396446 7 + 7796314 TGAAGGA i colAng1.NW_012118932v1 T 69 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e macFas5.chr2 11942 18 + 192460366 T e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I e gorGor5.CYUI01000576v1 62182 0 + 106623 C a score=5910.000000 s hg38.chr3_KI270779v1_alt 65203 6 + 205312 GCCCTG s panTro5.chr3 200050009 6 + 202621043 GCCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31622 6 + 190779 GCCCTG i panPan2.chrUn_NW_014024201v1 C 0 T 138 s macFas5.chr2 11924 6 + 192460366 GCCCTG i macFas5.chr2 T 18 C 0 s colAng1.NW_012118932v1 396453 6 + 7796314 GCCCTG i colAng1.NW_012118932v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I e gorGor5.CYUI01000576v1 62182 0 + 106623 C a score=6050.000000 s hg38.chr3_KI270779v1_alt 65209 7 + 205312 TCTATGT s panTro5.chr3 200050015 7 + 202621043 TCTATGT i panTro5.chr3 C 0 T 138 s panPan2.chrUn_NW_014024201v1 31490 7 + 190779 TCTGTGT i panPan2.chrUn_NW_014024201v1 T 138 C 0 s gorGor5.CYUI01000576v1 62182 2 + 106623 -----GT i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 11930 7 + 192460366 TCTGTGT i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 396459 7 + 7796314 TCTGTGT i colAng1.NW_012118932v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=63736.000000 s hg38.chr3_KI270779v1_alt 65216 49 + 205312 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA s panTro5.chr3 200049884 49 + 202621043 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i panTro5.chr3 T 138 C 0 s panPan2.chrUn_NW_014024201v1 31497 49 + 190779 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62184 48 + 106623 GCTCAAGGACAGTGGCTTCCTTG-CAAGGGCTGTCCCTGTTGCAGGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 11937 49 + 192460366 GCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i macFas5.chr2 C 0 T 69 s colAng1.NW_012118932v1 396466 49 + 7796314 GCTCAAGGACAGTGCCTTCCTTGCCAAGGGCCGTCCCTATTGCAGGAGA i colAng1.NW_012118932v1 C 0 I 37 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=62776.000000 s hg38.chr3_KI270779v1_alt 65265 69 + 205312 TGAAGGAGCCCTGTCTATGTGCTCAAGGGCAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA s panTro5.chr3 200049933 69 + 202621043 TGAAGGAGCCCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31546 69 + 190779 TGAAGGAGCCCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTACAGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62232 69 + 106623 TGAAGGAGCCCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 11917 69 + 192460366 TGAAGGAGCCCTGTCTGTGTGCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i macFas5.chr2 T 69 T 44 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e colAng1.NW_012118932v1 396515 37 + 7796314 I e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=5184.000000 s hg38.chr3_KI270779v1_alt 65334 9 + 205312 TGAAGGAGC s panTro5.chr3 200050002 9 + 202621043 TGAAGGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31615 9 + 190779 TGAAGGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62301 9 + 106623 TGAAGGAGC i gorGor5.CYUI01000576v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e saiBol1.JH378146 394397 0 + 17725628 C e colAng1.NW_012118932v1 396515 37 + 7796314 I e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e macFas5.chr2 11986 44 + 192460366 T e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=33475.000000 s hg38.chr3_KI270779v1_alt 65343 71 + 205312 CCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTATCTGTTGCAGGAGATGAAGGAGCCC s panTro5.chr3 200050011 71 + 202621043 CCTGTCTATGTGCTCAAGGACAGTGCCTTCCTTGCCAAGGGCTGTATCTGTTGCAGGAGATGAAGGAGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31624 71 + 190779 CCTGTCTATGTGCTCAAGGACAGTGCCTTCCTTGCCAAGGGCTGTATCTGTTGCAGGAGATGAAGGAGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62310 71 + 106623 CCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTATCTGTTGCAGGAGATGAAGGAGCCC i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 394397 8 + 17725628 CCTGTCTA--------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e calJac3.chr17 850903 0 - 74750902 C e colAng1.NW_012118932v1 396515 37 + 7796314 I e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e macFas5.chr2 11986 44 + 192460366 T e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=11469.000000 s hg38.chr3_KI270779v1_alt 65414 10 + 205312 TGTGTGCCTG s panTro5.chr3 200050082 10 + 202621043 TGCGTGCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31695 10 + 190779 TGCGTGCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62381 10 + 106623 TGTGTGCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 850903 10 - 74750902 TGTGTGCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394405 10 + 17725628 TGTGTGCCCA i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e colAng1.NW_012118932v1 396515 37 + 7796314 I e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e macFas5.chr2 11986 44 + 192460366 T e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=147966.000000 s hg38.chr3_KI270779v1_alt 65424 116 + 205312 AGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCTTTCTTAGAGAAATAGGTCTCAAAGTGAATGAATATACCTCC------TCACATACTCACCA s panTro5.chr3 200050092 116 + 202621043 AGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCTTTCTTAGAGAAATAGGTCTCAAAGTGAATGAATATACCTCC------TCACATACTCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31705 116 + 190779 AGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCTTTCTTAGAGAAATAGGTCTCAAAGTGAATGAATATACCTCC------TCACATACTCACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62391 116 + 106623 AGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCTTTCTTAGAGAAATAGGTCTCAAAGTGAATGAATGTACCTCC------TCACATACTCACCA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 11942 81 + 192460366 AGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAG-AAAGCCTTTCAGGACCC-CTCTTACAGAAACACATCTCA---------------------------------------- i macFas5.chr2 T 44 C 0 s calJac3.chr17 850913 122 - 74750902 AGGAAAGTGACTTCCTTGTTGCGGGCTATCCCTGTCGCAGGAGAAAAGTCTTTCA-GACACCTTCTTAGAGAAATGCTTCTCAAAGTGAATAAATGAACCTTGTGCTCCTTACATACTCACCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 394415 113 + 17725628 AGGAAAGTGACTTCCTTGTCAAGGGCTGTCCCTGTCGCAGGAG-AAAGTCTTTCAGGACACCTTCTTAGAGTAACGCTTCTCAACGTGAATAAATGAACCTTG---------CACACTCACCA i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 487793 59 + 19675229 I e colAng1.NW_012118932v1 396515 37 + 7796314 I e manLeu1.NW_012102020v1 512136 36 - 1977891 I e chlSab2.chr15 361261 37 - 91754291 I e cerAty1.NW_012004056v1 419737 36 + 16847902 I e rheMac8.chr2 202405272 36 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=415147.000000 s hg38.chr3_KI270779v1_alt 65540 73 + 205312 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAACAGTTGATATCAACAGTCTCTCAA-TTCCT------TT s panTro5.chr3 200050208 76 + 202621043 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAACAGTTGATAACAACAGTCTCTCAA-TTTCT---TTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31821 79 + 190779 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAACAGTTGATATCAACAGTCTCTCAA-TTTCTttattatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62507 70 + 106623 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCA-GGAATAGTTGATATCAACAGTCTCTCAA-TTTCt-------- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202405308 74 + 204787373 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAA-TTTGA-----ATT i rheMac8.chr2 I 36 C 0 s macFas5.chr2 12023 73 + 192460366 -GCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAA-TTTGA-----ATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487852 76 + 19675229 AGCAGCCTGCAGAGGATACAGCTTTTCCATGTGACTCAGGGAGCAGTTGATATCAACATTCTCTCAAGTTTGA-----ATT i macNem1.NW_012014355v1 I 59 C 0 s cerAty1.NW_012004056v1 419773 74 + 16847902 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAA-TTTGA-----ATT i cerAty1.NW_012004056v1 I 36 C 0 s chlSab2.chr15 361298 74 - 91754291 AGCAGCCTGCAGAGGATATAGC-TTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAA-TTTGA-----ATT i chlSab2.chr15 I 37 C 0 s manLeu1.NW_012102020v1 512172 74 - 1977891 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAA-TTTGA-----ATT i manLeu1.NW_012102020v1 I 36 C 0 s colAng1.NW_012118932v1 396552 74 + 7796314 AGCAGCCTGCAGAGGATACAGC-TTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTGAA-tttga-----att i colAng1.NW_012118932v1 I 37 C 0 s calJac3.chr17 851035 73 - 74750902 AGCAACCTGCAGCAGACACAAC-TTTCCAAATGGCTCAAGGAGCAGTTTATATCGACATTCTCTCAA-tttct-----tt- i calJac3.chr17 C 0 I 957 s saiBol1.JH378146 394528 73 + 17725628 AGCAACCTGCAGAAGATACAGC-TTTCCAAATGGCTCAAGGAGCAGTTTATATCAAAATTCTCTCCG-tttct-----tt- i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=43446.000000 s hg38.chr3_KI270779v1_alt 65613 12 + 205312 Atta-ttattatt s panTro5.chr3 200050284 12 + 202621043 Atta-ttattatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31900 12 + 190779 atta-ttattatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62577 11 + 106623 -tta-ttattatt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202405382 13 + 204787373 Attatttattatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 12096 13 + 192460366 Attatttattatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487928 12 + 19675229 A-TAtttattatt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419847 13 + 16847902 Attatttgttatt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 361372 13 - 91754291 Attatttattatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 512246 13 - 1977891 Attatttgttatt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396626 13 + 7796314 attatttattatt i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 394601 12 + 17725628 -ttttttcttttt i saiBol1.JH378146 C 0 I 812 e dasNov3.JH569502 3840912 321 + 6579706 I e calJac3.chr17 851108 957 - 74750902 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=227525.000000 s hg38.chr3_KI270779v1_alt 65625 56 + 205312 attatactttaagttctgggatacatgt--gcagaacgtgcagcgttgttacata-ggt s panTro5.chr3 200050296 56 + 202621043 attatactttaagttctgggatacatgt--gcagaacatgcagggttgttacata-ggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31912 56 + 190779 attatactttaagttctgggatacatgt--gcagaacgtgcagggttgttacata-ggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62588 56 + 106623 attatactttaagttctgggatacatgt--gcagaacatgcagggttgttacata-ggt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202405395 54 + 204787373 attatactttaagttctggg--acatgt--gcagaacgtgcaggtttgtttcata-ggt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 12109 54 + 192460366 attatactttaagttctggg--acatgt--gcagaacgtgcaggtttgtttcata-ggt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487940 55 + 19675229 a-tatacttt-agttctggg--acatgctggcagaacgtgcaggtttgtttcatagggt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419860 54 + 16847902 attatactttaagttctggg--acacgt--gcagaacgtgcaggtttgtttcata-ggt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 361385 56 - 91754291 attatactttaagttctgggatacacgt--gcagaacgtgcaggtttgtttcata-ggt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 512259 54 - 1977891 attatactttaagttctggg--acatgt--gtagaacgtgcaggtttgtttcata-ggt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 396639 56 + 7796314 attatactttaagttctgggatacatgt--acagaacgtgcaggtttgttacata-ggt i colAng1.NW_012118932v1 C 0 M 1573 e dasNov3.JH569502 3840912 321 + 6579706 I e calJac3.chr17 851108 957 - 74750902 I e saiBol1.JH378146 394613 812 + 17725628 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=2436984.000000 s hg38.chr3_KI270779v1_alt 65681 675 + 205312 atatatgtgccatggtggtttgctgcacccatcaacctgtcatctacattgggtatttctcctaatgctatccctccccttgcccccaacctcccaacaggcaccggtgtgtgatg-ttcccctccctgtgtccatatgttctcattgttcaacttccacttatgagtgagaacatgcagtgtt-tggttttctgttcctgtgttagtttgctgagaatgatggtttccagtgtcatccatgatcctgcaaaggacatgaactcatcc-ttttttatggctgcatagtattccatggtgtctatgtg-ccacattttct-ttaaccagtctgtcattgatgggcatttgggttggttccaagtctttgctattgtgaatagt-gccgcaataaacatacatgtgctcggggctgggcgcggtggctcaaacctgtaatcccagca-ctttgggaggctgaggcgggtggatcacgaggtcaggagatcaag-accattctggccaacatggtgaaaccccttctcta-gtaaaatgcaaaaaatt-agctgggcgtggtggtgtgtgcctgtagttccagctact-caggaggctgaggcaagagaatcgcttgaacccgggaggtggaggttgcagtgag-ccgagaccgtgccactgcactc-cagcctggcaacagagcaagact s panTro5.chr3 200050352 675 + 202621043 atatatgtgccatggtggtttgctgcacccatcaacctgtcatctacattgggtatttctcctaatgctatccctccccttgcccccaacctcccaacaggccccagtgtgtgatg-ttcccctccctgtgtccatatgttctcattgttcagctcccacttatgagtgagaacatgtggtgtt-tggttttctgttcctgtgttagtttgctgagaatgatggtttccagtgtcatccatgtccctgcaaaggacatgaactcatct-ttttttatggctgcatagtattccgtggtgtctatgtg-ccacattttct-ttaaccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagt-gctgcaataaacatacatgtgcttggggctgggcgcggtggctcaaatctgtaatcccagca-ctttgggaggctgaggcgggtggatcacgaggtcaggagatcaag-accatcctggccagcatggtgaaaccccttctcta-gtaaaatgcaaaaaatt-aaccaggcgtggtggtgtgtgcctgtagttccagctact-caggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgag-ccgagaccgtgccactgcactc-cagcctggtaacagagcaagact i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 31968 674 + 190779 atatatgtgccatggtggtttgctgcacccatcaacctgtcatctacattgggtatttctcctaatgctatccctccccttgcccccaacctcccaactggcaccagtgtgtgatg-ttcccctctctgtgtccatatgttctcattgttcagctcccacttatgagtgagaacatgtggtgtt-tggttttctgttcctgtgttagtttgctgagaatgatggtttccagtgtcatccatgtccctgcaaaggacatgaactcatc--ttttttatggctgcatagtattccgtggtgtctatgtg-ccacattttct-ttaaccagtctatcattgatgggcatttgggttggttccaagtctttgctattgtgaatagt-gctgcaataaacataaatgtgcttggggctgggcgcggtggctcaaacctgtaatcccagca-ctttgggaggctgaggcgggtggatcacgaggtcaggagatcaag-accatcctggccaacatggtgaaaccccttctcta-gtaaaacgcaaaaaatt-agccgggcgtggtggtgtgtgcctgtagttccagctact-caggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgag-ccgagaccgtgccactgcactc-cagcctggtaacagagcaagact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 62644 674 + 106623 atatatgtgccatggtggtttgctgcacccatcagcctgtcatctacattgggtatttctcctaatgctatccctccccttg-ccccaacctcccaacgggcaccggtgtgtgatg-ttcccctccctgtgtccatatgttctcattgttcaacttccacttatgaatgagaacatgcggtgtt-tggttttctgttcctgtgttagtttgctgagaatgatggtttccagtgtcatccatgatcctgcaaaggacattaactcatcc-ttttttatggctgcatagtattccgtggtgtctatgtg-ccacattttct-ttaaccagtctatcattgatgggcatttgggttggttccaagtctttgctattgtgaatagt-gccacaataaacatacatgtgctcggggctgggtgcggtggctcaagcctgtaatcccagca-ctttgggaggctgaggcaggtggatcacgaggtcaggagatcaag-accatcctggccaacatggtgaaaccccttctcta-gtaaaatgcaaaaaatt-agccgggcgtggtggtgtgtgcctgtagttccagctact-caggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag-ccgagaccgtgccactgcactc-cagcctggtaacagagcaagact i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202405449 674 + 204787373 atgtacatgccatggt-gtttgctgcacccatcaacccgtcatctacattgggtatttctcctaatgctctccctgccccagccccccaccccctgacaggccgcggtgtgtgatg-ttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctt-tggttttctattcctgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaaggacatgaactcatgctttttttatggctgtatagtattccatagtgtatatgtg-ccacattttct-ttatccagtctatcattgatggacatttgggtaggttccaaatctttgctattgtgaatagt-gctgcaataaacatatgtgtgcttgggggtgggcacgatggctcacgcctgtaatcccagca-ctttgggaggctgaggcgggtggatcacaaggtcaggagatcgag-accatcctggccaacatggtgaaaccccgtctcta-gtaaaatgcaaaaaatt-agccaggcgtggtggtgtgtgcctgtggttccagctact-cgggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgag-ctgagactatgccattgcactc-cagcctggtgacacagcaagact i rheMac8.chr2 C 0 C 0 s macFas5.chr2 12163 674 + 192460366 atgtacgtgccatggt-gtttgctgcacccatcaacccgtcatctacattgggtatttctcctaatgctctccctgccccagccccccaccccctgacaggccgcggtgtgtgatg-ttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctt-tggttttctattcctgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaaggacatgaactcatgctttttttatggctgtatagtattccatagtgtatatgtg-ccacattttct-ttatccagtctatcattgatggacatttgggtaggttccaaatctttgctattgtgaatagt-gctgcaataaacatatgtgtgcttggggatgggcacgatggctcacgcctgtaatcccagca-ctttgggaggctgaggcaggtggatcacaaggtcaggagatcgag-accatcctggccaacatggtgaaaccccgtctcta-gtaaaatgcaaaaaatt-agccaggcgtggtggtgtgtgcctgtggttccagctact-cgggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgag-ccgagactatgccattgcactc-cagcctggtgacagagcaagact i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 487995 673 + 19675229 atgtacgtgccatggt-gtttgctgcacccatcaacgcgtcatctacattgggtatttctcctaatgctctccctgccccagcccccc-ccgcctgacaggccccggtgtgtgatgtttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtcttgtggttttctattcctgtgatagtttgctgagaatgatggtttccagcttcatccatgt-cctgcaaaggacatgaactcatgctttttttatggcggtatagtattccat-gtgtatatgtgcccacattttctcttatccagtctatcattgatggaca-ttgggtaggttctaaa-ctttgctattgtgaatagtggctgcaataaacatatgt-tgcttggggatgggcacgatggctcacgcctgtaa--ccagcagctttgggaggctgaggcgggt-gatcacaaggtcaggagatcgagaaccatcct-gccaacatggtgaaaccccatctctatgtaaaatgcaaaaaattaagccaggcgtg--tgtgtgtgcctgtgtgtccagctactccgggaggctgaggcaggagaatcacttgaa-ctggagaatggaggttgcagtgagcccgagacttggccattgcactctcagcctggtgacagagcaagatt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 419914 663 + 16847902 atgtacgtgctgtggt-gtttgctgcacccatcaacccgtcagctacgttgggcatttctcctaatgctctccctgccccagccccca-ccccctgaca---------gtgtgatg-ttcccctccct-tgtccatgtgttctcattgttcaactcccaccaatgagggagaacatgcggtctt-tggttttctattcctgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaaggacatgaactcatgc-ttttttatggctgtatagtattccatagtgtatatgtg-ccacattttct-ttatccagtctatcattgatggacatttgggtaggttccaaatctttgctattgtgaatagt-gctgcaataaacatatgtgtgcttggggatgggcacgatggctcacgcctgtaatcccagca-ctttgggaggctgaggcggttggatcacaaggtcaggagatcgag-accatcctggccaacatggtgaaaccccgtctcta-gtaaaatgcaaaaaatt-agccaggcgtggtggtgtgtgcctgtggttccagctact-cgggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgag-ccgagactatgccattgcactc-cagcctggtgacagagcaagact i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 361441 675 - 91754291 atatatgtgccatggcggtttgctgcacccatcaacccgtcatctacattgggtatttctcctaatgctctccctcccctagccccctaccccctgacagtccctggtgtgtgatg-ttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctt-tggttttctattcctgtgatagtttgctgaaaatgatggtttccagcttcatccatatccctgcaaaggacatgaactcatcccttttttatggctgcatagtattccatggtgtatatgtg-ccacattttct-ttatccagtctatcattgatggatgtttgggtaggttctaaatctttgctattgtgaatagt-gctgcaataaacatatgtgtgcttgGggctgggcacgatggctcacgcctgtaatcccaaca-ctttgggaagctgaggcgggtggatcacaaggtcaggagatcgag-accatcctggccaacatggtgaaacctcgtctcta-gtaaaatgcaaaaaatt-agccaggcgtggtggtgtgtgcctgtagttccagctact-cgggaggctgaggcaggagaatcacttgagcttgggaggtggaggttgcagtgag-ctgagaccgtgccattgcactc-cagcctggtgacagagcaagact i chlSab2.chr15 C 0 I 82 s manLeu1.NW_012102020v1 512313 664 - 1977891 acgtacgtgccgtggt-gtttgctgcacccatcaacccgtcagctacgttgggcatttctcctaatgctctccctgccccagccccc-accccctgaca---------gtgtgatg-ttcccctccct-tgtccatgtgttctcattgttcaactcccaccaatgagtgagaacatgcagtctt-tggttttctattcctgtgatagtttgcggagaatgatggtttccagcttcatccatgtccctgcaaaggacatgaactcatgctttttttatggctgtatagtattccatagtgcatatgtg-ccacattttct-ttatccagtctatcattgatggacatttgggtaggttccaaatctttgctattgtgaatagt-gctgcaataaacatatgtgtgcttggggatgggcacgatggctcacgcctgtaatcccaaca-ctttgggaggctgaggcgggtggatcacaaggtcaggagatcgag-accatcctggccaacatggtgaaaccccgtctcta-gtaaaatgcaaaaaatt-agccaggcgtggtggtgtgtgcctgtggttccagctact-cgggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgag-ccgagactatgccattgcactc-cagcctggtgacagagcaagact i manLeu1.NW_012102020v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e calJac3.chr17 851108 957 - 74750902 I e saiBol1.JH378146 394613 812 + 17725628 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=18503.000000 s hg38.chr3_KI270779v1_alt 66356 17 + 205312 ccgtctcaa----aaataa----------------------ta s panTro5.chr3 200051027 21 + 202621043 ccgtctcaaaaataaataa----------------------ta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 32642 21 + 190779 ccgtctcaaaaataaataa----------------------ta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63318 17 + 106623 ccgtctcaa----aaataa----------------------ta i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406123 28 + 204787373 --gtatcaaaaataaataa-ataaata------------agca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 12837 32 + 192460366 --gtatcaaaaataaataa-ataaataaat--------aagca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 488668 31 + 19675229 --gtatc-aaaataaataatataaataaat---------agca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 420577 40 + 16847902 --gtatcaaaaataaataa-ataaataaataaataaataagca i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 512977 32 - 1977891 --gtaccaaaaataaataa-ataaataaat--------aagca i manLeu1.NW_012102020v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e calJac3.chr17 851108 957 - 74750902 I e saiBol1.JH378146 394613 812 + 17725628 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e chlSab2.chr15 362116 82 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=556956.000000 s hg38.chr3_KI270779v1_alt 66373 112 + 205312 aataaacatacgtgtgcatgtgtctttacagtagaatgatttataatcctttgggtatatacc-cagtaatgggatggctgggtcaaatggtatt-tctagttctagatccttg s panTro5.chr3 200051048 112 + 202621043 aataaacatacgtgtgcatgtgtctttacagtagaatgagttataatcctttgggtatatacc-cagtaatgggatggctgggtcaaatggtatt-tctagttctagatccttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 32663 112 + 190779 aataaacatacgtgtgcatgtgtctttacagtagaatgatttataatcctttgggtatatacc-cagtaatgggatggctgggtcaaatggtatt-tctagttctagatccttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63335 112 + 106623 aataaacatacgtgtgcatgtgtctttacagtagaatgatttataatcctttgggtatatacc-cagtaatgggatggctgggtcaaatggtgtt-tctagttctagatccttg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406151 112 + 204787373 aacaaacgtatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggcataatcc-cagtaatgggattgctgggtcaaatggtatt-tctagtgctagatccttg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 12869 112 + 192460366 aacaaacgtatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggcatatacc-cagtaatgggattgctgggtcaaatggtatt-tctagtgctagatccttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 488699 112 + 19675229 aacaaacgta-gtgtgcatgtgtctttatagcagcatgatttataa-cctttgggcatataccatagtaatgggattgctgggtcaaatggtattctctagtgctagatccttg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 420617 112 + 16847902 aacaaacgtgtgtgtgcatgtgtctttatagcagcatgatttataatcctttgggcatatacc-cagtaatgggattgctgggtcaaatggtatt-tctagtgctagatccttg i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 513009 112 - 1977891 aacaaacgtatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggcatatacc-cagtaatgggattgctgggtcaaatggtatt-tctagtgctagatccttg i manLeu1.NW_012102020v1 C 0 I 352 s calJac3.chr17 852065 112 - 74750902 aataagcatatgtgtgcatgtgtcctttcagtagagtgatttataatccatcgagtatatacc-cagtaatgggattgctgggtcaaatggtgtt-tctagttgtaggtccttg i calJac3.chr17 I 957 C 0 s saiBol1.JH378146 395425 111 + 17725628 aataagcatatgtgtgcatgtgtccttttagtagagtgatttataatccatcgagtacatact-cagtaa-aggattgctgggtcatatggtact-tctggttttagatccttg i saiBol1.JH378146 I 812 C 0 s cebCap1.NW_016107444v1 352098 111 - 6778120 aataagcatatgtgtgcatgtgcccttttagtagagtgatttataatccatcgagcgtatacc-cagtaa-aggattgctgggtcaaatggcatt-tctagttgtagatccttg i cebCap1.NW_016107444v1 N 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e chlSab2.chr15 362116 82 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=151560.000000 s hg38.chr3_KI270779v1_alt 66485 27 + 205312 agg-aatcgccacactgtcttc-cacaat s panTro5.chr3 200051160 27 + 202621043 agg-aatcgccacactgtcttc-cacaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 32775 27 + 190779 agg-aattgccacactgtcttc-cacaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63447 27 + 106623 agg-aatcgccacactgtcttc-cacaat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406263 27 + 204787373 agg-aatcgccacactgtcttc-cacaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 12981 27 + 192460366 agg-aatcgccacactgtcttc-cacaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 488811 29 + 19675229 aggaaatcgccacactgtcttcacacaat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 420729 27 + 16847902 agg-aatcgccacactgtcttc-cacaat i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 513473 27 - 1977891 agg-aatcgccacactgtcttc-cacaat i manLeu1.NW_012102020v1 I 352 C 0 s calJac3.chr17 852177 27 - 74750902 agg-agtctccacaccgtcttc-cacaat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 395536 27 + 17725628 agg-aatcaccacactgtcttc-cacaat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 352209 27 - 6778120 agg-aatcaccacactgtcttc-cacaat i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e chlSab2.chr15 362116 82 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=88479.000000 s hg38.chr3_KI270779v1_alt 66512 14 + 205312 ggttgaactaattt s panTro5.chr3 200051187 14 + 202621043 ggttgaactaattt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 32802 14 + 190779 ggttgaactaattt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63474 14 + 106623 ggttgaactaattt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406290 14 + 204787373 ggttgaactagttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13008 14 + 192460366 ggttgaactagttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 488840 13 + 19675229 ggttg-actagttt i macNem1.NW_012014355v1 C 0 I 41 s cerAty1.NW_012004056v1 420756 14 + 16847902 ggttgaactagttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 362198 14 - 91754291 ggttgaactagttt i chlSab2.chr15 I 82 C 0 s manLeu1.NW_012102020v1 513500 14 - 1977891 ggttgaactagttt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 852204 14 - 74750902 gggtgaactaattt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 395563 14 + 17725628 ggttgaactaattt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 352236 14 - 6778120 ggttgaactaattt i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=178066.000000 s hg38.chr3_KI270779v1_alt 66526 33 + 205312 gcactcccaccaacagtgtaaaactattcctat s panTro5.chr3 200051201 33 + 202621043 gcactcccaccaacagtgtaaaaatgttcctat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 32816 33 + 190779 gcactcccaccaacagtgtaaaaatgttcctat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63488 33 + 106623 gcactcccaccaacagtgtaaaaatgttcctat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406304 33 + 204787373 acagtcccaccaacagtgtaaaagtgttcctgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13022 33 + 192460366 acagtcccaccaacagtgtaaaagtgttcctgt i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 420770 33 + 16847902 acagtcccaccaacagtgtaaaagtgttcctat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 362212 33 - 91754291 acagtcccaccaacagtgtaaaagtgttcctat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 513514 33 - 1977891 acagtcccaccaacagtgtaaaagtgttcctat i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 852218 33 - 74750902 acactcccaccagcagtgtaaaagcgtttctat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 395577 33 + 17725628 acactcccaccaacagtgtaaaagtgttcctgt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 352250 33 - 6778120 acactcccaccaacagtgtaaaagcattcctat i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e macNem1.NW_012014355v1 488853 41 + 19675229 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=3550149.000000 s hg38.chr3_KI270779v1_alt 66559 588 + 205312 ttctctacatcct------ctccagcatctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatgatatctcattgtggttttgatttgcatttctctaatgatcagtgacgatgag-tttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatcctttgcacactttctgatggggttgtttg-----ttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcggatggatagattgcaaaaattttcttccattctgtaggttgcctgttcactctgcctggtc---------atatgcagaaaaccgaaactagaccccttgctgaca-cttatacaaaaattaactcaagatgcattaaagatttaaacgtgagacctaaaaccagaaaaatcctagaagaaaacctaggcaaca-ccattgaggacgtaagcatgggcaaagac-ttcatgactaaaacaccaaaagaaatggcaacaaaagccaaaattgacaaaaggtatctaatgaaactagagagcttctgcacagcaTGACTGTATTTCAGTGCACGTTTACCA s panTro5.chr3 200051234 593 + 202621043 ttctctacatcct------ctccagcatctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctaatgatcagtgacgatgagctttttttcgtatgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatcctttgcacactttctgacggggttgtttg-----ttcttgtaaatttacttaagttccttgtaaattctggataccagccctttgttggatggatagattgcaaaaatttttttccattctgtaggttgcctgttcactctggctggtc---------atatgcagaaaaccgaaactagacccctttctgacaccttatataaaaattaactcaagatgcattaaagatttaaacgtgagacctaaaaccagaaaaatcctagaagaaaacctaggcaata-ccattgaggacataagcatgggcaaagactttcatgactaaaacaccaaaaggaatggcaacaaaagccaaaattgacaaaaggtatctaatgaaactagagagcttctgcacagcaTGACTGTATTTCAGTGCACGTTTACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 32849 592 + 190779 ttctctacatcct------ctccagcatctgttgtttcgtgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctaatgatcagtgacgatgagctttttttcgtatgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatcctttgcacactttctgatggggttgtttg-----ttcttgtaaatttacttaagttccttgtaaattctggatatcagccctttgttggatggatagattgcaaaaattttcttccattctgtaggttgcctgttcactctggctggtc---------atatgcagaaaaccgaaactagaccccttcctgacaccttatataaaaattaactcaagatgcattaaagatttaaacgtgagacctaaaaccagaaaaatcctagaagaaaacctaggcaata-ccattgaggacataagcatgggcaaagac-ttcatgactaaaacaccaaaaggaatggcaacaaaagccaaaattgacaaaaggtatctaatgaaactacagagcttctgcacagcaTGACTGTATTTCAGTGCACGTTTACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 63521 592 + 106623 ttctctacatcct------ctccagcatctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctaatgatcagtgacaatgagctttttttcgtatgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatcctttgcacactttctgatggggttgtttg-----ttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcggatggatagattgcaaaaattttcttccattctgtaggttgcctgttcactctggctggtc---------atatgcagaaaactgaaactagaccccttcctgacaccttatacaaaaattaactcaagatgcattaaagatttaaacgtgagacctaaaaccagaaaactcctagaagaaaacctaggcaata-ccattgaggacataagcatgggcaaagac-ttcgtgactaaaacaccaaaaggaatggcaacaaaagccaaaattgacaaaaggtatctgatgaaactagagagcttctgcacaacaTGACTGTATTTCAGTGCACGTTTACCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406337 589 + 204787373 ttctccacatcct------ctccagcacttgttgtttcctgactttataatgatcaccattctacctggagtgagatggtatctcattgtggttgtgatttgcgtttctctaatgatcagtgatgatgagctttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaggttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtagg-tacctgttcactctggctagtc---------ttatgcggaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgtaagacctaaaaccagaaaaaccctagaagaaaacctaggcaata-ccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTGCAGTGCATGTTTACCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13055 589 + 192460366 tcctccacatcct------ctgcagcacttgttgtttcctgactttataatgatcaccattctacctggagtgagatggtatctcattatggttgtgatttgcgtttctctaatgatcagtgatgatgagctttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtagg-tacctgttcactctggctagtc---------ttatgcggaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgttagacctaaaaccagaaaaaccctagaagaaaacctaggcaata-ccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAGTGCATGTTTACCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 488894 603 + 19675229 -ttctcacatcctcgcccgctccagcacttgttgtttcctgactttataatgatcatcattctacctggagtgagatggtatctcattatggttgtgatttgtgtttctctaatgatcagtgatgatgagctttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtagg-tacctgttcactctggctagtcttatgccagttatgcggaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgtaagacctaaaaccagaaaaaccctagaagaaaacctaggcaata-ccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAGTGCATGTTTACCA i macNem1.NW_012014355v1 I 41 C 0 s cerAty1.NW_012004056v1 420803 590 + 16847902 ttctccacatccc------ctccagcacttgttgtttcctgactttataatgatcaccattctacctggagtgagatggtatctcattgtggttgtgatttgcgtttctctaatgatcagtgatgatgagctttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtaggttacctgttcactctggctagtc---------ttatgcagaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgtaagacctaaaaccagaaaaaccctagaagaaaacctaggcaata-ccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAGTGCATGTTTACCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 362245 597 - 91754291 ttctccacatcct------ctccagcacctgttgtttcctgactttttaatgatcaccattctacctggtgtgagatggtaactcattgtggttttgatttgcgtttctctaatgatcagtgatgatgagcttctgttcatatgtttgttggctgcataaatgtg-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagctccttataaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtaggttgcctgttcactctggctggtc---------ttatgcagaaaactgaaactagaccccttcctgacaccttatacaaaaattaactcaagatggattaaaaacttaaacataagacctaaaaccagaaaaactctagaagaaaacctaggcaata-ccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggtaacaaaagccaaaactcacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAATGCATGTTTACCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 513547 590 - 1977891 ttctccacatcct------ctccagcacttgttgtttcctgactttataatgatcaccattctacctggagtgagatggtatctcattgtggttgtgatttgcgtttctctaatgatcagtgatgatgagctttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatggattgtaaaaattttctcccattctgtaggttacctgttcactctggctagtc---------ttatgcagaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgtaagacctaaaaccagaaaaaccctagaagaaaacctaggcaata-ccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccgaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAGTGCATGTTTACCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 852251 577 - 74750902 ttctccacatcct------ctccagcatctgttgtttcccgactt--taatcattgccattctaactggcgcgagatggtatctcacgggagttgtgatttgcatttctctaatgaccagtgatgatgagcttttcttcatatgtttgttggctgcataaatgtcttcttttgaaaggtgtctgttcatatcctttgcccactttctgatgggatcgtttgtttttttcttgtaaatttgtttaagttccttgtagattctggatattagacctttgtcagatggatagactgc--aagttttctatcattctgtaggttgcctgttcactctggctagtc---------atatgcagaaaactgaaactagatccctttcttacaccttatacaaaaattaactcaagatggattaaagatttaaacgtaagacctaaaaccacaaaaatcctagaagaaaagctaggcaata-ccattcaggacgtaggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcatcaaaagccaaa-------------atctaattaaactcaagagct--------GCATGACTATATTTCAGTGCACATTTACCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 395610 575 + 17725628 ttctccacatcct------ctccagcatctgttgtttcccaactt--taataactgccgttctaactggctcgagatggtgtctcaccgtagttctgacttgcatttgtctaatgaacagtgacgatgagcttttcttcctatgtttgttggctgcataaatgtcttcttttgtaaagtgtctgttcatatcctttgcccactttctgatgggg----ttgtttttttcttgtaaatttgtttaagttccttgtagattctggatatcagatctttgtcagatggatagattgcaaaagttttctatcattctgcaggttgcctgttcactgtggctagtc---------atatgcagaaaactgaaactagaccccttccttacaccttatacaaaaattaactcaagatggattaaagatttaaacgtaagacctaaaaccataaaaatcctaggagaaaacctaggcaata-ccattcaggacataggcacgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaaaccaaa-------------atcttattaaactcaagagcC--------GCATGACTGTGTTTCAGTGCCCGTTTACCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 352283 571 - 6778120 ttctccacatcct------ggccagcatctgttgtttcgcgactt--taatgatggccattctaactggctcgagatggtatctcaccgtagttctgatttgcatttctctaatgaccagtgatgatgagcttttcttcgtatgtttgttggctgcataaatgtcttcttttgaaaggtgtctgttcatatcctttgcccactttctgatgggg----ttgtttttttcttgtgaatttgtttaagttccttgtagattctggatattagacctttgtccgatggatagattgcaaaagttttctatcattctgtaggttgcctgttcactctggccagtc---------atatgcagaaaactgaaactggatcctttccttacaccttatacaaaaattaacacaagatggattaaagattta-----aagacctaaaaccataaaaatcctagaagaaaacctaggcaatacccattcaggacataggcatgggcaaagac-ttcatgactaaaacagcaaaagcaattgcaacaaaagccaaa-------------atcaaattaaacttaagagct--------GCATGACTGTATTTCAGTGCACGATTACCA i cebCap1.NW_016107444v1 C 0 I 15 e dasNov3.JH569502 3840912 321 + 6579706 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=83106.000000 s hg38.chr3_KI270779v1_alt 67147 22 + 205312 CCGAGCTCTTAACGCTCCACCA s panTro5.chr3 200051827 22 + 202621043 CCGAGCTCTTAACGCTCCACCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33441 22 + 190779 CCGAGCTCTTAACGCTCCACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64113 22 + 106623 CCGAGCTCTTAACGCTCCACCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406926 22 + 204787373 CCGAACTCTTAATGCTCCACCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13644 22 + 192460366 CCGAACTCTTAATGCTCCACCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489497 22 + 19675229 CCGAACTCTTAATGCTCCACCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421393 22 + 16847902 CCGAACTCTTAATGCTCCACCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 362842 22 - 91754291 CCGAACTCTTAATTCTCCACCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514137 22 - 1977891 CCGAACTCTTAATGCTCCACCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 852828 18 - 74750902 --GTGC-CTTAGAGCTCCACC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396185 18 + 17725628 --GTGC-CGTAGAGCCTAGCC- i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e cebCap1.NW_016107444v1 352854 15 - 6778120 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=676477.000000 s hg38.chr3_KI270779v1_alt 67169 128 + 205312 CTGTCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGCGGggg-gg-ccggtcggcggcggaggggccagtggg--gacccggggcaggg-gCGGAG s panTro5.chr3 200051849 127 + 202621043 CTGTCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC-GGGG-GA-CCAGTGGGCGGCAGAGGGGCCAGTGGG--GACCCGGGGCAGGG-GCGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33463 127 + 190779 CTGTCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC-GGGG-GA-CCAGTGGGCGGCAGAGGGGCCAGTGGG--GACCCGGGGCAGGG-GCGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64135 127 + 106623 CTGTCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGCACCTGGGTCGGCTCTGGGATGCCGC-GCGG-GG-CCGGTGGGCGGCGGAGGGGCCAGTGGG--GACCCGGGGCAGGG-GCGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202406948 125 + 204787373 CTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG-GG-CCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGGGGCCAAG-GCAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13666 125 + 192460366 CTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG-GG-CCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGGGGCCAAG-GCAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489519 125 + 19675229 CTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG-GG-CCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGGGGCCAAG-GCAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421415 125 + 16847902 CTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG-GG-CCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGAGGCCAGG-GCAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 362864 127 - 91754291 CTGCCCTGTGTCATTAGGATCCCAGCTCCGCAGCCATTCCTCTAGTTGGGCCTGGGTCAGCTCTGGGATGCCGC---GG-GG-CCGGTGGGCTGCGGAGGGGCCGGTGGGCTGCGGAGGGGCCAGA-GCGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514159 125 - 1977891 CTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG-GG-CCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGGGGCCAGG-GCAGAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 852846 121 - 74750902 CCATCCTGTGTCAGTGGGATCCCAACTCTGCAGCCCTTCCTCTA-TTAGGCCTGG------TTTGGGATGCCAA---GGCCAGCTGGTGGGTGGCAGAGGCACCGGTGGG--GACCCAGGGCGGGGCGCGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396203 120 + 17725628 CCGTCCTGTGTCAGTGGGATCCCAGCTCTGCAGCCCTTCCTCTA-ACAGGCCTGG------TCTGGGATGCCAA---GG-CAGCCGGTGGGCGGCAGAGGCGCTGGTGGG--GACCTGGGGCTGGGCGCAGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 352869 119 - 6778120 CCGTCCTGCGTCAGTGGGATCCCAGCTCTGCAGTCCTTCCTCTA-TTAGGCCTGG------TTTGGGATGCCAA---GG-CA-CCGGTGGGTGGCAGAGGCGCTGGTGGG--GACCCAAGGCGGGGCGCGGAG i cebCap1.NW_016107444v1 I 15 C 0 e dasNov3.JH569502 3840912 321 + 6579706 I e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=408242.000000 s hg38.chr3_KI270779v1_alt 67297 91 + 205312 ACCCCTCC-CACTGCACA-TCCCACTGCCTGGGTATCTG--------GCCCCCAACCGGCCTGCC--CGCTGCTCCCACCTCCCATGGtgggtcgggggctga s panTro5.chr3 200051976 91 + 202621043 ACCCCTCC-CACTGCACA-TCCCACTGCCTGGGTATCTG--------GCCCCCAACCGGCCTGCC--CGCTGCTCCCACCTCCCATGGtgggtcgggggctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33590 91 + 190779 ACCCCTCC-CACTGCACA-TCCCACTGCCTGGGTATCTG--------GCCCCCAACCGGCCTGCC--CGCTGCTCCCACCTCCCATGGtgggtcaggggctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64262 91 + 106623 ACCCCTCC-CGCTGCACA-TCCCACTGCCTGGGTATCTG--------GCCCCCAACCGGCCTGCC--CGCTGCTCCCACCTCCCATGGTGGGTCGGGGGCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407073 84 + 204787373 ACCACTCC-CGCTGCACA-TCCCACTGCTTGGGCACCTG--------GCCCCCCGCAGGCCCGCC--CGCTGCTCCTGCCTCCCGTGGAGGGTCGG------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13791 84 + 192460366 ACCCCTCC-CGCTGCACA-TCCCACTGCTTGGGCACCTG--------GCCCCCTGCAGGCCCGCC--CGCTGCTCCCGCCTCCCGTGGAGGGTCGG------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489644 84 + 19675229 ACCCCTCC-CGCTGCACA-TCCCACTGCTTGGGCACCTG--------GCCCCCCGCAGGCCCGCC--CGCTGCTCCCGCCTCCCGTGGAGGGTCGG------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421540 84 + 16847902 ACCCCTCC-CGCTGCACA-TCCCACTGCTTGGGCACCTG--------gccccccgcaggcccgcc--cgctgcccccgcctcccgcGGAGGGTCGG------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 362991 84 - 91754291 GCCCCTCC-CACTCCACA-TCCCACTGCCTGGGCGTCTG--------GCCCCCGGCAGGCCCGCC--CGCTGCTCCCGCCTCCCGTGGAGGGTCGG------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514284 84 - 1977891 ACCCCTCC-CGCTGCACA-TCCCACTGCTTGGGCACCTG--------GCCCCCCGCAGGCCCGCC--CGCTGCTCCCTTCTCCCGCGGAGGGTTGG------- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 852967 81 - 74750902 AGCCTTCA-CGCT-CACA-TTCCACCGCCTGGGCGCCCA-------GGCTCCCCTCAGGCCCACC--TGCTGCTCCCACCTCCTGGGATGG--CG-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396323 84 + 17725628 AGCCTTGG-CGCTGCACA-TCCCACCGCCTGGGCACCCG-------TGCTCCCCGCAGGCCCACC--TGCTGCTCCCGTCCCCTGTGATGGTTTG-------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 352988 72 - 6778120 AGCCTTC----CTGCACA-TCCCACCACCTG----------------GCTCCCCGCAGGCCCACC--TGCTGCTCCCGCCCCCTGTGATGGTTCG-------- i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3841233 73 + 6579706 ACCCCTCCGCGCTGCACCTTCCCGCCGCCTGGGGGCGCGCTCCTAGGGTTTCCCGCCGGGAGGCCAATGCTGC------------------------------ i dasNov3.JH569502 I 321 C 0 e colAng1.NW_012118932v1 396695 1573 + 7796314 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=960598.000000 s hg38.chr3_KI270779v1_alt 67388 127 + 205312 gggctggggactggggcagggTACCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCGTGC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCAATTCTC----AGCCCCTTC s panTro5.chr3 200052067 127 + 202621043 gggctggggactggggcagggTACCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCGTGC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33681 127 + 190779 gggctggggactggggcagggTACCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCGTGC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64353 119 + 106623 GGACT--------GGGCAGGGTACCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCGTGC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407157 127 + 204787373 GGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 13875 127 + 192460366 GGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489728 127 + 19675229 GGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421624 127 + 16847902 GGGCTGGGGACGGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTTACTTGCTATTCTC----AGCCCCTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 363075 127 - 91754291 GGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATACCCTCTCACTTGCTATTCTC----AGCCCCTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514368 127 - 1977891 GGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTC----AGCCCCTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 398281 114 + 7796314 GGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCGTCCGACCAATAACC-------------TCTC----AGCCCCTTC i colAng1.NW_012118932v1 M 1573 C 0 s calJac3.chr17 853048 126 - 74750902 GGGCTGGGG-TTGGGGCTGGGTACCCCAAATATCTCTCAGTGGTGATCACTCAGCCCCTCC---AATCCATCCAGCTCCTGCA-TTGTCCATCCTACCAATAACTTCTCGCTTGCTATTCTC----AGCCCCTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396407 127 + 17725628 GGGCTGGGGATTGGGGCTGGGTACCCCAAATATCTCTCAGTGCAGATCACTCAGCCCCTCC---AGTCCATCCAGCTCCTGCA-TTGTCCATCCTGCCAATAACCTCTCAATTGCGAGTCTC----AGCCCCTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 353060 127 - 6778120 GGGCTGGGGATTGGGGCTGGGTACCCCAAATATCTCTCAGTGGCGATCACTCAGCCCCTCC---AGTCCATCCAGCTCCTGTG-TTGTCCATCCTGCCAATAACCTCTGGCTTGCGATTCTC----AGCCCCTTC i cebCap1.NW_016107444v1 C 0 I 14 s dasNov3.JH569502 3841306 131 + 6579706 -GCCCCCGGAGCGAGGC---GTACGCTAATAATATATCTGTAGTTGTCCTGCAGTCCCCTCCTGAATCTTTCCTGTCCAGTTATTTGCATGCTCTCCTGTCAGCCACTCACTTGGCATTATCCTCAAGCCCCTTC i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=238762.000000 s hg38.chr3_KI270779v1_alt 67515 38 + 205312 CTGCATTGTCTCCCTGTGAGACCTACTAGAACCC-CCGC s panTro5.chr3 200052194 38 + 202621043 CTGCATTGTCTCCCTGTGAGACCTACTAGAACCC-CCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33808 38 + 190779 CTGCATTGTCTCCCTGTGAGACCTACTAGAACCC-CCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64472 38 + 106623 CTGCATTGTCTCCCTGTGAGACCTACTAGAACCC-CCAC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407284 39 + 204787373 CTGCCTTGTCTCCCTGTGAGACCTACTGGAACCCCCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 14002 39 + 192460366 CTGCCTTGTCTCCCTGTGAGACCTACTGGAACCCCCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489855 39 + 19675229 CTGCCTTGTCTCCCTGTGAGACCTACTGGAACCCCCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421751 39 + 16847902 CTGCCTTGTCTCCCTGTGAGACCTACTGGAACCCCCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 363202 39 - 91754291 CTGCCTTGTCTCCCTGTGAGACCTGCTGGAACCCCCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514495 39 - 1977891 CTGCCTTGTCTCCCTGTGAGACCTACTGGAACCCCCCGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 398395 39 + 7796314 CTGCATCGTCTCCCTGTGAGACCTACTGGAACCCACCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853174 39 - 74750902 CTGCACTGTCTCCCTGTCAGACCTTCTAGAAACCCACAA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 396534 39 + 17725628 GTGCACTGTCTCCAGGTCAGACCTTCTAGAAACCCACAA i saiBol1.JH378146 C 0 I 1 s dasNov3.JH569502 3841437 39 + 6579706 CTGCCTTATACCTTTGTCAGACCTACAAGAAACCCCTAA i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 353187 14 - 6778120 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=230188.000000 s hg38.chr3_KI270779v1_alt 67553 35 + 205312 CTTTCACACTGC-TGACCTGCTGGGGGAAAATGCAC s panTro5.chr3 200052232 35 + 202621043 CTTTCACACTGC-TGACCTGCTGGGGGAAAATGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33846 35 + 190779 CTTTCACACCGC-TGACCTGCTGGGGGAAAATGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64510 35 + 106623 CTTTCACACCGC-TGACCTGCTGGGGGAAAATGCAC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407323 33 + 204787373 CTTTCACACCAC-TGACCAGCTGGAGGAAAACG--C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 14041 33 + 192460366 CTTTCACACCAC-TGACCAGCTGGAGGAAAACG--C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489894 33 + 19675229 CTTTCACACCAC-TGACCAGCTGGAGGAAAACG--C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421790 33 + 16847902 CTTTCACACCAC-TGACCAGCTGGAGGAAAACG--C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 363241 33 - 91754291 CTTTCACACCAC-TGACCAGCTGGAGGAAAACG--C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514534 33 - 1977891 CTTTCACACCAC-TGACCAGCTGGAGGAAAACG--C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 398434 33 + 7796314 CTTTCACACCAC-TGACCAGCTGGAGGAAAATG--C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853214 35 - 74750902 CTCTCACACCGC-TGACCTGCTGGAGAAAAACGCAC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 396574 35 + 17725628 CGTTCACACGGC-TGACCTGCTGGAGAAAAACGCAC i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 353201 35 - 6778120 CTTTCACACTGC-TGACCTGCTGGAGAAAAATGCAC i cebCap1.NW_016107444v1 I 14 I 128 s dasNov3.JH569502 3841476 36 + 6579706 CTTGCACTACACTTGGGATACTATAGAAATATGCAC i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=102758.000000 s hg38.chr3_KI270779v1_alt 67588 20 + 205312 AGAGGCAGAGACGAGGCCAC s panTro5.chr3 200052267 20 + 202621043 AGAGGCACAGACAAGGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33881 20 + 190779 AGAGGCACAGACGAGGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64545 20 + 106623 AGAGGCACAGACGAGGCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407356 20 + 204787373 AGAGGCACAGACTAGGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 14074 20 + 192460366 AGAGGCACAGACTAGGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489927 20 + 19675229 AGAGGCACAGACTAGGCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 421823 20 + 16847902 AGAGGCACCGACTAGGCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 363274 20 - 91754291 AGAGGCCCAGACTAGGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514567 20 - 1977891 AGAGGCACAGACTAGGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 398467 20 + 7796314 AGAGGCACAGCCTAGGCCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853249 14 - 74750902 CA------AGATTAGGTCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396609 19 + 17725628 CAAGACACAGATGAGGTCA- i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3841512 20 + 6579706 AAAGAGACAGATTAGTTCAC i dasNov3.JH569502 C 0 I 691 e cebCap1.NW_016107444v1 353236 128 - 6778120 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=13046.000000 s hg38.chr3_KI270779v1_alt 67608 3 + 205312 GCG s panTro5.chr3 200052287 3 + 202621043 GCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33901 3 + 190779 GCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64565 3 + 106623 GCG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407376 3 + 204787373 GTG i rheMac8.chr2 C 0 I 8 s macFas5.chr2 14094 3 + 192460366 GTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489947 3 + 19675229 GTG i macNem1.NW_012014355v1 C 0 I 8 s cerAty1.NW_012004056v1 421843 3 + 16847902 GTG i cerAty1.NW_012004056v1 C 0 I 8 s chlSab2.chr15 363294 3 - 91754291 GTG i chlSab2.chr15 C 0 I 8 s manLeu1.NW_012102020v1 514587 3 - 1977891 GTG i manLeu1.NW_012102020v1 C 0 I 8 s colAng1.NW_012118932v1 398487 3 + 7796314 GCG i colAng1.NW_012118932v1 C 0 I 8 s calJac3.chr17 853263 3 - 74750902 GCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396628 3 + 17725628 GCT i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3841532 691 + 6579706 I e cebCap1.NW_016107444v1 353236 128 - 6778120 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=40076.000000 s hg38.chr3_KI270779v1_alt 67611 49 + 205312 GGAGTCCTGATCTCTAA-CCCCAGCCGGTCTCAGGCCTTGCCGAGGCAAC s panTro5.chr3 200052290 49 + 202621043 CGAGTCCTGATCTCTAA-CCGCAGCCGGTCTCAGGCCTTGCCGAGGCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33904 49 + 190779 CGAGTCCTGATCTCTAA-CCCCAGCCGGTCTCAGGCCTTGCCGAGGCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64568 49 + 106623 CGAGTCCTGATCTCTAA-CCCCAGCCGGTCTCAGGCCTTGCCGAGGCAAC i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 14097 8 + 192460366 ------------CCTAA-CTG----------------------------- i macFas5.chr2 C 0 C 0 s calJac3.chr17 853266 46 - 74750902 CAAGTCCT-ACATCTAA-CCCCAGCAGGTCTCAGGCCTTGGTGAGGCA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396631 47 + 17725628 CAAGTCCT-ATATCTAACCCCCAGCAGGTCTCAGGCCTTGGTGAGGCA-- i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3841532 691 + 6579706 I e cebCap1.NW_016107444v1 353236 128 - 6778120 I e macNem1.NW_012014355v1 489950 8 + 19675229 I e colAng1.NW_012118932v1 398490 8 + 7796314 I e manLeu1.NW_012102020v1 514590 8 - 1977891 I e chlSab2.chr15 363297 8 - 91754291 I e cerAty1.NW_012004056v1 421846 8 + 16847902 I e rheMac8.chr2 202407379 8 + 204787373 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=461086.000000 s hg38.chr3_KI270779v1_alt 67660 104 + 205312 GCTGCTTCCCCAGACACtctccctttcccattc-------------------ttttttttttttttttttgagttggagtctcgctttgccacccagtctg-------gagtgcagcggcgcgatctcag s panTro5.chr3 200052339 102 + 202621043 GCTGCTTCCCCAGACACtctccctttcccattc---------------------ttttttttttttttttgagatggagtctcgctttgccacccagtctg-------gagtgcagcggcgcgatctcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 33953 105 + 190779 GCTGCTTCCCCAGacactctccctttcccattt------------------cttttttttttttttttttgagatggagtctcgctttgccacccagtctg-------gagtgcagcggcgcgatctcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64617 106 + 106623 GCTGCTTCCCCAGacactctccctttcccattc-----------------ttttttttttttttttttttgagatggcgtctcgctttgccacccagtctg-------gagtgcagcggcacgatctcag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407387 123 + 204787373 GCTGCTTCCCCAGACGCTCTCACTTTCCCATTCtttttttttttttttttttttttttttttttttttttgagatggagtctcgctctgccacccaggctg-------gagtgcagtggtgagatctcag i rheMac8.chr2 I 8 C 0 s macFas5.chr2 14105 123 + 192460366 GCTGCTTCCCCAGATGCTCTCACTTTCCCATTCtttttttttttttttttttttttttttttttttttttgagatggagtctcgctctgccacccaggctg-------gagtgcagtggtgagatctcag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 489958 108 + 19675229 GCTGCTTCCCCAGACGCTCTcactttcccattc--------------cttttttttttttttttttttttgaga-ggagtctcgctgtgtcgcccaggctg-------gagtgcagtggccggatctcgc i macNem1.NW_012014355v1 I 8 C 0 s cerAty1.NW_012004056v1 421854 104 + 16847902 GCTGCTT--CCAGACGCTCTCACTTTCCCAttc-----------------ttttttttttttttttttttgagatggagtctcgctctgccacccaggctg-------gagtacagtggtgagatctcag i cerAty1.NW_012004056v1 I 8 C 0 s chlSab2.chr15 363305 106 - 91754291 GCTGCTTCCCCGGACACTCTCACTTTCCCAttc-----------------ttttttttttttttttttttgagatggagtctcgctctgccacccaggctg-------gagtgcggtggtgcgatctcag i chlSab2.chr15 I 8 C 0 s manLeu1.NW_012102020v1 514598 100 - 1977891 GCTGCTTCCCCAGACGCTCTCACTTTCCC-----------------------tttcttttttttttttttgagatggagtctcgctctgccacccaggctg-------gagtgcagtggtgagatctcag i manLeu1.NW_012102020v1 I 8 C 0 s colAng1.NW_012118932v1 398498 112 + 7796314 GCTGCTTCCCCAGACACTCCCACTTTCCCATTC-----------ttttttttttttttttttttttttttgagatggagtctcgctctgccacccaggctg-------gagtgcagtggtgcaatctcag i colAng1.NW_012118932v1 I 8 C 0 s calJac3.chr17 853312 59 - 74750902 -----------------------------------------------------------------------agacggagtgtcactctgttgctcaggttggagtgcagagtgcagtggcgcgatctcac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396678 59 + 17725628 -----------------------------------------------------------------------agacggagtctcgctctgttgctcaggctggagtgcagagtgcagtggtgtgatctcac i saiBol1.JH378146 C 0 C 0 e dasNov3.JH569502 3841532 691 + 6579706 I e cebCap1.NW_016107444v1 353236 128 - 6778120 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=30394.000000 s hg38.chr3_KI270779v1_alt 67764 4 + 205312 ctca s panTro5.chr3 200052441 4 + 202621043 ctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 34058 4 + 190779 ctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64723 4 + 106623 ctca i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407510 4 + 204787373 ctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 14228 4 + 192460366 ctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 490066 4 + 19675229 acca i macNem1.NW_012014355v1 C 0 I 39 s cerAty1.NW_012004056v1 421958 4 + 16847902 ctca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 363411 4 - 91754291 ctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514698 4 - 1977891 ctca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 398610 4 + 7796314 ctca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853371 4 - 74750902 ctca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396737 4 + 17725628 ctca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 353364 4 - 6778120 ctca i cebCap1.NW_016107444v1 I 128 C 0 e dasNov3.JH569502 3841532 691 + 6579706 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=192875.000000 s hg38.chr3_KI270779v1_alt 67768 35 + 205312 ctgcaccctccacctcctgggttcaagcgattctc s panTro5.chr3 200052445 35 + 202621043 ctgcagcctccacctcctgggttcaagcgattctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 34062 35 + 190779 ctgcagcctccacctcctgggttcaagcgattctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64727 35 + 106623 ctgcaccctccacctcctgggttcaagcgattctc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407514 35 + 204787373 ttgcaacctccaccagctgagttcaactaattctc i rheMac8.chr2 C 0 I 19 s macFas5.chr2 14232 35 + 192460366 ttgcaacctccaccagctgggttcaactaattctc i macFas5.chr2 C 0 I 19 s cerAty1.NW_012004056v1 421962 35 + 16847902 ttgcaacctccacctgctgggttcaactaattctc i cerAty1.NW_012004056v1 C 0 I 19 s chlSab2.chr15 363415 35 - 91754291 ctgcagcctccacctgctgggttcaactaattctc i chlSab2.chr15 C 0 I 19 s manLeu1.NW_012102020v1 514702 35 - 1977891 ttgcaagctccacctgctgggttcaactaattctc i manLeu1.NW_012102020v1 C 0 I 19 s colAng1.NW_012118932v1 398614 35 + 7796314 ctgcaacctccacctcccgggttcaactgattctc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853375 35 - 74750902 ctgcagcctctgcctcccgagttcaagcgattttc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396741 35 + 17725628 ctgcagcctctgcctcctgggttcaagcgattttc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 353368 35 - 6778120 ctgcagcctctgcctcccgggttcaggcaattttc i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 3841532 691 + 6579706 I e macNem1.NW_012014355v1 490070 39 + 19675229 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=1311373.000000 s hg38.chr3_KI270779v1_alt 67803 189 + 205312 ctgcctcagcctcccaagtagctgggattacaggcacacaccaccatgcctggctaatttttgtatttttagtagagatggggttacaccatgtt-ggccaggctggtctcaaatgcccgacttcaggtgatccacccgcctcgagctcccaaagtgctgggattacaggcgtgagccatcgcgcctgcc s panTro5.chr3 200052480 189 + 202621043 ctgcctcagcctcccaagtagctgggattacaggcacacaccaccacgcccggctaatttttgtatttttagtagagatggggtttcaccatgtt-ggcctggctggtctcaaatgcccaacctcaggtgatccacccgcctcgggctcccaaagtgctgggattacaggcgtgagccatggtgcctgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 34097 189 + 190779 ctgcctcagcctcccaagtagctgggattacaggcacacaccaccacgcccggctaatttttgtatttttagtagagatggggtttcaccatgtt-ggccaggctggtctcaaatgcccaacctcaggtgatccacccgcctcgggctcccaaagtgctgggattacaggcgtgagccatggtgcctgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64762 189 + 106623 ctgcctcagcctcccaagtagctgggattacaggcacacgccaccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgtt-ggccaggcttgtctcaaatgcccaacctctggtgatccacccgcctcgggctcccaaagtgctgggattacaggcgtgagccatcgcgcctgcc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407568 189 + 204787373 ctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctaggttttgtatttttagtagagatggggtttcaccatgtt-agccaggctggtctcaaactcccaacctcaggtgatccgcctgcctcgggcttccgaagtgctgggattacaggcgtgagccactgtgcccggc i rheMac8.chr2 I 19 C 0 s macFas5.chr2 14286 189 + 192460366 ctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctaggttttgtatttttagtagagatggggtttcaccatgtt-agccaggctggtctcaaactcccaacctcaggtgatccgcctgcctcgggcttccgaagtgctgggattacaggcgtgagccactgtgcccggc i macFas5.chr2 I 19 C 0 s macNem1.NW_012014355v1 490109 182 + 19675229 ctgcctcagcctcccaagtagctgggattacacgcacaca-caccatgcccggctagg-tttgtatttttagtagagat--ggtttcaccatgttaagccag--tggtctc-aactcccaactcagggtgatccgcctg-ctcgggcttccgaagtgctgggattacaggcgtgagccaccgtgcccggc i macNem1.NW_012014355v1 I 39 C 0 s cerAty1.NW_012004056v1 422016 189 + 16847902 ctgcctcagcctcccaagtagctgggattacgcgcacacaccaccatgcccggctaggttttatatttttagtagagatggggtttcaccatgtt-ggccaggctggtctcaaactcccaacctcaggtgatccacctgcctcgggcttccgaagtgctgggattacaggcgtgagccaccgtgcccggc i cerAty1.NW_012004056v1 I 19 C 0 s chlSab2.chr15 363469 189 - 91754291 ctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctagtttttgtatttttagtagagacagggtttcaccatgtt-ggccaggctggtctcaaacgcccaacctcaggtgatccacccgcctcgggctcccaaagtgctgggattacaggcatgagcgaccgcgcccggc i chlSab2.chr15 I 19 C 0 s manLeu1.NW_012102020v1 514756 189 - 1977891 ctgcctcagcctcccaagtagctgggattatgcgcacacaccaccatgcccggctaggttttgtatttttagtagagatgaggtttcaccatgtt-ggtcaggctggtctcaaactcccaacctcaggtgatccacctgcctcgggcttccgaagtgctgggattacaggcgtaagccaccgtgcccggc i manLeu1.NW_012102020v1 I 19 C 0 s colAng1.NW_012118932v1 398649 189 + 7796314 ctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctagtttttgtatttttagtagagatggggtttcgccatgtt-ggccaggctggtctccaactcccaacctcaggtgatccacccgcctcgggctcccgaaatgctgggattacaggcgtgagcaaccgcgcccagc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853410 188 - 74750902 ctccctcagcccccagaatagctgggattacagacacccgccatcatgcctgactaatttttgtatttttc-tagagatgggatttcaccatgtt-ggccaggctggtcttgaactcctgacctcaggtgatctacctgcctcggcctcccaaagcgctgggattacagatgcgagccaccccgctcgac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396776 188 + 17725628 ctccctcagcctccagagtagctgggattacagacacctgccatcatgcccggctaaattttgcatttttc-tagagatgggatttcaccatgtt-ggccaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagcgctgggattacagatgcgagccaccccgctcagc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 353403 188 - 6778120 ctccctcagcctccggagtagctgggattacagacacctgccatcatgcccggctaagttttgtatttttc-tagagatgggatttcaccatgtt-ggccaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagcgctgggattacagatgcgagccaccccgctcggc i cebCap1.NW_016107444v1 C 0 C 0 e dasNov3.JH569502 3841532 691 + 6579706 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=3276982.000000 s hg38.chr3_KI270779v1_alt 67992 472 + 205312 tttactttcccattcttaacgcctcccgtttcagacctgtccccttttccccgcatttctgactg--tcacggcacatcacaaccagcagacagggct--tcccctatttcacaggagaaatagaagccatcagatgggacctccttcaaagtcctgccaccaaacctcagcatgtacctggacccacatgtatcctcttttcc-tttgggattgaattagagaggtgccgctcgaaacccgctcctgggtgggagtcttggctctatcagttatgcctcta---ttctgtatgtttaacctcgccctc------------gtaggggcataa--aac--agcattt-aaacaggatcaag--ctttccattttaaaactccatacactcccttaatttcatctcctcctccacctactgccccatgtctctccctcttcctggctaaacgtctcaaaaaagtgga-tacactttctgtcAACtcctaaacactcctcac s panTro5.chr3 200052669 472 + 202621043 cttactttcccattcttaacgcctcccgtttcagacctgtccccttttccccgcatttctgactg--tcacggcacatcacaaccagcagacagggct--tcccctatttcacaggagaaatagaagccatcagatgggacctccttcaaagtcctgcccccaaacctcagcatgtacctggacccacatgtatcctcttttcc-tttgggattgaattagagaggtgccgctcgaaacccgctcctgggtgggggtcttggctctatcagttatgcctcta---ttctgtatgtttaacctcaccctc------------gtaggggcataa--aac--agcattt-aaacaggatcaag--ctttccattttaaaactccatacactcccttaatttcatctcctcctccacctactgccccatgtctctccctcttcgtggctaaacgtctcaaaaaagtgga-tacactttctgtcaactcctaaacactcctcac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 34286 472 + 190779 cttactttcccattcttaatgcctcccgtttcagacctgtccccttttccccgcatttctgactg--tcacggcacatcacaaccagcagacagggct--tcccctatttcacaggagaaatagaagccatcagatgggacctccttcaaagtcctgccaccaaacctcagcatgtacctggacccacatgtatcctcttttcc-tttgggattgaattagagaggtgccactcgaaacccgctcctgggtgggagtcttggctctatcagttatgcctcta---ttctgtatgtttaacctcgccctc------------ataggggcataa--aac--agcgttt-aaacaggatcaag--ctttccattttaaaactccatacactcccttaatttcatctcctcctccacctactgccccatgtctctccctcttcgtggctaaacgtctcaaaaaagtgga-tacactttctgtcAACtcctaaacactcctcac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 64951 472 + 106623 cttactttcccattcttaatgcctcccgtttcagacctgtccccttttccccgcatttctgactg--tcacggcacatcacaaccagcagacagggct--tcccctatttcacaggagaaatagaagccatcagatgggacctccttcaaagtcctgctaccaaacctcagcatgtacctggacccacatgtatcctcttttcc-tttgggattgaattagagaggtgccgctcgaaacccgctcctgggtgggggtcttggctctatcagttatgcctcta---ttctgtatgtttaacctcgccctc------------gtaggggcataa--aac--agcattt-aaacaggatcaag--ctttccattttaaaactccatacactcccttaatttcatctcctcctccacctactgccccatgtctctccctcttcgtggctaaacgtctcaaaaacgtgga-tacactttctgtcaactcctaaacactcctcac i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202407757 460 + 204787373 ctcacttccccattcttaaggcctcccgtttcagacctgcccccttttccccgcattt----gtg--tcacggcacatcacaaccagcagacagggct--tccc--gtttcacaggagaaatagaagccatcggaccggacctccttcaaactcctgccaccaaagctcagcatgtccctggacccacgtgtttcctcttttcc-ttcgggattgaatt----aggtgccgcttgaaacccgctcctgggt-ggggtcttggctctatcagttatgcctcta---ttctgtatgtttcacctcgccctt------------gtaggggcataa--aac--agcgtttaaaacaggatcaag--cttcccattttaaaactcc-cacact-ccttaatttcatctccctctccacctactgccgcctgtctcttcctcttcatggctgaacttctcaaaaaagtgga-tacactttctgtcaactcctaaacgctcctcac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 14475 461 + 192460366 ctcacttccccattcttaaggcctcccgtttcagacctgcccccttttccccgcattt----ctg--tcacggcacatcacaaccagcagacagggct--tccc--gtttcacaggagaaatagaagccatcggacgggacctccttcaaactcctgccaccaaagctcagcatgtccctggacccacgtgtttcctcttttcc-ttcGGGATTGAATT----AGGTGCCGCTTGAAACCCGCTCCTGGGT-GGGGTCTTGGCTCTATCAGTTATGCCTCTA---TTCTGTATGTTTCACCTCGCCCTT------------GTAGGGGCATAA--AAC--AGCGTTTAAAACAGGATCAAG--CTtcccattttaaaactcc-cacgctcccttaatttcatctccctctccacctactgccgcctgtctcttcctcttcatggctgaacttctcaaaaaagtgga-tacactttctgtcaactcctaaacgctcctcac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 490291 461 + 19675229 ctcacttccccattcttaaggcctcccgtttcagacctgcccccttttccccgcattt----ctg--tcacggcacatcacaaccagcagacagggct--tccc--gtttcacaggagaaatagaagccatcggacgggacctccttcaaactcctgccaccaaagctcagcatgtccctggacccacgtgtttcctcttttcc-ttcgggattgaatt----aggtgccgcttgaaacccgctcctgggt-ggggtcttggctctatcagttatgcctcta---ttctgtatgtttcacctcgccctt------------gtaggggcataa--aac--agcgtttaaaacaggatcaag--cttcccattttaaaactcc-cacactcccttaatttcatctccctctccacctactgctgcctgtctcttcctcttcatggctgaacttctcaaaaaagtgga-tacactttctgtcaactcctaaacgctcctcac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 422205 464 + 16847902 ctcacttccccattcttaaggcctcccgtttcagacctgcccccttttccccgcattt----ctg--tcacagcacatcacaaccagcagacagggct--tccc--gtttcacaggagaaatagaagccatcagacgggacctccttcaaactcctgccaccaaagctcagcatgttcctggacccacgtgtttcctctttttc-ttcgggattgaatt----aggtgccgcttgaaacccgcttctgggtgggggtctaggctctatcagttatgcctcta---ttctgtatgtttcacctcgccctt------------gtaggggcataa--aacagagcgtttaaaacaggatcaag--cttcccattttaaaactcc-cacactcccttaatttcatctccccctccacctactgccgcctgtctcttcctcttcatggctgaacttctcaaaacagtgga-tacactttctgtcaactcctaaacgctcctcac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 363658 464 - 91754291 ctcacttccccattcttaaggcctcccatttcagacctgcccccttttccctgcattt----ctg--ttatggcacatcacaaccagcagacaggact--tccc--gtttcacaggagaaatagaagccatcggacgggacctccttcaaactcctgccaccaaagctcagcatctccctggacccacgtgtttcctcttttcc-tCTGGGATTGAATT----AGGTGCCGCTTGAAACCCGCTTCTAGGTGGGGGTCTTGGCTCTGTCAGTTATGCCTCTA---TTCTGTATGTTTAACCTCGCCCTT------------GTAGGGGCATAA--AACAGAGTGTTTAAAACAGGATCGAG--CTtcccattttaaaactccacacactcccttaacttcatctccccc-cgacctactgccgcctgcctcttcctcttcatgactgaacttctcaaaaaagtgga-tacactttctgtcaactcctaaacgctcctcac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 514945 461 - 1977891 ctcacttccccattcttaaggcctcccgtttcagacctgcccccttttccccgcattt----ctg--tca---cacatcacaaccagcagacagggct--tccc--gtttcacaggagaaatagaagccatcagacgggacctccttcaaactcctgccaccaaagctcagcatgtccctggacccacgtgtttcctcttttcc-ttcgggattgaatt----aggtgccgcttgaaacccgcttctgggtgggggtctaggctctatcagttatgcctcta---ctctgtatgtttaacctcgccctt------------gtaggggcataa--aacagagcgtttaaaacaggatcaag--cttcccattctaaaactcc-cacactcccttaatttcatctccccctccacctactgccgcctgtctgttcctcttcatggccgaacttctcaaaaaagtggg-tacactttctgtcaactcctaaacgctcctcac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 398838 461 + 7796314 ctcactttcccattcttaaggcctcccgtttcagacctgtcccc-tttccctgcattt----ctg--tcacggcacatcacaaccagcagacagggct--tccg--gtttcacaggagaaatagaagctgtcggacgggacctccttcaaactcctgccgccaaagctcagcatgttcctggacccacgtgtttcctcttttcc-tttgggattgaatt----aggtgccgcctgaaacccgctcctggtg-ggggtcttggctctatcagtgatgcctcta---ttctgtgtgtttaaccttgccctt------------gtaggggcagaa--aacagagcatttaaaacaggatcaag--cttcccgttttaaaactccacacactcccttaatttcatctcctcctccacctactgc--cccgtctcttcctcttcatggctaaacttctcaaaaaagtgga-tacactttctgtcaactcctaaacgctcctcat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 853598 477 - 74750902 cT--ctttcccattcttaacg------gtttcagacctgtccccttctctccacatccctgactg--tcactgcacatcacaaccagcacagagggcc--tcccatgtttcacaggagaagtagaagctaccggatgggaccaccttcaaagtcctgccaccaaacctcagcg-gtacatggacccacatgtatcctttttttc--ctgtgattGAATTAGAGTGATGCTGGTTGAAA-CCACTCCTGGGTGGGGGTCTTGGCTCTATCAGTTATGTCTCCA---TTCTGCATATTTAACCTCGCCCTCAAGGGAAAGGGAGCAGGGACATAA--AACAGAGCATTTAAAACAGGATCAAG-tttttccattttaaaactccatacgttcccttaatttcatctcctcctgcacctacggccccatgtctgttcctcttcatggctaaacttctcacaaaagcaga-tacactttctgtcaactcctaaacactcctcac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 396964 464 + 17725628 cTCCCTTTTCCATTTTTAACG------GTTTCAGACCTGTCCCCTTCTCTCCTCATCCCTGACTG--TCACTGCACATCACAACCAGCACACAGGGTC--TCCCCTGTTTCACAGGAGAAATAGAAGCTATCGGACGGGACCACCTTCAAA-TCCTGCCCCCAAACCTCAGCA-GTACGTGGACCCCCATGTATCCTTTTTTCCCTCTGTGATTGAA---------------TTGGAA-CCGCTCCTGGGT-GAGGTCTTGGCTGTATCAGTGATGTCTCCA---TTCTGCATATTTAACCTCACCCTCAAGGGAAAGGGAGCAGGGACATAC--AACAGAGCCTTTAAAGCAGGATCAAG-tttttccattttaaaactccataggttcccttaatttgatctcttccggcacctacggccccatgtctcttcctcttcatggctaaacgtctcaaaaaagcgga-cacactttccgtcaactcctaaacactcctcac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 353591 475 - 6778120 ctcgctttctcattcttaacg------gtttcagacctgtccccttctctccacatccctgactg--tcactgcacatcacaaccagcacacagggcc--tctc--gtttcacaggagaaatagaagctatcgcacgggaccgccttcaaagtcctgccaccaaacctGAGCA-GTACGTGGACACACATGTACCCTTTTGTTCCCCTGTGATTGAACTGGAGTGGTGCCTCTTGGAA-CCACGCTTGGGT-GGGGTGTTGGCTCTATCAGTCATGTCTCCA---TTCTGCATTTAAAACCTCGCCCCCAAGGGAAAAGGAGCAGGAACATAA-----AGAGCATTTAAAACAGGATCAAG-Gttttccattttaaaactccatgcgctgccttaatttcctctcctcctgcacctgcggccccacgtctcttcctcttcatggctgaacgtctcaaaagagtgga-cacactttgcgtcaacccctgaacactcctcac i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3842223 460 + 6579706 tccactttcccattctccatgtggactattcccaacctttctcccttgccctgaatctctaaccgtatcactgccccttactatcagt-gactgatttcattccctacctcacagaggaaatagaaaccatcacaagggaactccttcagtgtcccgccaccaaacatcaatacacatctgcac-cacatccgtccttt------------------------aagtgacccttgaagccctctccct----gagatcctggccctctcagttatgcttctattcttctgtatgtttaacttcaccctcaagggaaagtgagtagaggcataactgatagagcatttaaaacaggcgaaaagtttccccatcttaaaactccacaacctctct----------tccctctccagctattgtcctatgtctcttcctcctcacagctaaacttcttgaaaaagttgaccacaatttctgtcaactattaaatactactcac i dasNov3.JH569502 I 691 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=1590493.000000 s hg38.chr3_KI270779v1_alt 68464 195 + 205312 gctcatttggcctctgctcctcccttcctcctcccacttcattggaactacttctgccaaagaggatccctgagtc--agcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttgggga--c- s panTro5.chr3 200053141 195 + 202621043 gctcacttggcctctgcttctaccttcctcctcccacttcattggaactacttctgccaaagaggatccctgagtc--atcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttgggga--c- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 34758 195 + 190779 gctcatttggcctctgctcccaccttcctcctcccacttcattggaactacttctgccaaaggggatccctgagac--atcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttgggga--c- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 65423 195 + 106623 gctcactTGGCCTCTGCTCCTACcttcctcctcccacttcattggaactacttctgccaaagaggatccctgagac--atcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttgggga--c- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120806756 195 + 123690457 GCTCACTTGGCCTTTGCTCCTACCTTCCTCCTCCCACTTCATTGGAACTACTTCTGCCAAAGAGGATCCCTGAAAC--ATCCTGACTGGTAACCCCAGTGGACTCTACTCGATATGCAACGTCCTTCACTTCTTAGCAGAGTTTGAAACAGCCTGactctcctcttctggcaacattcttttccttggtgcgggga--t- i nomLeu3.chr11 I 10 C 0 s rheMac8.chr2 202408217 191 + 204787373 actcccttggcctctgctcctaccttcctcctcccacttcacgggaactacttgtgccaaagaggatccctgagac--gtcctgactggtaaccccagtggactctactcaacacgccacgtccttcacttctt---agagtttgaaatagcctgaccctcctcttccggcgacaatcttttccttggtttgggga---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 14936 191 + 192460366 actcccttggcctctgctcctaccttcctcctcccacttcacgggaactacttgtgccaaagaggatccctgagac--gtcctgactggtaaccccagtggactctactcaacacgccacgtccttcacttctt---agagtttgaaacagcctgaccctcctcttccggcgacaatcttttccttggtttgggga---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 490752 191 + 19675229 actcccttggcctctgctcctaccttcctcctcccacttcacgggaactacttgtgccaaagaggatccctgagac--gtcctgactggtaaccccagtggactctactcaacacgccacgtccttcacttctt---agagtttgaaacagcctgaccctcctcttccggcgacagtcttttccttggtttgggga---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 422669 195 + 16847902 gctcccttggcctctgctcctaccttcctcctcccacttcacgggaactacttctgccaaagaggatccctgagac--gtcctgactggtaaccccagtggactctactgaacacgccacgtccttcacttcttagcagagtttgaaacagcctgaccctcctcttccggcgacaatcttttccttggtttGGGGAC--- i cerAty1.NW_012004056v1 C 0 I 5020 s chlSab2.chr15 364122 194 - 91754291 gctccctgggcctctgctcccaccttcctcctcccacttcactggaacaacttctgccaaagtggatccctgagac--gtcctgactggtaaccccaatggactctactcaacacgccacgtccttcacttcgtagcagagttggaaacagcctgaccctcctcttccggcgacattcttttccttggtttgggga---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 515406 191 - 1977891 gctcccttggcctctgctcctaccttcctcctcccacttcacgggaactacttctgccagagaggatccctgagac--gtcctgactggtaaccccagtggactctactgaacacgccacgtccttcgcttctt---agagtttgaaacagcctgaccctccccttccggcgacagtcttttcctcggtttgggga---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 399299 195 + 7796314 gctcccttggcctctgctcctaccttcctcctcccacttcactggaactacttctgccaaagaggatccctgagat--gtcctgactggtaaccccaatggactctactcaatgtgccacgtccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttgggga-t-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 854075 193 - 74750902 gctcacttggcctctgcccctaccttcccactcccacttcactggaactgcttctgccaaaggggatcctggtagc--atgaggactggtaaccccagcaggctctgctccatatgcaacttccttcacttcttagcagagtttggagcagct-gactctcctcttcttgagacactcttttccttgattccggga---- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 397428 194 + 17725628 gctcacttgacctctgccccgaccttccgactcccacttcactggaactacttctgccaaagggggtcctggtaac--atgctgaccggtaaccccagtggactctactccacgtgcaacttccttaacttcttagcagactttgaagcagccggactctcctcttcttgtgacattctttgccttgattccagga---- i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 354066 194 - 6778120 gctcacttggcctccacccctaccttcctagtcccacttcactggaactgcttctgccaaagggggtcccggtaac--gtgctgactggtaaccccaatggactctacgccgtgtgcaacttcctcaacttcttagcagggtttgaagcagccggactctccttgtcttgcaacattcttttccttgattccggga---- i cebCap1.NW_016107444v1 C 0 I 1 s dasNov3.JH569502 3842683 182 + 6579706 --ttcgttgtaatttgac-------ttccattcccactccactggaactactttggcc--agaggtttcctgtggccagtacagactggtcactccaaaggagtctcctcagtatgtatcttctttaacgtcttagtg----ttgaaacaacctaactaccatcttcttgcaacactcttctccttgattccctgc---t i dasNov3.JH569502 C 0 C 0 a score=3612187.000000 s hg38.chr3_KI270779v1_alt 68659 499 + 205312 gctgtactgttctggttttgcccctccctcCGAGCA---------------------------------------TTCCTTGTG--TTTgt----cctggcccattttctcctctcattctacatcctctccccgg-ggattttagcttctctcacggctcaggttaccatctccatagtgatgactatcaaattctgtacctcatttccagaggctcctga----cagacttgcttggtcaatatactactggacatattcatgagactgtctcacacaggcatctcgaacccagtgt----gtcccac--aattctcttcctatccatgcctgttcctcttccactgcctcatatgtcggtgactg--tccaccttctctctctctccccct-----------ctccgtttggctcataggaaaagtgtcaccaagggctgtaagtgcagatttctaattatcccctaaatttgaacatttttcctctcgaaagtgtatggccattaccctattacagatcaacatcttcaatcactg-gaatgatggcaataatctaattgggttc s panTro5.chr3 200053336 527 + 202621043 gctgtactgttctggttttgcccctccctctgagcaccc---cctcctgt---gttcagccctt-tatgtcggggttccttgtg--tttgt----cctggcccattttctcctctcattctacatcctctccccgg-ggattttagcttctctcacggctcaggttaccatctccatagtgatgactatcaaattctgtacctcatttccagaggctcctga----cagacttgattggtcaatatattactggacatattcatgagactgtctcacacaggcatctcgaacccaatgt----gtcccacataattctctt------catgcctgttcctcttccactgcctcatacgtcggtgactg--tccaccttctctctctctccccct-----------ctccatttggctcataggaaaagtgtcaccaagggctgtaagtgcagatttctaattaccccctaaatttgaacatttttcccctcgaaagtgtatggccattaccctattacagatcaacatcttctatcactc-gaatgatggcagtaatctaattgggttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 34953 533 + 190779 gctgtactgttctggttttgcccctccctctGAGCAccc---cctcctgt---gttcagccctt-tatatcggggttccttgtg--tttgt----cctggcccattttctcctctcattctacatcctctccccgg-ggattttagcttctctcacggctcaggttaccatctccatagtgatgactatcaaattctgtacctcatttccagaggctcctga----cagacttgcttggtcaatatattactggacatattcatgagactgtctcacacaggcatctcgaacccaatgt----gtcccacataattctcttcctatccatgcctgttcctcttccactgcctcatatgtcggtgactg--tccaccttctctctctctccccct-----------ctccgtttggctcataggaaaagtgtcaccaagggctgtaagtgcagatttctaattaccccctaaatttgaacatttttcccctcgaaagtgtatggccattaccctattacagatcaacatcttctatcactc-gaatgatggcagtaatctaattgggttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 65618 533 + 106623 gctgtactgttctggttttgcccctccctctGAGCACCC---CCTCCTGT---GATCAGCCCTT-TATGTCGGCATTCCTTGTG--TTTgt----cctggcccattttctcctctctttctacatcctctccccgg-ggattttagcttctctcacggctcaggcttccatctccatagtgatgactatcaaattctgtacctcatttccagaggctcctga----cagacttgcttggtcaatatgttactggacatattcatgagactgtctcacacaggcatctcgaacccaatgt----gtcccacataattctcttcttatccatgcctgttcctcttccactgcctcatatgtcggtgactg--tccaccttctctctctctccccct-----------ctccgtttggctcataggaaaagtgtcaccaagggctgtaagtgcagatttctaattatcccctaaatttgaacatttttcccctcgaaagtgtatggccattaccctattacagatcaacatcttctatcactc-gaatgatggcaataatctaattgggttc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120806951 527 + 123690457 gct-tactgttctggttttgcccctccctctgagcaccc---cctcctct---gttcagccctt-tatgtcggcattccttgtg--tttgt----cctggcccattttctc--ctcgttctacatcctctgcccgg-ggattttagcttctctcatggctcggggtaccatctccacagtgatgactatcaaattctgtacctcatttccggaggctcctga----cagacttgcttgctcaatatattactagacatattcatgagactg--tcacacaggcgtgtcgaacccaatgt----gtcccacataattctcttcctgtccat-cctgttcctcttccactgcctcatacgtcggtgactg--tccaccttctctctctctccccct-----------ctctgtttggctcataggaaaagtgtcaccacgggctgtaagtgcagatttctaattatcccctaaatttgaacatttttcccctctaaagtgtatggccattaccctattacagatcaacatcttctatcactc-gaatgatggcaataatctaattgggttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202408408 529 + 204787373 -ctgtacatctctggttctg-ccctccctctgagcgccc---cctcctct---gttcagccctt-tatgtcggcattgcttgtg--tctgt----cctggcccattttctcctctcgttctacatc--ctccccag-ggactttagctcctctcatggctcgggtcacaagctccgcagtgatgacaaccaaattctgtacctcatttcccgaggctcctga----cggactcgcctggtcaatacattactggacacattcatgagactgtctcacacaggcctctcaaacccagtgt----gtcccaggtaattctcttcctgtccgtgcctgttcctcttccactgcctcctacgtcagtggctg--tccgccttctctctctctccacct-----------ctacatttggctcataggaaaagtgtcaccaagggctgtgggtgcagatttctcattatcccctaagtttgaacatttttcccctctaaagtgtatgaccattaccctattacagatcaacatcatctatcactc-gaatgactgcaataatctaactgggttc i rheMac8.chr2 C 0 I 2559 s macFas5.chr2 15127 529 + 192460366 -ctgtacatctctggttctg-ccctccctctgagcgccc---cctcctct---gttcagccctt-tatgtcggcattgcttgtg--tctgt----cctggcccattttctcctctcgttctacatc--ctccccgg-ggactttagctcctctcatggctcgggtcaccagctccgcagtgatgacaaccaaattctgtacctcatttcccgaggctcctga----cggactcgcctggtcaatacgttactggacacattcatgagactgtctcacacaggcctctcaaacccagtgt----gtcccaggtaattctcttcctgtccgtgcctgttcctcttccactgcctcctacgtcagtggctg--tccgccttctctctctctccacct-----------ctacatttggctcataggaaaagtgtcaccaagggctgtgggtgcagatttctcattatcccctaagtttgaacatttttcccctctaaagtgtatgaccattaccctattacagatcaacatcttctatcactc-gaatgactgcaataatctaactgggttc i macFas5.chr2 C 0 I 2558 s macNem1.NW_012014355v1 490943 529 + 19675229 -ctgtacatctctggttctg-ccctccctctgagcgccc---cctcctct---gttcagccctt-tatgtcggcattgcttgtg--tctgt----cctggcccattttctcctctcgttctacatc--ctccccgg-ggactttagctcctctcatggctcgggtcaccagctctgcagtgatgacaaccaaattctgtacctcatttcccgaggctcctga----cggactcgcctggtcaatacgttactggacacattcatgagactgtctcacacaggcctctcaaacccagtgt----gtcccaggtaattctcttcctgtccgtgcctgttcctcttccactgcctcctacgtcagtggctg--tccgccttctctctctctccacct-----------ctacatttggctcataggaaaagtgtcaccaagggctgtgggtgcagatttctcattatcccctaagtttgaacatttttcccctctaaagtgtatgaccattaccctattacagatcaacatcttctatcactc-gaatgactgcaataatctaactgggttc i macNem1.NW_012014355v1 C 0 I 2596 s chlSab2.chr15 364316 529 - 91754291 -ctgtacatctctggttctg-ccctccctctgagcgccc---cctcctct---gttcagccctt-tatgtcggcattgcttgtg--tctgt----cctggcccattttctcctctcattcttcatcctctccccgg-ggactttagctcctctcatggctcgggtcaccagctccgcagtgatgactaccaaattctgtacctcatttcccgaggctcctga----cagacttgcctggtcgatacgttactggacatattcacgagactgtctcacacaggcctgtcaaacccagtgt----gtcccagataattctcttcctgtccgtgcctgttcctcgtccactgccccatACGTCAGTGGCTG--TCCGCCT--TCTCTCTCTGCCCCT-----------CTACATTTGGCTCATAGGAAAAGTGTCACCAAGGGCTGTGGGTGCAGATTTATCATtatcccctaagtttgaacatttttcccctctaaagtgtatggccattaccctagtgcagatcaacatcttctatcactc-gaatgacggcaataatctaactgggttc i chlSab2.chr15 C 0 I 2237 s manLeu1.NW_012102020v1 515597 529 - 1977891 -ctgtacatctctggtgctg-ccctccctctgggcgccc---cctcctct---gttcagccctt-tatgtccgcattgcttgtg--tctgt----cctggcccattttctcctctcgttctacatc--ctccccgg-ggactttagctcctctcatggctcgggtcaccagctccgcagtgatgacaaccaaattctgtacctcatttcccgaggctcctga----cggactcgcctggtcaatacgttactggacatattcatgagactgtctcacgcaggcctctcaaacccagtgt----gtcccaggtaattctcttcctgtccgtgcctgttcctcttccactgcctcctacgtcagtggctg--tccgccttctctctctctccctct-----------ctacatttggctcctaggaaaagtgtcaccaagggctgtgggtgcagatttctcattatcccctaagtgtgaacattttttccctctaaagtgtatggccattaccctattacagatcaacatgttctatcgctc-gaatgacggcaataatctaactgggttc i manLeu1.NW_012102020v1 C 0 I 2926 s colAng1.NW_012118932v1 399494 527 + 7796314 gtcgtacatctctggttctgcccctcccgctga--ggcc---cctcctct---gttcagccctt-tatgtcggcattgcttgtg--tctgt----cctggcccgccttctcctctcgttctacaccctctcccggg-ggactttagcgtctctcatggctcgggtcaccagctccacggtgatgactaccaaattctgtacctcatttcctgaggctcccga----cagacttgcctggtcaatacgttactggacatattcatgagactgtctcacacaggcccctcaaacccagtgt-----tctcagataattctcttcctctccatgcctgttcctcttccactgcctcatacgtcagtggctg--tccgccc--cctctctctccccct-----------ctacatttggctcataggaaaagtgtcaccaagggctgtgagtgcagatttctcattatcccctaaatttgaacattcttcccctctaaagtgtgtggccattaccctattacagatcaacatcttctatcact--gaatgacagcaataatctaattgggttc i colAng1.NW_012118932v1 C 0 I 2213 s calJac3.chr17 854269 536 - 74750902 actgtacttttctggtttcgcccctccctctgagcttcccctcctcctct---gtccagcccttaaatgttggcattccttgtg--tctgtgtgtcctgggccatttcctcctctcagtctacatactctccccag-ggatgttagctcctcttaaggctccgcttaccagctccatagtgatcactgccaaatgctgtacttcatttcc-gatgctcctgt----cagac----------------ttactggacatattcatgaaactgtctcacacaggcatctcgaacccaatgt----gtcccaaataattctcttcctgtccatgcctcttcctcttccactgcctcatatgtcggtgactgtatccaccttctctctctcccccctggcttttttttttttttttttgctcataagaaaagtatcaccaagtgctgtaagtgcagatttctaattatcccctaaatttaaacatttt-ccccccaaaaatgtatggtcattaccctattacagatcaacatcatccatcactt-gaatgatggcaataatctaattgggttc i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 397623 525 + 17725628 actgtgcttttctggtttcagccctccctcggagcttcc---cctcctct---gtccagcccttaggtgtcggtattccttgtg--tctgtgtgtgctgggccatttcctcctctcattctacaaactctccccag-ggctttcagctcctctta-------------cggctccatagtgatgacagccaaatgctgtagttcatttct-gatgctcccat----cagactcgcttcgtcaatacattactggacatattcatgaaactgtctcacacaggcgtctcgaacccagtgt----gtcccaaataattctcatcctgtccccgcctctccctcttccactgcctcataggtcagtgactgcatccaccttctctctctctccccag-----------cttttttttgctcacaggaaaagtatcaccaagtgctgtaagtgcagatgtctaattatcccctaaatttaaacatttt-tccccctaaaatgtatggccattaccctattacagatcaacatcatctatcactc-caatgacggcaataatctaattgggttc i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 354261 500 - 6778120 actgtgcttttctggtttcggccctccctctgggcttcc-ctcctcctct---gcccagcccttaaatgtcggcattccttgtg--tctgtgcgcgctgggccatttcctcctctcattctacacactctgcccag-ggct-ttagcccctcgta-------------cggctccatagtgatgacggccaaatgctgcacttc--------atgctcccgt----cagac----------------ttgctggacatattcacgaaactgtcccacacaggcatctcgaacc--gtgt----gtcccaaataa-tctcttccggtccatgcctctccttcttccactgcctcatatgtcagtgactgtatccaccttctctctctctccccgg----------ctttttttttgctcacaggaaaagtatcaccaggtgctgtaagtgcagatttctaattatcccctaaatttaaacatttt--ccccctaaaatgtatggccattaccctattgcagatcaacatcatctatcactc-aaatgatggcagtaatctaattgggttc i cebCap1.NW_016107444v1 I 1 C 0 s dasNov3.JH569502 3842865 533 + 6579706 gctgtgcccttctattttca-cccccatgattagctgtt---cctcctgttcagtctgtcccttgaacattgccatttcttgtgtttctat----cttggactgtttactcttcttactctacatactctctctggtggatttcagctactc-catgggtctggat-ccatctatatatggatggttaccaaaatctatacttcattccaacatgctcctgaacttcaggtttggatggccaacacatgactggacatattgatgaggtcatctcaccctgtcctttcaagctcagtgtcctgatccaatctaattctattccctcccaaattcattcctcttccaatgtcccatg----attgtcca--cccaccttctttctctctccccct----------------ttctgctcatgggcaagtcattgccaagtgttgtaaatgcaattttcaaaatatctcttaaatctg-acattttttctct---atgttgacagtcactatcctgttttagttcacaatcatctatcacttagaattatttcaataaactaacaggggtc i dasNov3.JH569502 C 0 C 0 e cerAty1.NW_012004056v1 422864 5020 + 16847902 I a score=665092.000000 s hg38.chr3_KI270779v1_alt 69158 274 + 205312 attttatcctctatc-taacaatgacaactcattgcctacacagcaggtagaagga-----------------gtttgttttcagaattgccctctgacctatttaagac-gctcagatattccctgaggctccttggcctggccacaaaggccctacacattctggctgcttcctcctttccagcatcctctctcacgtctcctctcctcagttccaccctcaggaggcaccagaattcctcacttctttgactacaaggcaccgtcttactcccaagaccAGTGAATCCGA s panTro5.chr3 200053863 274 + 202621043 attttatcctctatc-taacaatgacaactcattgtctacacagcaggtagaagga-----------------gtttgttttcagaattgccctctgacctatttaagac-gctcagatattccctgaggctccttggcatggccacaaaggccctacacattctggctgcttcctcctttccagcttcctctctcacgtctcctctcctcaattccaccctcaggaggtactagaattcctcacttctttgactacaaggcaccgtcttactcccaagaccAGTGAATCCGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 35486 274 + 190779 attttatcctctatc-taacaatgacaactcattgtctacacagcaggtagaagga-----------------gtttgttttcagaattgccctctgacctatttaagac-gctcagatattccctgaggctccttggcatggccacaaaggccctacacattctggctgcttcctcctttccagcatcctctctcacgtctcctctcctcaattccaccctcaggaggtactagaattcctcacttctttgactacaaggcaccgtcttactcccaaggccAGTGAATCCGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66151 274 + 106623 attttatcctctatc-taacaatgacaactcattgtctacacagcaggtagaagga-----------------gtttgttttcagaattgccctctgacctatttaagat-gctcagatattccctgaggctccttggcatggccacaaaggccctacacattctggctgcttcctcctttccagcatcctctctcacgtctcctctcctcaattccaccctcaggaggtactagaattcctcacttctttgactacaaggcaccgtcttactcccaagaccAGTGAATCTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120807478 273 + 123690457 gttttatcccctatcttaccaaagacaactcattgtctacacagcaggtagaagga-----------------atttgttttcagaattgccatctgacctatttaagat-gctcagatattccctgaggctccttggcatggccacaaaggccctacacattctggctgcatcctcctttccagcatcctctctcacgtctcctctcctcagttccaccctcaggagctactaaaattcctcacttctttgactacgaggcac--tcttactcccaagaccAGTGAATCCGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 854805 293 - 74750902 attatgtcccctatcttgccaattacaactcattctctacaccctggatagaaggattttttttttttttttttttttttttcagaattgccgtttgatctatttaagactgctcagatattccctgatgctccttggcatggccaaaaaggccctacacattctggccccatcttcctttccactgtcctccctcacttctcttctcctcaattcttccctcaggagatactagaatttcttaccttcttgattaccaggcactgtcttacttccaagaccACTGAATCCGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 398148 275 + 17725628 tttatatcccctatctaaccaattacaacacattctctacacagtggatagaagga-----------------attttttttcagacttgctgtttgatctgtttaagactgctcaggtattccccgatgctccttggcatggccaaaaaggccctacacattct-gtcccattttcctttccactgtcctctctcacttctcttctcctcaattctaccctcaggagatactagaattcctcacctttttgattaccaggcacggtctcacttccaagagcACTGAATCCGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 354761 276 - 6778120 attgtaacccctatcttaccagttacaactcattctctacacagtggatagaaggg-----------------attttttttcagacttgccatttgatctatttaagactgctcagatattccctgatgctccttggcatggccaaaaaggccctacatactctggccccatcttcctttccactgtcctctctcacttctcttctcctcaattctaccctcaagagatactagaattcctcacctttttgattaccaggcactgtcttacctccaagaccactgaatccga i cebCap1.NW_016107444v1 C 0 I 22 s dasNov3.JH569502 3843398 265 + 6579706 -----attttcttt--taccacttccaattcattctcttcacagtagctagaggaa-----------------a---gttttaaaaaataccatttgacctgtttaagacccttcagatattccttgatgttcattggtatggccagcaaggccct-ccctttctagccctgtcttcctttccacagtcttctcttacttctactttcctgaattttaccctcaagccatactgaaatgcttcacttccttgatcaccaggcattgtcttacctccaggactAGTTAATATGA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=33244.000000 s hg38.chr3_KI270779v1_alt 69432 23 + 205312 AGGTGGACCACCAgctgagggac- s panTro5.chr3 200054137 23 + 202621043 AGGTGGACCACCAGCTGAGGGAC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 35760 23 + 190779 AGGTGGACCACCAGCTGAGGGAC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66425 23 + 106623 AGGTGGCCCACCAGCTGAGGGAC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120807751 23 + 123690457 AGGTGgcccgccagctgagggac- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855098 22 - 74750902 -GGGTGCCTTCTAGCTCAGGGAC- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 398423 21 + 17725628 --GGTGCCTTCTAGCTCAGGGAC- i saiBol1.JH378146 C 0 I 1 s dasNov3.JH569502 3843663 24 + 6579706 AGATGGCCTGCAGActaagggatc i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 355037 22 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=189749.000000 s hg38.chr3_KI270779v1_alt 69455 73 + 205312 tagattccagactgaatagaacaactttccctgtctctccacataaagtgtgtttgtttttcctcttacaggt s panTro5.chr3 200054160 73 + 202621043 TAGATTCCAGACTGAATAGAACAACTTTCCCTGTCTCTCCACATAAAGTGTGTTTGTTTTTCCTCTTACAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 35783 73 + 190779 TAGATTCCAGACTGAATAGAACAACTTTCCCTGTCTCTCCACATAAAGTGTGTTTGTTTTTCCTCTTACAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66448 73 + 106623 TAGATTCCAGACTGAATAGAACAACTTTCCCTGTCTCTCCACATAAAGTGTGTTTGTTTTTCCTCTTACAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120807774 73 + 123690457 tagattccagattgaatagaacaactttccctgtctctccacatgaagtgcgtttgtttttcctcttacagat i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855121 73 - 74750902 TAGATTTTAGACTCAATATAACAACTTTTCCTGTCTCTCCACATGAGGTGCATTTGTTTTTCCTCTTAAAGGT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 398445 73 + 17725628 TAGATTTTAGACTTAATATAACAACTTTTCCTGTCTCTCCACATGAGGTGCATTTGTTTTTCCTCTCAAAGGT i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 355059 73 - 6778120 TAGATTTTAGACTTAATATAACAACTTTTCCTGTCTCTCCACATGAGGTGCATTTGTTTTTCCTCTTAAAGTT i cebCap1.NW_016107444v1 I 22 C 0 s dasNov3.JH569502 3843687 73 + 6579706 tagattctggacttactgtatcagcagtttccacctctccagaccagatgcagttgtttttcttcttaGAAGT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=441768.000000 s hg38.chr3_KI270779v1_alt 69528 181 + 205312 ttccttaatgacaacaaaaaagggagtaatcct--------------------------------------------------------------------------------------accca--cTG-TA----AGAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCATGACAGCCTGCTTTAGATGAAGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATGTCACACGTAATTGAAGGAAGAACAAGAAAACTATAGTAAA s panTro5.chr3 200054233 181 + 202621043 TTCCTTAACGACAACAAAAAAGGGAGTAATCCT--------------------------------------------------------------------------------------ACCTA--CTG-TA----AGAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCATGACAGCCTGGTTTAGATAAAGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATGTCGCACGTAATTGAAGGAAGAACAAGAAAACTATAGTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 35856 181 + 190779 TTCCTTAACGACAACAAAAAAGGGAGTAATCCT--------------------------------------------------------------------------------------ACCTA--CTG-TA----AGAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCATGACAGCCTGGTTTAGATAAAGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATGTCACACGTAATTGAAGGAAGAACAAGAAAACTATAGTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66521 181 + 106623 TTCGTTAATGACAACAAAAAAGGGAGTAATTCT--------------------------------------------------------------------------------------ACCTA--GTG-TA----AGAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCATGACAGCCTGGTTTAGATAAAGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATGTCGCACGTAATTGAAGGAAGAACAAGAAAACTATAGTAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120807847 181 + 123690457 ttccttaacgacaacaaaaaagggagtaatcct--------------------------------------------------------------------------------------accta--ctg-tc----aGagtcatgactcttgat--tgcagctgacagaaacccatgacagcctggtttagataaaGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATATCACACATAATTGAAGGAAGAACAAGAAAACTGTAGGAAA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855194 184 - 74750902 TTCCTTAAAAACAACAAAAAAGGTAGTAAAATT-------------------------------------------------------------------------------------AACCTG--CTGGTA----AGAGTCGTGACTCTTTTTGATGCAGCTGACGGAAACTCATGACAATCTGGTTTAGATAAAGGGGGAGAGGA-TATTGGAAGAATCTTTGCGTTGGGAATATTGCACATAATTGAAGGACGAACAAGAAAACTATAGGAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 398518 183 + 17725628 TTCCTTAACAACAACAAAAAAGGTAGTAAAATT-------------------------------------------------------------------------------------CACCTGTTTTATTA----AGagtcatgactctttat--tgcagctgacagaaacccatgacaacctggtttagataaaGGGGGAGAGGACTATTGGAAGAATCTTGGAGTTGGGACTATTGCACATAAT--AAGGAAGGGCAAGAAAACTATAGGAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 355132 182 - 6778120 TTCCTT---AACAACAAAAAAGGTAGTAAAATT-------------------------------------------------------------------------------------CACCTG--CTGTTA----GGagtcatgactctttctattgcagctggcagaaacccatgacaacctggtttagataaaGGGGGAGAGGACTACTGGAAGAATCTTGGAGTTGGGAATATTGCACAGAATTGAAGGAAGAACAAGAAAACTATCGGAAA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 369182 176 - 608964 TTCCTACCTGTCAATACAA-----GGTAACACT--------------------------------------------------------------------------------------ACCTA--TTATTA----AGagtcaaatctctttaggttgtaggtgacagtaacccatgccaaactagtttTGAT-AAGGGGGAGGGGGCTACTAGAAAAA-CCTGGGGTGGAGGCTCTCTGACATAAT-GAAGGAAGAACAAGAAAACTATAGGAAA i otoGar3.GL873829 N 0 C 0 s dasNov3.JH569502 3843760 268 + 6579706 GTCCTT-ACAaaagaaagaaagagagagagaatgaaagagaagaaagagaaagaaggaaagaaggaaggaagaaaggaaggaagaaaggatggtaggaaggaaAGAGTTAACAGCAATCATCTG--TTA-CATAAGAGagacatgattcttttggttataggtgacagaaacctatgccaaattagtttatataaagaagggggagggtattgggagaatactgg----gggaatattttatgtaatcaaaagAAGAACAAAGAAACTACAGGGAA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=17967.000000 s hg38.chr3_KI270779v1_alt 69709 8 + 205312 GAACCCTG s panTro5.chr3 200054414 8 + 202621043 GAACCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36037 8 + 190779 GAACCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66702 8 + 106623 GAACCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808028 8 + 123690457 GAACCCTG i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 398701 7 + 17725628 GAACCCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 355314 8 - 6778120 GAACCCTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 369358 8 - 608964 GGACACTG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3844028 8 + 6579706 GGACACTA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855378 0 - 74750902 C e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=20315.000000 s hg38.chr3_KI270779v1_alt 69717 8 + 205312 GGGTGGTG s panTro5.chr3 200054422 8 + 202621043 GGGTGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36045 8 + 190779 GGGTGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66710 8 + 106623 GGGTGGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808036 8 + 123690457 GGGTGGTG i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 398708 8 + 17725628 GGGTGGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 355322 8 - 6778120 GGGTGGTA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 369366 8 - 608964 GGGTGGTG i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 3844036 0 + 6579706 C e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855378 0 - 74750902 C e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=9793.000000 s hg38.chr3_KI270779v1_alt 69725 6 + 205312 ATGTAG s panTro5.chr3 200054430 6 + 202621043 ATGTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36053 6 + 190779 ATGTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66718 6 + 106623 ATGTAG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 398716 6 + 17725628 ATATAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 355330 6 - 6778120 ATATAG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 369374 6 - 608964 GTGTAG i otoGar3.GL873829 C 0 I 2 e dasNov3.JH569502 3844036 0 + 6579706 C e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855378 0 - 74750902 C e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=24122.000000 s hg38.chr3_KI270779v1_alt 69731 19 + 205312 TCATGGGCCAAGTGTCCTG s panTro5.chr3 200054436 19 + 202621043 TCATGGGCCAAGTGTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36059 19 + 190779 TCATGGGCCAAGTGTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66724 19 + 106623 TCATGGGCCAAGTGTCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 398722 19 + 17725628 TAGTGGGCCAAGTGTCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 355336 19 - 6778120 CAGTGGGCCAAGTGTCCTG i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855378 0 - 74750902 C e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=2100.000000 s hg38.chr3_KI270779v1_alt 69750 1 + 205312 G s panTro5.chr3 200054455 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36078 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66743 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 855378 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 398741 1 + 17725628 G i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 355355 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 I 5 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=18142.000000 s hg38.chr3_KI270779v1_alt 69751 20 + 205312 AACCCTGGGGTGGTGATGTA s panTro5.chr3 200054456 20 + 202621043 AACCCTGGGGTGGTGATGTA i panTro5.chr3 C 0 T 62 s panPan2.chrUn_NW_014024201v1 36079 20 + 190779 AACCCTGGGGTGGTGATGTA i panPan2.chrUn_NW_014024201v1 C 0 T 62 s gorGor5.CYUI01000576v1 66744 20 + 106623 AACCCTGGGGTGGTGATGTA i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 855379 20 - 74750902 AACCCTGGGGTGGTAATATA i calJac3.chr17 C 0 C 0 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=1266.000000 s hg38.chr3_KI270779v1_alt 69771 20 + 205312 GTTGTGGGCCAAGTGTCCTG s gorGor5.CYUI01000576v1 66764 7 + 106623 GTTGTGG------------- i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 855399 20 - 74750902 GTAGTGGGCCAAGTGTCCTG i calJac3.chr17 C 0 C 0 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e cebCap1.NW_016107444v1 355356 5 - 6778120 I e panPan2.chrUn_NW_014024201v1 36099 62 + 190779 T e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C e panTro5.chr3 200054476 62 + 202621043 T a score=600.000000 s hg38.chr3_KI270779v1_alt 69791 1 + 205312 G s panTro5.chr3 200054414 1 + 202621043 G i panTro5.chr3 T 62 C 0 s panPan2.chrUn_NW_014024201v1 36037 1 + 190779 G i panPan2.chrUn_NW_014024201v1 T 62 C 0 s calJac3.chr17 855419 1 - 74750902 G i calJac3.chr17 C 0 T 42 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C e gorGor5.CYUI01000576v1 66771 0 + 106623 C a score=12120.000000 s hg38.chr3_KI270779v1_alt 69792 40 + 205312 AACCCTGGGGTGGTGATGTAGTCATGGGCCAAGTGTCCTG s panTro5.chr3 200054415 40 + 202621043 AACCCTGGGGTGGTGATGTAGTCATGGGCCAAGTGTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36038 40 + 190779 AACCCTGGGGTGGTGATGTAGTCATGGGCCAAGTGTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66771 12 + 106623 ----------------------------CCAAGCGTCCTG i gorGor5.CYUI01000576v1 C 0 C 0 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855420 42 - 74750902 T e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=10730.000000 s hg38.chr3_KI270779v1_alt 69832 11 + 205312 GAACCCTGGGG s panTro5.chr3 200054455 11 + 202621043 GAACCCTGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36078 11 + 190779 GAACCCTGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66783 11 + 106623 GAACCCTGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 855378 11 - 74750902 GAACCCTGGGG i calJac3.chr17 T 42 C 0 e otoGar3.GL873829 369380 2 - 608964 I e dasNov3.JH569502 3844036 0 + 6579706 C e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=13316.000000 s hg38.chr3_KI270779v1_alt 69843 13 + 205312 TGGTGATGTAGTT s panTro5.chr3 200054466 13 + 202621043 TGGTGATGTAGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36089 13 + 190779 TGGTGATGTAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66794 13 + 106623 TGGTGATGTAGTT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 855389 13 - 74750902 TGGTAATATAGTA i calJac3.chr17 C 0 C 0 s dasNov3.JH569502 3844036 13 + 6579706 TGGTGGTATAGAA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 369380 2 - 608964 I e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=14691.000000 s hg38.chr3_KI270779v1_alt 69856 9 + 205312 GTGGGCCAA s panTro5.chr3 200054479 9 + 202621043 GTGGGCCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36102 9 + 190779 GTGGGCCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66807 9 + 106623 GTGGGCCAA i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 855402 9 - 74750902 GTGGGCCAA i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 369382 9 - 608964 GTGAGCCAT i otoGar3.GL873829 I 2 C 0 s dasNov3.JH569502 3844049 9 + 6579706 GTAGGCTAA i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=34684.000000 s hg38.chr3_KI270779v1_alt 69865 16 + 205312 GTGTCCTGGGTTTTGG s panTro5.chr3 200054488 16 + 202621043 GTGTCCTGGGTTTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36111 16 + 190779 GTGTCCTGGGTTTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66816 16 + 106623 GTGTCCTGGGTTTTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808044 16 + 123690457 GTGTCCTAGGCTTTGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855411 14 - 74750902 GTGTCCTGGGCTTT-- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 369391 16 - 608964 GTGTCCTGGGCTTTGG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3844058 16 + 6579706 ATGTCCTGGGCTTTGG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 355356 5 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398742 5 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=91390.000000 s hg38.chr3_KI270779v1_alt 69881 27 + 205312 GTGGAGAAAGAGTCCCCT-AGATAAGTT s panTro5.chr3 200054504 27 + 202621043 GTGGAGAAAGAGTCCCCT-AGATAAGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36127 27 + 190779 GTGGAGAAAGAGTCCCCT-AGATAAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66832 27 + 106623 GTGGAGAAAGAGTCCCCT-AGATAAGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808060 27 + 123690457 GTGGAGAAAGAGTCCCCT-AGATAAGTT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855425 25 - 74750902 GTGGAG--AGAGTCCTCT-AGGTAAATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 398747 27 + 17725628 GTGGAGAAAGAGTCCCCT-AGATAAATT i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 355361 27 - 6778120 GTGGAGAAAGAGTCCCCT-AGATAAATT i cebCap1.NW_016107444v1 I 5 C 0 s otoGar3.GL873829 369407 27 - 608964 GTAGAGAAAGAGTCACCT-AGATGAGTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3844074 28 + 6579706 ATGGAGAAAGAATCCTCTGAGAGAAGTT i dasNov3.JH569502 C 0 I 11544 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=117079.000000 s hg38.chr3_KI270779v1_alt 69908 67 + 205312 Attaggtgggtgcaaaggtaattgcagtttttcccatta-ttttaattgcgaaaacagcaattacctt s panTro5.chr3 200054531 67 + 202621043 Attaggtggatgcaaaggtaatcgcagtttttcccatta-ttttaattgcaaaaacagcaattatctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36154 67 + 190779 Attaggtgggtgcaaaggtaatcgcagtttttcccatta-ttttaattgcaaaaacagcaattatctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66859 66 + 106623 Attaggtgg-tgcaaaggtaatcgcagtttttcccatta-ttttaattgcaaaaacagcaattacctt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808087 67 + 123690457 Attaggtgggtgcaaaggtaatcgcagtttttcccatta-ttttaattgcagaaacagcaattacctt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855450 68 - 74750902 Attaggttggcataagggtaattgcaatttttgccataaattttaattgcaaaaacagaaactacctt i calJac3.chr17 C 0 I 312 s saiBol1.JH378146 398774 68 + 17725628 Attaggtgggcgtaaaggtaagtgcaatttctgccataacttttaattgcagaaacagcaactacctt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 355388 68 - 6778120 Attaggtgggtataaaggtaattgcaatttttgccataacttttaattgcaaaaacagcaactacctt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 369434 1 - 608964 A------------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 3844102 11544 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=63407.000000 s hg38.chr3_KI270779v1_alt 69975 29 + 205312 tgcaccaacctgaTGGAGTCCCCCTTGCC- s panTro5.chr3 200054598 29 + 202621043 tgcaccaacctgaTGGAGTCCCCCCTGCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36221 29 + 190779 tgcaccaacctgaTGGAGTCCCCCCTGCC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66925 29 + 106623 tgcaccaacctgaTGGAGTCCCCCCTGCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808154 29 + 123690457 tgcaccaacctgaTGGAATCCCCCCTCCT- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855830 29 - 74750902 tgtaccaacctaaCAGAATCACCCCTGCC- i calJac3.chr17 I 312 I 1 s saiBol1.JH378146 398842 29 + 17725628 tgtaccaacctaaTGGAATCACCCCTGCC- i saiBol1.JH378146 C 0 I 1518 s cebCap1.NW_016107444v1 355456 29 - 6778120 tgtaccaacctaaCAGAATCACCCCTGCC- i cebCap1.NW_016107444v1 C 0 I 1 s otoGar3.GL873829 369435 15 - 608964 ---------------GAAACCCCCCTGCCT i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 3844102 11544 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=116780.000000 s hg38.chr3_KI270779v1_alt 70004 65 + 205312 ATGCTTCT-CTCTGTGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC s panTro5.chr3 200054627 65 + 202621043 ATGTTTCT-CTCTGTGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36250 65 + 190779 ATGTTTCT-CTCTGTGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 66954 65 + 106623 ATGCTTCT-CTCTGTGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808183 63 + 123690457 GTGCTTCT-CTC--TGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855860 67 - 74750902 GTGCATCTACTCTGTGAAAAACCCAAAGATAAAGTCAGCATGATAACCTCCACAGCACTC--TGTTTGC i calJac3.chr17 I 1 I 3886 s cebCap1.NW_016107444v1 355486 69 - 6778120 GTGCATCTACTCTGTGAAAAACCCCAGGCTGAAGTCCGCATGATAACATCCACAGGACTCTATGTTTGC i cebCap1.NW_016107444v1 I 1 I 4012 s otoGar3.GL873829 369450 64 - 608964 GTGCTTCTAGTATGTGCAAAGCCCCAAGCTGAAGTCAGCACGATCACATCCACAGAATCCTG-----GC i otoGar3.GL873829 C 0 C 0 e dasNov3.JH569502 3844102 11544 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=13022.000000 s hg38.chr3_KI270779v1_alt 70069 13 + 205312 AAAAGCCAGctta s panTro5.chr3 200054692 13 + 202621043 AAAAGCCAACTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 36315 13 + 190779 AAAAGCCAactta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 67019 13 + 106623 AAAAGCCAACATA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120808246 13 + 123690457 AAAAGCAGACTTA i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 369514 13 - 608964 AGAAGCAAACATA i otoGar3.GL873829 C 0 I 2904 e dasNov3.JH569502 3844102 11544 + 6579706 I e cebCap1.NW_016107444v1 355555 4012 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855927 3886 - 74750902 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=325817.000000 s hg38.chr3_KI270779v1_alt 70082 365 + 205312 gctatattacatgtataagcacattttttcaataagtcagccttagcttactgtaactttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaaacacatgttagcctagatccacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggggcaataacacacatggagctgtcatcgcctgtggtaacaatgccttctacagtacttcccaaagggcctgctagttcacttaattcttttatagagagaaggagtacactctaaaacactgatcaatagtatattatagtaaatacataaa s panTro5.chr3 200054705 365 + 202621043 GCTATATTACATGTATAAGCACATTTTTTCAATAAGTCAGCCTTAGCTTACTGTAACtttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaaacacatgttagcctagatccacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggggcaataacacacatggagctgtcatcgcctgtggtaacaatgccttctacagtacttcccaaagggcctgctagttcacttaattcttttatagttagaaggagtacactctaaaacactgatcaatagtacagtatagtaaatacataaa i panTro5.chr3 C 0 I 723 s panPan2.chrUn_NW_014024201v1 36328 365 + 190779 gctatattacatgtataagcacattttttcaataagtcagccttagcttactgtaactttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaaacacatgttagcctagatccacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggggcaataacacacatggagctgtcatcgcctgtggtaacaatgccttctacagtacttcccaaagggcctgctagttcacttaattcttttatagttagaaggagtacactctaaaacactgatcaatagtacagtatagtaaatacataaa i panPan2.chrUn_NW_014024201v1 C 0 I 189 s gorGor5.CYUI01000576v1 67032 359 + 106623 GCTATATTACATGTATAAGCACAttttttcaataagttagccttagcttactgtaactt------tttataaactttgtattttaactttttaaacttttttgttgaaagctaagacacaaaaacacatgttagcctagatccacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggggcaataacacacatggagctgtcatcgcctgtggtaacaatgccttctacagtacttcccaaagggcctgctagttcacttaattcttttatagttagaaggagtacactctaaaacactgatcaatagtatagtatagtaaatacataaa i gorGor5.CYUI01000576v1 C 0 I 63 s nomLeu3.chr11 120808259 363 + 123690457 GCTGTATTACATGTATAAGCACAttttttcaataagtcaaccttagcttactgtaactttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaagcac--gttagcctagatctacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggagcagtaacacacatggagctgtcatcgcctgtggtaacagtgccttctacagtacttcccaaagggcctgttagttcacttaattcttttatagatagaaggagtacactctaaaacactggtcaatagtacagtatagtaaatacttaaa i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 369527 2904 - 608964 I e dasNov3.JH569502 3844102 11544 + 6579706 I e cebCap1.NW_016107444v1 355555 4012 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855927 3886 - 74750902 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=394558.000000 s hg38.chr3_KI270779v1_alt 70447 499 + 205312 ccaggaacacatttattatcattatcacgtattgtgtattgtacagaatggtgtgtgctgtgctatccaggaacacatttattatcattatcaagtattgtgtactgtacagaatggtgtgcgctgtgcttttatgcaagtggcagcacagtagctttacacgagcatcactagacacatgagtagcattgcactcggcaacaggaattttttcaggcccattattataatcttatgggaccgcatcctatatgcagtttgtcattgaccaaaatgtccttatgcgatgcatgactATATTT--------------GCAAAGGActagtatctagaatacatttaaaagtcttaaaatagtaacaaaacaaagaatgcaattagaacatgagcaaaagatacaaagcaacatttcactggagaagatatacagattgcaaataagcacatgaaaagatgtttgataccattagggaaacgcttctttaaaccaggagatatcaccacgtgtta s panTro5.chr3 200055793 498 + 202621043 ccaggaacacatttattatcattatcaagtattgtgtgctgtacagaatggtgtgcgctgtgctATccagtaacacatttattatcattatcaagtattgtgtactgtacagaatggtgtgcgctgtgcttttatgcaagtggcagcacagtagctttacacgagcatcactagacatatgagtagcattgcactcggcaacaggaattttt-caggcccattattataatcttatgggaccccatcctatatgcagtttgtcattgaccaaaatgtccttatgcaatgcatgactATATTT--------------GCAAAGGActagtatctagaatacatttaaaagtcttaaaatagtaacaaaacaaagaatgcaattagaacatgagcaaaagatacaaagcaacatttcactggaaaagatatatagattgcaaataagcacatgaaaagatgtttgataccattagggaaacgcttctttaaaccaggaaatatcaccacgtgtta i panTro5.chr3 I 723 C 0 s panPan2.chrUn_NW_014024201v1 36882 498 + 190779 ccaggaacacatttattatcattatcaagtattgtgtgctgtacagaatggtgtgcgctgtgctATccaataacacatttattatcattatcaagtattgtgtactgtacagaatggtgtgcactgtgcttttatgcaagtggcagcacagtagctttacacgagcatcactagacatatgagtagcattgcactcggcaacaggaattttt-caggcccattattataatcttatgggaccccatcctatatgcagtttgtcattgaccaaaatgtccttatgcaatgcatgactATATTT--------------GCAAAGGActagtatctagaatacatttaaaagtcttaaaatagtaacaaaacaaagaatgcaattagaacatgagcaaaagatacaaagcaacatttcactggaaaagatatatagattgcaaataagcacatgaaaagatgtttgataccattagggaaatgcttctttaaaccaggaaatatcaccacgtgtta i panPan2.chrUn_NW_014024201v1 I 189 C 0 s gorGor5.CYUI01000576v1 67454 497 + 106623 ccaggaacacatttattatcattatcaagtactgtgtactgtacagaatggtgtgcgctgtgctATccaggaacacatttattatcattatcaagtactgtgtactgtacagaatggtgtgc-ctgtgcttttatgcaagtggcagcacagtagctttacacgagcatcgctagccacatgagtagcattgcactgggcaacaggaattctt-caggcccattattataatcttatgggaccccatcctatatgcagtttgtcattgaccaaaatgtccttatgcaatgcatgactATATTT--------------GCAAAGGActagtatctagaatacatttaaaagtcttaaaatagtaacaaaacaaagaatgcaattagaacatgagcaaaagatacaaagcaacatttcactggaaaagatatacagattgcaaataagcacatgaaaagatgtttgataccattagggaaacgcttctttaaaccaggagatatcaccacgtgtta i gorGor5.CYUI01000576v1 I 63 C 0 s nomLeu3.chr11 120808622 436 + 123690457 ------------------------------------------------------------------ccagtaac---------attattatcaagtattatgtgctgtacagaatggtgtgtgctgtgcttttatgcaagtggcagcacagtagctttacatgagcatcactagacacatgagtagcattgcactcggcaacaggaattttt-caggccccttactataatcttatgggaccccatcctatatacagtgtgtcattgacccaaatgtccttatgcaacgcatgactatttgcaaaccacacatccagcaaaggactagtatctagaatacatttaaaagtctt-aaacagtaacaaaacaaagaatccaattagaacatgagcaaaagatacaaagcaacatttcactggaaaagttacacagattgcaaataagcacatgaaaagatgtttgataccattagggaaatgcccctttaaaccaggagatcccaccatgtgtta i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 369527 2904 - 608964 I e dasNov3.JH569502 3844102 11544 + 6579706 I e cebCap1.NW_016107444v1 355555 4012 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855927 3886 - 74750902 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=453902.000000 s hg38.chr3_KI270779v1_alt 70946 478 + 205312 gaatcaacaaaataa--------ggccaggcatggtggctcacacctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggaattcaagaccaacctggccaacatggcaaaaccctgtctctgctgaaaacacaaaaattagccaggtgtggtggcacacgcctgtagtcctagcaccttgggaggctgaggcaagataattgcttaaacccaggagacggaggttgcagtaagctgagatcatgccactgcgctccagcctgggcgacagagcaagattatgtctcaaaaaaaaaaaaaaaaaaaagaatcaccaaaataaaaaatagtaacaatactatt----gtcaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtg-cagccactctgggaaacagcttggctgtttttttttatgactgaatgtgcaactactatatgatgcag s panTro5.chr3 200056291 469 + 202621043 gaatcaacaaaataa--------ggccaggcacggtggctcacacctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccaacctggccaacatggcaaaaccctgtctctgctgaaaacacaaaaattagccaggtgtggtggcacacgcctgtagtcctagcaccttgggaggctgaggcaagataattgcttaaacccaggagacggaggttgcagtaagctgagatcatgccactgtgctccagcctgggcgacagagcaagattatgtctcaaaaaaaaaaaa--------gaatcaccacaataaaaaatagtaacaatactatt----gtcaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtg-cagccactctgggaaacagcttggctgtttttttt-atgactgaacgtgcaactactatatgatgcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 37380 471 + 190779 gaatcaacaaaataa--------ggccaggcacggtggctcacacctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccaacctagccaacatggcaaaaccctgtctctgctgaaaacacaaaaattagccaggtgtggtggcacacgcctgtagtcctagcaccttgggaggctgaggcaagataattgcttaaacccaggagacggaggttgcagtaagctgagatcatgccactgcgctccagcctgggcgacagagcaagattatgtctcaaaaaaaaaaaa------aagaatcaccacaataaaaaatagtaacaatactatt----gtcaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtg-cagccactctgggaaacagcttggctgtttttttt-atgactgaacgtgcaactactatatgatgcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 67951 473 + 106623 gaatcaacaaaataa--------ggccaggcacggtggctcacacctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccaacctggccaacatggcaaaaccctgtctctgctgaaaacacaaaaattagccaggtgtggtggcacatgcctgtagtcctagcaccttgggaggctgaggcaagataattgcttaaacccaggagacggaggttgcagtaagctgagatcatgccactgcgctccagcctgggcgacagagcaagattatgtctcaaaaaaaaaaaa------aagaatcaccaaaataaaaaatagtaacaatactatt----gtcaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtgccagccactctgggaaacagcttggcagtttttttttatgactgaacgtgcaactactatatgatgcag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120809058 465 + 123690457 gaatcaacaaaataa--------ggccgggcacggtggctcatgtctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccagcctggccaacatggcaaaaccctatctctgctaaaaacacaaaaattagccaggcgtggtggcacatgcctgtagtcctagcaccttgagaggctgaggcaggagaattgcttaaacccaggagacagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacagagcaagattatttctcaaaaa-------------aggaatcaccaaaataaaaaatagtaacaatactgtt----ggcaaggatgcaaaggaactgtaccattcagtcactgctgtgagaatttacagtggtg-cagccactctgggaaacagtttggcagttttttttaatgactgaagatgcaactactatatgatgcag i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 372431 403 - 608964 gaaatgacaaaattatagcagtgggctgggcaccctggctcacacatgtaatcttagcactctgggagactgaggtgggtggattgcctaagctcagaagttggagaccagtctgagtaaga--gtgagaccttgtctct------------aaaaatagctgggcgttgt----------tgtagtcccag-gttacaggaggctgaggcaagaggatcacttgagcccaagaatgtgaggttgctgtgagct---atc-----------taccaatcttggcaa---agcaagattctgtctcaaaa--------------aaaaattatagaagtggagaacagtttagaggttgtcagaggttaaggagggggtagagtta-----------------ggtgagaagt--aggtAG-A-TATCTACCC----------CTCACCCCTCTCTTGTTCTGTCAGCAT-TTCAACAGCCATGTGGTGTAG i otoGar3.GL873829 I 2904 I 219 e dasNov3.JH569502 3844102 11544 + 6579706 I e cebCap1.NW_016107444v1 355555 4012 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855927 3886 - 74750902 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=146165.000000 s hg38.chr3_KI270779v1_alt 71424 161 + 205312 taatttcatttttgcacatttatcccggagaaatgaaaacatatattcacacaaaacctgtatatgaatgctaataaaagTCAATTggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcagtggatcacctgaggtcagga s panTro5.chr3 200056760 161 + 202621043 taatttcatttttgcacatttatcccggagaaatgaaaacatatattcacacaaaacctgtatatgaatgctaataaaagTCAATTggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcagtggatcacctgaggtcagga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 37851 161 + 190779 taatttcatttttgcacatttatcccggagaaatgaaaacatatattcacacaaaacctgtatgtgaatgctaataAAAGTCAATTggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcagtggatcacctgaggtcagga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 68424 161 + 106623 taatttcatttttgcacatttatcccggagaaatgaaaacatatattcacacaaaacctgtatatgaatgctaataAAAGTCAATTggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcagtggatcacctgaggtcagga i gorGor5.CYUI01000576v1 C 0 T 68585 s nomLeu3.chr11 120809523 161 + 123690457 taatttcatttttgcacgtttatcccaaggaaatgaaaacatatattcccacaaaacctgtatatgaatgctaataaaagttAATTggccaggtgtggtggctcatgcctgtaatcccagcactttgagaggctgaggctgtggatcacttgaggtcagga i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 372834 219 - 608964 I e dasNov3.JH569502 3844102 11544 + 6579706 I e cebCap1.NW_016107444v1 355555 4012 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855927 3886 - 74750902 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=66660.000000 s hg38.chr3_KI270779v1_alt 71585 81 + 205312 gtttgagaccagcctggccaacgtggtgaaaactcgtctctactaaaaatacagcaattagctgggtgtaatagtagccac s panTro5.chr3 200056921 81 + 202621043 gtttgagaccagcctggccaacatggtgaaaactcgtctctactaaaaatacagcaattagctgggtgtaatagtagccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38012 81 + 190779 gtttgagaccagcctggccaacatggtgaaaactcgtctctactaaaaatacagcaattagctgggtgtaatagtagccac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 0 80 + 106623 gtttgagaccagcctggccaacatggtgaaaactcgtctctactaaaag-acagcaattagctggatgtaattgtaggcac i gorGor5.CYUI01000576v1 T 68585 C 0 s nomLeu3.chr11 120809684 81 + 123690457 gtctgggaccagcctggtcaacacggtgaaaacccatctctactaaaaatacagcaattagctgggtgtagtagtaggtgc i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 372834 219 - 608964 I e dasNov3.JH569502 3844102 11544 + 6579706 I e cebCap1.NW_016107444v1 355555 4012 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 855927 3886 - 74750902 I e saiBol1.JH378146 398871 1518 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=284674.000000 s hg38.chr3_KI270779v1_alt 71666 130 + 205312 ctgtaatcccagctactggggagg--ctgaagcagaagaacctcttgaacccgggaggcagaggttgcagtgagc-tgagatcgtaccactgcactccagc-ctgggcgatagagtgagactctgtctcaaaaa s panTro5.chr3 200057002 130 + 202621043 ctgtaatcccagccactggggagg--ctgaagcagaagaacctcttgaacccaggaggcagaggttgcagtgagc-tgagatcataccactgcactccagc-ctgggcgatagagtgagactctgtctcaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38093 127 + 190779 ctgtaatcccagctactggggagg--ctgaagcagaagaacctcttgaacccaggaggcagaggttgcagtgagc-tgagatcataccactgcactccagc-ctgggcgatagagtgagactctgtctcaa--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 80 133 + 106623 ctgtaatcccagctactgggggaggcttgaagcagaagaacctcttgaacccgggaggcaga-gttgcagtgagcttgagatcgtaccactgcactccagcgcctggcgatagagtgagactctgtctcaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120809765 130 + 123690457 ctgtaatcccagctactggtgagg--ctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagc-tgagatcataccactgcactccagc-ctgggcgatagagtgagactctgtctcaaaaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859813 130 - 74750902 ctgtaatcccagctactggggagg--ctgaggcaggacaatcccttgaacccagaaggcagaggttgcagtgagc-tgagatcataccactgcattccagc-ctgggtgacagagcaagactctgtctcaaaaa i calJac3.chr17 I 3886 C 0 s saiBol1.JH378146 400389 130 + 17725628 ctgtaatcccagctactgggaagc--ctgaggcatgacaatcccttgagcccagaaggcagaggttgcagtgagc-tgagatcataccactgcattccagc-ctgggtgacagagcaagactctgtctcaaaaa i saiBol1.JH378146 I 1518 C 0 s cebCap1.NW_016107444v1 359567 130 - 6778120 ctgtaatcccagctactggggagc--ctgaggcaggatgatccctcgaacccagaaggcagaggttgcagtgagc-tgagatcgtaccactgctttccagc-ctggttgacagcgcaagactctgtctcaaaaa i cebCap1.NW_016107444v1 I 4012 C 0 e otoGar3.GL873829 372834 219 - 608964 I e dasNov3.JH569502 3844102 11544 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=10448.000000 s hg38.chr3_KI270779v1_alt 71796 5 + 205312 ataaa s panTro5.chr3 200057132 5 + 202621043 ataaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38220 3 + 190779 --aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 213 5 + 106623 ataaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120809895 5 + 123690457 ataaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859943 3 - 74750902 --aaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400519 3 + 17725628 --aaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359697 3 - 6778120 --aaa i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373053 5 - 608964 ataaa i otoGar3.GL873829 I 219 C 0 e dasNov3.JH569502 3844102 11544 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=-483.000000 s hg38.chr3_KI270779v1_alt 71801 15 + 205312 ataaa--ataaataaaa- s panTro5.chr3 200057137 15 + 202621043 ataaa--ataaataaaa- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38223 15 + 190779 ataaa--ataaataaaa- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 218 15 + 106623 ataaa--ataaataaaa- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120809900 17 + 123690457 ataaaatataaataaaa- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859946 5 - 74750902 aaaaa------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400522 16 + 17725628 aaaaaa-aaaaaaaaaa- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359700 8 - 6778120 aaaaa---------aaa- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373058 11 - 608964 atggg------aagatc- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3855646 16 + 6579706 ataaa--atggaacattc i dasNov3.JH569502 I 11544 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=116720.000000 s hg38.chr3_KI270779v1_alt 71816 39 + 205312 aGATTAGATAATCTGCAAAGTTCCTGTGAGCGCTGTCAT s panTro5.chr3 200057152 39 + 202621043 aGATTAGATAATCTGCAAAGTTCCTGTGAGCGCTGTCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38238 39 + 190779 agattagataatctgcaaagttcctgtgagcgctgtcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 233 38 + 106623 aGATTAGATAATCTGCAAAGTTCCTGTGAGCTCTGTCA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120809917 39 + 123690457 agattagataatctgcaaagttcctgcaagctctgtcat i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859951 33 - 74750902 -----aGATAATCTCCAAAGTTCCT-TGAGCTACGTGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400538 39 + 17725628 aaaTTAGATAATCTCCAAAGTTCCTGTGAGCTCCGTGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359708 39 - 6778120 aaaTTAGATAATCTCCAAAGTTCCTGTGAGCTCTGTGGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373069 39 - 608964 agactagataatgtccaaggtccctgtcagttctgttgc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29029975 39 + 31377067 agattggatgatcaccaaaatccctgacagcagtatcat i canFam3.chr33 N 0 I 7 s dasNov3.JH569502 3855662 39 + 6579706 agactagatgtgctccaaggttcctgccacctctgttat i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=149837.000000 s hg38.chr3_KI270779v1_alt 71855 51 + 205312 TTTGTCACTCTGGTTTTTCAGATTCT----T-CCCCTGGAGGCTGGAGTTTCCAGG- s panTro5.chr3 200057191 51 + 202621043 TTTGTCACTCTGGTTTTTCAGATTCT----T-CCCCTGGAGGCTGGAGTTTCCAGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38277 51 + 190779 tttgtcactctGGTTTTTCAGATTCT----T-CCCCTGGAGGCTGGAGTTTCCAGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 271 52 + 106623 TTTGTCACTCTGGTTTTTCAGATTCT----TCCCCCTGGAGACTGGAGTTTCCAGG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120809956 51 + 123690457 tttgtcactctGGTTTTTCAGATTCT----T-CCCCTGGAGACTGGAGTTTCCAGG- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859984 51 - 74750902 TCTGTCACTCTGATTTTTCAGATTCT----T-CCCCGGGAGACTGGAGTTTCCAGG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400577 51 + 17725628 TCTCTCACGCTGATTTTTCAGATTCT----T-CGCTGGGAGACTGGAGTTTCCCAG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359747 51 - 6778120 CCTGTCACTCTGATTTTTCAGATTCT----T-CCCTGGGAGACTGGAGTTTCCAAG- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373108 44 - 608964 tctgtt-------tttttctgattcT----T-CCCTTGGATCCCAGAGTCCCCAGG- i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65397077 49 - 98207768 tctgccactttggcatttcagattct----T-CCC--AGAGCGTGGGTATAAAAAG- i mm10.chr16 N 0 C 0 s canFam3.chr33 29030021 49 + 31377067 tctctgattcTAGCTTCTCTGCTCCT----C-CCACAGG--TCTGGAAGCCCCAGG- i canFam3.chr33 I 7 I 2 s dasNov3.JH569502 3855701 48 + 6579706 --------tctggttttcctgattcTGTCCT-TCCCACACTGCTAGAATTCCCCACG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=258929.000000 s hg38.chr3_KI270779v1_alt 71906 59 + 205312 ATGTCAAA--------------------------ATTACCTCTGCTTGGGTGAGCT---------ATTTCAAGCAGCTGGGATACCT--GTG-TCAC s panTro5.chr3 200057242 59 + 202621043 ATGTCAAA--------------------------ATTACCTCTGCTTGGGTGAGCT---------ATTTCAAGCAGCTGGGATACCT--GTG-TCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38328 59 + 190779 ATGTCAAA--------------------------ATTACCTCTGCTTGGGTGAGCT---------ATTTCAAGCAGCTGGGATACCT--GTG-TCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 323 60 + 106623 ATGTGAAA--------------------------ATTACCTCTGCTTGGGTGAGCT---------ATTTCAAGCAGCTGGGATACCT--GTGTTCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810007 59 + 123690457 ATGTGAAA--------------------------ATAACCTCTGCTTGGGTGAGCT---------ATTCCAAGCAGCTGGGATACCT--GTG-TCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860035 59 - 74750902 ACGTGAAA--------------------------ATTATCCCTGCTTAAGTGAGCT---------ATTCCAAGCAGCTGGGATACCT--GCG-TCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400628 59 + 17725628 ACGTGAAA--------------------------ATCATCCCTGCTTAACTGAGCT---------ATTCCAAGCAGCTGGGACACCT--GCA-TCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359798 57 - 6778120 ACGTGAAA--------------------------ATTATCCCTGCTTAAGTGAGCT---------ATTCCAAGTAGCTGGGACACCT--GCG-TC-- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25862349 54 - 114275543 ATGTGAAA--------------------------ATTACCTCTGCTTGGGTGATCT--------------AAGCAGCTGGGACACCT--GTG-CCAC i micMur3.chr1 N 0 I 24 s otoGar3.GL873829 373154 58 - 608964 ATGAGAAA--------------------------ATTACCTCT-CTTGGATGATCT---------ACTCCAGGCAACTGGGACACCT--GTG-CCAC i otoGar3.GL873829 I 2 I 2 s mm10.chr16 65397126 59 - 98207768 ATATAAAA--------------------------ATTACCTCTGTTTGGCTAAGTC---------AATCCCAGCAGCTGAAACACCT--GTG-CCAC i mm10.chr16 C 0 I 4 s canFam3.chr33 29030072 85 + 31377067 ATGGGGaaaatatatatatatatttttttCCTCTATTACCTCTGCTTGGACAGGCT---------ATTCCAAGCAGCCGGGACACCT--GTG-CCAC i canFam3.chr33 I 2 I 16 s dasNov3.JH569502 3855749 65 + 6579706 CCCCTAAA--------------------------CTTACCTTTGCTTGGGTGAGCCAAGCAGCTGATTCCAAGCAGCTG-----CCTTGGTG-CCAC i dasNov3.JH569502 C 0 I 2 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=44892.000000 s hg38.chr3_KI270779v1_alt 71965 23 + 205312 TCCTGCT-GTC-------TGCCAGTGACTGC s panTro5.chr3 200057301 23 + 202621043 TCCTGCT-GTC-------TGCCAGTGACTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38387 23 + 190779 TCCTGCT-GTC-------TGCCAGTGACTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 383 24 + 106623 TCCTGCTGGTC-------TGCCAGTGCATGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810066 23 + 123690457 TCCTGCT-GTC-------TGCCAGTGACTGC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860094 19 - 74750902 TCCTGCT-GT-----------CAGCGACTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400687 19 + 17725628 CCCTGCT-GT-----------CAGTGACTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359855 18 - 6778120 -CCTCCT-GT-----------CAGTGACTGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373214 23 - 608964 CCATGCC-CTC-------TGCCAGTGACTAC i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65397189 26 - 98207768 CCACGGT-GCCACCCCCTTGCCAATCA---- i mm10.chr16 I 4 C 0 s canFam3.chr33 29030173 23 + 31377067 CCCTGCC-TTC-------TGCCAGTGGCTGC i canFam3.chr33 I 16 C 0 s dasNov3.JH569502 3855816 23 + 6579706 CCTTGCC-CTC-------TACCAATGCCTGC i dasNov3.JH569502 I 2 C 0 e micMur3.chr1 25862403 24 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=151429.000000 s hg38.chr3_KI270779v1_alt 71988 26 + 205312 CCAGGTGTCTG--CTGGTTCCTCCCCAG s panTro5.chr3 200057324 26 + 202621043 CCAGGTGTCTG--CTGGTTCCTCCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38410 26 + 190779 CCAGGTGTCTG--CTGGTTCCTCCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 407 26 + 106623 CCCAGTGTCCG--CTGGTTCCTCCCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810089 26 + 123690457 CCAGGTGTCCG--CTGGTTCCTCCCCAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860113 25 - 74750902 CCAGGTGTTAG--CTGGTTCCT-CCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400706 26 + 17725628 CCAGGTGTTAG--CTGGTTCCTCCCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359873 25 - 6778120 CCAGGTGTTAG--CTGGTTCCC-ACCAG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25862427 26 - 114275543 CCAGGTGTCAG--CTGGTTCCTCCCCAG i micMur3.chr1 I 24 I 24 s proCoq1.NW_012133858v1 7383302 26 + 22200726 CCAGGTGTCAG--CTGGTTCCTCCCCAG i proCoq1.NW_012133858v1 N 0 C 0 s otoGar3.GL873829 373237 25 - 608964 -CAGGTGTCAG--CTGGTTCTTCCCCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65397215 24 - 98207768 CCAGGTGTCAC--CTGGCTCCTCCTC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29030196 28 + 31377067 CCAGGTGTTGAGCTTCGCACCTCCCCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3855839 26 + 6579706 TCAGGAGTCAG--CTGGCTCCTCCCCAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=3740.000000 s hg38.chr3_KI270779v1_alt 72014 4 + 205312 GAGT s panTro5.chr3 200057350 4 + 202621043 GAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38436 4 + 190779 GAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 433 4 + 106623 GAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810115 4 + 123690457 GAGC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860138 2 - 74750902 --CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400732 2 + 17725628 --CT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359898 2 - 6778120 --CT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7383328 4 + 22200726 AAGT i proCoq1.NW_012133858v1 C 0 I 64 s otoGar3.GL873829 373262 4 - 608964 GAGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65397239 3 - 98207768 -TGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29030224 4 + 31377067 GGAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3855865 4 + 6579706 CGGT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25862453 24 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=63237.000000 s hg38.chr3_KI270779v1_alt 72018 22 + 205312 AGGGAGGAACCAGGTGGGCTGG s panTro5.chr3 200057354 22 + 202621043 AGGGAGGAACCAGGTGGGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38440 22 + 190779 AGGGAGGAACCAGGTGGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 437 22 + 106623 AGGGAGGAACCAGGTGGGCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810119 22 + 123690457 AGGGAGGAACCAGGTGGGCTGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860140 22 - 74750902 GGGGAGGAACCAGATGGGTTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400734 22 + 17725628 GGGGAGGAACCAGGTGGGTTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359900 22 - 6778120 GGGGAGGAACCAGGTGGGTTGG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373266 16 - 608964 --GCAAATGCCAAGTGAG---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65397242 22 - 98207768 GTGGAGACACTGGACAAGTGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29030228 20 + 31377067 --GCAGATACCAAACGAGCTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3855869 20 + 6579706 --ACGAATGCCAGGTGAGCTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7383332 64 + 22200726 I e micMur3.chr1 25862453 24 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=159366.000000 s hg38.chr3_KI270779v1_alt 72040 44 + 205312 CTGGGATGGGTGGATATTT-AAAGACCAGGCCTTGGACGCTGCAG s panTro5.chr3 200057376 44 + 202621043 CTGGGATGGGTGGATATTT-AAAGACCAGGCCTTGGACGCCGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38462 44 + 190779 CTGGGATGGGTGGATATTT-AAAGACCAGGCCTTGGACACCGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 459 44 + 106623 CTGGGATGGGTGGATATTTAAAAGACCAGGCCTTGGA-GCCGCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810141 44 + 123690457 CTGGGATAGGTGGATATTT-AAAGACCAGGCCTTGAACACTGCAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860162 43 - 74750902 CTGGGATGGGCAGATATTT-AAAGACTGGGCCTTGGACCC-AAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400756 44 + 17725628 CTGGGATGGGCGGATATTT-AAAGACTGGGCCTTGGACCCTGCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359922 44 - 6778120 CTGGGATGGGCGGATATTT-AAAGACTGGGTCTTGGGCCCTGCAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25862477 44 - 114275543 CTGAGATGGGTGGATATTA-AAAACTCAGGCCCTGGTCCCTGAAA i micMur3.chr1 I 24 C 0 s otoGar3.GL873829 373282 37 - 608964 ------TATGCAGATATT--AAAACCCAGACCTTGGCTCCTGAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65397264 42 - 98207768 CTCCAGTGAGTAGCTATTG-GAG--CTGGACCTTGATCCCTGAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29030248 43 + 31377067 CTGGGATGGGTGAGTATT--AAAGACTTGGCCTTGGTCCTTGAAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3855889 43 + 6579706 CTGGGTTGGTTGG-TATTA-GAAGCCTGGGCTTTGGTCCCTGAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7383332 64 + 22200726 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=1294014.000000 s hg38.chr3_KI270779v1_alt 72084 290 + 205312 CACTTCTATCTCTGCTTGAT-GCCTGCTGCCACGTGGCTGGTCCTCCTCCTCCTGCTGT-GGCTGAGCCTTGGGGT---------GAAGACAGGTGAGGAG--C-TAGGCTGGCAT-CTGTGCTACAGGTCAAA-GAGACCCC-AATCTCTGCTCTC------TCATTCATTCAATCAATT--------AATCTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCCAGCattcattaattcat-taatcaaataattcatGTATTCA-GACACTTATTAAGTACCGACTATATGGTTGATGTGGCTTCTTTGTGTATCCA s panTro5.chr3 200057420 286 + 202621043 CACTTCTATCTCTGCTTGAT-GCCTGCTGCCACGTGGCTGGTCCTCCTCCTCTTGCTGT-GGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--C-TAGGCTGGCAT-CTGTGCTACAGGTCAAA-GAGACCCC-AGTCTCTGCTCTC------TCATTCATTCAATCAAT------------CTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCCAGCattcattaattcat-taatcaaataattCGTGTATTCA-GACACTTATTAAGTACCGACTATATGGTTGATGTGGCTTCTTTGTGTATCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38506 286 + 190779 CACTTCTATCTCTGCTTGAT-GCCTGCTGCCACATGGCTGGTCCTCCTCCTCTTGCTGT-GGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--C-TAGGCTGGCAT-CTGTGCTACAGGTCAAA-GAGACCCC-AGTCTCTGCTCTC------TCATTCATTCAATCAAT------------CTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCCAGCattcattaattcat-taatcaaataattCGTGTATTCA-GACACTTATTAAGTACCGACTATATGGTTGATGTGGCTTCTTTGTGTATCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 503 288 + 106623 CACTTCTGTCTCTGCTTGATGGCCTGCTGCCATGTGGCTGGTCCTCCTCCTCCTGCTGTGGGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--CATAGGCTGATCTGCTGT-CTACAGGTCAAA-GAGACCCC-AGTCTCTGCTCTC------TCATTCATTCAATCAATT--------AATCTGTTTTGTCTCTGGCATGA----CCACCTCC-GTGACCTAGCATTCATTAATTCAT-T-ATCAAATAATTTGTGTATTCAGGACACTTATTAAGTA-CGACTATATGCTTGATGTG--CTTTTTGTGTATCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810185 283 + 123690457 CACTTCTATCTCTGCTTGAT-GCCTGCTGCCATGTGGCTG---TTCCTCCTCCTGCTGT-GGCTGAGCCCCGGGGT---------GAAGACAGGTGAGGAG--C-TAGGCTGGCAT-CTGTGCTACAGGTCAAA-GAGACCCC-AATCTCTGCTCTC------TCATTCATTCAATCAAT------------CTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCTAGCattcattaattcat-taatcaaataatttatGTATTCA-GACACTTATTAAGTACCAACTATATGCCTGATGTGGCTTCTTTGTGTATCCA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860205 263 - 74750902 CACTGCTCTCTCCGCTCG-T-GCCTGCTGCCATGTGGCTGCTGCTTCTCCTCCTGCTGT-GGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--C-TAGGCTG--AT-CTGTGCTAGAGGTCAAG-GAGACCTC-CACCTCTGGTCTC------TCAGTCATTCAATCAATT--------AATCTCTTTTGTCTGTGACACGAC---CCACCTCCTGTGGTCTAGCATTCATTA-------------------------ATTCA-GACCCTTATTAAGTACTGACTATATGCTTGATGTGGCTTCTCTGTGTATCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 400800 287 + 17725628 CACTGCTGTCTCTGCTCC-T-GCCTGCTGCCATGTGGCTGGGGCTCCTCCTCCTGCTGT-GGCTGAGCCCTGGGGT---------GAAGACAGGTAAGGAG--C-TAGGCTG--AT-CTGTGCTAGAGGTCAAG-GAGACCCC-CACCTCTGGTCTC------TCAGTCATTCAACCAATT--------AATCTCTTTTGTCTCTGACGAGAC---CTACCTCCTGTGGTCTAGCATTCATTAATTCAT-TAATTAAATAATTCATGTATTCA-GACCCTTATGAGGTACCGACTGTATGCTCGATGTGGCTTCTTTGTGTATCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 359966 283 - 6778120 CACTGCTGTCTCCGCTCC-T-GCCTGCTGTCATGTGGCTGGGGCTTCTCCTCCTGCTGT-GGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--C-TAGGCTG--AT-CTGTGCTAGAGGTCAAG-GAGACCCC-CACCTCTGGTCTC------TCAGTCATTCAATC------------AATCCCTTCTGTCTCTGACGAGAC---CCACCTCCTGTGGTCTAGcattcattaattcat-taatcaaataattcatgtattca-GACCCTTATTAAGTACCGACTGTATGCTTGATGTGGCTTCTTTGTGTATCCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25862521 306 - 114275543 TACTTCCGTCTCTGCTTGAT-GCCTGTAGCTATGTGGCTGGTCCTCCTTCTTCTGCTGT-GGCTGAGCCCTACGGCCCCAAACCAGAGGACAGGTGAGGAG--C-TAGGCTAGCAT-CTGTGCTAGAGATCAAA-ATGACCCT-GATCTCTGGTCtctttcattcattcattcattcaatgagtca---atctttTTTTGTCTTTGACATGAT---CTACCTCCTGTAACCTAGCATTAATTA----AT-TAATCAAATAattcatttattca-gacatttactaagttcctactatatgcTTAATGTGGCTTCTCTGTGTGTCCA i micMur3.chr1 C 0 I 2814 s proCoq1.NW_012133858v1 7383396 299 + 22200726 CACTTCTGTCTCTGCTTGGT-GCCTCTAGCCATGTGGCTGGTCCTCCTTCTCCTGCTGT-GGCTGAGCCCGATGGCCCCAAACCAGAGGACAGGTGAGGAG--C-TAGGCTAGCAT-CTGTGCTAGAGATCAAA-ATCACCCT-GATCTCTGGTCtcttttattcattcattcattcaa----tca---ATTTTTTT---TCTTTGACATGAT---CTACCTCTTGTGGCCTAGCattaatta----at-taatcaaataattcatttattCA-GACATTTACTAAGTTCCTACTGTATATGTAATGTGGCTTCTCTGTGTGTCCA i proCoq1.NW_012133858v1 I 64 C 0 s otoGar3.GL873829 373319 300 - 608964 CACTTCTACCTCTGCATGGT-GCC-------ATGTGGCGGGTGCTCCTTTTCCTGCTGT-GGCTGACCCCTGCGGCCCCAAACCAAAAGACAGGTGAGGAG--C-CAGGCTAGCAG-CTATGCTAGATGACAAA-GGGACCCTCTATCTCTGGTCTCTttcattcattcattcattcaatcaatcactcactcTCTTTTGTCCTTGGCATGAT---CTACCTTCTGTGGCCTGGTATTAATTA----AT-CA---AAATAattcatttattca-gacatttgctaagtacctacggtatgcTTAAGGTGGCTTCTTGGTGTAGGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65397306 299 - 98207768 CACTTCTGCATCTATTGA---GCCTGAAGCCATGTGGTTTGCCTTTCTCCTCCTGCTGT-GGCTGGGCCCTGTGATTCCAAACCAGAAGGCAGGTGAGGAGAAC-TGAGCTGACCC-CTATTTGAGAGGTCAAA-GAGACCCT--GTGTTTGTTCTCATT---TCATTTAGTCAATCAAT------------ATTATTTATTTCTGGTCAGATACGCCACCTTCTGATGGCTAGAACCCACTCACTGATCTGATCAGGTAACCCACTTACTCA-GACATCACTTGTATCCTAA--ATGTGCTTGGTGTGGCTTCTGGGTGTGTCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29030291 268 + 31377067 CACT-CTGTCTCTGCTCAGT-GCCTGCAACCATGTGTCTGG---TTCTCCTCCTGCTGT-GGTTGAGCCCCGTGGCCCCAAACCAGGAGACAGGTGAGGAG--C-------------CTGTCTAGCAGGTCAAA-GAGACCTC-TAGTCCCTttcat------tcatttattcattcagt------------cattTGTGTTCCTGGCATGAT---TTGCCTCCTAGGGGCTAATGTTCACTAATTCAT-TAATCCAATAATTCATTTCCTCG-GAACCTTCCTGTGC------------TTTAATGTGGCTTCTCTGTGAATCCA i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3855932 282 + 6579706 CACTTCTGTCTCTGCTTG-T-GTCTGCAGCCATGTGGCTGG---TTCTCCTCCTGCTGT-GGCTGAGCCCTGCCGCCCTGATTCGTAGGACAGGTGAGGAG--C-CACGCTAGCCC-CTGCACTAGAGGTCAAAGGGGAGCCC-GGCCTCTAGTTTCTT----CCACTCATT--------------------CTTTTCTGTCCCTGGTAGGAT-------CTCCTCAGGGCTTGTATTCATTAATTTGT-TAATTGAATAATTCATTTACTCA-GGTATTTACTAAGTCCCTACTATATGCTTAACGTGGCTTCTCTGTGTGTCCA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=152277.000000 s hg38.chr3_KI270779v1_alt 72374 49 + 205312 GTTTTATATCTGGATAAGATGTCTTTGGATGA---------TCAGCTTGGGAGGGTCT---- s panTro5.chr3 200057706 49 + 202621043 GTTTTATATCTGGATAAGATGTCTTTGGATGA---------TTAGCTTGGGAGGGTCT---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38792 49 + 190779 GTTTTATATCTGGATAAGATGTCTTTGGATGA---------TTAGCTTGGGAGGGTCT---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 791 47 + 106623 GTTTTATATCTGGATAAGATGTCTTTGGATGA---------TTAGTT--GGGAGGTCT---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810468 49 + 123690457 GTTTTATATATGGATAAGATGTCTTTGGGTGA---------TTAGCTTGGGAGGGTCT---- i nomLeu3.chr11 C 0 I 21 s calJac3.chr17 860468 47 - 74750902 GCTTCATATCTG--TAAGATGTCTTTGGGTCA---------TTAGCTTGGAAGGGCCT---- i calJac3.chr17 C 0 I 21 s saiBol1.JH378146 401087 47 + 17725628 GCTTCATATCTG--TGAGATGTCTTTGGCTCA---------TCAGCTTGGAAGGGCCT---- i saiBol1.JH378146 C 0 I 21 s cebCap1.NW_016107444v1 360249 47 - 6778120 GCTTCATATCTG--TAAGATGTCTTTGGGTCA---------TTAGCTTGGAAGGGCCT---- i cebCap1.NW_016107444v1 C 0 I 16 s proCoq1.NW_012133858v1 7383695 45 + 22200726 CCTTTGGATCTA--TAAGATGTCTTGG--TGA---------TTAGCTTGGGAGGGTCT---- i proCoq1.NW_012133858v1 C 0 I 2749 s otoGar3.GL873829 373619 45 - 608964 CCTTTGGCTATA--TAAGATGTCTTTG--TGA---------TGAGCTTGGGGGGGTCT---- i otoGar3.GL873829 C 0 I 21 s mm10.chr16 65397605 45 - 98207768 -------------CACAGCTGTCTCTGCAGCAAGCTTGGAGCCTGCTTGGGAAGGCTG---- i mm10.chr16 C 0 I 3 s canFam3.chr33 29030563 47 + 31377067 CCTTCATATTCC--TAAGATGTCCTTGGCTGA---------TTAGCTTGGGAAGGTTG---- i canFam3.chr33 I 4 I 12 s dasNov3.JH569502 3856214 51 + 6579706 CCTTCACATTTA--CAAGATGTTCTTGAATGA---------TCATCTGGGGAGGATGGTGCT i dasNov3.JH569502 C 0 I 18 e micMur3.chr1 25862827 2814 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=553498.000000 s hg38.chr3_KI270779v1_alt 72423 177 + 205312 AGTATCCAGAG-GATGCTCCCTCGGATAGA-GGCAGC-------------GTGG------GCACTGTGGGTGGCTGGGGTGGACGGGACAGGAGGGAAGGTAGGTGTGATAAACCCAGATCCAGATTAACAGGCAGACTCACTGGGCAATTTCCAGGCACCAGTCTACTGGGTTTATT-CAAACATCCCTGGAAATACA s panTro5.chr3 200057755 177 + 202621043 AGTATCCAGAG-GATGCTCCCTCGGATAGA-GGCAGC-------------GTGG------GCACTGTGGGTAGCTGGGGTGGACGGGACAGGAGGGAAGGTAGGTGTGATAAACCCAGATCCAGATTAACAGGCATACTCACTGGGCAATTTCCAGGCACCAGTCTACTGGGTTTATT-CAAACATCCCTGGAAATACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 38841 177 + 190779 AGTATCCAGAG-GATGCTCCCTCGGATAGA-GGCAGC-------------GTGG------GCACTGTGGGTAGCTGGGGTGGACGGGACAGGAGGGAAGGTAGGTGTGATAAACCcagatccagattaacaggcatactcactgggcaatttccaggcaccagtctactgggtttatt-caaacatccctggaaataca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 838 173 + 106623 AGTATCCAGA--GATGCTCCCTCGGATAGA-GGCAGC-------------GTGG------GCACTGT-GGTGGCTGGGGTGGACGGGGCAGGAGGGAAGGTAGGTGTGATAAACCcagatccagattaacaggcagactcact-ggcaatttccaggcaccagtctactgggttta-t-caaacatccctggaaataca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810538 176 + 123690457 AGTATCCAGAG-GAAGCTCCCTCGGATAGA-GGCAGT-------------GTGG------GCACTGCGGGTGGCTGGGATGGATGGGACAGGA-GGAAGGTAGGCATGATAAACCCAGATCCAGATTAATAGGCAGACTCATTGGGCAATTTCCAGGCACCAGTCTATTGGGTTTATT-AAAACATCCCTGGAAATACA i nomLeu3.chr11 I 21 C 0 s calJac3.chr17 860536 178 - 74750902 AGCATCCAGAG-GAAGCTCCCTCAGATGGAGGGCAAC-------------ATGG------GCACCGTGGGCAGCTGGGGTGGGCGGGACAGGAGGTAAGGTAGGTGTGAAGAACCCAGATCCAGATTAGTAGGCAGATTCACTGGGCAGTAGCCAGGCACCAGTCCACCGGGTTTATT-AAAACATCCCTGGAAATACA i calJac3.chr17 I 21 C 0 s saiBol1.JH378146 401155 177 + 17725628 AGCATCCAGAG-GAAGCTCCCTCAGATAGAGGGCAAC-------------ATGG------GCACCGTGGGCAGCTGGGGCGGGCGGGACAGGAGG-AAGGCAGGTGCGAAGAACCCAGCTccagattaataggcagattcgctgggcggttgccaggcaccagtgcatggggtttatt-aaaacatccctggaaataca i saiBol1.JH378146 I 21 C 0 s cebCap1.NW_016107444v1 360312 172 - 6778120 ------CAGAG-GAAGCTCCCTCAGATAGATGGCAAC-------------ATGG------GCACCGTGGGCAGCTGGGGTGGGCGGGACAGGAGGGAAGGTAGGTATGAAGAACCcagatccagattaataggcagattcactgggcggttgccaggcaccagtccatcgggtttatt-aaaacatccctggaaataca i cebCap1.NW_016107444v1 I 16 C 0 s otoGar3.GL873829 373685 159 - 608964 AGTGTCCAGAGTGGGGCTC-------TAGA--------------------ATGT------GTACTGTGGGGGGCAAGGG-----GGAACAGGTGGGAAGGGGAGT-TGATGAGGAcagatccagattaacaggcaaaatcactaggcaactgccaggctccaatccatcaggtttact-aaaacatccctgaaaatgca i otoGar3.GL873829 I 21 C 0 s mm10.chr16 65397653 162 - 98207768 AGTCTTCAGAG-GTGGTTC-------TGGT--------------------GTGT------ACACTTTTGGAGG--AGGCATGAGGGATTAGGAGGGATGGTGAGCGTAAAAAGCCCAGGTCCAGATGAACA-GCAGCCTGGTCCATCAGCCGCCACCCACTAGTTGATCAGGATGGCTAAAAATATACCTGGAAGTACA i mm10.chr16 I 3 C 0 s canFam3.chr33 29030622 164 + 31377067 AGTGTCCCAAA-GAGATTCCTGCCAGTAGA-GGCAGCAGGGAGTTCTAGAATGT------GCACTGAGGCGGG-----------GAGGCAGGAGGGAAGGT-GCTGTGACAAGTCTAGACCCAGA------------CTCAAGGGGTGACTGCCAGGCAC-AACCCATTTGTTTTgct-ataatat-ccgggaaatgtg i canFam3.chr33 I 12 C 0 s dasNov3.JH569502 3856283 176 + 6579706 AATGTCCAGAG-GAGGTTCCTGTGTGTAGG-GGCAGC-------------ATGGGGCACTGGACTGTGAGCTGTGGG-------GGGAGAGGAGAAGAGGTGAGTGTGACGAGCCcagatccagatgaataggcagactcaccgggcagctgccaggcaccagtccattcggcttgct-gaaacatccctggagatgca i dasNov3.JH569502 I 18 I 2056 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=12576.000000 s hg38.chr3_KI270779v1_alt 72600 5 + 205312 ACAGG s panTro5.chr3 200057932 5 + 202621043 ACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 39018 5 + 190779 acagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 1011 4 + 106623 aca-g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810714 5 + 123690457 ACAGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860714 5 - 74750902 ACGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 401332 5 + 17725628 acagg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 360484 5 - 6778120 acagg i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373844 5 - 608964 gtgag i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65397815 5 - 98207768 GCAGG i mm10.chr16 C 0 I 1273 s canFam3.chr33 29030786 5 + 31377067 atggg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e dasNov3.JH569502 3856459 2056 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=76552.000000 s hg38.chr3_KI270779v1_alt 72605 32 + 205312 GTGAATACAGTTGCATTTAC----TAGAACTtctct s panTro5.chr3 200057937 32 + 202621043 GTGAATACAGTTGCATTTAC----TAGAACttctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 39023 32 + 190779 gtgaatacagttgcatttac----tagaacttctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 1015 31 + 106623 gtgaatacagttgcatttac----ta-aacttctct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810719 32 + 123690457 GTGAATACAGTTACATTTAC----TAGAACttctct i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860719 30 - 74750902 G-GAATAACATTGCATTTAC----TAGAACttctc- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 401337 35 + 17725628 gtgaattactttgcatttactagatagaacttctc- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 360489 32 - 6778120 gtgaattacgttgcatttac----tagaacttctct i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 373849 32 - 608964 attaattaagctgcatttac----ttgaacttcttt i otoGar3.GL873829 C 0 I 1316 s canFam3.chr33 29030791 31 + 31377067 -acgataaagttgtatttac----tagaatgtcttt i canFam3.chr33 C 0 I 1572 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=589462.000000 s hg38.chr3_KI270779v1_alt 72637 324 + 205312 ctctctctcctctctctctctttttaatttttttttttccagacagagtct-gctc-tgtcccccgccaggctggagtgcagtggtacgatctcggctcactgcaacctccaccttctgggttcaagccattctcctgcctcagcctcccgag-tagctgggattataggcatgcaccaccatgcctggctaatttttggcattttaaatagagacagggtttcgccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcccacctccgcctcccaaagtgttgggattacaggtgtgagccaccgtgcctggcc s panTro5.chr3 200057969 309 + 202621043 ctctctct-------------tttt--ttttttttttttcagacagagtct-gctc-tgtcccccgccaggctggagtgcagtggtacgatctcggctcactgcaacctccaccttctgggttcaagccattctcctgcctcagcctcccgag-tagctgggattataggcatgcaccaccatgcctggctaatttttggcattttaaatagagacagggtttcgccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcccacctccgcctcccaaagtgttgggattacaggcgtgagccaccatgcctggcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 39055 310 + 190779 cTCTCTCTC------------tttt--ttttttttttttcagacagagtct-gctc-tgtcccccaccaggctggagtgcagtggtacgatctcggctcactgcaacctccaccttctgggttcaagccattctcctgcctcagcctcccgag-tagctgggattataggcatgcaccaccatgcctggctaatttttggcattttaaaaagagacagggtttcgccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcccacctccgcctcccaaagtgttgggattataggcgtgagccaccgtgcctggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 1046 308 + 106623 cTCTCTCttc-----------tctc--ttttttttttttcagacaga-tct-gctc-tgtcccccacca-gctggagtgcagtggtacgatctcggctcactgcaacctccaccttctgggttcaagccattctcctgcctcagcctcccgagttagctgggattataggcatgcaccaccatgcctggctaattttt-gcattttaaatagagacagggtttcaccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcccacctccgcctcccacagtgttgggattacaggtgtgagccactgtgcct-gcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120810751 301 + 123690457 ctctct---------------------ttttttttttttcagacagagtct-gctc-tgtccgctgccaggctggagtgcagtggtatgatctcggctcactgcaacctccaccttctgggttcaagcgattctcctgccttagcctcccgag-tagctgggattataggcgtgcaccaccatgcctggccaatttttggcattttaaatagaggcagggtttcgccatgttagccaggctagtctcgaacttctgacttcaggtgatctgcccgcctccacctcccaaagtgctgggattacaggcctgagtcac--tgcccggcc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860749 286 - 74750902 ---------------------tttt--tttctttcttttgaaacagagtcttgctc-tgtcc---accaggcgcgagtgcagtggcgtgatctcggttcactgcaacctccgccttctgcgttcaagcgattctcctgtctcagcctcccgag-tagctgggattacaggtgcacagcaccatgcctggctaatttttggcattttgaatagagatggggtttcaccgtgttggccacgctggtcttgaactcctcacttcaggtgatctgcccacctctgcctcccaaag-tct-ggattacaggcgtgag-cACC---------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 401372 288 + 17725628 ---------------------tttt--tttctttcttttgaaacagagtcttgctc-tgtcc---agcaggctggagtgcagtggtgtgatctcggttcactgcaacatcggccttctgcgttcaagcgattctcctgtcttagcctcccgag-tagctgggattacaggcatgcagcaccatgcctggctaatttttggcattttgaatagagatggggtttcaccgtgttggccaggctggtcttgaactcctgacttcaagtgatctgcccacctctgcctcccaaagttct-ggattacaggcgtgagccacc---------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 360521 305 - 6778120 ctttttt--------------tttt--ttttttttttttgagacagagtttcgctcttgtta---cccaggctggagtgcaatggcgcgatctcggctcaccgcaacatccgcctcccgggttcaggcaattctcctgcctcagcctcctgag-tagctgggattacaggcacgtgccaccatgcccagctaattttttgtagttttagtacagacggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcggcctcccacagtgctgggattacaggcttgagccaccgcgcccggcc i cebCap1.NW_016107444v1 C 0 I 5169 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e otoGar3.GL873829 373881 1316 - 608964 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=615705.000000 s hg38.chr3_KI270779v1_alt 72961 400 + 205312 CTAGAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTAGGAACAcagtcagctgttgctta---atgatggagacacattctgagaaatgcatcatcagatgatttctttgttgtatgaatatcatagagttcacacaacaatgaaatc-gagagtttacataaacctagatggtttatatatatatttatttacatgtttgttttccacatggaaagccacatgtcccagcacatgtcccattactgaacatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttatggggccaccgtcatatatatggtccatcatcggtctaaacatcgtgatgtggcacaaggctgTACTT s panTro5.chr3 200058278 400 + 202621043 CTAGAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTAGGAACAcagtcagctgttgctta---atgatggagatacattctgagaaatgcatcatcagatgatttctttgttgtatgaatatcatagagttcacacaacaataaaatc-gagagtttacataaacctagatggtatatatatatatttatttacgtgtttgttttccacatggaaagccacatgtcccagcaaatgtcccattactgaacatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttacggggccaccgtcatatatatggtccatcatcggtctaaacatcgtgatgtggcacaaggctgTACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 39365 400 + 190779 CTAGAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTAGGAACAcagtcagctgttgctta---atgatggagatacattctgagaaatgcatcatcagatgatttctttgttgtatgaatatcatagagttcacacaacaataaaatc-gagagtttacataaacctagatggtatatatatatatttatttacatgtttgttttccacatggaaagccacatgtcccagcaaatgtcccattactgaacatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttacggggccaccgtcatatatatggtccatcatcggtctaaacatcgtgatgtggcacaaggctgTACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 1354 399 + 106623 cTAGAACTTCTCTTGGGAGAAAACTAGATGTCGTTGTAGGGAACAcagtcagctgttgctta---atgatggagatacattctgagaaatgcatcagcagatgatttccttgttgtatgaatatcgtagagttcacacaacaatgaaatcggagagtttacataaacctagatggtatatatatata-ttatttatatgtttgttttccacatggaaagccacatgtcccagcaaatgttccattactg-acatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttacagggccaccgtcatatatatggtccatcatcggtctaaacatcgtgatgtggcacaaggctgTACTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120811052 393 + 123690457 CTACAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTGGGAACAcagtcagctgttgctta---atgatggagatacattctgagaaatgcatcatcagacgatttcatttttgtatgaatatcatagagttcac---acaatgaaatc-cagagtttacataaacctagatggtatatatat----ttatttatatgtttgttttccaaatggaaagccacatgtcccagcaaatgtcccattactcaatatcagtcatttcccctgcttgatcctcaaggccaatatcaagtgccatatattgggtttctgcatctgccctattataatcttacagggccaccgtcatatatatggtccatcatcggtctaaacatcatgatgtggcacaaggctgTACTT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 861035 391 - 74750902 --AGAGC-TCTCTTGGGAGATAAGTAGATGTCACTGGAAGGAACATAGTCAGGTAATA-GTAAtgataatggagattcattctaagaaacgcatcatcagacagtttcactgttgtatgaacaccagagagttcacacggcaatgaaa---cagagtttacataaacctagataatatatgtattt--ttatttataagtatgttttccacatgagaagccaagtgtcccagcaaatgtcccgttac----tatcagtcatttcccctgcttgacccacaatgccagtatcaagtggcatctactgggtttctgcatacgccctattatactcttacgggaccgccgtcatatatatggttcctcattggtctaaacatcattatgtggtgcaagaGTATTCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 401660 392 + 17725628 --agagc-tctcttgggagataactagatgttactggaagtaacaTAGTCAAGTAATG-tta---ataatggagattcattctaagaaatgcatcatcagatggtttcattgttgtatgaacgccatagagttcacacagcagtgaaa---cagagtttacataaacctagataatatatatattt--ttatttatatgtatgttttccacatgaaaagccaagtgtcccagaaaatgtctcgttactgagtatcagtcatttcccctacttgacccacaatgccagtatcaagtggcatctattgggtttctgtatatgccctattataatctcacaggaccactgtcatatatgtggtacctcattggtctaaacatcattatgtagtgcaagaGCATACTT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e otoGar3.GL873829 373881 1316 - 608964 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=451563.000000 s hg38.chr3_KI270779v1_alt 73361 263 + 205312 CTTggctgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgagacgggtggatcacttgaggtcaggag-ttcaagaccagcctgggtaacatggtgaaataccatcgctatt-aaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgacccgagattgcgccactgcgctctagcctgggt s panTro5.chr3 200058678 263 + 202621043 CTTggccgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgagacgggtgcatcacttgaggtcaggag-ttcaagaccagcctgggtaacatggtgaaataccatcgctgtt-aaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgacccgagatcgtgccactgcgctctagcctgggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 39765 262 + 190779 CCTggccgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgagacgggtgcatcacttgaggtcaggag-ttcaagaccagcctgggtaacatggtgaaataccatcgctgtt-aaaatac-aaaattagccaggtgtggtggtgggtgcctgta------atcccagctatttgggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgacccgagatcgtgccactgcactctagcctgggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 1753 259 + 106623 CTTggccgggtgcggtggctcacgcctgtgatcccagcactttgagaggcc-agacgggtggatcacttga-gtcaggagtttcaagaccagcct-ggtaacatggtgaaataccatcgctatt-aaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgacccgagatcacgccact-cgct-tagcctgggt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120811445 264 + 123690457 CTTggccgggcgcagtggctcacgcctgtaatctcagcactttgagaagctgagatggatggatcacttgaggtcaggag-ttcaagaccagcctggctaacatggagaaataccatcgctactaaaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccgagatggcgtgactgtgctccagcctgggt i nomLeu3.chr11 C 0 I 2329 s calJac3.chr17 861426 268 - 74750902 CTTggccgggtgtggtggctcacatctataatcccagcactttgagaggctgacttgggcagatcac--gaggtcaggag-ttcaagaccaccctggccaacatggtgaaaccccatctctattaaaaatacaaaaattagccggatgcggtggtgcacacctgtaggccttgtctcagctacttgggaggctgagacaggggaatcacttgaatctgggaggtggaggttgcagtgagccaatatctcaccactgcactccagcctgggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 402052 262 + 17725628 TTTggccgggcgaggtggctcacatctataatcccagcactttgagaggccgaggcaggcagatcat--gaggtcaggag-ttcaagaccagcctggccaacatggcgaaaccccatctctattaaaaatacaaaaattagccagatgtggtggtgcacgcctgta------gtcccagcaacttgggaggctgaggcaggcgaatcacttgaacctgggaggtggaggctgcagtgggccagtatttcaccactgcactccagcctgggt i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 375197 189 - 608964 CTAggccaggggcagtggctcattcctataatcctagcactctgggagac-------------------------------TT-------------------------------CATCTcta-----------aaaaatagctgggcattgtggcaggcacctgta------gtcccagctacttgggaggcttaggcaagagaatcacttgagcccaagagtttgaggttcctgtgagctatgat---actacagcactctacagagggt i otoGar3.GL873829 I 1316 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=44170.000000 s hg38.chr3_KI270779v1_alt 73624 20 + 205312 gacagagggagactccatct s panTro5.chr3 200058941 20 + 202621043 aacagagggagactccatct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40027 20 + 190779 gacagagggagactccatct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2012 20 + 106623 gacagagggagactccatct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814038 20 + 123690457 gacagagggagactccatct i nomLeu3.chr11 I 2329 C 0 s calJac3.chr17 861694 20 - 74750902 ggcagagggagattctgtct i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 402314 20 + 17725628 gacagagggagattctgtct i saiBol1.JH378146 C 0 I 4318 s otoGar3.GL873829 375386 20 - 608964 gacaaagtgagactctgtct i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=11068.000000 s hg38.chr3_KI270779v1_alt 73644 11 + 205312 caggaaaaaaa s panTro5.chr3 200058961 11 + 202621043 caggaaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40047 11 + 190779 caggaaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2032 11 + 106623 caggaaaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814058 11 + 123690457 caaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 861718 11 - 74750902 CGGGGAAAGAA i calJac3.chr17 I 4 I 2843 s otoGar3.GL873829 375406 8 - 608964 caaaaaca--- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=10316.000000 s hg38.chr3_KI270779v1_alt 73655 24 + 205312 aaaaaaaaaaa---CCCAAagctattt s panTro5.chr3 200058972 25 + 202621043 aaaaaaaaaaa--aCCCAAagctattt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40058 16 + 190779 aaa-----------CCCAAagctattt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2043 27 + 106623 aaaaaaaaaaaaaaccaaaaGctattt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814069 22 + 123690457 aaaaaagaaaa---CC--Aaactattt i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 375414 24 - 608964 agaaaaaGAGA---TGTAACTCTCTTC i otoGar3.GL873829 C 0 I 514 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 861729 2843 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=107381.000000 s hg38.chr3_KI270779v1_alt 73679 123 + 205312 attgtggaaaaattcaaacacatgcaaaagtaaagagaataggatgatgaacccaaggtaccagttggccaccttcaatattatcaacattatgcTCAAGCTCTTATCCCCCATAtttaaaaa s panTro5.chr3 200058997 123 + 202621043 attgtggaaaaattcaaacacatgcaaaagtaaagagaataggatgatgaacccaaggtaccggttggccaccttcaatattatcaacattatgctcaagctcttatcccccatatttaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40074 123 + 190779 attgtggaaaaattcaaacacatgcaaaagtaaagagaataggatgatgaacccaaggtaccggttggccaccttcaatattatcaacattatgcTCAAGCTCTTATCCCCCATATTTAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2070 122 + 106623 actgtggaaaaattcaaacacatgcaaaagtaaagagaataggatgatgaacccaa-gtaccagttggccaccttcaatattatcaacattatgctcaagctcttatCCCCCATATTTAAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814091 123 + 123690457 attatggaaaaattcaaacacacgcaaaagtagagagaataggatgatgaacccaaggtaccagctggccagcttcaaaattatcaacattttgcTCAAGCTCTTATCCCCCATATTTGAAAa i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e otoGar3.GL873829 375438 514 - 608964 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 861729 2843 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=544459.000000 s hg38.chr3_KI270779v1_alt 73802 449 + 205312 atataaccacaataccttatcagagccaaaacaaatatggtcgcacacctgtaatcccaacactttgagagactgaggcgggcagatcgcctgaggccagaagttcaagaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattagctaggcatggtggcgggtacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggaggtggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacagagcaagactctgtctttaaaaaaaaaattaattaattaattaatttaaaaaactacttactatcgtttaatacctatcagtgttcatatttcccccacttgtcaaaaatatcttgtt-atTCAGCAGCAAAGCAGAAGAGAAAAAGAAAAAATAAGA s panTro5.chr3 200059120 449 + 202621043 atataaccacaataccttatcagagccaaaacaaatatggccgcacacctgtaatcccaacactttgagagactgaggcgggcagatcacctgaggccagaaattcaacaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattagctaggcatggtggcgggtacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggaggtggaggttgcagtgagccgagattgcaccactgcactccagcctgggcaacagagcaagactctgtcttttaaaaaaaaactaattaattaattaattttaaaaactacttactatcatttaatacctatcagtgttcatatttcccccacttgtcaaaaatatcttgtt-attcagcagcaaagcagaagagaaaaagaaaaaaaaagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40197 448 + 190779 ATATAACCACAATACCTTATCAGAGCCAAAACAAATATGGCCGcacacctgtaatcccaacactttgagagactgaggcgggcagatcacctgaggccagaaattcaagaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattagctaggcatggtggcgggtacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggaggtggaggttgcagtgagccgagattgcaccactgcactccagcctgggcaacagagcaagactctgtcttttaaaaaaaaaCtaattaattaattaatttaaaaaactacttaCTATCATTTAATACCTATCAGTGTTCATATTTCCCCCACTTGTCAAAAATATCTTGTT-ATTCAGCAGCAAAGCAGAAGAGAAAAAGAAAAAA-AAgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2192 447 + 106623 ATATAACCACAATACCTTATC-GAGCCAAAACAAATATGGCCGcacacctgtaatcccaacactttgagagactgaggcaggcagatcacctgaggccagaag-tcaagaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattagctaggcatggtggtgggtacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaactagggaggtggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacagagcaagactctgtctttaaaaaaaaaaTTAATTAATTAATTAATTTTAAAAACTACTTACTATCATTTAATACCTATCAGTGTTCATATTTCCCCCACTTGTCAAAAATATCTTGTT-ATTCAGCAGCAAAGCAGAAGAGAAAAAGAAAAAAAAAgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814214 443 + 123690457 atataaccacaataccttatcagagccaaaacaaatatggctgcacacctgtaatcccaacactttgggagactgaggcaggcagatcacctgaggccaggagttcaagaccagcctggccaacatggtgaaacccctgtctctaccaaaaatacaaaaattagctaggcatggtggcgggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacagagcaagactctgtctctaaaaaaaaaaataattaattaa-----tttaaaaactacttactatcatttaatacctatcagtgttcatatttcccccacttgtcaaaaatatcttttt--ttcagcagcaaagcagaagagaaaaagaaaaaaaaagg i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 864572 437 - 74750902 ataAAACCACAAAACCTTATTAGAGCTAAAACAAATGTGGCTGCA---ctgtaatcccaacactttgggaggctggagtggacagatcacctgaagccaggaatctgagaccagcctggccaacgtggcaaaatccccgtctctcctaaaaatacaagaattagctgggcatggtggcaggtgcctgtaatcccaactagtcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagccgagaccgtgccattgcactccagcctgggcaacagagcgagactccttctctaaaacaaaaacaaacaaataaa---------acaaCCACTTACTATTGTTTAATACCTATCAGTGTTAATATTTCCCCCATTTGTCAAAAATATCTTTTTTTTTCAGCTGCAAAGTAGAAAGGAAAAAGAAAAAA-AAgg i calJac3.chr17 I 2843 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e otoGar3.GL873829 375438 514 - 608964 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=327348.000000 s hg38.chr3_KI270779v1_alt 74251 323 + 205312 Tcagatgtggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtt-----------tgagaccagcct-----------------gggtacaatagcgagactcagtctctacaaaaaaaaaat------------ttgtttaaaaattagcaa-ggtgtgttgatgttcaccta-------------------------tagtcccagc--------------tattcagaaggc---tgaagtgagaaaattgcttgagccccagaag--------ttgcggctgcagcgagctgtgaccataccactgcattcc--agtctgctgcaccgagtgagaccatgtctcaaaaaaaaaaaaaaaaa-----------------------------------------aaaaaaaaaaagaaagaa s panTro5.chr3 200059569 310 + 202621043 tcagatgtggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtt-----------tgagaccagcct-----------------gggtacaatagcgagactcagtctctacaaaaaaaaaaa----------aattgtttaaaaattag-----gtgtgttgatgttcaccta-------------------------tagtcccagc--------------tattcagaaggc---tgaagtgagaaaattgcttgagccccagagg--------ttgcggctgcagcgagctgtaaccataccactgcattcc--agtctgctgcaccgagtgagaccatgtctcaaaaaaaaaaaaagaaa----------------------------------------------------gaaagaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40645 316 + 190779 tcagatgtggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtt-----------tgagaccagcct-----------------gggtacaatagcgagactcagtctctacaaaaaaaaat-------------ttgtttaaaaattag-----gtgtgttgatgttcaccta-------------------------tagtcccagc--------------tattcagaaggc---tgaagtgagaaaattgcttgagccccagagg--------ttgcggctgcagcgagctgtaaccataccactgcattcc--agtctgctgcaccgagtgagaccatgtctcaaaaaaaaaaaaaaaaa-------------------------------------------gaaagaaaagaaaGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2639 318 + 106623 tcagatgtggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtt-----------tgagaccagcct-----------------gggtacagtagcgagactcagtctctacaaaaaaaaaat------------ttgtttaaaaattagcaagggtgtgttgatgttca-cta-------------------------tagtcccagc--------------tattcagaaggc---tgaagtgagaaaattgcttgagcccagaggg--------ttgcggctgcagcgagctgtgaccataccactgcattcc--agtctgctgcaccgagtgagaccatgtctcaaaaaaaaaaaaaaaga----------------------------------------------aaaaaagaaagaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814657 335 + 123690457 tcaggtgcggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtt-----------tgagaccagcct-----------------gggtacaatagtaagactcagtcgctacaaaaaatt---------------ttgtttaaaaattagcaa-ggtgtgttgatgtccaccta-------------------------ta-------------------------------------------gggaaaattgcttgagccccagagg--------ttgcagctgcagcgagctgtgatcgtaccactgcattcc--agtctgctgcactgagtgagaccatgtctcaaaaaaaaaaaaCgaaagaacgaacgaacgaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 865009 317 - 74750902 ctgagcgtggtggctgatgcctgtagtcccagcacttcgggaggtcaaggtgggaggatcacttgagctgaggagtt-----------tgagaccagcct-----------------gaggacaatagcaagactcggtctctacaaattg-----------------ttttttttaaattagcca-agtgtgttg-tgcacacctg-------------------------tagtcccagc--------------tattcagaaggc---tgaagtgggaaagtggcctgagccccagagg--------ctgaggatgcagcaacccatgactgtaccactgcactgc--agtctgctcgacccagggagaccgcgtctcaaaaaaataaaataaaa-----------------------------------------taaagaaGGAAGGCAGGA i calJac3.chr17 C 0 I 1877 s otoGar3.GL873829 375952 392 - 608964 ccgggtgttgtggtgggtgcctatagtcccagctacttgggaggctgaggcaagagtattgcctaagtccaagagctggaagtttctgtgagttgtgcctccacagcactctaccaagggtgacaaaatgagactccatctctaaaaaaaaaaaaTAATAATAATAAAGCGTAATAGAGATAGGAA-TGAATGCTA-TGTTAGAATAGGTTTTCAGGGTAGAGGGAAAAAATTAGTCCCAGCATAGATCTAATTTATTTTTAAAAACCATTTATAATGGAAAATT---TCAAACACAAGCAgggtagtgcctgtggctcaaaggagtagggtgcccgcc-ctatatgccagaggtggcaggttcaaacccagccccggccaaaaaaaaaaaaaaaaaa----------------------------------------------------------- i otoGar3.GL873829 I 514 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=1910.000000 s hg38.chr3_KI270779v1_alt 74574 2 + 205312 ag s panTro5.chr3 200059879 2 + 202621043 ag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40961 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2957 2 + 106623 ag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814992 2 + 123690457 ag i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e otoGar3.GL873829 376344 0 - 608964 C e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29030822 1572 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=236759.000000 s hg38.chr3_KI270779v1_alt 74576 244 + 205312 aaaaatgcctttttacagctggtttattcaagtcaagatccaaaaaagat-acgcacac-atgtttaactagc-----atatttcttaaatgtctttaaatctat---acctagatcagtgccat-tttttcatgtc---------------atttag-ctgttgaacgaaccaggtactgtgtcctgcggcatatcc-taccttctgggtttgactgattga-atctttgtggatgtccctctg-cctctgtct------ttcctgaa------ctctggtagtt s panTro5.chr3 200059881 242 + 202621043 aaaaatgcctttttacagctggtttattcaagtcaagatccaaaaaagat-atgcacac---gtttaactagc-----atatttcttaaatgtctttaaatctat---acctagatcagtgccat-tttttcatgtc---------------atttag-ttgttgaacaaaccaggtactgtgtcctgcagcatatcc-taccttctgggtttggctgattga-atccttgtggatatccctctg-cctctgtct------ttcctgaa------ctctggtagtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 40963 242 + 190779 aaaaatgcctttttacagctggtttattcaagtcaagatccaaaaaagat-atgcacac---gtttaactagc-----atatttcttaaatgtctttaaatctat---acctagatcagtgccat-tttttcatgtc---------------atttag-ttgttgaacgaaccaggtactgtgtcctgcggcatatcc-taccttctgggtttggctgattga-atccttgtggatgtccctctg-cctctgtct------ttcctgaa------ctctggtagtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 2959 246 + 106623 aaaaatgcctttttacagctggtttattcaagtcaagatccaaaaaagat-acgcacat-atgtttaactagc-----atatttcgtaaatgtctttaaatctat---acctagatcagtgccat-tttttcatgtc---------------atttagtttgttgaacgaaccaggtactgtgtcctgcggcatatccttaccttctgggtttggctgattgc-atctttgtggatgtccttctg-cctctgtct------ttcctgaa------ctctggtagtt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120814994 245 + 123690457 aaaaacgcctttttacagctggcttcttcaagtcaagatccaaaaaagataacgcacac-atgtttaactagc-----atatttcttaaatgtctttaaatctat---acctagatcagtgccat-tttttgatgtc---------------atttag-ttgttgaacgaaccaggcactgtgtcccgcggcatatcc-taccttctgggtttggctgattga-atctttgtggatgtcgctctg-cctccgtct------ttcctgaa------atctggtaatt i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 376344 212 - 608964 ---------ttttcaaa---------cacaagcaaaggt--agagagaat-a----------gtataatgaactcaatgtacctgttaaccagcttcaaaattatcaaattttgctcaggttcttatctttcatat-----------------------ttaaaaaacata------actatg---------atactt-ta---tcagagctaaaataattgctatcatttggtatctatcacta-ttcctatttcctcacttgttaaaatgcctttttaatagtt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29032394 252 + 31377067 aaaaagacctttttgcaattggcttatccaa-tcaggatccaaacaaggt-ccacaagttatatttaactggt-----atatttcttaagccccttcaaatctat-----------cagtcccct-tttcctttttcttcaagctgttttttttttaa-ttattgaataaaccaggtgatttgttctgtagaatgtcc-tacactctggatttatctgattga-acccatgtggatgcccctctgtcccctacat------ttgctgaa------acctggtaatt i canFam3.chr33 I 1572 I 234 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=43820.000000 s hg38.chr3_KI270779v1_alt 74820 49 + 205312 gag-----atcaggactggagatttcttaggcaggaagaatccataggtgg------gta s panTro5.chr3 200060123 49 + 202621043 gag-----atcaggactggagatttctttggcaggaagaatccataggtgg------gta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41205 49 + 190779 gag-----atcaggactggagatttctttggcaggaagaatccataggtgg------gta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3205 49 + 106623 gag-----atcaggactggagatttctttggcaggaagaatccataggtgg------gta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815239 54 + 123690457 gagatgaaatcaggactggagatttctttgacaggaagaatccatagatgg------gta i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 376556 44 - 608964 ggc----------------tGTttcttttggcaagaatcttccataggtgaggttgtgta i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e canFam3.chr33 29032646 234 + 31377067 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=191469.000000 s hg38.chr3_KI270779v1_alt 74869 158 + 205312 cttcctatcgcacctcgaaggagacacaaagtgtccagctgtcccacttttactggtg-ttaaacttcatccaccagata--------gtgcacccattataaaatt----------ctgtccactaatgattt-------------------gtgctgagatcca-cttctcattaggggctgccaagtagtgctt s panTro5.chr3 200060172 158 + 202621043 cttcctatcgcgccttgaaggagacacaaagtgtccagctgtcccacttttactggtg-ttaaacttcatccaccagata--------gtgcacccattataaaatc----------ctgtccactaatgattt-------------------gtgctgagatcca-cttctcattaggggctgccaagtggtgctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41254 158 + 190779 cttcctatcgcgccttgaaggagacacaaagtgtccagctgtcccacttttactggtg-ttaaacttcatccaccagata--------gtgcacccattataaaatc----------ctgtccactaatgattt-------------------gtgctgagatcca-cttctcattaggggctgccaagtggtgctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3254 157 + 106623 cttcctatcgcacctcgaaggagacacaaagtgtccagctgtcccacttttactggtgtttaaacttcatccaccagata--------gtgcacccattataaaatt----------ctgtccactaatga-tt-------------------gtgctgagatcca-cttctcatta-gggctgccaagtagtgctt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815293 158 + 123690457 cttcctattgtgcctcgaaggagacacaaagtgtccagctgtcccacttttactggtg-ttaaacttcatccaccagata--------gtgcacccattataaaatt----------ctgtccactaatgattt-------------------gtgctgagatcca-ctttttattaggggctgccaagtagtgctt i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 376600 188 - 608964 atttttattgtgtcttgaaagagacacaaaatgtctagttgtccctcttttactggct-ttaaacttggccagccaaata--------gcacatccattataaaagttccccatcaactcttctctaatggttttagtctccactgttgatggttgcttggatccgttttttcattagggcttaccatgtggtgttt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29032880 191 + 31377067 cttcctgttgcatcccaaagaagacacccgaagtccagtggtcccac-cttgct-atg-ttaaccttgatctgccagatgcatctgttgtaggtcccttataaacattcccctgcaacctttctccagtggttt-taatcccggcgttgattgttgcttagatcca-attttc-ttatgggtcaccgaatgctggct i canFam3.chr33 I 234 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e dasNov3.JH569502 3856459 2056 + 6579706 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=70532.000000 s hg38.chr3_KI270779v1_alt 75027 52 + 205312 ttct-a------tcatt-ctttctgcacttgttagccgaaggt-tctctgtcgtgaagata s panTro5.chr3 200060330 52 + 202621043 ttct-a------tcatt-ctttctgcacttattagccgaaggt-tctctatcgtgaagata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41412 52 + 190779 ttct-a------tcatt-ctttctgcacttgttagccgaaggt-tctctatcgtgaagata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3411 52 + 106623 ttct-a------tcatt-ctttctgcacttgttagccgaaggt-tctctatcatgaagata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815451 52 + 123690457 ttct-a------ttgtt-ctttctgcacgtgttggccgaagtt-tctctatcgtgaagata i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 376788 55 - 608964 ttctaa------ttgtcactttctgtgtttattagctggagttctttttatcagcaagacc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29033071 55 + 31377067 ttct-agctctgtcact-ccttctgcatttcttagctgcaatt-cttctat---aaagact i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3858515 52 + 6579706 ttct-a------tcatg-tcttctgcatttattagctagaatt-cttccaaaaagaagacc i dasNov3.JH569502 I 2056 C 0 e proCoq1.NW_012133858v1 7383740 2749 + 22200726 I e micMur3.chr1 25862827 2814 - 114275543 I e mm10.chr16 65397820 1273 - 98207768 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=233340.000000 s hg38.chr3_KI270779v1_alt 75079 86 + 205312 --------------tttcccttgtcaactatttggcttggatggaaaggctggatcaatgtttgattctttatttttcatcttcataataatgagctagc s panTro5.chr3 200060382 86 + 202621043 --------------tttcccttgtcaactatttggcttggatggaaaggctggatcaatgtttgattctttacttaccattttcataataatgagctagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41464 86 + 190779 --------------tttcccttgtcaactatttggcttggatggaaaggctggatcaatgtttgattctttacttaccattttcataataatgagctagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3463 84 + 106623 --------------tttcccttgtcaacta-ttggcttggatggaaaggctggatcaatgtttgattcttta-ttatcattttcataataatgagctagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815503 86 + 123690457 --------------tttcccttgtcaactattttgcttggatggaaaggctggatcaatgtttgattctttctttatcattttcgtaataatgagctagc i nomLeu3.chr11 C 0 C 0 s micMur3.chr1 25865641 86 - 114275543 --------------tttcccttatcaactatttggtttgtacagaaaggctggataaatgtttgagtctgtatttatgactttcataataatgagctagc i micMur3.chr1 I 2814 C 0 s proCoq1.NW_012133858v1 7386489 86 + 22200726 --------------tttcccttatcaactatttggttTGTACAGAAAGGCTGGATAAATGTTGGAGTCTGCATTTATGACTTTCATGATAATGAGCTAGT i proCoq1.NW_012133858v1 I 2749 C 0 s otoGar3.GL873829 376843 82 - 608964 --------------tttcccttatcagctatttggtttgcatggaaaggctagataaatgtctgagtc----tttatgactttcataataacgagctagc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29033126 86 + 31377067 --------------tttcccttgtcaaccacttggcttgtatggaaaggctggataaatgtttaattcttcatttaccattttcaggataatgagcctgt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3858567 83 + 6579706 tttcctcatcaactatttcctcatcaactctttggtttgtatggaaaaactggataaacatttgattc---attTATTGCCTTATT-------------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65397820 1273 - 98207768 I e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=135700.000000 s hg38.chr3_KI270779v1_alt 75165 48 + 205312 tcctcggcacccCGGGGGAAGTTGTCTTCAAATGCTgccttgaagcat s panTro5.chr3 200060468 48 + 202621043 tcctcggcaccccgggggaagttgtcttcaaatgctgccttgaagcat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41550 48 + 190779 tcctcggcaccccgggggaagttgtcttcaaatgctgcctggaagcat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3547 47 + 106623 tcctcagcacccC-GGGGAAGTTGTCTTCAAATGCTgctttgaagcat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815589 48 + 123690457 tcctcagcaccctGGGGGAAGTTGTCTTCAAATGCCgccttgaagcat i nomLeu3.chr11 C 0 C 0 s micMur3.chr1 25865727 48 - 114275543 tccttggcaaccCTggggaggttggagtcaagtgcagccttgaagtat i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7386575 48 + 22200726 TCCTTGGCAACCCTggggaggctggagtcaaatgcagccttgaagtac i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 376925 48 - 608964 tccttagcaaccctggagaggttggatttaaatgcagccttgaagtat i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65399093 48 - 98207768 tcctttatagctgaaGGAAGGCTGGGTTCAAGTGTGACCTTGATATGT i mm10.chr16 I 1273 C 0 s canFam3.chr33 29033212 48 + 31377067 tccttagcaacccagggaagaatgaatttAAACATGACcttgaaggag i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3858650 48 + 6579706 GCCTTAGCAAttctgtaaaggtggaatttaaatgtgaccttgaagtac i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 360826 5169 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 865326 1877 - 74750902 I e saiBol1.JH378146 402334 4318 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=8281.000000 s hg38.chr3_KI270779v1_alt 75213 1 + 205312 a s panTro5.chr3 200060516 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41598 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3594 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815637 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867203 1 - 74750902 A i calJac3.chr17 I 1877 C 0 s saiBol1.JH378146 406652 1 + 17725628 A i saiBol1.JH378146 I 4318 C 0 s cebCap1.NW_016107444v1 365995 1 - 6778120 a i cebCap1.NW_016107444v1 I 5169 C 0 s micMur3.chr1 25865776 1 - 114275543 a i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 7386624 1 + 22200726 a i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 376974 1 - 608964 a i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65399141 1 - 98207768 A i mm10.chr16 C 0 I 1 s canFam3.chr33 29033260 1 + 31377067 a i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3858698 1 + 6579706 a i dasNov3.JH569502 C 0 I 1 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=1149059.000000 s hg38.chr3_KI270779v1_alt 75214 197 + 205312 gaatatttaattctaatggatatgggagggaagggccttccaa-gccgagggaagagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaaCAGCA--GAGC---TCCGTAGCACGTGCAACAAGAGGCTTTTTGAGTGAGGACCCTGAGCACGATATGGTG-GGAAAGCAGGGGAGAGGTCA-GGATTGCTG s panTro5.chr3 200060517 195 + 202621043 gaatatttaattctaatggatatgggagggaagggccttccaa--ccgagggaacagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaacagCA--GAGC---TCCGTAGCACGTGCAACAAGAGGCTTTTTGAGTGAGGACCCTGAGCACGATATGGTG-GGAAAGC-GGGGAGAGGTCA-GGATTGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41599 196 + 190779 gaatatttaattctaatggatatgggagggaagggccttccaa-gccgagggaagagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaacagca--gagc---tccgtagcacgtgcaacaagaggctttttgagtgaggaccctgagcacgatatggtg-ggaaagc-agggagaggtca-gGATTGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3595 196 + 106623 gaatattttattctaatggatatgggagg--aaggccttccaaggccgagggaacagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaacagca--gagc---tcggtagcacgtgcaacaaaaggctttttgagtgaggaccctgagcacgatatggtg-ggaaagc-agggagaggtcagGGATTGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815638 196 + 123690457 gaatattttgttctaatggatatgggagggaagggccttctaa-gccaagggaacaacttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttag-gaacagca--gagc---tcagtAGCACATGCAACAAGAGGCTTTTTGAGTGAGGACCCTGAGCACGATATGGTG-GGAAAGCAGGGGAGAGGTCA-GGATTGCTG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867204 195 - 74750902 GAATATTTTCTTCTAAtggatacgggaggggagagccttccaa-gcagagggaacagcttgagc-aaggctcagaggcaggag--------------------------------------aaggtagggtgtttggagaaCAGCA--GGGC---TCGGTAGCACGTGCAACAAGAGGCTTTCTGAGTGAGGATCCTGAGCATAACGTGGTG-GGAAAGC-AGGAAGAAGTCA-GGATTGCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 406653 196 + 17725628 GAATATTTTCTTCTAATGGATACGGgagggaaaagccttccaa-gcagagggaacagctcgagcaaaggctcagaggcaggag--------------------------------------aaggtagggtgtttagagaacagca--gggc---tcaggagcacgtgcagcaagaggcttttggagtgaggaccctgagcataacgtggtg-ggaaagc-agggagaagtca-ggattgccg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 365996 196 - 6778120 gaatattttcttctaatggatacgggagggaagagccttccaa-gcagagggaagagctggagcaaaggctccgaggcaggag--------------------------------------aaggtagggtgtttagagagcagca--gagc---tcggtagcacgtgcaagaagaggctttttgagtgaagaccctgagcataatgtggtg-ggaaagc-agggAGAAGTCA-GGATTGCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22768 196 - 69927 GAATATTTTCTTCTAAtggatacgggagggaagagccttccaa-gcagagggaacagcttgagcaaaggctcagaggcaggag--------------------------------------aaggtagggtgtttagagaacagca--gagc---tcggtAGCACGGGCAGCAAGAGGCTTTCTGAGTGAGGACCCTGagcataacttggtg-ggaaagc-agggagaagtca-ggattgctg i aotNan1.NW_018503669v1 N 0 C 0 s micMur3.chr1 25865777 200 - 114275543 gaatattttcttctagtgggtatgggagggaagggccttctaa-gcagaagaaacaacttaagcatagaatcagaggccacag--------------------------------------aatgcgggctgtttagagaacagca--gagatcgTTAGTAGCATGTGCAACAAGAGGCTTTTTGAGTGAGAAGCCTAAGCACTATGTGGAG-GGAAAACAGGGAAGAAGTCA-GGATTGCTG i micMur3.chr1 C 0 I 275 s proCoq1.NW_012133858v1 7386625 200 + 22200726 gaatattttcttctagtggatatgggagggaagggccttctaa-gcggaggaaacagcttaagcaaagactcagaggccagag--------------------------------------aatgcgggctgtttagagaacagca--gagatggtcagtAGCATGTGCAACAAGAGGCTTTTTGAGTAAGAAGCCTGAGCATGATGCGGTG-GGAAAGCAGGGAAGAAGTCG-GGATTGCTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 376975 198 - 608964 gaatatttttttctagtggatatgggagggaagggccttctaa-gcaaaggaaacagcttaaggaaagactcagaggccagag--------------------------------------gatgcaggctgttcagagaacagca--gagatggtcagaagcatgtgtagtaggaggctttttgagtgagaagcctgagcatgat--ggtg-ggaaagcagggaagagatcA-GGATTGCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399143 142 - 98207768 GAACCATTTCTGCTAATGGATTTGG-----ACAGGCCTCCCAA-GCTGATGACACAGCATACACCAAGGCTCAGAAGCAGGTG--------------------------------------CAGGCAAGGT-------------------------------------------------------GTGACACTCTTGGGAGCGGGGTGATA-GGAAAGCCAGAAAGATGCTG-CTTCTCCAG i mm10.chr16 I 1 C 0 s canFam3.chr33 29033262 224 + 31377067 gaatgctttcctttagtggctatgggagggaagcgcttac----acagaggagacagcttgagcaaagactccagagcagcagtatgcagggtggttttgttttgttttgttttgttttttaatgcagggtgttgagAGAGTGGCA--GAGA---TCGGTAGCAAGTGTAACAACAGGTTGTGTGAATgagaagcccg--------gtgcgg-aaaaagcagggaggcagtca-gaattgtcg i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3858700 198 + 6579706 ggatgctttcttctagttaatatggaaggaaaggatcttccaa-ttagagtaa--aacttaagcaaagtctcaagagcaggag--------------------------------------aattcagggtgttcagagaatggcaaggaga---gcagtgtTAAGTGCAACAAGAGGGCTTTTGAGTGAGAGCCCTAagcatggtatagtgagaaaagcagtggagaagtca-ggaatgctg i dasNov3.JH569502 I 1 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=22743.000000 s hg38.chr3_KI270779v1_alt 75411 3 + 205312 GTT s panTro5.chr3 200060712 3 + 202621043 GTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41795 3 + 190779 GTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3791 3 + 106623 GTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815834 3 + 123690457 GTT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867399 3 - 74750902 GTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 406849 3 + 17725628 gtt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366192 3 - 6778120 GTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22964 3 - 69927 gtt i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7386825 3 + 22200726 GTC i proCoq1.NW_012133858v1 C 0 I 18 s otoGar3.GL873829 377173 3 - 608964 GTC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65399285 3 - 98207768 GTT i mm10.chr16 C 0 I 6 s canFam3.chr33 29033486 3 + 31377067 gtt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3858898 3 + 6579706 gtt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25865977 275 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=25259.000000 s hg38.chr3_KI270779v1_alt 75414 9 + 205312 TGACTCCCA s panTro5.chr3 200060715 9 + 202621043 TGACTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41798 9 + 190779 TGACTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3794 9 + 106623 TGACTCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815837 9 + 123690457 TGACTCCCA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867402 9 - 74750902 TGACTCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 406852 9 + 17725628 tgactccca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366195 9 - 6778120 TGCCTGCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22967 9 - 69927 tgactccca i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 377178 7 - 608964 CAATTCA-- i otoGar3.GL873829 I 2 I 6 s mm10.chr16 65399294 7 - 98207768 CAGCTCA-- i mm10.chr16 I 6 C 0 s canFam3.chr33 29033489 9 + 31377067 ctcctccca i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3858901 9 + 6579706 ctacttcca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7386828 18 + 22200726 I e micMur3.chr1 25865977 275 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=419198.000000 s hg38.chr3_KI270779v1_alt 75423 100 + 205312 G-----------------------CCATGGGCAAAAGGTTCTCCCCTT------------------GTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggccccagttcactttaataaatac s panTro5.chr3 200060724 100 + 202621043 G-----------------------CCACGGGCAAAAGGTTCTCCCCTT------------------GTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggccccagttcactttaataaatac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41807 100 + 190779 G-----------------------CCACGGGCAAAAGGTTCTCCCCTT------------------GTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggccccagttcactttaataaatac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3803 98 + 106623 G-----------------------CCACGGGCAAAAGGTTCT-CCCTT------------------GTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggccccagtt-gctttaataaatac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815846 100 + 123690457 G-----------------------CCATGGGCAAAGGGTTCTCCCCTT------------------GTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggcccccattcactttaataaatac i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867411 122 - 74750902 GCTGTGTCAACAACTGAAGCATGACCACCGGAAAAGGGCTCTCCCCTC------------------GTCTACGCAATGAGGACATCTGTCTAGATcagtggctttcacacgtttctgg-cccaattcacatgaataaatac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 406861 123 + 17725628 gctgtgtcaacaactaaagcatgaccacgggcaagGGGCTCTCCCCTT------------------GTCTATGCAATGAGGACATCTCTCTAGCTcaatggctttcacacgtttctggccccaattcacattaataaatac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366204 104 - 6778120 GCTGTGTCAACAACTAAAGCATGACCACGGGCAAAGGGCTCT-CCTTT------------------GTCTACGTAA------------------Tcagtggctttcacatgcttctggccccaattcatattaataaatac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 22976 123 - 69927 gctgtgtcaacaactaaagcatgaccgtgggcaaAGGGCTCTCCCGTT------------------GTCTACACGATGAGGACGTCTCTGTAGATcagtggctttcacgcgtttctggccccagttcacatcagtaaacac i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7386846 100 + 22200726 -----------------------GCCTTGAACAAACGGCTCTTCCCTC------------------ATCAATAAAATGAGGGCATCTCTCTAGATcagtggctttcaaatgtttctggccccaatccacattattaaatag i proCoq1.NW_012133858v1 I 18 I 56 s otoGar3.GL873829 377191 99 - 608964 -----------------------ACCTTGGA-AAATAGCTCTTTGCTC------------------ATGAATTAAATGAGGGCATTTCTCTAGATcagtgggtttcaaatgtttctgaccccaatccacattcataaatac i otoGar3.GL873829 I 6 C 0 s mm10.chr16 65399301 93 - 98207768 -----------------AGCATGGCTTTGGGTA------CCATCCTCC------------------ATCTATAGAATGAGAGCCTCTCTCTAGA-------CTTTCAGGCTTTTCTGGCTCCGATCCATTTTTACAAGCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29033498 101 + 31377067 gctctgtctcccactcaagcatgacctttggaaaacggcttttccatt----------------------------------------tctagATcagtagctttcaaacttttctggccacaattcacattaatgaatat i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3858910 141 + 6579706 gctctgtcactaattcaagcatgaccttgggcacattacttttccattctgagtgtcagctaccccatctctaaaatgaagagattgctctagatcagtgactttcaaacttttctggccacagttcatatttgtgaatat i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25865977 275 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=305278.000000 s hg38.chr3_KI270779v1_alt 75523 95 + 205312 attttatactctgacccagtaagtgcatctgtgtgtataaaaaccaacagaaatttcaaaa-agaactcag-------ttgactttt---acatacaatgtatgtg s panTro5.chr3 200060824 95 + 202621043 attttatactctgacccagtaagtgcatctgtgtctataaaaaccaacagaaatttcaaaa-agaactcaa-------ttgactttt---acatacaatgtatgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 41907 95 + 190779 attttatactctgacccagtaagtgcatctgtgtctataaaaaccaacagaaatttcaaaa-agaactcaa-------ttgactttt---acatacaatgtatgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3901 95 + 106623 attttatactctgacccagtaagtgcatctgtgtgtataaaaaccaacagaaatttcaaaa-agaactcaa-------ttgactttt---acatacaatgtatgtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120815946 95 + 123690457 attttatactctgacccagtaagtgcatccgtgtctataaaaaccaacagaaatttcaaaa-agaactcaa-------ttgactttt---acatacaacgtatgtg i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867533 95 - 74750902 atgttatacttttacccagtaaatgcatccatgtgtgtaaaaaccaacaaaagcttcagaa-agaactcca-------tttactttt---acatgcagcgtatgtg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 406984 92 + 17725628 atg---tacttttacccagtaagtgtatccatgtatgtaaaaaccaacaaaaacttcagaa-agaactccg-------tttactttt---acacgcagtgtatgtg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366308 95 - 6778120 atgttatacttttacccagtaagtgcatccatgtacgtaaaaaccaacaaaaacttcagaa-agaactcca-------tctactttt---acatgcagcgtatgtg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23099 93 - 69927 gttt--tacttttacccagtaagtgcatccgtgtgtgtaaaaaccaacagaaacttcagaa-agaactctg-------tttactttt---acatgcagtgtgtgtg i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 377290 70 - 608964 ----tatactctgacctagtagaggcatacatgtatataaaaacaaataaaa------------aGATCTa-------tt--ctatc---ccatccca-------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399394 82 - 98207768 TAATTGTTCTGTGACCTAGTTCACTCATCCATG-------GAGCTAAGGCAACTTTTAAAG-------CAA-------CTTATTCTT---GTATTTAATGCATGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29033599 99 + 31377067 attatacacggtgattcagtgcacacgtacatgtatataaaaac----aaaaatttcaaaaaagaactccaaataacttataattat---atatatgatgtatgtg i canFam3.chr33 C 0 I 30 s dasNov3.JH569502 3859051 97 + 6579706 actctacactgtcagtcagtacatacatacatgtatataaaatcaaacaaatttcaaagaa-aaaaccggt-------tttactcctatgatatacaatgt-tgag i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7386946 56 + 22200726 I e micMur3.chr1 25865977 275 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=314299.000000 s hg38.chr3_KI270779v1_alt 75618 92 + 205312 ggtctattctattctatttcattcag----------tgtcatcctgt--------------------------------------------tgaaataaatgttggttatgaccactgaattgaactcagtctcacagattgtcgg s panTro5.chr3 200060919 92 + 202621043 ggtctattctattctatttcattcag----------tgtcatcctgt--------------------------------------------tgaaataaatgttggttatgaccactgaattgaactcagtctcacaaattgtcgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42002 92 + 190779 ggtctattctattctatttcattcag----------tgtcatcctgt--------------------------------------------tgaaataaatgttggttatgaccactgaattgaactcagtctcacaaattgtcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 3996 92 + 106623 ggtctattctattctatttcatgcag----------tgtcatcctgt--------------------------------------------tgaaataaatgttggttatgaccactgaattgaactcagtctcacaaattgtcgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816041 86 + 123690457 gg-----tctattctatttcattcag----------tgtcatcctgt--------------------------------------------tgaagtgaatgttggttatg-ccaccgaattgacctcagtctcacaaactgtcgg i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867628 76 - 74750902 ggcctatcctattctgtttcattCAG----------CGTCATCCCGT--------------------------------------------TAAAATATGT--------------CTGAG--GCTCTCAGACTCACAGATGGTTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407076 92 + 17725628 ggtctatcctattctatttcattcaa----------cgtcatcctgt--------------------------------------------taaaataaatgttggttatgaccactgaattgctctcagactcacaaatggtttg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366403 91 - 6778120 ggtcta-cctattctatttcattcag----------tgtcatcctgt--------------------------------------------taaaataaatgttggttatgaccactgaattgctctcagactcacaaatggtttg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23192 91 - 69927 ggtctaccctactc-atttcattcaa----------cgtcatcctgt--------------------------------------------taaaataaacgatggttatgaccactgcattggcctcagactcacaaatggtttg i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7387002 91 + 22200726 gttctaatccattccattccatccct----------ttccatcttat--------------------------------------------taaaataaatgttggtcatgaccactgaattgatctttgactcacag-tggtcta i proCoq1.NW_012133858v1 I 56 C 0 s otoGar3.GL873829 377360 83 - 608964 ------acccatcccattcaatccca----------ttccatcctat--------------------------------------------TAAAATAAATATTGGTCATAACCGCTGAATTCACCTCTGAGT--CAA-TGTTCTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399476 114 - 98207768 GGTCTATTTGGTTCAATTTAATTCTGCCTGGCTCCATTCCATCCTGT-------------------GTCACACTGCCCA--TCAGTCACAGTAAAGTAAAC----------ACCATCGGATTGATCTCTGATTCACAAACAAGGC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29033728 136 + 31377067 attccattccattccattccattcca----------ttccattctattcctttccattctcttccatccattttgctccattccatcttactaaaataaatgccagtcatgaccactgaattgatttctgactcacatatgtgcta i canFam3.chr33 I 30 C 0 s dasNov3.JH569502 3859148 82 + 6579706 gatgtttccttttccattccagtcta--------------------g--------------------------------------------taaaatgaatgctggccatgactcctgaatcaatctttgacttatcaatggCCTA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25865977 275 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=463959.000000 s hg38.chr3_KI270779v1_alt 75710 90 + 205312 caac-cttagtctgGGTGGCTCCTGGGGCTCTATTTCCACTCCAGCCCTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGCAC s panTro5.chr3 200061011 90 + 202621043 caac-cttagtctgGGTGGCTCCTGGGGCTCTATTTCCACTCCAGCCCTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42094 90 + 190779 caac-cttagtctgGGTGGCTCCTGGGGCTCTATTTCCACTCCAGCCCTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4088 89 + 106623 caac-cttagtctgGGTGGCTCCT-GGGCTCTATTTCCACTGCAGCCCTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816127 90 + 123690457 caac-cttagtctgGGAGGCTCCTGGGGCTCTATTTCCACTCCAGCCATTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGGAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867704 89 - 74750902 CAAG-CTTAGTCT-GATGGTTCCTGGGGCTCTGTTTCTGCTTCAGCCCTTTCTGGTTGATCCCCGGTCTCAGTGACAACCTGATACAGGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407168 89 + 17725628 caag-cttagtct-gaTGGTTCCTGCAGCTCCATTTCTGCTTCAGCCCTTTCTGGTTGATCCCCGGTCTCAGTGACAACCTGATACAGGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366494 89 - 6778120 caag-cttagtct-gaTGGTTCCTGGGGCTCTGTTTCTGCTTCAGCCCTTTCTGGTCGGTCCCTGGTCTCGGTGACAACCTGATACAGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23283 82 - 69927 caag-cttagtct-gaCGGTTCCTGGGGCTCTATTTCTGCTTCAGCGCTTTCTGGTTGATCC-------TGGTGACAACCGGATACAGGAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25866252 90 - 114275543 CAAC-CCTAGTTTGGATGGTTCCTGGGGCTGTATTTCAGCCCCAACCCTCTATGACTGGTCCCTACTCTTGGTGACAACCTGATGCTGGAC i micMur3.chr1 I 275 C 0 s proCoq1.NW_012133858v1 7387093 90 + 22200726 caac-cctagtttggaTAGTTCCTGGGGCTCTATTTCAGCCCCAACCCTCTCTGACTGGTCCCTAGTCTTGGTGACAACCTGATGCTGGAC i proCoq1.NW_012133858v1 C 0 I 9 s otoGar3.GL873829 377443 90 - 608964 TAAC-CCTAGTTTGGATGGTTCCTGGGGCTCTATTTCAGGCCTAACCCTCTCTGACTGGTCCCTGGTCTTGGTGACAACCTGATGCTGAAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399590 55 - 98207768 CACC-CTTCATTTGGACGCTTC------------TCCCACCCTTGCTCTT--TAGTTGATTCTTGGTCTT--------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29033864 90 + 31377067 caactctttgtttggataaTCTCTAGGGCTTTTTTCCATATCCAGCCCTCTTTGATCCATCC-TGGTATTGGTGACAACCTGGCACTGAAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859230 80 + 6579706 GAAC-ACTAGTTCAGATGGTCCTTGGGGTT--AATTCCTCTGCAGACC-CTCTGATTGGTACCTGG---TGATGA----CTGATGCTGGAC i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=34300.000000 s hg38.chr3_KI270779v1_alt 75800 11 + 205312 CAGGCTCTGGA s panTro5.chr3 200061101 11 + 202621043 CAGGCTCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42184 11 + 190779 CAGGCTCTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4177 11 + 106623 CAGGCTCTGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816217 11 + 123690457 GAGGCTCTGGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867793 11 - 74750902 CAGGATCTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407257 11 + 17725628 CGGGATCTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366583 11 - 6778120 CAGGATCTGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23365 11 - 69927 CAGGATCTGGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25866342 9 - 114275543 -CAGCACTCG- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 377533 10 - 608964 CAGGCACTTG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399645 10 - 98207768 -AGATGCTTGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29033954 11 + 31377067 CAGGAACTTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859310 11 + 6579706 CAAGCACTTGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387183 9 + 22200726 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=740458.000000 s hg38.chr3_KI270779v1_alt 75811 123 + 205312 GAAGAGGGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AG-CCAGGC---CA-CCCTCACCTTCAGAG s panTro5.chr3 200061112 123 + 202621043 GAAGAGGGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AG-CCAGGC---CA-CCCTCACCTTCAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42195 123 + 190779 GAAGAGGGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AG-CCAGGC---CA-CCCTCACCTTCAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4188 121 + 106623 GAAGA-GGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGT-GCCCC-----------AG-CCAGGC---CA-CCCTCACCTTCAGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816228 123 + 123690457 GAAGAGGGACAATATGAGAAGGGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTCAATATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AG-CCAGGC---CA-CCCTCACCTTCAGAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867804 121 - 74750902 GAAGAGGGACAACATGAGAAGGGAAGCTGATCACTTGCAGGACGCTCCGGAGCCCAACAGGAGGCAGGAGCCAGGCTAGACTCAGAGGCTGTGGTCCC-----------AG-CCCGCC---CA-TCCTCACCGTC--AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407268 121 + 17725628 GAAGAGGGACAGCATGAGAAGGGAAGGTGGTCACTTGCAGAAGGCTCCTGAGCCCAACAGGAGGCAGGAGCCAGGCCAGACTCAGAGGCTGTGGTCCC-----------AG-CCAGCC---CA-GACTCACCGTC--AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366594 121 - 6778120 GAAGAGGGACAGCATGAGAAGGGAAGGTGGTCACTTGCAGGAGGCTCCCGAGCCCAACAGGAGGCAGGAGCCAGGCCAGACTCAGAGGCTGTGGTCCC-----------CG-CCAGCC---CA-TCCTCACTGTC--AG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23376 121 - 69927 GAAGAGGGACAGCATGAGAAGGGAAGCTGATCGCTTGCAGGAGGCTCCCGAGCCCAACAGGAGGCGGGAGCCAGGCCAGACTCCGACGCTGTGGTCCC-----------AG-CCAGCC---CG-TCCTCACCGTC--AG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25866351 124 - 114275543 GAAGAGAGACAACAGGAGAAGGGAAGCTGATCACTTGCAGGAAGCTCCTGAGCTGAACATGAGGCAGAAGCCAGGCCAAACTCAGGGGCTGCCACCCC-----------AGCCCAGCC---CA-CCCTGACCTTGAGAG i micMur3.chr1 C 0 I 86 s proCoq1.NW_012133858v1 7387192 124 + 22200726 GAAGAGGGACAACAGGAGAAGGGAAACTGATCAATTGCAGGAAGCCCCTGATCTGAACATGAGGCAGAAGCCAGGCCAAACTCAGGGGCTGCCACCCC-----------AGCCCAGCC---CA-CCCTGACCTTGAGAG i proCoq1.NW_012133858v1 I 9 C 0 s otoGar3.GL873829 377543 128 - 608964 GAAGAAGGACAACAGGAAAAGGGAAGCTAATCATTTACAGGAAGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGTCAAACTCAGAGGTTACCATCCC-----------AGTCCAGCCACACACCCCCCACCTTGGGAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399655 116 - 98207768 GAAGAGGGATGGCTTAGGGATGG-AGTAAGCCACCAGTAGGAGGCCCCTGAACTGAGTGTGA-ACTGGAGCCTG---AGGCTCA---GCCAGAGCCCC-----------AGCCCTGCC---CA-CTCTTACTTTGAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29033965 134 + 31377067 GAAGAGGGATGATGTGAGAAGGGGAACTAATCATTTGCAGGAGGCTCCTT-GCCCAACAAGAAGCAGAAGCCAGGCCAAACTCAGAGGCCATCCCCCCCAACCCCCCCGAGCCTGGCC---TG-CCGTCACCTTGAGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859321 124 + 6579706 GAAGAGCAACAAAGTGAAAAGGGAAATTAGCCATTTGCAGGAGGCTCTGGAGGTGACTGTGAGACAGGTGCCAGGCCAAATTCAGAGGCCACGGCCAC-----------AG-CCAGCC--CCA-TCCTCACCTGGAGAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=83176.000000 s hg38.chr3_KI270779v1_alt 75934 19 + 205312 TCTTGACCCCCCAGACCAC s panTro5.chr3 200061235 19 + 202621043 TCTTGACCCCCTAGACCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42318 19 + 190779 TCTTGACCCCCCAGACCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4309 19 + 106623 TCTTGACCCCCCAGACCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816351 19 + 123690457 TCTTGACCCCCCAGACCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867925 19 - 74750902 TCTTGACCTCCCAGACCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407389 19 + 17725628 TCCTGACCTCCCAGACCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366715 19 - 6778120 CCTTGACCTCCCAGACCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23497 19 - 69927 TCGTGACCTGCCAGACCAC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7387316 19 + 22200726 ATCTGACCTCCCAGGCCAC i proCoq1.NW_012133858v1 C 0 I 29 s otoGar3.GL873829 377671 19 - 608964 ATCTGACCTCCCAGGCCAC i otoGar3.GL873829 C 0 I 9 s mm10.chr16 65399771 12 - 98207768 -------GTCCCGGACCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29034099 19 + 31377067 GTCTGACCTCCCAGGCTAC i canFam3.chr33 C 0 I 9 s dasNov3.JH569502 3859445 3 + 6579706 -GTT--------------- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25866475 86 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=44613.000000 s hg38.chr3_KI270779v1_alt 75953 19 + 205312 A---------CTAC----CGGACACCTGCTGG s panTro5.chr3 200061254 19 + 202621043 A---------CTAC----CAGACACCTGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42337 19 + 190779 A---------CTAC----CAGACACCTGCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4328 19 + 106623 A---------CTAC----CAGACACCTGCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816370 22 + 123690457 A------CTTCTAC----CAGACACCTGCTGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867944 28 - 74750902 TGCTTCCCTTCCAC----CAGACACCTGCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407408 28 + 17725628 TGCTGCCTGTCCAC----CAGACACCTGCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366734 28 - 6778120 TGCTGCCCTTCCAC----CAGACACCTGCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23516 27 - 69927 CGCTTCCC-TCCAC----CAGACACCTGCTGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 377699 19 - 608964 ---------TTCAC----CAGACACCTGCTGG i otoGar3.GL873829 I 9 I 1 s mm10.chr16 65399783 19 - 98207768 ----TGCTCTCTGCACTTCAGAC--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29034127 19 + 31377067 ---------CTCAC----CGGACACCTACTGG i canFam3.chr33 I 9 I 1 s dasNov3.JH569502 3859448 11 + 6579706 -------------------AGTCACCTG--GG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387335 29 + 22200726 I e micMur3.chr1 25866475 86 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=262239.000000 s hg38.chr3_KI270779v1_alt 75972 47 + 205312 -CCCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAGGG- s panTro5.chr3 200061273 47 + 202621043 -CCCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42356 47 + 190779 -CCCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCAGAGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4347 47 + 106623 -CCCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAGGG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816392 47 + 123690457 -CCCTGTTTGCACAACAGACTGGCTCAGCCACACCCAGGCCCACAGGG- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867972 46 - 74750902 -CCCTGTTTCCACAACAGACTGGCTCA-CCACACCCAGGCCCATGGGG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407436 47 + 17725628 -CCCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAGGG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366762 47 - 6778120 -CCCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAGGG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23543 47 - 69927 -CCGCGTTTCCACAACAGACTGGCTCAGCCCCACCCAGGCCCACAGGG- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7387364 47 + 22200726 -CCCTGTTTCCACTACAGATTGGGTCAGCCACACCCAGCCCCACATCC- i proCoq1.NW_012133858v1 I 29 I 1 s otoGar3.GL873829 377719 47 - 608964 -CTCTGTTTCCACCACAGACTGGGCCAGCTCTACCTAGCCCCATATCC- i otoGar3.GL873829 I 1 I 1 s mm10.chr16 65399802 47 - 98207768 -TCCTGTTTTCACAACACTTTGGCTTGGCCACACCCAGCCTTGCTTCC- i mm10.chr16 C 0 I 1 s canFam3.chr33 29034147 47 + 31377067 -GCCTGTTTCCATAACAGGCCAGGCTGACCACACCTAGCCCCACATCC- i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3859459 49 + 6579706 CCCTTGTTTACACAACAGGCTGGGCGGGCTACACCTGATTCCACAGCCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25866475 86 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=510365.000000 s hg38.chr3_KI270779v1_alt 76019 78 + 205312 CTCAGAGGCCTGCTCCCTGTTGATCGTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTT s panTro5.chr3 200061320 78 + 202621043 CTCAGAGGCCTGCTCCCTGTTGATCGTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42403 78 + 190779 CTCAGAGGCCTGCTCCCTGTTGATTGTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4394 78 + 106623 CTCAGAGGCCTGCTCCCTGTAGATCTTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCTAGTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816439 78 + 123690457 CTCAGAGGCCTGCTCCCTGTTGATCTTGGCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868018 67 - 74750902 ATTAGAGGCCTGCTCCCTGTTGATCTTGTCAACTTTGAAAGGCCTTCGAGTTTATCTCTAAACAAAG----------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407483 78 + 17725628 ATTAGAGGCCTGTTCCCTGTTGATCTTGTCAACTTTGAAAGGCCTTCGAGTTTATCTCTAAACAAAGCCCTCCAGTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366809 78 - 6778120 ATTAGAGGCCTGTTCCCTGTTGATCTTGTCAACTTTGAAAGGCCTTCGAGTTTATCTCTAAACAAAGCCCTCCAGTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23590 63 - 69927 ATTAGAGGCCTGCTGCCTG---------------TCGAAAGGCCTTCGAGTTTATCTCTAAACAAAGCCCCCCAGCGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25866561 78 - 114275543 CTCAAAGGCCTGTTCCTTGTTGATCTTGTCAACTTGGGAAGGCCCTCAAGTTTATCCCTAAACAAAGCTCTCAAGTTT i micMur3.chr1 I 86 I 2151 s proCoq1.NW_012133858v1 7387412 77 + 22200726 ATCAAAGGTCTGCTCCCTGTTGATCTTATCAACTTGGGAAGGCCTTCAAGTTTATCCCTAAAC-AAGCCCTCAAATTT i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 377767 78 - 608964 CTCAGAGGCCTGCTCCCTGTTGATCGTGTCAACTTTGGAAGGCCCTCAAGTTTATCCCTAAACAAAGACCTCACGTTT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65399850 70 - 98207768 TTCAAAGGCCAGCTTC-TGTTGACCCTGTCAACTCTGAAAGTCC-TCAAGTTTATCCTTAAACAAGGCCCCT------ i mm10.chr16 I 1 C 0 s canFam3.chr33 29034195 71 + 31377067 CTCAGGAGCCTGCTCCTTGTTGATCTTGTCAACTTTGGAAGGCCCTCAAGTTTATCCATAAACAAAGCCCC------- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3859508 68 + 6579706 CTCAAAGGCCTGCTTCTTGTTGATCTTGTCAACTTTGGAGGGCCTTCAAGT---CCTCTAAACAAAGCCCC------- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=575238.000000 s hg38.chr3_KI270779v1_alt 76097 140 + 205312 AGCCCTAAAG----AGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACGGAGAAGAGTGTTGAGAGTCCT-GGG-GTGACAACACCTGGGT-CCCCTGCTCACCTGAGCCACAGACTCGCCAGGTAAC- s panTro5.chr3 200061398 140 + 202621043 AGCCCTAAAG----AGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACGGAGAAGAGTGTTGAGAGTCCT-GGG-GTGACAACACCTGGGT-CCCCTTCTCATCTGAGCCACCGACTCGCCAGGTAGC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42481 140 + 190779 AGCCCTAAAG----AGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACGGAGAAGAGTGTTGAGAGTCCT-GGG-GTGACAACACCTGGGT-CCCCTTCTCACCTGAGCCACCGACTCGCCAGGTAGC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4472 141 + 106623 AGCCCTAAAG----AGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACGGAGAACAGTGTTGAGAGTCCT-GGG-GTGACAACACCTGGGTCCCCCTTCTCACCTGAGCCACAGACTCGCCAGGTAAC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816517 140 + 123690457 AGCCCTAAAG----AGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACAGAGAACAGTGTTGAGAGTCCT-GGG-GTGACAACACCTGGGT-CCTCTTATCATCTGAGCCACAGACTCGCCAGGTAAC- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868085 135 - 74750902 --CCCTAAAC----AGTCAGGTGTTAACCTAATAGGAAGCAATGTGGAAGGTCAAGGTAAAGCAGTT---GAACAGCATTGAGAGTCCT-GCG-GTGAGAACACCTGGGT-CCGCTTCTCACCGAAGCCATAGACTTGCCAAGTAAT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407561 137 + 17725628 ACCCCTAAAC----AGTCAGGTGTTAACCTAATAGGAAGCAATTTGGAAGGTCAAGGTAAAGTAGTT---GAACAGCATTTAGAGTCCT-GGG-GTTAGAACCGCTGGGT-CCTCTTCTCACCAGAGCCATAGACCTGCCAGGTAAC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 366887 140 - 6778120 AGCCCTAAAC----AGTCAGGTGTTAACCTAATAGGAAGCAATTTGGAAGGTCAAGGTAAAGTAATTGGAGAACAGCATTGAGGGTACT-GGG-GTGAGAACCGCTGGGA-CCTCTTCTCACCGGAGGCATAGACCTGCCAGGTAAC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 23653 140 - 69927 AGCCCTGAGC----AGTCAGGTGTTAACCTAATAGGAAGCAATTTGGAAGGTCAAGATAAAGAGGTCGGAGAACAGCATGGAGAGTCCC-AGG-GTGAGAACAGCCGGGT-CCTCTTCTCACCGGAGCCACAGACTTGCCGGGTAAC- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7387489 144 + 22200726 ACCCCTAAACAAATAGGCAGGTGCTAACCTAACCAGGGGCAATT-GGAAGGTCAAGGTAGAGTAGAGGGAGATCAGCGCTGAGAATCCTGGGG-GTGAGAACACATGGAG-CCCATTCTTACCTGAGCCACAGACTCACCAGGTAAC- i proCoq1.NW_012133858v1 C 0 I 2330 s otoGar3.GL873829 377845 130 - 608964 ACCCTTAAACAAACAGGCAGGTGCTAACCTAACCAGTTGCAATT----AGGTCAAG-----GTAGAGGGAGACCAGTGCTGAG--TCCT-GGG-GTGAGAAC---TGAGT-CCTACTGTTACCTGAGCCGCAGACTCACTGAGTAAC- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65399920 105 - 98207768 ---------------GGCAGGTGCTAAGCTAACAGGAATCAATT---------------GAAAAGAAAGCAAGCAGCATTAAAA---TT-AAA-ATTAAGCTATCTGGGC-CCAGTCC---CATGAACCA--GACTCTCCAGG-AAC- i mm10.chr16 C 0 I 1 s canFam3.chr33 29034266 125 + 31377067 ----------------GCAGGTGCTAAGCTGACAGGAGGTGACTGGGTAGGTCAAGGTAAagcagagaaagaacagcactgagagtcct-gggtgtgagatcccctgggg-ctcattcccccctgagccactgactcaccacc----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859576 128 + 6579706 --------------AGGCAGGTGCTAACTTAAAGGGAGGCAACTGGGAAGGTCAAGGTAACATAGAGGGCGAACAGCATTGAGT-TCCA-GGG-GTGAGAACA-CGGGGA-CTCATTCCCA-CTGAGCTACAGACTCACCAGCTACCC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25866639 2151 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=134514.000000 s hg38.chr3_KI270779v1_alt 76237 36 + 205312 TGGGCCAGCGTCCCT-CCTGCCCA-CGCCTTGCTTGCC s panTro5.chr3 200061538 36 + 202621043 TGGGCCAGCGTCCCT-CCTGCCCA-CGCCTTGCTTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42621 36 + 190779 TGGGCCAGCGTCCCT-CCTGCCCA-CGCCTTGCTTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4613 36 + 106623 TGGGCCAGCGTCCCT-CCTGCCCA-TGCCTTGCTTGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816657 36 + 123690457 TGGGCCAACATCCCT-CCTGCCCA-CGCCTTGCTTGCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868220 35 - 74750902 -GGGCCGTAGTCCCT-CCTGCCAA-TACCTTCTTTGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 407698 36 + 17725628 GGGGCCATAGTCCCT-CCTGCCAA-AACCTTGTTTGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 367027 36 - 6778120 GGGGCCATAGTCCCT-CCTGCCAA-CACCTTGCTTGCC i cebCap1.NW_016107444v1 C 0 I 307 s aotNan1.NW_018503669v1 23793 36 - 69927 TGGGCCACAGTCCCT-CCTGCCAA-CACCCTGTTTGCC i aotNan1.NW_018503669v1 C 0 I 7711 s otoGar3.GL873829 377975 36 - 608964 -AGGTGGTAGTCGCTATCTGCCAC-TGCCTTGCTTTCC i otoGar3.GL873829 C 0 I 110 s mm10.chr16 65400026 35 - 98207768 --TACCTCACCCCCG-CCTGCCCAGTTTCATTTTTTCC i mm10.chr16 I 1 C 0 s canFam3.chr33 29034391 36 + 31377067 tgggccacatcccta-cctgccaa-tgccttgctttcc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859704 38 + 6579706 TGAGCCATGGTCCCTACCTGCCCAACGCCTTGCTGTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=4851.000000 s hg38.chr3_KI270779v1_alt 76273 2 + 205312 GC s panTro5.chr3 200061574 2 + 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42657 2 + 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4649 2 + 106623 CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816693 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868255 2 - 74750902 CC i calJac3.chr17 C 0 I 308 s saiBol1.JH378146 407734 2 + 17725628 CC i saiBol1.JH378146 C 0 I 302 s mm10.chr16 65400061 1 - 98207768 -T i mm10.chr16 C 0 I 1 s canFam3.chr33 29034427 2 + 31377067 cc i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3859742 2 + 6579706 CC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 378011 110 - 608964 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367063 307 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=8326.000000 s hg38.chr3_KI270779v1_alt 76275 2 + 205312 AC s panTro5.chr3 200061576 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42659 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4651 2 + 106623 AC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816695 2 + 123690457 AC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868565 2 - 74750902 AC i calJac3.chr17 I 308 C 0 s saiBol1.JH378146 408038 2 + 17725628 AC i saiBol1.JH378146 I 302 C 0 s cebCap1.NW_016107444v1 367370 2 - 6778120 AC i cebCap1.NW_016107444v1 I 307 C 0 s otoGar3.GL873829 378121 2 - 608964 ac i otoGar3.GL873829 I 110 I 165 s mm10.chr16 65400063 2 - 98207768 TC i mm10.chr16 I 1 C 0 s canFam3.chr33 29034430 2 + 31377067 tc i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3859744 2 + 6579706 AC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=349692.000000 s hg38.chr3_KI270779v1_alt 76277 108 + 205312 -TCTT-------------AAAGAAGATGCATCCCCTTCTCT-TGGAG-GGAATGACAATGACCAGATCACAACTGAGCTGAGC-AATTTGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT s panTro5.chr3 200061578 108 + 202621043 -TCTT-------------AAAGAAGATGCATCCCCTTATCT-TGGAG-GGAATGACAATGACCAGATCACAACTGAGCTGAGC-AATTTGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42661 108 + 190779 -TCTT-------------AAAGAAGATGCATCCCCTTATCT-TGGAG-GGAATGACAATGACCAGATCACAACTGAGCTGAGC-AATTTGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4653 109 + 106623 -TCTT-------------AAGGAAGATGCATCCCCTTATAT-TGGAG-GGAATGACAATGACCAGATCACAACTGAGCTGAGCAAATTGGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816697 108 + 123690457 -TCTT-------------AAAGAAGATGCATCCCCTTATCT-TGGAG-GGAATGACAATGACCAGATCACAACTGAGCTGAGC-AATCTGGGGAAATTTGGGCAGGGG--GTAGAGTCGGCAGAACT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868567 105 - 74750902 -TCTT-------------AACGAAGATGCACCCCCTTACCT-TGGAG-GGAATGACCAAGACCAGATCACAGCTGAGCTAAGC-ACTTTGGGGAAAT---GGCCGGGG--GTGGAGCTGGCAGAACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 408040 105 + 17725628 -TCTT-------------AAAAAAGATGCACCCCCTTATCT-TGGTG-GGAATGAACAAGACCAGATCACCACTAAGCTAAGT-GATTTGGGGAAAT---GGCCGAGG--GTAGAGCCGGCAGAACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 367372 105 - 6778120 -TCTT-------------AAAGAAGATGCACCCCCTTATCT-TGGTG-GGAATGACCAAGACCAGATCACAACTGAGCTAAGT-GATTTGGGGAAAT---GGCTGGGG--GTAGAGCTGGCAGAACT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 378288 118 - 608964 -tcttaaaaaaaaaaaaaaaagaaGATATATCCCCTCATCT-TGTAGTGGACAGGCAATGTACAGATTACAACTGAGTTGAGC-AACTTGGGGAAAT---GGTAGAGG--GTGGGGTTGGTA-ATCT i otoGar3.GL873829 I 165 C 0 s mm10.chr16 65400065 101 - 98207768 -TCTT-------------AAAAGAGGTGCACCTGCTTATTTGTGGTT--------TAATAAACAGATAACCACTGAGTTGAGC-AACTTAGGGAAAT---GGTTAGGGAAGCAGAGCTGACGAAACT i mm10.chr16 C 0 I 720 s canFam3.chr33 29034432 106 + 31377067 -cctt-------------aaagaagATAACCCCCCTCACTC-TGTAGTGGGTAGGCAATAGCCCAGATATGATCGAAGTGAGC-AACTTGGGAAAAT---GGTTAGAA--TTAGGGTTGATGAAACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859746 105 + 6579706 CTGTA-------------AAGGAAGATGAGTCCCCTGATCC-CGAGT-GGACAGGCAATGATCATATAATAGTTCAGTTGAGT-AACTTGGGG-AAT---GGGGGCAG--TTGGGGCTGGTGAGGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=111436.000000 s hg38.chr3_KI270779v1_alt 76385 34 + 205312 GGTTTGTAAACAGGGCTCTGGAAGACCTTCCTCT s panTro5.chr3 200061686 34 + 202621043 GGTTTGTAAATAGGGCTCCGGAAGACCTTCCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42769 34 + 190779 GGTTTGTAAATAGGGCTCCGGAAGACCTTCCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4762 34 + 106623 GGTTTGTAAATAGGGCTCCGGAAGACCTTCCTCT i gorGor5.CYUI01000576v1 C 0 I 1 s nomLeu3.chr11 120816805 34 + 123690457 GGTTTGTAAATAGGGCTCCGGAAGACCTTCCTCT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868672 34 - 74750902 ATTTTGTAAGCTGGGCTCCTGGAGACCTTCCTCT i calJac3.chr17 C 0 I 9054 s saiBol1.JH378146 408145 34 + 17725628 GGTGTGTAAATTGGGCTCCTGGAGACTTTCCTCT i saiBol1.JH378146 C 0 I 8124 s cebCap1.NW_016107444v1 367477 34 - 6778120 GGTTTGTAAATTGGGCTCCTGGAGACCTTCCTCT i cebCap1.NW_016107444v1 C 0 I 7796 s otoGar3.GL873829 378406 34 - 608964 GTTGTGTGACTGGGGATCATGGAGAGCTTCCTCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29034538 34 + 31377067 GCTTTGTGATTAGGGACCATGGCGACCTTCCTCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3859851 33 + 6579706 GTTTTGTGAA-GGAGACCATGGAGACCTCTCTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=162511.000000 s hg38.chr3_KI270779v1_alt 76419 137 + 205312 AACTGTGGGGAGTGGGGGAGGGGTTtctc--tccctctt--aggcactctc-ttctc-----tgc----tgttttctc-----tatttctctcttc---gctgtca------ctcccattaccgtcctcatcttatctcccc-cttttct-----------ctccttctctctctc----t s panTro5.chr3 200061720 137 + 202621043 GACTGTGGGGAGTGGGGGAGGGGTTtctc--tccctctt--aggcactctc-ttctc-----tgc----tgttttctc-----tatttctctcttc---actgtca------ctcccattaccgtcctcatcttatctcccc-cttttct-----------ctccttctctctctc----t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42803 137 + 190779 GACTGTGGGGAGTGGGGGAGGGGTTtctc--tccctctt--aggcactctc-ttctc-----tgc----tgttttctc-----tatttctctcttc---actgtca------ctcccattactgtcctcatcttatctcccc-cttttct-----------ctccttctctctctc----t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4797 140 + 106623 AACTGTGGGGATGTGGGGAGGGGTTtctc--tccctctt--aggcactctctttctc-----tgct---tgttttctc-----tatttctctcttt---gctgtca------ctcccattaccgtcctcatcttatctccctgcttttct-----------ctccttctctctctc----t i gorGor5.CYUI01000576v1 I 1 C 0 s nomLeu3.chr11 120816839 149 + 123690457 AACTGTGGGGAGTGGGGGAGGGGTTTCTC--TCCCTCTT--AGGCACTCTC-TTCTC-----TGC----TGTTTTCTCGATTGTCTTTCTCTCTTCTTTGCTGTCA------CTCCCGTTACCCTCCTCATCTTATCTCCCC-CTTTTCT-----------CTCCTCCTCTCTCTCCCTGT i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 378440 144 - 608964 AACTTTCTG----------GGGTTTTCTC--TCCCT-TA--CCACACTCTC-TTCTC-----TGTCCCATGTTGTCCCTGGTGCCTCTCTCTCTTCTTTGCTGTTATTTATTTTCCTATTGCCCTCCTCTTCTTGTCACTCT-CTTTTCt-----------tttcttttttttttt----t i otoGar3.GL873829 C 0 I 141 s canFam3.chr33 29034572 134 + 31377067 AACTCTGTGG---------GGTTTTTCTCTGTCCCTCTT---GTCACACTT-CTGTC-----TGT----TGTTTACTTTATTGCTTCTCTTTCTTCCTTCCCGCCA------CATCC-CTGCCAGCCTCCTCTTGTCTCT---CTTCTCT-----------CTCCTTCCTTCTTTC----T i canFam3.chr33 C 0 I 26 s dasNov3.JH569502 3859884 155 + 6579706 AACTTTCTGG---------GGGTtttctctgtccctttttatcacactctc-ttctcttgagtgc----tggtttctctcttacctccctcccttccttacagtca------ctcct-cggactccctcctttttggtctcc-cttttctgtctgtctctcttccatctctgtctc----t i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=98059.000000 s hg38.chr3_KI270779v1_alt 76556 86 + 205312 ----------ctGTTT-aataacagctttattgagagataatttacagga-tgtgagatttacccttttgtacaattcaccatgtgtacatttcagtg s panTro5.chr3 200061857 86 + 202621043 ----------cttttt-aataacagctttattgagagataatttacagga-tgtgagatttacccttttgtacaattcaccgtgtgtacatttcagtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 42940 86 + 190779 ----------cttttt-aataacagctttattgagagataatttacagga-tgtgagatttacccttttgtacaattcaccgtgtgtacatttcagtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 4937 86 + 106623 ----------cttttt-aatagcagctttattgagagataatttacatgattgtgaaaatttaccctttgtacaattcaccatg-gtacatttcagtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120816988 86 + 123690457 ----------Cttttt-aataacagctttattgagagataatttacatga-tgtgaaatttacccttttgtacaattcaccatgtatacatttcagtg i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29034732 75 + 31377067 ----------CTCTTT-aataacagctttcctgagatataatgcctctaa-catcaaattcatccttttaaa-----------gggtacacttcagtg i canFam3.chr33 I 26 C 0 s dasNov3.JH569502 3860039 86 + 6579706 ctgtctctccctctttaaataacagctttattgagaaataatccacccac-catcaaatccacccttttaaa-----------gtgtataattcaatg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 378584 141 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=46505.000000 s hg38.chr3_KI270779v1_alt 76642 51 + 205312 ttgttcagtgtattcacagggttgcagaaccatcactgctgtcttatttta s panTro5.chr3 200061943 51 + 202621043 ttgtttagtgtattcacagggttgcagaaccatcactgctgtcttatttta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43026 51 + 190779 ttgtttagtgtattcacagggttgcagaaccatcactgctgtcttatttta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5023 49 + 106623 t--tttagtgtattcacagggttgcagaaccatcaccgctgtcttacttta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817074 51 + 123690457 ttttttagtgtattcacagggttgcaaaaccatcactgctgtcttctttta i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 378725 37 - 608964 CTGCTCACTG-AATCACAGGCTT-------------CTTTCTCTTAGCTTG i otoGar3.GL873829 I 141 C 0 s canFam3.chr33 29034807 33 + 31377067 gtttttaatgtgttcacagagtcgtgcaaaaaa------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3860125 50 + 6579706 ctttttagtaaattca-aaagttgtactaccatgaccattatctaatgtta i dasNov3.JH569502 C 0 I 54 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=27023.000000 s hg38.chr3_KI270779v1_alt 76693 26 + 205312 TTTTTTTGG----CACtttttggtagagac s panTro5.chr3 200061994 26 + 202621043 TTTttttgg----tactttttggtagagac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43077 26 + 190779 TTTttttgg----tactttttggtagagac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5072 26 + 106623 TTTttttgg----tactttttggtagagac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817125 26 + 123690457 TTTttttgg----tactttttggtagagac i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 378762 30 - 608964 ACTTTCTGGCTCTCTCtttttaataaaaac i otoGar3.GL873829 C 0 I 91 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29034840 0 + 31377067 C e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=1365.000000 s hg38.chr3_KI270779v1_alt 76719 1 + 205312 a s panTro5.chr3 200062020 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43103 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5098 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817151 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29034840 1 + 31377067 a i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 378792 91 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=91301.000000 s hg38.chr3_KI270779v1_alt 76720 107 + 205312 gggttttgccacgttggccaggctagtctcaaactcctgacctcaaatgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctg s panTro5.chr3 200062021 107 + 202621043 gggttttgccacgttggccaggctagtctcaaactcctgacctcaaatcatctgcctgcctcggcctcccaaagtgctgggattacagctgtgagccactgcacctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43104 107 + 190779 gggttttgccacgttggccaggctagtctcaaactcctgacctcaaatcatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccactgcacctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5099 106 + 106623 gggttttgccacgttggccaggctagtctcaaactcctgacctcaaatcatccgtccgcctcgg-ctctcaaagtgctgggattacaggtgtgacccactgcacctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817152 107 + 123690457 gggtttcgccacattggccaggctagtctcaaactcctgaccccaaatgatctgcccacctcggcctcccaaagtgctgagattacaggtgtgagccactgtgcctg i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 378792 91 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29034841 0 + 31377067 C e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=2345.000000 s hg38.chr3_KI270779v1_alt 76827 2 + 205312 gc s panTro5.chr3 200062128 2 + 202621043 gc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43211 2 + 190779 gc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5205 2 + 106623 gc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817259 2 + 123690457 gc i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 378883 2 - 608964 gt i otoGar3.GL873829 I 91 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29034841 0 + 31377067 C e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=387701.000000 s hg38.chr3_KI270779v1_alt 76829 271 + 205312 cacctctgtctaatttcagaacatgtttgttatgccccaaataaactctg-acccatcagcagtcactgcctggtccacacatctcaccag-cccctggcaaccactaatatactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcata-caatacacggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaa s panTro5.chr3 200062130 272 + 202621043 cacctctgtctaatttcagaacatgtttgttatgccccaaataaactctgtacccatcagcagtcactgcctagtccgcacatctcaccag-cccctggcaaccactaatgtactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcata-caatacacggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43213 272 + 190779 cacctctgtctaatttcagaacatgtttgttatgccccaaataaactctgtacccatcagcagtcactgcctagtccgcacatctcaccag-cccctggcaaccactaatgcactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcata-aaatacatggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5207 273 + 106623 cacctctgtctaatttcagaacatgtttgttatgccccaaataaactctgtacccatcagcagtcactgcctagtccgcacatctcaccag-cccctggcaaacactaatgtactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcataccaatacatggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817261 270 + 123690457 cAC--ctgtctaatttcagaacatgtttgttacaccccaaataaactctgtacccatcagcagtcactgcctagtccccacatctcaccag-cccctggcaaccgctaatgtactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcata-taatacacggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaa i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 378885 266 - 608964 caccactatctaattgcagaatgagttcgttgcccccaaaggaaactctgtactcatcagcagtcactccctcttccccaca-cccaccagccccctggtgg--gctaatctactttccatccctatggattttcctattctaaacatttcat----atggaatcata-taatatgtggccttctgtgactggcttctttcacttaccacgt--tcataagcttcatctgtgttgtagcatgcatctgtattttgttcctttttatgggtgaataa i otoGar3.GL873829 C 0 I 668 s canFam3.chr33 29034841 273 + 31377067 caccattgtctaatttcagaacatttcttcactccccaaaagtggccctgtaccctttagcagtcactccctgttccccataccac-ctgg-cccctggcaaacattaatctacttcccgtctctatgggcttccccgtggtggacatttcgcataaatggaatccta-caatatgtgggcatttgtcactgactgctttcacttagcatttcgtttctaggttcatccacgttgtcgtgtgtctcaggactccatttcttattatggctgaatag i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=35288.000000 s hg38.chr3_KI270779v1_alt 77100 32 + 205312 tatcccattatatggatataccagatttagtt s panTro5.chr3 200062402 32 + 202621043 tattccattatatggatataccagatttagtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43485 32 + 190779 tattccattatatggatataccagatttagtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5480 32 + 106623 tattccattatatggatataccagatttagtt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817531 32 + 123690457 tattccattatacggatataccagatttagtt i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29035114 32 + 31377067 tatcccactgtgtaggggtaccatagtttgtt i canFam3.chr33 C 0 I 194 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 379151 668 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=331236.000000 s hg38.chr3_KI270779v1_alt 77132 338 + 205312 ttagccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacactgctatgaatattcattgataggtttttgt-gtgaacatgtgtttttaattctc--ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctatgttt-acattctgag-aaactgtcaaattgtttttctttttt---ttcttttttttttttattcttttctgctgccac-ctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagcagtgtatgagggttccaatttctccacaccctcagcaacactt s panTro5.chr3 200062434 340 + 202621043 ttagccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacactgctatgaatattcattgataggtttttgt-gtgaacatgtgtttttaattctc--ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctatgttt-acattctgag-aaactgtcaaattgtttttctttttttc-ttttttcttttttttattattttctgctgccac-ctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagcagtgtatgagggttccagtttctccacaccctcagcaacactt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43517 336 + 190779 ttagccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacactgctatgaatattcattgataggtttttgt-gtgaacatgtgtttttaattctc--ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctatgttt-acattctgag-aaactgtcaaattgtttttctttt-----tttctttttttttttattattttctgctgccac-ctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagcagtgtatgagggttccagtttctccacaccctcagcaacactt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5512 341 + 106623 ttagccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacattgctatgaata-tcattgataggtttttgtggtgaacatgtgtttttaattctc--ctaact--------acaggctcagaagtagg--ttctgggtcatatgg-caactctatgttt-acattctgagaaaactgtcaaattgttttcttttttttctttttttcttttttttattattttctgctgccacactcatctccccaaattgattttcaaagtggctgcaccattttgcaattccacctgcagtgtatgagggtcccaatttctccacaccctcagcaacactt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817563 328 + 123690457 ttatccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataactctgctatgaatattcattgataggttttcat-gtgaacatgtgtttttaatt-----ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctgtgtttaacattctgag-aaactgtcaaattgtttt-----------tctttttttttttttattcttttctgctgccac-ctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagtagtgtatgagggttccaatttctccacatcctcagcaacactt i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29035340 293 + 31377067 ttatccattcatcagctgacaaacatttgatttgtttccactttggggtacttatgaataatgctcctttgaacatttatgtacaggtttttat-ggggac-tgtattttcatttctcttctgggtttattttcatatactcagaaatgggcttgctgcatcatatggttttcactctgttaaacattctgag-gatctgccaaactgtttt-----------ttt-------------------------------c--------------tgttttccagagtggctgcgccatgcttcaattcca---gcaatgtgtg-gggttccgatttctccacattctcaccaacactt i canFam3.chr33 I 194 I 862 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 379151 668 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=193759.000000 s hg38.chr3_KI270779v1_alt 77470 226 + 205312 caac-acttgctttttttttttttttttttgagatggggtctcgctctgtcgccaggctggagtgcagtggcgtgatctcagctcactgcgacctctgcctcctgggttcaagagattctcgtgcctcagcctcctgagtagctgggactacaggtgcatgccaccacacccagctaatttttg-tatttttagtagagac-gggtttcactatgctggccaggatggt s panTro5.chr3 200062774 225 + 202621043 caac-acttgc--tttttttttttttttttgagatggggtctcgctctgtcgctaggctggagtgcagtggcgtgatctcagctcactgcgacctctgcctcctgggttcaagagattctcgtgcctcagcctcctgagtagctgggactacaggtgcatgccaccacacccagctaatttttg-tatttttagtagagacggggtttcactatgctggccaggatggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 43853 228 + 190779 caactactttttttttttttttttttttttgagatggggtctcgctctgtcgctaggctggagtgcagtggcgtgatctcagctcactgcgacctctgcctcctgggttcaagagattctcgtgcctcagcctcctgagtagctgggactacaggtgcatgccaccacacccagctaatttttg-tatttttagtagagacggggtttcactatgctggccaggatggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 5853 227 + 106623 caac-acttgctttttttttttttttttttgagatggggtctcgctctgtcgccaggctggagtgcagtggcatgatctcagctcactgtgacctctgcctcctgggttcaagagattctcgtgcctcagcctcctgagtagctgggactgcaggtgcatgccaccacacccagctaatttttgctatttttagtagaggc-gggtttcactatgctggccaggatggt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120817891 219 + 123690457 caac-acttgc--------tttttttttttgagatggggtctcgcactgttgccaggctggagtgcagtggcgtgatctcagctcactgcgacctctgccttctgggttcaggagattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgctgccacacctagctaatttttg-tatttttagtagagacggggtttcactgtgctggccaggatggt i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 379151 668 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=88583.000000 s hg38.chr3_KI270779v1_alt 77696 108 + 205312 ctcaaactcctgaactcgtcatccacccatctcagtgttcccaagtgccgtgattacaggtgtgagccaccccacccagccaacacttgctgttt----tattttttatctt s panTro5.chr3 200062999 108 + 202621043 ctcaaactcctgaactcatgatccacccgtctcggtgttccaaagtactgtgactacaggtgtgagccactgcacccagccaacacttgctattt----tattttttatctt i panTro5.chr3 C 0 I 224 s panPan2.chrUn_NW_014024201v1 44081 108 + 190779 ctcaaactcctgaactcatgatccacccgtctcggtgttccaaagtactgtgactacaggtgtgagccactgcacccagccaacacttgctattt----tattttttatctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6080 107 + 106623 ctcaaactcctgaactcatgatccacctgtctcggtgttccaaagtactgtgactacaggtgtgagccactgca-ccagccaacacttgctattt----tattttttatctt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120818110 108 + 123690457 ctcaaactcctgaacttgtgatccacccgtctcagtgttccaaagtgctgtgattacaggtgtgagccaccgcacccagccaacacttgctattt----tattttttatctt i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 379819 55 - 608964 ttccaatttctgaac-------------------atgctcata--------------------------------------aacgctggttattttctgtctttttaatttt i otoGar3.GL873829 I 668 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=171247.000000 s hg38.chr3_KI270779v1_alt 77804 149 + 205312 agccgtcctactggatgtggggtggtatctcattgtggtttggatttgcatttcctt-atgattaatgatgttgagtatcttt---catgctcactggccacttgtgtatcttctttggagaaatgtctatttaaatcctttgtccagtttta s panTro5.chr3 200063331 149 + 202621043 agccgtcctaatggatgtggggtggtatctcattgtggtttggatttgcatttcctt-atgattaatgatgttgagtatcttt---catgctcactggccacttgtgtatcttctttggagaaatgtctatttaaatcctttgtccagtttta i panTro5.chr3 I 224 C 0 s panPan2.chrUn_NW_014024201v1 44189 149 + 190779 agccatcctaatggatgtggggtggtatctcattgtggtttggatttgcatttcctt-atgattaatgatgttgagtatcttt---catgctcactggccacttgtgtatcttctttggagaaatgtctatttaaatcctttgtccagtttta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6187 144 + 106623 agccgtcctaa-ggatgtggggt-gtatctcattgtgg-ttggatttgcatttcctt-atgattaatgatgttgagtatcttt---catgctcactggccac-tgtgtatcttc-ttggagaaatgtctatttaaatcctttgtccagtttta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120818218 149 + 123690457 agccatcctaatggatgtggggtggtatctcattgtggtttggatttgcatttcctt-attattaatgatgttgaatatcttt---catgctcactggccacttgtatatcttctttggagaaatgtctatttaaatcctttgtccagtttta i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 379874 153 - 608964 agccatcctaatgggtgtgaagtggtatctcattgtggttttaatttgcattttcttgatgatgaataatgttgggcatcttttcatatgcttgtggactatttgtatatcttctttggagaaatgtctatttgaagcctttgcacatttttA i otoGar3.GL873829 C 0 I 2823 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=7121.000000 s hg38.chr3_KI270779v1_alt 77953 13 + 205312 aatttgattgACt s panTro5.chr3 200063480 13 + 202621043 aatttgatGGACt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 44338 13 + 190779 aattTGATGGACt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6331 11 + 106623 aa-ttgAT-GACt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120818367 13 + 123690457 aatttgattgACt i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 380027 2823 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 868706 9054 - 74750902 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=24731.000000 s hg38.chr3_KI270779v1_alt 77966 30 + 205312 tatttttatttatttatttattttggaggc s panTro5.chr3 200063493 30 + 202621043 tatttttatttacttattttttttggaggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 44351 29 + 190779 tatttttatttacttattt-ttttggaggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6342 28 + 106623 ta-ttttatttacttattt-ttttggaggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120818380 30 + 123690457 tatttttatttatttatttattttggaggc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 877760 30 - 74750902 taccCCTGtttatttttatttttttgaaat i calJac3.chr17 I 9054 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 380027 2823 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e aotNan1.NW_018503669v1 23829 7711 - 69927 I e cebCap1.NW_016107444v1 367511 7796 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=304396.000000 s hg38.chr3_KI270779v1_alt 77996 136 + 205312 agagtcttgctctgttg-cccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactataggtgcatgctaccaagc s panTro5.chr3 200063523 136 + 202621043 agagtcttgctctgttg-cccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagcctcctgagtagctgggactataggtgcatgctaccaagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 44380 136 + 190779 agagtcttgctctgttg-cccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagcctcctgagtagctgggactataggtgcatgctaccaagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6370 135 + 106623 agagtcttgctctgttgccccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcct-ggttcaagcaattctcctgcctcagcctcctgagtagctgagactataggtgcatgcta-caagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120818410 136 + 123690457 agattcttgctctgctg-cccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcctgagtatctgggactataggtgcatgctaccatgc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 877790 135 - 74750902 agagtcttgctctgttg-tccaggctggagtgcagttgtgcaatcttggctcacagcaaccttcacctcctgggttcaagcaattctcctgccttagcctcccaagtagctgggactgtt-gtgctcaccaccacgc i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 375307 135 - 6778120 agagtcttgctctgttg-tccaggctggagtacagttgtgcaatcttggctcactgcaacctccccctcctggattcaagcaattctcctgccttagcctctcaagtagctgggactatc-atgcccaccaccacac i cebCap1.NW_016107444v1 I 7796 C 0 s aotNan1.NW_018503669v1 31540 135 - 69927 agagtcttgttctgttg-tccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctcccgccttagcctcccaagtagctgggactatc-atgcccaccaccacac i aotNan1.NW_018503669v1 I 7711 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 380027 2823 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e saiBol1.JH378146 408179 8124 + 17725628 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=1166696.000000 s hg38.chr3_KI270779v1_alt 78132 459 + 205312 ccagcta---------atttttgtgtttttagtagagac--gggtttcaccatgttggccaggctg-------gtgttgaactcctggcctcaagtgatctgcctgccttggtctcccaaagtgctgggattacaggcatgagccaccgcacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtttgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtctaagcaccatttgttaaaTCTATCttttct---------------------tttcctttttttttt---------------------------------t----------------ttttttttttttttgagacagggtcttgctctgtcacccaggctgaagtgcgctggtgtgatcatggctcacttcagctt-cctgcgtctgggctcaagtgat-ctcctgtctcagcctcctgggtagctgggactac-------------aggcgtgcaccacca-tacctggctaattt s panTro5.chr3 200063659 469 + 202621043 ccagcta---------atttttgtatttttagtcgagacaggggtttcaccatgttggccaggctg-------gtcttgaactcctggcctcaagcgatctgccttccttggtctcccaaagtgttgggattacaggcatgagccaccacacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtgtgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtccaagcaccatttgttaaatctatcttttct---------------------tttctttttctttttcttttctt-------------------------t----------------tttttttttattttgagacagggtcttgctctgtcacccaggctgaactgcactggtgtgatcatggctcacttcagttt-cctgcttctgggctcaagtgat-ctcctatctcagcctccggggtagccgggactac-------------aggcatgcaccacca-tacctggctaattt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 44516 467 + 190779 ccagcta---------atttttgtatttttagtcgagacaggggtttcaccatgttggccaggctg-------gtcttgaactcctggcctcaagcgatctgccttccttggtctcccaaagtgctgggattacaggcatgagccaccacacccagccagtttcagctcttacatttaggtctgtggtccattttgagttaatatttgtatatggtgtgaggtaggagtccaaatgcattc-tttgcatgtgcttatccagttgtccaagcaccatttgttaaaTCTAtcttttct---------------------tttctttttctttttcttttct--------------------------t----------------ttcttttttattttgagacagggtcttgctctgtcacccaggctgaactgcactggtgtgatcatggctcacttcagttt-cctgcttctgggctcaagtgat-ctcctatctcagcctctggggtagccgggactac-------------aggcatgcaccacca-tacctggctaattt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6505 460 + 106623 gcagcta---------tcttttgtatttttagtagagacaggggtttcaccatgttggccaggctg-------gtcttgaactcctggcctcaagcaatctgccttccttggtctcccaaagtgctgggattacaggcatgaaccaccacacccagccagtttcagctcttacatttaggtttatggtccattttgagttaatatttgtatatgg-gtgaggtaggagtccaaatgcatat-tttgcatgtgcttatccagttgtccaagcaccatttattaaaTCTATCtttctt---------------------tttcttttttctttttttt-----------------------------t----------------ttttttttttttttgagacagggtcttgctctgtcacccaggctgaagtgcactggtgtgatcat-gctcacttcagcttccctgcttct--gctcaagt-at-ctcctgtctcagcctccagggtagccgggactac-------------aggcatgcaccaccattacctggctaa-tt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120818546 458 + 123690457 ccagcta---------atttttgtatttttagtagggacaggggtttcaccatgtttgccaggctg-------gtcttgaactcctggcctcaagtgatctgcctgcctcagtctcccaaagtgctgggattacaggcatgagccaccacacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtgtgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtccaagcaccatttgttaaatctatcttttct---------------------tttctttttctttttctttt----------------------------c----------------ttttttttttttttgagacaggatcttgctctgtcatccaggctgaagtgcactggtatgaccatggctcacttcaactt-cctgtttctgggctcaagtgat-ctcctatctcagcctcctgggtagccaggactac-------------aggcacgcaccacca---------taattt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 877925 461 - 74750902 tcagcta---------atttttgtattattagtagagat-ggagttttaccatgttggccaggctg-------gtcttgaactcctggcctcaagtgatctgcctgtctttgtctctcaaagtgttaagattacaggtgtgagccaccatgactggccagtttcagctcttacatttaggtctttggtacattttgagttaatatttgtatacggtgtgaggtaggggtccaaatgcattctcttgcatgtgcttatccagttgtccaagcaccatttgttaaatctatcttttcT---------------------tttctttctttgtttc-------------------------------------------------tttttcttttttttgagacagggtcttgctctgtcacctaggctgaagtgcagtggtgtgatcatggctcatttcagctt-ccagcttctgggctcaagtgctcctcctacctcagccccctgggtagctgggactat-------------aggcatgtaccacca-cacctggctaattt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 416303 481 + 17725628 ccagctaccCCCCtttatttttattttttt------gaa-agagtcttgctctgttgtccagactggagtgcagttgtgcaatcttgg---------------------------ctcaaagtattaagattacaggtgtgagccaccatgcctggccagtttcagctgttacatttaggtctttggtacatttcaagttaatatttgtatatggtgtgaggcaggggtccaaatgcattctcttgcatgtgcttatccagctgaccaatcaccatttgttaaatctaccttttcttttctt---tgtttctttttctttctttctttgtttctttttttct-----------------------tttctttttttttttttttttttttttttttgagacagtgtcttgctctgtcacttaggctgaagtgcagtggtgcgatcatggctcagttcagctt-cca-------ggctcaagtgctcctcctacctcagccccctgggtagctgggactat-------------aggcatgcaccacca-cacctggctaattt i saiBol1.JH378146 I 8124 C 0 s cebCap1.NW_016107444v1 375442 502 - 6778120 tcagcta---------atttttgtattattagtagagat-ggagttttaccatgttggccaggctg-------gtcttgaactcctggcctcaagtgatctgcctgtctttgtctctcaaagtattaagattacaggtgtgagccaccatgcctggccagtttcagctgttacatttaggtctttggtacattttgagttaatatttgtatacagtgtgaggtaggggtccaaatgcattctcttgcatgtgcttatccagttgtccaagcactgtttgttaaatctaccttttct-----------------tttctttctttgtttgtttctttCCTTCt-----------------------ttccttttttttttt--ttttttttttttttgagacagggtcttgctctgtcacttaggttgaagtgcagtggtgtgatcatggctcagttcagctt-ccaacttctgggctcaaatgctcctcctacctcagccccctgggtatctgggactataggcatgcaccacaggcatgcaccacca-cacctggctaattt i cebCap1.NW_016107444v1 C 0 I 15 s aotNan1.NW_018503669v1 31675 530 - 69927 tcagcta---------atttttgtattattagtagagat-ggagttttaccatgttggccaggctg-------gtcttgaactcctggcctcaagcgatctgcctgtcttcgtctctcaaagtgttaagattacaggtgtgagccaccatgcctggccagtttcagctcttacatttaggtctttggtacattttgagttaatatttgtatatggtgtgaggta-gggtccaaatgcattctcttgcatgtgcttatccagctgtccaagcactgtttgttaaatctatcttttctctttcttcatttttctctttctttctttctttctttcttcctttctctctctctttctttctttctctgtttctttctttcttcctttctttctttttttgatacagggtcttgctctgtcacctaggctgaagtgcagtggtgtgattatggctcatttcagctt-ccagcttctgggctcaagtgctcctcctacctcagctccctgggtagctgggactat-------------aggcacgcaccacca-cacctggctaattt i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 380027 2823 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=14024.000000 s hg38.chr3_KI270779v1_alt 78591 7 + 205312 taatctt s panTro5.chr3 200064128 7 + 202621043 taatctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 44983 7 + 190779 taatctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6965 7 + 106623 tAATCtt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819004 7 + 123690457 taatctt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 878386 7 - 74750902 tagtcta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 416784 7 + 17725628 taatcta i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 32205 7 - 69927 taatcta i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e otoGar3.GL873829 380027 2823 - 608964 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29035633 862 + 31377067 I e cebCap1.NW_016107444v1 375944 15 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=4095.000000 s hg38.chr3_KI270779v1_alt 78598 1 + 205312 t s panTro5.chr3 200064135 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 44990 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6972 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819011 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 878393 1 - 74750902 t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 416791 1 + 17725628 t i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 32212 1 - 69927 t i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 382850 1 - 608964 t i otoGar3.GL873829 I 2823 C 0 s canFam3.chr33 29036495 1 + 31377067 T i canFam3.chr33 I 862 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e mm10.chr16 65400166 720 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e cebCap1.NW_016107444v1 375944 15 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=-24450.000000 s hg38.chr3_KI270779v1_alt 78599 7 + 205312 ---tttT-----TTT s panTro5.chr3 200064136 7 + 202621043 ---tttc-----ttt i panTro5.chr3 C 0 I 11 s panPan2.chrUn_NW_014024201v1 44991 7 + 190779 ---tttc-----ttt i panPan2.chrUn_NW_014024201v1 C 0 I 11 s gorGor5.CYUI01000576v1 6973 6 + 106623 ---ttt------ttt i gorGor5.CYUI01000576v1 C 0 I 11 s nomLeu3.chr11 120819012 7 + 123690457 ---tttt-----ttt i nomLeu3.chr11 C 0 I 9 s calJac3.chr17 878394 8 - 74750902 ---tttt-AAAA--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 416792 9 + 17725628 ---ttttAAAAA--- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 32213 8 - 69927 ---tttA-AAAA--- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 382851 3 - 608964 ---ctc--------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65400886 3 - 98207768 ---TCT--------- i mm10.chr16 I 720 C 0 s canFam3.chr33 29036496 7 + 31377067 CTGTCTC-------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7387633 2330 + 22200726 I e micMur3.chr1 25866639 2151 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e cebCap1.NW_016107444v1 375944 15 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=6552.000000 s hg38.chr3_KI270779v1_alt 78606 2 + 205312 TT s panTro5.chr3 200064154 2 + 202621043 tt i panTro5.chr3 I 11 C 0 s panPan2.chrUn_NW_014024201v1 45009 2 + 190779 tt i panPan2.chrUn_NW_014024201v1 I 11 C 0 s gorGor5.CYUI01000576v1 6990 2 + 106623 tt i gorGor5.CYUI01000576v1 I 11 C 0 s nomLeu3.chr11 120819028 2 + 123690457 tt i nomLeu3.chr11 I 9 C 0 s proCoq1.NW_012133858v1 7389963 2 + 22200726 TT i proCoq1.NW_012133858v1 I 2330 C 0 s otoGar3.GL873829 382854 2 - 608964 tt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65400889 2 - 98207768 TT i mm10.chr16 C 0 C 0 s canFam3.chr33 29036503 2 + 31377067 TT i canFam3.chr33 C 0 C 0 e micMur3.chr1 25866639 2151 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 32221 0 - 69927 C e cebCap1.NW_016107444v1 375944 15 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 878402 0 - 74750902 C e saiBol1.JH378146 416801 0 + 17725628 C e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=10098.000000 s hg38.chr3_KI270779v1_alt 78608 3 + 205312 TTT s panTro5.chr3 200064156 3 + 202621043 ttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45011 3 + 190779 ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6992 3 + 106623 ttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819030 3 + 123690457 ttt i nomLeu3.chr11 C 0 C 0 s micMur3.chr1 25868790 3 - 114275543 TTT i micMur3.chr1 I 2151 C 0 s proCoq1.NW_012133858v1 7389965 3 + 22200726 TTT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 382856 3 - 608964 TTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65400891 2 - 98207768 -TT i mm10.chr16 C 0 I 1 s canFam3.chr33 29036505 3 + 31377067 TCT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 32221 0 - 69927 C e cebCap1.NW_016107444v1 375944 15 - 6778120 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e calJac3.chr17 878402 0 - 74750902 C e saiBol1.JH378146 416801 0 + 17725628 C e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=1007059.000000 s hg38.chr3_KI270779v1_alt 78611 144 + 205312 AATGTTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGAACCTTTGCTGTCTTGGGACGGATCACCGCTGCAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGCACCAGACTGCCACCCAGACCACAGTGTCCTC s panTro5.chr3 200064159 144 + 202621043 aacgttcctttttctCCAGGCAGCTGTTCCCAACCCCAGAACCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTACCCAGACCACAGTGTCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45014 144 + 190779 aacgttcctttttctCCAGGCAGCTGTTCCCAACCCCAGAACCTTTGCTGTCTTGGAACGGATCACCACTGCAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTACCCAGACCACAGTGTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 6995 142 + 106623 AACGTTCCTTTTTCTCCAGGCAGCTGTTCCCAA-CCCAGAACCTTTGCTGTCTTGGAACAGATCACCACTGCAA-AGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTACCCAGACCACAGTGTCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819033 144 + 123690457 AACGTTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGCACCTTTGCCGTCTTGGAACGGATCACCACTGCAAGAGGGGAAGTTGCTACTGTGGTGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGTCCTC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 878402 144 - 74750902 AATGTTCCTTGTTCTCCAGGCAGCTGCTCCCAACCCCAGCGCCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAGGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACTACAGTCTCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 416801 144 + 17725628 AATATTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGCGCCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAGGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGTCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 375959 144 - 6778120 AATATTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGCGCCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAGGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGTCCTC i cebCap1.NW_016107444v1 I 15 C 0 s aotNan1.NW_018503669v1 32221 144 - 69927 AATGTTCCTTTTTCTCCAAGCAGCTGCTCCCAACCCCAGCGCCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAGGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGTCCTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25868793 144 - 114275543 AATGCCCCTTTTTCTCTAGGCAGTTGCTCCCAACCCCAGGTCCTCTGCTGCCTTGGAACAGATCACCACTGCAAGAGGGGAAGCTGCTATTGTGATGAATTCTGCCATGTGGTACTAGATTGCTGCCCAGACCACAGTGCCCTC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7389968 144 + 22200726 AATGTCCCTTTTTCTCTAGGCAGTTGCTCCCAACCCCAGCTCCTCTGCTGCCTTGGAACAGATCACCACTGCAAGAGGGGAAGCTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGCCCTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 382859 144 - 608964 AATGTCCCTCTTTCTTTAGGAAGTTGCTCCCAACCCCAGCTCCTCTGCTGCCTGGGGACAGATCACCACTGCAAGAGGGAAAGCTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGCCCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65400894 144 - 98207768 AATGTCTCCTCTCCTCCAGGCAGTTGTTCCCAGCCCCAGCCTCTCTGCTGCCCCGGAGAGGATTATGGCTGCAAGAGAGGAAACTGCTATTGTGATAAATTCTGCCGTGTGCTATCAGACTGCTGCCCAGACCACGAGACCCTC i mm10.chr16 I 1 C 0 s canFam3.chr33 29036508 140 + 31377067 CATGTCCCTTCT-CTGCAGGCAGCTGCTCCCAACCCC-GCCCGTCTGCTGCCCCGGATCAGA-CACCATCGCAGGAGAGGAAGCTGCTG-TGTGACGAATCCTGCCACGTGGCATCACACTGCTGCCCAGGCCACCGTGCCCTC i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 491472 2596 + 19675229 I e colAng1.NW_012118932v1 400021 2213 + 7796314 I e manLeu1.NW_012102020v1 516126 2926 - 1977891 I e chlSab2.chr15 364845 2237 - 91754291 I e cerAty1.NW_012004056v1 422864 5020 + 16847902 I e macFas5.chr2 15656 2558 + 192460366 I e rheMac8.chr2 202408937 2559 + 204787373 I a score=50483.000000 s hg38.chr3_KI270779v1_alt 78755 3 + 205312 TGC s panTro5.chr3 200064303 3 + 202621043 TGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45158 3 + 190779 TGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7137 3 + 106623 TAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819177 3 + 123690457 TGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202411496 3 + 204787373 tgC i rheMac8.chr2 I 2559 C 0 s macFas5.chr2 18214 3 + 192460366 tgC i macFas5.chr2 I 2558 C 0 s macNem1.NW_012014355v1 494068 3 + 19675229 tgC i macNem1.NW_012014355v1 I 2596 C 0 s cerAty1.NW_012004056v1 427884 3 + 16847902 tgC i cerAty1.NW_012004056v1 I 5020 C 0 s manLeu1.NW_012102020v1 519052 3 - 1977891 tgC i manLeu1.NW_012102020v1 I 2926 C 0 s colAng1.NW_012118932v1 402234 3 + 7796314 tgC i colAng1.NW_012118932v1 I 2213 C 0 s calJac3.chr17 878546 3 - 74750902 TGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 416945 3 + 17725628 TGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376103 3 - 6778120 TGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32365 3 - 69927 TGC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25868937 3 - 114275543 TGC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7390112 3 + 22200726 TGC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 383003 3 - 608964 TGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65401038 3 - 98207768 TGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29036648 3 + 31377067 CGC i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e chlSab2.chr15 364845 2237 - 91754291 I a score=1753958.000000 s hg38.chr3_KI270779v1_alt 78758 130 + 205312 AACCCTGGTAACTCACATACAGGCCCGATTCCACCTACAGCAAAGctggatgcgatggctggcagaggcaaaccctttgcctgcacttcaggccaaagccgggatgtggcctagatggttcctaaggtcc s panTro5.chr3 200064306 130 + 202621043 AACCCTCGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCAGAGGCAAACCCTTTGCCTGCACTTCAGGCCAAAGCCgggatgtggcctagatggttcctaaggtcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45161 130 + 190779 AACCCTCGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCagaggcaaaccctttgcctgcacttcaggccaaagccgggatgtggcctagatggttcctaaggtcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7140 130 + 106623 AACCCTCGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCAGAGGCAAACCCTTTGCCTGCACTTCAGGCCAAAGCCgggatgtggcctagatggttcctaaggtcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819180 130 + 123690457 AACCCTGGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCAGAGGCAAGCCCTTTGCCTGCACTTCAGgccaaagccaggatgtggcctagatggttcctaaggtcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202411499 130 + 204787373 AACCCTGGTAACTCACACACAGGTCCGGTCCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCGTTTGCCTGCACTTCAGGCCAAAGCCgggatgcgacctagatggttcctaaggtcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 18217 130 + 192460366 AACCCTGGTAACTCACACACAGGTCCGGTCCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCGTTTGCCTGCACTTCAGGCCAAAGCCgggatgcgacctagatggttcctaaggtcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 494071 130 + 19675229 AACCCTGGTAACTCACACACAGGTCCGGTCCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCGTTTGCCTGCACTTCAGGCCAAAGCCgggatgcgacctagatggttcctaaggtcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 427887 130 + 16847902 AACCCTGGTAACTCACACACAGGTCCGGTTCCATCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCCTTTGCCTGCACTTCAGGCCAAAGCCgggatgtgacctagatggttcctaaggtcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367082 130 - 91754291 AACCCTGGTAACTCACACACAGGTCTGTTTCCACCCACGGCAAAGCTGGATGCTGTGGTTGGCAGAGGCAAGCCCTTTGCCTGCACTTCAGGCCAAAGCCgggatgtgacctagatggttcctaaggtcc i chlSab2.chr15 I 2237 C 0 s manLeu1.NW_012102020v1 519055 130 - 1977891 AACCCTGGTAACTCACACACAGGTCCGGTTCCATCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCCTTTGCCTGCACTTCAGGCCAAAGCCgggatgtgacctagatggttcctaaggtcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 402237 129 + 7796314 AACCCTGGTAACGCACACACAGGTCTGTTTCCACCCACAGCAAAGCCGGATGCTACGGTTGGCAGAGGCAAGCCCTTTGCCTGCACTTCAGGCCAAAGCCGGG-TGTCACctcgatggttcctaaggtcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 878549 130 - 74750902 AACCCTGGTAACTCACATGTAGGCTTGTTTCCACCTACAGCAAAGCTGCATGCTGTGGTTGGCAGAGGCGAGCCCTTTGCCTGCATGTCAGGCCAAAGCTGGGACGTGCCCTGGATGGTTCCAAAGGCCC i calJac3.chr17 C 0 I 68 s saiBol1.JH378146 416948 130 + 17725628 AACCCTGGTAACTCACATGTAGGCTTGTTTCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGGCGAGTCCTTTGCCTGCATGTCAGGCCAAAGCCAGGACATACCctggatggttcctaaggtcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376106 130 - 6778120 AACCCTGGTAACTCATATGTAGGCTTGTTTCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGGCGAGCCCTTTGCCTACATGTCAGGCCAAAGCCGGGACGTGCCctggatagttcctaaggtcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32368 130 - 69927 AACCCTGGTAACTCACACGTAGGCTTGTTTCCACCCAGAGCAAAGCTGGACGCTGTGGTTGGCAGAGGCGAGCCCTTTGCCTGCATGTCAGGCCAAGGCCgggacgtgcactggatggttcctaaggtcc i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25868940 130 - 114275543 AACCCTGACAGCTCACATGCAGGCTCATTTCCACTCGTGGCAGAGCTGGAGGCTGCAGTAGAGAGAGGCAAGCTCTTTGCTTGTACTTTAGGGCAAGGCCAGTATGtggactggatggctcctaaggtcc i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7390115 130 + 22200726 AACCCTGATGGCTCACATGCAGGCTCATTTCCACGCACGGCAGAGCTGGATGCTGCGGTAGAGAGAGGCAAGCTCtttgctcgtactgtaggccaaggccagcgtgtggactggatggctcctaaggtcc i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 383006 130 - 608964 AACCCTGATCACCCCCATGCAGGCTCAGTTCCACTCACAGCAGAGCCAAATACAGCAGGAGAGAGAGGCAAGCTCTTTGCCTGGACTTTAGGCTCAGGCCAGCATGTGGACTGCATGGCTCTACAGGTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65401041 118 - 98207768 AACTCCAGTGACCTGCATGCAGGCTCTCTTCCACCCGTGGCTCAGCTGGATGCTGTAACCCACAGAGGCAA-------GCCTGGACTTTAGATGGTGGCCGC--TATGGAGTGGGTGGCACC--ACATC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29036651 125 + 31377067 CACCCAGGTAA-TCACACGCCAGCTCCTTCCCACC--CGGCGGGGCTGGGTGCTGTGATGGACAGAGGCGGCCCGTCCAC--GCgcctcaggccaaggcccaggtgtggactggaaggccccggaggtgc i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I a score=329672.000000 s hg38.chr3_KI270779v1_alt 78888 23 + 205312 ctgacaatcctg-agatct-tg-CAT s panTro5.chr3 200064436 23 + 202621043 ctgacaatcctg-agatct-tg-CAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45291 23 + 190779 ctgacaatcctg-agatct-tg-CAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7270 23 + 106623 ctgacaatcctg-agatct-tg-CAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819310 23 + 123690457 ctgacaatcctg-agatct-tg-CAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202411629 23 + 204787373 ctgacaatcctg-agatct-tg-cat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 18347 23 + 192460366 ctgacaatcctg-agatct-tg-cat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 494201 23 + 19675229 ctgacaatcctg-agatct-tg-cat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 428017 23 + 16847902 ctgacaatcctg-agatct-tg-cat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367212 23 - 91754291 ctgacaatcctg-agatct-tg-CAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519185 23 - 1977891 ctgacaatcctg-agatct-tg-cat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 402366 23 + 7796314 ctgacaatcctg-agatct-tg-cat i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 417078 23 + 17725628 ctgacaatcctg-agatct-tg-cat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376236 23 - 6778120 ctgacaatcctg-agatct-tg-cat i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32498 23 - 69927 ctgacaatcctg-agacct-tg-CCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869070 24 - 114275543 ctaacaatcttg-agatctgtg-cat i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7390245 24 + 22200726 ctgacaatcctg-agatccgtg-cat i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 383136 24 - 608964 CTGACAATCCTG-AGATCCTTG-TAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65401159 24 - 98207768 CTGATGGTCCTGCAGTTCT-TA-TAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29036776 24 + 31377067 ctgacaattctg-ggatcc-tgacat i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e calJac3.chr17 878679 68 - 74750902 I a score=1020263.000000 s hg38.chr3_KI270779v1_alt 78911 82 + 205312 CTTG-----TCTATTTCAGGTCAAAGGTG----CCTACATGCTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT s panTro5.chr3 200064459 82 + 202621043 CTTG-----TCTATTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45314 82 + 190779 CTTG-----TCTATTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7293 82 + 106623 CTTG-----TCTATTTCAGGTCAAA-GTG----CCTACATGTTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA-CCCTGCTACTCCTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819333 81 + 123690457 CTTC-----TCTATTTCAGGTCAAAGGTG----CCTACATATTCCTTCTAGCTTT-TTTC-CCTGATGTTCTTTGCCA--CCTGCTACTCCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202411652 82 + 204787373 cctg-----tcTATTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTTCTTGCCA--CCTGCTACTCCTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 18370 82 + 192460366 cctg-----tcTATTTCAGGTCAAAGGTG----CCTACATATTCCTTCTAGCTTTGTTCC-CCTGATGTTTCTTGCCA--CCTGCTACTCCTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 494224 82 + 19675229 cctg-----tcTATTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTTCTTGCCA--CCTGCTACTCCTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 428040 82 + 16847902 cctg-----tcTCTTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367235 82 - 91754291 CCGG-----TCTATTTCAGGTCAAAGGTA----CCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519208 82 - 1977891 cctg-----tcTCTTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 402389 82 + 7796314 cctg-----tcTATTTCAGGTCAAAGATG----CCCACATGTTCCTTCTAGCTTTGTTTC-CCTGATGTTCCGTGCCA--CCTGCTACTCCTCT i colAng1.NW_012118932v1 C 0 I 312 s calJac3.chr17 878747 81 - 74750902 CTTGACAATCTGAGATCAGGTCAAAGGTG-----CTACGCGT--CTTCTAGCTTTGTTT--CATGATG-TCCTTGCCA---CTGCTACTCCTCT i calJac3.chr17 I 68 C 0 s saiBol1.JH378146 417101 77 + 17725628 ---------cctatTTCAGGTCAAAGGTG----CCTACATGTTCCTTCTAGCTTTGTTT--CCTGATGTTCCTTGCCA--CCTGCTACTCCTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376259 77 - 6778120 ---------cctaGTTCAGGTCAAAGGTG----CCCACATGTTCCTTCTGGCTTTGTTT--CCTGATATTCCTTGCCG--TCTGCTACTCCTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32521 77 - 69927 ---------CCTGTTTCAGGTCAAAGGTG----CCTATATGTTCCTTCTAGCTTTGTTT--CCTGATGTTCCTTGCCA--CCTGCTGCTCCTCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869094 84 - 114275543 tctg-----tcTATTTTGTGTCAAAAGTGTCTACCTGCATATTCCTCCTAGC--TGTTTC-CTCAGTGCTCCTTGCCA--CCTGCTGCTCCCCT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7390269 86 + 22200726 tctg-----tcCATTTTGTGTCAAAAGTGCCTGCCTGCATGTTCCTCCCAGCTTTGTTTC-CCCAGTGCTCCTTGCCA--CCTGCTGCTCCCCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 383160 82 - 608964 TCTA-----TTTCTTTTGTATCAAAAGCG----CTTGCATGTTCCTCCCAGCTTTGTTTT-CTCAGTGCTCCTTGCCA--GCTGCTGCTCCCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65401183 65 - 98207768 TCTA-----TGCATTTCACGCTCAAAACT----TCTTCACGTTCCTCTCGACTCCCTT------------------CA--CCTGCTGCTCTCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29036800 83 + 31377067 tttg-----tcCATTTCATGTCAAAAGTG----CC--CACGTTCCTCCCAGCTTTGTCTCACCCCCCACCCCACCCCACCCCTGCTGCTCCCCT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I a score=3950624.000000 s hg38.chr3_KI270779v1_alt 78993 299 + 205312 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGTTCAGCTGTCC-GTGGTAGACATG--AGGGTAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCA--TCTTGCAGTAT-GGATGTCTCTTGACTGGTACCGTGTAGACTTTTGAGGGCACACAGGAGTCTGCAGAG-AGATACT-GGGGACATTGAGCAGCAG-CAG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAA-CATTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA s panTro5.chr3 200064541 299 + 202621043 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGTTCAGCTGTCC-GTGGTAGACATG--AGGGTAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCA--TCTTGCAGTAT-GGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCACACAGGAGTCTGCAGAG-AGATACT-GGGGACATTGAGTAGCAG-CGG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAA-CATTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45396 299 + 190779 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGTTCAGCTGTCC-ATGGTAGACATG--AGGGTAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCA--TCTTGCAGTAT-GGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCACACAGGAGTCTGCAGAG-AGATACT-GGGGACATTGAGTAGCAG-CGG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAA-CATTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7375 305 + 106623 CTGAGCTACTTTTCCAGGT-CCCACAAGGGAGAGGTTCAGCTGTCCAGTGGTAGACATGGAGGGGTAGAGAATGAGGTTGGTTGGGTTCCACTTA----CC-TTCTATCA--TCTTGCAGTATGGGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCACACAAGAGTCTGCAGAG-AGATACT-GGGGACATTGAGCAGCAGCCGG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAA-CATTTACCTTGTGTTTCTCTCAGCTTATCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819414 298 + 123690457 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGTTCAGCTGTCC-GTGGTAGACATG--AGGGTAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCG--TCTT-CAGTAT-GGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCAGAG-AGATACT-GGGGATGCTGAGCAGCAG-CAG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAA-CGTTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202411734 294 + 204787373 CTGAGCTGCTTTTCCAGGT-TCCAC-AG-----GGTTCAGCTGTCC-GTGGTAGACATG--AGGGCAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCT--TCTTGCAGTAT-GGCTGTCTCTTGACTGGCACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCGGAG-AGATGCT-GGGGACGTTGAGCAACAG-CAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAA-CGTTCACCTTGTATTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 18452 294 + 192460366 CTGAGCTGCTTTTCCAGGT-TCCAC-AG-----GGTTCAGCTGTCC-GTGGTAGACATG--AGGGCAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCT--TCTTGCAGTAT-GGCTGTCTCTTGACTGGCACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCGGAG-AGATGCT-GGGGACGTTGAGCAACAG-CAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAA-CGTTCACCTTGTATTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 494306 288 + 19675229 CTGAGCTGCTTTTCCAGGT-TCCAC-AG-----GGTTCAGCTGTCC-GTGGTAGACATG--AGGGCAGAGAATGACG-T------GTTCCACTTA----CCTTTCTATCT--TCTTGCAGTAT-GGCTGTCTCTTGACTGGCACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGTGGAG-AGATGCT-GGGGACGTTGAGCAACAG-CAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAA-CGTTCACCTTGTATTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 428122 299 + 16847902 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGTTCAGCCTTCC-GTGGTAGACATG--AGGGCAGAGAATGAGG-TGGTTGGTTTCCACTTA----CCTTTCTAGCT--TCTTGCAGTAT-GGCTGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCGGAG-AGATACT-GGGGACGTTGAGCAACAG-CAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAA-CATTCACCTGGTGTTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367317 299 - 91754291 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGGTCAGCTGTCC-GTGGTAGACATG--AGGGCAGAGAATGAGG-TGGTTGGGTTCCACTTA----CCTTTCTATCT--TCTTGCAGTAT-GGCCATCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTTCGGAG-AGATACT-GGGGACGCTGAGCAACAG-CAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAA-CGTTCACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519290 299 - 1977891 CTGAGCTACTTTTCCAGGT-TCCAC-AGGGAGAGGTTCAGCCTTCC-GTGGTAGACATG--AGGGCAGAGAATGAGG-TGGTTGGTTTCCACTTA----CCTTTCTATCT--TCTTGCAGTAT-GGCTGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGTGGAG-AGATACT-GGGGACGTTGAGCAACAG-CAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAA-CATTCACCTGGTGTTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 402783 299 + 7796314 cTGAGCTACTTTTCCAGGT-TCCGC-AGGGAGAGGTTCAGCTGTCC-GTGGCAGACGTG--AGGGCAGAGAACGAGG-CGGTTGGGTTCTGCTGA----CCTTTCTGTCT--TCTTGCAGTGT-GGCTGTTTCTTGACTGGTACCGTGTACACTTTTGAGGGCAGACAGGAGTCTGCGGAG-AGATGCT-GGGGACGTTGAGCAACAG-CAG--TGGGGCTGGGAGGCAGAAATGAGGACAAGGA-CGTTCACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i colAng1.NW_012118932v1 I 312 C 0 s calJac3.chr17 878828 295 - 74750902 CTGAGCTACTTTTCCAGGT-TCCAC-AGAGAGAGGTTAAGCTGTCT-GTGGTAGA---G--AAGA-GGAGAAAGAGG-TGGCTGGGGTCCACTTA----ACGTTCTCTCT--TCTTGCAGTAT-GGATGCCTCTTGACTGGCAGCAGGTAGACTTTTGAGGGGAGACAGGAGTCTGCAGAG-AGATGCC-GGGGATGCTGGGCAGCAG-CAG--TGGGTGTGGGAGGCAGAAATGATGACAGGAG-CCTTCACCTTGTGTTTCTTTCAGCTTCTCAGATGACCAAGATGGGGCTGCAGATGGTGCTGAGGATGGAGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417178 293 + 17725628 CTGAGCTACTTTTTCAGGT-TCCAC-AGAGAGAGGTTAAGCTGTCT-GTGGTAGAGATG--AGGA-GGAGAAAGAGG-TGGCTGGGTCCCACTTA----ACGCTCTC-----TCTTGCAGTGT-GGATGTCTCTTGACCAGT-GCAGGTAGACTTTTGAGGGGAGACAGGAGTCTGCAGAG-AGATGCT-GTGGATGTAGGGCAGCAG-CAG--TGGGTGTGGGAGGCAGAGATGATGACAGGAG-CTTTCACC-TGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGGGCTGCAGATGGTGCTGAAGATGGAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376336 297 - 6778120 CTGAGCTACTTTTCCAGGT-TCCAC-AGAGAGAGGTTACGCTGTCT-GTGGTAGAGATG--AGGA-GGAGAAAGAGG-TGGCTGGGTTCCACTTA----ACGCTCTCTCT--TCTTGCAGTAT-GGATGTCTCTTGACTGGT-GCCGGTAGACTTTTGAGGGGAGACAGGAATCTGCAGAG-AGACGCT-GCGGATGTTGGGCAGCAG-CAG--TGGGTGTGGGAGGCAGAAATGACGACAGGAC-CTTTCACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGGGCTGCAGATGGTGCTGAGGATGGAGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32598 298 - 69927 CTGAGCTACTTTTCCGGGT-TCCAC-AGAGAGCGGTTAAGCTGTCT-GTGGTAGAGATG--AGGA-GGAGAAAGAGG-TGTCTGGGTTCCACTTA----CTGTTCTCTCT--TCTTTCAGTGT-GGATGTCTCCTGACTGGTAGCAGGTAGACTTTTGAGGGGAGACAGGAGTCTGTGGAG-AGACGCT-GGGGATGTTGGGCAGCAG-CAG--TGGGTGTGGGAGGCAGAAATGAAGACAGGAG-CTTTGACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGGGCTGCAGATGGTGCTGAGGATGGAGAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869178 296 - 114275543 CTGGGCCACTTTGTCAGGT-TCCAC-AGGGAGAGGTTAAGCTGTCA-GTGTCAGGGATG--AAGGAGGGGAATGAGG-TGGTT-----CCACCTA----ACTCCCTTCCATTTCTTGCACTGT-GGATGCCTTTTGGCTGGTGAAGTGTAGACTTTTGAGGGCAGACAGGAGTCTGCAGAG-AGGTTCC-GGGGAAGATGGGGAGCAG-CAG--TGGGGGTAGGAGGCCGAGATGAGGACAGACG-ATTCCAACTTGTGTTTCTCTCAGCTTCCCAGGCAACCAGGATGGTGCTGCAGATGGTGCTGAGGACGGACAC i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7390355 296 + 22200726 CTGGGCCACTTTGTCAGGT-TCCAC-AGGGAGAGGTTAAGCTGTCA-GTGGTAGGGATG--AAGGAGGGGAATGAGG-TGGTT-----CCACCTA----ACTCCCTGCCTTCTCTTGCAGTGT-GGATGCCTCTTGGTTGGTCCAGTGTAGACTTTTGAGGGCAGACAGGAGTCTGCAGAG-AGGTGCC-GGGGAAGTTGGGCAGCAG-CAG--TGGGGGTAGGAGGCCGAGACAAGGACAGAAG-CTTCCAACCTGTGTTTCTCTCAGCTTCCCAGACAACCAGGATGGTGCTGCAGATGGTGCTGAGGACAGACGC i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 383242 297 - 608964 CTGAGGCATTTTCCCAGGT-TCCCC-AGGGAGAGGTTAAGCTGTCA-GTGGTGGGGATG--AAGGTGGGGAATGAGG-TGGTT----CCCACCTA----TCTCCCTCCCTTCTCCTGCAGGGT--GATGCCTCTTGGCTGGTCCCATGTATACTTTTGAGGGCAGGCAGGAGTCTGCAGAG-AGGTGCTGGGGGAAGATGAGCAGCAG-TAG--T-GGGGTGGGAGGCTGAGATGAGGATAGCAGCCTCCCAACCTGTGTTTCTCTCAGCTCCTCAGACGACCAGGATGGTGCTACAGATGGTGCTGAGGACAGACAC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65401248 275 - 98207768 CCAAGCCTCTCTTT-AGGT-CCCAC-AGGGAGAGGCTGAGCTATCA-GTGGTGAAAACC--AGGCTAGGAAAGGTGG-TGGGC--------CCAA----CCTTT--------TCTTGCTCTAT-GTATGCCGCTTGGCC----TTGCTTGGAGATGTCAGAGCAG--AAGAGTCCTCAGAG-AGGTGTT-GGGGATGTTGACCAGAAG-TGGGCTGGGGGAGAGGAGCACGGATGAAGACAAG-G-CCTTCACCCTGTGTT----CCAGCCTTTCACACTCCCAAGATGGTGCTACAGATGGTGCTGAGGACCGAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29036883 289 + 31377067 CTGAGCTACTTTCCCAGATGCCCAC-AGGGAGAGCTTAATCTGGTG-GT--TGGGGATC--AGGGTGGGGAGTGGGG-CGATGGGGTTCCCCCCAACGGCCCTTCCATC---TCTTGAAATAC-AGATGCCTCTTGACCTGC-CCATGTAGACTTTCGAGGG---------GTTTGCAGAGTGGGAGCT-GAGGAGGTTAGGCAGCCG-GAG--GGGGCGTGGGAGCCCCGGGTGGGGACAGGAG-CTGCCGCCTGGAGTTTC--TCAGCTTCTCAGA-ACCCCGGGTGGTGCCGCGGGTGGTGCTGAGGCCGCAGAA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I a score=19496.000000 s hg38.chr3_KI270779v1_alt 79292 4 + 205312 CCCA s panTro5.chr3 200064840 4 + 202621043 CCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45695 4 + 190779 CCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7680 4 + 106623 CCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819712 4 + 123690457 GCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412028 4 + 204787373 CCCA i rheMac8.chr2 C 0 I 11 s macNem1.NW_012014355v1 494594 4 + 19675229 CCCA i macNem1.NW_012014355v1 C 0 I 11 s cerAty1.NW_012004056v1 428421 4 + 16847902 CCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367616 4 - 91754291 CCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519589 4 - 1977891 CCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403082 4 + 7796314 CCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879123 4 - 74750902 CCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417471 4 + 17725628 CCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376633 4 - 6778120 CCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32896 4 - 69927 CCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869475 3 - 114275543 ACC- i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 7390652 3 + 22200726 GCC- i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 383540 3 - 608964 CCC- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65401523 4 - 98207768 GCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29037172 2 + 31377067 GC-- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e macFas5.chr2 18746 0 + 192460366 C a score=730534.000000 s hg38.chr3_KI270779v1_alt 79296 80 + 205312 CCAAG-CCCCGCTAGGAGCCACCTAGACTGGATGCAGAGCATGGTGAGCTCCCTGCAGGTTCTCTGAGAAGGG--GTGGATGG s panTro5.chr3 200064844 80 + 202621043 CCAAG-CCCCGCTAGGAGCCACCTAGACTGGATGTAGAGCATGGTGAGCTCCCTGCAGGTTCTCTGAGAAGGG--GTGGATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45699 80 + 190779 CCAAG-CCCCGCTAGGAGCCACCTAGACTGGATGTAGAGCATGGTGAGCTCCCTGCAGTTTCTCTGAGAAGGG--GTGGATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7684 80 + 106623 CCAAGCCCCCGCTAGGAGCCA-CTAGACTGGATGCAGAGCATGGTGAGCTCCCTGCAGGTTCTCTGAGAAGGG--GTGGATGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819716 80 + 123690457 CTAAG-CCCCGCTAGGAACCACCTAGACTGGATGCAGAGCACGGTAAGCTCCCGGCAGTTTCTCCAAGAAGGG--GTGGATGG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 428425 80 + 16847902 CCAAG-CCCCGCTAGGAGCCACCTAGACAGGATGCAGAGCATGGTGAGCTCCCTGTAGGTTCTCTGAGAAGGG--GTGGATGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367620 80 - 91754291 CCAAG-CCCCGCTAGGAGCCACCTAGACCGGATGCAGAGCATGGTGAGCTCCCTGTAGGTTCCCCGAGAAGGG--GTGGATGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519593 80 - 1977891 CCAAG-CCCCGCTAGGAGCCACCTAGACCGGATGCAGAGCATGGTGAGCTCCCTGTAGGTTCTCTGAGAAGGG--GTGGATGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403086 80 + 7796314 CCAAG-CCCGGCTAGGAGTCGCCTAGACCAGACGCAGAGCACGGTGAGCTCCCTGTAGGTTCTCTGAGAAGGG--GTGGGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879127 80 - 74750902 CCCAG-CCCTGCTAGGAGCCGTCTAGACTGGGTGCAGAGCATGGTAAGCTCCCTGGAAGCTCTCCAAGAAGGG--GTGGATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417475 82 + 17725628 CCCAG-CCCTGCTAGGAGCCATCTAGACTGGGTGCAGAGCACGGTGAGCTCCCTGGAAGTTCTCCAAGAAGGGGTGTGGATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376637 79 - 6778120 CCCAG-CCCTGCTAGGAGCCATCTAGACTGGGTGCAGAGCACGGTGAGCT-CCTGGAAGTTCTCCAAGAGGGG--GTGGATGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32900 80 - 69927 CCCAG-CCCTGCTAGGAGCCACCGAGACTGGGTGCAGATCACAGTGAGCTCCCTGGAAGTTCTCCAAGAAGGG--GTGGATGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869478 79 - 114275543 CCAAG-CCCTACTAGAAGCAATCTAGACTGGGTGCAGAGCATGGTGAGCACCCTGAAGGTTCTCCC-ACAGGG--GTGGGTGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7390655 79 + 22200726 CCAAT-CCCTACTAGAAGCAATCTAGACTGGGTGCAGAGCATGGTGAGCACCCTGGAGGTTCTCCC-ACAAGG--TGGGGTGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 383543 79 - 608964 CCAAG-TCCTACTGGAAGCAATCCAGATTGGGTGAAGAGCACGGTGAGCACCCCG-AGGTTCTCCTGGAAGGG--GTGGGTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65401527 69 - 98207768 CTCGA-CTCAGCCAGGAACAATCAAGATTTGGTACAAAACATGGTGAGTGCCCTG-----------AGCGGGG--GTGGGGGG i mm10.chr16 C 0 I 1124 s canFam3.chr33 29037174 78 + 31377067 CCGCG-CCCTGGGAGACGCCGTCTGGGCC-GACGCAGAGCGCGGGGAGGGCCCTAGACGGTCTCCCAGACGGG--GCGGCGA- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=508190.000000 s hg38.chr3_KI270779v1_alt 79376 46 + 205312 CAGCCTGCTCCTTGCCTTTGTGCCCTCCAGGCCCCAAAGTCAGGGA s panTro5.chr3 200064924 46 + 202621043 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45779 46 + 190779 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7764 45 + 106623 CAGCCTGCTCCTTA-CTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819796 46 + 123690457 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 428505 46 + 16847902 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367700 46 - 91754291 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519673 46 - 1977891 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403166 46 + 7796314 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879207 46 - 74750902 CAGCCTACTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417557 46 + 17725628 CGGCCTGCTCCTTGCCTTTGTGGCCTCTAGACCCCAAAGTCAGGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376716 46 - 6778120 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 32980 46 - 69927 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869557 45 - 114275543 CAGCCTGCTCC-TGCCTTCATGGCCTCCAGGCCCCAAAGTCAGGGA i micMur3.chr1 C 0 I 20 s proCoq1.NW_012133858v1 7390734 45 + 22200726 CAGCCTGCTCC-TGCCTTCATGGCCTCCAGGCCCCAAAGTCAGGGA i proCoq1.NW_012133858v1 C 0 I 20 s otoGar3.GL873829 383622 45 - 608964 CAGCCTGCCCC-TGCTTTTGTGGCCTCCAGGCCCCAAGGTCAGAGA i otoGar3.GL873829 C 0 I 6 s canFam3.chr33 29037252 44 + 31377067 CAAGCTGCCCCTACCCCC--TGGCCTCCAGCCCCCAAAGTCAGGGA i canFam3.chr33 C 0 I 6 e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=79277.000000 s hg38.chr3_KI270779v1_alt 79422 12 + 205312 ACCAAAAGAAGA s panTro5.chr3 200064970 12 + 202621043 ACCAAAAGAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 45825 12 + 190779 ACCAAAAGAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 7809 12 + 106623 ACCAAAAAGAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120819842 12 + 123690457 ACCAAAGGGAGA i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 428551 12 + 16847902 ACCAAAGGGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 367746 12 - 91754291 ACCAAAGGGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 519719 12 - 1977891 ACCAAAGGGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403212 12 + 7796314 ACCAAAGGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879253 12 - 74750902 ACCAGAGGGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417603 12 + 17725628 ACCAGAGGGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 376762 12 - 6778120 ACCAGAGGGAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33026 12 - 69927 ACCAGAGGGAGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 383673 12 - 608964 ACCTAAGTGGGG i otoGar3.GL873829 I 6 I 2 s canFam3.chr33 29037302 12 + 31377067 ACCAGTCAGGAA i canFam3.chr33 I 6 C 0 e proCoq1.NW_012133858v1 7390779 20 + 22200726 I e micMur3.chr1 25869602 20 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=984281.000000 s hg38.chr3_KI270779v1_alt 79434 102 + 205312 AAGGGGCCGTAGCTAGGGCAGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCCGtctgtggacactgaaatttgaatctcatatacttt s panTro5.chr3 200064982 102 + 202621043 AAGGGGCCATAGCTAGGGCAGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttt i panTro5.chr3 C 0 I 5 s panPan2.chrUn_NW_014024201v1 45837 102 + 190779 AAGGGGCCATAGCTAGGGCAGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttt i panPan2.chrUn_NW_014024201v1 C 0 I 5 s gorGor5.CYUI01000576v1 7821 102 + 106623 AAAGGGCCGTAGCTAGGCCAGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttt i gorGor5.CYUI01000576v1 C 0 I 4 s nomLeu3.chr11 120819854 102 + 123690457 AAGGGGCCGTAGCTAGGGCCGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttt i nomLeu3.chr11 C 0 I 5 s cerAty1.NW_012004056v1 428563 102 + 16847902 AAGGGGCTGTATCTAGGGCAGAGC-TCCACTGCAATGATTGTTGTAGGGGTAGGAGCCAGGATTGCTCtctgtggacactgaaatttgaatctcatatacttt i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 367758 102 - 91754291 AAGGGGCTGTAGCTAGGGCAGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAACCAGGATTGCTGTCCGtggacactgaaatttgaatcgcatatacttt i chlSab2.chr15 C 0 I 5 s manLeu1.NW_012102020v1 519731 102 - 1977891 AAGGGGCTGTATCTAGGGCAGAGC-TCCACTGCAATGATTGTTGTAGGGGTAGGAGCCAGGATTGCTCtctgtggacactgaaatttgaatctcgtatatttt i manLeu1.NW_012102020v1 C 0 I 1465 s colAng1.NW_012118932v1 403224 102 + 7796314 AAGGGGCTGTAGCTAGGGCAGAGC-TCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttt i colAng1.NW_012118932v1 C 0 I 5 s calJac3.chr17 879265 102 - 74750902 AAGGGGCCTTCGCTATGGCAGAGC-TCCACTGCAATGATGGTTTTAGGGATAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaacctcatctacttt i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 417615 95 + 17725628 AAGGGGCCT------TAGCAGAGC-TCCACTGTGATGATCGGTTT-GGGGTAGGAGCCAGGATTGCTGTCTGCggacactgaaatttgaatctcatatacttt i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 376774 102 - 6778120 AAGGGGCCTTAGCTATGGCAGAGC-TCCACTGCAATGATCGGTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactaaaacttgaatctcatatacttc i cebCap1.NW_016107444v1 C 0 I 5 s aotNan1.NW_018503669v1 33038 102 - 69927 AAGGGGCCTTAGCTATGGCAGAGC-TCCACTGCAATGATCGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttt i aotNan1.NW_018503669v1 C 0 I 5 s micMur3.chr1 25869622 101 - 114275543 AAGGGGCCTGAGCTAGGGCAGAGC-TCCA-TGCAACGGTGGTTTTAGGGGTAGGAGCCAGGATTTCTGCCtatcgacactgaaatttgaatttcatatagttt i micMur3.chr1 I 20 I 5 s proCoq1.NW_012133858v1 7390799 101 + 22200726 AAGGGGCCTGAGCTAGGGCAGAGC-TCCA-TGCAATGGTGGTTTTAGGGGTAGGAGCCAGGATTTCTGCCtatggacactgaaatttgagtttcatatagttt i proCoq1.NW_012133858v1 I 20 I 5 s otoGar3.GL873829 383687 102 - 608964 AAGAGGCCTGACCTAGGTTGGAGCTTCCT-TGCAATGATGGTTTTAGGGATAGGAGCCATGAATTCTGCCtatggacactgaaatatgaatttcatatagttt i otoGar3.GL873829 I 2 I 5 s canFam3.chr33 29037314 101 + 31377067 AAGAGACCCGAG-TGGGGCAGAGC-CCTGCAGCAACCATGGTTTTAGGGCCCGGAGCCGTGGTTCCGGGCCGtggacactgacactgacattttatataattt i canFam3.chr33 C 0 I 5 e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=1501445.000000 s hg38.chr3_KI270779v1_alt 79536 169 + 205312 tgtgacaaaacattctt-cctcttttgttcttctcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttagcctatgagttgcac--aaaaacaggcagtggccagatttggcccatagacca-tagtttgctgactt-ctg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC s panTro5.chr3 200065089 169 + 202621043 tgtgacaaaacattatt-cttcttttgttcttctcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttaacctatgagttgcac--aaaaacaggcagtggccagatttggcccatagacca-tagtttgctgactt-ctg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC i panTro5.chr3 I 5 C 0 s panPan2.chrUn_NW_014024201v1 45944 169 + 190779 tgtgacaaaacattatt-cttcttttgttcttctcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttaacctatgagttgcac--aaaaacaggcagtggccagatttggcccatagacca-tagtttgctgactt-ctg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC i panPan2.chrUn_NW_014024201v1 I 5 C 0 s gorGor5.CYUI01000576v1 7927 168 + 106623 tgtgacaaaacattatt-cttcttttgttcttctcctaccatct-aaaa-----------------------------------tgtagaaaaacattcttagcctatgagttgcac--aagaacaggcagtggccagatttggcccatagacca-tagtttgctgactt-ctg------CCCTAAATCATCCTCCAT----TTC-TTCCTTCTGTGTCC i gorGor5.CYUI01000576v1 I 4 C 0 s nomLeu3.chr11 120819961 169 + 123690457 tgtcacaaaacattatt-cttcttttgttcttctcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttagcctatgagttgcac--aaaaacaggcagtggccagatttggtccatagacca-tagtttgctgactt-ttg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC i nomLeu3.chr11 I 5 C 0 s cerAty1.NW_012004056v1 428670 175 + 16847902 tgtcacaaaacattattccttcttttgttcttttcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttagcctatgagttgcac--aaaaacaggcagtggccagatttggcccatagaccg-tagttggctgacctcctg------CCCTAAGTCATCCTCCATTCTCTTCTTTCCTTCTGTGTCC i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 367865 174 - 91754291 tgtcacaaaacattatttcttcttttgttcttttcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttagcctatgagttgcac--aaaaacaggcagtggccagatttggcccatagaccg-tagtttgctgacct-ctg------CCCTAAGTCATCCTCCATTCTCTTCTTTCCTTCTGTGTCC i chlSab2.chr15 I 5 C 0 s manLeu1.NW_012102020v1 521298 175 - 1977891 tgtcacaaaacattattccttcttttgttcttttcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttagcctatgagttgcac--aaaaacaggcagtggccagatttggcccatagaccg-tagttggctgacctcctg------CCCTAAGTCATCCTCCATTCTCTTCTTTCCTTCTGTGTCC i manLeu1.NW_012102020v1 I 1465 C 0 s colAng1.NW_012118932v1 403331 174 + 7796314 tgccacaaaacattatttcttcttttgttcttttcctaccatctaaaaa-----------------------------------tgtag-aaaacattcttagcctatgagttgcac--aaaaacaggcagtggccagatttggcccatagaccg-tagtttgctgacct-ctg------CCCTAAGTCATCCTCCAATCTCTTCTTTCCTTCTGTGTCC i colAng1.NW_012118932v1 I 5 C 0 s calJac3.chr17 879372 172 - 74750902 tgtcacaaaacattatt-ctt-ttttgtttttctcctgccatctaacaa-----------------------------------cacag-aaaacattcttagcctatgagtcgtac--agacacaggcagtggccagatttgccccatagactg-tagtttgctgacct-ctg------CCATAGGTCATCCTCCATCCTCTTCTTTCCTTCTGTGTCC i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 417715 172 + 17725628 tgtcacaaaacattatt-ctt-ttatgtttttctcctaccatctaaaaa-----------------------------------tacag-aaaccattcttagcctatgagttgtac--agaaacaggcagtggccagatttgccccatagactg-cagtttgctgacct-ctg------CCATGAGTCATCCTCCATTCTCTGCTTTCCTTCTGTGTCC i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 376881 172 - 6778120 tgtcacaaaacattatt-ctt-ttttgtttttctcctaccatctaaaaa-----------------------------------tacag-aaaacattcttagcctatgaggtgtac--agaaacaggcagtggccagatttgccccatagcctg-tagtttgctgacct-ctg------CCATAAGTCATCCTCCATTCTCTTCTTTCCTTCTGTGTCC i cebCap1.NW_016107444v1 I 5 C 0 s aotNan1.NW_018503669v1 33145 172 - 69927 tgtcatgaaacattagt-ctt-ttttgtttttctcctaccatctaaaaa-----------------------------------tacag-aaaacattcttagcctatgagttgtac--agaaacaggcagtggccagatttgccccacagacta-tagtttgctgacct-ctg------CCGAAAGTCATCCTCCATTCTCTTCATTCCTTCTGTGTCC i aotNan1.NW_018503669v1 I 5 C 0 s micMur3.chr1 25869728 169 - 114275543 tgtcatgaaatattatt-ttcttttgatttttt-cctgccatctaaaaa-----------------------------------tgtag-gaaacattgttagcttgtgagctatac--aaaaataggcagtggccatatttggcccatgaactg-tggtttgctgaccT-TAG------CCCTAAATCA---TCTGTTCTTTTCTTTCCTTCTGTGTCC i micMur3.chr1 I 5 C 0 s proCoq1.NW_012133858v1 7390905 173 + 22200726 tgtcatgaaatattatt-ttcttttgattttttccctcccatctaaaaa-----------------------------------tgtag-aaaacactcttagcttgtgagctgtac--aaaaacaggcagtggccatatttggcccatgaactg-tggtttgctgacct-cGA------GCCTAAATCATCCTCCATTCTGTTCTTTCCTTCTGTGTCC i proCoq1.NW_012133858v1 I 5 C 0 s otoGar3.GL873829 383794 159 - 608964 tg----------------ctctcttggttttttgcctaccatagaaaaa-----------------------------------tgtag-aaagcattcttagcgtgtgagctgtac--aaaaacaggcaggggccagatttggctcatgaactgatggtttgctgatct-ctg------CCCCATATTATCTTCCATTCTTTTCTTTCCTTCTCTGTCC i otoGar3.GL873829 I 5 C 0 s canFam3.chr33 29037420 206 + 31377067 tgtcatgaaatattctt------ttgactttttttcaaccacttaaaagcgtgaaaagcattcttttttttttttttttttttttgtga-aaagcattcttaacttgtgatctggaccaaacaacctgcagcaagcccaatgcagccgcggattg-tggtttgctgccct-ctgCGTCACCTCTAAATCGTCCTTCG-----TATTTCTCTTCTGTGCCC i canFam3.chr33 I 5 I 1 e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=10920.000000 s hg38.chr3_KI270779v1_alt 79705 1 + 205312 T s panTro5.chr3 200065258 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46113 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8095 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820130 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 428845 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368039 1 - 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521473 1 - 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403505 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879544 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417887 1 + 17725628 T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377053 1 - 6778120 T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33317 1 - 69927 T i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25869897 1 - 114275543 T i micMur3.chr1 C 0 I 566 s proCoq1.NW_012133858v1 7391078 1 + 22200726 T i proCoq1.NW_012133858v1 C 0 I 394 s otoGar3.GL873829 383953 1 - 608964 T i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=21411.000000 s hg38.chr3_KI270779v1_alt 79706 3 + 205312 tgt s panTro5.chr3 200065259 3 + 202621043 tgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46114 3 + 190779 tgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8096 3 + 106623 tgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820131 3 + 123690457 tgt i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 428846 3 + 16847902 tgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368040 3 - 91754291 tgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521474 3 - 1977891 tgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403506 3 + 7796314 tgt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879545 3 - 74750902 tgt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417888 3 + 17725628 tgt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377054 3 - 6778120 tgt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33318 3 - 69927 tgt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 383954 3 - 608964 GGC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=1451958.000000 s hg38.chr3_KI270779v1_alt 79709 241 + 205312 tactgacaaagccactttccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgag-cctcaagcagtgcaggctttatttggtggccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcgtgagaccca-ggaagtcacagatacagggcatctttagtgaaggggctgagcattaaaagcaaggggaggagtggccaggtg s panTro5.chr3 200065262 241 + 202621043 tactgacaaagccactttccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgag-cctcaagcagtacaggctttatttggtggccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcgtgagaccca-ggaagtcacagatacagggcatctttagtgaaggggctgagcattaaaagcaaggggaggagtggccaggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46117 241 + 190779 tactgacaaagccactttccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgag-cctcaagcagtacaggctttatttggtggccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcgtgagaccca-ggaagtcacagatacagggcatctttagtgaaggggctgagcattaaaagcaaggggaggagtggccaggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8099 238 + 106623 tactgacaaagccactttccctaaaatggggtctttccctg-ttggtgccatgaagccaatatgcaaaagtgaaagtgag-cctcaagcagtgcaggctttatttggtggccatggaattgagaagtgagagcttggctcaccaaatcaacttttctgctcttgagaccca-ggaagtcacagatacagggcatctttagtgaaggggctgagca-taaaagcaaggggag--atggccaggtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820134 241 + 123690457 tactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccaaaagtgag-cctcaagcagtgcaggctttatttggtggccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcatgagaccca-ggaagtcacagatatagggcatctttagtgaaggggctgagcattaaaagcaaagggaggagtggccaggtg i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 428849 240 + 16847902 tactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaacccaaactgag-cctcaagcagtgcaggctttatttggt-gccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcgtcagaccca-ggaagtcacagatatagggcacctttagtgaaggggctgagcatgaaaagcaaggggaggagtggccaggag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368043 233 - 91754291 tactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagc-------caaaaccaaaactgag-cctcaagcagtgcaggctttatttggt-gccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcgtgaggccca-ggaagtcacagatataggccacctttagtgaaggggctgagcatgaaaagcaaggggaggagtggccaggag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521477 240 - 1977891 tactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaacccaaactgag-cctcaagcagtgcaggctttatttggt-gccatggaattgagaagtgagagcttggctca-caaatcaacttttctgctcgtgagaccca-ggaagtcacagatatagggcacctttagtgaaggggctgagcatgaaaagcaaggggaggaGAggccaggag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403509 240 + 7796314 tactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccacagctgag-cctcaagcagtgcaggctttatttggtggccatggaattgagaagtgagagctcggctca-caaatcaacttttctgctcgtgagaccca-ggaagccacaggtacagggcacctttcgtgaaggggctgagcattgaaagc-aggggaggagtggccgggag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879548 231 - 74750902 tactgacaaagccactccccctgaaatggggtctttccctgtttggtgccatgaagccaatatgtgaaacggaaagtgag-ggtcaagcagtacaggctttatttggtggccgtggaactgagaagtgagcgcttggctcg-caaatcaccatttctgcttgtgagactctgggaagtcgcagatataga-----------aagggggctgagcattaaaagcaagaggaggagtggccacgtg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 417891 230 + 17725628 tactgacaaagccactccccctgaaatgaggtctttccccgtttggtgccatgaagccaatatgcaaaatcgaaaatgag-tgtcaagcagggcaggctttatttggtggccatggaactgagaagtgagagcttggctcg-caaatcaacatttctgcttgtgagactct-ggaagtcacagatataga-----------aaaggggctgagcattaaaagcaagaggaggagtggccaggtg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377057 230 - 6778120 tactgacaaagccactccccctgaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgag-tgtcaagcagtgcaggctttatttggtggccatggaactcagaagtgagagcttggctcg-caaatcaacatttctgcttgtgagactct-ggaagtcacagatataga-----------aaaggggctgagcattaaaagcaagaggaggagtggccaggtg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33321 229 - 69927 tactgacaaagccact-cccctgaaatggggtcttgccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgagttgtcaagcagtgcaggctttatttggtggccatggaactgagaagtgagagcttggcccg-caaatcaacgtttctgcttgtgagactct-ggaagtcacagatacaga-----------aagggggctgagcattaaca-caagaggaggagtggccaggtg i aotNan1.NW_018503669v1 C 0 I 18 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 383957 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=55741.000000 s hg38.chr3_KI270779v1_alt 79950 12 + 205312 -c-aatggctcact s panTro5.chr3 200065503 12 + 202621043 -c-aatggctcact i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46358 12 + 190779 -c-aatggctcact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8337 12 + 106623 -c-aatggctcact i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820375 12 + 123690457 -c-aatggctcact i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 429089 12 + 16847902 -c-aatggctcact i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368276 12 - 91754291 -c-aaaggctcact i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521717 12 - 1977891 -c-aatggctcact i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403749 11 + 7796314 -c-aaaggctcac- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879779 13 - 74750902 cc-aatggcttact i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418121 14 + 17725628 ccaaacggcttact i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377287 13 - 6778120 cc-aatggcttact i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 383957 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I e aotNan1.NW_018503669v1 33550 18 - 69927 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e macFas5.chr2 18746 0 + 192460366 C e rheMac8.chr2 202412032 11 + 204787373 I a score=25020.000000 s hg38.chr3_KI270779v1_alt 79962 6 + 205312 cccata s panTro5.chr3 200065515 6 + 202621043 cccata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46370 6 + 190779 cccata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8349 6 + 106623 cccata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820387 6 + 123690457 cccata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 18746 6 + 192460366 CCCATA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429101 5 + 16847902 cccat- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368288 6 - 91754291 cccata i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521729 5 - 1977891 cccat- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403760 6 + 7796314 cccata i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879792 6 - 74750902 cctata i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418135 6 + 17725628 gctata i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377300 6 - 6778120 cctaca i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 383957 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I e aotNan1.NW_018503669v1 33550 18 - 69927 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e rheMac8.chr2 202412032 11 + 204787373 I a score=44085.000000 s hg38.chr3_KI270779v1_alt 79968 20 + 205312 aacccagaa-------ctttgggaggc s panTro5.chr3 200065521 20 + 202621043 aacccagaa-------ctttgggaggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46376 20 + 190779 aacccagaa-------ctttgggaggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8355 19 + 106623 aacccagaa-------ctttggga-gc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820393 20 + 123690457 aacccagaa-------cttcgggaggc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 18752 10 + 192460366 AACCCAGAAc----------------- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429106 9 + 16847902 aacccagaa------------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368294 9 - 91754291 aacccagaa------------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521734 9 - 1977891 aacccagaa------------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403766 15 + 7796314 aacccagaa-caatgg----------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879798 20 - 74750902 aacccagca-------ctttgggaggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418141 20 + 17725628 aatgcaaca-------cgttgggaggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377306 20 - 6778120 aacccagca-------cggtgggaggc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33568 20 - 69927 aacccagca-------ctttgggaggc i aotNan1.NW_018503669v1 I 18 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 383957 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I e macNem1.NW_012014355v1 494598 11 + 19675229 I e rheMac8.chr2 202412032 11 + 204787373 I a score=3853949.000000 s hg38.chr3_KI270779v1_alt 79988 432 + 205312 caaaatgagaggattgc-tgagaccaggagttcga-gaccatcctggtcaacatagtgatacacccccatctctacaaaaataaaaat-gaaaaaagcaaggggaggaatcatgtgttttctgggtctgggtggagaaattttcaaaaccagagtgccaccttcctat---ttg-tttttttatg-----ttatt--ttttc-------ccatcattgtcatgttggttg-ttgactgttacggtgttagtgggactgtcatttaacatggaaattagattataatgaagttagaggtcaaatgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatattcacggaggtcatgtgggtattgcact-----ggatgacaTCTT s panTro5.chr3 200065541 432 + 202621043 caaaatgagaggattgc-tgagaccaggagtttga-gaccatcctggtcaacatagtgatacacccccatctctacaaaaataaaaat-gaaaaaagcaaggagaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaccttcctat---ttg-tttttttatg-----ttttt--tttcc-------ccatcattgtcatgttggttg-ttgactgttaaggtgctagtgggactgtcatttaacatggaaattagattataatgaagttagaggtcaagtgagctgccatcttggattccatcactcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatatgcatggaggtcatgtgggtattgcact-----ggatgacaTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46396 434 + 190779 caaaatgagaggattgc-tgagaccaggagtttga-gaccatcctggtcaacatagtgatacacccccatctctacaaaaataaaaat-gaaaaaagcaaggagaggaatcatgtgttttctgggtctgggtagagaacttttcaaaaccagagtgccaccttcctat---ttg-ttattttatg---ttttttt--tttcc-------ccatcattgtcatgttggttg-ttgactgttaaggtgctagtgggactgtcatttaacatggaaattagattataatgaagttagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatattcatggaggtcatgtgggtattgcact-----ggatgacaTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8374 438 + 106623 caaaatgagaggattgc-tgagaccaggagttcgaggaacatcctggtcaacatagtgatacccccccatctctacaaaaataaaaat-gaaaaaagcaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaccttcctat---ttgttttttttatggttttttttt--ttttc-------ccatcattgtcatgttggttgtttgactgttaaggtgctagtgggactgtcatttaacatggaaattagattataataaagttagaggtcagctgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagcattaaggca-ggtagatattcatgga-gtcatgtgagtattgcact-----ggatgacaTCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820413 430 + 123690457 caaaatgagaggattgc-taagaccaggagttcga-gaccatcgtcgtcaacatagtgatacccccccatctctacaaaaataaaaat-gaaaaaagcaaggggaggaatcctgtgttttccgggtctgtgtggagaacttttcaaaaccacagtgccaccttgctat---ttg-tttttttatg-------gtt--ttttc-------tcatcattgtcatgttggttg-ttgactgttacggtgctagtgggactgtcatttagcatggaaattagatcataatgaagttagaggtcaagtgaggtgccatcttggattccatccgtcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatattcacggaggtcatgtgggtattacact-----ggatgacaTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412043 427 + 204787373 caagatgagaggattgc-cgagaccaggagttcga-gaccatcctggttaacatagtgatac-tccccatctctacaaaactaaaaat-gaaaaaagtaaggggaggaatcatgtgttttctcggtctgggtggagaacttttcaaaaccagagtgccaactttctat---ttg--ttttttatg--------tt--ttttt-------ccatcattgtcatggtggttg-ttgactgttatggtgctagcgggactaccatttagcatggaaattagattataacgaagttagaggtcaagtgagctgccctcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcatggaggtcatgtgggcattacact-----ggacgacaCCTT i rheMac8.chr2 I 11 C 0 s macFas5.chr2 18762 426 + 192460366 -aagatgagaggattgc-cgagaccaggagttcga-gaccatcctggttaacatagtgatac-tccccatctctacaaaactaaaaat-gaaaaaagtaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaactttctat---ttg--ttttttatg--------tt--ttttt-------ccatcattgtcatggtggttg-ttgactgttatggtgctagcgggactaccatttagcatggaaattagattataacgaagttagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggtcatgtgggcattacact-----ggacgacaTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 494609 427 + 19675229 caagatgagaggattgc-cgagaccaggagttcga-gaccatcctggttaacatagtgatac-tccccatctctacaaaactaaaaat-gaaaaaagtaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaactttctat---ttg--ttttttatg--------tt--ttttt-------ccatcattgtcatggtggttg-ttgactgttatggtgctagcgggactaccatttagcatggaaattagattataacgaagttagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcatggaggtcatgtgggcattacact-----ggacgacaTCTT i macNem1.NW_012014355v1 I 11 C 0 s cerAty1.NW_012004056v1 429115 430 + 16847902 caagatgagaggattgc-cgagaccaggagttcga-gaccatcctggttaacatagtgatac-tccccgtctctacaaaaacaaaaat-GAAaaaagcaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaacttcctatttgttg--ttttttttt--------tt--ttttt-------taatcattgtcatggtagttg-ttgactgttacagtgctagcgggactgttatttagcatggaaattagattataatgaagttaaaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgattaccag----ggagaagttcggacctcaggtatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggtcatgtgggcattacact-----ggatgacaTCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368303 429 - 91754291 caagatgagaggattgc-cgagaccaggagttcga-gaccgtcctggttaacatggtgatac-tccccatctctacaaaaCTAAAAAT-GAAaagagcaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaacttcctat---ttg--ttttttatg--------ttttttttc-------ccatcattgtcatggtagttg-ttgactgttatggtgctagcgggactgctatttagcatggaaattagattataaggaagctagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggttatgtgggcattacact-----ggatgacaTCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 521743 429 - 1977891 caagatgagaggattgc-cgagaccaggagttcga-gaccatcctggttaacatagtgatac-tccccgtctctacaaaaacaaaaat-GAAaaaagcaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaacttcctat---ttg--ttttttgtt--------tttgttttt-------taatcattgtcatggtggttg-ttgactgttacagtgttagtgggactgtcatttagcatggacattagattataatgaagttaaaggtcaagtgagctgccatcttggagtccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggtatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaagtcatgtgggcattacact-----ggatgacaTCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 403781 423 + 7796314 ------gagaggattgc-cgagaccaggagttcga-ggccatcctggttaacatagtgatac-tccccatctctacaaaaacaaaaat-GAAaaacgcaaggggagaaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaacttcctat---ttg--ttttttatg--------ttttttttt-------ccatcattgtcatggtggttg-ttgactgttacggtgctagcgggactgccatttagcatggagattagattataatgaagttagaggtcaagcgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggtcatgtgggccttacact-----ggatgacaaCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 879818 419 - 74750902 caagatgagaggattgcttgagaccaggagttcga-gaccagcctggtcaacgtaatgagac--cctcatctctacaaaaataaaaat-AAaaaaagcaaagggaggaat--tgtgttttctgggtctgggtggagaagttttccaaacc-gagtgccactttcctat---ctg-tttttttatg--------tt--ttttt---ccccccagcattgtcacggtgcttg-attactgttatggtgccagtggaagtgtgatttagcatggaaattagattataatgaagttagaggtcaggtgagctgccatcttggattccaccagtcttagctggtttgatcaccagctaaggagaggttctgacctcaggcatcctgtttcctaa-------------------agggtagatattcaccaaggtcatgtaggcattacattacacgggataacaTCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418161 436 + 17725628 caagatgagaggattgcttgagaccaggagttcga-gaccagcctggtcaacataatgagac--cctcatctctacaaacataaaaataaaaaaaagcaaagggaggaat--tgtgttttctgggtctgggtggagaagttttcaaaaccagagtgccaccttcctgt---ttgttttttttatg--------tt--tttgc---ccccccagcattgtcatggtggttg-attactgttgtggtgctagtggaagtgtgatttagcatggaaattagattataatgaagttagaggtcaagtgagccaccatcttggattccaccagtcttagctggtttgatcaccagctaaggagaagttctgacctcaggcattccgtttcctaaagataaacagagttcgggcagggtagatattcgccgaggtcacgtaggcattacact-----ggataacaTCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377326 434 - 6778120 caggatgagaggattgcttgagaccagcagttcga-gaccagcatggtcaacataatgagac--cctcatctctacaaaaataaaaat-AAaaaaagcaaagggaggaat--tgtgttttctgggtctgggtggaaacgttttcaaagccagagtgccaccttcctat---ttg-tttttttctg--------tt--tttgc---ccccctagcattgtcatggtggctg-attgctgttacggtgccagtggcagtgtgatttagcatggaaattagattataacgaagttagaggtcaagtgagccgccatcttggattccaacagtcttggctggcttcatcaccagctaaggagaagttctgatctcaggcatcctgtttcctaaagataaacagagttctggcagggtagatattcaccgaggtcatgtaggcattacact-----ggataacaTCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 33588 440 - 69927 caagatgagagggttgcttgagaccaggagtccga-gaccagcctggtcaacataatgagac--cctcacctctacaaaaataaaaat-AAaaaaagcaaagggaggaat--tgtg-tttctgggtctgggtggagacgttttcaaaaccagagtgccaccttcctat---ctg-tgtttttatg--------tt--ttgccccaccccccaacattgtcacggtggttg-attactgttatcgtgctagtggaagtgtgatttggcatggaagttagattataatgaagttagaggtcaagtgagccgccatcttggattccacaggtcttagctggtttgatcacctgctaaggagaagttctgacctcaggcatcctgtttcctaaagat-aacagagttcgggtggggtagatattcactgaggtcgtgtaggcattacattacactggataacaCCTT i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 383957 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037626 1 + 31377067 I a score=38704.000000 s hg38.chr3_KI270779v1_alt 80420 3 + 205312 GGC s panTro5.chr3 200065973 3 + 202621043 GGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46830 3 + 190779 GGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8812 3 + 106623 GGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820843 3 + 123690457 GGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412470 3 + 204787373 GGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19188 3 + 192460366 GGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495036 3 + 19675229 GGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429545 3 + 16847902 GGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368732 3 - 91754291 GGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522172 3 - 1977891 GGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404204 3 + 7796314 GGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880237 3 - 74750902 GGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418597 3 + 17725628 GGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377760 3 - 6778120 GGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34028 3 - 69927 AGC i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29037627 3 + 31377067 GGC i canFam3.chr33 I 1 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 383957 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I a score=2633257.000000 s hg38.chr3_KI270779v1_alt 80423 249 + 205312 TTCAGCCCTGATCTGTTCAGAGCCCTCAGCACGGTACTGGAGGAGAGGCCTTGGGCCGCATCGTGGCATA-TTGTG-GCTTTGGGGAGAAagaaaagcag-atagtgcaatggaaagagcgtggacttgagagtca----gacttgacttcaactcctagctctaccacttaccacctaggtgacctcaa--g--ccactttctcagcctttctgagactctgtatcctcatgtgtatcctagagtttgtctgatagggc s panTro5.chr3 200065976 249 + 202621043 TTCAGCCCTGATCTGTTCAGAGCCCTCAGCACGGTGCTGGAGGAGAGGCCTTGGGCCACATCGTGGCATA-TTGTG-GCTTTGGGGAGAAagaaaagcag-atactgcaatggaaagagcgtgcacttgagagtca----tacatgacttcaactcctagctctaccacttaccacctaggtgacctcaa--g--ccactttctcagcctttctgagactctgtttcctcatgtgtatcctagagtttctctgatagggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 46833 249 + 190779 TTCAGCCCTGATCTGTTCAGAGCCCTCAGCACGGTGCTGGAGGAGAGGCCTTGGGCCGCATCGTGGCATA-TTGTG-GCTTTGGGGAGAAagaaaagcag-atactgcaatggaaagagcgtgcacttgagagtca----tacgtgacttcaactcctagctctaccacttaccacctaggtgaccttaa--g--ccactttctcagcctttctgagactctgtttcctcatgtgtatcctagagtttctctgatagagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 8815 251 + 106623 TTCAGCCCTGATCTGTTCAGAGCCCTCAGCATGGTACTGGAGGAGAGGCCTTGGGCCGCATCGTGGCATATTTGTG-GCTTTGGGGAGAAagaaaagcag-atactgcaatggaaagagcgtggac-tgagagtca----tacgtgacttcaactcctagctctaccacttaccacctaggtgacctcaaagg--ccactttctcagcctttctgagactctgtttcctcatgtgtatcctagagtttgtctgatagggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120820846 249 + 123690457 TTCAGCCCTGATCTGTTCCGAGCCCTCAGCACAGTACTGGAGGAGAGGCCTTGGGCTGCATTGTGGCATA-TTGTG-GCTTTGGGGAGAAagaaaagcag-atagtgcaatgaaaagagcgtgggcttcagagtca----gacttgacttcaactcctagctctaccacttaccacctaggtgacctcaa--g--ccactttctcagcctttctgagcctctgtttcctcatatgtatcctagagtttgtctgatagggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412473 248 + 204787373 TTTAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGA-GCCCTGAGCCACATCATGACATA-TTGTG-GCTTTGGGCAGAAagaaaagcgg-atagtgcaatggaaagagcatgggcttgagagtca----gacttgacttcaactcctagctccaccacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcctccatttcctcatgtgtgtcctagagcttgtctgatagggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19191 248 + 192460366 TTTAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGA-GCCCTGAGCCACATCATGGCATA-TTGTG-GCTTTGGGCAGAAagaaaagcgg-atagtgcaatggaaagagcatgggcttgagagtca----gacttgacttcaactcctagctccaccacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcctccatttcctcatgtgtgtcctagagcttgtctgatagggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495039 248 + 19675229 TTTAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGA-GCCCTGAGCCACATCATGGCATA-TTGTG-GCTTTGGGCAGAAagaaaagcgg-atagtgcaatggaaagagcatgggcttgagagtca----gacttgacttcaactcctagctccaccacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcctccatttcctcatgtgtgtcctagagcttgtctgatagggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429548 248 + 16847902 TTCAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGA-GCCCTGGGCTGCATCATGGCATA-CTGTG-GCTTTGGGCAGAAagaaaagcag-atagtacgatggaaagagcatgggcttgagagtca----gacttgacttcaactcctagctctactacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcctccatttcctcatgtgtatcctagagcttgtctgatagggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368735 248 - 91754291 TTCAGTCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGGGA-GCCCTGGGCTGCATCGTGGCATA-TTGTG-GCTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagcatgggcttgagagtca----gacttgacttcaattcctagctctaccacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcctccatttcctcatgtgtatcctagagcttgtctgatagggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522175 248 - 1977891 TTCAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGA-GCCCTGGGCTGCATCATGGCATA-CTGTG-GCTTTGGGCAGAAagaaaagcag-atagtgcgatggaaagagcatgggcttgagagtca----gacttgacttcaactcctagctctactacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcctccatttcctcatgtgtatcctagagcttgtctgatagggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404207 248 + 7796314 TTCAGCCCTCATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGACA-GCCCTGGGCCGCATCATGGCATA-TTGTG-GCTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagcatgggcttgagagtca----gacttgacttcaactcctagctctaccacttaccacctaggtgacctcaa--g--ccactttctcagtctttctgagcatccatttcctcatgtgtatcctagagcttgtctgatagggc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880240 249 - 74750902 CTCAA----GATCTGTCCAGAGCCCTCTGCCCAGCACTGGAGGAGAGGCCTTGGCCCACATCCTGGCATA-TTATG-ACTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagggtgggcttgatagtcagatggacttgagttcaactcctagctctaccgcttactgcctgggtgacctcaa--g--ccactttctcagcctttctgagcctcagtttcctcatgtgtctcctagagcttgcctgatagggg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418600 247 + 17725628 TTCAG----G--CTGTCCAGAGCCCTCTGCCCAGCACTGGAGGAGAGGCCTTGGCCCACTTCCTGGCATA-TTATG-GCTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagagtgggcttgatagtcagatggatttgagttcaactcctagctctaccacttactgcctgggtgacctcaa--g--ccactttctcagcctttctgagcctcagtttcctcatgtgtatcctagagcttgcctgatagggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 377763 249 - 6778120 TTCAA----GAGCTGTCCAGAGCCCTCTGCCCAGCACTGGAGGAGAGGCCTTGGCCCGCATCCTGGCATA-TTATG-GCTTTGGGCAGAAagaaaagcag-ataatgcaatggaaagagagtgcgattgatagtcagatagacttgagttcaactcccggctctaccacttactgcctgggtgacctcaa--g--ccactttctcagcctttctgagcctcagtttcctcatgtgtatcctagagcttgcctgatagggc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34031 249 - 69927 TTCAA----GATCTGTTCAGAGCCCTCTGCCCAGCACTGGAGGAGAGGCCTTGGCCCGCATCCTGGCATA-TTATG-GCTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagagtgggcttgatagtcagatggacttgagttcagctcctagctctaccacgtactgcctgggtgacctcaa--g--ccactttctcagcctttctgagcctcagtttcctcatgtgtatcctagagcttgcctgatagggc i aotNan1.NW_018503669v1 C 0 I 122 s otoGar3.GL873829 383957 250 - 608964 TCCAGTCCTGACCTGTCCAGGATCCTCACCCCAGCACTGGAGGAGAGGCTTCGCCCCCTCTGCTAGCATA-TTGCA-GCTTTGGGCAGAAagaaaagcagcacagtgcaatgggaacagtgtggtttggtcaaata----gacctggcttcaattctgggctccacctcttactacctgggtgaccctga--g--aaaatactctagtttttttgagcctcagcttccacatctgtattctagaacttgccttgtagggc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29037630 240 + 31377067 TTCAGCCCTGGCTTGTCCAGAGCTCTCTGCCCGGCACTGGAACGGAGGCCTCAGCCTCCACTT-----TA-TTGTGAACATGGGGCAGAAagaaaggcaacgtgggacaatggaaggagcatggacttgggagccg-aaagttctgggtccagatcccacctctaccacgtgttacctggaggaactgac--gtacctccttctc-----------gcttccctttccccatctgtgtcctagagcttgccttgcagagc i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I a score=7279.000000 s hg38.chr3_KI270779v1_alt 80672 1 + 205312 t s panTro5.chr3 200066225 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47082 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9066 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821095 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412721 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19439 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495287 1 + 19675229 t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429796 1 + 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368983 1 - 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522423 1 - 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404455 1 + 7796314 t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880489 1 - 74750902 c i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418847 1 + 17725628 c i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378012 1 - 6778120 c i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 384207 1 - 608964 t i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29037870 1 + 31377067 t i canFam3.chr33 C 0 I 32 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e aotNan1.NW_018503669v1 34280 122 - 69927 I a score=5118.000000 s hg38.chr3_KI270779v1_alt 80673 1 + 205312 a s panTro5.chr3 200066226 1 + 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47083 1 + 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9067 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821096 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412722 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19440 1 + 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495288 1 + 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429797 1 + 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368984 1 - 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522424 1 - 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404456 1 + 7796314 g i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880490 1 - 74750902 a i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418848 1 + 17725628 a i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378013 1 - 6778120 a i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 384208 1 - 608964 g i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I a score=26447.000000 s hg38.chr3_KI270779v1_alt 80674 3 + 205312 tag s panTro5.chr3 200066227 3 + 202621043 tag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47084 3 + 190779 tag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9068 3 + 106623 tag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821097 3 + 123690457 tag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412723 3 + 204787373 cag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19441 3 + 192460366 cag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495289 3 + 19675229 tag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429798 3 + 16847902 tag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368985 3 - 91754291 tag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522425 3 - 1977891 tag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404457 3 + 7796314 tag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880491 3 - 74750902 tag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418849 3 + 17725628 tag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378014 3 - 6778120 tag i cebCap1.NW_016107444v1 C 0 I 65 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I a score=57272.000000 s hg38.chr3_KI270779v1_alt 80677 9 + 205312 tgagaatta s panTro5.chr3 200066230 9 + 202621043 tgagaatta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47087 9 + 190779 tgagaatta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9071 9 + 106623 tgagaatta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821100 9 + 123690457 tgagaatta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412726 9 + 204787373 tgagactta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19444 9 + 192460366 tgagactta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495292 9 + 19675229 tgagactta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429801 9 + 16847902 tgagaatta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368988 9 - 91754291 tgagactta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522428 9 - 1977891 tgagaatta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404460 9 + 7796314 tgagaatta i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880494 9 - 74750902 ggaggattg i calJac3.chr17 C 0 I 7 s saiBol1.JH378146 418852 9 + 17725628 ggaggattg i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I a score=38193.000000 s hg38.chr3_KI270779v1_alt 80686 6 + 205312 attgaa s panTro5.chr3 200066239 6 + 202621043 gttgaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47096 6 + 190779 gttgaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9080 6 + 106623 gttgaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821109 6 + 123690457 attgaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412735 6 + 204787373 attgaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19453 6 + 192460366 attgaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495301 6 + 19675229 attgaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429810 6 + 16847902 attgaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 368997 6 - 91754291 attgaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522437 6 - 1977891 attgaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404469 6 + 7796314 attgaa i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 418861 6 + 17725628 attgag i saiBol1.JH378146 C 0 I 1 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e calJac3.chr17 880503 7 - 74750902 I a score=145271.000000 s hg38.chr3_KI270779v1_alt 80692 25 + 205312 ttaaGTATAGTGAGAATTAAGCCAG s panTro5.chr3 200066245 25 + 202621043 ttaaGTATAGTGAGAATTAAGCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47102 25 + 190779 ttaagtatagtgagaattaagccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9086 25 + 106623 ttaaGTAGAGTGAGAATTAAGCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821115 25 + 123690457 ttaaGTATAGTGAGAATTAAGCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412741 25 + 204787373 ttaaGTATAGTGAGAATTAAGCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19459 25 + 192460366 ttaaGTATAGTGAGAATTAAGCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495307 25 + 19675229 ttaaGTATAGTGAGAATTAAGCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 429816 25 + 16847902 ttaagtatagtaaGAATTAAGCCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369003 25 - 91754291 ttaaGTATAGTGAGAATTAAGCCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522443 25 - 1977891 ttaagtatagtaaGAATTAAGCCAA i manLeu1.NW_012102020v1 C 0 I 21 s colAng1.NW_012118932v1 404475 25 + 7796314 ttaaGTATAGTGAGAATTAAGCCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880510 14 - 74750902 tcaggcatagagag----------- i calJac3.chr17 I 7 C 0 s saiBol1.JH378146 418868 14 + 17725628 tcaggcatggagag----------- i saiBol1.JH378146 I 1 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I a score=10505.000000 s hg38.chr3_KI270779v1_alt 80717 2 + 205312 GT s panTro5.chr3 200066270 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47127 2 + 190779 gt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9111 2 + 106623 GT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821140 2 + 123690457 GT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412766 2 + 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19484 2 + 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 495332 2 + 19675229 GT i macNem1.NW_012014355v1 C 0 M 1502 s cerAty1.NW_012004056v1 429841 2 + 16847902 GT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369028 2 - 91754291 GT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 404500 2 + 7796314 GT i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e calJac3.chr17 880524 0 - 74750902 C e saiBol1.JH378146 418882 0 + 17725628 C e manLeu1.NW_012102020v1 522468 21 - 1977891 I a score=22480.000000 s hg38.chr3_KI270779v1_alt 80719 9 + 205312 CTGGAGAGG s panTro5.chr3 200066272 9 + 202621043 CTGGAGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47129 9 + 190779 ctggAGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9113 9 + 106623 CTGGAGAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821142 9 + 123690457 CTGGAGAGG i nomLeu3.chr11 C 0 T 28 s rheMac8.chr2 202412768 9 + 204787373 ATGGAGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19486 9 + 192460366 ATGGAGAGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429843 9 + 16847902 ATGGAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369030 9 - 91754291 ATGGAGAGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 404502 9 + 7796314 ATGGAGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880524 2 - 74750902 --gg----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418882 2 + 17725628 --gg----- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e manLeu1.NW_012102020v1 522468 21 - 1977891 I a score=16005.000000 s hg38.chr3_KI270779v1_alt 80728 3 + 205312 CCT s panTro5.chr3 200066281 3 + 202621043 CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47138 3 + 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9122 3 + 106623 CCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202412777 3 + 204787373 CCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19495 3 + 192460366 CCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429852 3 + 16847902 CCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369039 3 - 91754291 CCT i chlSab2.chr15 C 0 I 18 s colAng1.NW_012118932v1 404511 3 + 7796314 CCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880526 3 - 74750902 cct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418884 3 + 17725628 cct i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e manLeu1.NW_012102020v1 522468 21 - 1977891 I e nomLeu3.chr11 120821151 28 + 123690457 T a score=4212.000000 s hg38.chr3_KI270779v1_alt 80731 8 + 205312 GGCTACT-G s panTro5.chr3 200066284 8 + 202621043 GGCTACT-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47141 8 + 190779 GGCTACT-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9125 8 + 106623 GGCTACT-G i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202412780 7 + 204787373 AGGTCCT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19498 7 + 192460366 AGGTCCT-- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429855 7 + 16847902 AGGTCCT-- i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 404514 8 + 7796314 AGGTCCTG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880529 8 - 74750902 ggcTCCT-G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418887 8 + 17725628 ggcTCCT-G i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e manLeu1.NW_012102020v1 522468 21 - 1977891 I e chlSab2.chr15 369042 18 - 91754291 I e nomLeu3.chr11 120821151 28 + 123690457 T a score=13865.000000 s hg38.chr3_KI270779v1_alt 80739 3 + 205312 GTG s panTro5.chr3 200066292 3 + 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47149 3 + 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9133 3 + 106623 GTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202412787 3 + 204787373 GTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19505 3 + 192460366 GTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429862 3 + 16847902 GTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522489 3 - 1977891 GTG i manLeu1.NW_012102020v1 I 21 C 0 s colAng1.NW_012118932v1 404522 3 + 7796314 GTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880537 3 - 74750902 GTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418895 3 + 17725628 GTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e chlSab2.chr15 369042 18 - 91754291 I e nomLeu3.chr11 120821151 28 + 123690457 T a score=49104.000000 s hg38.chr3_KI270779v1_alt 80742 15 + 205312 --------------AGTGAGGTAACTGAG s panTro5.chr3 200066295 15 + 202621043 --------------AGTGAGGTAACTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47152 15 + 190779 --------------AGTGAGGTAACTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9136 15 + 106623 --------------AGTGAGTTAATTGAG i gorGor5.CYUI01000576v1 C 0 I 68625 s nomLeu3.chr11 120821123 13 + 123690457 --------------AGTGAG--AATTAAG i nomLeu3.chr11 T 28 C 0 s rheMac8.chr2 202412790 15 + 204787373 --------------AGTGAATTAATTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19508 15 + 192460366 --------------AGTGAATTAATTGAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429865 15 + 16847902 --------------AGTGAATTAATTGAG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522492 15 - 1977891 --------------AGTGAATTAATTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404525 15 + 7796314 --------------AGTGAATTAATTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880540 29 - 74750902 AGTGGCCCCACGAGGGAGGATTGATTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 418898 29 + 17725628 AGTGTCCCCACGAGGGAGGATTGATAGGG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e chlSab2.chr15 369042 18 - 91754291 I a score=144309.000000 s hg38.chr3_KI270779v1_alt 80757 34 + 205312 ATCAGGTATGGAG-AGGACTGGCTCCTGGTGAGTG s panTro5.chr3 200066310 34 + 202621043 ATCAGGTATGGAG-AGGCCTGGCTCCTGGTGAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47167 34 + 190779 ATCAGGTATGGAG-AGGCCTGGCTCCTGGTGAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77776 34 + 106623 ATCCATTATGGAG-GGACCTGTCTCCTGGTGACTG i gorGor5.CYUI01000576v1 I 68625 C 0 s nomLeu3.chr11 120821136 33 + 123690457 -CCAGGTCTGGAG-AGGCCTGGCTCCTGGTGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412805 34 + 204787373 ATCAGGTAGGGAG-GGACGTGGCTCCTGGTCAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19523 34 + 192460366 ATCAGGTAGGGAG-GGACGTGGCTCCTGGTCAGTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429880 34 + 16847902 ATCAGGTGGGGAG-GGACGTGGCTCCTGGTGAGTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522507 34 - 1977891 ATCACGTGGGGAG-GGACGTGGCTCCTGGTGAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404540 33 + 7796314 ATCAGGTGGGGAG-GGGCATGGCTCCT-GTGAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880569 35 - 74750902 GTCAGGCGTGGAGAGGGCCTGGCTCCTGGTGAGTG i calJac3.chr17 C 0 I 14 s saiBol1.JH378146 418927 35 + 17725628 ATCAGGCGTGGAGGGGGCCTGGCTCCTAGTGAGTG i saiBol1.JH378146 C 0 I 122 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e chlSab2.chr15 369042 18 - 91754291 I a score=269321.000000 s hg38.chr3_KI270779v1_alt 80791 83 + 205312 AGTTAATTGAGATGAGGTATGGAG-GGACCTGTCTCCTGGTGACT--------------GAGTTAATTGAGATGAGGTGTGGAG-GGACCTGGCTCCTG s panTro5.chr3 200066344 83 + 202621043 AGTTAATTGAGATCCATTATGGAG-GGACCTGTCTCCTGGTGAGT--------------GAGTTAATTGAGATCCGGTATGGAG-GGACCTGGATCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47201 83 + 190779 AGTTAATTGAGATCCATTATGGAG-GGACCTGTCTCCTGGTGAGT--------------GAGTTAATTGAGATCAGGTATGGAG-GGACCTGGCTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77810 83 + 106623 AGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGTGAAT--------------GAGTTAATTGAGACCCGGTGTGGAG-GGACGTGGCTCCTG i gorGor5.CYUI01000576v1 C 0 T 45 s nomLeu3.chr11 120821169 83 + 123690457 AGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGTAAGT--------------GAATAAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412839 81 + 204787373 AATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCT-GTGGGT--------------GAATTAATTGAGATCAGGTGGCGAG-GGACGTGGCTCCT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19557 81 + 192460366 AATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCT-GTGGGT--------------GAATTAATTGAGATCAGGTGGCGAG-GGACGTGGCTCCT- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429914 80 + 16847902 AATT-ATTGAGATCAGGTGGGGAG-GGACGTGGCTCCT-GTGAGT--------------GAATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCT- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522541 80 - 1977891 AATT-ATTGAGATCAGGTGGGCAG-GGACGTGGCTCCT-GTCAGT--------------GAATTAATTGAGATCAGGTAGGGAG-GCACGCGGCTCCT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404573 81 + 7796314 AATTAATTGAGATCAGGTGGGGAG-GGGCGTGGCTCCT-GTGAGT--------------GAATTAATTGAGATCAGGTGGGGAG-GGGCGTGGCTCCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880618 99 - 74750902 GATTGATTGAGGTCAGGCGTGGAGAGGGCCTGGCTCCTGGTGAGTGGCCCCACAAGGGAGGATTGATTGAGGTCAGGCGTGGAGAGGGCCTGGCTCCTG i calJac3.chr17 I 14 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e chlSab2.chr15 369042 18 - 91754291 I a score=75750.000000 s hg38.chr3_KI270779v1_alt 80874 19 + 205312 --------------GTGAGTGAGTTAATTGAGA s panTro5.chr3 200066427 19 + 202621043 --------------GTGAGTGAGTTAATTGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47284 19 + 190779 --------------GTGAGTGAGTTAATTGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77848 19 + 106623 --------------GTGAATGAGTTAATTGAGA i gorGor5.CYUI01000576v1 T 45 C 0 s nomLeu3.chr11 120821252 19 + 123690457 --------------GGGAGTGAGTTAATTGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412920 19 + 204787373 --------------GTGGGTGAATTAATTGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19638 19 + 192460366 --------------GTGGGTGAATTAATTGAGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 429994 19 + 16847902 --------------GTGAATGAATTAATTGAGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522621 19 - 1977891 --------------GTGAATGAATTAATTGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404654 19 + 7796314 --------------GTGAGTGAATTAATTGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880717 33 - 74750902 GTGAGCGGCCCCACGAGGGAGGATTGATTGAGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e chlSab2.chr15 369042 18 - 91754291 I a score=5289.000000 s hg38.chr3_KI270779v1_alt 80893 3 + 205312 TCC s panTro5.chr3 200066446 3 + 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47303 3 + 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01000576v1 77867 3 + 106623 CCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821271 3 + 123690457 TGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412939 3 + 204787373 TCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19657 3 + 192460366 TCA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430013 3 + 16847902 TCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522640 3 - 1977891 TCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880750 3 - 74750902 TCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=57233.000000 s hg38.chr3_KI270779v1_alt 80896 23 + 205312 ATT-AGGGAG-GGACCTGGCTCCTG s panTro5.chr3 200066449 23 + 202621043 GGT-ATGGAG-GGACCTGGCTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47216 23 + 190779 ATT-ATGGAG-GGACCTGTCTCCTG i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01000576v1 77870 23 + 106623 GGT-GTGGAG-GGACGTGGCTCCTG i gorGor5.CYUI01000576v1 C 0 T 90 s nomLeu3.chr11 120821274 23 + 123690457 GGT-ATGGAG-GGACCTGGCTTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202412942 23 + 204787373 GGT-AGGGTG-AGACGTGGCTCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19660 23 + 192460366 GGT-AGGGAG-AGACGTGGCTCCTA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430016 23 + 16847902 GGTGAGGGAG-GGACGTGGCTCCT- i cerAty1.NW_012004056v1 C 0 I 1 s manLeu1.NW_012102020v1 522643 23 - 1977891 GGT-GGGGAG-GGACATGGCTCCTG i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 880753 24 - 74750902 GAC-GTGGAGAGGGCCTGGCTCCTG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=1500.000000 s hg38.chr3_KI270779v1_alt 80919 1 + 205312 G s panTro5.chr3 200066472 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47239 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77803 1 + 106623 G i gorGor5.CYUI01000576v1 T 90 C 0 s nomLeu3.chr11 120821297 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 880777 1 - 74750902 G i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e manLeu1.NW_012102020v1 522666 1 - 1977891 I e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430039 1 + 16847902 I e macFas5.chr2 19683 0 + 192460366 C e rheMac8.chr2 202412965 0 + 204787373 C a score=9720.000000 s hg38.chr3_KI270779v1_alt 80920 5 + 205312 CGAGT s panTro5.chr3 200066473 5 + 202621043 TAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47240 5 + 190779 TGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77804 5 + 106623 TGACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821298 5 + 123690457 TGAGT i nomLeu3.chr11 C 0 T 175 s rheMac8.chr2 202412965 5 + 204787373 TGGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19683 5 + 192460366 TGGGT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430040 5 + 16847902 TGAAT i cerAty1.NW_012004056v1 I 1 C 0 s manLeu1.NW_012102020v1 522667 4 - 1977891 -CAGT i manLeu1.NW_012102020v1 I 1 C 0 s calJac3.chr17 880778 5 - 74750902 TGACT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=4500.000000 s hg38.chr3_KI270779v1_alt 80925 1 + 205312 G s panTro5.chr3 200066478 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47245 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77809 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821128 1 + 123690457 G i nomLeu3.chr11 T 175 C 0 s rheMac8.chr2 202412970 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19688 1 + 192460366 G i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430045 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522671 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880783 1 - 74750902 G i calJac3.chr17 C 0 T 281 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=95082.000000 s hg38.chr3_KI270779v1_alt 80926 49 + 205312 AGTTAATTGACACCCGGTATGGAGGGACCTGGCTCCTGGCGAGTGATTT s panTro5.chr3 200066479 49 + 202621043 AGTTAACTGATATCCATTATGGAGGGACCTGGCTCCTGGTGAGTGAGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47246 49 + 190779 AGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77810 49 + 106623 AGTTAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAATGAGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821129 44 + 123690457 AATTAA-----GCCAGGTCTGGAGAGGCCTGGCTCCTGGTGAGTGAGTT i nomLeu3.chr11 C 0 T 44 s rheMac8.chr2 202412971 44 + 204787373 AATTAATTGAGATCAGGTGGCGAGGGACGTGGCTCCT-----GTGAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19689 48 + 192460366 AATTAATTGAGATCAGGTGGCGAGGGACGTGGCTCCT-GTGGGTGAATT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430046 48 + 16847902 AATTAATTGAGATCAGGTGGGGAGGGACGCGGCTCCT-GTGAATGAATT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522672 47 - 1977891 AATT-ATTGAGATCAGGTGGGGAGGGGCGTGGCTCCT-GTCAGTGAATT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=23223.000000 s hg38.chr3_KI270779v1_alt 80975 11 + 205312 AATTGAGACCC s panTro5.chr3 200066528 11 + 202621043 AATTGAGATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47295 11 + 190779 AATTGAGATCC i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01000576v1 77859 11 + 106623 AATTGAGACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821129 10 + 123690457 AATTAAGCCA- i nomLeu3.chr11 T 44 C 0 s rheMac8.chr2 202413015 11 + 204787373 AATTGAGATCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19737 11 + 192460366 AATTGAGATCA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430094 11 + 16847902 AATTGAGATCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522719 11 - 1977891 AATTGAGATCA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=48670.000000 s hg38.chr3_KI270779v1_alt 80986 23 + 205312 GGTGTGGAGGGACTTGGCTCCTG s panTro5.chr3 200066539 23 + 202621043 GGTATGGAGGGACCTGGCTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47171 23 + 190779 GGTATGGAGAGGCCTGGCTCCTG i panPan2.chrUn_NW_014024201v1 T 135 C 0 s gorGor5.CYUI01000576v1 77870 23 + 106623 GGTGTGGAGGGACGTGGCTCCTG i gorGor5.CYUI01000576v1 C 0 T 159 s nomLeu3.chr11 120821139 23 + 123690457 GGTCTGGAGAGGCCTGGCTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413026 22 + 204787373 GGTGGGGAGAGACGTGGCTCCT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19748 22 + 192460366 GGTAGGGAGAGACGTGGCTCCT- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430105 22 + 16847902 GGTGGGGAGGGACGCGGCTCCT- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522730 22 - 1977891 GGTAGGGAGGCACGCGGCTCCT- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=42997.000000 s hg38.chr3_KI270779v1_alt 81009 21 + 205312 GTGAGTGAGTGAATTGAGATG s panTro5.chr3 200066562 21 + 202621043 GGGAGTGAGTTAACTGAGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47194 21 + 190779 GTGAGTGAGTTAATTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 T 45 s nomLeu3.chr11 120821162 21 + 123690457 GTGAGTGAGTTAATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413048 21 + 204787373 GTGGGTGAATTAATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19770 21 + 192460366 ATGGGTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430127 21 + 16847902 GTGAATGAATTAATTGAGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522752 21 - 1977891 GTGAATGAATTAATTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e gorGor5.CYUI01000576v1 77893 159 + 106623 T a score=94710.000000 s hg38.chr3_KI270779v1_alt 81030 60 + 205312 AGGTATGGAGGGACCTGTCTCCTGGTGAGTGAGTTAATTGAGATGAGGTGTGGAGGGACC s panTro5.chr3 200066583 60 + 202621043 CCTTATGGAGGGACCTGGCTCCTGGTGACTGAGTTAATTGAGATGAGGTGTGGAGGGACC i panTro5.chr3 C 0 T 360 s panPan2.chrUn_NW_014024201v1 47170 60 + 190779 AGGTATGGAGAGGCCTGGCTCCTGGTGAGTGAGTTAATTGAGATCCATTATGGAGGGACC i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000576v1 77734 60 + 106623 AGGTCTGGAGAGGCCTGGCTACTGGTGAGTGAGTTAATTGAGATCCATTATGGAGGGACC i gorGor5.CYUI01000576v1 T 159 C 0 s nomLeu3.chr11 120821183 60 + 123690457 AGGTATGGAGGGACCTGGCTCCTGGTAAGTGAATAAATTGAGATGAGGTATGGAGGGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413069 15 + 204787373 AGGTGG---------------------------------------------GGAGGGACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19791 60 + 192460366 AGGTGGGGAGGGATGTGGCTCCTGGTGAGTGAATTAATTGAGATCAGGTAAGGAGAGACG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430148 59 + 16847902 AGGTGCGGAGGGACGTGGCTCCTGGTGAGTGAATT-ATTGAGATCAGGTGGGGAGGGACG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522773 58 - 1977891 AGGTGGGAAGGGACGTGGCTCCT-GTCAGTGAATT-ATTGAGATCAGGTGGGGAGGGACG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=11357.000000 s hg38.chr3_KI270779v1_alt 81090 10 + 205312 TGTCTCCTG--G s panTro5.chr3 200066283 10 + 202621043 TGGCTACTG--G i panTro5.chr3 T 360 C 0 s panPan2.chrUn_NW_014024201v1 47230 10 + 190779 TGTCTCCTG--G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77794 10 + 106623 TGTCTCCTG--G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821243 10 + 123690457 TGGCTCCTG--G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413084 10 + 204787373 TGGCTCCTGG-- i rheMac8.chr2 C 0 T 129 s macFas5.chr2 19851 9 + 192460366 TGGCTCCTG--- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430207 9 + 16847902 TGGCTCCTG--- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522831 10 - 1977891 TGGCTCCTG-G- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=111499.000000 s hg38.chr3_KI270779v1_alt 81100 47 + 205312 TGAGTGAGTTAATTGAGATGAGGTGTGGAGGGACCCGGCTCCTGGTG s panTro5.chr3 200066293 47 + 202621043 TGAGTGAGGTAACTGAGATCAGGTATGGAGAGGCCTGGCTCCTGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47240 47 + 190779 TGAGTGAGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77804 47 + 106623 TGACTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821253 47 + 123690457 GGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTTCTGGTG i nomLeu3.chr11 C 0 T 177 s rheMac8.chr2 202412965 43 + 204787373 TGGGTGAATTAATTGAGATCAGGTGGCGAGGGACGTGGCTCCT---- i rheMac8.chr2 T 129 C 0 s macFas5.chr2 19860 46 + 192460366 TGGGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCTG-GTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430216 47 + 16847902 TGAATGAATTAATTGAGATCAGGTGCGGAGGGACGTGGCTCCTGGTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522841 46 - 1977891 TGAGTGAATT-ATTGAGATCAGGTGGGGAGGGACGTGGCTCCTGGTG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=2548.000000 s hg38.chr3_KI270779v1_alt 81147 1 + 205312 A s panTro5.chr3 200066340 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47287 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77851 1 + 106623 A i gorGor5.CYUI01000576v1 C 0 I 41 s nomLeu3.chr11 120821123 1 + 123690457 A i nomLeu3.chr11 T 177 C 0 s macFas5.chr2 19906 1 + 192460366 A i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430263 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522887 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e rheMac8.chr2 202413008 0 + 204787373 C a score=30828.000000 s hg38.chr3_KI270779v1_alt 81148 18 + 205312 GTGAGTTAATTGAGACTC s panTro5.chr3 200066341 18 + 202621043 GTGAGTTAATTGAGATCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47288 18 + 190779 GTGAGTTAATTGAGATCC i panPan2.chrUn_NW_014024201v1 C 0 T 181 s gorGor5.CYUI01000576v1 77893 18 + 106623 GTGAGTTAATTGAGACCC i gorGor5.CYUI01000576v1 I 41 C 0 s nomLeu3.chr11 120821124 15 + 123690457 GTGAG--AATTAAGCCA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413008 18 + 204787373 GTGAATTAATTGAGATCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19907 18 + 192460366 GTGAATTAATTGAGATCA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430264 17 + 16847902 GTGAATT-ATTGAGATCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522888 17 - 1977891 GTGAATT-ATTGAGATCA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=5661.000000 s hg38.chr3_KI270779v1_alt 81166 4 + 205312 GGTG s panTro5.chr3 200066359 4 + 202621043 ATTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 77911 4 + 106623 GGTG i gorGor5.CYUI01000576v1 C 0 T 181 s nomLeu3.chr11 120821139 4 + 123690457 GGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413026 4 + 204787373 GGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19925 4 + 192460366 GGTA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430281 4 + 16847902 GGTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522905 4 - 1977891 GGTG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47306 181 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=12299.000000 s hg38.chr3_KI270779v1_alt 81170 10 + 205312 TGGAGGGACT s panTro5.chr3 200066363 10 + 202621043 TGGAGGGACC i panTro5.chr3 C 0 I 270 s nomLeu3.chr11 120821143 10 + 123690457 TGGAGAGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413030 10 + 204787373 GGGAGAGACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19929 10 + 192460366 GGGAGAGACG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430285 10 + 16847902 GGGAGGGGCG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522909 10 - 1977891 GGGAGGGACG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47306 181 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e gorGor5.CYUI01000576v1 77915 181 + 106623 T a score=39616.000000 s hg38.chr3_KI270779v1_alt 81180 30 + 205312 TGGCTCCTGGTGAGTGAGTGAATTGAGATG s panTro5.chr3 200066643 30 + 202621043 TGGCTCCTGGTGAGTGAGTTAATTGAGACC i panTro5.chr3 I 270 C 0 s nomLeu3.chr11 120821153 30 + 123690457 TGGCTCCTGGTGAGTGAGTTAATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413040 29 + 204787373 TGGCTCCT-GTGGGTGAATTAATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19939 29 + 192460366 TGGCTCCT-GTGGGTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430295 28 + 16847902 TGGCTCCT-GTCAGTGAATT-ATTGAGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522919 29 - 1977891 TGGCTCCTGGTGAGTGAATT-ATTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47306 181 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e gorGor5.CYUI01000576v1 77915 181 + 106623 T a score=5236.000000 s hg38.chr3_KI270779v1_alt 81210 2 + 205312 AG s panTro5.chr3 200066673 2 + 202621043 CG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47125 2 + 190779 ag i panPan2.chrUn_NW_014024201v1 T 181 C 0 s gorGor5.CYUI01000576v1 77734 2 + 106623 AG i gorGor5.CYUI01000576v1 T 181 C 0 s nomLeu3.chr11 120821183 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413069 2 + 204787373 AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19968 2 + 192460366 AG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430323 2 + 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522948 2 - 1977891 AG i manLeu1.NW_012102020v1 C 0 T 482 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=102175.000000 s hg38.chr3_KI270779v1_alt 81212 43 + 205312 GTATGGAGGGACCTGGCTCCTGGTGAGTGAGTGAATTGAGATG s panTro5.chr3 200066675 43 + 202621043 GTATGGAGGGACCTGGATCCTGGTGAGTGAGTTAATTGAGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47127 43 + 190779 gtctggAGAGGCCTGGCTACTGGTGAGTGAGGTAACTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77736 43 + 106623 GTCTGGAGAGGCCTGGCTACTGGTGAGTGAGTTAATTGAGATC i gorGor5.CYUI01000576v1 C 0 T 45 s nomLeu3.chr11 120821185 43 + 123690457 GTATGGAGGGACCTGGCTCCTGGTAAGTGAATAAATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413071 43 + 204787373 GTGGGGAGGGACGTGGCTCCTGGTGAGTGAATTAATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 19970 43 + 192460366 GTAGGGAGGGACGTGGCTCCTGGTGAGTTAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430325 42 + 16847902 GTGCGGAGGGACGTGGCTCCTGGTGAGTGAATT-ATTGAGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522468 42 - 1977891 GTATGGAGAGACCTAGGTCCT-GTGAGTGAATTAATTGAGATC i manLeu1.NW_012102020v1 T 482 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=11952.000000 s hg38.chr3_KI270779v1_alt 81255 4 + 205312 AGGT s panTro5.chr3 200066718 4 + 202621043 AGGT i panTro5.chr3 C 0 T 270 s panPan2.chrUn_NW_014024201v1 47170 4 + 190779 AGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77734 4 + 106623 AGGT i gorGor5.CYUI01000576v1 T 45 C 0 s nomLeu3.chr11 120821228 4 + 123690457 AGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413114 4 + 204787373 AGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20013 4 + 192460366 AGGT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430367 4 + 16847902 AGGT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522510 4 - 1977891 ACGT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=23640.000000 s hg38.chr3_KI270779v1_alt 81259 10 + 205312 GTGGAGGGAC s panTro5.chr3 200066452 10 + 202621043 ATGGAGGGAC i panTro5.chr3 T 270 C 0 s panPan2.chrUn_NW_014024201v1 47174 10 + 190779 ATGGAGAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77738 10 + 106623 CTGGAGAGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821232 10 + 123690457 ATGGAGGGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413118 10 + 204787373 AGGGAGGGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20017 10 + 192460366 AGGGAGGGAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 430371 10 + 16847902 GGGGAGGGAC i cerAty1.NW_012004056v1 C 0 M 1680 s manLeu1.NW_012102020v1 522514 10 - 1977891 GGGGAGGGAC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=50326.000000 s hg38.chr3_KI270779v1_alt 81269 31 + 205312 CTGTCTCCTGGTGAGTGAGTTAATTGAGATG s panTro5.chr3 200066462 31 + 202621043 CTGGCTCCTGGTAAGTGAGTTAACTGATATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47184 31 + 190779 CTGGCTCCTGGTGAGTGAGTTAATTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01000576v1 77748 31 + 106623 CTGGCTACTGGTGAGTGAGTTAATTGAGATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821242 31 + 123690457 CTGGCTCCTGGGGAGTGAGTTAATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413128 30 + 204787373 ATGGCTCCT-GTCAGTGAATTAATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20027 26 + 192460366 GTGGGTCCT-----GTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522524 30 - 1977891 GTGGCTCCTGGTGAGTGAATT-ATTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M a score=40299.000000 s hg38.chr3_KI270779v1_alt 81300 30 + 205312 AGGTATGGAGGGACCTGTCTCCTGGTGAGT s panTro5.chr3 200066493 30 + 202621043 CATTATGGAGGGACCTGGCTCCTGGTGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47125 30 + 190779 aggtctggAGAGGCCTGGCTACTGGTGAGT i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01000576v1 77779 30 + 106623 CATTATGGAGGGACCTGTCTCCTGGTGACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821273 30 + 123690457 AGGTATGGAGGGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 200 s rheMac8.chr2 202413158 29 + 204787373 AGGTAGGGAGGGACGTGGCTCTG-GTGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20053 29 + 192460366 AGGTTGGGAGGGACGTGGGTCCT-GTGGGT i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522554 29 - 1977891 AGGTGGGCAGGGACGTGGCTCCT-GTCAGT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M a score=89566.000000 s hg38.chr3_KI270779v1_alt 81330 65 + 205312 GAGTTAATTGAGATCAGGTATGGAGGGACTTGGCTCCTGGTGAGTGAGTTAATTGAGACTCTGTG s panTro5.chr3 200066523 65 + 202621043 GAGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGGGAGTGAGTTAACTGAGATCCCTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47155 65 + 190779 GAGGTAACTGAGATCAGGTATGGAGAGGCCTGGCTCCTGGTGAGTGAGTTAATTGAGATCCATTA i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01000576v1 77809 65 + 106623 GAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAATGAGTTAATTGAGACCCGGTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202413187 64 + 204787373 GAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCCT-GTCAGTGAATTAATTGAGATCAGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20082 64 + 192460366 GAATTAATTGAGATCAGGTAGGGAGAGACGTGGGTCCT-GTGGGTGAATTAATTGAGATCAGGTG i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522583 64 - 1977891 GAATTAATTGAGATCAGGTAGGGAGGCACGCGGCTCCT-GTGAATGAATTAATTGAGATCAGGTG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M e nomLeu3.chr11 120821303 200 + 123690457 T a score=19881.000000 s hg38.chr3_KI270779v1_alt 81395 19 + 205312 TGGAGGGACCTGGCTCCT-G s panTro5.chr3 200066588 19 + 202621043 TGGAGGGACCTGGCTCCT-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47130 19 + 190779 tggAGAGGCCTGGCTACT-G i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01000576v1 77874 19 + 106623 TGGAGGGACGTGGCTCCT-G i gorGor5.CYUI01000576v1 C 0 T 159 s rheMac8.chr2 202413251 18 + 204787373 GGGAGGGACGTGGGTCCT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20146 19 + 192460366 GGGAGGGACGTGGCTCCTG- i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522647 18 - 1977891 GGGAGGGACATGGCTCCT-- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M e nomLeu3.chr11 120821303 200 + 123690457 T a score=17964.000000 s hg38.chr3_KI270779v1_alt 81414 21 + 205312 GTGAGTGAGTTAATTGAGATG s panTro5.chr3 200066607 21 + 202621043 GTGACTGAGTTAATTGAGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47149 21 + 190779 GTGAGTGAGGTAACTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 T 45 s rheMac8.chr2 202413269 17 + 204787373 ----GTGAATTAATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20165 21 + 192460366 GTGAGTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522665 20 - 1977891 GTCAGTGAATT-ATTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M e nomLeu3.chr11 120821303 200 + 123690457 T e gorGor5.CYUI01000576v1 77893 159 + 106623 T a score=34049.000000 s hg38.chr3_KI270779v1_alt 81435 30 + 205312 AGGTATGGAGGGACCTGGCTCCTGGTGAGT s panTro5.chr3 200066628 30 + 202621043 AGGTGTGGAGGGACCTGGCTCCTGGTGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47125 30 + 190779 aggtctggAGAGGCCTGGCTACTGGTGAGT i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000576v1 77734 30 + 106623 AGGTCTGGAGAGGCCTGGCTACTGGTGAGT i gorGor5.CYUI01000576v1 T 159 C 0 s rheMac8.chr2 202413286 25 + 204787373 AGGTAGGGAGGGACGTGGGTCCT-----GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20186 29 + 192460366 AGGTAGGGAGAGACGTGGCTCCT-GTGGGT i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522685 29 - 1977891 AGGTGGGGAGGGGCGTGGCTCCT-GTCAGT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M e nomLeu3.chr11 120821303 200 + 123690457 T a score=25447.000000 s hg38.chr3_KI270779v1_alt 81465 14 + 205312 GAGTTAATTGAGAT s panTro5.chr3 200066658 14 + 202621043 GAGTTAATTGAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47155 14 + 190779 GAGGTAACTGAGAT i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01000576v1 77764 14 + 106623 GAGTTAATTGAGAT i gorGor5.CYUI01000576v1 C 0 T 45 s nomLeu3.chr11 120821103 13 + 123690457 gaattaattgaat- i nomLeu3.chr11 T 200 C 0 s rheMac8.chr2 202413311 14 + 204787373 GAATTAATTGAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20215 14 + 192460366 GAATTAATTGAGAT i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522714 14 - 1977891 GAATTAATTGAGAT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M a score=52312.000000 s hg38.chr3_KI270779v1_alt 81479 50 + 205312 CAGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGATGAG--GT s panTro5.chr3 200066672 50 + 202621043 CCGGTATGGAGGGACCTGGATCCTGGTGAGTGAGTTAATTGAGATCAG--GT i panTro5.chr3 C 0 I 426 s panPan2.chrUn_NW_014024201v1 47124 50 + 190779 caggtctggAGAGGCCTGGCTACTGGTGAGTGAGGTAACTGAGATCAG--GT i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000576v1 77733 50 + 106623 CAGGTCTGGAGAGGCCTGGCTACTGGTGAGTGAGTTAATTGAGATCCA--TT i gorGor5.CYUI01000576v1 T 45 C 0 s nomLeu3.chr11 120821116 26 + 123690457 taaGTATAGTGA-------------------GAATTAAGCCAGGT------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413325 51 + 204787373 CAGGTTGGGAGGGACGTGGGTCCT-GTGGGTGAATTAATTGAGATCAGGTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20229 49 + 192460366 CAGGTAGGGAGGGACGTGGCTCTG-GTGAGTGAATTAATTGAGATCAG--GT i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522728 49 - 1977891 CAGGTAGGGAGGCACGCGGCTCCT-GTGAATGAATTAATTGAGATCAG--GT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M a score=55247.000000 s hg38.chr3_KI270779v1_alt 81529 32 + 205312 GTGGAGGGACCTGGCTCCTGGTGAGTGAGTTA s panTro5.chr3 200067148 32 + 202621043 GTGGAGGGACCCGGCTCCTGGTGAGTGAGTTA i panTro5.chr3 I 426 C 0 s panPan2.chrUn_NW_014024201v1 47174 32 + 190779 ATGGAGAGGCCTGGCTCCTGGTGAGTGAGTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77783 32 + 106623 ATGGAGGGACCTGTCTCCTGGTGACTGAGTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821142 32 + 123690457 CTGGAGAGGCCTGGCTCCTGGTGAGTGAGTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413376 31 + 204787373 AGGGAGGGACGTGGCTCCT-GTCAGTGAATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20278 31 + 192460366 AGGGAGGGACGTGGCTCCT-GTCAGTGAATTA i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 522777 31 - 1977891 GGGAAGGGACGTGGCTCCT-GTCAGTGAATTA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I e cerAty1.NW_012004056v1 430381 1680 + 16847902 M a score=25438.000000 s hg38.chr3_KI270779v1_alt 81561 9 + 205312 ATTGAGATG s panTro5.chr3 200067180 9 + 202621043 ATTGAGATC i panTro5.chr3 C 0 T 90 s panPan2.chrUn_NW_014024201v1 47206 9 + 190779 ATTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77815 9 + 106623 ATTGAGATG i gorGor5.CYUI01000576v1 C 0 T 90 s nomLeu3.chr11 120821174 9 + 123690457 ATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413407 9 + 204787373 ATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20309 9 + 192460366 ATTGAGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432074 9 + 16847902 ATTGAGATC i cerAty1.NW_012004056v1 M 1680 C 0 s manLeu1.NW_012102020v1 522808 8 - 1977891 -TTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=107228.000000 s hg38.chr3_KI270779v1_alt 81570 45 + 205312 AGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGATC s panTro5.chr3 200067099 45 + 202621043 AGGTATGGAGGGACCTGTCTCCTGGTGAGTGAGTTAATTGAGATC i panTro5.chr3 T 90 T 45 s panPan2.chrUn_NW_014024201v1 47215 45 + 190779 CATTATGGAGGGACCTGTCTCCTGGTGAGTGAGTTAATTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77734 45 + 106623 AGGTCTGGAGAGGCCTGGCTACTGGTGAGTGAGTTAATTGAGATC i gorGor5.CYUI01000576v1 T 90 C 0 s nomLeu3.chr11 120821183 45 + 123690457 AGGTATGGAGGGACCTGGCTCCTGGTAAGTGAATAAATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413416 45 + 204787373 AGGTAGGGAGGGACGTGGCTCCTGGTGAGTGAATTAATTGAGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20318 40 + 192460366 AGGTAGGGAGGGACGTGGGTCCT-----GTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432083 44 + 16847902 AGGTGCGGAGGGACGTGGCTCCTGGTGAGTGAATT-ATTGAGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522816 44 - 1977891 AGGTGGGGAGGGACGTGGCTCCTGGTGAGTGAATT-ATTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=78476.000000 s hg38.chr3_KI270779v1_alt 81615 36 + 205312 AGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTTA s panTro5.chr3 200067099 36 + 202621043 AGGTATGGAGGGACCTGTCTCCTGGTGAGTGAGTTA i panTro5.chr3 T 45 C 0 s panPan2.chrUn_NW_014024201v1 47260 36 + 190779 AGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77779 36 + 106623 CATTATGGAGGGACCTGTCTCCTGGTGACTGAGTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821228 36 + 123690457 AGGTATGGAGGGACCTGGCTCCTGGGGAGTGAGTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413461 31 + 204787373 AGGTAGGGAGGGACATGGGTCCT-----GTGAATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20358 31 + 192460366 AGGTAGGGAGGGACGTGGGTCCT-----GTGAATTA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432127 35 + 16847902 AGGTGGGGAGGGACGTGGCTCCTGGTGAGTGAATT- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522860 36 - 1977891 AGGTGGGGAGGGACGTGGCTCCTGGTGAGTGAATTA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369042 18 - 91754291 I a score=32481.000000 s hg38.chr3_KI270779v1_alt 81651 8 + 205312 ATTGAGAT s panTro5.chr3 200067135 8 + 202621043 ATTGAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47296 8 + 190779 ATTGAGAT i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01000576v1 77815 8 + 106623 ATTGAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821264 8 + 123690457 ATTGAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413492 8 + 204787373 ATTGAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20389 8 + 192460366 ATTGAGAT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432162 8 + 16847902 ATTGAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369060 8 - 91754291 ATTGAGAT i chlSab2.chr15 I 18 C 0 s manLeu1.NW_012102020v1 522896 7 - 1977891 -TTGAGAT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=73765.000000 s hg38.chr3_KI270779v1_alt 81659 31 + 205312 GAGGTA--------------------------------------------TGGAGGGACCTGGCTCCTGGTGAGT s panTro5.chr3 200067143 31 + 202621043 CAGGTG--------------------------------------------TGGAGGGACCCGGCTCCTGGTGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47259 31 + 190779 CAGGTA--------------------------------------------TGGAGGGACCTGGCTCCTGGTGAGT i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000576v1 77823 31 + 106623 GAGGTA--------------------------------------------TGGAGGGACCTGGCTCCTGGTGAAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821272 31 + 123690457 GAGGTA--------------------------------------------TGGAGGGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 45 s rheMac8.chr2 202413500 30 + 204787373 CAGGTT--------------------------------------------GGGAGGGACGTGGCTCT-GGTGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20397 74 + 192460366 CAGGTTGGGAGGGACGTGGGTCCTGTGGGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCC-TGTCAGT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432170 30 + 16847902 CAGGTA--------------------------------------------GGGAGGGACGTGGCTCC-TGTGAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369068 30 - 91754291 CAGGTA--------------------------------------------GGGAGGGGCGTGGCTCC-GGTGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522903 31 - 1977891 CAGGTG--------------------------------------------GGGAGGGACGTGGCTCCTGGTGAGT i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=14055.000000 s hg38.chr3_KI270779v1_alt 81690 6 + 205312 GAGTGA s panTro5.chr3 200067174 6 + 202621043 GAGTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47290 6 + 190779 GAGTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77854 6 + 106623 GAGTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821258 6 + 123690457 GAGTTA i nomLeu3.chr11 T 45 C 0 s rheMac8.chr2 202413530 6 + 204787373 GAATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20471 6 + 192460366 GAATTA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432200 6 + 16847902 GAATTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369098 6 - 91754291 GAATGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522934 5 - 1977891 GAATT- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880784 281 - 74750902 T e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=37760.000000 s hg38.chr3_KI270779v1_alt 81696 8 + 205312 ATTGAGAT s panTro5.chr3 200067180 8 + 202621043 ATTGAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47296 8 + 190779 ATTGAGAT i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01000576v1 77860 8 + 106623 ATTGAGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821264 8 + 123690457 ATTGAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413536 8 + 204787373 ATTGAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20477 8 + 192460366 ATTGAGAT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432206 8 + 16847902 ATTGAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369104 8 - 91754291 ATTGAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522939 8 - 1977891 ATTGAGAT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880503 8 - 74750902 attgagct i calJac3.chr17 T 281 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=10596.000000 s hg38.chr3_KI270779v1_alt 81704 3 + 205312 CAG s panTro5.chr3 200067188 3 + 202621043 CAG i panTro5.chr3 C 0 I 45 s panPan2.chrUn_NW_014024201v1 47259 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000576v1 77868 3 + 106623 CCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821272 3 + 123690457 GAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413544 3 + 204787373 CAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20485 3 + 192460366 CAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432214 3 + 16847902 CAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369112 3 - 91754291 CGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522947 3 - 1977891 CAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880511 3 - 74750902 cag i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=52154.000000 s hg38.chr3_KI270779v1_alt 81707 22 + 205312 GTATGGAG-GGACTTGGCT-CC-TG s panTro5.chr3 200067236 22 + 202621043 GTGTGGAG-GGACCTGGCT-CT-TG i panTro5.chr3 I 45 C 0 s panPan2.chrUn_NW_014024201v1 47262 22 + 190779 GTATGGAG-GGACCTGGCT-CC-TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77871 22 + 106623 GTGTGGAG-GGACGTGGCT-CC-TG i gorGor5.CYUI01000576v1 C 0 T 45 s nomLeu3.chr11 120821275 22 + 123690457 GTATGGAG-GGACCTGGCT-TC-TG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413547 21 + 204787373 GTAGGGAG-GGACGTGGCT-CT-G- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20488 22 + 192460366 GTAGGGAG-GGACGTGGCTCCT-G- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432217 21 + 16847902 GTGGGAAG-GGACGTGGCT-CC-A- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369115 21 - 91754291 GTAGGGAG-GGGCGTGACT-CC-G- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522950 22 - 1977891 GTGGGGAG-GGACGTGGCT-CCTG- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880514 23 - 74750902 gcatagagagggcctggcT-CC-TG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=10505.000000 s hg38.chr3_KI270779v1_alt 81729 2 + 205312 GT s panTro5.chr3 200067258 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47284 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77848 2 + 106623 GT i gorGor5.CYUI01000576v1 T 45 C 0 s nomLeu3.chr11 120821297 2 + 123690457 GT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413568 2 + 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20510 2 + 192460366 GT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432238 2 + 16847902 GT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369136 2 - 91754291 GT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522972 2 - 1977891 GT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880537 2 - 74750902 GT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e saiBol1.JH378146 418962 122 + 17725628 I e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=16340.000000 s hg38.chr3_KI270779v1_alt 81731 4 + 205312 GAGT s panTro5.chr3 200067260 4 + 202621043 GAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47286 4 + 190779 GAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77850 4 + 106623 GAAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821299 4 + 123690457 GAGT i nomLeu3.chr11 C 0 T 45 s rheMac8.chr2 202413570 4 + 204787373 GAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20512 4 + 192460366 GAGT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432240 4 + 16847902 GAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369138 4 - 91754291 GAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 522974 4 - 1977891 GAGT i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 419084 4 + 17725628 GGGA i saiBol1.JH378146 I 122 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880539 0 - 74750902 C e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=38307.000000 s hg38.chr3_KI270779v1_alt 81735 13 + 205312 GAGTTAATTGAGA s panTro5.chr3 200067264 13 + 202621043 GAGTTAATTGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47290 13 + 190779 GAGTTAATTGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 77854 13 + 106623 GAGTTAATTGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821258 13 + 123690457 GAGTTAATTGAGA i nomLeu3.chr11 T 45 C 0 s rheMac8.chr2 202413574 10 + 204787373 GAATTAATTG--- i rheMac8.chr2 C 0 I 5 s macFas5.chr2 20516 13 + 192460366 GAATTAATTGAGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432244 12 + 16847902 GAATT-ATTGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 369142 13 - 91754291 GAATGAATTGAGA i chlSab2.chr15 C 0 I 972 s manLeu1.NW_012102020v1 522978 12 - 1977891 GAATT-ATTGAGA i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 419088 13 + 17725628 GGATTGATAGGGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880539 0 - 74750902 C e colAng1.NW_012118932v1 404673 0 + 7796314 C a score=2084.000000 s hg38.chr3_KI270779v1_alt 81748 3 + 205312 CTC s panTro5.chr3 200067277 3 + 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47303 3 + 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 T 176 s gorGor5.CYUI01000576v1 77867 3 + 106623 CCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821271 3 + 123690457 TGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20529 3 + 192460366 TCA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432256 3 + 16847902 TCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522990 3 - 1977891 TCA i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 419101 3 + 17725628 TCA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880539 0 - 74750902 C e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I a score=7015.000000 s hg38.chr3_KI270779v1_alt 81751 4 + 205312 TGTG s panTro5.chr3 200067280 4 + 202621043 GGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 77870 4 + 106623 GGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821274 4 + 123690457 GGTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20532 4 + 192460366 GGTA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432259 4 + 16847902 GGTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522993 4 - 1977891 GGTG i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 419104 4 + 17725628 GGCG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47306 176 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880539 0 - 74750902 C e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I a score=24742.000000 s hg38.chr3_KI270779v1_alt 81755 19 + 205312 TGGAGGG---------------ACCTGGCTCCTG s panTro5.chr3 200067284 19 + 202621043 TGGAGGG---------------ACCTGGCTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47130 19 + 190779 tggAGAG---------------GCCTGGCTACTG i panPan2.chrUn_NW_014024201v1 T 176 C 0 s gorGor5.CYUI01000576v1 77874 19 + 106623 TGGAGGG---------------ACGTGGCTCCTG i gorGor5.CYUI01000576v1 C 0 T 68689 s nomLeu3.chr11 120821278 19 + 123690457 TGGAGGG---------------ACCTGGCTTCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20536 18 + 192460366 GGGAGAG---------------ACGTGGCTCCT- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432263 18 + 16847902 GGGAGGG---------------GCGTGGCTCCT- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 522997 18 - 1977891 GGGAGGG---------------ACATGGCTCCT- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880539 12 - 74750902 ----------------------TAGTGGCCCCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419108 34 + 17725628 TGGAGGGGGCCTGGCTCCTAGTGAGTGTCCCCAT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I a score=309.000000 s hg38.chr3_KI270779v1_alt 81774 6 + 205312 GTGAGT-- s panTro5.chr3 200067303 6 + 202621043 GCGAGT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47149 6 + 190779 GTGAGT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821297 6 + 123690457 GTGAGT-- i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 20554 2 + 192460366 ----GT-- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432281 6 + 16847902 GTCAGT-- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523015 6 - 1977891 GTCAGT-- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880551 6 - 74750902 --GAGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419142 6 + 17725628 --GAGGGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I e gorGor5.CYUI01000576v1 77893 68689 + 106623 T a score=31298.000000 s hg38.chr3_KI270779v1_alt 81780 15 + 205312 GAGTTAATTGAGATG s panTro5.chr3 200067309 15 + 202621043 GAGTTAATTGAGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47155 15 + 190779 GAGGTAACTGAGATC i panPan2.chrUn_NW_014024201v1 C 0 T 45 s nomLeu3.chr11 120821258 15 + 123690457 GAGTTAATTGAGATG i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 20556 15 + 192460366 GAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432287 15 + 16847902 GAATTAATTGAGATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523021 14 - 1977891 GAATT-ATTGAGATC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880557 15 - 74750902 GGATTGATTGAGGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419148 15 + 17725628 GGATTGATAGGGATC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I e gorGor5.CYUI01000576v1 77893 68689 + 106623 T a score=48901.000000 s hg38.chr3_KI270779v1_alt 81795 29 + 205312 AGGTATGGAG-GGACCTGGCTGCTGGTGAG s panTro5.chr3 200067324 29 + 202621043 AGATATGGAG-GGACCTGGCTCCTGGTGAG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120821273 29 + 123690457 AGGTATGGAG-GGACCTGGCTTCTGGTGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20571 28 + 192460366 AGGTAGGGAG-GGACGTGGCT-CTGGTGAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432302 28 + 16847902 AGGTGGGGAG-GGACGTGGCT-CTGGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523035 28 - 1977891 AGGTAGGGAG-GGACGTGGCT-CTGGTAAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880572 30 - 74750902 AGGCGTGGAGAGGGCCTGGCTCCTGGTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419163 30 + 17725628 AGGCGTGGAGGGGGCCTGGTTCCTGGTGAA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47170 45 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I e gorGor5.CYUI01000576v1 77893 68689 + 106623 T a score=1911.000000 s hg38.chr3_KI270779v1_alt 81824 1 + 205312 T s panTro5.chr3 200067353 1 + 202621043 T i panTro5.chr3 C 0 T 163 s gorGor5.CYUI01000576v1 9204 1 + 106623 T i gorGor5.CYUI01000576v1 T 68689 C 0 s nomLeu3.chr11 120821302 1 + 123690457 T i nomLeu3.chr11 C 0 T 152 s macFas5.chr2 20599 1 + 192460366 T i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432330 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523063 1 - 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47170 45 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880602 0 - 74750902 C e saiBol1.JH378146 419193 0 + 17725628 C e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I a score=1000.000000 s hg38.chr3_KI270779v1_alt 81825 1 + 205312 G s gorGor5.CYUI01000576v1 9205 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 20600 1 + 192460366 G i macFas5.chr2 C 0 I 14 s cerAty1.NW_012004056v1 432331 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 I 14 s manLeu1.NW_012102020v1 523064 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 I 14 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e panPan2.chrUn_NW_014024201v1 47170 45 + 190779 T e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880602 0 - 74750902 C e saiBol1.JH378146 419193 0 + 17725628 C e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e rheMac8.chr2 202413584 5 + 204787373 I e nomLeu3.chr11 120821303 152 + 123690457 T e panTro5.chr3 200067354 163 + 202621043 T a score=4011.000000 s hg38.chr3_KI270779v1_alt 81826 2 + 205312 AG s panPan2.chrUn_NW_014024201v1 47125 2 + 190779 ag i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000576v1 9206 2 + 106623 AG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202413589 2 + 204787373 AG i rheMac8.chr2 I 5 C 0 s macFas5.chr2 20615 2 + 192460366 AG i macFas5.chr2 I 14 C 0 s cerAty1.NW_012004056v1 432346 2 + 16847902 AG i cerAty1.NW_012004056v1 I 14 C 0 s manLeu1.NW_012102020v1 523079 2 - 1977891 AG i manLeu1.NW_012102020v1 I 14 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880602 0 - 74750902 C e saiBol1.JH378146 419193 0 + 17725628 C e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e nomLeu3.chr11 120821303 152 + 123690457 T e panTro5.chr3 200067354 163 + 202621043 T a score=19539.000000 s hg38.chr3_KI270779v1_alt 81828 11 + 205312 GTATGGAGGGA s panTro5.chr3 200067191 11 + 202621043 GTGTGGAGGTA i panTro5.chr3 T 163 C 0 s panPan2.chrUn_NW_014024201v1 47127 11 + 190779 gtctggAGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9208 11 + 106623 GTATGGAGGGA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202413591 11 + 204787373 GTAGGGAGGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20617 11 + 192460366 GTAGGGAGGGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432348 11 + 16847902 GTGGGGAGGGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523081 11 - 1977891 GTGGGGAGGGG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 880602 0 - 74750902 C e saiBol1.JH378146 419193 0 + 17725628 C e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I e nomLeu3.chr11 120821303 152 + 123690457 T a score=52841.000000 s hg38.chr3_KI270779v1_alt 81839 30 + 205312 CCTGGC-TCCTGGTGAGTGAGTTAATTG----------------------------------------AGG s panTro5.chr3 200067202 30 + 202621043 CCTGGC-TCCTGGTGAGTGAGTTAATTG----------------------------------------AGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47138 30 + 190779 CCTGGC-TACTGGTGAGTGAGGTAACTG----------------------------------------AGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9219 31 + 106623 CCTGGCTTCCTGGTGAATGAGTTAATTG----------------------------------------AAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821151 30 + 123690457 CCTGGC-TCCTGGTGAGTGAGTTAATTG----------------------------------------AGA i nomLeu3.chr11 T 152 C 0 s rheMac8.chr2 202413602 25 + 204787373 CGTGGG-TCCT-----GTGAATTAATTG----------------------------------------AGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20628 69 + 192460366 CGTGGC-TCTG-GTGAGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGGTCCTGTGAATTAATTGAGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432359 29 + 16847902 CGTGGC-TCCT-GTGAATGAATTAATTG----------------------------------------AGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523092 29 - 1977891 CGTGGC-TCCTGGTGAGTGAATT-ATTG----------------------------------------AGA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 880602 28 - 74750902 --TGGC-CCCACAAGGGAGGATTGATTG----------------------------------------AGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419193 28 + 17725628 --TGTT-CCCACGAGGGAGGATTGATAG----------------------------------------GGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e colAng1.NW_012118932v1 404673 0 + 7796314 C e chlSab2.chr15 369155 972 - 91754291 I a score=7777.000000 s hg38.chr3_KI270779v1_alt 81869 2 + 205312 TC s panTro5.chr3 200067232 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47168 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 I 136 s gorGor5.CYUI01000576v1 9250 2 + 106623 AC i gorGor5.CYUI01000576v1 C 0 I 1 s nomLeu3.chr11 120821181 2 + 123690457 TG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413627 2 + 204787373 TC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20697 2 + 192460366 TC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432388 2 + 16847902 TC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523121 2 - 1977891 TC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404673 2 + 7796314 TC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880630 2 - 74750902 TC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419221 2 + 17725628 TC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e chlSab2.chr15 369155 972 - 91754291 I a score=250324.000000 s hg38.chr3_KI270779v1_alt 81871 67 + 205312 AGGTATGGAG-GGACCTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATCAG--TTATGGAG-GGACCTGGCTCC s panTro5.chr3 200067234 67 + 202621043 AGGTGTGGAG-GGACCTGGCTCTTGGTGAGT--------------GAGTTAATTGAGATCAG--GTGTGGAG-GGACCTGGCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47306 67 + 190779 AGGTGTGGAG-GGACCTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATCAG--GTGTGGAG-GGACCTGGCTCC i panPan2.chrUn_NW_014024201v1 I 136 C 0 s gorGor5.CYUI01000576v1 9253 64 + 106623 CGGTGTGGAG-GGACGTGGCTCCCTG---GT--------------GAGTTAATTGAGACCCG--GTGTGGAC-GGACGTGGCTCC i gorGor5.CYUI01000576v1 I 1 C 0 s nomLeu3.chr11 120821183 67 + 123690457 AGGTATGGAG-GGACCTGGCTCCTGGTAAGT--------------GAATAAATTGAGATGAG--GTATGGAG-GGACCTGGCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413629 68 + 204787373 AGGTTGGGAG-GGACGTGGGTCCT-GTGGGT--------------GAATTAATTGAGATCAGGTGTAGGGAG-GGACGTGGCTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20699 68 + 192460366 AGGTTGGGAG-GGACGTGGGTCCT-GTGGGT--------------GAATTAATTGAGATCAGGTGTAGGGAG-GGACGTGGCTCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432390 66 + 16847902 AGGTAGGGAG-GGACGTGGCTCCT-GTCAGT--------------GAATTAATTGAGATCAG--GTAGGGAG-GGACGTGGCTCT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 523123 66 - 1977891 AGGTGGGGAG-GGACGTGGCTCCTGGTGAGT--------------GAATT-ATTGAGATCAG--GTGGGGAG-GGGCGTGGCTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404675 66 + 7796314 AGGTGGGGAG-GGGTGTGGTTCCT-GTGAGT--------------GAATTAATTGAGATCAG--GTGGGGAG-GGGCGTGGCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880632 83 - 74750902 AGGCGTGGAGAGGGCCTGGCTCCTGGTGAGTGGCCCCACAAGGGAGGATTGATTGAGGTCAG--GCGTGGAGAGGGCCTGGCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419223 83 + 17725628 AGGCGTGGAGAGGGCCTGGCTCCTAGTGAGTGTCCCCATGAGGGAGGATTGATTGAGGTCAG--GCGTGGAGGAGGCCTGGCTCC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e otoGar3.GL873829 384209 0 - 608964 C e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e chlSab2.chr15 369155 972 - 91754291 I a score=203355.000000 s hg38.chr3_KI270779v1_alt 81938 59 + 205312 TGGTGAGTG--------------AGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGTGAGTC-TCCTG-- s panTro5.chr3 200067301 59 + 202621043 TGGCGAGTG--------------AGTTAATTGAGATCAGATATGGAG-GGACCTGGCTCCTGGTGAGTC-ACCCG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47373 59 + 190779 TGGCGAGTG--------------AGTTAATTGAGATCAGATATGGAG-GGACCTGGCTCCTGGTGAGTC-ACCCG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9317 55 + 106623 TGGTGAGTG------------------AACTGAGATGAGATATGGAG-GGACGTGGCTCCTGGTGAGTC-GCCCG-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821250 59 + 123690457 TGGGGAGTG--------------AGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTTCTGGTGAGTC-ACCAC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413697 58 + 204787373 TG-TCAGTG--------------AATTAATTGAGATCAGGTGGGGAG-GGACGTGGCTCCTGGTGAGTG-TACGC-- i rheMac8.chr2 C 0 I 3 s macFas5.chr2 20767 58 + 192460366 TG-TCAGTG--------------AATTAATTGAGATCAGGTGGGGAG-GGACGTGGCTCCTGGTGAGTG-TACGC-- i macFas5.chr2 C 0 I 3 s cerAty1.NW_012004056v1 432456 58 + 16847902 GG-TGAGTG--------------AATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCTGGTGAGTG-TACGC-- i cerAty1.NW_012004056v1 C 0 I 3 s manLeu1.NW_012102020v1 523189 57 - 1977891 TG-TCAGTG--------------AATT-ATTGAGATCAGGTAGGGAG-GGACGTGGCTCCTGGTGAGTG-TACGC-- i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 404741 54 + 7796314 TG----GTG--------------AATTAATTGAAATCAGGTGGGGAG-GGGCGTGGCTCCT-GTGAATG-TTGGC-- i colAng1.NW_012118932v1 C 0 I 3 s calJac3.chr17 880715 75 - 74750902 TGGTGAGCGGCCCCACGAGGGAGGATTGATTGAGATCAGACGTGGAGAGGGCCTGGCTCCTGGTGACTGTTCCCC-- i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 419306 74 + 17725628 TGGTGAGTGTCCCCACGAGGGAGGATTGATTGAGGTCAGGCGTGGAGGGGGCCTGGCTCCTGGTGAGTG-TCCCC-- i saiBol1.JH378146 C 0 I 2 s otoGar3.GL873829 384209 53 - 608964 tggtgag----------------aattaattgagatcaggtgtggagagggcctggcTT-------GTG-TACGCTG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e canFam3.chr33 29037871 32 + 31377067 I e aotNan1.NW_018503669v1 34280 122 - 69927 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e chlSab2.chr15 369155 972 - 91754291 I a score=154178.000000 s hg38.chr3_KI270779v1_alt 81997 26 + 205312 GAGGCAGCTGCTATCT--GGGAACACA-G s panTro5.chr3 200067360 26 + 202621043 GAGGCAGCTGCTATCT--GGGAACACA-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47432 26 + 190779 GAGGCAGCTGCTATCT--GGGAACACA-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9372 28 + 106623 GAGGCAGCTGCTATCTGGGGGAACACA-G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821309 26 + 123690457 GAGGCAGCTGCTATCT--GGGAACACA-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413758 26 + 204787373 GAGGCAGCTGCTAGCT--GGGAACACA-G i rheMac8.chr2 I 3 C 0 s macFas5.chr2 20828 26 + 192460366 GAGGCAGCTGCTAGCT--GGGAACACA-G i macFas5.chr2 I 3 C 0 s cerAty1.NW_012004056v1 432517 26 + 16847902 GAGGCAGCTGCTAGTT--GGGAACACA-G i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 370127 26 - 91754291 GAGGCAGCTGCTAGTT--GGGAACACA-G i chlSab2.chr15 I 972 C 0 s manLeu1.NW_012102020v1 523249 26 - 1977891 GGGGCAGCTGCTAGTT--GGGAACACA-G i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 404798 26 + 7796314 GAGGCAGCTGCTATTT--GGGAACACA-G i colAng1.NW_012118932v1 I 3 C 0 s calJac3.chr17 880792 25 - 74750902 GAGGCAGCTGTGATTT--GGAAACACA-- i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 419382 25 + 17725628 GAGGCAGCTGTGGTTT--GGAAACACA-- i saiBol1.JH378146 I 2 C 0 s aotNan1.NW_018503669v1 34402 26 - 69927 GAGGCAGCTGTGATTT--GGAAACACAG- i aotNan1.NW_018503669v1 I 122 C 0 s otoGar3.GL873829 384262 4 - 608964 GAGA------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29037903 26 + 31377067 GACATAGCTGTCATTT--GGGGACATG-A i canFam3.chr33 I 32 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e cebCap1.NW_016107444v1 378017 65 - 6778120 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M a score=293786.000000 s hg38.chr3_KI270779v1_alt 82023 35 + 205312 GCACAGGTGGGAA-----CAGACCTTCACTTCCTGCTCAC s panTro5.chr3 200067386 34 + 202621043 GC-CAGGTGGGAA-----CAGAGCTTTACTTCCTGCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47458 34 + 190779 GC-CAGGTGGGAA-----CAGACCTTTACTTCCTGCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9400 36 + 106623 CA-CAGGTGGGAAG---CAGGACCTTCACTTCCTGCTCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821335 35 + 123690457 GCACAGGTGGGAA-----TAGACCTTCACTTCCTGCTCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413784 35 + 204787373 GCACAGGTGGGAA-----CAGACCTTCACTTCCTGCTCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20854 35 + 192460366 GCACAGGTGGGAA-----CAGACCTTCACTTCCTGCTCAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432543 35 + 16847902 GCACAGGTGGGAA-----CAGACCTTCACTTCCCGCTCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370153 35 - 91754291 GCACAGGTGGGAA-----CAGACCTTCACTTCCTGCTCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523275 35 - 1977891 GCACAGGTGGGAA-----CAGACCTTCACTTCCCACTCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404824 35 + 7796314 GCACAGGTGGGAA-----CAGACCTTCACTTCCTGCGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880817 35 - 74750902 GCACAGGTGGGAA-----GAGAACTTCGCTTCCTGCTCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419407 35 + 17725628 GCACAGGTGGGAA-----CAGAGCTTCACTTCCTGCTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378082 35 - 6778120 GCACAGGTGGGAA-----CAGAACTTCGCTTCCTGCTCTC i cebCap1.NW_016107444v1 I 65 C 0 s aotNan1.NW_018503669v1 34428 34 - 69927 -CACAGGTGGGAA-----CAGAACGTTGCTTCCTGCTCAC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 384266 27 - 608964 --------GGGAA-----CAGGCCTTTACTCTCTGCTCAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29037929 40 + 31377067 AAATAAGCTGGAAAGATACAGCCTTTTCTTTTCTGCCCGC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e mm10.chr16 65401596 1124 - 98207768 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M a score=150684.000000 s hg38.chr3_KI270779v1_alt 82058 14 + 205312 TTAGGTTCAGTGAG s panTro5.chr3 200067420 14 + 202621043 TTAGGTTCAGCGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47492 14 + 190779 TTAGGTTCAGCGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9436 14 + 106623 TTAGGTTCAGCGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821370 14 + 123690457 TTAGGTTCAGCGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413819 14 + 204787373 TTAGGTTCAGCGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20889 14 + 192460366 TTAGGTTCAGCGGC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432578 14 + 16847902 TTAGGTTCAGCGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370188 14 - 91754291 TTAGGTTCAGCGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523310 14 - 1977891 TTAGGTTCAGCGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404859 14 + 7796314 TTAGGTTCAGCGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880852 14 - 74750902 TTAGGTTCAGCGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419442 14 + 17725628 TTAGGTTCAGCGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378117 14 - 6778120 TTAGGTTCAGTGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34462 14 - 69927 TTAGGTTCACCAGC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 384293 12 - 608964 --AGGTCCAGCAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65402720 14 - 98207768 TCAGGTTCTGCAGC i mm10.chr16 I 1124 C 0 s canFam3.chr33 29037969 14 + 31377067 TTAGGTCCACCAGC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7391079 394 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M a score=583457.000000 s hg38.chr3_KI270779v1_alt 82072 47 + 205312 TTCTCCAAACCAGCCTCCCAGGAATGCCATTCAACATGGCTGTGAGG s panTro5.chr3 200067434 47 + 202621043 TTCTCCAAACCAGCCTCCCAGGAATGCCGGTCTCCATGGCTGTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47506 47 + 190779 TTCTCCAAACCAGCCTCCCAGGAATGCCGGTCTCCATGGCTGTGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9450 47 + 106623 TTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCTGTGAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821384 47 + 123690457 TTCTCCAAACCAGCCTGCCCGGAATGCCGTTCTCCATGGTCGAAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202413833 47 + 204787373 TTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCGTGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20903 47 + 192460366 TTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCGTGAGG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432592 46 + 16847902 TTCTCCAAACCAGCCTCCCAGCAATGCCGTTCTCCATGGCCGTGA-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370202 47 - 91754291 TTCTCCAAACCAGCCTCCCAGGAATGCTGTTCTCCATGGCCGTGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523324 47 - 1977891 TTCTCCAAACCAGCCTCCCAGGAATTCCCTTCTCCGTGGCCGTGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404873 47 + 7796314 TTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCGTGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880866 47 - 74750902 TTCTCCAAACCGGCCTCCCAGGAATGCCGTTCTCCATGGCCATAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419456 47 + 17725628 TTCTCCAAACCAGCCTCCCAGGAATACCATTCTCCATGGCCATAGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378131 47 - 6778120 TTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCATAGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34476 47 - 69927 TTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCGTAGAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7391473 47 + 22200726 TTCTCCAGACCAGCCTCCCAGGAATGCCGCTCTCCGTGGCCGTGAAG i proCoq1.NW_012133858v1 I 394 C 0 s otoGar3.GL873829 384305 47 - 608964 TTCTCCAACGCAGCCTCCCAGGAATGCCCCTGTCCATGGCTGTGAAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65402734 44 - 98207768 TCCTCCA---CAGCCTCTCCAGAAGGCCACTCTCGGTGACTATGAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29037983 47 + 31377067 TTCTCCAAGCCAGCCTCCCAGGGCTGCCCCTCTCCATCTCCATGAAG i canFam3.chr33 C 0 C 0 e micMur3.chr1 25869898 566 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M a score=211940.000000 s hg38.chr3_KI270779v1_alt 82119 24 + 205312 AG-AATAAAGAAG-AGAGCCTGACTC s panTro5.chr3 200067481 24 + 202621043 GG-AATCAAGAAG-AGAGCCTGACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47553 24 + 190779 GG-AATCAAGAAG-AGAGCCTGACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9497 26 + 106623 GGAAATGAAGAAGAAGAGCCTGACTC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202413880 24 + 204787373 GG-AATCAGAAAG-AGACCCTGACTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20950 24 + 192460366 GG-AATCAGAAAG-AGACCCTGACTC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432638 24 + 16847902 GG-AATCAGAAAG-AGAACCTGACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370249 24 - 91754291 GG-AATCAGGAAG-AGGCCCTGACAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523371 23 - 1977891 GG--ATCAGAAAG-AGACCCTGACTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404920 24 + 7796314 GG-AATCAAGAAG-ACAGCCTGACTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880913 24 - 74750902 GG-GATCAAGAAG-AAAGCCTGATGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419503 24 + 17725628 GG-GATCAAGAAG-AAAGCCTGACTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378178 24 - 6778120 GG-GATCAAGAAG-AAAGCCTGACTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34523 24 - 69927 AG-GATCAAGAAG-AAAGCCTGACTC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7391520 24 + 22200726 GA-AATCAAGAAG-AGAGCCTGACTC i proCoq1.NW_012133858v1 C 0 I 58 s otoGar3.GL873829 384352 24 - 608964 GG-AATCAAGAAG-AGAGCCTGACTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65402778 23 - 98207768 GG-AATCAGGAAG-AGAGCCTGAGT- i mm10.chr16 C 0 C 0 s canFam3.chr33 29038030 15 + 31377067 GG-GATCAAGAAG-ATC--------- i canFam3.chr33 C 0 C 0 e micMur3.chr1 25869898 566 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=517263.000000 s hg38.chr3_KI270779v1_alt 82143 61 + 205312 ----CTCTCCTGAGGCCCCTTCCCCACCCTG-AGCCAGCAGGATCCACGGAGCAGAGGTCATCTGT s panTro5.chr3 200067505 61 + 202621043 ----CTCTCCTGAGGCCCCTTCCCCACCCTG-AGCCAGCAGGATCCACGGAGCAGAGGTCATCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47577 61 + 190779 ----CTCTCCTGAGGCCCCTTCCCCACCCTG-AGCCAGCAGGATCCACGGAGCAGAGGTCATCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9523 62 + 106623 ----CTCTCCTGAGGCCCCTTCCCCACCCTGCATCCAGCAGGATCCACGGAGCAGAGGTAATCTGT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202413904 61 + 204787373 ----CTCTCCTGAGGCCCCTTCCACACCCTG-AGCCAGCAGAATCCACGCAGCAGAGGTCATCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 20974 61 + 192460366 ----CTCTCCTGAGGCCCCTTCCACACCCTG-AGCCAGCAGAATCCACGCAGCAGAGGTCATCTGT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432662 60 + 16847902 ----CTCTCCTGAGGCCCCTTCCACA-CCTG-AGCCAGCAGGACCCACGCAGCAGAGGTCATCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370273 61 - 91754291 ----CTCTCGTGAGGCCCCTTCCACACCCTA-AGCCAGCAGGATCCACGCAGCAGAGGTCATCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523394 60 - 1977891 ----CTCTCCTGAGGCCCCTTCCACA-CCTG-AGCCAGCAGGACCCACGCAGCAGAGGTCATCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 404944 61 + 7796314 ----CTCTCCTGAGGCCTCTTCCACACCCTG-AGCCAGCAGGATCCACGGAGCAGAGGTCATCTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 880937 61 - 74750902 ----CGCTCCTGAGGCCCCTTCTGCACACCG-AGCCAGCAGGATCCATGGAGCAGAGGTCATCCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419527 61 + 17725628 ----CTCTCCTGAGGCCCCTTCCCCACCCCG-AGCCAGCAGGATCCATGGAGCAGAGGTCATCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378202 61 - 6778120 ----CTCTCCTGAGGCCCCTTCCCCACCCCG-AGCCAGCAGAATCCATGGAGCAGAGGTCATCTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34547 61 - 69927 ----CTCTCCTGAGGCCCCTTCCCCACCCCG-AGCCAGCAGGATCCATGGAGCAGAGGTCATCTGT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 384376 59 - 608964 ----CTCCCCTGAGTCACCTCCCG-ACCCTG-GGCCAGCAGCACCCGTGGATCAGAGGCCATCTG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65402801 46 - 98207768 -----------------CTTTCTCCAGCCCT-GGCCAGCAGGACCCATGGAACAGAGGTCACCT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29038045 49 + 31377067 CGAGGTCCCCTGAAGCTCCTCGC---------TGCC--------CCGTGATGCAGAGCCCACCCTG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7391544 58 + 22200726 I e micMur3.chr1 25869898 566 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=334273.000000 s hg38.chr3_KI270779v1_alt 82204 43 + 205312 CCCCAGCTTGG-CCCACTGAGGCCAGCATGGCTGG----GCCCAGGAT s panTro5.chr3 200067566 43 + 202621043 CCCCAGCTTGG-CCCGCTGAGGCCAGCATGGCTGG----GCCCATGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47638 43 + 190779 CCCCAGCTTGG-CCCGCTGAGGCCAGCATGGCTGG----GCCCATGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9585 44 + 106623 CCCCAGCTTGGCCCCACTGAGGCCAGCATGGCTGG----GCCCAGGAT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202413965 41 + 204787373 CCCCAGCTTGG-TCCACTGAGGTCAGCACGGCTGG------CCAGGGT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 21035 41 + 192460366 CCCCAGCTTGG-CCCACTGAGGTCAGCACGGCTGG------CCAGGGT i macFas5.chr2 C 0 I 1 s cerAty1.NW_012004056v1 432722 41 + 16847902 CCCCAGCTTGG-CCCACTGAGGTCAGCACGGCTGG------CCAGGGT i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 370334 41 - 91754291 CCCCAGCTTGG-CCCACTGAGGTCAGCATGGCTGG------CCAGGGT i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 523454 41 - 1977891 CCCCAGCTTGC-CCCACTGAGGTCAGCACGGCTGG------CCAGGGT i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 405005 43 + 7796314 CCCCAGCTTGG-CCCACTGAGGTAAGCATGGCTGG----GCCCAGGGT i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 880998 43 - 74750902 CCCCAGCGTGG-CTGGCTGAGGCCAGAATTGCTGG----GCCAGGTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419588 43 + 17725628 CCCCAGCGTGG-CCGGCTGAGGCCAGAACTGCTGG----GCCAGGGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378263 43 - 6778120 CCCCAGCGTGG-CCAGCTGAGGCCAGAATTGCTGG----GCCAGGGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34608 43 - 69927 CCCCAGCGTGG-CCGGCGGAGGCCAGAATTGCTGG----GCCAGGGGT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7391602 43 + 22200726 CCCCACCTTGG-CGTGCTGAAGCCGGTGTCGCTGG----GCCCAGAGC i proCoq1.NW_012133858v1 I 58 I 1 s otoGar3.GL873829 384435 43 - 608964 CCTCACGTTGG-CCTGCTGAGGCCAGTGTTGCTGG----GCCCAGGGA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65402847 40 - 98207768 -------TTGG-TTTGTTGGGGCCAACATGGCTGGCCCAGCCCAGGGG i mm10.chr16 C 0 I 1 s canFam3.chr33 29038094 41 + 31377067 --CCCCCCTGG-GCCAGCGAGGGCCTTATCACTGG----ATCTGGTGG i canFam3.chr33 C 0 C 0 e micMur3.chr1 25869898 566 - 114275543 I e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=1144038.000000 s hg38.chr3_KI270779v1_alt 82247 90 + 205312 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagaggaaaaccgaaatctacaattgtcataaacacatttaaat s panTro5.chr3 200067609 90 + 202621043 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAACCAGAGCAAAACTGAAATCTACAATTGTCATAAACACATTTAAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47681 90 + 190779 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAACCAGAGCAAAACTGAAATCTACAATTGTCATAAACACATTTAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9629 89 + 106623 GCTTGTCTCTCAGCT-CCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatctacaattgtcataaacacatttaaat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414007 90 + 204787373 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAACCAGAGCAAAACTGAAATCTACaatcgtcataaacacatttaaat i rheMac8.chr2 I 1 C 0 s macFas5.chr2 21077 90 + 192460366 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatctacaatcgtcataaacacatttaaat i macFas5.chr2 I 1 C 0 s cerAty1.NW_012004056v1 432764 90 + 16847902 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatctacaattgtcataaacacatttaaat i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 370376 90 - 91754291 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatttacaatcgtcataaacacatttaaat i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 523496 90 - 1977891 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAACCAGAGCAAAACTGAAATCTACAATTGTCATAAACACATTTAAAT i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 405049 90 + 7796314 GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAACCGGAGCAAAACTGAAATGTACAGTTGTCATAAACACATTTAAAT i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 881041 90 - 74750902 GCTTGTCTCTCAGCTCGCATCCTGTGTACTTCTGCATTGGTTTAGCCAGAGCAAAACTGAAATCTACAGCTGTCATGAACACATTTAAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419631 90 + 17725628 GCTTGTCTCTCAGCTCACATCCTGTATACTTTCACATTGGTTTAGCCAGAGCAAAACTGAAATCTACAGTTGTCATGAACACGTTTAAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378306 90 - 6778120 GCTTGTCTCTCAGCTCACATCCTGTATACTTTCACATTGGTTTAGCCAGAGCAAAACTGAAATGTACAGTTGTCATGAACACGTTTAAAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34651 90 - 69927 GCTTGTCTCTCAGCTCACGTCCTGTATACTTTCACGTTGGTGTAGCCAGAGCAAAACTGAAATCTACAGTTGTCATGAACACATTTAAAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25870464 90 - 114275543 GCTTGTCTCTCAGCTCCCATCCTATACACTTCCACGTTGGTTTAACCGGAGGGGAACTGAAATCTGCGATTGCTGTAAACACATATCAGT i micMur3.chr1 I 566 C 0 s proCoq1.NW_012133858v1 7391646 90 + 22200726 GCTTGTGCCTCGGCTCCCATTCCGTGCACTTCCACGTTGGTTTAACCAGAGGGGAAGTGAAATCTGCAATTGTTGTAAACACATTTCAGT i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 384479 90 - 608964 GCTGGTCTCTCTCCTCCCATCCTGTGTACTTCCACATCGGTTTAACCAGAGGGAAACTGAAATCTGCAATTGTTGTAAATACATTTCAGT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65402888 90 - 98207768 ATCTGTCTCTCAGCTGCCATCCTATTAGCCCCCACATTGGCTTGGCCTGGGGAAAACTGAAACCTGGGATTGTTGTAAACACATTTAAAA i mm10.chr16 I 1 C 0 s canFam3.chr33 29038135 90 + 31377067 GCTTGTCTCCTGGCTTCTGTTCTGTGTTCTTCCACATTGGCTCAGCCAGAGGAAAATGGAAATCTGTGATTTTTGTAAACACATTTAAAT i canFam3.chr33 C 0 I 123 e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=238380.000000 s hg38.chr3_KI270779v1_alt 82337 27 + 205312 gtgcgtagaatcagc----------------------------------------------catacaaattgt s panTro5.chr3 200067699 27 + 202621043 GTGCGTAGAATCAGC----------------------------------------------CTTACAGGTTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47771 27 + 190779 GTGCCTAGAATCAGC----------------------------------------------CTTACAGGTTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9718 27 + 106623 gtgcgtagaatcagc----------------------------------------------catgcaaattgt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414097 27 + 204787373 gtgcataggatcagc----------------------------------------------catacaaattat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21167 27 + 192460366 gtgcataggatcagc----------------------------------------------catacaaattat i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432854 27 + 16847902 gtgcgtaggatcagc----------------------------------------------catacaaattat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370466 27 - 91754291 gtgcataggatcggc----------------------------------------------catacaaatgat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523586 27 - 1977891 GTGCGTAGGATCAGC----------------------------------------------CATAAAAATTAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405139 27 + 7796314 GTGCATAGGATCAGC----------------------------------------------CATACAAATTAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881131 27 - 74750902 GTGTGTAGAATCAGT----------------------------------------------GATACAAGTTAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419721 25 + 17725628 GTGCGTCGAATCAGT----------------------------------------------GAG--AAGCTAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378396 27 - 6778120 GTGCGTAGAATCAGT----------------------------------------------GATACAAGCTAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34741 27 - 69927 GTGCCTAGAATCAGT----------------------------------------------GATGCAAGTTAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25870554 27 - 114275543 GTGCACAGAATCAAC----------------------------------------------CATAAAAATCAT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7391736 27 + 22200726 GTGCGTAGAATCAAC----------------------------------------------CATACAAATTAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 384569 27 - 608964 GTGTGTAGAATCAAC----------------------------------------------CATACAAATTAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65402978 27 - 98207768 GTGCACAGAATTAGC----------------------------------------------CATAAAAATTAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29038348 73 + 31377067 gtgcatggagcctgcttctccctctgcctatgtctctgcttctctctctctgtgactatcataaataagttaa i canFam3.chr33 I 123 C 0 e dasNov3.JH569502 3860175 54 + 6579706 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=549559.000000 s hg38.chr3_KI270779v1_alt 82364 50 + 205312 gaaa------------------catacatttggctcatggtattattcactgttttgtggtggttaca s panTro5.chr3 200067726 50 + 202621043 GAAA------------------CATGCATTTGGCTCATGGTGTTATTCACTGTTTTGTGGTGGTTACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47798 50 + 190779 GAAA------------------CATGCATTTGGCTCATGGTGTTATTCACTGTTTTGTGGTGGTTACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9745 50 + 106623 gaaa------------------catacatttggctcatggtattattcactgttttgtggtggttaca i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414124 50 + 204787373 gaaa------------------catacgtttggctcacggtattattcattgttttgtgacggctaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21194 50 + 192460366 gaaa------------------catacgtttggctcacggtattattcattgttttgtgacggctaca i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432881 50 + 16847902 gaaa------------------catacgtttggctcacggtattattcattgttttgtgacggctaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370493 50 - 91754291 gaaa------------------catacgtttggctcgtggtattattcattgttttgtgacggctaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523613 50 - 1977891 GAAA------------------CATACGTTTGGCTCACGGTATTATTCATTGTTTTTTGACGGCTACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405166 50 + 7796314 GGAA------------------CATACGTTTGGCTCACAGTACTATTCATTGTTTTGTGATGGCTACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881158 48 - 74750902 GAAA------------------CAC--GTTTGGCTCACGTTTTTATTCATTGTTTTGTGATGGTTGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419746 48 + 17725628 GAAA------------------CCT--GTTTGGCTCACGGTATCATTCATTGCTTTGTGATGGTTGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378423 48 - 6778120 GAAA------------------CAT--GTTTGGCTCACGGTATTATTCATTGCTTTGTGATGGTTGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34768 48 - 69927 GAAA------------------CAT--GTTTGGCTCACGGCATTATTCGTTGTTTTGTGATGGTTGCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25870581 50 - 114275543 GAAA------------------CTTAAGTTTGGCTCATAGTGTTTGTCATTGTTTTGTGATGGTTACA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7391763 50 + 22200726 GAGA------------------CTTAAGATCGGCTCATGGTATTTGTCATTGTTTTATGATGGTTTCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 384596 49 - 608964 GAAG------------------CGTAAGTTTGGCTTATGGCATTAGTCATTG-TTTGTGATGGTTATA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65403005 49 - 98207768 AAAA-------------------ATACACTTGGCTCGTAATATTGCTCATTGTGTTGTGACGATTACA i mm10.chr16 C 0 I 1021 s canFam3.chr33 29038421 64 + 31377067 aaaaaaaCACACACAAAAAAAACATAAATTTGGCTCATGGAATTCATCG----TTTGTGGTGGTTACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3860229 47 + 6579706 GAAA------------------CATAATATTGTCTCATGGTGT---TCATTGTTTTGTGATGGTTACA i dasNov3.JH569502 I 54 C 0 e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=1649969.000000 s hg38.chr3_KI270779v1_alt 82414 137 + 205312 gtgactatagcaaacatttcttgaaagtagaaaataagaacCCAGCACCCC-TTGAGCTAAGTAATGTGCCC-TCTGTCCTCAATATTCCTTCCTGGGCTCCACATTAC-TGCCCTTAAGTCTGGAAATATTCTGGTCTG s panTro5.chr3 200067776 137 + 202621043 GTGACTGTAGCAAACATTTATTGAAAGTAGAAAATAAGAACCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTGTCCTCAATATTCCTTCCTGGGCTCCACGTTAC-TGCCCTTCAGTCTGGAAATATTCTGGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47848 137 + 190779 GTGACTGTAGCAAACATTTATTGAAAGTAGAAAATAAGAACCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTGTCCTCAATATTCCTTCCTGGGCTCCACGTTAC-TGCCCTTCAGTCTGGAAATATTCTGGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9795 137 + 106623 atgactatagcaaacatttcttgaaagtagaaaataagaacCCAGCACCAC-TTTAGCTAAGTAATGTGCCC-TCTGTCCTCAATATTCCTTCCTGGGCTCCACATTACTTGCCCTTAAGTCT-GAAATATTCTGGTCTG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414174 137 + 204787373 atgactatagcaaacatttctcgaaagtagaaaataagaacCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCCGGGCTCCACATTAC-TGCCCTTAAGTCTGGAAATATTCTGGTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21244 137 + 192460366 atgactatagcaaacatttctcgaaagtagaaaataagaacCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCCGGGCTCCACATTAC-TGCCCTTAAGTCTGGAAATATTCTGGTCTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 432931 137 + 16847902 atgactatagcaaacatttctcgaaagtagaaaataagaacCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTTTTCTCAATATTCCTTCCCGGGCTCCACATTAC-TGCCCTTAAGCCTGGAAATATTCTGGTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370543 137 - 91754291 atgactatagcaaacatttcttgaaagtagaaaataagaacacagCACCCC-TTTAGGTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCTGGGCTCCACATTAC-TGCCCTTAAGTCTGGAAATATTCTGGTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523663 137 - 1977891 ATGACTATAGCAAACATTTCTCGAAAGTAGAAAATAAGAACCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTTTTCTCAATATTCCTTCCCGGGCTCCACATTAC-TGCCCTTAAGCCTGGAAATATTCTGGTCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405216 137 + 7796314 ATGACTATAGCAAACATTTCTTGAAAGTAGAAAATAAGAACCCAGCACCCC-TTTAGCTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCTGGGCTCCACATTAC-TGCCCTTAAGCCTGGAAATATTCTGGTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881206 137 - 74750902 ATTACTATAGCAAACATTTCTTGAAAGTAGAAAATAAAAACCCAGCATCCC-TTTAGCTAAGTAATTTGTGC-TGTCTCCTCAATATTCCTTCCCGGGCTCCACATTAC-CGCCCTTAAGTCCGGAAATATTCTGGTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419794 137 + 17725628 ATTACTATAGCAAACATTTCTTGAAAGTAGAAAATAAAAACCCAGCATCCC-TTTAGCTAAGGAATTTGTGC-TGTCTCCTCAATATTCCTTCCTGGGCTCCACATTAC-TGCCCTTAAGTCTGGAAATATTCTGGTCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378471 137 - 6778120 ATTACTATAGCAAACATTTCTTGAAAGTAGAAAATAAAAACCCAGCATCCC-TTTAGCTAAGTAATTTGTGT-TGTCTCCTAAGCATTCCTTCCTGGGCTCCGCATTAC-TGCCCGTAAGTCTGGAAATATTCTGGTCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34816 137 - 69927 ATTACTATAGCGAACATTTCTTGAGAGTAGAAAATAAAAACCCAGCATCCC-TTTAGCTAAGTAATTTGTGC-CGTCTTCTCAGTATTCCTTCTCGGGCTCCACATTAC-TGCCCTTATGTCCGGAAATATTCTGGTCTG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25870631 138 - 114275543 GTAACTATAGCAAACATTTCTTAAAAGTAGAAAATAAGAACCTGGCACCCCATTTGGCTAAGTAATTTGTCC-TCTCTCCTCGAAATTCCTCCCTGGGCTCCACATTAT-TGCCTATAAGTCTGGAAGTCTCCTGGTCTG i micMur3.chr1 C 0 I 322 s proCoq1.NW_012133858v1 7391813 134 + 22200726 GTGACTATAACAAACATTTCTTAAAAGTAGAAAGTAAGAACCTGGCACCCC---TGGCTAAGTAATCTGTCC-TTTCTCCT-ACTGTTCCTCTCTGGGCTCCACATTAC-TGCCTGGAAGTCTGGAAGTCTCCTGGTCTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 384645 136 - 608964 GTGACTATAACAAACATTTCTCGAAAGTAGAAAATAAGAACCAGGCACCCT-TTTGGCTAAGCAATTTGTCC-TCTCTCCGCAGTATTCCTCCCT-GGCCCCGTGTTAC-TACCTATAAGTCTAGAAGTATTCTGGTCTA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29038485 138 + 31377067 ATGAATAGAGCAAACATTTCTTGAAAGTGGAATATGAGAACCTAGCACTTC-TTTGGCTAAGTGATCCCTGCATCCTTCCTCAATATTCCTTCCCAGGCACCATATCAC-TGCCTGTAAGTCCCAAAATAGCCTGGTCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3860276 132 + 6579706 GTGAACATGGGAAAATTTTCTTGAGAGTGGAA-ATAAGAACCCAGCACCC--TTTAGCTAAGTCCTGTGC-C-TCTCTCCTCATTATTCCTTCCTGGGCCCCAGGTCAC-TGCCGCTAAGCCCG--AATATCCCTGTCTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=183219.000000 s hg38.chr3_KI270779v1_alt 82551 23 + 205312 AGCCCCGTAGTCCAGGCCTCAT-G s panTro5.chr3 200067913 23 + 202621043 AGCCCCGTAGTCCAGGCCTCAT-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 47985 23 + 190779 AGCCCCGTAGTCCAGGCCTCAT-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9932 23 + 106623 AGTCCCGTAGTCCAGGCCTCAT-G i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414311 23 + 204787373 AGCCCCGTAGTCCAGGCCTCAT-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21381 23 + 192460366 AGCCCCGTAGTCCAGGCCTCAT-A i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433068 23 + 16847902 AGCCCCGTAGTCCAGGCCTCAT-A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370680 22 - 91754291 AGCCCCGTAGT-CAGGCCTCAT-A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523800 23 - 1977891 AGCCCCGTAGTCCAGGCCTCAC-A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405353 23 + 7796314 AGCCCCGTAGTCCAGGCCTCGT-A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881343 22 - 74750902 AG-CCCGTAGTCCAGGCCTTAT-G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419931 23 + 17725628 AG-CCCGTAGTCCAGGCCTTATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378608 22 - 6778120 AG-CCCGTAGTCCAGGCCGTGA-G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34953 21 - 69927 AG-GCCGTAGT-GAGGCCTTAT-G i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7391947 22 + 22200726 -GCCCTGTAGCCCAGGCCTCAT-G i proCoq1.NW_012133858v1 C 0 I 238 s otoGar3.GL873829 384781 23 - 608964 GGCCCTGTATCCCTGGCCTCAT-G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29038623 17 + 31377067 AGCCCTGT------GGCCTCAC-G i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3860408 15 + 6579706 --------AGCCCAGACCTTGT-G i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=1596890.000000 s hg38.chr3_KI270779v1_alt 82574 197 + 205312 TTCAGGCTTTCTGTC-CCCAGTGATGAGAGGAGAGA--CGGCAGACCTGTCTCCGGTGAGCTCAGATGGGCCTCCC-GGAG-TCTCCTGGGGTGCACAGGATTTCAAAGATCCAGGAGG-CGCTGCCA-GGGGCTGTGAGGTCTGATGAACCTCTCACCTTCCCTCCCACACCTGCC-CTTTTC---------CT------GTTTCTGTGGATGCTTTTG s panTro5.chr3 200067936 197 + 202621043 TTCAGGCTTTCTGTC-CCCAGTGATGAGAGGAGAGG--CGGCAGACCTTTCTCTGGTGAGCTCAGATGGGCCTCCC-GGAG-TCTCCTGGGGTGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCA-GGGGCTGTGGGGTCTGATGAACCTCTCACCTTCCCTCCCACACCTGCC-CTTTTC---------CT------GTTTCTGTGGATGCTTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48008 197 + 190779 TTCAGGCTTTCTGTC-CCCAGTGATGAGAAGAGAGG--CGGCAGACCTTTCTCTGGTGAGCTCAGATGGGCCTCCC-GGAG-TCTCCTGGGGTGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCA-GGGGCTGTGGGGTCTGATGAACCTCTCACCTTCCCTCCCACACCTGCC-CTTTTC---------CT------GTTTCTGTGGATGCTTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 9955 186 + 106623 TTCAGGCTTTCTGTC-CCCAGTGATGAGAAG-------TGGCAGACCT-TGTCCGGTGAGCTCAGATGGGCCTCCC-GGAG-TCTCCTGGGGTGCACA-GATTTCAAAGATCCAGGAGG--GCTGCCA--GGGCTGTG-GGTCTGATG-ACCTCTCACCTTCCCTCCCACACCTGCC-CTTTTC---------CT------GTTTCTGTGGATGCTTTCC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414334 197 + 204787373 TTCAGGCTTTCTGTC-CCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCCGGTGAGCTCAGATGGGCCTCCT-GGAG-TCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCC-GGGGCTGTGGGGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCC-CTTTTC---------CT------GTTTCTGTGAATGCTTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21404 197 + 192460366 TTCAGGCTTTCTGTC-CCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCCGGTGAGCTCAGATGGGCCTCCT-GGAG-TCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCC-GGGGCTGTGGGGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCC-CTTTTC---------CT------GTTTCTGTGAATGCTTTCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433091 197 + 16847902 TTCAGGCTTTCTGTC-CCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCTGGTGAGCTCAGATGGGCCTCCT-GGAG-TCTCCTGGGGTGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCA-GGGGCTGTGGGGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCC-CTTTTC---------CC------GTTTCTGTGAATGCTTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370702 193 - 91754291 TTCAGGCTTTCTGTC-CCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTTTCCGGTGAGCTC----GGGCGTCCT-GGAG-TCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCA-GGGGCTGTGGGGTCTGATGAACCTCTCACACTCCCTCCCACACCTGCC-CTTTTC---------CC------GTTTCTGTGAATGCTTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 523823 197 - 1977891 TTCAGGCTTTCTGTC-CCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCTGGTGAGCTCAGATGGGCCTCCT-GGAG-TCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCA-GGGGCTGTGGGGTCTGAtgaacctctcacattccctcccacacctgcc-cttttc---------cc------gtttctgtgaatgctttcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405376 203 + 7796314 GTCAGGCTTTCTGTC-CCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCCCCGGTGAGCTCAGATGGGCCTCCT-GGAG-TCTCCTGGGACGCACAGGATTTCAAAGATCCAGGAGG-GGCTGCCA-GGGCCTGTGGGGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCC-CGTTTC---------CCGTTTCTGTTTCTGTGAATGCTTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881365 206 - 74750902 TTCAGGCTTCCTCTC-CCCAGAAATGAAAGGAGAGG--CGGCCGACCTTTCTCCAGTGAGCCCAGATGGGCCTCTG-GCAG-TCTCCTGGGGTGCATGGGATTTCCGAGATTGAGGAGGGGGCTTCCA-GGGGCTGTGGGGTCTGATGAACCAATCACTTTCCCTTCCACAGCTACC-C-TTTCTACCCTTTTCT------GTTTCTGTGGATGGTTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 419954 195 + 17725628 TTCAGGCTTCCTCT--CCCAGCGATGAAAGGAGAGG--CGGCCGGCCTTTCTCCAGTGAGCCCAG-TGGGCCTCTG-GGAG-TCTCCTGGGGTGCACAGGATTTCTGAGATCGAGGAGGGGGCTGCCA-GGGGCTGTGGGGTCTGATGAACCAATCACTTTCCCTTCCACACCTGCC-C-TTGC---------CT------GTTTCTGTGGATGGCTTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378630 196 - 6778120 TTCAGGCTTCCTCT--CCCAGCGACGAAAGGAGAAG--TGGCCGACCTTTCTCCAGTGAGCCCAGATGGGCCTCTG-GGAG-TCTCCTGGGGTGCACAGGATTTCCGAGATCGAGGAGGGGGCTGCCA-GGGGCTGTGCGGTCTGATGAACCAGTCACCTTCCCTTCCACACCTGCC-C-TTGC---------CT------GTTTCTGTGGGTGGCTTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 34974 197 - 69927 TTCAGGCTTCCTCTC-CCCAGCGATGAAAGGAGAGG--CAGCTGACCTTTCTCCGGTGAGCCCAGATGGGCCTCTG-GGAG-TCTCCTGAGGTGCACAGGATTTCCGAGATCGAGGAGGGGGCTGCCA-GGGGCTGCGGGGTCTGATGAGCCAGTCACTTTCCCTTCCACACCTACC-C-TTTC---------CT------GTTTCTGCGGCTGGTTTCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 384804 194 - 608964 TCCACCCCTTCTCT--TCCAATGGGCAGAGGAAAGG--CAG-GGGCCTTCCTCTGGTGAGCTAAGGTTGGCCTCCTGGGGG-TCACCTTGTGTGCA--GGATTTCAAAACTTTAGGAAGATGACGCCA-GGGACTTTGGGGTGTGGTAAGCCCATCACCTTTCCTCCCAGACCTGCT-CCTCTT---------CC-------TTTCTGCAAATGGTTTCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29038640 199 + 31377067 -CCTGCCCACCTCTCTTCCTAGAGTGAAAAGAGAGGGAAGGGGGACCTTCCTCTGGTGGGTTGGGACTGGCCTCCCAGGAG-TTTCCTTGTGTG---AGGATTTCATAGCTCCGGGAGGGTGAAGCCAGGGGGCTTTGGGGTCCGCTGAGCCCGTCGCCTTCCCTCTCAGACCTACT-CCTCCT---------CC------TGTTCCATGAATAGATCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3860423 196 + 6579706 -TCCACCCCCTTTTC-TTCCCAGGCAGAGGAAGAGG--CAG-AGGCTCTTCCCTGGAGGGCTAGAACTGGCCTCTC-GGGGATTTCCAGAGGTGCA--GGGTATCACAGCTCTAGGAGAGTGATGTTA-GGGGGGTTGGGATCTAATAAACCCATCTCCTTCCCCCTCAGACCTGCTGCTTCTC---------CT------GTTTCTGTTTCTGGTTCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7391969 238 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=605073.000000 s hg38.chr3_KI270779v1_alt 82771 55 + 205312 CTGTCC-T-TGGCTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- s panTro5.chr3 200068133 55 + 202621043 CTGTCC-T-TGGCTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48205 55 + 190779 CTGTCC-T-TGGCTTCCTGTAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10141 54 + 106623 CTGTCC-T-TGGCTTCCTGGAC----TCCAGACCTCAGGGTCATC-TTTGCTTCTCTCTGC---------------- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414531 54 + 204787373 CTGTCC---TGACTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21601 54 + 192460366 CTGTCC---TGACTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433288 54 + 16847902 CTGTCC---TGACTTCCTGGAC----TCCAGACCTCGGGGTCATTTTTTGCTTCTCTCTGC---------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370895 54 - 91754291 CTGTCC---TGACTTCCTGGAC----TCCAGCCCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524020 54 - 1977891 ctgtcc---tgacttcctggac----tccagacctcggggtcatcttttgcttctctctgc---------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405579 54 + 7796314 CTGTTC---TGACTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881571 55 - 74750902 CTGTCC-T-TGGCTTCCTGGAC----TCCAGGCCTCAGGGTCATCTTCTGCTTCTCTCTGC---------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420149 55 + 17725628 CTGTCC-T-TGGCTTCCTGGAC----TCCAGACCTCAGAGTCATCTTTTGCTTCTCTCTGC---------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378826 55 - 6778120 CCGTCC-T-TAGCTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTCGCTTCTCTCTGT---------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35171 55 - 69927 CTGTCT-T-TGGCTTCCTGGAC----TCCAGACCTCAGGGTCATCTTTTGCTTCTCTCTGC---------------- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7392207 55 + 22200726 CTGTCC-T-CAGCCTCCTGAAT----TCTAAACCTCAAGGTCATCTTTTGCTTCTCTCTGC---------------- i proCoq1.NW_012133858v1 I 238 I 53 s otoGar3.GL873829 384998 59 - 608964 CTGTCC-T-TGGCCTCCTGGACTCAGTCCAAACCTCAGGGTAATCTTTTGCTTCTCTTTGC---------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29038839 55 + 31377067 -TACCCTT-CAGCTTCCTGCAC----TCCAAGCCTCGGGATCTTCTTTTAATTCTCTCTGC---------------- i canFam3.chr33 C 0 I 17 s dasNov3.JH569502 3860619 71 + 6579706 -TATCC-TCCAGCCTCCTGGAC----TCCAAACCTCAGAGTAACCTTTTACTTCTTTCTGCCCTGGCCTTCCCCTTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=97072.000000 s hg38.chr3_KI270779v1_alt 82826 10 + 205312 AAGGTGCCAA s panTro5.chr3 200068188 10 + 202621043 AAGGTGCCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48260 10 + 190779 AAGGTGCCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10195 10 + 106623 AAGGTGCCAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414585 10 + 204787373 AAGGTGCCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21655 10 + 192460366 AAGGTGCCAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433342 10 + 16847902 AAGGTGCCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370949 10 - 91754291 AAGGTGCCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524074 10 - 1977891 aaggtgccaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405633 10 + 7796314 AAGGTGCCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881626 10 - 74750902 AAGTTGCCAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420204 10 + 17725628 AAGTTGCCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378881 10 - 6778120 GAGTTGCCAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35226 10 - 69927 GAGTTGCCAA i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29038911 10 + 31377067 AAGGTGCCAA i canFam3.chr33 I 17 C 0 s dasNov3.JH569502 3860690 10 + 6579706 AAGGTGCTGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e otoGar3.GL873829 385057 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e macNem1.NW_012014355v1 495334 1502 + 19675229 M e nomLeu3.chr11 120821431 0 + 123690457 C a score=52394.000000 s hg38.chr3_KI270779v1_alt 82836 9 + 205312 GTCTCTCTA s panTro5.chr3 200068198 9 + 202621043 GTCTCTCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48270 9 + 190779 GTCTCTCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10205 9 + 106623 GTCTCTCTA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414595 9 + 204787373 GTCTCTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21665 9 + 192460366 GTCTCTCTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433352 9 + 16847902 GTCTCTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370959 9 - 91754291 GTCTCTCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524084 9 - 1977891 gtctctcta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405643 9 + 7796314 GTCTCTCGA i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018503669v1 35236 9 - 69927 GTCTCTCTA i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29038921 9 + 31377067 GTCTTTCTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3860700 9 + 6579706 GACTTCCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e otoGar3.GL873829 385057 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e cebCap1.NW_016107444v1 378891 0 - 6778120 C e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C e nomLeu3.chr11 120821431 0 + 123690457 C a score=3332.000000 s hg38.chr3_KI270779v1_alt 82845 5 + 205312 GGttt s panTro5.chr3 200068207 5 + 202621043 Gtttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48279 5 + 190779 Gtttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10214 5 + 106623 Gtttt i gorGor5.CYUI01000576v1 C 0 C 0 s canFam3.chr33 29038930 5 + 31377067 GTTCT i canFam3.chr33 C 0 I 2307 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e otoGar3.GL873829 385057 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e aotNan1.NW_018503669v1 35245 0 - 69927 C e cebCap1.NW_016107444v1 378891 0 - 6778120 C e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C e colAng1.NW_012118932v1 405652 0 + 7796314 C e manLeu1.NW_012102020v1 524093 0 - 1977891 C e chlSab2.chr15 370968 0 - 91754291 C e cerAty1.NW_012004056v1 433361 0 + 16847902 C e macFas5.chr2 21674 0 + 192460366 C e rheMac8.chr2 202414604 0 + 204787373 C e nomLeu3.chr11 120821431 0 + 123690457 C a score=446489.000000 s hg38.chr3_KI270779v1_alt 82850 128 + 205312 ttgtttgtttgttttgttattgagacggagtctcactctattgcccaggctggagtgcagtggtgcgatctcagctcactgcaacttccgactccctggttcaagcaaattctcctgcctcagcctct s panTro5.chr3 200068212 128 + 202621043 ttgtttgtttgctttgtaattgagacggagtctcactctattgcccaggctggagtgcagtggtgtgatctcagctcactgcaacttccgactccctggttcaagcaaattctcctgcctcagcctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48284 128 + 190779 ttgtttgtttgctttgtaattgagacggagtctcactctattgcccaggctggagtgcagtggtgtgatctcagctcactgcaacttccgactccctggttcaagcaaattctcctgcctcagcctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10219 125 + 106623 ttgtctgtttgttt--ttattgagacggagtctcactctg-tgcccaggctggagtgcagtggtgcgatctcagctcactgcaacttccgactccctggttcaagcaaattctcctgcctcagcctct i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202414604 120 + 204787373 --Gtttg-----tttgttattgaggtggagtctcactgtactgcccaggctggagtgcagcagcgcgacctctgctcactgcaacctccaactccctggttcaagc-gattctcctgcctcagcctct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21674 125 + 192460366 --Gtttgtttgatttgttattgaggtggagtctcactgtactgcccaggctggagtgcagcagcacaacctctgctcactgcaacctccaactccctggttcaagt-gattctcctgcctcagcctct i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433361 125 + 16847902 --Gtttgtttgatttgttattgaggcggagtctcactgtactgcccaggctggagtgcagcggcgtgacctctgctcactgcaacctccaactccctggttcaagc-gattctcctgcctcagcctct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 370968 124 - 91754291 --Gtttgtttgatttgttattgaggcggagtctcactgtactgtccaggctggagtgcag-ggcgcgatctcagctcactgcaacctccaactccctggttcaagc-aattctcctgcctcagcctct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524093 125 - 1977891 --gtttgtttgatttgttattgaggcggagtctcactgtactgcccaggctggagtgcagcggcgtgacctctgctcactgcaacctccaactccctggttcaagc-gattctcctgcctcagcctct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405652 125 + 7796314 --Gtttgtttgatttgttattgaggtggagtctcactgtactgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctccaactccctggttcaagc-aattctcctgcctcagtctct i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e otoGar3.GL873829 385057 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35245 0 - 69927 C e cebCap1.NW_016107444v1 378891 0 - 6778120 C e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C e nomLeu3.chr11 120821431 0 + 123690457 C a score=264541.000000 s hg38.chr3_KI270779v1_alt 82978 69 + 205312 ggagtagctgggattacaggcgcccgccaccacgcctggc-----tatttttttttttttct-------agtagagatagg s panTro5.chr3 200068340 76 + 202621043 ggagtagctgggattacaggcgcccgccaccatgcctggc-----tattttttttttttttttttttaaagtagagatagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48412 72 + 190779 ggagtagctgggattacaggcgcccgccaccatgcctggt-----ctttttttttttttttt----ttaagtagagatagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10344 72 + 106623 ggagtagctgggattacaggtgcctgccaccacacctggc-----tatttttttaattgatt----tttagtagagatagg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821431 76 + 123690457 Ggagtagctgggattacaggtgcctgccaccacacctggc-----tattttttttttttattgatttttagtagagatagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414724 77 + 204787373 ggagtcgctgggattacaggcacccgccaccacagctggctttttttttttttttctggatt----tttagtagagatacg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21799 76 + 192460366 ggagtcgctgggattacaggcacccgccaccacagctggc-ttttttttttttttctggatt----tttagtagagatacg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433486 72 + 16847902 ggagtcgctgggattacaggcacccgccaccacagctggc-----ttttttttttctggatt----tttagtagagatacg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371092 72 - 91754291 ggagtcgctgggattacaggcgcccgccaccacagctggc-----ttttttttttctggatt----tttagtagagatacg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524218 72 - 1977891 gcagtcgctgggattacaggcacccgccaccacagctggc-----ttttttttttctggatt----tttagtagagatacg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405777 71 + 7796314 ggagtcactggcattacgggcacccgccaccacagctggc------tttttgtttctggatt----tttagtagagatagg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e otoGar3.GL873829 385057 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35245 0 - 69927 C e cebCap1.NW_016107444v1 378891 0 - 6778120 C e macNem1.NW_012014355v1 495334 1502 + 19675229 M e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C a score=195569.000000 s hg38.chr3_KI270779v1_alt 83047 33 + 205312 gtttcaccatgttggccaggctggtctcgatct s panTro5.chr3 200068416 33 + 202621043 gtttcaccatgttggccaggctggtctcgatct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48484 33 + 190779 gtttcaccatgttggccaggctggtctcgatct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10416 32 + 106623 g-ttcaccatgttggccaggctggtctcaatct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120821507 33 + 123690457 gtttcaccatgttggccaggctggtctcgatct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414801 33 + 204787373 gtttcaccatgttggtcaggctggtctcgatct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21875 33 + 192460366 gtttcaccatgttggccaggctggtctcgatct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 496837 33 + 19675229 gtttcaccatgttggccaggctggtctcgatca i macNem1.NW_012014355v1 M 1502 C 0 s cerAty1.NW_012004056v1 433558 33 + 16847902 gtttcaccatgttggccaggctggtctcgatct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371164 33 - 91754291 gtttcaccatgttggccaggctggtctcgatct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524290 33 - 1977891 gtttcaccatgttggccaggctggtctcgatct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405848 33 + 7796314 gtttcaccatgttgtccaggctggtctcgatct i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e otoGar3.GL873829 385057 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35245 0 - 69927 C e cebCap1.NW_016107444v1 378891 0 - 6778120 C e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C a score=58830.000000 s hg38.chr3_KI270779v1_alt 83080 8 + 205312 cctgacct s panTro5.chr3 200068449 8 + 202621043 cctgacct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48517 8 + 190779 cctgacct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10448 8 + 106623 cctgacct i gorGor5.CYUI01000576v1 C 0 I 7 s nomLeu3.chr11 120821540 8 + 123690457 cctgacct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414834 8 + 204787373 cctgacct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21908 8 + 192460366 cctgacct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 496870 8 + 19675229 cctgacct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433591 8 + 16847902 cctgacct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371197 8 - 91754291 cctgacct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524323 8 - 1977891 cctgacct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405881 8 + 7796314 cctgacct i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 385057 8 - 608964 CCTGGCCT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35245 0 - 69927 C e cebCap1.NW_016107444v1 378891 0 - 6778120 C e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C a score=279237.000000 s hg38.chr3_KI270779v1_alt 83088 65 + 205312 catgatccacccgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc s panTro5.chr3 200068457 65 + 202621043 catgatccacccgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcctggcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48525 65 + 190779 catgatccacccgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcctggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821548 65 + 123690457 tgtgatctgcccaccttggcctcccaaagtgctgggattacaggagtgagccactgtgcacggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414842 63 + 204787373 cgtgatccgcctgccttgg-ctcccaaag-gcggggaatacaggagtgagccacgggcccggACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21916 65 + 192460366 cgtgatccgcctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 496878 65 + 19675229 cctgatccacctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccagcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433599 65 + 16847902 cgtgatccgcctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgccctgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371205 65 - 91754291 cgtgatccacctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524331 65 - 1977891 cgtgatccgcctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405889 65 + 7796314 catgatccgcctgccttggcctcccaaaatgctgggattataggagtgagccactgtgcccggcc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 385065 19 - 608964 ------------------TCCTCTCCAAGT--------------------------TGCCAAG-- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35245 0 - 69927 C e cebCap1.NW_016107444v1 378891 0 - 6778120 C e calJac3.chr17 881636 0 - 74750902 C e saiBol1.JH378146 420214 0 + 17725628 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=79581.000000 s hg38.chr3_KI270779v1_alt 83153 9 + 205312 GTCTCTCTA s panTro5.chr3 200068522 9 + 202621043 GTCTCTCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48590 9 + 190779 GTCTCTCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821613 9 + 123690457 ATCTCTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414905 9 + 204787373 ATCTCTCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21981 9 + 192460366 ATCTCTCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 496943 9 + 19675229 ATCTCTCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433664 9 + 16847902 ATCTCTCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371270 9 - 91754291 ATCTCTCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524396 9 - 1977891 atctctcta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405954 9 + 7796314 ATCTCTCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881636 9 - 74750902 GTCTCTCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420214 9 + 17725628 GTCTCTCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378891 9 - 6778120 GTCTCTCTA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 385084 8 - 608964 -TCTTTCTA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35245 0 - 69927 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=168085.000000 s hg38.chr3_KI270779v1_alt 83162 18 + 205312 GTTTTACTTTGCAATGTC s panTro5.chr3 200068531 18 + 202621043 GTTTTACTTTGCAATGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48599 18 + 190779 GTTTTACTTTGCAATGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821622 18 + 123690457 GTTTTACTTTGCAATGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414914 18 + 204787373 GTTTTACTTTGCAATATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 21990 18 + 192460366 GTTTTACTTTGCAATATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 496952 18 + 19675229 GTTTTACTTTGCAATATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433673 18 + 16847902 GTTTTACTTTGCAATATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371279 18 - 91754291 GTTTTACTTTGCAATATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524405 18 - 1977891 gttttactttgcaatatc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405963 18 + 7796314 CTTTTACTTTGCAATATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881645 18 - 74750902 GTTTTACTTTGTAATATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420223 18 + 17725628 GTTTTACTCTGCAATATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378900 18 - 6778120 GTGTTGCTTCGCAATATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35245 18 - 69927 GTTTTACTTTGCAATATC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 385092 18 - 608964 GTTCTACTTCACAGCATT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392262 53 + 22200726 I e micMur3.chr1 25870769 322 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=674395.000000 s hg38.chr3_KI270779v1_alt 83180 57 + 205312 GTTCATATCCATCCCCTTTCTAGTGCCACTGCTGAAGTCCTAAGTCACTGCCTCCTA s panTro5.chr3 200068549 57 + 202621043 GTTCATATCCATCCCCTTTCTAGTGCCACTGCTGAAGTCCTAAGTCACTGCCTCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48617 57 + 190779 GTTCATATCCATCCCCTTTCTAGTGCCACTGCTGAAGTCCTAAGTCACTGCCTCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821640 57 + 123690457 GTTCATATCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTAGGTCATGGCCTCCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414932 57 + 204787373 GTTCATACCCATCCCCTTTCTAGTCGCGCTGCTGAAGTCCTGGGTCACGGCCTCCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22008 57 + 192460366 GTTCATACCCATCCCCTTTCTAGTCGCGCTGCTGAAGTCCTGGGTCACGGCCTCCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 496970 57 + 19675229 GTTCATACCCATCCCCTTTCTAGTCGCGCTGCTGAAGTCCTGGGTCACGGCCTCCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433691 57 + 16847902 GTTCATACCCATCCCCTTTCTAGTCCCGCTGTTGAAGTCCTGGGTGACGGCCCCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371297 57 - 91754291 GTTCATACCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTGGGTCACGGCCTCCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524423 57 - 1977891 attcatacccatcccctttctagtcccgctgttgaagtcctgggtcacggcctccta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 405981 57 + 7796314 ATTCATACCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTGGGTCACAGCCTCCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881663 56 - 74750902 GTTCATATCCATCCCC-TTCTAGTCCCACTGCTGAAGCCCTAGGTCACAGCCTCCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420241 57 + 17725628 ATTCATATCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTAGGTCACAGCCTCCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 378918 57 - 6778120 GTTCATATCCACCCCCTTTCTAGTCCCACTGCTGAAGTCCTAGGTCACAGCCTCCTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35263 56 - 69927 GTTAATATCCATCCCT-TTCTAGTCCCACTGCTGAAGTCCTAGGTCACAGCCTCCTA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25871091 57 - 114275543 GTTCACATCCACCCCCTTTCTAGACCCACTGCCTGAGTCCTAGGTCACAGCCTCCTA i micMur3.chr1 I 322 I 1634 s proCoq1.NW_012133858v1 7392315 57 + 22200726 GTTCACATCCACCCTCTTTCTAGACCCACTGCCACAGTCCTAGGTCACAGCCTCCTA i proCoq1.NW_012133858v1 I 53 C 0 s otoGar3.GL873829 385110 57 - 608964 GTTCACATCCATCATCTTTCTAAACCCACTGCTGAAGTCCTAGGTCACGGCCTCCTA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=17279.000000 s hg38.chr3_KI270779v1_alt 83237 3 + 205312 ACT s panTro5.chr3 200068606 3 + 202621043 ACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48674 3 + 190779 ACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821697 3 + 123690457 ACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414989 3 + 204787373 ACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22065 3 + 192460366 ACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497027 3 + 19675229 ACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433748 3 + 16847902 ACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371354 3 - 91754291 ACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524480 3 - 1977891 act i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406038 3 + 7796314 ACT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 378975 3 - 6778120 CCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35319 3 - 69927 CCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7392372 3 + 22200726 ACA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 385167 3 - 608964 ACA i otoGar3.GL873829 C 0 C 0 e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=17313.000000 s hg38.chr3_KI270779v1_alt 83240 3 + 205312 GGT s panTro5.chr3 200068609 3 + 202621043 GGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48677 3 + 190779 GGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202414992 3 + 204787373 GGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22068 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497030 3 + 19675229 GGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433751 3 + 16847902 GGT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524483 3 - 1977891 ggt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406041 3 + 7796314 GGT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 378978 3 - 6778120 GGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35322 3 - 69927 GAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7392375 3 + 22200726 GGT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 385170 3 - 608964 GGT i otoGar3.GL873829 C 0 C 0 e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=21725.000000 s hg38.chr3_KI270779v1_alt 83243 4 + 205312 CCTC s panTro5.chr3 200068612 4 + 202621043 CCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48680 4 + 190779 CCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202414995 4 + 204787373 CCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22071 4 + 192460366 CCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497033 4 + 19675229 CCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433754 4 + 16847902 CCCC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524486 4 - 1977891 cccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406044 4 + 7796314 CCCC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 378981 4 - 6778120 CCCC i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7392378 4 + 22200726 CCTC i proCoq1.NW_012133858v1 C 0 I 1499 s otoGar3.GL873829 385173 4 - 608964 CCTC i otoGar3.GL873829 C 0 C 0 e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=45904.000000 s hg38.chr3_KI270779v1_alt 83247 11 + 205312 CTGCCCT----AACT s panTro5.chr3 200068616 11 + 202621043 CTACCCT----AACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48684 11 + 190779 CTACCCT----AACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202414999 11 + 204787373 CTGCCCT----AACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22075 11 + 192460366 CTGCCCT----AACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497037 11 + 19675229 CTGCCCT----AACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433758 11 + 16847902 CTGCCCT----AACT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524490 11 - 1977891 ctgccct----aact i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406048 11 + 7796314 CTGCCCT----AACT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 378985 11 - 6778120 TTGCCCT----GACT i cebCap1.NW_016107444v1 C 0 I 38 s otoGar3.GL873829 385177 15 - 608964 TTGCCCTCCTGGACT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=12555.000000 s hg38.chr3_KI270779v1_alt 83258 4 + 205312 CCTC- s panTro5.chr3 200068627 4 + 202621043 CCTC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48695 4 + 190779 CCTC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415010 4 + 204787373 CCTC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22086 4 + 192460366 CCTC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497048 4 + 19675229 CCTC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433769 4 + 16847902 CCTC- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524501 4 - 1977891 cctc- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406059 4 + 7796314 CCTC- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 385192 4 - 608964 -CTCC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=17545.000000 s hg38.chr3_KI270779v1_alt 83262 6 + 205312 CCTGAC s panTro5.chr3 200068631 6 + 202621043 CCTGAC i panTro5.chr3 C 0 I 3 s panPan2.chrUn_NW_014024201v1 48699 6 + 190779 CCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415014 6 + 204787373 CCCGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22090 6 + 192460366 CCCGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497052 6 + 19675229 CCCGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433773 6 + 16847902 CCCGAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524505 6 - 1977891 cccgac i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 385196 6 - 608964 CCAGAC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=-4065.000000 s hg38.chr3_KI270779v1_alt 83268 4 + 205312 --CA--GT s rheMac8.chr2 202415020 2 + 204787373 --CG---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22096 2 + 192460366 --CG---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497058 2 + 19675229 --CG---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433779 2 + 16847902 --CA---- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524511 4 - 1977891 --cggt-- i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 385202 4 - 608964 CATA---- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48705 0 + 190779 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068637 3 + 202621043 I a score=1373.000000 s hg38.chr3_KI270779v1_alt 83272 6 + 205312 CCTCCA s panTro5.chr3 200068640 6 + 202621043 CCTCCT i panTro5.chr3 I 3 C 0 s manLeu1.NW_012102020v1 524515 6 - 1977891 ccccct i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 385206 6 - 608964 CTGCCA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48705 0 + 190779 C e macNem1.NW_012014355v1 497060 0 + 19675229 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433781 0 + 16847902 C e macFas5.chr2 22098 0 + 192460366 C e rheMac8.chr2 202415022 0 + 204787373 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=4329.000000 s hg38.chr3_KI270779v1_alt 83278 21 + 205312 GCCCTAAGTCTCCTCCCTGAC s panTro5.chr3 200068646 19 + 202621043 GCCCTAA--CTCCTCTCTGAC i panTro5.chr3 C 0 C 0 s manLeu1.NW_012102020v1 524521 19 - 1977891 gccctaa--ctcctccctgac i manLeu1.NW_012102020v1 C 0 I 28 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48705 0 + 190779 C e macNem1.NW_012014355v1 497060 0 + 19675229 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433781 0 + 16847902 C e macFas5.chr2 22098 0 + 192460366 C e rheMac8.chr2 202415022 0 + 204787373 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=100.000000 s hg38.chr3_KI270779v1_alt 83299 1 + 205312 C s panTro5.chr3 200068665 1 + 202621043 C i panTro5.chr3 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48705 0 + 190779 C e macNem1.NW_012014355v1 497060 0 + 19675229 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433781 0 + 16847902 C e macFas5.chr2 22098 0 + 192460366 C e rheMac8.chr2 202415022 0 + 204787373 C e nomLeu3.chr11 120821700 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=46562.000000 s hg38.chr3_KI270779v1_alt 83300 32 + 205312 TGTCCTCCTGCCCTAACTCCTCCCTGACCGGT s panTro5.chr3 200068666 32 + 202621043 AGTCCTCCTGCCCTGACTTCTCCCTGACCGAT i panTro5.chr3 C 0 T 58 s panPan2.chrUn_NW_014024201v1 48705 32 + 190779 TGGCCTCCTGCCCTAACTCCTCTCTGACCAGT i panPan2.chrUn_NW_014024201v1 C 0 T 29 s nomLeu3.chr11 120821700 3 + 123690457 -----------------------------GGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415022 31 + 204787373 -GTCCCCCTGCCCTAGCTCCTCCCCGACCGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22098 31 + 192460366 -GTCCCCCTGCCCTAGCTCCTCCCCGACCGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497060 31 + 19675229 -GTCCCCCTGCCCTAGCTCCTCCCCGACCGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433781 31 + 16847902 -GTCCCCCTGCCCTAACTCCTCCCCAACCGGT i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=33482.000000 s hg38.chr3_KI270779v1_alt 83332 42 + 205312 CCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068640 42 + 202621043 CCTCCTGCCCTAACTCCTCTCTGACCAGTCCTCCTGCCCTGA i panTro5.chr3 T 58 C 0 s panPan2.chrUn_NW_014024201v1 48708 42 + 190779 CCTCCTGCCCTAACTCCTCTCTGACCAGTCCTCCTGCCCTGA i panPan2.chrUn_NW_014024201v1 T 29 C 0 s nomLeu3.chr11 120821703 41 + 123690457 CCCCCTGCCCTAACTCCTCCCTGACTGG-CCTCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415053 13 + 204787373 CCCCCTGCCCTAG----------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22129 13 + 192460366 CCCCCTGCCCTAG----------------------------- i macFas5.chr2 C 0 T 29 s macNem1.NW_012014355v1 497091 13 + 19675229 CCTCCTGCCCTAG----------------------------- i macNem1.NW_012014355v1 C 0 T 58 s cerAty1.NW_012004056v1 433812 42 + 16847902 CCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=31913.000000 s hg38.chr3_KI270779v1_alt 83374 13 + 205312 CTCCTCCCTGACC s panTro5.chr3 200068682 13 + 202621043 CTTCTCCCTGACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48750 13 + 190779 CTTCTCCCTGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821744 13 + 123690457 CTCCTCCCTGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415066 13 + 204787373 CTCCTCCCCGACC i rheMac8.chr2 C 0 T 58 s macFas5.chr2 22113 13 + 192460366 CTCCTCCCCGACC i macFas5.chr2 T 29 C 0 s macNem1.NW_012014355v1 497046 13 + 19675229 CTCCTCCCCGACC i macNem1.NW_012014355v1 T 58 C 0 s cerAty1.NW_012004056v1 433854 13 + 16847902 CTCCTCCCCGACC i cerAty1.NW_012004056v1 C 0 T 58 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=143040.000000 s hg38.chr3_KI270779v1_alt 83387 62 + 205312 GATCCTCCTGCCCTAACTCCTCCCTGACCTGTCCTACTGCCCTAACTCCTCCCTGACCGGTC s panTro5.chr3 200068695 62 + 202621043 GATTTTCCTGCCCTAACTCCTCCCTGACCAGTCCCCCTGCCCTAACTCCTCCCTGACCGGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48763 62 + 190779 GATTTTCCTGCCCTAACTCCTCCCTGACCAGTCCCCCTGCCCTAACTCCTCCCTGACCGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821757 62 + 123690457 GGTCCCCCTGCCCTAACTCCTCCCTGACCCGTCCTCCTGCCCTAACTCCTCCCTGACCGGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415021 62 + 204787373 GGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTC i rheMac8.chr2 T 58 C 0 s macFas5.chr2 22126 62 + 192460366 GGTCCCCCTGCCCTAGCTCCTCCCGGACTGGTCCCCCTGCCCTAACTCCTCCCTGACTGGCC i macFas5.chr2 C 0 T 29 s macNem1.NW_012014355v1 497059 62 + 19675229 GGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCTCCTGCCCTAGCTCCTCCCCGACTGGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433809 62 + 16847902 GGTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAACTCCTCCCCGACCGGTC i cerAty1.NW_012004056v1 T 58 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=25966.000000 s hg38.chr3_KI270779v1_alt 83449 12 + 205312 CTCCTGCCCTAA s panTro5.chr3 200068757 12 + 202621043 CTCCAGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48825 12 + 190779 CTTCAGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821819 12 + 123690457 CCCCTGCCCTAA i nomLeu3.chr11 C 0 I 87 s rheMac8.chr2 202415083 12 + 204787373 CCCCTGCCCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22159 12 + 192460366 CCCCTGCCCTAA i macFas5.chr2 T 29 C 0 s macNem1.NW_012014355v1 497121 12 + 19675229 CCCCTGCCCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433871 12 + 16847902 CGCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=24444.000000 s hg38.chr3_KI270779v1_alt 83461 12 + 205312 CTCCTCCCTGAC s panTro5.chr3 200068769 12 + 202621043 CTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48837 12 + 190779 CTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415095 12 + 204787373 CTCCTCCCTGAC i rheMac8.chr2 C 0 T 114 s macFas5.chr2 22171 12 + 192460366 CTCCTCCCTGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497133 12 + 19675229 CTCCTCCCTGAC i macNem1.NW_012014355v1 C 0 T 114 s cerAty1.NW_012004056v1 433883 12 + 16847902 CTCCTCCCTGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821831 87 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=476.000000 s hg38.chr3_KI270779v1_alt 83473 1 + 205312 C s panTro5.chr3 200068781 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48849 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22183 1 + 192460366 T i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433895 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 T 58 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 114 + 204787373 T e nomLeu3.chr11 120821831 87 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2140.000000 s hg38.chr3_KI270779v1_alt 83474 4 + 205312 AGTC s panTro5.chr3 200068782 4 + 202621043 GGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48850 4 + 190779 CGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22184 4 + 192460366 GGCC i macFas5.chr2 C 0 T 130 s cerAty1.NW_012004056v1 433838 4 + 16847902 GGTC i cerAty1.NW_012004056v1 T 58 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 114 + 204787373 T e nomLeu3.chr11 120821831 87 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=3880.000000 s hg38.chr3_KI270779v1_alt 83478 14 + 205312 CTCCTGCCCTAAGT s panTro5.chr3 200068786 12 + 202621043 CTTCAGCCCTAA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48854 14 + 190779 CTCCTGCCCTAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s cerAty1.NW_012004056v1 433842 12 + 16847902 CCCCTGCCCTAA-- i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e rheMac8.chr2 202415107 114 + 204787373 T e nomLeu3.chr11 120821831 87 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=22569.000000 s hg38.chr3_KI270779v1_alt 83492 29 + 205312 CTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068798 29 + 202621043 CTCCTCCCTGACTGGTCCTCCTGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48868 29 + 190779 CTCCTCCCTGACCTGTCCTCCTGCCCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821918 28 + 123690457 CTCCTCCCTGACTGG-CCTCCTGCCCTAA i nomLeu3.chr11 I 87 T 115 s cerAty1.NW_012004056v1 433854 29 + 16847902 CTCCTCCCCGACCGGTCCGCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e rheMac8.chr2 202415107 114 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=573.000000 s hg38.chr3_KI270779v1_alt 83521 2 + 205312 GT s panTro5.chr3 200068827 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48897 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 0 + 16847902 C e macFas5.chr2 22188 130 + 192460366 T e rheMac8.chr2 202415107 114 + 204787373 T e nomLeu3.chr11 120821946 115 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2910.000000 s hg38.chr3_KI270779v1_alt 83523 3 + 205312 CTC s panTro5.chr3 200068829 3 + 202621043 CTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48899 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821831 3 + 123690457 CTC i nomLeu3.chr11 T 115 C 0 s cerAty1.NW_012004056v1 433883 3 + 16847902 CTC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e rheMac8.chr2 202415107 114 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=12020.000000 s hg38.chr3_KI270779v1_alt 83526 10 + 205312 CTCCCTGACC s panTro5.chr3 200068832 10 + 202621043 CTCCCTGACC i panTro5.chr3 C 0 T 205 s panPan2.chrUn_NW_014024201v1 48902 10 + 190779 CTCCCTGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821834 10 + 123690457 CTCCCTGACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 10 + 192460366 CCTCCTAACT i macFas5.chr2 T 130 C 0 s cerAty1.NW_012004056v1 433886 10 + 16847902 CTCCCTGACC i cerAty1.NW_012004056v1 C 0 T 144 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 114 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=-1294.000000 s hg38.chr3_KI270779v1_alt 83536 1 + 205312 -T s panTro5.chr3 200068637 1 + 202621043 -T i panTro5.chr3 T 205 C 0 s panPan2.chrUn_NW_014024201v1 48912 1 + 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 T 149 s nomLeu3.chr11 120821844 1 + 123690457 -T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22068 1 + 192460366 G- i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e rheMac8.chr2 202415107 114 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=147432.000000 s hg38.chr3_KI270779v1_alt 83537 64 + 205312 GTCCTCCTGCCCTAACTCCTCCCTGACCAGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTC s panTro5.chr3 200068638 64 + 202621043 GGCCTCCTGCCCTAACTCCTCTCTGACCAGTCCTCCTGCCCTGACTTCTCCCTGACCGATTTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48764 64 + 190779 ATTTTCCTGCCCTAACTCCTCCCTGACCAGTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCTT i panPan2.chrUn_NW_014024201v1 T 149 C 0 s nomLeu3.chr11 120821845 64 + 123690457 GTCCCCCTGCCCTAACTCCTCCCTGACCAGTCCCCCTGCCCTAACTCCTCCCTGACCCATCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414993 64 + 204787373 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCC i rheMac8.chr2 T 114 T 72 s macFas5.chr2 22069 64 + 192460366 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497031 64 + 19675229 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCTC i macNem1.NW_012014355v1 T 114 C 0 s cerAty1.NW_012004056v1 433752 64 + 16847902 GTCCCCCTGCCCTAACTCCTCCCCGACCAGTCCCCCTGCCCTAACTCCTCCCCAACCGGTCCCC i cerAty1.NW_012004056v1 T 144 I 29 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=38120.000000 s hg38.chr3_KI270779v1_alt 83601 24 + 205312 CAGCCCTAACTCCTCCCTGACCAG s panTro5.chr3 200068702 24 + 202621043 CTGCCCTAACTCCTCCCTGACCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48828 24 + 190779 CAGCCCTAACTCCTCCCTGACCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821909 24 + 123690457 CAGTCCTAACTCCTCCCTGACTGG i nomLeu3.chr11 C 0 I 115 s macFas5.chr2 22133 24 + 192460366 CTGCCCTAGCTCCTCCCGGACTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497095 24 + 19675229 CTGCCCTAGCTCCTCCCCGACTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433845 24 + 16847902 CTGCCCTAACTCCTCCCCGACCGG i cerAty1.NW_012004056v1 I 29 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1365.000000 s hg38.chr3_KI270779v1_alt 83625 1 + 205312 T s panTro5.chr3 200068726 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48852 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22157 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497119 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433869 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415057 72 + 204787373 T e nomLeu3.chr11 120821933 115 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=5877.000000 s hg38.chr3_KI270779v1_alt 83626 4 + 205312 CCTC s panTro5.chr3 200068727 4 + 202621043 CCCC i panTro5.chr3 C 0 I 153 s panPan2.chrUn_NW_014024201v1 48853 4 + 190779 CCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822048 4 + 123690457 CCTC i nomLeu3.chr11 I 115 C 0 s macFas5.chr2 22158 4 + 192460366 CCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497120 4 + 19675229 CCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433870 4 + 16847902 CCGC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=10230.000000 s hg38.chr3_KI270779v1_alt 83630 7 + 205312 CTGCCCT s panPan2.chrUn_NW_014024201v1 48857 7 + 190779 CTGCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822052 7 + 123690457 CTGCCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22162 7 + 192460366 CTGCCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497124 7 + 19675229 CTGCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433874 7 + 16847902 CTGCCCT i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068731 153 + 202621043 I a score=3822.000000 s hg38.chr3_KI270779v1_alt 83637 2 + 205312 AA s panTro5.chr3 200068884 2 + 202621043 AA i panTro5.chr3 I 153 C 0 s panPan2.chrUn_NW_014024201v1 48864 2 + 190779 AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822059 2 + 123690457 AA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22169 2 + 192460366 AA i macFas5.chr2 C 0 T 113 s macNem1.NW_012014355v1 497131 2 + 19675229 AA i macNem1.NW_012014355v1 C 0 T 110 s cerAty1.NW_012004056v1 433881 2 + 16847902 AA i cerAty1.NW_012004056v1 C 0 T 135 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1146.000000 s hg38.chr3_KI270779v1_alt 83639 2 + 205312 GT s panTro5.chr3 200068886 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48866 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 T 160 s nomLeu3.chr11 120822061 2 + 123690457 GT i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497133 110 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e macFas5.chr2 22171 113 + 192460366 T e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=873.000000 s hg38.chr3_KI270779v1_alt 83641 3 + 205312 CTC s panTro5.chr3 200068888 3 + 202621043 CTC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120822063 3 + 123690457 CTC i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48868 160 + 190779 T e macNem1.NW_012014355v1 497133 110 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e macFas5.chr2 22171 113 + 192460366 T e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=66.000000 s hg38.chr3_KI270779v1_alt 83644 3 + 205312 -CTC s panTro5.chr3 200068891 3 + 202621043 -CTC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120822066 3 + 123690457 -CTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 3 + 192460366 CCT- i macFas5.chr2 T 113 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48868 160 + 190779 T e macNem1.NW_012014355v1 497133 110 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e rheMac8.chr2 202415057 72 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=4659.000000 s hg38.chr3_KI270779v1_alt 83647 4 + 205312 CCTG s panTro5.chr3 200068894 4 + 202621043 CCTG i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120822069 4 + 123690457 CCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414985 4 + 204787373 CCTA i rheMac8.chr2 T 72 C 0 s macFas5.chr2 22061 4 + 192460366 CCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497023 4 + 19675229 CCTA i macNem1.NW_012014355v1 T 110 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48868 160 + 190779 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=9339.000000 s hg38.chr3_KI270779v1_alt 83651 6 + 205312 ACCGGT s panTro5.chr3 200068898 6 + 202621043 ACCTGT i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120822073 6 + 123690457 ACCGGT i nomLeu3.chr11 C 0 T 146 s rheMac8.chr2 202414989 6 + 204787373 ACTGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22065 6 + 192460366 ACTGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497027 6 + 19675229 ACTGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433748 6 + 16847902 ACCGGT i cerAty1.NW_012004056v1 T 135 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48868 160 + 190779 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=32388.000000 s hg38.chr3_KI270779v1_alt 83657 13 + 205312 CCTCCTGCCCTAA s panTro5.chr3 200068904 13 + 202621043 CCTCCTGCCCTGA i panTro5.chr3 C 0 T 194 s panPan2.chrUn_NW_014024201v1 48708 13 + 190779 CCTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 T 160 C 0 s nomLeu3.chr11 120821933 13 + 123690457 CCTCCTGCCCTAA i nomLeu3.chr11 T 146 C 0 s rheMac8.chr2 202414995 13 + 204787373 CCCCCTGCCCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22071 13 + 192460366 CCCCCTGCCCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497033 13 + 19675229 CCCCCTGCCCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433754 13 + 16847902 CCCCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=22248.000000 s hg38.chr3_KI270779v1_alt 83670 12 + 205312 CTCCTCCCTGAC s panPan2.chrUn_NW_014024201v1 48721 12 + 190779 CTCCTCTCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821946 12 + 123690457 CTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415008 12 + 204787373 CTCCTCCCCGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22084 12 + 192460366 CTCCTCCCCGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497046 12 + 19675229 CTCCTCCCCGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433767 12 + 16847902 CTCCTCCCCGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068917 194 + 202621043 T a score=168770.000000 s hg38.chr3_KI270779v1_alt 83682 75 + 205312 CGGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCAGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068723 75 + 202621043 CAGTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCTCCAGCCCTAACTCCTCCCTGACCGGTCCTTCAGCCCTAA i panTro5.chr3 T 194 T 158 s panPan2.chrUn_NW_014024201v1 48733 75 + 190779 CAGTCCTCCTGCCCTGACTTCTCCCTGACCGATTTTCCTGCCCTAACTCCTCCCTGACCAGTCCCCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120821958 75 + 123690457 CGGTCCCCCTGCCCTAACTCCTCCCTGACCAAGCCCCCTGCCCTAACTCCTCCCTGACCCAGCCCCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415020 75 + 204787373 CGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22096 75 + 192460366 CGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCGGACTGGTCCCCCTGCCCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497058 75 + 19675229 CGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCTCCTGCCCTAGCTCCTCCCCGACTGGTCCCCCTGCCCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433779 75 + 16847902 CAGTCCCCCTGCCCTAACTCCTCCCCAACCGGTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=23712.000000 s hg38.chr3_KI270779v1_alt 83757 12 + 205312 CTCCTCCCTGAC s panPan2.chrUn_NW_014024201v1 48808 12 + 190779 CTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822033 12 + 123690457 CTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415095 12 + 204787373 CTCCTCCCTGAC i rheMac8.chr2 C 0 T 58 s macFas5.chr2 22171 12 + 192460366 CTCCTCCCTGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497133 12 + 19675229 CTCCTCCCTGAC i macNem1.NW_012014355v1 C 0 T 58 s cerAty1.NW_012004056v1 433854 12 + 16847902 CTCCTCCCCGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068798 158 + 202621043 T a score=2205.000000 s hg38.chr3_KI270779v1_alt 83769 3 + 205312 CGG s panPan2.chrUn_NW_014024201v1 48820 3 + 190779 CGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822045 3 + 123690457 TGG i nomLeu3.chr11 C 0 I 324 s macFas5.chr2 22183 3 + 192460366 TGG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433866 3 + 16847902 CGG i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 58 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 58 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068798 158 + 202621043 T a score=180.000000 s hg38.chr3_KI270779v1_alt 83772 1 + 205312 T s panPan2.chrUn_NW_014024201v1 48823 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22186 1 + 192460366 C i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433869 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 58 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 58 + 204787373 T e nomLeu3.chr11 120822048 324 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068798 158 + 202621043 T a score=1000.000000 s hg38.chr3_KI270779v1_alt 83773 1 + 205312 C s panTro5.chr3 200068640 1 + 202621043 C i panTro5.chr3 T 158 C 0 s panPan2.chrUn_NW_014024201v1 48824 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22187 1 + 192460366 C i macFas5.chr2 C 0 T 29 s cerAty1.NW_012004056v1 433870 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 58 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 58 + 204787373 T e nomLeu3.chr11 120822048 324 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1000.000000 s hg38.chr3_KI270779v1_alt 83774 1 + 205312 C s panTro5.chr3 200068641 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48825 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22159 1 + 192460366 C i macFas5.chr2 T 29 C 0 s cerAty1.NW_012004056v1 433871 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 58 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 58 + 204787373 T e nomLeu3.chr11 120822048 324 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=28493.000000 s hg38.chr3_KI270779v1_alt 83775 23 + 205312 TCCAGCCCTAACTCCTCCCTGAC s panTro5.chr3 200068642 23 + 202621043 TCCTGCCCTAACTCCTCTCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48826 23 + 190779 TTCAGCCCTAACTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822372 23 + 123690457 CCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 I 324 C 0 s macFas5.chr2 22160 23 + 192460366 CCCTGCCCTAACTCCTCCCTGAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433872 23 + 16847902 GCCTGCCCTAACTCCTCCCTGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 58 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 58 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1883.000000 s hg38.chr3_KI270779v1_alt 83798 1 + 205312 C s panTro5.chr3 200068665 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48849 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822395 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415049 1 + 204787373 C i rheMac8.chr2 T 58 C 0 s macFas5.chr2 22183 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497087 1 + 19675229 C i macNem1.NW_012014355v1 T 58 C 0 s cerAty1.NW_012004056v1 433895 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 T 116 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=3359.000000 s hg38.chr3_KI270779v1_alt 83799 4 + 205312 AGTC s panTro5.chr3 200068666 4 + 202621043 AGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48850 4 + 190779 CGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822396 4 + 123690457 CGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415050 4 + 204787373 GGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22184 4 + 192460366 GGCC i macFas5.chr2 C 0 T 34 s macNem1.NW_012014355v1 497088 4 + 19675229 GGTC i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2255.000000 s hg38.chr3_KI270779v1_alt 83803 2 + 205312 CT s panTro5.chr3 200068670 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48854 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 T 29 s nomLeu3.chr11 120822400 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415054 2 + 204787373 CC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 497092 2 + 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e macFas5.chr2 22188 34 + 192460366 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=6015.000000 s hg38.chr3_KI270779v1_alt 83805 6 + 205312 CCTCCC s panTro5.chr3 200068672 6 + 202621043 CCTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48827 6 + 190779 TCAGCC i panPan2.chrUn_NW_014024201v1 T 29 C 0 s nomLeu3.chr11 120822402 6 + 123690457 CCTGCC i nomLeu3.chr11 C 0 T 360 s rheMac8.chr2 202415056 6 + 204787373 CCTGCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 497094 6 + 19675229 CCTGCC i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e macFas5.chr2 22188 34 + 192460366 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=12912.000000 s hg38.chr3_KI270779v1_alt 83811 16 + 205312 CTAACTCCTCCCTGAC s panTro5.chr3 200068678 16 + 202621043 CTGACTTCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48833 16 + 190779 CTAACTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415062 16 + 204787373 CTAGCTCCTCCCCGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 497100 16 + 19675229 CTAGCTCCTCCCCGAC i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e macFas5.chr2 22188 34 + 192460366 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=18797.000000 s hg38.chr3_KI270779v1_alt 83827 17 + 205312 CCGTCCTCCTGCCCTAA s panTro5.chr3 200068694 17 + 202621043 CGATTTTCCTGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48849 17 + 190779 CCGTCCTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 T 116 s rheMac8.chr2 202415078 17 + 204787373 CGGTCCCCCTGCCCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22154 17 + 192460366 TGGTCCCCCTGCCCTAA i macFas5.chr2 T 34 C 0 s macNem1.NW_012014355v1 497116 17 + 19675229 TGGTCCCCCTGCCCTAA i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=16805.000000 s hg38.chr3_KI270779v1_alt 83844 12 + 205312 CTCCTCCCTGAC s panTro5.chr3 200068711 12 + 202621043 CTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48750 12 + 190779 CTTCTCCCTGAC i panPan2.chrUn_NW_014024201v1 T 116 C 0 s rheMac8.chr2 202415095 12 + 204787373 CTCCTCCCTGAC i rheMac8.chr2 C 0 T 87 s macFas5.chr2 22171 12 + 192460366 CTCCTCCCTGAC i macFas5.chr2 C 0 T 125 s macNem1.NW_012014355v1 497133 12 + 19675229 CTCCTCCCTGAC i macNem1.NW_012014355v1 C 0 T 106 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=600.000000 s hg38.chr3_KI270779v1_alt 83856 1 + 205312 C s panTro5.chr3 200068723 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48762 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415020 1 + 204787373 C i rheMac8.chr2 T 87 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 106 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 116 + 16847902 T e macFas5.chr2 22183 125 + 192460366 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=13342.000000 s hg38.chr3_KI270779v1_alt 83857 19 + 205312 TGTCCTCCAGCCCTAACTC s panTro5.chr3 200068724 19 + 202621043 AGTCCCCCTGCCCTAACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48763 19 + 190779 GATTTTCCTGCCCTAACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415021 19 + 204787373 GGTCCCCCTGCCCTAGCTC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433780 19 + 16847902 AGTCCCCCTGCCCTAACTC i cerAty1.NW_012004056v1 T 116 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 106 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22183 125 + 192460366 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=20055.000000 s hg38.chr3_KI270779v1_alt 83876 19 + 205312 CTCCCTGACCAGTCCTCCA s panTro5.chr3 200068743 19 + 202621043 CTCCCTGACCGGTCCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48782 19 + 190779 CTCCCTGACCAGTCCCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415040 19 + 204787373 CTCCCCGACCGGTCCCCCT i rheMac8.chr2 C 0 T 2 s macFas5.chr2 22058 19 + 192460366 CCTCCTAACTGGTCCCCCT i macFas5.chr2 T 125 C 0 s cerAty1.NW_012004056v1 433799 19 + 16847902 CTCCCCAACCGGTCCCCCT i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 106 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=35260.000000 s hg38.chr3_KI270779v1_alt 83895 27 + 205312 GCCCTAACTCCTCCCTGACCGGTCCTA s panTro5.chr3 200068762 27 + 202621043 GCCCTAACTCCTCCCTGACCGGTCCTT i panTro5.chr3 C 0 T 58 s panPan2.chrUn_NW_014024201v1 48801 27 + 190779 GCCCTAACTCCTCCCTGACCGGTCCTT i panPan2.chrUn_NW_014024201v1 C 0 T 29 s macFas5.chr2 22077 27 + 192460366 GCCCTAACTCCTCCCCGACCGGTCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497039 27 + 19675229 GCCCTAACTCCTCCCCGACCGGTCCCC i macNem1.NW_012014355v1 T 106 C 0 s cerAty1.NW_012004056v1 433818 27 + 16847902 GCCCTAACTCCTCCCCGACCGGTCCCC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415059 2 + 204787373 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=43941.000000 s hg38.chr3_KI270779v1_alt 83922 23 + 205312 CTGCCCTAACTCCTCCCTGACCG s panTro5.chr3 200068731 23 + 202621043 CTGCCCTAACTCCTCCCTGACCG i panTro5.chr3 T 58 I 165 s panPan2.chrUn_NW_014024201v1 48799 23 + 190779 CTGCCCTAACTCCTCCCTGACCG i panPan2.chrUn_NW_014024201v1 T 29 C 0 s rheMac8.chr2 202415057 23 + 204787373 CTGCCCTAGCTCCTCCCCGACCG i rheMac8.chr2 T 2 C 0 s macFas5.chr2 22104 23 + 192460366 CTGCCCTAGCTCCTCCCCGACCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497066 23 + 19675229 CTGCCCTAGCTCCTCCCCGACCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433845 23 + 16847902 CTGCCCTAACTCCTCCCCGACCG i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=17228.000000 s hg38.chr3_KI270779v1_alt 83945 15 + 205312 GTCCTCCTGCCCTAA s panPan2.chrUn_NW_014024201v1 48822 15 + 190779 GTCCTTCAGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415080 15 + 204787373 GTCCCCCTGCCCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22127 15 + 192460366 GTCCCCCTGCCCTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497089 15 + 19675229 GTCCTCCTGCCCTAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433868 15 + 16847902 GTCCGCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068754 165 + 202621043 I a score=22593.000000 s hg38.chr3_KI270779v1_alt 83960 12 + 205312 CTCCTCCCTGAC s panTro5.chr3 200068919 12 + 202621043 CTCCTCCCTGAC i panTro5.chr3 I 165 C 0 s panPan2.chrUn_NW_014024201v1 48837 12 + 190779 CTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415095 12 + 204787373 CTCCTCCCTGAC i rheMac8.chr2 C 0 T 99 s macFas5.chr2 22142 12 + 192460366 CTCCTCCCGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497104 12 + 19675229 CTCCTCCCCGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433883 12 + 16847902 CTCCTCCCTGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=443.000000 s hg38.chr3_KI270779v1_alt 83972 1 + 205312 C s panTro5.chr3 200068931 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48849 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22154 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497116 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433895 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 T 144 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 99 + 204787373 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=-2928.000000 s hg38.chr3_KI270779v1_alt 83973 1 + 205312 -A s panTro5.chr3 200068932 1 + 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48850 1 + 190779 -C i panPan2.chrUn_NW_014024201v1 C 0 I 62 s macFas5.chr2 22155 1 + 192460366 G- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497117 1 + 19675229 G- i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e rheMac8.chr2 202415107 99 + 204787373 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=22467.000000 s hg38.chr3_KI270779v1_alt 83974 29 + 205312 GTCCTCCTGCCCTAAGTCTCCTCCCTGAC s panTro5.chr3 200068933 29 + 202621043 GTCCTCCTGCCCTGAGTCTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48913 29 + 190779 GTCCTCCTGCCCTGAGTCTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 I 62 C 0 s macFas5.chr2 22156 27 + 192460366 GTCCCCCTGCCCTAA--CTCCTCCCTGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497118 27 + 19675229 GTCCCCCTGCCCTAA--CTCCTCCCTGAC i macNem1.NW_012014355v1 C 0 T 114 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e rheMac8.chr2 202415107 99 + 204787373 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1587.000000 s hg38.chr3_KI270779v1_alt 84003 4 + 205312 CGGT s panTro5.chr3 200068962 4 + 202621043 CGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48942 4 + 190779 CGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22183 4 + 192460366 TGGC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e rheMac8.chr2 202415107 99 + 204787373 T e nomLeu3.chr11 120822408 360 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1000.000000 s hg38.chr3_KI270779v1_alt 84007 1 + 205312 C s panTro5.chr3 200068966 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48946 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822048 1 + 123690457 C i nomLeu3.chr11 T 360 C 0 s macFas5.chr2 22187 1 + 192460366 C i macFas5.chr2 C 0 T 130 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e rheMac8.chr2 202415107 99 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=8076.000000 s hg38.chr3_KI270779v1_alt 84008 14 + 205312 CTCCTGCCCTAAGT s panTro5.chr3 200068967 14 + 202621043 CTCCTGCCCTAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48947 14 + 190779 CTCCTGCCCTAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822049 14 + 123690457 CTCCTGCCCTAAGT i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e macFas5.chr2 22188 130 + 192460366 T e rheMac8.chr2 202415107 99 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2910.000000 s hg38.chr3_KI270779v1_alt 84022 3 + 205312 CTC s panTro5.chr3 200068981 3 + 202621043 CTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48961 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822063 3 + 123690457 CTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415008 3 + 204787373 CTC i rheMac8.chr2 T 99 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e macFas5.chr2 22188 130 + 192460366 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=11410.000000 s hg38.chr3_KI270779v1_alt 84025 10 + 205312 CTCCCTGACC s panTro5.chr3 200068984 10 + 202621043 CTCCCTGACC i panTro5.chr3 C 0 T 357 s panPan2.chrUn_NW_014024201v1 48964 10 + 190779 CTCCCTGACC i panPan2.chrUn_NW_014024201v1 C 0 T 269 s nomLeu3.chr11 120822066 10 + 123690457 CTCCCTGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415011 10 + 204787373 CTCCCCGACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22058 10 + 192460366 CCTCCTAACT i macFas5.chr2 T 130 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=-3649.000000 s hg38.chr3_KI270779v1_alt 84035 1 + 205312 -T s panTro5.chr3 200068637 1 + 202621043 -T i panTro5.chr3 T 357 C 0 s panPan2.chrUn_NW_014024201v1 48705 1 + 190779 -T i panPan2.chrUn_NW_014024201v1 T 269 C 0 s nomLeu3.chr11 120822076 1 + 123690457 -G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415021 1 + 204787373 G- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22068 1 + 192460366 G- i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 114 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433896 144 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=169684.000000 s hg38.chr3_KI270779v1_alt 84036 73 + 205312 GTCCTCCTGCCCTAACTCCTCCCTGACCAGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068638 73 + 202621043 GGCCTCCTGCCCTAACTCCTCTCTGACCAGTCCTCCTGCCCTGACTTCTCCCTGACCGATTTTCCTGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48706 73 + 190779 GGCCTCCTGCCCTAACTCCTCTCTGACCAGTCCTCCTGCCCTGACTTCTCCCTGACCGATTTTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 I 77 s nomLeu3.chr11 120822077 73 + 123690457 GTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCCCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415022 73 + 204787373 GTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22069 73 + 192460366 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497031 73 + 19675229 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCTCCTGCCCTAG i macNem1.NW_012014355v1 T 114 C 0 s cerAty1.NW_012004056v1 433752 73 + 16847902 GTCCCCCTGCCCTAACTCCTCCCCGACCAGTCCCCCTGCCCTAACTCCTCCCCAACCGGTCCCCCTGCCCTAA i cerAty1.NW_012004056v1 T 144 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=22225.000000 s hg38.chr3_KI270779v1_alt 84109 12 + 205312 CTCCTCCCTGAC s panTro5.chr3 200068711 12 + 202621043 CTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120822150 12 + 123690457 CTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415095 12 + 204787373 CTCCTCCCTGAC i rheMac8.chr2 C 0 T 122 s macFas5.chr2 22142 12 + 192460366 CTCCTCCCGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497104 12 + 19675229 CTCCTCCCCGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433825 12 + 16847902 CTCCTCCCCGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48779 77 + 190779 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=4180.000000 s hg38.chr3_KI270779v1_alt 84121 7 + 205312 GAATCCC s panTro5.chr3 200068723 7 + 202621043 CAGTCCC i panTro5.chr3 C 0 C 0 s macFas5.chr2 22154 7 + 192460366 TGGTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497116 7 + 19675229 TGGTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433837 7 + 16847902 CGGTCCC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48779 77 + 190779 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 122 + 204787373 T e nomLeu3.chr11 120822162 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=14460.000000 s hg38.chr3_KI270779v1_alt 84128 10 + 205312 CCTGCCCTAA s panTro5.chr3 200068730 10 + 202621043 CCTGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48856 10 + 190779 CCTGCCCTAA i panPan2.chrUn_NW_014024201v1 I 77 C 0 s macFas5.chr2 22161 10 + 192460366 CCTGCCCTAA i macFas5.chr2 C 0 T 113 s macNem1.NW_012014355v1 497123 10 + 19675229 CCTGCCCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433844 10 + 16847902 CCTGCCCTAA i cerAty1.NW_012004056v1 C 0 T 58 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 122 + 204787373 T e nomLeu3.chr11 120822162 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=191.000000 s hg38.chr3_KI270779v1_alt 84138 2 + 205312 GT s panPan2.chrUn_NW_014024201v1 48866 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497133 0 + 19675229 C e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433854 58 + 16847902 T e macFas5.chr2 22171 113 + 192460366 T e rheMac8.chr2 202415107 122 + 204787373 T e nomLeu3.chr11 120822162 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068740 0 + 202621043 C a score=2910.000000 s hg38.chr3_KI270779v1_alt 84140 3 + 205312 CTC s panTro5.chr3 200068740 3 + 202621043 CTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48868 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macNem1.NW_012014355v1 497133 3 + 19675229 CTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433796 3 + 16847902 CTC i cerAty1.NW_012004056v1 T 58 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22171 113 + 192460366 T e rheMac8.chr2 202415107 122 + 204787373 T e nomLeu3.chr11 120822162 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=10163.000000 s hg38.chr3_KI270779v1_alt 84143 9 + 205312 CTCCCTGAC s panTro5.chr3 200068743 9 + 202621043 CTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48871 9 + 190779 CTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22058 9 + 192460366 CCTCCTAAC i macFas5.chr2 T 113 C 0 s macNem1.NW_012014355v1 497136 9 + 19675229 CTCCCTGAC i macNem1.NW_012014355v1 C 0 T 122 s cerAty1.NW_012004056v1 433799 9 + 16847902 CTCCCCAAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 122 + 204787373 T e nomLeu3.chr11 120822162 0 + 123690457 C e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=17717.000000 s hg38.chr3_KI270779v1_alt 84152 17 + 205312 CGGTCCTCCTGCCCTAA s panTro5.chr3 200068752 17 + 202621043 CGGTCCTCCAGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48880 17 + 190779 CTGTCCTCCTGCCCTGA i panPan2.chrUn_NW_014024201v1 C 0 T 89 s nomLeu3.chr11 120822162 17 + 123690457 CCAGCCCCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22067 17 + 192460366 TGGTCCCCCTGCCCTAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433808 17 + 16847902 CGGTCCCCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 122 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 122 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=67677.000000 s hg38.chr3_KI270779v1_alt 84169 58 + 205312 CTCCTCCCTGACCGGTCCTCCTGCCCTAACTCCTCCCTGACCAGTCCTCCTGCCCTAA s panTro5.chr3 200068769 58 + 202621043 CTCCTCCCTGACCGGTCCTTCAGCCCTAACTCCTCCCTGACTGGTCCTCCTGCCCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48808 58 + 190779 CTCCTCCCTGACCGGTCCTTCAGCCCTAACTCCTCCCTGACCCGTCCTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 T 89 C 0 s nomLeu3.chr11 120822179 57 + 123690457 CTCCTCCCTGACCCAGCCCCCTGCCCTAACTCCTCCCTGACTGG-CCTCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22084 58 + 192460366 CTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433825 58 + 16847902 CTCCTCCCCGACCGGTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCGCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 T 135 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 122 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e rheMac8.chr2 202415107 122 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=3816.000000 s hg38.chr3_KI270779v1_alt 84227 5 + 205312 GTCTC s panTro5.chr3 200068827 5 + 202621043 GTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48866 5 + 190779 GTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822236 5 + 123690457 GTCTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22142 3 + 192460366 --CTC i macFas5.chr2 C 0 T 87 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 122 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e rheMac8.chr2 202415107 122 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=670.000000 s hg38.chr3_KI270779v1_alt 84232 3 + 205312 -CTC s panTro5.chr3 200068832 3 + 202621043 -CTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48871 3 + 190779 -CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822241 3 + 123690457 -CTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 3 + 192460366 CCT- i macFas5.chr2 T 87 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 122 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e rheMac8.chr2 202415107 122 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=11124.000000 s hg38.chr3_KI270779v1_alt 84235 7 + 205312 CCTGACC s panTro5.chr3 200068835 7 + 202621043 CCTGACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48874 7 + 190779 CCTGACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822244 7 + 123690457 CCTGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414985 7 + 204787373 CCTAACT i rheMac8.chr2 T 122 C 0 s macFas5.chr2 22061 7 + 192460366 CCTAACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497023 7 + 19675229 CCTAACT i macNem1.NW_012014355v1 T 122 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371357 0 - 91754291 C e cerAty1.NW_012004056v1 433883 135 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=5571.000000 s hg38.chr3_KI270779v1_alt 84242 3 + 205312 GGT s panTro5.chr3 200068842 3 + 202621043 TGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48881 3 + 190779 TGT i panPan2.chrUn_NW_014024201v1 C 0 T 176 s nomLeu3.chr11 120822251 3 + 123690457 GGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414992 3 + 204787373 GGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22068 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497030 3 + 19675229 GGT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 371357 3 - 91754291 GGT i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e cerAty1.NW_012004056v1 433883 135 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=54898.000000 s hg38.chr3_KI270779v1_alt 84245 23 + 205312 CCTCCTGCCCTAACTCCTCCCTG s panTro5.chr3 200068845 23 + 202621043 CCTCCAGCCCTAACTCCTCCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48708 23 + 190779 CCTCCTGCCCTAACTCCTCTCTG i panPan2.chrUn_NW_014024201v1 T 176 C 0 s nomLeu3.chr11 120822254 23 + 123690457 CCCCCTGCCCTAACTCCTCCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202414995 23 + 204787373 CCCCCTGCCCTAACTCCTCCCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22071 23 + 192460366 CCCCCTGCCCTAACTCCTCCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497033 23 + 19675229 CCCCCTGCCCTAACTCCTCCCCG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 371360 23 - 91754291 CCCCCTGCCCTAACTCCTCGCCG i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e cerAty1.NW_012004056v1 433883 135 + 16847902 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=51352.000000 s hg38.chr3_KI270779v1_alt 84268 16 + 205312 ACCGGTCCTCCTGCCC s panTro5.chr3 200068868 16 + 202621043 ACTGGTCCTCCTGCCC i panTro5.chr3 C 0 T 244 s panPan2.chrUn_NW_014024201v1 48731 16 + 190779 ACCAGTCCTCCTGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822277 16 + 123690457 ACTGGTCCCCCTGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415018 16 + 204787373 ACCGGTCCCCCTGCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22094 16 + 192460366 ACCGGTCCCCCTGCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497056 16 + 19675229 ACCGGTCCCCCTGCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433748 16 + 16847902 ACCGGTCCCCCTGCCC i cerAty1.NW_012004056v1 T 135 C 0 s chlSab2.chr15 371383 16 - 91754291 ACCGGTCCCCCTGCCC i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=34891.000000 s hg38.chr3_KI270779v1_alt 84284 18 + 205312 TAACTCCTCCCTGACCAA s panPan2.chrUn_NW_014024201v1 48747 18 + 190779 TGACTTCTCCCTGACCGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822293 18 + 123690457 TAACTCCTCCCTGACTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415034 18 + 204787373 TAGCTCCTCCCCGACCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22110 18 + 192460366 TAGCTCCTCCCCGACCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497072 18 + 19675229 TAGCTCCTCCCCGACCGG i macNem1.NW_012014355v1 C 0 T 58 s cerAty1.NW_012004056v1 433764 18 + 16847902 TAACTCCTCCCCGACCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371399 18 - 91754291 TAACTCCTTGCTGACCAC i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068884 244 + 202621043 T a score=2548.000000 s hg38.chr3_KI270779v1_alt 84302 1 + 205312 T s panPan2.chrUn_NW_014024201v1 48765 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 T 58 s nomLeu3.chr11 120822311 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415052 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22128 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497032 1 + 19675229 T i macNem1.NW_012014355v1 T 58 C 0 s cerAty1.NW_012004056v1 433782 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371417 1 - 91754291 T i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068884 244 + 202621043 T a score=75233.000000 s hg38.chr3_KI270779v1_alt 84303 26 + 205312 CCCCCTGCCCTAACTCCTCCCTGACC s panTro5.chr3 200068640 26 + 202621043 CCTCCTGCCCTAACTCCTCTCTGACC i panTro5.chr3 T 244 C 0 s panPan2.chrUn_NW_014024201v1 48708 26 + 190779 CCTCCTGCCCTAACTCCTCTCTGACC i panPan2.chrUn_NW_014024201v1 T 58 C 0 s nomLeu3.chr11 120822312 26 + 123690457 CCTCCTACCCTAACTCATCCCTGACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415053 26 + 204787373 CCCCCTGCCCTAGCTCCTCCCCGACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22129 26 + 192460366 CCCCCTGCCCTAGCTCCTCCCGGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497033 26 + 19675229 CCCCCTGCCCTAACTCCTCCCCGACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433783 26 + 16847902 CCCCCTGCCCTAACTCCTCCCCAACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371418 26 - 91754291 CCCCCTGCCCTAACTCCTCGCTGACC i chlSab2.chr15 C 0 I 28 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2655.000000 s hg38.chr3_KI270779v1_alt 84329 3 + 205312 AAT s panTro5.chr3 200068666 3 + 202621043 AGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48734 3 + 190779 AGT i panPan2.chrUn_NW_014024201v1 C 0 T 29 s nomLeu3.chr11 120822338 3 + 123690457 CGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415079 3 + 204787373 GGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22155 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497059 3 + 19675229 GGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433809 3 + 16847902 GGT i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=61406.000000 s hg38.chr3_KI270779v1_alt 84332 25 + 205312 CCCCCTGCCCTAACTCCTCCCTGAC s panTro5.chr3 200068669 25 + 202621043 CCTCCTGCCCTGACTTCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48708 25 + 190779 CCTCCTGCCCTAACTCCTCTCTGAC i panPan2.chrUn_NW_014024201v1 T 29 C 0 s nomLeu3.chr11 120822341 25 + 123690457 CCCCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415082 25 + 204787373 CCCCCTGCCCTAACTCCTCCCTGAC i rheMac8.chr2 C 0 T 58 s macFas5.chr2 22158 25 + 192460366 CCCCCTGCCCTAACTCCTCCCTGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497062 25 + 19675229 CCCCCTGCCCTAGCTCCTCCCCGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433812 25 + 16847902 CCCCCTGCCCTAACTCCTCCCCGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=9226.000000 s hg38.chr3_KI270779v1_alt 84357 5 + 205312 CGGTC s panTro5.chr3 200068694 5 + 202621043 CGATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48733 5 + 190779 CAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822366 5 + 123690457 CGGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415049 5 + 204787373 CGGTC i rheMac8.chr2 T 58 C 0 s macFas5.chr2 22183 5 + 192460366 TGGCC i macFas5.chr2 C 0 T 34 s macNem1.NW_012014355v1 497087 5 + 19675229 CGGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433837 5 + 16847902 CGGTC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=40960.000000 s hg38.chr3_KI270779v1_alt 84362 24 + 205312 CTCCTCCCCTAACTCCTCCCTGAC s panTro5.chr3 200068699 24 + 202621043 TTCCTGCCCTAACTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48738 24 + 190779 CTCCTGCCCTGACTTCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822371 24 + 123690457 CCCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415054 24 + 204787373 CCCCTGCCCTAGCTCCTCCCCGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 497092 24 + 19675229 CTCCTGCCCTAGCTCCTCCCCGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433842 24 + 16847902 CCCCTGCCCTAACTCCTCCCCGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 34 + 192460366 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=66606.000000 s hg38.chr3_KI270779v1_alt 84386 29 + 205312 CTGTCCTCCTGCCCTAACTCCTCCCTGAC s panTro5.chr3 200068723 29 + 202621043 CAGTCCCCCTGCCCTAACTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48762 29 + 190779 CGATTTTCCTGCCCTAACTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822395 29 + 123690457 CCGGCCTCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202415078 29 + 204787373 CGGTCCCCCTGCCCTAACTCCTCCCTGAC i rheMac8.chr2 C 0 T 28 s macFas5.chr2 22154 29 + 192460366 TGGTCCCCCTGCCCTAACTCCTCCCTGAC i macFas5.chr2 T 34 C 0 s macNem1.NW_012014355v1 497116 29 + 19675229 TGGTCCCCCTGCCCTAACTCCTCCCTGAC i macNem1.NW_012014355v1 C 0 T 41 s cerAty1.NW_012004056v1 433866 29 + 16847902 CGGTCCGCCTGCCCTAACTCCTCCCTGAC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2788.000000 s hg38.chr3_KI270779v1_alt 84415 3 + 205312 CGG s panTro5.chr3 200068752 3 + 202621043 CGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48791 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822424 3 + 123690457 TGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22183 3 + 192460366 TGG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433895 3 + 16847902 CGG i cerAty1.NW_012004056v1 C 0 T 131 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1422.000000 s hg38.chr3_KI270779v1_alt 84418 2 + 205312 TC s panTro5.chr3 200068755 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48794 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822427 2 + 123690457 TC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22186 2 + 192460366 CC i macFas5.chr2 C 0 T 144 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=11624.000000 s hg38.chr3_KI270779v1_alt 84420 24 + 205312 CTCCAGCCCTAACTCCTCCCTGAC s panTro5.chr3 200068757 24 + 202621043 CTCCAGCCCTAACTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48796 24 + 190779 CCCCTGCCCTAACTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822429 24 + 123690457 GTCCTACCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 T 116 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e macFas5.chr2 22188 144 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=13804.000000 s hg38.chr3_KI270779v1_alt 84444 29 + 205312 CCGTCCTCCAGCCCTAACTCCTCCCTGAC s panTro5.chr3 200068781 29 + 202621043 CGGTCCTTCAGCCCTAACTCCTCCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48820 29 + 190779 CGGTCCTTCAGCCCTAACTCCTCCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822337 29 + 123690457 CCGGCCCCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 T 116 T 147 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e macFas5.chr2 22188 144 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=19890.000000 s hg38.chr3_KI270779v1_alt 84473 41 + 205312 CTGTCCTCCTGCCCTAAGTCTCCTCCCTGACCAGTCCTCCT s panTro5.chr3 200068810 41 + 202621043 TGGTCCTCCTGCCCTAAGTCTCCTCCCTGACCTGTCCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48849 41 + 190779 CCGTCCTCCTGCCCTAAGTCTCCTCCCTGACCTGTCCTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822219 41 + 123690457 CTGGCCTCCTGCCCTAAGTCTCCTCCCTGACCGGTCCCCCT i nomLeu3.chr11 T 147 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e macFas5.chr2 22188 144 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=4386.000000 s hg38.chr3_KI270779v1_alt 84514 5 + 205312 GCCCT s panTro5.chr3 200068851 5 + 202621043 GCCCT i panTro5.chr3 C 0 I 28 s panPan2.chrUn_NW_014024201v1 48890 5 + 190779 GCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822260 5 + 123690457 GCCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22044 5 + 192460366 GTCCT i macFas5.chr2 T 144 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=9767.000000 s hg38.chr3_KI270779v1_alt 84519 20 + 205312 AAGTCTC--CTCCCTGACCGGT s panTro5.chr3 200068884 20 + 202621043 AAGTCTC--CTCCCTGACCTGT i panTro5.chr3 I 28 C 0 s panPan2.chrUn_NW_014024201v1 48895 20 + 190779 GAGTCTC--CTCCCTGACCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822265 18 + 123690457 --AACTC--CTCCCTGACTGGT i nomLeu3.chr11 C 0 T 75 s macFas5.chr2 22049 22 + 192460366 GGGTCACGGCCTCCTAACTGGT i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=20632.000000 s hg38.chr3_KI270779v1_alt 84539 44 + 205312 CCTCCTGCCCTAAGTCTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068904 44 + 202621043 CCTCCTGCCCTGAGTCTCCTCCCTGACCTGTCCTCCTGCCCTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48915 44 + 190779 CCTCCTGCCCTGAGTCTCCTCCCTGACCGGTCCTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22071 42 + 192460366 CCCCCTGCCCTAA--CTCCTCCCCGACCGGTCCCCCTGCCCTAG i macFas5.chr2 C 0 T 55 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=573.000000 s hg38.chr3_KI270779v1_alt 84583 2 + 205312 GT s panTro5.chr3 200068948 2 + 202621043 GT i panTro5.chr3 C 0 T 196 s panPan2.chrUn_NW_014024201v1 48959 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 T 182 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433898 131 + 16847902 T e macFas5.chr2 22113 55 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=873.000000 s hg38.chr3_KI270779v1_alt 84585 3 + 205312 CTC s panPan2.chrUn_NW_014024201v1 48779 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 T 182 C 0 s cerAty1.NW_012004056v1 433767 3 + 16847902 CTC i cerAty1.NW_012004056v1 T 131 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22113 55 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068950 196 + 202621043 T a score=4107.000000 s hg38.chr3_KI270779v1_alt 84588 11 + 205312 CTCCCTGACCA s panPan2.chrUn_NW_014024201v1 48782 11 + 190779 CTCCCTGACCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22058 11 + 192460366 CCTCCTAACTG i macFas5.chr2 T 55 C 0 s cerAty1.NW_012004056v1 433770 11 + 16847902 CTCCCCGACCA i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I e panTro5.chr3 200068950 196 + 202621043 T a score=56560.000000 s hg38.chr3_KI270779v1_alt 84599 73 + 205312 GTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCAGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068754 73 + 202621043 GTCCTCCAGCCCTAACTCCTCCCTGACCGGTCCTTCAGCCCTAACTCCTCCCTGACTGGTCCTCCTGCCCTAA i panTro5.chr3 T 196 C 0 s panPan2.chrUn_NW_014024201v1 48793 73 + 190779 GTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCTTCAGCCCTAACTCCTCCCTGACCCGTCCTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22069 66 + 192460366 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCT------- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 433781 73 + 16847902 GTCCCCCTGCCCTAACTCCTCCCCAACCGGTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAA i cerAty1.NW_012004056v1 C 0 I 13 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=5267.000000 s hg38.chr3_KI270779v1_alt 84672 19 + 205312 GTCTCCTCCCTGACCCGTC s panTro5.chr3 200068827 19 + 202621043 GTCTCCTCCCTGACCTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48866 19 + 190779 GTCTCCTCCCTGACCTGTC i panPan2.chrUn_NW_014024201v1 C 0 I 45 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22135 0 + 192460366 C e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1957.000000 s hg38.chr3_KI270779v1_alt 84691 12 + 205312 CTCCAGCCCTAA s panTro5.chr3 200068846 12 + 202621043 CTCCAGCCCTAA i panTro5.chr3 C 0 C 0 s macFas5.chr2 22135 7 + 192460366 -----GCCCTAG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e panPan2.chrUn_NW_014024201v1 48885 45 + 190779 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=13708.000000 s hg38.chr3_KI270779v1_alt 84703 26 + 205312 CTCCTCCCTGACCGGTCCTCCTGCCC s panTro5.chr3 200068858 26 + 202621043 CTCCTCCCTGACTGGTCCTCCTGCCC i panTro5.chr3 C 0 I 92 s panPan2.chrUn_NW_014024201v1 48930 26 + 190779 CTCCTCCCTGACCGGTCCTCCTGCCC i panPan2.chrUn_NW_014024201v1 I 45 C 0 s macFas5.chr2 22142 26 + 192460366 CTCCTCCCGGACTGGTCCCCCTGCCC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1638.000000 s hg38.chr3_KI270779v1_alt 84729 3 + 205312 TAA s panTro5.chr3 200068976 3 + 202621043 TAA i panTro5.chr3 I 92 C 0 s panPan2.chrUn_NW_014024201v1 48956 3 + 190779 TAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22168 3 + 192460366 TAA i macFas5.chr2 C 0 T 29 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=573.000000 s hg38.chr3_KI270779v1_alt 84732 2 + 205312 GT s panTro5.chr3 200068979 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48959 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822283 75 + 123690457 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=14904.000000 s hg38.chr3_KI270779v1_alt 84734 29 + 205312 CTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro5.chr3 200068981 29 + 202621043 CTCCTCCCTGACCGGTCCTCCTGCCCTAA i panTro5.chr3 C 0 T 31 s panPan2.chrUn_NW_014024201v1 48961 29 + 190779 CTCCTCCCTGACCGGTCCTCCTGCCCTAA i panPan2.chrUn_NW_014024201v1 C 0 T 124 s nomLeu3.chr11 120822208 28 + 123690457 CTCCTCCCTGACTGG-CCTCCTGCCCTAA i nomLeu3.chr11 T 75 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=15906.000000 s hg38.chr3_KI270779v1_alt 84763 29 + 205312 GTCTCCTCCCTGACCGGTCCTCCTGCCCT s panTro5.chr3 200068979 29 + 202621043 GTCTCCTCCCTGACCGGTCCTCCTGCCCT i panTro5.chr3 T 31 T 124 s panPan2.chrUn_NW_014024201v1 48866 29 + 190779 GTCTCCTCCCTGACCTGTCCTCCTGCCCT i panPan2.chrUn_NW_014024201v1 T 124 C 0 s nomLeu3.chr11 120822236 29 + 123690457 GTCTCCTCCCTGACCGGTCCCCCTGCCCT i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2471.000000 s hg38.chr3_KI270779v1_alt 84792 21 + 205312 AAGTCTCCTCCCTGACCAGTA s panTro5.chr3 200068884 21 + 202621043 AAGTCTCCTCCCTGACCTGTC i panTro5.chr3 T 124 C 0 s panPan2.chrUn_NW_014024201v1 48895 21 + 190779 GAGTCTCCTCCCTGACCTGTC i panPan2.chrUn_NW_014024201v1 C 0 T 31 s nomLeu3.chr11 120822265 2 + 123690457 AA------------------- i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=9469.000000 s hg38.chr3_KI270779v1_alt 84813 28 + 205312 CTCCTGCCCTAAGTCTCCTCCCTGACCG s panTro5.chr3 200068905 28 + 202621043 CTCCTGCCCTGAGTCTCCTCCCTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48885 28 + 190779 CTCCTGCCCTGAGTCTCCTCCCTGACCT i panPan2.chrUn_NW_014024201v1 T 31 C 0 s nomLeu3.chr11 120822267 14 + 123690457 --------------CTCCTCCCTGACTG i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860709 0 + 6579706 C e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=18456.000000 s hg38.chr3_KI270779v1_alt 84841 36 + 205312 GTCCTCCTGCCCTAAGTC--------TCCTCCCTGACTGGTCCT s panTro5.chr3 200068933 36 + 202621043 GTCCTCCTGCCCTGAGTC--------TCCTCCCTGACCGGTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48913 36 + 190779 GTCCTCCTGCCCTGAGTC--------TCCTCCCTGACCGGTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822281 34 + 123690457 GTCCCCCTGCCCTAA--C--------TCCTCCCTGACTGGTCCT i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 3860709 44 + 6579706 GTTCTACTGCACGATGTCACTCATATTCATCCCTTTACATTCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e colAng1.NW_012118932v1 406063 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=5881.000000 s hg38.chr3_KI270779v1_alt 84877 12 + 205312 CCTGC------CCTAAGT s panTro5.chr3 200068969 12 + 202621043 CCTGC------CCTAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48949 12 + 190779 CCTGC------CCTAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120822315 11 + 123690457 CCTAC------CCTAAC- i nomLeu3.chr11 C 0 I 8191 s colAng1.NW_012118932v1 406063 10 + 7796314 CCTGC------CCTAA-- i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3860753 18 + 6579706 ACTGCTGGAGTCCTAGGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497145 41 + 19675229 T e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e macFas5.chr2 22171 29 + 192460366 T e rheMac8.chr2 202415107 28 + 204787373 T e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=12434.000000 s hg38.chr3_KI270779v1_alt 84889 10 + 205312 ---CTCCTCCCTG s panTro5.chr3 200068981 10 + 202621043 ---CTCCTCCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48961 10 + 190779 ---CTCCTCCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22142 10 + 192460366 ---CTCCTCCCGG i macFas5.chr2 T 29 C 0 s macNem1.NW_012014355v1 497104 10 + 19675229 ---CTCCTCCCCG i macNem1.NW_012014355v1 T 41 C 0 s colAng1.NW_012118932v1 406073 10 + 7796314 ---CTCCTCCCTG i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3860771 12 + 6579706 CACCTCCTCTTA- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e calJac3.chr17 881719 0 - 74750902 C e saiBol1.JH378146 420298 0 + 17725628 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=6306.000000 s hg38.chr3_KI270779v1_alt 84899 3 + 205312 ACT s panTro5.chr3 200068991 3 + 202621043 ACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48971 3 + 190779 ACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 22152 3 + 192460366 ACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497114 3 + 19675229 ACT i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 406083 3 + 7796314 ACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881719 2 - 74750902 -CC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 420298 2 + 17725628 -CC i saiBol1.JH378146 C 0 I 1 s dasNov3.JH569502 3860783 3 + 6579706 ACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433854 13 + 16847902 I e rheMac8.chr2 202415107 28 + 204787373 T e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=14785.000000 s hg38.chr3_KI270779v1_alt 84902 3 + 205312 GGT s panTro5.chr3 200068994 3 + 202621043 GGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48974 3 + 190779 GGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415079 3 + 204787373 GGT i rheMac8.chr2 T 28 C 0 s macFas5.chr2 22155 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497117 3 + 19675229 GGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433867 3 + 16847902 GGT i cerAty1.NW_012004056v1 I 13 C 0 s colAng1.NW_012118932v1 406086 3 + 7796314 GGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881722 3 - 74750902 GGT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 420301 3 + 17725628 GGT i saiBol1.JH378146 I 1 C 0 s dasNov3.JH569502 3860786 3 + 6579706 GGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35325 0 - 69927 C e cebCap1.NW_016107444v1 378996 38 - 6778120 I e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=177681.000000 s hg38.chr3_KI270779v1_alt 84905 37 + 205312 CCTCCTGCCCTA-ACTCCTCCCTGACTGGCCTCCATCC s panTro5.chr3 200068997 37 + 202621043 CCTCCTGCCCTA-ACTCCTCCCTGACTGGCCTCCATCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 48977 37 + 190779 CCTCCTGCCCTA-ACTCCTCCCTGACTGGCCTCCATCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415082 37 + 204787373 CCCCCTGCCCTA-ACTCCTCCCTGACTGGCCTCTGTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22158 37 + 192460366 CCCCCTGCCCTA-ACTCCTCCCTGACTGGCCTCTGTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497120 37 + 19675229 CCCCCTGCCCTA-ACTCCTCCCTGACTGGCCTCTGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433870 37 + 16847902 CCGCCTGCCCTA-ACTCCTCCCTGACCGGCCTCTGTCC i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 406089 37 + 7796314 CCGCCTGCCCTA-ACTCCTCCCTGACTGGCCTCTGTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881725 37 - 74750902 CCTCTCGCCCTA-ACTCTTCCCTTGCTGGCCTCCGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420304 37 + 17725628 CCTCTTGACCTA-ACTCTTCCCTTCCTGGCCTCCGCCC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 35325 37 - 69927 CCTCTTGCCCTA-ACTCTTCCGTTACTGGCCTCCGCCC i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 3860789 35 + 6579706 ---CCTGCCCCAGACTCTCCCCTAAGTGGTCTCTGCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385212 0 - 608964 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e cebCap1.NW_016107444v1 378996 38 - 6778120 I e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=66746.000000 s hg38.chr3_KI270779v1_alt 84942 10 + 205312 AAGCAGAGCT s panTro5.chr3 200069034 10 + 202621043 TAGCAGAGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49014 10 + 190779 TAGCAGAGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415119 10 + 204787373 AAGCAGAGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22195 10 + 192460366 AAGCAGAGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497157 10 + 19675229 AAGCAGAGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433907 10 + 16847902 AAGCAGAGCT i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 406126 10 + 7796314 AAGCAGAGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881762 10 - 74750902 AAGCAGAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420341 10 + 17725628 AAGCAGAGCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 35362 10 - 69927 AAGCAGAGCT i aotNan1.NW_018503669v1 C 0 I 7 s otoGar3.GL873829 385212 10 - 608964 AAGCAGAGCT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3860824 10 + 6579706 AGGTAGAGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e cebCap1.NW_016107444v1 378996 38 - 6778120 I e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=3087.000000 s hg38.chr3_KI270779v1_alt 84952 26 + 205312 TGAGTATTGCTGGTTCCCTGCTCAAA s panTro5.chr3 200069044 26 + 202621043 TGAGTATTGCTGGTTCCCTGCTCAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49024 26 + 190779 TGAGTATTGCTGGTTCCCTGCTCAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415129 6 + 204787373 TGAGTA-------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22205 6 + 192460366 TGAGTA-------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497167 6 + 19675229 TGAGTA-------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433917 6 + 16847902 TGAGTA-------------------- i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 406136 22 + 7796314 TGAGTATTGCTAGTTCCCTGCT---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881772 6 - 74750902 CTGGTA-------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420351 6 + 17725628 CTGGCA-------------------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 385222 26 - 608964 CTGGTGTTGCTGGCTCTCCCCTCAAA i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3860834 26 + 6579706 CTGGTGTTGCCAGTTCCCTGCTCAAA i dasNov3.JH569502 C 0 I 1617 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35372 7 - 69927 I e cebCap1.NW_016107444v1 378996 38 - 6778120 I e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1389.000000 s hg38.chr3_KI270779v1_alt 84978 9 + 205312 CCCACCACT s panTro5.chr3 200069070 9 + 202621043 CCCACCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49050 9 + 190779 CCCACCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s otoGar3.GL873829 385248 2 - 608964 CC------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65403054 1021 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35372 7 - 69927 I e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497173 0 + 19675229 C e calJac3.chr17 881778 0 - 74750902 C e saiBol1.JH378146 420357 0 + 17725628 C e colAng1.NW_012118932v1 406158 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433923 0 + 16847902 C e macFas5.chr2 22211 0 + 192460366 C e rheMac8.chr2 202415135 0 + 204787373 C e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=1200.000000 s hg38.chr3_KI270779v1_alt 84987 2 + 205312 GG s panTro5.chr3 200069079 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49059 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s mm10.chr16 65404075 2 - 98207768 GG i mm10.chr16 I 1021 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385250 0 - 608964 C e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35372 7 - 69927 I e cebCap1.NW_016107444v1 378996 38 - 6778120 I e macNem1.NW_012014355v1 497173 0 + 19675229 C e calJac3.chr17 881778 0 - 74750902 C e saiBol1.JH378146 420357 0 + 17725628 C e colAng1.NW_012118932v1 406158 0 + 7796314 C e manLeu1.NW_012102020v1 524540 28 - 1977891 I e chlSab2.chr15 371444 28 - 91754291 I e cerAty1.NW_012004056v1 433923 0 + 16847902 C e macFas5.chr2 22211 0 + 192460366 C e rheMac8.chr2 202415135 0 + 204787373 C e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2104.000000 s hg38.chr3_KI270779v1_alt 84989 1 + 205312 T s panTro5.chr3 200069081 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49061 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415135 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22211 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497173 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433923 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 524568 1 - 1977891 t i manLeu1.NW_012102020v1 I 28 C 0 s calJac3.chr17 881778 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420357 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65404077 1 - 98207768 C i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385250 0 - 608964 C e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e aotNan1.NW_018503669v1 35372 7 - 69927 I e cebCap1.NW_016107444v1 378996 38 - 6778120 I e colAng1.NW_012118932v1 406158 0 + 7796314 C e chlSab2.chr15 371444 28 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=539910.000000 s hg38.chr3_KI270779v1_alt 84990 72 + 205312 TGCTGGttccctgctcaaacccaccactggcactggcttcccatcacatacagaataaaggctaaatgtctg s panTro5.chr3 200069082 72 + 202621043 TGCTGGttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatatcta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49062 72 + 190779 TGCTGGttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatatcta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202415136 72 + 204787373 tgctagttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgccta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22212 72 + 192460366 tgctagttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgccta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497174 72 + 19675229 tgctagttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgccta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433924 72 + 16847902 TGCTAGTTCCCTGCTCAAACCCACCACTGGCACTGGCTTCCCATCACCTACAGAATAAAGGCTAAATGCCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371472 72 - 91754291 tgctagtttcctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgccta i chlSab2.chr15 I 28 C 0 s manLeu1.NW_012102020v1 524569 72 - 1977891 tgctagttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgccta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406158 57 + 7796314 ---------------CAAACCCACCACTGGCACTGGCTTCCCATCACCTACAGAATAAAGGCTAAATGCCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881779 72 - 74750902 TGCTGGTTTCCTGCTCAAACCCACCACTGGAACTGGCTTCCCATCATCTACAGAAGAAAGGCTGAACGCCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420358 71 + 17725628 TGCTGTTTCCCTGCTCAAACCCCGAGCCGGAACTGGCTTCCCGTCACCTACAGAATAAAGGCT-AACGCCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379034 71 - 6778120 tgctgtttccctgctcaaacccaccactggaact-gcttcccatcacctacggaataaaggctgaacgcctg i cebCap1.NW_016107444v1 I 38 C 0 s aotNan1.NW_018503669v1 35379 72 - 69927 TGCTGGttccctgctcagaccccccactggaagtggcttcccatcgtctatagaataaaggctgaatgccta i aotNan1.NW_018503669v1 I 7 C 0 s otoGar3.GL873829 385250 44 - 608964 -------TCCCT--------------------CCAGCTTTCCCTCATCTACAGAATAAA-GCTCAGCTCCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65404078 67 - 98207768 AGCCAGCTCCCTGTTGAGA-----GGCCATCAATGGCTTCCCATTCTCGACAGACTAGATGTGAAAGTACTG i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 10456 7 + 106623 I a score=2524947.000000 s hg38.chr3_KI270779v1_alt 85062 287 + 205312 tgcttggcacagaaagtcatcaaca----ggccccagagcacgtttctggtgttatcttctgctaatgccctgccc----tcactcctatgctgcagcTGAATGGAACGAGCCATTATCC---------CCTCAG-------------------GAACGCTGGCTTCTCAGTAAACGATTATAGCCCAGAAGCTCTGTCATCACAGAACCTAGCTATTGGCTAATGGGTCAGCTTTGGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----gggt-gacagggacagagggag s panTro5.chr3 200069154 287 + 202621043 cgcttggcatagaaagtcataaaca----ggccccagagcacgtttctggtgttatcttctgctaatgccctgccc----tcactcctatgctgcagcTGAATGGAACGAGCCATTATCC---------CCTCGG-------------------GAACGCTGGCTTCTCAGTAAACGATTATAGCCCAGAAGCCCTGTCATCACAGAACCTAGCTATTGGCTAATGGGTCAGCTTTAGCTTCATTTCTCTGAAtaacttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----gggt-gacagggacagagggag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49134 287 + 190779 cgcttggcatagaaagtcataaaca----ggccccagagcacgtttttggtgttatcttctgctaatgccctgccc----tcactcctatgctgcagcTGAATGGAACGAGCCATTATCC---------CCTCGG-------------------GAACGCTGGCTTCTCAGTAAACGATTATAGCCCAGAAGCCCTGTCATCACAGAACCTAGCTATTGGCTAATGGGTCAGCTTTAGCTTCATTTCTCTGAAtaacttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----gggt-gacagggacagagggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10463 285 + 106623 TGCTTGGCACAGAAAGTCATCAGCA----GGCCCCAGAGCACGTTTCTGGTGTTATCTTCTGCTAACGCCCTGCAC----CCACTCCTATGCTGCAGCTGAAT-GAACGAGCCATTATCC---------CCTC-G-------------------GAACGCTGGCTTCTCAGTAAATGATTATAGCCCAGAAGCCCTGTCATCACAGAACCCAGCTATTGGCTAATGGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----gggt-gacagggacagagggag i gorGor5.CYUI01000576v1 I 7 C 0 s rheMac8.chr2 202415208 288 + 204787373 cacttggcacagaaagtcatcaaca----ggccccagtgcccatttctggccttatcttctgctaatgccctgcac----ccactcccatgcggtagctgaatggaaagagccattatcc---------cctcgg-------------------gaacacTGGCTTCTCTGTAAATGATTATAGCCCGGAAACCCTGTCAGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----ggggagacagggacagagggag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22284 288 + 192460366 cacttggcacagaaagtcatcaaca----ggccccagtgcccatttctggccttatcttctgctaatgccctgcac----ccactccCATGCGGTAGCTGAATGGAAAGAGCCATTATCC---------CCTCGG-------------------GAACACTGGCTTCTCTGTAAATGATTATAGCCCGGAAACCCTGTCAGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----ggggagacagggacagagggag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497246 288 + 19675229 cacttggcacagaaagtcatcaaca----ggccccagtgcccatttctggccttatcttctgctaatgccctgcac----ccactcccatgcggtagctgaatggaaagagccattatcc---------ccttgg-------------------gaacacTGGCTTCTCCGTAAATGATTATAGCCCGGAAACCCTGTCAGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----ggggagacagggacagagggag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 433996 289 + 16847902 CACTTAGCACAGAAAGTCATCAACA----ggccccagtgcccatttctggccttatcttctgctaatgccctgcac----ccactcccatgcggtagccgaatggaaagagccattatcc---------cctcgg-------------------gaacacTGGCTTCTCCGTAAATGATTATAGCCCAGAAACCCTGTCGGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggagggggg-gggggaaaagggggg-----ggggagacagggacagagggag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371544 286 - 91754291 cacttggcacagaaagtcatcaaca----ggccccagtgcccatttctggccttatcatctgctaatgccccgcac----ccactccTATGCGGTAGGCGAATGGAAAGAGCCGTTATCC---------CCTCGG-------------------GAACACCGGCTTCTCAGTAAATGATTATAGCCAG--AACCCTGTCGGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggaaaa-gggga-----ggggagacagggacagagggag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524641 288 - 1977891 cacttggcacagaaagtcatcaaca----ggccccagtgcccatttctggccttatcttctgctaatgccctgcac----ccactcccatgcggtagccgaatggaaagagccattatcc---------cctcgg-------------------gaacacAGGCTTCTCCGTAAATGATTATAGCCTGGAAACCCTGTTGGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaataagg-ttaggaaaa-gggga-----ggggagacagggacagagggag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406215 288 + 7796314 CACTTGGCACAGAAAGTCATCAACA----ggccccagtgcccatttctggccttatcttctgttaatgccctgcac----ccactcctatgctgtagccaactggaaagagccattatcc---------cctcag-------------------gaacacTGGCTTCTCAGTAAATGATTATAGCCCAGAAACCCTGTCGGCACAGAACCCAGCTGTTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaagg-ttaggcaaa-gggga-----ggggagacagggacagagggac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 881851 291 - 74750902 CGCTTGGCGC----AGTCCCCAACA---Gggccccagtgcacatttctggtcttatctcctgctaatcccctgccccacccccttcctatgctgcagctgaatggaatga-ccattttcc---------ccaaaG-------------------GAACGCTGGTTTCTCAGTAAATGTTTATAGCACAGAAGCCCGGTCAGCGCAGGACGCAGCCATTGGCTAATGGGTCAGCTTTAGCTCCATTTCTCTGAAtaatttattttggaacataatctc--agagcaagg-ttaggaaaa-ggagagcaaggttagaacagggacagagggag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420429 291 + 17725628 CGCTTGGCGCAAAGAGTCATGAGCA---GGGCCCCGGGGCACACTTCTGGTCTTGTCTCCTGCTAA-CCCCTGCCCCACCCCCTTCCTATGCTGCATCTGAATGGAACGA-CCATTATCC---------GAGAGG-------------------GAACACTGGTTCCTCAGTAAACGTTTCCAGCACAGAAGCCCTGTTAGCGCGGGACCCAGCTGTTGGCTAATGGGTCAGCTTTAGCTCCATTTCTCTGAAtaatttattttggaacatagtctcaaagagcaagg-ttaggaaaa-ggaga-----ggtgagacagggacagagggag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379105 288 - 6778120 cgcgtggcgcaaagagtcatcaaca---gggccccagtgcacacttctggtcttatgtcctgctaa-tccctgccc--ccaccttcctgtactgcagcTGAATGGAACGA-CCACTA-CC---------CCGAGG-------------------GAACGCTGGTTTCTCAGTAAATGTTTGTAGCACAGAAGCCCTGTCAGCGCTGTACCCAGCTATTGGCTGACTGGTCAGCTTTAGCTCCATTTCTCTGAAtaatttattttggaacataatctcaaagagcaagg-ttaggaaaa-gggga-----ggtgagacagggacagagggag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35451 292 - 69927 cgcttggcgcaaagagtcatcaaca---gggccccagtgcacatttctggtctcatctcctgctagtcccctgccccacacccttcctatgctgcagcTGAATGGAATGA-CCGTTATCC---------CCAAGG-------------------GAACACTGGTTTCTCAGTAAATGTTTATAGCACAGAAGCCCTGTCAGTGCAGGACCCAGCTATTGGCTAATGGGTCAGCTTTAGCTCCATTTCTCTGAAtaatttatttcggaacatagtctcaaagagcaagg-ttaggaaaa-ggaga-----ggtgagacaggtacagagggag i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 385294 291 - 608964 CGCCTGGCACACAAAATTCTCCACAACAGGGCCCCAGGGCACATTCCTGGCCTTATCTCCTGCAAGTCCCCTGCGC----CCACTCCTATGTTGTGG--GGGTAGAATGACCCCTTGTCC---------CCTAGG-------------------GAACACTGGTTTCTAAGCAAATGATTATAGCACAGGAACCCTGTGGGCACGGAGCCCAGCTGTTGGCTAATGGGTGTGCTTTAACCTAGTTTCTCTGACtaatttatttaggcacataatccccaggagcagggattagggaac-gggga-----agtggaacggggataaagggag i otoGar3.GL873829 C 0 I 339 s mm10.chr16 65404145 300 - 98207768 GGTCTGGCCT-----GCCACCACCA----AGCTC---TGCAGACCTCCAGCTTTATC-CCTGCTAATCCCCCTCAC----CCACTCTTGGG-TGCAGCTGAACAGGATCCCCCATTCTCCTCACCCAAGCCTTGGTCTGGGCCTTTGCTAATCTGAACCCTTGTTTCTGGGCAACTGATTGCAGCA-AGGATCCCTGTTGGCCCAGAGCCCAGCTCTTGGCTAATGGTTTTGTGTTGGCTTAATTTCTCTaaggaatttatttaggaacataactccaatg-----gg-attagagta-aggca-----aataaaacagggatggagggag i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=2251375.000000 s hg38.chr3_KI270779v1_alt 85349 287 + 205312 agcctatgcaaagacgtgttatccagttggcccctgctgtggctggctggttgctcaatcctgtaagatcttctaagaagctttatgagatgtag-tgagaaccacctgtcctggggatgagtctgtctgtcggcttccattcctcatgggttatgagttgctccacaggATTCTGGATGTATAcagatgctct--------tcatcttaggaaggggttacgtcccaataaacacgtggtaagtc-aaaaatactgtaagtcagaaacacatttaataccctgataagcccatcat s panTro5.chr3 200069441 287 + 202621043 agcctgtgcaaagacatgttatccagtcggcccctgctgtggctggctggttgcacgatcctgtaagatcttctaagaagctttctgagatgtag-tgagaaccacctgtcctggggatgagtctgtctgtcggctcccattcctcatgggttatgagttgctccacaggATTCTGGATGTATAcagatgttct--------tcatcttaggaagggtttacgtcccaataaacacgtggtaagtc-aaaaatactgtaagtcagaaacacatttaataccctgataagcccatcgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49421 287 + 190779 agcctgtgcaaagacatgttatccagtcggcccctgctgtggctggctggttgcacgatcctgtaagatcttctaagaagctttatgagatgtag-tgagaaccacctgtcctggggatgagtctgtctgtcggctcccattcctcatgggttatgagttgctccacaggATTCTGGATGTATAcagatgttct--------tcatcttaggaagggtttacgtcccaataaacacgtggtaagtc-aaaattactgtaagtcagaaacacatttaataccctgataagcccatcgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 10748 265 + 106623 agcctgtgcaaagacgtgttatccagtcggcccctgctgtgg-tggctggttgcgtgatcctgtaagatcttctaa-aagcTTTATGAGATGTAG-TGAGAACCATCTGTCCT-GGGATGAGTCTG------------------TCATGGGTTATGAGTTGCTCCACAGGATTCTGGATGTATAcagatgttcc--------tcatcttaggaaggggttatgtccca--taacacgtggtaagtcaaaaaatactgtaagtcagaaacacatttaataccctgataagcccatcat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202415496 283 + 204787373 agcccgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtaagatcttctaagaagctttatgagatgtat-tgagaaccatctgtcctggggatgaa----tctgtcggctcccagtcctcatgggttacgagttgctccACAGGATTCTGGATATATACGAatgttcc--------tcatctgaggaaggggttacgtcccaataaacacttggtaagtc-aaaaatactgtaagtcagaaacacatttaataccctgataagcccatcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22572 283 + 192460366 agcccgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtaagatcttctaagaagcTTTATGAGATGTAT-TGAGAACCATCTGTCCTGGGGATGAA----TCTGTCAGCTCCCAGTCCTCATGGGTTACGAGTTGCTCCACAGGATTCTGGATATATACGAatgttcc--------tcatctgaggaaggggttacgtcccaataaacacttggtaagtc-aaaaatactgtaagtcagaaacacatttaatacCCTGATAAGCCCATCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497534 283 + 19675229 agcccgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtgagatcttctaagaagctttatgagatgtat-tgagaaccatctgtcctggggatgaa----tctgttggctcccagtcctcatgggttacgagttgctccACAGGATTCTGGATATATACGAatgttcc--------tcatctgaggaaggggttacgtcccaataaacacttggtaagtc-aaaaatactgtaagtcagaaacacatttaataccctgataagcccatcat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434285 287 + 16847902 agcctgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtaagatcttctaagaagctttatgagatgtat-tgagaaccatctgtcctggggatgaatctgtctgtcggctcccagtcctcatgggttacaacttgctccacaggATTCTGGATATATAcagatgttcc--------tcatctgaggaaggagttacgtcccaataaacacttggtaagtc-aaaaatactgtaagtcagaaacacatttaatacCCTGATAAGCccatcat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 371830 283 - 91754291 agcccgtgcaaagccgtgttatccagtcggcccctgctgtggctcactggttgtgcgatcctgtaagatcttctaagaagcTTTATGAGATGTAT-TGAGAACCATCTGTCCTGGGGATGAC----TCTGTCGGCTCCCAGTCCTCACGGGTTACGAGTTGCTCCACAGGATTCTGGATATATAcagatgttcc--------tcatctgaggaaggggttacgtcccaataaacacttggtaagtc-aaaaatactgtaagtcagaaacacatttaatacCCTGATAAGCCCATCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 524929 287 - 1977891 agcccgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctataagatcttctaagaagctttatgagatgtat-tgagaaccatctgtcctggggatgaatctgtctgtcggctcccagtcctcatgggttacgagttgctccacaggATTCTGGATATATAcagatgttcc--------tcatctgaggaaggggttatgtcccaataaacacttggtaagtc-aaaaatactgtaagtcagaaacacatttaataccctgataagcccatcat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406503 287 + 7796314 agcccgtgcaaagacgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtaagatcttctaagaagctttatgagaggtat-tgagaaccatctgtcctggggatgaatctgtctgtcggctcccagtcctcatgggttacgagttgctccacaggATTCTGGATATATAcagatgttcc--------tcatctgaggaaggggttacgtcccaataaacacttggtaagtc-aaaaacactgtaagtcagaaacacatttaataccctaaTAAGCccatcat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 882142 274 - 74750902 agcccgtgcagagatgtgttatccagttggcccctgctctggctggctggttgcttgatcctgtacgatcttctaagaagctttctgagatgtatctgagaaccgtctgtcctgggaatgaa----tctgtcggctcccattcctcatgagttacgagttgctgcacaggATTCTGGATACATACAGATGTTCCTCGgttcctcgtcttaggaaggggttatgtcccgataaacaagtg-----------------gtaagtcagaa--acatgtaagccTctgataagcccatcgt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 420720 286 + 17725628 cgcccgtgcaaagatgcgtc-tccggttgg-ccctgctgtggctggctggttgcttgatcctgtaccatcttctaagaagcttcatgagacgtgtctgagaactatctgtcctgggagtgaa----tctgtcggctcccactcctcatgagttacaagctgctccacaggATTCTGG-TACATACAGATGTTCCTCGgttcttcgtcttaggaagggattctgtcccgat-aacaagtgataagtc-aaaaatactgtaagtcagaa--acatttaatacTctgacaagcccatcat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379393 287 - 6778120 cgcccgtgcaaagacgtgtc-tccagttggcccctgctgtggctggctggtggcttgatcctgtacgatcttctaagaagctttatgagacgtgtctgagaaccatctgtcct-ggaatgaa----tctgtcggctcccattcctcatgagttacgagttgct-cacaggATTCTGGATACCTACAGATGTTCCTCGgttcttcgtcttaggaaggggttccgtcccgataaacaagtggtaagtc-aaaaatactgtaagtcagaa--gcagttaacacTCTGATAAGCCCATCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 35743 289 - 69927 agcctgtgcagagatgtgttacccagttggcccctgctgtggctggctggttgcttgatcctgtacgatcttctaagaagctttctgagatgtatctgagaaccgtccgtcctgggaatgag----tctgtcggctcctattcctcacgggttatgagttgctccACAGGATTCTGGATACATAGAGATGCTCCTCGgttcttcgtcttaggaaggg-ttacgttccgaaaaacaagtggtgggtc-aaagatactgtaagtcagaa--acatttgatacTCTGATAAGCccatcat i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65404445 208 - 98207768 ggccagcacaaagacctaccctccagtcggctctagctgtggctggctagttgcttcg-cctgtgggatcttctaagagaccttggggaatgtgtctgaaaGGCATCTAT-CTGGTAACAGATCAGTGTGCCTGTCTCCTTTCC-CATGGACTACAAGTTGGCCTACAGAGTCTTGGAAATATATA---------------------------------------------------------------------------TTAAAAACATATGTAATAGAGTGAT----------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 385585 339 - 608964 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=144190.000000 s hg38.chr3_KI270779v1_alt 85636 19 + 205312 aaagtc-aaacaattttaaa s panTro5.chr3 200069728 19 + 202621043 aaagtc-aaacaattttaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49708 19 + 190779 aaagtc-aaacaattttaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11013 18 + 106623 aaagtc-aaac-attttaaa i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202415779 19 + 204787373 aaagtc-aaaaaattttaag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22855 19 + 192460366 AAAGTC-AAAAAATTTTAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497817 19 + 19675229 gaagtc-aaaaaattttaag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434572 19 + 16847902 aaagtc-aaaaaattttaag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372113 19 - 91754291 AAAGTC-AAAAAATTTTAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525216 19 - 1977891 aaagtc-aaaaaattttaag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406790 19 + 7796314 aaagtc-aaaaaatttgaag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 882416 20 - 74750902 aaagtcaaaaaaattttaag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 421006 19 + 17725628 aaagtc-aaaaaattttaag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379680 6 - 6778120 AAAGTC-------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36032 19 - 69927 aaagtc-aaaaaactttaag i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 385924 19 - 608964 AAAGTC-AAAAAATCAGAAG i otoGar3.GL873829 I 339 C 0 s mm10.chr16 65404653 13 - 98207768 -------TAACAACTTTAAG i mm10.chr16 C 0 I 43 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=205815.000000 s hg38.chr3_KI270779v1_alt 85655 26 + 205312 tccaatcattgtaagccaggaccatc s panTro5.chr3 200069747 26 + 202621043 tccaatcattgtaagccgggaccatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49727 26 + 190779 tccaatcattgtaagccgggaccatc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11031 26 + 106623 tccaatcattgtaagccgggaccatc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202415798 26 + 204787373 tcaaatcattgtaaaccgggaccgtc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22874 26 + 192460366 TCAAATCATTGTAAACCGGGACCGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497836 26 + 19675229 tcaaatcattgtaaaccgggaccgtc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434591 24 + 16847902 tcaaatcattgtaaaccgaagacA-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372132 26 - 91754291 TCAAATCATTGTAAACCGGGACCGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525235 26 - 1977891 tcaaatcattgtaaaccgggaccgtc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406809 26 + 7796314 tcaaatcattgtaaactgggaccatc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 882436 26 - 74750902 tcaaatcattgtaagttgggaccatc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 421025 26 + 17725628 tcaaatcactgtaaattgggaccatc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379686 24 - 6778120 --AAATCACTGTAAGTTGGGACcatc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36051 26 - 69927 tcaaataattgtacgttgggaccatc i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 385943 20 - 608964 TCAAATCA------GTTGGGACcatc i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404666 43 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=675201.000000 s hg38.chr3_KI270779v1_alt 85681 65 + 205312 tgTATACCCaagacatacacaaggatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac s panTro5.chr3 200069773 65 + 202621043 tgTATACCCaagacatatacaaggatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49753 65 + 190779 tgTATACCCaagacatatacaaggatgttcatagcagctttatccaaaatagtgaaaaa--c--aaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11057 64 + 106623 tgTATACCCaagacatatacaaggat-ttcatagcagtttattccaaaatagtgaaaaa--c--taaac i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202415824 65 + 204787373 tgTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22900 65 + 192460366 TGTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497862 65 + 19675229 tgTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434615 65 + 16847902 TATATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372158 65 - 91754291 TGTATACCCaagacatatataagaatgtccatagcagctttattcaaaatagtgaaaga--c--aaaac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525261 65 - 1977891 tgTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406835 64 + 7796314 tgTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaa- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 882462 65 - 74750902 tgTACACccaagatacatgcaagaacgttcatagcagctttattcaaaatagtgaaaac--c--aaaat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 421051 64 + 17725628 tgTATACCCaagacataagcaagaatgttcatagcagctttattc-aaatagtgaaaaa--c--aaaat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379710 65 - 6778120 tgtatacccaagacataaacaagaatgttcatagcagctttatttaaaatagtgaaaaa--c--aaaat i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36077 65 - 69927 tgTATACCCaagaagtataccagaatgttcatagcagctttattcaaaatagtgaaaaa--c--aaaat i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 385963 67 - 608964 tgtatacccaagacacatacaagaatgttcacagcagctttattcaaaatagtgaacaagta--gaaac i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29041242 67 + 31377067 tgtatacccaaagcgtatgcgagactattcctagcagctttctttcgaatagtgaaaaa--ctggaaat i canFam3.chr33 I 2307 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404666 43 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1094064.000000 s hg38.chr3_KI270779v1_alt 85746 134 + 205312 aatccaaatgcacagcaatagg-aaaacagacaaataaattgtggtata-tttatacagtggaatactatgcaacaacaaaaaaggatgaagca-taatact-acac---acagc-gtgagtgagtctcacagacacagtgt s panTro5.chr3 200069838 134 + 202621043 aatccaaatgcacagcaattgg-aaaacagacaaataaattgtggtata-tttatacagtggaatactatgcgacaacaaaaaaggatgaagca-taatact-acac---acagc-gtgagtgagtctcacagacacagtgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49818 134 + 190779 aatccaaatgcacagcaattgg-aaaacagacaaataaattgtggtata-tttatacagtggaatactatgcgacaacaaaaaaggatgaagca-taatact-acac---acagc-gtgagtgagtctcacagacacagtgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11121 134 + 106623 aatccaaatgcccagcaattggaaaaacggacaaataaattgtggtata-tttatacagt-gaatactatgcaacaacaaaaaaggatgaagca-taatact-acac---acagc-atgagtgagtctcacagacacagtgt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202415889 133 + 204787373 aatccaaatgcccagcaattgg-aaaatgggtaaataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacact-acac---acagc-gtgagtgagtctcacagacacagtgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 22965 133 + 192460366 aatccaaatgcccagcaattgg-aaaatgggtaaataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacact-acac---acagc-gtgagtgagtctcacagacacagtgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 497927 133 + 19675229 aatccaaatgcccagcaattgg-aaaatgggtaaataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacact-acac---acagc-gtgagtgagtctcacagacacagtgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434680 133 + 16847902 aatccaaatgcccagcaaatgg-aaaatgggtaaataaattgtggtata-tttatacaatgaaatactgtgcaacaac-aaaaaggatgaagta-taacact-acac---acagc-gtgagtgagtctcacagacacagtgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372223 129 - 91754291 aatccaaatgcccagcaattgc-aaaatgg----ataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacacc-acac---acagt-gtgagtgagtctcacagacacagtgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525326 133 - 1977891 aatccaaatgcccagcaattgg-aaaatgggtaaataaattgtggtata-tttatacaatgaaatactgtgcaacaac-aaaaaggatgaagta-taacact-acac---acagc-gtgagtgagtctcacagacacagtgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 406899 123 + 7796314 ----caaatgcccagcaattgg-aaaatggataaataaattgtggtata-tttatacaatggaatgctatgcaacagc-aaaaaggatgaagta-taatact---ac---acagt-gtgagtgagtctc----acacagtgt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 882527 131 - 74750902 aatccaaatgcccagcaatagg-aaaatggacaaataaattgtgttaca-tttatgcaatggaatactacccaaagacaaaaacagatgaagta-AAATACTTAAac---atcatgatgtttcaat-----agatacaatgt i calJac3.chr17 C 0 I 1086 s saiBol1.JH378146 421115 135 + 17725628 aatccaaatgcccagcaatagg-aaaatggagaaataaatcgtgttata-tttatgcaacggaacactacccaacaacaaaaacggatgaagta-aaatagttcaac---agcac-atggctgagtctggcagacatagtgt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379775 131 - 6778120 aatctaaatgcccagcaagagg-aaaatggacaaataaattgtgttata-tttatgcagtggaatactacccaacaacaaaaacggatgaagta-aaacacttccac---agcac-atggctgagt----ctcacatagtgt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36142 135 - 69927 aatccaaatgcccagcaatagg-aacatggacaaataaattgtgttacg-tttatgcaatggaatatgacccaacgacaaaaacagatgaagta-aaatacttaaac---agcac-gtggctgagtctcacagacgcagtgt i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 386030 113 - 608964 agcctgaaagcccatcaatagt-aaaatggacaaataacttgtggtatc-tttatat---------ttaaacaatgac---------------a-tactgtc-gcatgtgacaac-atgggtctgtctcacagacataatgt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65404709 135 - 98207768 aacccaaacatccatcaataag-aaaatggccacagaagttgtggttga-taattccaaaggaaaaccacccgccatc---taaggataaagcattattatt-atacgtaagagc-tctggtgaacctcacagacagaatgt i mm10.chr16 I 43 C 0 s canFam3.chr33 29041309 130 + 31377067 gatacaagtgtccatcaatagg-aacatggagaaataaattg---tatactttctacaatggaatagtatctaacagcaaacaagaatggagta-c--tgct-acac---acaac-acaggggagtttcacaggcataatgt i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e dasNov3.JH569502 3860860 1617 + 6579706 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=237070.000000 s hg38.chr3_KI270779v1_alt 85880 27 + 205312 taacagagagaatccagacacaaaaga s panTro5.chr3 200069972 27 + 202621043 taacagagagaatccagacacaaaaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49952 27 + 190779 taacagagagaatccagacacaaaaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11255 27 + 106623 aaacagagagaatccagacacaaaaga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202416022 27 + 204787373 taacagagagaatccagacacaaaaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 23098 27 + 192460366 taacagagagaatccagacacaaaaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 498060 27 + 19675229 taacagagagaatccagacacaaaaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434813 27 + 16847902 taacagagagaatccagacacaaaaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372352 27 - 91754291 taacagagagaatccagacacaaaaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525459 27 - 1977891 taacagagagaatccagacacaaaaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 407022 27 + 7796314 taacagagagaatccagacacaaaaga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 421250 25 + 17725628 caac--aaagaatccagacacaaaaga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379906 25 - 6778120 caac--aaagaatgcagacacaaaaga i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36277 24 - 69927 caac--aaagaatcctg-cacaaaaga i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 386143 27 - 608964 gaagagaaagaagccaggtacaaaaga i otoGar3.GL873829 C 0 I 156 s mm10.chr16 65404844 27 - 98207768 tacatgtaagaagccaaatactgaaaa i mm10.chr16 C 0 C 0 s canFam3.chr33 29041439 27 + 31377067 taagaaaaagaagccagacacgaaaga i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e dasNov3.JH569502 3860860 1617 + 6579706 I e calJac3.chr17 882658 1086 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=481718.000000 s hg38.chr3_KI270779v1_alt 85907 68 + 205312 gcctatctatgcatgattccattt-atatgaagttcaaagacatgcagagctaatctatggtg--atagag s panTro5.chr3 200069999 68 + 202621043 gcctatctatgcatgattccattt-atatgaagttcaaagacatgcagagctaatctatggtg--atagag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 49979 68 + 190779 gcctatctatgcatgattccattt-atatgaagttcaaagacatgcagagctaatctatggtg--atagag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11282 69 + 106623 gcctatctatgcatgattccatttaatatgaagttcaaagacatgcagagctaatctatggtg--atagag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202416049 65 + 204787373 gcctatatatgcatgattccattt-acatgaagctcaaagacaggcagagctaatctatggtg--a---ag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 23125 65 + 192460366 gcctatatatgcatgattccattt-acatgaagctcaaagacaggcagagctaatctatggtg--a---ag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 498087 65 + 19675229 gcctatatatgcatgattccattt-acatgaagctcaaagacaggcagagctaatctatggtg--a---ag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434840 66 + 16847902 gcctatatatgcatgattccattt-acatgaagttcaaagacacgcagagctaatctatggtg--at--ag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372379 65 - 91754291 gcctatatctgcatgattccattt-acatgaagctcaaagacaggcagagctaatctatggtg--a---ag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525486 66 - 1977891 gcctatatatgcatgattccattt-acatgaagttcaaagacaggcagagctaatctatggtg--at--ag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 407049 65 + 7796314 gcctatatctgcatgattccattt-acatgaagttcaaagacaggcagagctaatctatggtg--a---ag i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 421275 68 + 17725628 gcatataagtgcacgattccgttt-acatgaaattcagagacaggcagaactcatctgtggtg--atagag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379931 68 - 6778120 gcatatatacacatgattccattt-atatgaaattcaaagacaggcagagctcatctgcggcg--acagag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36301 66 - 69927 gcatatatatgcatgactccattt-atctgaaattcagaga----cagaactcatctgtggcgatatagag i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65404871 52 - 98207768 ----gcgcacgcacaatcctattc-acat--agtc----------ctgaatgtgtccatggtg--gcagaG i mm10.chr16 C 0 I 218 s canFam3.chr33 29041466 66 + 31377067 --gtatggaatcctaattccattt-atatgaagttcagaaataggcagaactaacccatggtg--atagag i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 386170 156 - 608964 I e dasNov3.JH569502 3860860 1617 + 6579706 I e calJac3.chr17 882658 1086 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=136781.000000 s hg38.chr3_KI270779v1_alt 85975 17 + 205312 ataagaatggtggttac s panTro5.chr3 200070067 17 + 202621043 ataagaatggtggttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50047 17 + 190779 ataagaatggtggttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11351 17 + 106623 ataagaatggtggttac i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202416114 17 + 204787373 ataagaatggtggttac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 23190 17 + 192460366 ataagaatggtggttac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 498152 17 + 19675229 ataagaatggtggttac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 434906 17 + 16847902 gtaagaatggtggttac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372444 17 - 91754291 ataagaatggtggttac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 525552 17 - 1977891 gtaagaatggtggttac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 407114 17 + 7796314 gtaagaacggtggttac i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 421343 17 + 17725628 gtaagaacagtggttac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 379999 17 - 6778120 gtaagaatggtggttac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36367 17 - 69927 gtaagaatggtggttac i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29041532 11 + 31377067 gcaagaatgat------ i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 386170 156 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e calJac3.chr17 882658 1086 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=408938.000000 s hg38.chr3_KI270779v1_alt 85992 55 + 205312 Actgaaatgggaggatcgct-caaacccgggaggcggaggctgcagtgaaccatga s panTro5.chr3 200070084 55 + 202621043 Actgaaatgggaggatcgct-caaacccgggaggcggaggctgcagtgaagcatga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50064 55 + 190779 Actgaaatgggaggatcgct-caaacccgggaggcggaggctgcagtgaaccatga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11368 53 + 106623 ACTGAAAT-ggaggatcgctccaaacccgggaggc-gaggctgca-tgaaccatga i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202416131 55 + 204787373 AGtgaaatgggaggatcgct-cgaacccgggaggcggaggctgcagtgaaccatga i rheMac8.chr2 C 0 I 1122 s macFas5.chr2 23207 55 + 192460366 AGtgaaatgggaggatcgct-cgaacccgggaggcggaggctgcagtgaaccatga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 498169 55 + 19675229 AGtgaaatgggaggatcgct-cgaacccgggaggcggaggctgcagtgaaccatga i macNem1.NW_012014355v1 C 0 I 1045 s cerAty1.NW_012004056v1 434923 55 + 16847902 Actgaaatgggaggatcgtt-cgaacccgggaggcggaggctgcagtgaaccatga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 372461 55 - 91754291 Actgaaatgggaggatcgct-cgaacccgggaggcggaggctgcagtgaaccgtga i chlSab2.chr15 C 0 I 1966 s manLeu1.NW_012102020v1 525569 55 - 1977891 Actgaaatgggaggatcgct-cgaacccgggaggtggaggctgcagtgagccatga i manLeu1.NW_012102020v1 C 0 I 926 s colAng1.NW_012118932v1 407131 55 + 7796314 Actgaaatgggaggattgct-cgaacccgggaggcggaggctgcagtgaaccatga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 421360 55 + 17725628 Actgaaacgggagggttgct-cgaactcgggaggcagaggcctcagtgaaccgtga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380016 50 - 6778120 cctgaagtggggggtttgct-cgaacccgggaggcagaggccgcagtgaac----- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36384 54 - 69927 Accgaaatgggagggttgct-cgaaccc-ggaggcagaggctgcagcgaaccgtga i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 386326 55 - 608964 gctgaggcaggaggatctct-tgagcccaggtgtttgaggttgctgtgagctataa i otoGar3.GL873829 I 156 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041543 0 + 31377067 C e calJac3.chr17 882658 1086 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=9084.000000 s hg38.chr3_KI270779v1_alt 86047 3 + 205312 tgg s panTro5.chr3 200070139 3 + 202621043 tgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50119 3 + 190779 tgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11421 3 + 106623 tgg i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 23262 3 + 192460366 cgg i macFas5.chr2 C 0 I 3 s cerAty1.NW_012004056v1 434978 3 + 16847902 tgg i cerAty1.NW_012004056v1 C 0 I 923 s colAng1.NW_012118932v1 407186 3 + 7796314 tgg i colAng1.NW_012118932v1 C 0 I 992 s saiBol1.JH378146 421415 3 + 17725628 tgg i saiBol1.JH378146 C 0 I 7 s aotNan1.NW_018503669v1 36438 3 - 69927 ggg i aotNan1.NW_018503669v1 C 0 I 7 s otoGar3.GL873829 386381 3 - 608964 tga i otoGar3.GL873829 C 0 I 3 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041543 0 + 31377067 C e cebCap1.NW_016107444v1 380066 0 - 6778120 C e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 882658 1086 - 74750902 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=29256.000000 s hg38.chr3_KI270779v1_alt 86050 16 + 205312 agctgcactccagctt- s panTro5.chr3 200070142 16 + 202621043 agctgcactccagctt- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50122 16 + 190779 agctgcactccagctt- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11424 15 + 106623 agctgcactccagc-t- i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 23268 16 + 192460366 cactgcactccagctt- i macFas5.chr2 I 3 I 1142 s saiBol1.JH378146 421425 16 + 17725628 cactgcactccagctt- i saiBol1.JH378146 I 7 C 0 s cebCap1.NW_016107444v1 380066 11 - 6778120 -----cactccagctt- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36448 16 - 69927 cactgcactccagctt- i aotNan1.NW_018503669v1 I 7 C 0 s otoGar3.GL873829 386387 16 - 608964 cactgcactctacctg- i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 29041543 3 + 31377067 --------------ttt i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 882658 1086 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=307290.000000 s hg38.chr3_KI270779v1_alt 86066 208 + 205312 tggagacagag------cgagaccctgtctctaaaaaaaaaaaaaaa----------------------------aTGATT-------------GTT---------------CCATTCTGTggtggcaagt-----------------------------gggggcttgactggaagggaacacaagggcacctgttgaggtgctgagcacgttctgtatcttgacctgagtgtcggata-catcctggggataca-----tacgtacataaaaattcatcagggtatacgctacttaagctggg s panTro5.chr3 200070158 206 + 202621043 tggagacagag------caagaccctgtctctaaaaaaaaaaaaaaa------------------------------gaTT-------------GTT---------------CCATTCTGTggtggcaagt-----------------------------gggggcttgactggaagggaacacaagggcacctgctgaggtgctgagcacattctgtatcttgacctgagtgtcggata-catcctggggataca-----tacgtacataaaaattcatcagggtatgagctacttaagctggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50138 204 + 190779 tggagacagag------caagaccctgtctctaaaaaaaaaaaaa--------------------------------gaTT-------------GTT---------------CCATTCTGTggtggcaagt-----------------------------gggggcttgactggaagggaacacaagggcacctgctgaggtgctgagcacattctgtatcttgacctgagtgtcggata-catcctggggataca-----tacgtacataaaaattcatcagggtatgagctacttaagctggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11439 207 + 106623 tggagacagag------cgagaccctgtctctgaaaaacaaaaaaaT------------------------------GATT-------------GTT---------------CCATTCTGTggcggcaagc-----------------------------gggggcttgactggaagggaacacaagggcacctgttgaggtgctgagcacattctgtatcttgacctgagtgtcagataccatcctggggataca-----taagtacgtaaaaattcatcagggtatacgctacttaagctggg i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 421441 207 + 17725628 cggacacagag------ccagaccctttctctaaaaaccaaaaaT--------------------------------GATT-------------GTT---------------CCGTTCTGTAGCAGCAAGT------------------------------GGGGCCtgactggaagggaacgcgagggaacc-gttgaggcgctgagcacattctaaatcctgacctgagtgtcggata-catcctgggcatctacacattacagatgaaaacattcatgaggctatacgctacttcagaggga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380077 206 - 6778120 cagagacagag------ccagaccctttctctaaaaaCCAAGAAT--------------------------------GATT-------------GTT---------------CCGTTCTGTGGCAGCAAGT------------------------------GGGGCCtgactggaagggaacacaagggaact-gttgaggcgctgagcacattctgaatcttgacctgagtgtcaggta-catcctgggcatatacacattacatacgaaaa-attcatcaggctacatgctacttcagatgga i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36464 211 - 69927 cggagccagagccagaaccagaccctttctctaaaaaCCAGGaat--------------------------------gatt-------------gtt---------------atgttctgtggcagcaggt------------------------------ggggcctgactgggagggagcaca--gggatc-ttcgaggcgctgagcacattctgagtcctgacttgagtgtcggata-cacgctgggcgtatacacattacatacgtaaacactcatcaggctacacgctacttaagacaga i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 386403 291 - 608964 ggacaacaagg------agaatctctgtctcaaaaaaaaaaaaaaaaagaaaggaaaaaaaaggagtatatatgcatgattctaattatatgaagttcaaaaataagcagaactaatctatggtgacgagataagaatggtggttacatctggttagtaggtgggtccgactggagggtaacacaagggagcctattgaggctctggcaatgttctgtatcttcacgcgggtggcagata-tgtcctgagtata-------tacgtatgtaaaaattcatcaagctgtacactacttaagattgc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29041546 137 + 31377067 ------------------------------------------------------------------------------------------------------------------------tgggggagaga-----------------------------------atgactgg-agggaataggagggagcctattgagatacggaaagtgtcttctatct----ctgagtggtggcta-gctcctgggtata-------ttcacgtgtaaaaattcattaagttgtaggctacttaggattga i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 882658 1086 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=324803.000000 s hg38.chr3_KI270779v1_alt 86274 127 + 205312 cgtagtttacagtatgt--aggttacaacataaaaaaGAAGTGAATGAACCAAAGAATACTGGGCTCCCTGGCGTTTCCTCTTCTGCAACCCAAGGAAATAAGCCTCGGTGTGGAGAGGGCCTGTCCTC s panTro5.chr3 200070364 127 + 202621043 cgtagtttacagtatgt--aggttacaccataaaaaaGAAGCGAATGAACCAAAGAATACTGGGCTCCCTGGCGTTTCCTCTTCTGCAACCCAAGGAAATAAGCCTCGGTGTGGAGAGGGCCTGTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50342 127 + 190779 cgtagtttacagtatgt--aggttacaccataaaaaaGAAGCGAATGAACCAAAGAATACTGGGCTCCCTGGCGTTTCCTCTTCTGCAACCCAAGGAAATAAGCCTCGGTGTGGAGAGGGCCTGTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11646 129 + 106623 cataatttacagtatggtaaggttacaccataaaaaaGAAGTGAATGAACCAAAGAATACTGGGCTCCCTGGCGTTTCCTCTTCTGCAACCCAAGGAAATAAGCCTCGGTGTGGAGAGGGCCTGTCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 883744 127 - 74750902 catagtttatactatgt--aggttacacataatgaaagaaGTGAGTGAGCCAAAGAATACTGGGCTCCCTGGTGCTTCCTCTTCTGCAACCGGAGGAAATAAGCCTCGGTGTGGAGAGCACCTGCTCTC i calJac3.chr17 I 1086 C 0 s saiBol1.JH378146 421648 103 + 17725628 catggtttatagcatgt--gggttacacACAACACAAGAAGTGAGTGAA------------------------GCTTCCTCTTCTGCAACCCATGGAAATGAGCCTCGGTGTGGAGAGCACCTGTCATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380283 123 - 6778120 cacagttcatggtatgt--aggtcacacgcaataaaaG----GAGTGAACCAAAGAATACTGGGCTCCCTGGTGCTTCCTCTTCTGCAACCCAAGGAAATAAGCCTTGGAGTGGAGAGCACCTGTTCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36675 127 - 69927 catacttcacagtgtgt--aggttacacataataaaagaagtgagtgaaccaaagaatactgggctcCCTGGCGCTTCCTCTTCTGCAACCCAAGGAAATAAGCCTTGGTGTGAAGAGCACCTGTTCTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 386694 126 - 608964 tatcgtttattgcacat--aggttacactgta-ataaaaaGTGACTGGACAAGAGAATAGAGGGTTCCCTGGAATTTCCTATTCTGCAACCCAAGGAAATAAGTGTTGGTGTGGGCAAGgcctattttc i otoGar3.GL873829 C 0 I 5846 s canFam3.chr33 29041683 127 + 31377067 tgtagtttgcagtgtgt--gggttatgccctagtaaagagaTGAATGAACGAATGGACAGAGGGCTCCCTGGAGTTTCCTACACTATAGCCCAAGGACTACGGGTTAGGATTGGGGAAGGCCCATTCTC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=11388.000000 s hg38.chr3_KI270779v1_alt 86401 4 + 205312 AGGG s panTro5.chr3 200070491 4 + 202621043 AGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50469 4 + 190779 AGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11775 4 + 106623 AGGG i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 883871 4 - 74750902 GGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 421751 4 + 17725628 AGGG i saiBol1.JH378146 C 0 I 474 s cebCap1.NW_016107444v1 380406 4 - 6778120 AGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 36802 4 - 69927 AGGG i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29041810 4 + 31377067 AGGT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=10476.000000 s hg38.chr3_KI270779v1_alt 86405 3 + 205312 CCT s panTro5.chr3 200070495 3 + 202621043 CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50473 3 + 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11779 3 + 106623 CCT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 883875 3 - 74750902 CCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 422229 3 + 17725628 cct i saiBol1.JH378146 I 474 C 0 s cebCap1.NW_016107444v1 380410 3 - 6778120 CCT i cebCap1.NW_016107444v1 C 0 I 503 s aotNan1.NW_018503669v1 36806 3 - 69927 CCT i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29041814 3 + 31377067 CCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=10870.000000 s hg38.chr3_KI270779v1_alt 86408 8 + 205312 GGCAGATG s panTro5.chr3 200070498 8 + 202621043 GGCAAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50476 8 + 190779 GGCAAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11782 8 + 106623 GGCAAATG i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 883878 8 - 74750902 TGCAAATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 422232 8 + 17725628 ggcTGACT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 36809 8 - 69927 TGCAAATT i aotNan1.NW_018503669v1 C 0 I 347 s canFam3.chr33 29041817 8 + 31377067 TGCAAATT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e cebCap1.NW_016107444v1 380413 503 - 6778120 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=27915.000000 s hg38.chr3_KI270779v1_alt 86416 12 + 205312 TAGGCGATTCTT s panTro5.chr3 200070506 12 + 202621043 TAGGCGATTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50484 12 + 190779 TAGGCGATTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11790 12 + 106623 TAGGCGATTCTT i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 883886 12 - 74750902 TAGGTGAttctt i calJac3.chr17 C 0 I 4660 s saiBol1.JH378146 422240 12 + 17725628 TAGGTGATTCTT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 37164 12 - 69927 TAGGTGATTCTT i aotNan1.NW_018503669v1 I 347 C 0 s canFam3.chr33 29041825 12 + 31377067 TAGATGATTCTC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e micMur3.chr1 25871148 1634 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e cebCap1.NW_016107444v1 380413 503 - 6778120 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=22489.000000 s hg38.chr3_KI270779v1_alt 86428 15 + 205312 ACCACGTCTCCTTCG s panTro5.chr3 200070518 15 + 202621043 ACCACGTCTCCTTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50496 15 + 190779 ACCACGTCTCCTTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11802 15 + 106623 ACCACGTCTCCTTCG i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422252 15 + 17725628 ACCAAGTCAGCGTCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 37176 15 - 69927 ACCACGTCTGTGTCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25872782 15 - 114275543 ACCACCTCTCCTTCA i micMur3.chr1 I 1634 C 0 s canFam3.chr33 29041837 15 + 31377067 ACCACCTCTTCTGTG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e cebCap1.NW_016107444v1 380413 503 - 6778120 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=39650.000000 s hg38.chr3_KI270779v1_alt 86443 19 + 205312 GTAAGCCCACCTGGCAAGT s panTro5.chr3 200070533 19 + 202621043 GTAAGCCCGCCTGGCAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50511 19 + 190779 GTAAGCCCACCTGGCAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11817 19 + 106623 GTAAGCCTGCCTGGCAAGT i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422267 19 + 17725628 GTAATCCCGCCTGGCCAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380916 19 - 6778120 GTAATCCCGCCTGGCCAGT i cebCap1.NW_016107444v1 I 503 C 0 s aotNan1.NW_018503669v1 37191 19 - 69927 GTAATCCGGCCTGGCCAGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25872797 19 - 114275543 GTAACCCTGCCTGGCGGGG i micMur3.chr1 C 0 C 0 s canFam3.chr33 29041852 19 + 31377067 GTGACCCTGCATGTAAACC i canFam3.chr33 C 0 I 1 e proCoq1.NW_012133858v1 7392382 1499 + 22200726 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=26856.000000 s hg38.chr3_KI270779v1_alt 86462 7 + 205312 TCTCATC s panTro5.chr3 200070552 7 + 202621043 TCTCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50530 7 + 190779 TCTCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11836 7 + 106623 TCTCATC i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422286 7 + 17725628 TCTCATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380935 7 - 6778120 TCTCATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37210 7 - 69927 TCTCATC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25872816 7 - 114275543 TCTCATC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7393881 7 + 22200726 TCTCAGC i proCoq1.NW_012133858v1 I 1499 C 0 s canFam3.chr33 29041872 7 + 31377067 TCTCATT i canFam3.chr33 I 1 C 0 e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65404923 218 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=175781.000000 s hg38.chr3_KI270779v1_alt 86469 47 + 205312 CACATAATCTGTGCATGCTCAACATTTGAAACCAGTGGGGACCCATT s panTro5.chr3 200070559 47 + 202621043 CACATAATCTGTGCATGCTTAACATTTGAAACCAGTGGGGACCCATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50537 47 + 190779 CACATAATCTGTGCATGCTTAACATTTGAAACCAGTGGGGACCCATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11843 47 + 106623 CACATAATCTGTGCATGCTCAACATTTGAAACCAGTGGGGACCCATT i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422293 47 + 17725628 CACATAATCTGTGCATGCTCAACATTTGAAACGAGTGGGGGCCCATT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380942 47 - 6778120 CACATAATCTGTGCATGCTCAACATTTGAAACCAGTGGGGGCCCATT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37217 47 - 69927 CACATAATCTGTGCATGCTCAACATTTGAAACCAGTGGGGGCCCATT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25872823 47 - 114275543 CACACGACCTGTACATGCTCAGCATTTGAAACCTGTGGGGACCCATT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7393888 47 + 22200726 CACACGACCTGTGCGTGCTCAGCATTTGAAACCTGTGGGGACCCATt i proCoq1.NW_012133858v1 C 0 I 3784 s mm10.chr16 65405141 47 - 98207768 CACACTGTCTGTGCTCACACAACATGCAGAACTTGTGGAATCCTCTC i mm10.chr16 I 218 C 0 s canFam3.chr33 29041879 47 + 31377067 TAAACCATCTGCGCATACTCAACATTTTGAACTTGTAGGGCCATGTT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 386820 5846 - 608964 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=66413.000000 s hg38.chr3_KI270779v1_alt 86516 33 + 205312 C-GGACCCCAAGAGTTGGTATTAGAGATCATTTT s panTro5.chr3 200070606 33 + 202621043 C-GGACCCCAAGAGTTGGTATTAGAGATCATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50584 33 + 190779 T-GGACCCCAAGAGTTGGTATTAGAGATCATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11890 34 + 106623 CAGGACCCCAAGAGTTGGTATTAAAGATCATTTT i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422340 32 + 17725628 C-AGA-CCCAAGAGTTGGTATTAAAGATCATTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 380989 32 - 6778120 C-AGA-CCCAAGAGTTGGTATTAAAGATCATTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37264 32 - 69927 C-GGA-CCCAAGAGTTGGTATTAAAGATCATTTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25872870 32 - 114275543 -AAGACCCCCAGAGTTGGTA-TAAAAATTATTTT i micMur3.chr1 C 0 C 0 s mm10.chr16 65405188 33 - 98207768 -AGAACCCTGTCAGCTGGCATGAAGAGTTTCTTT i mm10.chr16 C 0 I 4922 s canFam3.chr33 29041926 30 + 31377067 -CGGA-CCTCAGAGTTGGTA-TAAAGATATTTT- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e otoGar3.GL873829 386820 5846 - 608964 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=31384.000000 s hg38.chr3_KI270779v1_alt 86549 10 + 205312 AAAGTGAAAA s panTro5.chr3 200070639 10 + 202621043 AAAGTGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50617 10 + 190779 AAAGTGAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11924 10 + 106623 AAAGTGAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422372 10 + 17725628 AAAGTGAAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 381021 10 - 6778120 AAAGTGAAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37296 10 - 69927 AAAGTGAAAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25872902 10 - 114275543 AAAGTGAAAA i micMur3.chr1 C 0 I 4970 s canFam3.chr33 29041956 10 + 31377067 AAAGTAGAAA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=2800.000000 s hg38.chr3_KI270779v1_alt 86559 1 + 205312 C s panTro5.chr3 200070649 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50627 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11934 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422382 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 381031 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 37306 1 - 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29041966 1 + 31377067 C i canFam3.chr33 C 0 I 5697 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=192904.000000 s hg38.chr3_KI270779v1_alt 86560 109 + 205312 Tggccaggcacgatggcttacacctgtaatcccagcactttgggaggctgaggtgggcggatcacatgaggtcaggagttcgagaccaacttggccaacatggtgaaac s panTro5.chr3 200070650 109 + 202621043 Tggctaggcacgatggcttacacctgtaatcccagcactttgggaggctgaggtgggcggatcacatgaggtcaggagttcgagaccaacttggccaacatggtgaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50628 109 + 190779 Tggctaggcacgatgacttacacctgtaatcccagcactttgggaggctgaggtgggcggatcacatgaggtcaggagttcaagaccaacttggccaacatggtgaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 11935 109 + 106623 Tggccgggcacgatggcttacacctgtaatcccagcactttgggaggctgaggtgggcggatcacatgaggtcaggagttcgagaccaacctggccaacatggtaaaac i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422383 109 + 17725628 CAgccaggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacttgaggccaggagttcgagaccagcctggccaacatggtgaaac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 381032 109 - 6778120 Tggccaggcgcagtggcttacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggccaggagttcgagaccagcctggccaacatggtgaaac i cebCap1.NW_016107444v1 C 0 I 2676 s aotNan1.NW_018503669v1 37307 109 - 69927 Tggccaggtacggtggcttatgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggccaggagttcgagaccaggctggccgacatggtgaaac i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=375.000000 s hg38.chr3_KI270779v1_alt 86669 1 + 205312 c s panTro5.chr3 200070759 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50737 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 12044 1 + 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s saiBol1.JH378146 422492 1 + 17725628 c i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 37416 1 - 69927 c i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e macFas5.chr2 23284 1142 + 192460366 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=2100.000000 s hg38.chr3_KI270779v1_alt 86670 1 + 205312 c s panTro5.chr3 200070760 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50738 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 12045 1 + 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 24426 1 + 192460366 c i macFas5.chr2 I 1142 C 0 s saiBol1.JH378146 422493 1 + 17725628 c i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 37417 1 - 69927 c i aotNan1.NW_018503669v1 C 0 I 9987 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=3205.000000 s hg38.chr3_KI270779v1_alt 86671 3 + 205312 tgt s panTro5.chr3 200070761 3 + 202621043 tgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50739 3 + 190779 tgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 12046 3 + 106623 tgt i gorGor5.CYUI01000576v1 C 0 I 3041 s macFas5.chr2 24427 3 + 192460366 tgg i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 422494 3 + 17725628 tgt i saiBol1.JH378146 C 0 I 1834 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 498224 1045 + 19675229 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e manLeu1.NW_012102020v1 525624 926 - 1977891 I e chlSab2.chr15 372516 1966 - 91754291 I e cerAty1.NW_012004056v1 434981 923 + 16847902 I e rheMac8.chr2 202416186 1122 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=142902.000000 s hg38.chr3_KI270779v1_alt 86674 37 + 205312 tgactcaggatgactcagattagagcaggtgactggg s panTro5.chr3 200070764 37 + 202621043 tgactcaggatgactcagattagagcaggtgactggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50742 37 + 190779 tgactcaggatgactcagattagagcaggtgactggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15090 37 + 106623 tgactcaggatgactcaggtcagagcagttgaccagg i gorGor5.CYUI01000576v1 I 3041 C 0 s rheMac8.chr2 202417308 37 + 204787373 tgactcaggatgactcaggtcagagcaggtgaccagg i rheMac8.chr2 I 1122 C 0 s macFas5.chr2 24430 37 + 192460366 tgactcaggatgactcaggtcagagcaggtgaccagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 499269 37 + 19675229 tgactcaggatgactcaggtcagagcaggtgaccagg i macNem1.NW_012014355v1 I 1045 C 0 s cerAty1.NW_012004056v1 435904 37 + 16847902 tgactcaggatgactcaggtcagagcaggtgaccagg i cerAty1.NW_012004056v1 I 923 C 0 s chlSab2.chr15 374482 36 - 91754291 tgactcaggatgactcaggtcagagcaggtgacc-gg i chlSab2.chr15 I 1966 C 0 s manLeu1.NW_012102020v1 526550 37 - 1977891 tgactcaggatgactcaggtcagagcaggtgaccagg i manLeu1.NW_012102020v1 I 926 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e calJac3.chr17 883898 4660 - 74750902 I e saiBol1.JH378146 422497 1834 + 17725628 I e colAng1.NW_012118932v1 407189 992 + 7796314 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1369097.000000 s hg38.chr3_KI270779v1_alt 86711 300 + 205312 ggtgactcaggatggagcaggtgatagaggctaggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgattctttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAAGAATTTATTATATCCTACAaacctgggaggcagaggttgcagtgagccaagattgggccatcgcactccagcctgggcaataagaatgaaactctgtctcaaaaaaaac s panTro5.chr3 200070801 298 + 202621043 ggtgactcaggatggagcaggtgatagaggctaggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgactctttggagaggatctcagaac-cattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacctgggaggcagaggttgcagtgagccaagattgggccatcgcactccagcctgggcaataagaatgaaactctgtctcaaaaaaa-c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 50779 367 + 190779 ggtgactcaggatggagcaggtgatagaggctaggagggggttgtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgaatctttggagaggaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgactctttggagaggatctcagaac-cattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacctgggaggcagaggttgcagtgagccaagattgggccatcgcactgcagcctgggcaataagaatgaaactctgtctcaaaaaaa-c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15127 298 + 106623 gatgactcaggatggagcaggtgatagaggctgggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagagaacaaggaagttaaactttaaaatgaagagctgaacatactgatacattgattctttggagaggatctcagaactcattgtacttaacaTTTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATAT-CTACAaacccgggaggcagaggttgaagtgagccaagatcgggccattgcactccagcctgggcgacaagaatgaaactctgtctcaaaaaaa-c i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202417345 295 + 204787373 ggtgactcaggatggagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacac----tgtttggagaggatctcagaactcgttgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtggaggttgcagtgagccaagattgtgccattgcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 24467 295 + 192460366 ggtgactcaggatggagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacac----tgtttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtggaggttgcagtgagccaagattgtgccattgcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 499306 287 + 19675229 ggtgactcaggatggagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacgt--------ac----tgtttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtggaggttgcagtgagccaagattgtgccattgcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 435941 295 + 16847902 ggtgactcaggatggagcaggagatagaggctaggaaggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacac----tgtttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtggaggttgcagtgagccaagatcgtgccattgcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 374518 299 - 91754291 ggtgactcaggatggagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacactgattgtttggagaagatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTAAAaacccaggaggtggaggttgcagtgagccaagatcgtgccattgcactccagtctgggcaacaagaatgaaactgcatctcaaagaaa-c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 526587 295 - 1977891 ggtgactcaggatggagcaggagatagaggctaggaaggggttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacac----tgtttggagaggatctcagaactcattgtacttaacaATTTATAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtggaggttgcagtgagccaagatcgtgccattgcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-c i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 408181 299 + 7796314 ggtgactcaggatggagcgggagatagaggctaggaggggcttgtttactgaaactaggggcaaggagat---------------------------------------------------------------------gaagaaaacgaggaagttaaattttaaaatgaagagctgaacgtactgacacactgattgtttggagaggatctcagaactcatcgtacttatcaATTTACAGGCTAAAGCCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtggaggttgcaatgagccaagatcatgccattgcactccagtctgggcaacaagaatgaaactccatctcagaaaaa-c i colAng1.NW_012118932v1 I 992 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e calJac3.chr17 883898 4660 - 74750902 I e saiBol1.JH378146 422497 1834 + 17725628 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=399879.000000 s hg38.chr3_KI270779v1_alt 87011 75 + 205312 aaaaGTTGGCCAGggctgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaagcaggtggatc s panTro5.chr3 200071099 75 + 202621043 aaaaGTTGGCTAGggctgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaagcaggtggatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51146 75 + 190779 aaaaGTTGGCTAGggctgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaagcaggtggatc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15425 74 + 106623 aaaaGTTGGCTAGggccgggcgtggtggctcacacctgtaatcccagcactttggga-gctgaggcaggcagatc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202417640 75 + 204787373 aaaaGTTGGCTAGAgccgggcgtggtggctcacacctataatcttagcactttgggaggctggggcaggtggatc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 24762 75 + 192460366 aaaaGTTGGCTAGAgccgggcgtggtggctcacacctataatcttagcactttgggaggctggggcaggtggatc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 499593 75 + 19675229 aaaaGTTGGCTAGAgccgggcgtggtggctcacacctataatctcagcactttgggaggctggggcaggtggatc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 436236 75 + 16847902 aaaaGTTGGCTAGAgccgggcatggaggctcacacctataatcccagcacttcgggaggctggggcaggtggatc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 374817 75 - 91754291 aaaaGTTGGCTAGAgccaggcatggaggctgacacccataatctcagcactttgggaggctggggcaggtggatc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 526882 75 - 1977891 aaaaGTTGGCTAGAgccgggcgtggtggctcacacctataatctcagcactttgggaggctgaggcaggtggatc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 408480 75 + 7796314 aaaaGTTGGCTAGAgccaggcgtggtggctcacacctataatcccagcactttgggaggccgaggcaggtggatc i colAng1.NW_012118932v1 C 0 I 1661 s saiBol1.JH378146 424331 75 + 17725628 agaagttgtctgggtccgggccaggtggctcacacctataatcccagcactttgggaggccaaggtgggccgatc i saiBol1.JH378146 I 1834 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e calJac3.chr17 883898 4660 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1178844.000000 s hg38.chr3_KI270779v1_alt 87086 313 + 205312 acctgaggtcagaagtacgagaccatcgtggctaatatggtgaaaccccatctctactcaaaatac------gaaaaaagaaaaaaaaaattagccaagcacggtggtgcacgcctgttatcccagctgcttaggaagctgaggcaggagaattgcctg-atcccagaggcagaggttgcagtgaactgggattgtgccact-gcactccagcctaggcgacagagcaagattctgtctc----aa---aaataaatacataaat----a------------aagttttagagcaggaatgaaaggaagtaaagtacacttgga--agagctgtgttggcaactgg s panTro5.chr3 200071174 312 + 202621043 acctgaggtcagaagtacgagaccatcctggctaatatggtgaaaccccatctctactaaaaatat------gaaaaaagaaaaaaaaa-ttagccaagcacggtggtgcacgcctgttatcccagctgcttaggaagctgaggcaggagaatcgcctg-atcccagaggcagaggttgcagtgaactgggattgcgccact-gcactccagcctaggcgacagagcaagattctgtctc----aa---aaataaatacataaat----a------------aagttttagaacaggaatgaaaggaagtaaagtacacttgga--agagccgtgttggcaactgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51221 312 + 190779 acctgaggtcagaagtacgagaccatcctggctaatatggtgaaaccccatctctactaaaaatat------gaaaaaagaaaaaaaaa-ttagccaagcacggtggtgcacgcctgttatcccagctgcttaggaagctgaggcaggagaatcgcctg-atcccagaggcagaggttgcagtgaactgggattgcgccact-gcactccagcctaggcgacagagcaagattctgtctc----aa---aaataaatacataaat----a------------aagttttagaacaggaatgaaaggaagtaaagtacacttgga--agagccgtgttggcaactgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15499 313 + 106623 acctgaggttaggagtacgggacca-cctggctaatatggtgaaaccccatctctactaaaaatac--------aaaaataaaaaaaaattaagccaagcatggtggtgcgtgcctgttatcccagctgctcaggaagctgaggcaggagaatcgcttg-aatccagaggcagaggtcgcagtgaactgggattgcaccactggcactccagcctaggcgacagagcaagactctgtctc----aaaataaataaataaatgaat----a------------aagttttagagcaggaatgaaaggaagtaaagta-acttgga--agagccgtgttggcaactag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202417715 314 + 204787373 ------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatac------acacacacaaaaatata-ttagccaagcatggtggtgcgtgcctgttatcccaga-gctcaggaagctgaggcaggagaattgcttgaatcccagaggcagagactgcagtgaactgggattgtgccact-gcactccagcctgggtgacggagcaagactctgtctcataaat---aaataaataaataaat----aaataaat-aaT-aagttttagagcaggaatgaaaggaagtaaaatacacttgga--agagccacgtgggcaactgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 24837 315 + 192460366 ------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatac------acacacaaaaaaatata-ttagccaagcatggtggtgcgtgcctgttatcccaga-gctcaggaagctgaggcaggagaattgcttgaatcccagaggcagagactgcagtgaactgggattgtgccact-gcactccagcctgggtgacggagcaagactctgtctcataaat---aaataaataaataaat----aaataaat-aataaagttttagagcaggaatgaaaggaagtaaagtacacttgga--agagccacgtgggcaactgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 499668 311 + 19675229 ------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatac------acacaaaaaaaaatata-ttagccaagcatggtggtgcatgcctgttatcccaga-gctcaggaagctgaggcaggagaattgcttgaatcccagaggcagagactgcagtgaactgggattgtgccact-gcactccagcctgggtgacagagcaagactctgtctc----at---aaataaataaataaat----aaataaat-aataaagttttagagcaggaatgaaaggaagtaaagtacacttgga--agagccacgtgggcaactgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 436311 307 + 16847902 ------------aagtatgggacgatcctggctaatatggtgaaaccccatctctactaaaaatac---aaaaaaaaaaaaaaaaaaaa-ttagccaagcatggtggtgcgtgcctgttatcccaga-gctcaggaagctgaggcaggagaatctcttgaatcccagaggcagagactgcagtgaactgggattgtgccact-gtactccagcctgggtgacagagcaagactctgtctc----at---aaataaataaataaat----aaata--------aagttttagagcaggaatgaaaagaagtaaagtacacttgga--agagccacgtgggcaactgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 374892 324 - 91754291 ------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatac-aaaaaata-aaaaataaaaaaa-ttaaccaagcatggtggtgcgtgcctgttatcccaga-gctcaggaagctgaggcaggagaatcgcttgaatcctagaggcagagactgcagtgaactgggattgtgctgct-gcactccagcctgggtgacagagcaagactctgtctcataaat---aaataaataaataaataaataaataaataaataaagttttagagcaggaatgaaaggaagtaaagtacacttgga--agagccacgtgggcaactgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 526957 321 - 1977891 ------------gagtatgggaccatcctggctaatacggtgaaaccccgtctctactaaaaatacaaaaaaatatatatatatatata-ttagccaagcatggtggtgcatgcctgttattccaga-gctcaggaagctgaggcaggagaattgcttgaatcccagaggcagagactgcagtgaactgggattgtgccact-gcactccagcctgggtgacagagcaagactctgtctcataaat---aaataaataaataaat-----aataaataaataaagttttagagcaggaatgaaaggaagtaaagtacacttgga--agagccacgtgggcaactgg i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 424406 299 + 17725628 acctgaggtcagaagttcaggaccagcttggccaacatggtgaaaccccatc----------------------------aaaaaaaaa-ttagccaggcatggtggca-gcacctgtaatctcagctgcttgggaggctaaggcaggagaatcgcttgactcccagagacagaggctgcagtgaactgggattgcagcact-gcactccagccttggcgatacagcaagactctgtctc----aa---aaataaataaacaaat----aaatacatacacaacattttagagcaggcatgaaaggaag-----cacatttggaagagagtcacgtgggcaagctg i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e calJac3.chr17 883898 4660 - 74750902 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=461475.000000 s hg38.chr3_KI270779v1_alt 87399 88 + 205312 agagatccgagtgcctcatctgacccttga-cttgggattaatacattggcatgAGATGTGAGCAGTGACTCAAAGTTGCTCAGAAAAA s panTro5.chr3 200071486 88 + 202621043 agagatccgagtgcctcatctgacccttga-cttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCAGAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51533 88 + 190779 agagatccgagtgcctcatctgacccttga-cttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCAGAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15812 86 + 106623 agagatccaggtgccccatctgacccttga-cttggga-taatacattggcatgAGATGTGAGCAGTGACTCAAAGTTGCTCAG-AAAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202418029 88 + 204787373 agagatccaggtgccccatctgacccttga-cttgggattaatatattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i rheMac8.chr2 C 0 I 21 s macFas5.chr2 25152 88 + 192460366 agagatccaggtgccccatctgacccttga-cttgggattaatatattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i macFas5.chr2 C 0 I 6 s macNem1.NW_012014355v1 499979 88 + 19675229 agagatccaggtgcCCCATCTGACCCTTGA-CTTGGGATTAATATATTGACATGAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i macNem1.NW_012014355v1 C 0 I 21 s cerAty1.NW_012004056v1 436618 88 + 16847902 agagatccaggtgccccatttgacccttgg-cttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i cerAty1.NW_012004056v1 C 0 I 21 s chlSab2.chr15 375216 88 - 91754291 agagatccaggtgccccatctgacccttga-cttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i chlSab2.chr15 C 0 I 21 s manLeu1.NW_012102020v1 527278 88 - 1977891 agagatccaggtgccccatctgacccttga-cttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i manLeu1.NW_012102020v1 C 0 I 21 s calJac3.chr17 888558 88 - 74750902 agagacccaagcgccccatctgacccttga-ttggggttttatgtatcagcatgAGATCTGAGCAATGACTCAAAGTTGCTCAGAGGAA i calJac3.chr17 I 4660 C 0 s saiBol1.JH378146 424705 89 + 17725628 agcgatccaagcaccccgtctgacccttgacttggggttttatgtattggcatgAGATTTGAGCGATGACTCGAAGCTGCTCAGAGGAA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1308.000000 s hg38.chr3_KI270779v1_alt 87487 2 + 205312 AA s panTro5.chr3 200071574 2 + 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51621 2 + 190779 AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15898 2 + 106623 AA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25246 2 + 192460366 CT i macFas5.chr2 I 6 C 0 s calJac3.chr17 888646 2 - 74750902 AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 424794 2 + 17725628 AA i saiBol1.JH378146 C 0 I 2 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=9071.000000 s hg38.chr3_KI270779v1_alt 87489 13 + 205312 TCTTCCCCCGCTA s panTro5.chr3 200071576 13 + 202621043 TCTTCCCCCACTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51623 13 + 190779 TCTTCCCCCACTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15900 13 + 106623 TCTTCCCCGGCTA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25248 13 + 192460366 CCTGCCCCCGCTA i macFas5.chr2 C 0 C 0 s calJac3.chr17 888648 13 - 74750902 ATCTCACGTGCTC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=16175.000000 s hg38.chr3_KI270779v1_alt 87502 30 + 205312 TTTAGTACTGCAGCTGGCACCTGCCCTCCC s panTro5.chr3 200071589 30 + 202621043 TTGAGTACTGCAGCTGGCACCTGCCCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51636 30 + 190779 TTGAGTACTGCAGCTGGCACCTGCCCTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 15913 30 + 106623 TTTAGCACTGCAGCTGGCACCTGCCCTCCC i gorGor5.CYUI01000576v1 C 0 I 536 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e macFas5.chr2 25261 0 + 192460366 C e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=151.000000 s hg38.chr3_KI270779v1_alt 87532 5 + 205312 CACGC s panTro5.chr3 200071619 5 + 202621043 CACGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51666 4 + 190779 CACA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e macFas5.chr2 25261 0 + 192460366 C e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 15943 536 + 106623 I a score=-3853.000000 s hg38.chr3_KI270779v1_alt 87537 8 + 205312 ACTGCAG-----------------------------C s panTro5.chr3 200071624 37 + 202621043 ACTGCAGCTGGCACCTGCCCTCCCCACGCACTGCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51670 2 + 190779 ---GC-------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 I 46 s gorGor5.CYUI01000576v1 16479 8 + 106623 ACTGCAAC----------------------------- i gorGor5.CYUI01000576v1 I 536 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e macFas5.chr2 25261 0 + 192460366 C e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=15340.000000 s hg38.chr3_KI270779v1_alt 87545 32 + 205312 TGGCACCTGCCCTCCCCACACCAGTATTTGGT s panTro5.chr3 200071661 32 + 202621043 TGGCACCTGCCCTCCCCACACCAGTATTTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51718 32 + 190779 TGGCACCTGCCCTCCCCACACCAGTATTTAGT i panPan2.chrUn_NW_014024201v1 I 46 T 78 s gorGor5.CYUI01000576v1 16487 31 + 106623 TTGTACCTGCCCT-CCCACACCAGTATTTAGT i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e macFas5.chr2 25261 0 + 192460366 C e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=32502.000000 s hg38.chr3_KI270779v1_alt 87577 73 + 205312 ACTGCAGCT-GGCACCTGCCCTCCCCTCTGC--TATTTAGTACT-GCAGCTGGCACCTGCCCTCCACACAGCAGTAT s panTro5.chr3 200071693 73 + 202621043 ACTACAGCT-GGCACCTGCCCTCCCCTCTGC--TATTTAGTACT-GCAGCTGGCACCTGCCCTCCCCACACCAGTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51672 73 + 190779 ACTGCAGCT-GGCACCTGCCCTCCCCTCTGC--TATTTAGTACT-GCAGCTGGCACCTGCCCTCCCCACACCAGTAT i panPan2.chrUn_NW_014024201v1 T 78 C 0 s gorGor5.CYUI01000576v1 16518 76 + 106623 -ATGCAGCTGGGCACCTGCCCTCCCCACGCCAGTATTCAGTACTGGCAGCTGGCACCTGCCCTCCCCATGCCAGTAT i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e macFas5.chr2 25261 0 + 192460366 C e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=26066.000000 s hg38.chr3_KI270779v1_alt 87650 35 + 205312 TTAGTACTGCAGCTGGCACCTGCCCTCCCCACACC s panTro5.chr3 200071766 35 + 202621043 TTAGTACTGCAGCTGGCACCTGCCCTCCCCCCTGC i panTro5.chr3 C 0 T 78 s panPan2.chrUn_NW_014024201v1 51745 30 + 190779 TTAGTACTGCAGCTGGCACCTGCCCTCCCC----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 16594 35 + 106623 TTAGTActgcagctggcacctgccctcccccctgc i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25261 35 + 192460366 TTAGTTCTGCAGCTGGCACCTGCCCTCCCCACGTC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=191.000000 s hg38.chr3_KI270779v1_alt 87685 2 + 205312 AG s macFas5.chr2 25296 2 + 192460366 AG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e panPan2.chrUn_NW_014024201v1 51775 0 + 190779 C e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I e gorGor5.CYUI01000576v1 16629 0 + 106623 C e panTro5.chr3 200071801 78 + 202621043 T a score=2778.000000 s hg38.chr3_KI270779v1_alt 87687 7 + 205312 TATTTAG s panTro5.chr3 200071723 7 + 202621043 TATTTAG i panTro5.chr3 T 78 C 0 s gorGor5.CYUI01000576v1 16629 7 + 106623 tatttag i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25298 7 + 192460366 TGCTCAG i macFas5.chr2 C 0 T 40 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e panPan2.chrUn_NW_014024201v1 51775 0 + 190779 C e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=10371.000000 s hg38.chr3_KI270779v1_alt 87694 33 + 205312 TACTGCAGCTGGCACCTGCCCTCCCCACACCAG s panTro5.chr3 200071730 33 + 202621043 TACTGCAGCTGGCACCTGCCCTCCCCACACCAG i panTro5.chr3 C 0 I 38 s panPan2.chrUn_NW_014024201v1 51775 4 + 190779 ---------------CTGC-------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 16636 31 + 106623 cactgcagctggcacctgccctcccccctgc-- i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25265 33 + 192460366 TTCTGCAGCTGGCACCTGCCCTCCCCACGTCAG i macFas5.chr2 T 40 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1332.000000 s hg38.chr3_KI270779v1_alt 87727 2 + 205312 TA s panTro5.chr3 200071801 2 + 202621043 TA i panTro5.chr3 I 38 C 0 s panPan2.chrUn_NW_014024201v1 51779 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 16667 2 + 106623 TA i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25298 2 + 192460366 TG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e calJac3.chr17 888661 0 - 74750902 C e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=755.000000 s hg38.chr3_KI270779v1_alt 87729 1 + 205312 T s panTro5.chr3 200071803 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51781 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 16669 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 25300 1 + 192460366 C i macFas5.chr2 C 0 T 40 s calJac3.chr17 888661 1 - 74750902 T i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 381141 2676 - 6778120 I e macNem1.NW_012014355v1 500067 21 + 19675229 I e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e manLeu1.NW_012102020v1 527366 21 - 1977891 I e chlSab2.chr15 375304 21 - 91754291 I e cerAty1.NW_012004056v1 436706 21 + 16847902 I e rheMac8.chr2 202418117 21 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=111015.000000 s hg38.chr3_KI270779v1_alt 87730 27 + 205312 TTAGTACTGCAGCTGGCACC-TGCCCTC-- s panTro5.chr3 200071804 28 + 202621043 TTAGTACTGCAACTGGCACCCTGCCCTC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51782 28 + 190779 TTAGTACTGCAACTGGCACCCTGCCCTC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 16670 28 + 106623 TTAGTACTGCAACTGGCACCCCTGCACT-- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202418138 27 + 204787373 TTAGTTCTGCAGCTGGCACC-TGCCCTC-- i rheMac8.chr2 I 21 C 0 s macFas5.chr2 25261 27 + 192460366 TTAGTTCTGCAGCTGGCACC-TGCCCTC-- i macFas5.chr2 T 40 C 0 s macNem1.NW_012014355v1 500088 27 + 19675229 TTAGTTCTGCAGCTGGCACC-TGCCCTC-- i macNem1.NW_012014355v1 I 21 C 0 s cerAty1.NW_012004056v1 436727 27 + 16847902 TTAGTTCTGCAGTTGGCACC-TGCCCTC-- i cerAty1.NW_012004056v1 I 21 C 0 s chlSab2.chr15 375325 27 - 91754291 TTAGTTCTGCAGCTGGCACC-TGCCCTC-- i chlSab2.chr15 I 21 C 0 s manLeu1.NW_012102020v1 527387 27 - 1977891 TTAGTTCTGCAGTTGGCACC-TGCCCTC-- i manLeu1.NW_012102020v1 I 21 C 0 s calJac3.chr17 888662 26 - 74750902 TTAGTACTGCAGCTGGCACC----CCCCAG i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 383817 26 - 6778120 TTAGTACTGCAACTGGCACC----CCCCAA i cebCap1.NW_016107444v1 I 2676 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e saiBol1.JH378146 424796 2 + 17725628 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=2483842.000000 s hg38.chr3_KI270779v1_alt 87757 427 + 205312 CCCACGTCAGTGTTCAGGATTCTTTCTCT---CTGTTTTTC--TTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTGTTATGTTTATTGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagccgggaatggcttagggccgacctgccccccattctattcaaaatcacccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgcgacc-tttgtctctcacccacctgtgacctggaagctttctcctggctgcgagttgtcccacatttgcttggcgttgcccggccttttccagactgaaccaatgttcatcttacatgtgttgattgatgtctcatgtctccctaaaacgtat s panTro5.chr3 200071832 427 + 202621043 CCCACGTCAGTGTTCAGGATTCTTTCTCT---CTGTTTTTC--TTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATGTTTATTGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgccccccattctattcaaaatcacccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgctacc-tttgtctctcacccacctgtgacctggaagctttctcctggctgcgagttgtcccacgtttgcttggcgttgcccggccttttccagactgaaccaatgttcatcttacatatgttgattgatgtctcatgtctccctaaaacgtat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 51810 427 + 190779 CCCACGTCAGTGTTCAGGATTCTTTCTCT---CTGTTTTTC--TTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATGTTTATTGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgccccccattctattcaaaatcacccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgctacc-tttgtctctcacccacctgtgacctggaagctttctcctggctgcgagttgtcccacgtttgcttggcgttgcccggccttttccagactgaaccaatgttcatcttacatatgttgattgatgtctcatgtctccctaaaacgtat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 16698 425 + 106623 CCCATGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTTTCTTTTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATGTTCATGGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaagctaaagggtaaagtcaagctgggaatggcttagggccaacctg-cccccattctattcaaaatca-ccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgctacc-tttgtctctca-ccacctgtgacctggaagcttt-tcctggctgcgagttgtcccacgtttgcttggcgttgccctgccttttccagactgaaccaatgttcatcttacatatgttgattgatgtctcatgtctccctaaaatgtat i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202418165 427 + 204787373 CCCACGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTTTC---TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATACTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtttctcagtgccgtctttggagagactcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaagctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttacatatgctgattgatgtctcttgtctccctacaatgtgt i rheMac8.chr2 C 0 I 18 s macFas5.chr2 25288 427 + 192460366 CCCACGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTTTC---TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtttctcagtgccgtctttggagagactcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaagctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttacatatgctgattgatgtctcttgtctccctacaatgtgt i macFas5.chr2 C 0 I 18 s macNem1.NW_012014355v1 500115 427 + 19675229 CCCACGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTTTC---TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtttctcagtgccgtctttggagagactcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaagctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttacgtatgctgattgatgtctcttgtctccctacaatgtgt i macNem1.NW_012014355v1 C 0 I 18 s cerAty1.NW_012004056v1 436754 427 + 16847902 CCCACGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTTTC---TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggccgccaaaatcgctaagctaaaggggaaagccaagctgggaacggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtatctgattgccgtctttggagaggctcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaggctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttccatatgctgattgatgtctcttgtctccctacaatgtgt i cerAty1.NW_012004056v1 C 0 I 18 s chlSab2.chr15 375352 428 - 91754291 CCCACGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTGTC--TTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaatggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtatctgattgccgtctttggagaggctcatcagaaactctaaagaacataactgtttgtctctcacccacctgtgacctggaagctttctcctggctttgtgttgtgccacctttgcttggcattgccctgccttttccagatcgaaccaatgttcatcttacgtatgctgattgatgtctcttgtctccctacaatgtgt i chlSab2.chr15 C 0 I 32 s manLeu1.NW_012102020v1 527414 426 - 1977891 CCCACGTCAGTGCTCAGGATTCTTTCTCC---CTGTTTTTC---TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATGTATTGTTTtgtgaaaggagaataaatcttgggctcccataatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctg-ccctgattctattgaaaatcacccc-ctgctcactgagatagatgcgtttctcagtgccgtctttggagaggctcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaggctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttccatatgctgattgatgtctcttgtctccctacaatgtgt i manLeu1.NW_012102020v1 C 0 I 18 s calJac3.chr17 888688 427 - 74750902 CCCATGTCAGTGTTCATGATTCTTTCTCC----TTTTTTTA---TTTTTTTCCATAGTTTTCACCTTTCAATAATTCACTTACATATTACATTTATTGTTTtgtgaaaggaaaataaatcttggggccccaaagtcactaagctgaagggaaaagtcaagctgggaaccgcttcgggcagacctgcctcccgttctgtccaaagtcacccctctgctcaccgagataaacgcatatttaactgcctcctttggagaggctgatcagacactcggaagaatgcagccctgtgtctcttctctacctgcgacctggaagcctgctactggcttccagttgtcccacctttgcttggagttgtccctccttttccaggctgaaccaatgttcctcttacatatattgattgatgtctcgtgtctccctaaaatgtat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 424798 405 + 17725628 CTCACGTCAGTGTTCATGATTCTTTCTCCCGTTTTCTTTTT---TTTTTTTCCATAGTTTTCACCTTTCAATAATTCACTGATTTATGACATTTATTGTTTtgtgaaaggaaaataaatcttggggccccaaagtcactaagctgaagggaaaagtccagctgggaactgcttcgggcagacccacctcctgttctgtccagagtctcccctctgctcactgaggt-aacacatgttgagttgcctcctttggagaggctgatcagaaactcagaagcactcagccctgtgtctcttctctgcctgtggcctggaagcctgctactggcctccagctgtccca---------------------ccttttccaggctgaacctatgttcctcttacatat----attgatgtctcgtgttttcctacaacgtat i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 383843 420 - 6778120 CCCACGTCAGCGTTCACGATTCTTTCTCC------TTTTTT---CTTTTTTCCATAGTTTACACCTTTCAATTATTCACTTATTTATTACATTTATTGTTTtgtgaaaggaaaataaatcttggggccccaaagtcattacgctgaagggaaaagtcaagctgggaactgcttcgggcagacctgcctcccattctgtccaaagtcacccctctgctcgctgagataaacacatatttaattgcctcctttggagaggctaatcagaaactcagaagaatgcagccatgtgtctcttctctacctgtgacctggaagcctgctgctggcttccagctgtcccacctttgcttggagttgttccaccttttccaggctgaaccaatgttcctcttacatatattgattgat-----gtgtctccctaaaatgtat i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=55383.000000 s hg38.chr3_KI270779v1_alt 88184 24 + 205312 ------------------gaccaccttg-gcacatgtcgtcag s panTro5.chr3 200072259 21 + 202621043 ------------------gaccaccttg-gcacatgtc---ag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 52237 21 + 190779 ------------------gaccaccttg-gcacatgtc---ag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 17123 24 + 106623 ------------------gaccaccttg-gcacatgtcgtcag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202418610 24 + 204787373 ------------------gaccaccttg-gcacacgtcgtcag i rheMac8.chr2 I 18 C 0 s macFas5.chr2 25733 24 + 192460366 ------------------gaccaccttg-gcacacgtcgtcag i macFas5.chr2 I 18 C 0 s macNem1.NW_012014355v1 500560 24 + 19675229 ------------------gaccaccttg-gcacacgtcgtcag i macNem1.NW_012014355v1 I 18 C 0 s cerAty1.NW_012004056v1 437199 14 + 16847902 ------------------gaccaccttg----------gtca- i cerAty1.NW_012004056v1 I 18 C 0 s manLeu1.NW_012102020v1 527858 14 - 1977891 ------------------gaccaccttg----------gtca- i manLeu1.NW_012102020v1 I 18 C 0 s calJac3.chr17 889115 43 - 74750902 gaacccaggctgtgccccgcctaccttgggcccaggtcatcag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 425203 43 + 17725628 gaacccaggctgtgccccgcctaccttgggcgcacgtcgccag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 384263 43 - 6778120 gaacccaggctgtgccccgcctaccttgggcccatgtcatcag i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e chlSab2.chr15 375780 32 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=2253429.000000 s hg38.chr3_KI270779v1_alt 88208 385 + 205312 gacatcctgaggctgtgtcacgggtgtgcatcttcaaccttggaacaataaactttctaaattaactgagacctgtctcagatttggggggttcacaTTTtggtaaccatggagggattctgagttgaggtacccctgacctttgacagatctattggtg-cttggtagcaccatgagc-taaccttatggctcaaaccaacaggacaatttgctgaggtctgggagcaccccctccatagag-tccctgatctctcaaaacttggtcgtgatctaaagttta-tttgatgtacaactccccctctccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggctgacaactctttt s panTro5.chr3 200072280 385 + 202621043 gacatcctgaggctgtgtcacgggtgtgcatcttcaaccttggaacaataaactttctaaattaactgagacctgtctcagatttggggggttcacaTTTtggtaaccatggagggattctgagttgaggtgcccctgacctttgacagatctattggtg-cttggtagcagcatgagc-taaccttatggctcaaaccaacaggacaatttgctgaggtctgggagcaccccctccagagag-tccctgatctctcaaaacttggtcgtgatctaaagttta-tttgatgtacaactccccctccccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggctgacaactctttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 52258 385 + 190779 gacatcctgaggctgtgtcacgggtgtgcatcttcaaccttggaacaataaactttctaaattaactgagacctgtctcagatttggggggttcacaTTTtggtaaccatggagggattctgagttgaggtgcccctgacctttgacagatctattggtg-cttggtagcagcatgagc-taaccttatggctcaaaccaacaggacaatttgctgaggtctgggagcaccccctccagagag-tccctgatctctcaaaacttggtcgtgatctaaagttta-tttgatgtacaactccccctccccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggctgacaactctttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 17147 383 + 106623 gacatcctgaggctgtgtcacgggtgtgcatcttcaaccttggaaaaacaaactttctaaattaactgagacctgtctcagattt-gggggttcacaTTTtggtaaccatggagggattctgagttgaggtgcccctgacctttgacagatctattggtgccttggtagcagcatgagcttaaccttat-gctcaaaccaacaggacaattttctgaggtctgggagcaccccctccagagag-tccctgatctctc-aaacttggtcgtgatctaaagttta-tttgatgtacaact-cccctccccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggttggcaactctttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202418634 383 + 204787373 gacttcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggagttcacaTTTT-gcagccatggagggattctgagtggagatgcccccgacctttgacagatctattggag-catgatagcaacatgagc-taaccttacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgttgtacaattccccctccccttcttttggagttttatttgcttccaataaggaaggcaagatttcctgggtgcatgatggtggaaggcaggcaactcttct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 25757 383 + 192460366 gacttcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggagttcacaTTTT-gcagccatggagggattctgagtggagatgcccccgacctttgacagatctattggag-catgatagcaacatgagc-taaccctacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgttgtacaattccccctccccttcttttggagttttatttgcttccaataaggaaggcaagatttcctgggtgcatgatggtggaaggcaggcaactcttct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 500584 383 + 19675229 gacttcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggagttcacaTTTT-gcagccatggagggattctgagtggagatgcccctgacctttgacagatctattggag-catgatagcaacatgagc-taaccttacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgttgtacaattccccctccccttcttttggagttttatttgcttccaataaggaaggcaagatttcctgggtgcatgatgatggaaggcaggcaactcttct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 437213 383 + 16847902 gacctcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgacacctttctcagatttggggcattcacaTTTC-gcagccatggagggattctgagtggagatgcccctgacctttgacagatctattggtg-cttggtagcaacatgagc-taaccttacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgctgtacaattccccctccccttcttttggagttttatttgctcccaataaggaaggcaagatttcctgggtgcatgatgatggaaggcaggcaactcttct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 375812 383 - 91754291 gacctcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggggttcacaTTtg-gcagccatggaggggttctgagtggagatgcccctgacctttgacagatctactggtg-cttggtagcaacatgagc-taaccttacggctcaaaccaataggacaa-tcgctgaggtctggaagcaccccctccagagaaccccccgatctctcaaaacttggtcgtgatctaaagttta-tctgctgtacaattccccct-cccttcttttggagttttatttgcttccaataaggaaggcaagatttcccgggtccatgacgatggaaggcaggcaagtcttct i chlSab2.chr15 I 32 C 0 s manLeu1.NW_012102020v1 527872 383 - 1977891 gacctcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggcgttcacaTTtg-gcagccatggagggattctgagtggagatgcccctgacctttgacagatctattggtg-cttggtagcaacatgagc-taaccttacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgctgtacaattccccctccccttcttttggagttttatttgcttccaataaggaaggcaagatttcctgggtgcatgatgatggaaggcaggcaactcttct i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 889158 379 - 74750902 gacctcctgaggctgcgtgacgggtgtgcgtcctcaaccttggcaaaataaagtttctaaattgactgagacctatctcagatatttggggttcacaTTTtggtaaccataaagggattctgagtggagatgcccctgacctttgacaagtctgttggtg-cttggtacctgcatgagt-taaccttatggttcaaaccaatgggacaatttgctgaggtctgggagcaccccctccaaagaa-tgtctgatctcccaaaatttggtcgtgatctaaagtttattttgctgtacaactcccc------tgtttttggagttttacttgcttccagcaaggaaggcacgatttcctgcgtccatgatgatggaaggcag-caactcctct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 425246 376 + 17725628 gacctcctgaggctgcatcacgggtgtgcgtcctcaaccttggcaaaat-aagtttctaaatggactgagacctgtctcagacatttggggttcacaTTTtggtgaccgtgaagggattctgcctggagatgcccctgcccttgggcaaatctattggtg-cttggtacctgcacgagc-taaccttagggctcaaaccaatgggacaa-tggctgaggtccgggagcaccccttccaaagaa-tccctgatctcccaaaatctggtcgtgatctaaagtttattttgctgtacaactcccc-------gtttttggagtcttacttgcttccagcaaagaaggcaagatttcctgcgcccatgatgatggaaggcag-caactccttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 384306 379 - 6778120 gaccgcccgaggctgcgtcatgagtgtgcgtcctcaaccttggcaaaataaagtttctaaattgactgagacctatctcagacatttggggttcacaTTTtggtaaccatgaagggattctgtgtggagacgcccctgacctttgacaaatctattggtg-cttcgtacctgcatgagt-taaccttatggctcaaaccaacgggacaatttgctgaggtctgggagcacccgctccaaagaa-tccctgatttcccaaaatttggtcgtgatctaaagtttattttgctgtacaactcccc------tgtttttggagttttacttgcttccagcaaagaaggcaagatttcctgcgtccatgatgacgaaaggcag-caactccttt i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e colAng1.NW_012118932v1 408555 1661 + 7796314 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1150954.000000 s hg38.chr3_KI270779v1_alt 88593 163 + 205312 atggagtttgagcttg---ctcccagcagggaagacaagttcgagtttttttcctgcttcaaggatggtagagagcagtcttcagcctgagacccatccctaggtaagtagctgaactgaggttttgtcttggctgaaggttaacaaccagctggtctgaatttct s panTro5.chr3 200072665 163 + 202621043 atggagtttgagcttg---ctcccagcagggaagacaagttcgagtttttttcctgcttcaaggatggtagagagcagtcttcagcctgagacccatccctaggtaagtagctgaactgaggttttgtcttggctgaaggttaacaaccagctggtctgaatttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 52643 163 + 190779 atggagtttgagcttg---ctcccagcagggaagacaagttcgagtttttttcctgcttcaaggatggtagagagcagtcctcagcctgagacccatccctaggtaagtagctgaactgaggttttgtcttggctgaagattaacaaccagctggtctgaatttct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 17530 162 + 106623 atggagtttgagcttg---ctcccagtagggaagac-agttcgagtttttttcctgcttcaaggatggtagagagcagtcttcagcctgagacccatccctaggtaagtagctgaactgaggttttgtcttggCTGAACGTTAACAATCAGCTGGTCTGAATTTCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202419017 163 + 204787373 atggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcttggttaaagcttaacaaccagctggtctgaatttct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 26140 163 + 192460366 atggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcttggttaaagcttaacaaccagctggtctgaatttct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 500967 163 + 19675229 atggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcttggttaaagcttaacaaccagctggtctgaatttct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 437596 163 + 16847902 atggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcgtggttaaagcttaacaaccagctggtctgaatttct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 376195 159 - 91754291 atggagtttga----g---ctcccaacagggaagacaagttcgagtttctttcctgcttccaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcatagaggttttgtcttggttaaagcttaacaaccagctggtctgaatttct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 528255 163 - 1977891 atggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcgtggttaaagcttaacaaccagctggtctgaatttct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 410216 163 + 7796314 atggagtttgagctcg---ctcccaatggggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctagataagtagctgcattaaggttttgtcttggttaaagcttaacgaccagctggtctgaatttct i colAng1.NW_012118932v1 I 1661 C 0 s calJac3.chr17 889537 152 - 74750902 acggggcttcagcttgaacctctcagcagggaagacaagttggagtctttt---------taggatggtagagagcagccttcagcctgagactcatccctaggtaagcagctgaactggggttttgtct----taaagtttaac-aacagttggtcttaatttct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 425622 164 + 17725628 atggagcttcagcttgaacctcccagcaggaaagaaaagttgatgtttttt-cctgcttctaggatggtagagagcagccttcagcctgagactcatcccgaggtaagtagctgaattgtggttttgtcttgtctgaagtttaac-accagttggtcttaatttct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 384685 165 - 6778120 atggagcttcaccttgaacctcccagcagggaaggcaagttggagtttttctcctgcctctaggatggtagagagcagccttcagcctgagactcatccctaggtaagtagctgaactggggttttgtcttggctaaagtttaac-accagttggtcttaatttct i cebCap1.NW_016107444v1 C 0 I 8350 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=415231.000000 s hg38.chr3_KI270779v1_alt 88756 77 + 205312 tcttcccattagagcagtctgtggtcatatcatttgacttttgttgttgttgtt---ttttctggtctttctctcatcag s panTro5.chr3 200072828 80 + 202621043 tcttcccattagagcagtctgtggtcatatcatttgacttttgttgttgttgttgttttttctggtctttctctcatcag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 52806 77 + 190779 tcttcccattagagcagtctgtggtcatatcatttgacttttgttgttgttgtt---gtttctggtctttctctcatcag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 17692 77 + 106623 TCTTCCCGTTCGAGCAGTCTGTGGCCACATCATttggcttttgttgttgttgtt---tgttctggtctttctctcgtcag i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202419180 77 + 204787373 tcttaccattagggcagtcagtggtcatttcattgggctttttttgttgctgtt---tgttctggactttctctcatcag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 26303 77 + 192460366 tcttaccattagggcagtcagtggtcatttcattgggctttttttgttgctgtt---tgttctggactttctctcatcag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 501130 77 + 19675229 tcttaccattagggcagtcagtggtcatttcattgggctttttttgttgctgtt---tgttctggactttctctcatcag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 437759 77 + 16847902 tcttaccgttagggcagtcagtggtcatTTCATTGGGCTTTTCTTGTTGCTGTT---TGTTCTGGACTTTCTCTCATCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 376354 77 - 91754291 tcttaccattagggcagtcagtggtcatttcattgggcttttcttgttgctgtt---cgttctggactttctctcatcag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 528418 77 - 1977891 tcttaccattagagcagtcagtggtcatttcattGGGCTTTTCTTGTTGCTGTT---TGTTCTGGACTTTCTCTCATCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 410379 77 + 7796314 tcttaccattagagcagtcagtggtcatatcgttgggctttttttgttgctgtt---tgttctggactttctctcatcag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 889689 75 - 74750902 cctt-ccatgagagcactcagtgactatatTGTTGG-TTTTTTTTTCTGTTGTT---TGTTCTGGTCTTTCTCTCATCAG i calJac3.chr17 C 0 I 9517 s saiBol1.JH378146 425786 74 + 17725628 ccttaccatgagcacactcggtgatcacatTGTTGG---TTTTTATCTGTTGTT---TGTTCTGGTCTTTCTCCCATCAG i saiBol1.JH378146 C 0 I 5171 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=532102.000000 s hg38.chr3_KI270779v1_alt 88833 112 + 205312 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcctctctaatttggctaaaattccttgcagctgcaaaagagg----aaaaaa s panTro5.chr3 200072908 112 + 202621043 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcctctctaatttggctaaaattccttgcagctgcaaaagagg----aaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 52883 112 + 190779 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcctctctaatttggctaaaattccttgcagctgcaaaaGAGG----AAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 17769 111 + 106623 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcctctctaatttggctaaaattccttgcagctgc-aaaGAGG----AGAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202419257 115 + 204787373 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaagaggaaaaaaaaaa i rheMac8.chr2 C 0 I 1 s macFas5.chr2 26380 115 + 192460366 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaagaggaaaaaaaaaa i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 501207 113 + 19675229 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaagagg--aaaaaaaa i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 437836 111 + 16847902 ATTTGACCAACTCTAcctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaagagg----aaaaaa i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 376431 111 - 91754291 atttgaccaactctgcctgacttggtcaaatccaagtgagaattccaaattatggataacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaaGAGG----Aaaaaa i chlSab2.chr15 C 0 I 7898 s manLeu1.NW_012102020v1 528495 110 - 1977891 ATTTGACCAACTCTAcctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaag-c-ctctaatttggctaaaattccttgcaactgcaaaagagg----aaaaaa i manLeu1.NW_012102020v1 C 0 I 2 s colAng1.NW_012118932v1 410456 111 + 7796314 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattacgggcaacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaaGAGG----aaaaaa i colAng1.NW_012118932v1 C 0 I 4 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=3414845.000000 s hg38.chr3_KI270779v1_alt 88945 969 + 205312 ctaaac-------gaaaa----caaCA---AATCACGTGCTTGGTTTCTGTGTTTGCTTTCTGTCTTA-AAAAACAAACAAACAAAAA--Caacaaatgctctttcacttacttttcttcctccctatacctcctcctgcctttgccatctgcgggaccaaaaaa-atctagagaaggcttccaatgactcgagcccctttaaaggatccggaacaaaggggccactcaccccttccagggtgctctgttttctttgtggagtttcaagagtgatgggcggattcttcttaggtctaaagctctgctgtcttcctgtacggcatgacctgacctctttggctttgggggaaccagagatgaccctgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgag-aactacaaagaaggggtggctgagcacagtttacagggaatggtcttggctgttttttt-gtttttttttttttctcttctaggaagctgtgatttaaggatcctaattctagttcagagatgcatcctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttgggttgtcta--tgtatttgcatgaggaactg-aactgttgttgtcataggtaaatgagagattgagttttctcagctccaaagagaaagggcgtttgctcctcccag-------ccgagtactccatagggtt-catggcgcctctacttgccagagtttatgtaaagtggaagtaatatggtctttctgcacatttacatt---aaaaaaaaag--gagccctgaggttgacctgcaaactgtagagttcctgagtcctcttttttctctagtttcttctctgcctgctttaaatttgctgtta-tttttctattaagataaaaaacactgttt-ggatcagatagtttttctgtttgtaaactggtgaatttgtatttatttcatggctaaatttc-tttttttcttttctttctcttt s panTro5.chr3 200073020 970 + 202621043 ctaaac-------gaaaaaaacCAACA---AATCATGTGCTTGGTTTCTGTGTTTGCTTTCTGTCTTa-aaaaacaaacaaacaaaaa-acaacaaatgctctttcacttacttttcttcctccctatacctcctcctgcctttgccatctgcggtaccaaaaaa-atctagagaaggcttctaatgacttgagcccctttaaaggattcggaacaaaggggccactcaccccttccagggtgctcttttttctttatggagtttcaagagtgatgggcggattcttcttaggtctaaagctctg---tcttcctgtatggcatgacgtgacctctttggctttggaggaaccagagatgaccctgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgag-aactacagagaaggggtggctgagcacagtttacagggaatggtcttggctgtttTTTT---TTTTttttttttctcttctaggaagctgtgatttaaggatcctaattctagttcagagatgcatcctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttgggttgtcta--tgtatttgcatgaggaactg-aactgttgttgtcataggtaaatgagagactgagttttctcagctccaaagagaaagggcgtttgctcctcccag-------ccgagtactccatagggtt-catggtgcctctacttgccagagtttatgtaaagtggaagTAATATGGTCTTTCTGCATGTttacatt---aaaaaaaaaa-agagccctgaggttgacctgcaaactatagagttcctgagtcctcttttttctctagtttcttctctgcctgctttaaatttgctatta-tttttctgttaacataaaaaacactgttt-ggacctgacagtttttctgtttgaaaactggtgaatttgtatttatttcatggctatatttc-tttttttcttttctttctctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 52995 963 + 190779 CTAAAC-------GAAAAAAACCAACA---AATCATGTGCTTGGTTTCTGTGTTTGCTTTCTGTCTTa-aaaaacaaacaaacaaaaa-acaacaaatgctctttcacttacttttcttcctccctatacctcctcctgcctttgccatctgcggtaccaaaaaa-atctagagaaggcttccaatgactcgagcccctttaaagaatccggaacaaaggggccactcaccccttccagggtgctcttttttctttgtggagtttcaagagtgatgggcggattcttattaggtctaaagctctg---tcttcctgtatggcataacgtgacctctttggctttggaggaaccagagatgaccctgcactgtgagaggatttgaccttggcgtgtgtaatggcagacGAG-AACTACAAAGAAGGGGTGGCTGAGCACAGTTTACAGGGAatggtcttggc-----tttg---tttttttttttcttcttctaggaagctgtgatttaaggatcctaattctagttcagagatgcatcctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttgggttgtcta--tgtatttgcatgaggaactg-aactgttgttgtcataggtaaatgagagattgagttttctcagctccaaagagaaagggcgtttgctcctcccag-------ccgagtactccatagggtt-catggtgcctctacttgccagagtttatgtaaagtggaagTAATATGGTCTTTCTGCATGTttacatt---aaaaaaaaa---gagccctgaggttgacctgcaaactatagagttcctgagtcctcttttttctctagtttcttctctgcctgctttaaatttgctgtta-tttttctgttaacataaaaaacactgttt-ggacctgacagtttttctgtttgaaaactggtgaatttgtatttatttcatggctatatttc-tTTTTTtcttttctttctctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 17880 979 + 106623 CTAAAC-------CAAAA-AACTAACA---AGTCATGTGCTTGGTTTCTGTGTTTGCTTTCTGTCTTa-aaaaacaaacaaacaaaaaaacaacaaatgctctttcacttacttttcttcctccctatacctcctcctgcctttg-catctgcggtaccaaaaaa-atctagagaaggcttccaatgactcgagcccctttaaaggatttggaacaaaggggccactcaccccttccagggtgctctgttttctttgtggagtttcaagagtgatggacggattcttctcaggtctaaagctctg---tgttcctgtatggcatgacctgacctctttggctttggaggaaccagagatgaccctgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgagaaactacaaagaaggggtggctgagcacag-ttacagggaatggtcttggctgtttttttgggttttttttttttctcttctaggaagctgtgatttaaggatcctaattctagttcagagatatatcctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctatgtgtatttgcataaggaactgaaactgttgttgtcataggtaaatgagagattgagttttctcagctccaaagagaaagggcgttcgctcctcccag-------ccgagtactccatacggtt-catggtgcctctacttgccagagtttatgtaaagtggaagTAATATGgtctttgtgcacatttacatt---aaaaaaaaaaaagagccctgaggttgacctgcaaactatagagttcctgagtcctcttttttctctgttttcttctctgcctgctttaaatttgctgttattttttctgttaagataaaaaacactgtttgggacctgacagtttttttgtttgaaaactggtgagtttgtatttatttcatggcgatatttcttttttttcttttctttcttttt i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202419373 971 + 204787373 ctaaacTaaccaacaaccaaacaaacaaacaaccaTGCACTTGGTTTCTGTGTTTGCTTTCTGTCTTA-Aaaaaaaaccaacaaaaaaaccaacaaatgctctttcacttacttttcttccaccctatacctcctttcccccttgccatctacagtaccaaaaaacacctagagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccactttcggggtgctctgttttctttgtggagtttcaagagtgataggcagattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggattggaccttggcgtgtgtaatggcagacgag-------aaagaagtggtggctgag--cagtttGCAGGGAATGGtcttggc------------tggttttttttcctcttctaggaagccgtgatgtaaggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctgtgtgcatttggatgaggaactg-aactgttgttttcataggtaaatgagaaattgagttttctcagctccgaagagaaagggcgtttgccccacccagcATGAACCcgagtactccat-cagtt-c-tggtgcctctacttgccagagtttatgtaaagtggaTGTAATATGGTCTTTGTGCACATttacatt---aaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagaattcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgtta-tttttctattaagataaaaaacactgttt-ggatccgacagtttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttc-tTTTTttcttttctttttcttt i rheMac8.chr2 I 1 C 0 s macFas5.chr2 26496 971 + 192460366 ctaaacTaaccaacaaccaaacaaacaaacaaccaTGCACTTGGTTTCTGTGTTTGCTTTCTGTCTTA-Aaaaaaaaccaacaaaaaaaccaacaaatgctctttcacttacttttcttccaccctatacctcctttcccccttgccatctacagtaccaaaaaacacctagagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccgctttcggggtgctctgttttctttgtggagtttcaagagtgataggcagattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggattggaccttggcgtgtgtaatggcagacgag-------aaagaagtggtggctgag--cagtttGCAGGGAATGGtcttggc------------tggttttttttcctcttctaggaagccgtgatgtaaggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctgtgtgcatttggatgaggaactg-aactgttgttttcataggtaaatgagaaattgagttttctcagctccgaagagaaagggcgtttgccccacccagcATGAACCcgagtactccat-cagtt-c-tggtgcctctacttgccagagtttatgtaaagtggatgtaatatggtctttgtgcacatttacatt---aaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagaattcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgtta-tttttctattaagataaaaaacactgttt-ggatctgacagtttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttc-tttttttcttttctttttcttt i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 501321 961 + 19675229 ctaaactaaccaacaaccaaacaaacaaacaaccaTGCACTTGGTTTCTGTGTTTGCTTTCTGTCTTA--------------AAAAAAAccaacaaatgctctttcacttacttttcttccaccctatacctcctttcccccttgccatctacagtaccaaaaaacacctggagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccgctttcggggtgctctgttttctttgtggagtttcaagagcgatgggcagattcttcttaggtctaaagctctg---tcttcctgtgtggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgag-------aaagaagtggtggctgag--cagtttGCAGGGAATGGtcttggc------------tggttttttttcctcttctaggaagccgtgatgtaaggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctgtgtgcatttggatgaggaactg-aactgttgttttcataggtaaatgagaaattgagttttctcagctccgaagagaaagggcgtttgccccacccagcATGAACCcgagtactccat-cagtt-c-tggtgcctctacttgccagagtttatgtaaagtggatgtaatatggtctttgtgcacatttacattaaaaaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagagttcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgtta-tttttctattaagataaaaaacactgttt-ggatctgacagtttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttc-tTTTTTTCTTTTCTTTTTCTTT i macNem1.NW_012014355v1 I 1 I 9793 s cerAty1.NW_012004056v1 437948 970 + 16847902 ctaaaCTaaccaacaaccaaacaaacaaacaaccaTGCACTTGGTTTCTGTGTTTGCTT--TGTCTTA-AAAAAAAAACAACAAAAAAAccaacaaatgctctttcacttacttttcttccaccctatacctccttccccccttgccatctacagtaccaaaaaacacctagagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccgctttcggggtgctctgttttctttgtggagtttcaagagtgataggcagattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaatcagagatgaccttgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgag-------aaagaagcggtggctgag--cagtttGCAGGGAATGGtcttggc------------tggttttttttcctcttctaggaagccatgatttaaggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcactttggcttgtctgtaagcatttggatgaggaactg-aactgttgttttcataggtaaatgagagattgagttttctcagctccgaagagaaagggcgtttgctcctcccagcATGAACCcgagtactccgt-cggtt-c-tggtgcctctacttgccagagtttatgtaaagtggaTGTAATATGGTCTTTGTGCACATttacatt--taaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagagttcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgtta-tttttctattaagataaaaaacactgttt-ggatctgacagcttttttgtttgcaaactggtgaatttgtacttatttcatggctaaatttc-tttttttcttttctttttcttt i cerAty1.NW_012004056v1 I 1 C 0 s manLeu1.NW_012102020v1 528607 963 - 1977891 ctaaac-------caaCCAAACAAACAAA-AACCATGCACTTGGTTTCTGTGTTTGCTT--TGTCTTaaaaaaaaaaacaacaaaaaaaccaacaaatgctcttgcacttacttttcttccaccctatacctccttccccccttgccatctgcagtaccaaaaaaaatctagagaaggcttctaatgact--aatccctttaaaggattcagtac-aaggggccactccctgctttccgagtgctctgttttctttgtggagtttcaagagtgataggcagattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgag-------aaagaagcggtggctgag--cagtttGCAGGGAATGGtcttggc------------tggttttttttcctcttctaggaagccgtgatttagggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctgtgagcatttggatgaggaactg-aactgttgttttcataggtaaatgagagattgagttttctcagctccgaagagaaagggcgtttgctcctcccagcATGAACCcgagtactccgt-cagtt-c-tggtacctctacttgccagagtttatgtaaagtggaagtaacatggtctttgtgcacatttacatt-ttaaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagagttcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgtta-tttttctattaagataaaaaacactgttt-ggatctgacagtttttttgttcgcaaactggtgaatttgtatttatttcatggctaaatttc-tTTTTttcttttctttttcttt i manLeu1.NW_012102020v1 I 2 C 0 s colAng1.NW_012118932v1 410571 957 + 7796314 ctaaac-------caaacaaacaaaccaaaaacCATGTACTTGCTTTCTGTGTTTGCTTTCTGTCTTA---------------CAAAAAccaacaaatgccctttcacttacttttcttccaccctatacctccttccccccttgccatctgcggtacc-aaaaacatctagagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccgctttccgggtgctctgttttctttgtggagtttcaagagtgataggcggattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggatctgaccttggcgtgtgtcatggcagacGAG-AACTACAAAGAAGTGGTGGCTGAG--CAGTTTACAGGGAATGGtcttggc------------t-gtttttttttctcttctaggaagccgtgatttaaggatcctaattctaactcagagatgcattctaaagggtcttctctattgctttttctctcaaaatgaatctcagtttggcttgtctgtgtgcatttggatggggaactg-aactgttgttttcataggtaaatgagagattgagttttctcagctccaaagagaaagggcgtttgctcctcccagcATGAACCcgagtactccat-cggttcc-tggtgcctctacttgccagagtttatgtaaagtggaagtaatatggtctttgtgcacatttacattaaaaaaaaaaaaaaagagccctaaggttgacctgcaaacaatagagttcctgagttctcttttttctctattttcttctctgcctgctttaaatttgctgtca-tttttctattaagataaaaaacactgttt-ggatctgacag-ttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttc-tttttttcttttctttttcttt i colAng1.NW_012118932v1 I 4 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e chlSab2.chr15 376542 7898 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1945.000000 s hg38.chr3_KI270779v1_alt 89914 9 + 205312 ---ttttttttt s panTro5.chr3 200073990 9 + 202621043 ---ttttttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 53958 6 + 190779 ---tttttt--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 18859 6 + 106623 ---ttcttt--- i gorGor5.CYUI01000576v1 C 0 C 0 s colAng1.NW_012118932v1 411528 9 + 7796314 ctttttttt--- i colAng1.NW_012118932v1 C 0 I 9026 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e manLeu1.NW_012102020v1 529570 0 - 1977891 C e chlSab2.chr15 376542 7898 - 91754291 I e cerAty1.NW_012004056v1 438918 0 + 16847902 C e macFas5.chr2 27467 0 + 192460366 C e rheMac8.chr2 202420344 0 + 204787373 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=300993.000000 s hg38.chr3_KI270779v1_alt 89923 142 + 205312 ctttttttttttttgaggcagagtttcactcttgttgcccaggctggagtgcaatggcgtgatcttgggtcaccacagtctcctcttccctggttcaagtgattctcttgcctcagcctcccgagtagctgggattacaggc s panTro5.chr3 200073999 136 + 202621043 ------tttgttttgaggcagagtttcactcttgttgcccaggatggagtgcaacggcgtgatcttgggttaccacagtctccgcttccctggttcaagtgattctcttgcctcagcctcccgagtagctgggattacaggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 53964 136 + 190779 ------tttgttttgaggcagagtttcactcttgttgcccaggatggagtgcaacggcgtgatcttgggtcaccacagtctccgcttccctggttcaagtgattctcttgcctcagcctcccgagtagctgggattacaggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 18865 128 + 106623 ------ttt-------gacagagtttcactcttgttgcccaggctggagtacaatgggatgatctt-ggtcacagcaacctctgcctccctggttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202420344 139 + 204787373 -cttttttttttttgagac--agtttcactcttgttgcccaggctggagtgcaatggagtgatcttggctcactgcaacctccgtctccctggttcaaacgattctcttgcctcagcctcccgagtacctgggattacaggc i rheMac8.chr2 C 0 I 8233 s macFas5.chr2 27467 139 + 192460366 -cttttttttttttgagac--agtttcactcttgttgcccaggctggagtgcaatggagtgatcttggctcactgcaacctccgtctccctggttcaaacgattctcttgcctcagcctcccgagtagctgggattacaggc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 438918 141 + 16847902 -cttttttttttttgagacagagtttcactcttgttgcccaggctggagtgcaatggagtgatcttggctcactgcaacctccgtctccctggttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggc i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 529570 141 - 1977891 -cttttttttttttgagacagagttttactcttgttgcccaggctggagtgcaatgaagtgatcttggctcactgcaacctccgtctccctggttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggc i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e chlSab2.chr15 376542 7898 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=45168.000000 s hg38.chr3_KI270779v1_alt 90065 26 + 205312 atgcaccaccatgcctggctaatttt s panTro5.chr3 200074135 26 + 202621043 atgcaccaccatgcctggctaatttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54100 25 + 190779 atgcaccaccatgcctggctaa-ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 18993 26 + 106623 atgcaccaccatgcccagctaattct i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 27606 26 + 192460366 atgcaccaccatgcccggctaatttt i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 439059 26 + 16847902 atgcaccaccatgcccggctaatttt i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 529711 26 - 1977891 atgcaccaccacgcccggctaatttt i manLeu1.NW_012102020v1 C 0 I 8077 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e chlSab2.chr15 376542 7898 - 91754291 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=132954.000000 s hg38.chr3_KI270779v1_alt 90091 98 + 205312 ttgtatttttagtagagatggggtttctccatgttcgtcaggctggtctccaactcctgacctcaggtgatctgcccgcctcggcctcccaaggtgct s panTro5.chr3 200074161 98 + 202621043 ttatatttttagtagagatggggtttctccatgttggtcaggctggtctccaactcctgacctcaggtgatctgcccgcctcagcctcccaaggtgct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54125 98 + 190779 ttgtatttttagtagagatggggtttctccatgttggtcaggctggtctccaactcctgacctcaggtgatctgcccgcctcagcctcccaaggtgct i panPan2.chrUn_NW_014024201v1 C 0 I 20 s gorGor5.CYUI01000576v1 19019 98 + 106623 ttgtatttttagtagagatggggtttctccatgttggtcaggctggtctccaactcctgacctcagatgatctgcccgcctcggcctcccaaggtgct i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 27632 98 + 192460366 ttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgcctcagcctcccaaggtgct i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 439085 98 + 16847902 ttgtatttttagtagagatggggttcctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgcctcagcctcccaaggtgct i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=269578.000000 s hg38.chr3_KI270779v1_alt 90189 307 + 205312 gggattacaggcgtgagtcaccgcgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgtgtgtgtgtatatatttaaaaggcctttataatttctataattttatgtttaattggcaattaaatctgttttaatttccctccagcacaccagactttttctctccatacgttatgatgtaaa-ttttgctattcgattttcacctcagtttccttaaaatgcaaattcaaggctatttagctgacaaccgcttagagtagtaaaacaggttatcaagaattcgaaggtgtggc s panTro5.chr3 200074259 307 + 202621043 gggattacaggcgtgagtcaccgcgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgcgtgtgtgcatatatTTAAAAGGCCTTTATAatttctgtaattttatgtttaattggcaattaaatctgttttaatttccctccagcacaccagactttttctctccatacgttatgatgtaaa-ttttgctattcgattttcacctcagtttccttaaaatgcaaattcaaggctatttagctgacaaccgcttagagtagtaaaacaggttatcaagaattcgaaggtgtggc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19117 308 + 106623 gggattacaggcgtgagtcaccgcgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgtgtgtgtgtatatatttaaaaggcctttataatttctataattttatgtttaattggcaattaaatctgttttaatttccctccagcacaccagactttttctctccatacgttatgatgtaaatttttgctattcgattttcacctcagtttccttaaaatgcaaattcaaggctatttagctgacaactgcttagagtagtaaaacaggttatcaagaattcgaaggtgtggc i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 27730 307 + 192460366 gggataacaggcatgagccactgtgcccagctttcatggctaaatttttgaagtaaaagctataggatctttgtgtgtgtatgtatatTTAAAAGGCCTTTATAatttctataattttatgtttaattggcaattaaatctgttttaatttccctctagcacaccagactttttctctccataccttatgatgtaaa-ctttgctatttgattttcacctgagtttctttaaaatgcaaattcaacgctatttagctgacaactgcttagagaagtaaaacaggctatcaagaattcaaaggtGTggc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 439183 307 + 16847902 gggattacaggcatgagccaccgtgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgtgtgtgtatgtatatttaaaaggcctttataatttctataattttatgtttaattggcaattaaatctgttttaatttccctctagcacaccagactttttctctccataccttatgatgtaaa-ctttgctatttgattttcacctgagtttctttaaaatgcaaattcaacgctatttagctgacaactgcttagagaagtaaaacaggctatcaagaattcaaaggtGTGGC i cerAty1.NW_012004056v1 C 0 I 7493 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=49702.000000 s hg38.chr3_KI270779v1_alt 90496 116 + 205312 t-gggcacggtggctcacgtctgtaatcctagcattt-gggaggctgagccgcaaagatctcttgaggtcaggagttcaaaaccatcttggccaacatgttgaaaccccgtctctact s panTro5.chr3 200074566 116 + 202621043 t-gggcacggtggctcgcgtctgtaatcctagcattt-gggaggctgagccgcaaagatctcttgaggtcagtagttcaaaaccatcttggccaacatgttgaaaccccgtctctact i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19425 115 + 106623 tggggcacggtggctcacgtctgtaatcctagcattt--ggaggctgagccgcaaagatctcttgaggtcagggattcaaaatcatcctggccaacatggtgaaa-cccatctctact i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 28037 114 + 192460366 -caggtgcagtggctcacgcccgtaatcctagcactttgggaggctgagtctcgaagatctcttgaggtcaggagttcaaaaccatcctggccaacatggtgaaaccctgtct---ct i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 386820 5846 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e cerAty1.NW_012004056v1 439490 7493 + 16847902 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=108300.000000 s hg38.chr3_KI270779v1_alt 90612 180 + 205312 aaaaatacaaaaaaaa-ttagccagat-gtggtggcaggtgcctataatcccagctactcaggaagctgaggcaggagaatcacttgaagccaggaggcagagtttgcagtgagtcgagatcaagccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa s panTro5.chr3 200074682 181 + 202621043 aaaaatacaaaaaaaaattagtcaggt-gtggtggcaggtgcctgtaatcccagctactcaggaagctgaggcaggagaatcacttgaagccaggaggcagaggttgcagtgagtcaagatcaagccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19540 180 + 106623 aaaaatacaaaaacaa-ttagccaggtgggggtggcaggtgcctataatcccagcta-tcaggaagctgaggcaggagaaccacttgaagccaggaggcagaggttgcagtgagtcgagatcaagccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 28151 179 + 192460366 aaaaatacaaaagaa--ttagccgggc-gtggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatggcaggaacccgggaggtggagcttgcagcgaactgagatccggccactgcactccagcctgggcaacagagcgagactccgcctcaaaaaaaaaaaaaga i macFas5.chr2 C 0 I 7377 s otoGar3.GL873829 392666 160 - 608964 AAAAGGAATGaaaaaa-taggctgggc-gtgat-------acctatagtcccagctacttgggaggctgaggcaagagaatcacctaagcccaagagctggaggttgctgtgagttgtgat---gccacagcactctaccgagggcgacaaagtaagactctgtctctaaaa---------- i otoGar3.GL873829 I 5846 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e cerAty1.NW_012004056v1 439490 7493 + 16847902 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=19492.000000 s hg38.chr3_KI270779v1_alt 90792 81 + 205312 aa------aagtaaaaaagaatttgaaggtgtaagaaaaaagctctttatgaatctataagatgaacttctttcagcatacctaata s panTro5.chr3 200074863 87 + 202621043 aagaaagaaagtaaaaaagaatttgaaggtgtaagaaaaaagctctttatgaatctataagatgaacttctctcagcatacctaata i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19720 83 + 106623 aa----aaaagtaaaaaagaatttgaaggtgtaagaaaaaagctctttatgaatctataagatgaacttctctcagcatacctaata i gorGor5.CYUI01000576v1 C 0 C 0 s otoGar3.GL873829 392826 42 - 608964 ---------------------TTTAA--------------------TTAATGATCTTTAA----AAATTTTCTTGGCACAGCTAAGA i otoGar3.GL873829 C 0 I 100 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e cerAty1.NW_012004056v1 439490 7493 + 16847902 I e macFas5.chr2 28330 7377 + 192460366 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=25148.000000 s hg38.chr3_KI270779v1_alt 90873 93 + 205312 catctgtgtatttatgtgttgttgtgtacacagtgttttgctactgaaaatatataaaagagctctaattaattggcttaagaaaataaaagc s panTro5.chr3 200074950 93 + 202621043 catctatgtatttatgtgttgttttgtacacaatgttttgctactgaaaatatataaaagagctctaattaattggcttaagaaaataaaagc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19803 93 + 106623 catctatgtatttatgtgttgttttgtacacagtgttttgctactgaaaatatataaaagagctctaattaattggcttaagaaaataaaagc i gorGor5.CYUI01000576v1 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 392868 100 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e cerAty1.NW_012004056v1 439490 7493 + 16847902 I e macFas5.chr2 28330 7377 + 192460366 I e rheMac8.chr2 202420483 8233 + 204787373 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1115.000000 s hg38.chr3_KI270779v1_alt 90966 2 + 205312 ac s panTro5.chr3 200075043 2 + 202621043 ac i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19896 2 + 106623 ac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830517 2 + 123690457 AT i nomLeu3.chr11 I 8191 C 0 s macFas5.chr2 35707 2 + 192460366 AT i macFas5.chr2 I 7377 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 392868 100 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e macNem1.NW_012014355v1 502282 9793 + 19675229 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I e manLeu1.NW_012102020v1 529737 8077 - 1977891 I e chlSab2.chr15 376542 7898 - 91754291 I e cerAty1.NW_012004056v1 439490 7493 + 16847902 I e rheMac8.chr2 202420483 8233 + 204787373 I a score=12690.000000 s hg38.chr3_KI270779v1_alt 90968 3 + 205312 ttg s panTro5.chr3 200075045 3 + 202621043 ttg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19898 3 + 106623 ttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830519 3 + 123690457 TTg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428716 3 + 204787373 TTg i rheMac8.chr2 I 8233 C 0 s macFas5.chr2 35709 3 + 192460366 TTg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512075 3 + 19675229 TTg i macNem1.NW_012014355v1 I 9793 C 0 s cerAty1.NW_012004056v1 446983 3 + 16847902 TTg i cerAty1.NW_012004056v1 I 7493 C 0 s chlSab2.chr15 384440 3 - 91754291 TTg i chlSab2.chr15 I 7898 C 0 s manLeu1.NW_012102020v1 537814 3 - 1977891 TTg i manLeu1.NW_012102020v1 I 8077 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 392868 100 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e calJac3.chr17 889764 9517 - 74750902 I e saiBol1.JH378146 425860 5171 + 17725628 I e colAng1.NW_012118932v1 411537 9026 + 7796314 I a score=6600.000000 s hg38.chr3_KI270779v1_alt 90971 1 + 205312 g s panTro5.chr3 200075048 1 + 202621043 g i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 19901 1 + 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830522 1 + 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428719 1 + 204787373 g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 35712 1 + 192460366 g i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512078 1 + 19675229 g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 446986 1 + 16847902 g i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384443 1 - 91754291 g i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 537817 1 - 1977891 g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420563 1 + 7796314 g i colAng1.NW_012118932v1 I 9026 C 0 s calJac3.chr17 899281 1 - 74750902 g i calJac3.chr17 I 9517 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 392868 100 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e panPan2.chrUn_NW_014024201v1 54223 20 + 190779 I e saiBol1.JH378146 425860 5171 + 17725628 I a score=48005.000000 s hg38.chr3_KI270779v1_alt 90972 9 + 205312 ctgggtgca s panTro5.chr3 200075049 9 + 202621043 ctgggtgca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54243 9 + 190779 ctgggtgca i panPan2.chrUn_NW_014024201v1 I 20 C 0 s gorGor5.CYUI01000576v1 19902 9 + 106623 ctgggtgca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830523 9 + 123690457 ctgggcgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428720 9 + 204787373 ccgggcgcg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 35713 9 + 192460366 ccgggcgcg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512079 9 + 19675229 ccgggcgcg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 446987 9 + 16847902 ccaggtgcg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384444 9 - 91754291 ccgggcgca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 537818 9 - 1977891 ccgggcgcg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420564 9 + 7796314 ctgggcgcg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899282 9 - 74750902 ctgggcccg i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 392868 100 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 37418 9987 - 69927 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e saiBol1.JH378146 425860 5171 + 17725628 I a score=116723.000000 s hg38.chr3_KI270779v1_alt 90981 15 + 205312 gtggctcatgcctgt s panTro5.chr3 200075058 15 + 202621043 gtggctcacgcctgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54252 15 + 190779 gtggctcacgcctgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 19911 15 + 106623 gtggctcacgcctgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830532 15 + 123690457 gtggctcacgcctgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428729 15 + 204787373 gtggctcaggcctgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 35722 15 + 192460366 gtggctcaggcctgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512088 15 + 19675229 gtggctcaggcctgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 446996 15 + 16847902 gtggctcaggcctgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384453 15 - 91754291 gtggctcaggcctgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 537827 15 - 1977891 gtggctcaggtctgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420573 15 + 7796314 gtggctcaggcctgt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899291 15 - 74750902 gtggctcatgcctgt i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 47405 15 - 69927 gtggctcgtgcctgt i aotNan1.NW_018503669v1 I 9987 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e otoGar3.GL873829 392868 100 - 608964 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e saiBol1.JH378146 425860 5171 + 17725628 I a score=653165.000000 s hg38.chr3_KI270779v1_alt 90996 105 + 205312 actcccagcactttgggaggctgaggtaggtagatcacctgaggtcaggagtttgagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaa s panTro5.chr3 200075073 105 + 202621043 actcccagcactttgggaggctgaggtgggtagatcacctgaggtcaggagttcgagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54267 105 + 190779 actcccagcactttgggaggctgaggtgggtagatcacctgaggtcaggagttcgagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 19926 105 + 106623 actcccagcactttcggaggctgaggcaggcggatcacctgaggtcaggagttcgacacaagcctggccaacatggtgaaaccccgtctctactaaaaatacaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830547 105 + 123690457 aatcccagcactttgggaggccaaggcaggcggatcacatgaggtcaggagttcgagacaagcctggccaacatggtgaaaccccgtctctactaaaaatataaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428744 105 + 204787373 catcccagcactttgggaggccaaggcgggcgaatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccgtctctaccataaatacgaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 35737 105 + 192460366 catcccagcactttgggaggccaaggcgggcgaatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccgtctctaccataaatacgaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512103 105 + 19675229 catcccagcactttgggaggccaaggcgggcaaatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccgtctctaccataaatacgaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447011 105 + 16847902 catcccagcattttgggaggccaaggcgggcggaccgcctgaggtcaggagttcaagacaagcctggccagtatggtgaaaccccgtctctaccataaatacgaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384468 105 - 91754291 catcccagcactttgggaggccaaggcgggcggatcgcctgaggtcaggagttcaagacaagcctggccagcatggtgaaaccccgtctctaccataaatacgaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 537842 105 - 1977891 catcccagcactttgggaggccaaggcgggcgaatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccatctctaccataaatacaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420588 105 + 7796314 catcccagcactttgggaggccaaggcggggggatcacctgaggtcaggagttcaagacaagcctggccagtatggtgaaaccccatctctaccataaatacaaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899306 96 - 74750902 aatcccagcatttttggaggccaaagcaggcaa-tcgc-tcaggtcaggaggttgagaacagcctggccaacatggtgacattttgt-------aaatataccaa i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 47420 96 - 69927 aatcccagcattttgggaggccgaagcaggcag-tcac-tcaggtcaggaggttgagaacagcctggacaacatggtgaaattttgt-------aaatataccaa i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 392968 56 - 608964 -ACCCCAG--GTACGGGGGAGAGTGGTATGTGG--------------------------------GGCAGTAATGGTGAAATACCATCTCC-------------- i otoGar3.GL873829 I 100 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e cebCap1.NW_016107444v1 384850 8350 - 6778120 I e saiBol1.JH378146 425860 5171 + 17725628 I a score=865018.000000 s hg38.chr3_KI270779v1_alt 91101 114 + 205312 aattagcccgacgtggtggtgcgcgcctataatcccagctactccagaggctgaggcaggagaattgttggatcccgggaggaagaggtttcattgagctgagatctcattact s panTro5.chr3 200075178 114 + 202621043 aattagctgggcgtgatggtgcgcgcctgtaatcccagctactccagaggctgaggcaggagaattgtttgatcccgggaggaagaggtttcactgagctgagatctcattact i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54372 114 + 190779 aattagctgggcgtggtggtgcgcgcctgtaatcccagctactccagaggctgaggcaggagaattgtttgatcccgggaggaagaggtttcactgagctgagatctcattact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20031 113 + 106623 aattagcccagcatggtggcacacacctgtaatcccagctact-cggaggctgaggcaggagaattgcttgatcccaggaggaagaggtttcaatgagccgagatctcactact i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830652 114 + 123690457 aattatccgggcgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgatcccaggaggaagaggtttcaatgagctgagatctcactact i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428849 113 + 204787373 aattagctgggcgtggtggcg-gcgcctgtaatcccaactgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcagtgagctgagatctcactgct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 35842 113 + 192460366 aattagctgggcgtggtggcg-gcgcctgtaatcccaactgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcagtgagctgagatctcactgct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512208 113 + 19675229 aattagccgggcgtggtggcg-gcgcctgtgatcccaactgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcagtgagctgagatctcactgct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447116 113 + 16847902 aattagctgggcgtggtggca-gcacctgtaatcccaactgctcgggtggctgaggcgggagaattgcttgaacccaggaggaagaggtttcagtgagccgagatctcactgct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384573 114 - 91754291 aattagctgggcatggtggcgcacgcctgtaatcccaactactcgggtggctgaggcaggagaattgcttgatcccggggggaagaggtttcagtgagctgagatctcactgct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 537947 113 - 1977891 aattagctgggcgtggtggcg-gcacctgtgatctcaactgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcggtgagctgagatctcactgct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420693 113 + 7796314 aattagctgggcgtggtggcg-cacgctataatcccaactactcgggcggctgaggcaggagaattgcttgatcccgggaggaagaggtttcagtgagctgagatctcactgct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899402 114 - 74750902 aattagccaggcgtggtggcaggcatctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggtttcagtgagctgagatctcactact i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 393200 114 - 6778120 aattagccaggcgtggtggcaggcgtctgtaatcccagctactcgggagactgaggcaggagaatcgcttgaacccaggaggcggtggtttctgtgagctgagatctcactact i cebCap1.NW_016107444v1 I 8350 C 0 s aotNan1.NW_018503669v1 47516 114 - 69927 aattagccaggcatggtggcaggtatctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaagtttcagtgagctgagatctcactact i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393024 41 - 608964 ---------------------------------CCTGGCCACCCCAAATGC---------------------------AAGAAAGAGG----GGTGA------ATATCACT--- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e saiBol1.JH378146 425860 5171 + 17725628 I a score=352097.000000 s hg38.chr3_KI270779v1_alt 91215 58 + 205312 gtacactccagcctgggtgacagagcaagactccatctc--aa----aaa--------------aaaaaaaag---aaGCT s panTro5.chr3 200075292 55 + 202621043 gtacactccagcctgggtgacagagcaagacaccatctc--aa----aaa--------------aaaaaaaaG------CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54486 54 + 190779 gtacactccagcctgggtgacagagcaagactccatctc--aa----aaa--------------aaaaaaaG-------CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20144 52 + 106623 gtacactccagcctggacaacagagagagactccatgtc--aa----aaa--------------aaaaaG---------CT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830766 53 + 123690457 gtacactccagcctgggcaacagagcaagactccatgtc--aa----aaa--------------aaaaaaG--------CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202428962 61 + 204787373 gtacactccagcctgggcgacagggcgagactccatctc--aa----aaa--------------caaacaaaaaaaaaGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 35955 61 + 192460366 gtgcactccagcctgggcgacagggcgagactccatctc--aa----aaa--------------caaacaaaaaaaaaGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512321 65 + 19675229 gtacactccagcctgggcgacagggcgagactccatctc--aaaaacaaa--------------caaacaaacaaaaaGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447229 60 + 16847902 gtgcactccagcctgggcgacagggcgagaccccatctc--aa----aaa---------------aaaaaaaaaaaaaGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384687 66 - 91754291 gtacactccagcctgggcgacagagcgagactccatctca-aaaaaaaaa--------------aaaaaaaaaaaaaaGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538060 65 - 1977891 gtgcactccagcctgggcgacagggcgagactccatctc--aaaacaaaa--------------acaaaaacaaaaaaGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420806 67 + 7796314 gtacactccagcctgggcgacagcgcgagactccagctcacaaaaaaaaa--------------aaaaaaaaaaaaaaGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899516 75 - 74750902 gtgcactccagcctgggcgacagagcgagactccatctc--aa----aaaaaaaccccaaaaccaaaaacaaCAGGAACCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431031 75 + 17725628 Gtgcactccagcctgggcgacagagcgcgactccatctc--ag----aaaaaaccaccaaaaacaaaaaCAACAAGAACTT i saiBol1.JH378146 I 5171 C 0 s cebCap1.NW_016107444v1 393314 75 - 6778120 gtgcactctagcctgggcgacagagcgagactccatctc--aa----aaaaaaaaaccaaaacctaaaacaacaagaaCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47630 59 - 69927 gtgcactccagcctgggcaacacagcgagactccatctc--aa----aaa-------------caaaaGCAAC---AACCT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393065 5 - 608964 ----------------------------------------------------------------------------GTAGA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e mm10.chr16 65405221 4922 - 98207768 I e dasNov3.JH569502 3860860 1617 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=21239.000000 s hg38.chr3_KI270779v1_alt 91273 2 + 205312 AG s panTro5.chr3 200075347 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54540 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20196 2 + 106623 AC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830819 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429023 2 + 204787373 AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36016 2 + 192460366 AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512386 2 + 19675229 AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447289 2 + 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384753 2 - 91754291 AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538125 2 - 1977891 AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420873 2 + 7796314 AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899591 2 - 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431106 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393389 2 - 6778120 GG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47689 2 - 69927 AG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393070 2 - 608964 AA i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3862477 2 + 6579706 AG i dasNov3.JH569502 I 1617 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I a score=566145.000000 s hg38.chr3_KI270779v1_alt 91275 54 + 205312 TGATTCCATATCTTCAAATCAAATTTCAGTGG--AGTGTTTACCGGGCAAGGAAGG s panTro5.chr3 200075349 54 + 202621043 TGATTCCATATCTTCAAATCAAATTTCAGTGG--AGTGTTTACCAGGCAAGGAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54542 54 + 190779 TGATTCCATATCTTCAAATCAAATTTCAGTGG--AGTGTTTACCAGGCAAGGAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20198 54 + 106623 TGATTCCACATCTTCAAATCAAATTTCAGTGG--AGTGTTTACTGGGCAAGGAAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830821 49 + 123690457 TGATTCCATATCTTCAAATCAAATTTC-------AGTGTTTACTAGGCAAGGAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429025 54 + 204787373 TGATTCCACATCTTCAAATCAAATTTCAGCGG--AGTGTTTACTGGGCAAGCAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36018 54 + 192460366 TGATTCCACATCTTCAAATCAAATTTCAGCGG--AGTGTTTACTGGGCAAGCAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512388 54 + 19675229 TGATTCCACATCTTCAAATCAAATTTCAGCGG--AGTGTTTACTGGGCAAGCAAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447291 54 + 16847902 TGATTCCACATCTTCAAATCAAATTTCAGTGG--AGTGCTTACTCGGCAAGCAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384755 54 - 91754291 TGATTCCACATCTTCAAATCAAATTTCAGCCG--AGTGTTTACTGGGCCAGGAAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538127 54 - 1977891 TGATTCCACATCTTCAAATCAAATTTCAGCGG--AGTGTTTACTGGGCAAGCAAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420875 54 + 7796314 TGATTCCACATCTTCAAATCAAATGTCAGTGG--AGTGTTTACTGGGCCAGGAAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899593 54 - 74750902 TGATTTCATATCTTCAAATCAAATTTCAGAGG--AGAAATTACTGGGCAAGGAAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431108 54 + 17725628 TGATTTCCTATCTTCAAATCAAATTTCGGAGG--AGAAATTACTGGGCAAGGAAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393391 54 - 6778120 TGATTTCATATCTTCAAATCAAATTTCAGAGG--AGAAATTACTGGGCAAGGAAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47691 54 - 69927 TGATTTCATCTCTTCAAATCAAATTTCAGAGG--AGAAATTACTGGGCAAGGAAGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393072 41 - 608964 TGATTCCATATCCTCAAATCAAACTTC--------------ACTGGGCAAAGGGG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410143 41 - 98207768 TGATGCCATATCTTCAAATCAGA--------G--AG-----GCAAGGCATGGGAGT i mm10.chr16 I 4922 C 0 s dasNov3.JH569502 3862479 56 + 6579706 TGGTTCCATTTCTTCAAACCCAAAGTCAGTGGGTAGCAGTCACAGGGCAGGGTGCG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e micMur3.chr1 25872912 4970 - 114275543 I e canFam3.chr33 29041967 5697 + 31377067 I a score=36290.000000 s hg38.chr3_KI270779v1_alt 91329 2 + 205312 CA s panTro5.chr3 200075403 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54596 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20252 2 + 106623 CA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830870 2 + 123690457 CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429079 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36072 2 + 192460366 CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512442 2 + 19675229 CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447345 2 + 16847902 CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384809 2 - 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538181 2 - 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420929 2 + 7796314 CA i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 899647 2 - 74750902 CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431162 2 + 17725628 CA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393445 2 - 6778120 CA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47745 2 - 69927 CA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25877882 2 - 114275543 CA i micMur3.chr1 I 4970 C 0 s otoGar3.GL873829 393113 2 - 608964 CA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410184 2 - 98207768 CA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3862535 2 + 6579706 CA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7393935 3784 + 22200726 I e canFam3.chr33 29041967 5697 + 31377067 I a score=594892.000000 s hg38.chr3_KI270779v1_alt 91331 52 + 205312 GGGGG-GTCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT s panTro5.chr3 200075405 51 + 202621043 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54598 52 + 190779 GGGGG-GTCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20254 37 + 106623 GGGGG-GTCAGCTTG-CTGACAG-----------------------CCTCAGCCTGCACATT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830872 53 + 123690457 GGGGGGGTCAGCCTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429081 51 + 204787373 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36074 51 + 192460366 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512444 51 + 19675229 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447347 51 + 16847902 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384811 50 - 91754291 -GGGG--TCAGCTTG-CTGACAGA--------CTCGACCTGCCAGCCCGCAGCCTGCACATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538183 51 - 1977891 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420932 51 + 7796314 GGGGG--TCAGCTTG-CTGACAGC--------CTCAACCTGCCAGCCCTCAGCCTGCACATT i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 899649 42 - 74750902 GGGGGTGTTAGCTTG-CTGACAGC--------CCCAACCT-----------GCCTGTACGTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431164 51 + 17725628 GCGGG-GTCAGCGTG-CTGACAGC--------CCCAACCTGCC-ACGCTCAGCCTGCACGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393447 50 - 6778120 GGGGG-GTCAG-TTG-CTGACAGC--------CCCAGCCTGCC-ACGCTCAGCCTGCACATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47747 52 - 69927 GGGGG-GTCAGCTTG-CCGACAGC--------CCCAACCTGCCGACGCTCAGCCTGCATATT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25877884 52 - 114275543 GGAGG-GTTAGCCTG-CTGACAGC--------CCCAACCTGTCAGCTCTCAGCGTGCACATT i micMur3.chr1 C 0 I 39 s proCoq1.NW_012133858v1 7397719 52 + 22200726 GGGGA-GTTAGCTTG-CTGACAGC--------CCCAACCTGTCAGCTCTCAGCGTGCACATT i proCoq1.NW_012133858v1 I 3784 I 34 s otoGar3.GL873829 393115 51 - 608964 GGAGG-GTT-GCTTG-CTGACAAC--------CCCAACCTGTCAGTTCTCGACCTGCACTTT i otoGar3.GL873829 C 0 I 5 s mm10.chr16 65410186 43 - 98207768 GGGTG-GGGAG------TGGGACC--------ATGAACCTGCTG----TCAGCCTGCACATT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3862537 62 + 6579706 GGAGGTGGCAGCGTGCCTGAGAGCCCTGGACGCCTAACCTGGTAGCTCCTAGCCGGCGCATT i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29041967 5697 + 31377067 I a score=31857.000000 s hg38.chr3_KI270779v1_alt 91383 7 + 205312 TGTGATC s panTro5.chr3 200075456 7 + 202621043 TGTGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54650 7 + 190779 TGTGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20291 7 + 106623 TGTGATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120830925 7 + 123690457 TGTGATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429132 4 + 204787373 TGTG--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36125 4 + 192460366 TGTG--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512495 4 + 19675229 TGTG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447398 4 + 16847902 TGTG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 384861 4 - 91754291 TCTG--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538234 4 - 1977891 TGTG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 420983 4 + 7796314 TGTG--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899691 7 - 74750902 TCTGATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431215 7 + 17725628 TGTGATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393497 7 - 6778120 TGTGGTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47799 7 - 69927 TGTGATC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393171 7 - 608964 TGTGGTC i otoGar3.GL873829 I 5 C 0 s mm10.chr16 65410229 7 - 98207768 TGTGGTC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3862599 7 + 6579706 TGTGATC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7397771 34 + 22200726 I e micMur3.chr1 25877936 39 - 114275543 I e canFam3.chr33 29041967 5697 + 31377067 I a score=41459.000000 s hg38.chr3_KI270779v1_alt 91390 5 + 205312 ACCTG s panTro5.chr3 200075463 5 + 202621043 ACCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54657 5 + 190779 ACCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20298 5 + 106623 ACTTG i gorGor5.CYUI01000576v1 C 0 I 22 s nomLeu3.chr11 120830932 5 + 123690457 ACCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429136 2 + 204787373 ---TG i rheMac8.chr2 C 0 I 22 s macFas5.chr2 36129 2 + 192460366 ---TG i macFas5.chr2 C 0 I 22 s macNem1.NW_012014355v1 512499 2 + 19675229 ---TG i macNem1.NW_012014355v1 C 0 I 22 s cerAty1.NW_012004056v1 447402 2 + 16847902 ---TG i cerAty1.NW_012004056v1 C 0 I 22 s chlSab2.chr15 384865 2 - 91754291 ---TG i chlSab2.chr15 C 0 I 22 s manLeu1.NW_012102020v1 538238 2 - 1977891 ---TG i manLeu1.NW_012102020v1 C 0 I 22 s colAng1.NW_012118932v1 420987 2 + 7796314 ---TG i colAng1.NW_012118932v1 C 0 I 22 s calJac3.chr17 899698 5 - 74750902 ATCTG i calJac3.chr17 C 0 I 22 s saiBol1.JH378146 431222 5 + 17725628 ACCTG i saiBol1.JH378146 C 0 I 22 s cebCap1.NW_016107444v1 393504 5 - 6778120 ACCTG i cebCap1.NW_016107444v1 C 0 I 21 s aotNan1.NW_018503669v1 47806 5 - 69927 ACCTG i aotNan1.NW_018503669v1 C 0 I 22 s proCoq1.NW_012133858v1 7397805 5 + 22200726 ACCTG i proCoq1.NW_012133858v1 I 34 C 0 s otoGar3.GL873829 393178 5 - 608964 ACCTG i otoGar3.GL873829 C 0 I 22 s mm10.chr16 65410236 5 - 98207768 ACCCG i mm10.chr16 C 0 I 22 s dasNov3.JH569502 3862606 5 + 6579706 ACCTG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25877936 39 - 114275543 I e canFam3.chr33 29041967 5697 + 31377067 I a score=1753140.000000 s hg38.chr3_KI270779v1_alt 91395 149 + 205312 GTCACACAC------------------CTGGGCAGGAGGC-TGC----CCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGG----TACCCGC---GAGAGACAGC---CAGCAGTTCTGTGGAGCAG-------CGGT---------GGCCGG--------CTAGGATGGGCTGTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT s panTro5.chr3 200075468 149 + 202621043 GTCACACAC------------------CTGGGCAGGAGGC-TGC----CCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGG----TACCCGC---GAGAGACAGC---CAGCAGTTCTGTGGAGCAG-------CGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54662 149 + 190779 GTCACACAC------------------CTGGGCAGGAGGC-TGC----CCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGG----TACCTGC---GAGAGACAGC---CAGCAGTTCTGTGGAGCGG-------CGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20325 147 + 106623 GTCACACAC------------------CTGGGCAGGAGGC-TGC----CCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGG----TACCCGC---GAGAGACAGC---CAGCAGTTCTGTGGAGCGG-------CGGT---------GGCCGG--------CTAGGATGGGC--TCTCTGGGGTCTGACTCTGTCCCTTTTCTTCT i gorGor5.CYUI01000576v1 I 22 C 0 s nomLeu3.chr11 120830937 153 + 123690457 GCCACACAC------------------CTGGGCAGGAGGC-TGCCCCTCCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGG----TACCCGT---GAGAGACAGC---CAGCAGTTCTGTGGGGCAG-------CAGT---------GGCCAA--------CTAGGATGGGCTGTCTCTGGGGTCTGACTCTGCTTCTTTTCTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429160 145 + 204787373 GTCACACAC------------------CTCGGCAGGAGGC-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCCGT-----GAGACGGC---CAGCAGTTCTGC--AGCAG-------CGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i rheMac8.chr2 I 22 C 0 s macFas5.chr2 36153 145 + 192460366 GTCACACAC------------------CTCGGCAGGAGGC-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCCGT-----GAGACGGC---CAGCAGTTCTGC--AGCGG-------CGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i macFas5.chr2 I 22 C 0 s macNem1.NW_012014355v1 512523 145 + 19675229 GTCACACAC------------------CTCGGCAGGAGGC-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCCGT-----GAGACGGC---CAGCAGTTCTGC--AGCAG-------CGGT---------GGCTGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i macNem1.NW_012014355v1 I 22 C 0 s cerAty1.NW_012004056v1 447426 145 + 16847902 GTCACACAC------------------CTCTGCAGGAGGC-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCCGT-----GAGACGGC---CAGCAGTTCTGC--AGCGG-------CGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i cerAty1.NW_012004056v1 I 22 C 0 s chlSab2.chr15 384889 145 - 91754291 GTCACACAC------------------CTCGGCAGGAGAT-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCCGT-----GAGACAGC---CAGCAGTTCTGC--AGTGG-------TGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTAT i chlSab2.chr15 I 22 C 0 s manLeu1.NW_012102020v1 538262 145 - 1977891 GTCACACAC------------------CTCGGCAGGAGGC-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCCGT-----GAGACGGC---CAGCAGTTCTGC--AGCGG-------CGGT---------GGCCGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i manLeu1.NW_012102020v1 I 22 C 0 s colAng1.NW_012118932v1 421011 145 + 7796314 GTCACACAC------------------CTCGGCAGGAGGC-GGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGG----TACCTGT-----GAGACAGC---CCACAGTTCTGC--AGTGG-------CGGT---------GGCCGG--------CCAGGATGGGCCGTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCT i colAng1.NW_012118932v1 I 22 C 0 s calJac3.chr17 899725 138 - 74750902 GTCACACAC------------------CTGGGCAGGAGGC-TGC----CCCTCCTCTCCGGTTTAAGGAAGCAGGAAAAAGCGGCCGGCCGTCTGCGGAGACAG--------------GCAGCGC-----------------------CCTGG--------CTAGGATGGGCTCTCTCTGGGGTCTGGTTCTGCCCCTTTTCTTTT i calJac3.chr17 I 22 C 0 s saiBol1.JH378146 431249 148 + 17725628 GTTGCACGC------------------CTGGGCGGGAGGC-GGC----CCCTCCTCTCCGGTTTAAGGAAGCAGGAAAAGG----CGGCCGTCTGCGGAGACAG----------GTCTGCGGAGCAG-------TGGT----GT--CGCCCGG--------CCGGGATGGGCTCTCTCTGGGGTCTGGTTCTGCCCCTTTTCTTTT i saiBol1.JH378146 I 22 C 0 s cebCap1.NW_016107444v1 393530 148 - 6778120 GTCACACAC------------------CTGGGCAGGAGGC--GC----CTCTCCTCTCCGGTTTAAGGAAGCAGGAAAAGG----TGGCCCTCTGCGAAGACAG----------GTCTGCGGAGCGG-------TGGC---AGT--GCCCCGG--------CCAGGATGGGCTCTCTCTGGGGTCTGCTTCTGCCCCTTTTCTTTT i cebCap1.NW_016107444v1 I 21 C 0 s aotNan1.NW_018503669v1 47833 150 - 69927 GT--CACAC------------------CTGGGCAGAAGGC-TGC----CCCTCCTCTCCGGTTTAAGGAAGCAGGAAAAGG----TGGCCGTCTGCGGAGACAG----------GTCTGCGGAGCGG-------TGGCGGCGGC--GCCCTGG--------CTAGGATGGGCTCTCTCTGGGGTCTGCTTCTGACCCTTTTCTTTT i aotNan1.NW_018503669v1 I 22 C 0 s micMur3.chr1 25877975 157 - 114275543 GTCACACAC------------------CCAGGCAGGAGGCCTGC----CCCTCCTCCCCGGGTTGAGGAAACAGGAAAAGG----CGACCA----GAGAGGCAGC---AAGCAGGTCTGCAGAGCGG-------CAGT---------GGCTGGTGCCCCAGCCGGGATGGGCTCTCTCTGGGGCCTGGCTCTGCCCCTTTTCTTCT i micMur3.chr1 I 39 I 344 s proCoq1.NW_012133858v1 7397810 155 + 22200726 GCCATACAC------------------CTGGGCAGAAGGCCTGC----CCCTCCTCCCCGGGTTGAGGAAACAGGAAAAGG----TGGCCCT---GAGAGGCAGT---GAGCAGGTCTGCAGAGCAG-------CGGT---------GGCCAGCGCCCTGGCTAGGATGGGCTCTCTCTGGGGCCTGGCTCTGCCCCTTTTCT--- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 393205 167 - 608964 GTCACACAT------------------CTAGGCAGGAGGCCTGC----CCCTCCTCCCTGGCTCAAGGAAACAGGAAAAGG----TGGCCCT---AAGAGGCAGCAGTGAGCAGGTCTGAAGAGCAGTGGGGCCCAGT---------AGCCTGTGCCCCA-CTAGGATGGGCTCTCTCTGGGGCCTGGCCCTGCCCCTTCTCTTCT i otoGar3.GL873829 I 22 C 0 s mm10.chr16 65410263 153 - 98207768 GT--CACAC------------------CTGGGCAGTCGTC-TGC----CCCTCCTCCCGGGGTTGAGGAAGCAGGAAAGGG----TGGTGAG---GAGAGACAGC---AGGCAGGTCCGGCAGACAG-------CGGT---GGTCAGGGCCAG--------GCACGATGGGCTCTGTCTGGGGCCTGGCTGTGCCCCTCCTTGTCT i mm10.chr16 I 22 C 0 s dasNov3.JH569502 3862611 152 + 6579706 GCTGCATGCTGGGACTACCCAGGCCCACCAGGCAGGTGGCCCAG----CCCTTCTCCTTGGGCTGGGGAAGCAGGAA--GG----T--CAGT---GAGACGCAGC---AGGCACGTCTGC--CACAG----------------------------------CCAGGATGGGCTCTCTCTGGGGCCTGGCTCTACCCCTTTTCTTTT i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29041967 5697 + 31377067 I a score=174659.000000 s hg38.chr3_KI270779v1_alt 91544 11 + 205312 TCTGCTGGGAG s panTro5.chr3 200075617 11 + 202621043 TCTGCTGGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54811 11 + 190779 TCTGCTGGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20472 11 + 106623 TCTGCTGGGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831090 11 + 123690457 TCTGCTGGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429305 11 + 204787373 TCTGCTGGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36298 11 + 192460366 TCTGCTGGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512668 11 + 19675229 TCTGCTGGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447571 11 + 16847902 TCTGCTGGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385034 11 - 91754291 TCTGCTGGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538407 11 - 1977891 TCTGCTGGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421156 11 + 7796314 GCTGCTGGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899863 11 - 74750902 TCTGCTGGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431397 11 + 17725628 TCTGCTGGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393678 11 - 6778120 TCTGCTGGGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47983 11 - 69927 TCTGCTGGGAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7397965 11 + 22200726 TCTGCTGGGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 393372 8 - 608964 ---GCTGGAAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410416 11 - 98207768 TCTGCTGGAAG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3862763 11 + 6579706 GCTGCTAGAAG i dasNov3.JH569502 C 0 I 8458 e micMur3.chr1 25878132 344 - 114275543 I e canFam3.chr33 29041967 5697 + 31377067 I a score=377698.000000 s hg38.chr3_KI270779v1_alt 91555 31 + 205312 GTTGGGGTCTCTGGGAGCTCTGCAGGTAAGG s panTro5.chr3 200075628 31 + 202621043 GTTGGGGTCTCTGGGAGCTCTGCAGGTAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54822 31 + 190779 GTTGGGGTCTCTGGGAGCTCTGCAGGTAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20483 31 + 106623 GTTGGGGTCTCTGGGAGCTCTGCAGGTAAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831101 31 + 123690457 GTTGGGGTCCCTGGGAGCTCTGCAGGTAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429316 31 + 204787373 GTTGCGGTGTCTGAGATCTCTGCAGGTAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36309 31 + 192460366 GTTGCGGTGTCTGAGATCTCTGCAGGTAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512679 31 + 19675229 GTTGCGGTGTCTGAGATCTCTGCAGGTAAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447582 31 + 16847902 GTTGCGGTGTCTGAGATCTCTGCAGGTAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385045 31 - 91754291 GTTGCGGTGTCTGAGATCTCTGCAGGTAAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538418 31 - 1977891 GTTGCGGTGTCTGAGATCTCTGCAGGTAAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421167 31 + 7796314 GTTGCAGTCTCTGGGAGCTCTGCAGGTAAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899874 31 - 74750902 GCTGGGGTCTCTGGGAGTGCTGCAGGTAAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431408 31 + 17725628 GCTGGGGTCTCTGGGAGCGCTGCAGGTAAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393689 31 - 6778120 GCTGGGGTCTCTGGGAGCGCTGCAGGTAAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 47994 31 - 69927 GCTGGGGTCTCTGGGAGCGCTGCAGGTAAGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7397976 31 + 22200726 GCTGGGCTGTCTGGCAGCTCCACAGGTGAGG i proCoq1.NW_012133858v1 C 0 I 121 s otoGar3.GL873829 393380 31 - 608964 GCTGGGCTGTCTGGGAGCTCTGCAGGTAAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410427 31 - 98207768 GTTGGCGTCAGTGTGAGCTCTCCAGGTAAGG i mm10.chr16 C 0 C 0 e micMur3.chr1 25878132 344 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=949116.000000 s hg38.chr3_KI270779v1_alt 91586 125 + 205312 ---AGGCCTAGAAGGGCCTGGTGGGCCTCTCCCCTAGTAGGGCTCTGGGAGTGAATTTCAGTATGAGCCACCCTTCATGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAATGAACCACAGTGCTACT s panTro5.chr3 200075659 124 + 202621043 ---AGGCC-AGAGGGGCCTGGTGGGCCTCTCCCCTAGGGGGGCTCTGGGAGTGAATTTCAGTATGAGCCACCCTTCATGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAATGAACCACAGTGCTACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54853 124 + 190779 ---AGGCC-AGAGGGGCCTGGTGGGCCTCTCCCCTAGGGGGGCTCTGGGAGTGAATTTCAGTATGAGCCACCCTTCATGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAATGAACCACAGTGCTACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20514 125 + 106623 ---AGGCCTAGAAGGGCCTGGTGGGCCTCTCCCCTAGTGGGGCTCTGGGTGTGAATTTCAGTATGAGCCGCCCTTCATGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAATGAATCACAGTGCTACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831132 124 + 123690457 ---AAGCC-AGAGGGGCCTGGTGGGCCTCTCCCCTAGTGGGGCTCTGGGAGGGAATTTCAGTATGAGCCACCCTTCACGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAAGGAACCACAGGGCTACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429347 109 + 204787373 ---AGGCC-AGAGGGG-CTGGTGGGCCTCCCCCCTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36340 109 + 192460366 ---AGGCC-AGAGGGG-CTGGTGGGCCTCCCCCCTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512710 109 + 19675229 ---AGGCC-AGAGGGG-CTGGTGGGCCTCCCCCCTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447613 109 + 16847902 ---AGGCC-AGAGGGG-CTGGTGGGCCTCCCCCCTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385076 109 - 91754291 ---AGGCC-AGAGGGG-CTGGTGGGCCTCTCCCCTCATGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGACAAGGGCAGGCTCTCTTGGGTTGATGACAAGGAACCACAGTGCTACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538449 109 - 1977891 ---AGGCC-AGAGGGG-CTGGTGGGCCTCCCCCGTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421198 110 + 7796314 ---AGGCC-AGAGGGGCCTGGTGGGCCTCTCCCGTCGTGAGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCGCTCTTGGGTTGATTATAAAGAACCATGGTGCTACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 899905 120 - 74750902 ---AGGCC-AGACTTC-CTGGTGGGCTTCTTCCCTAGTGGGGCTCCGGGAGTGAATTTCAGTATGGGCAGCCTTTCCTGGGC-AGGGTAGGCTCTC--AGGATGATTAGAATGAGCCACAGTGCTACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431439 109 + 17725628 ---AGGCC-AGACGTC-CCGGTGGGCTTCTTCCCTAGTGGGG-TCCGGGAGTGAATTTCAGTATGGGCAGCCTTTCATGGGC-AGGGTAGGCTCTC--GGGTTGATTGGAATGAAC----------CA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393720 119 - 6778120 ---AGGCC-AGACGTC-CTGGTGGGCTTCTTTCCTAGTGGGG-TCCGGGAGTGAATTTCAGTGTGGGCAGCCTTTCATGGGC-AGGGCAGGCTCTC--GGGTTGATTAGAATGGACCACAGTGCTACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48025 120 - 69927 ---AGGCC-AGACGTC-CTGGGGGGCTTCTTCCCTGGTGGGGCTCCGGGAGTGAATTTCAGTATGGGCAGCCTTTCATGGGC-AGGGTGGGATCTC--GGGTTGATCAGAATGAACCACAGTGCTACA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393411 118 - 608964 ---AGGCA-TGAGGGG-CT-GTGGGCTTCTCCCCTGGCAAGGATCTGGGTGTGAGTTTCAGGATGGGCAGCTGT----GAGTGAGGGTATGTTCTCTTGGGTTAATTGTAGTTAACTATAATTTTATA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410458 84 - 98207768 AACAGGAC-AG------CCCCCGGGGATCCTCCCTGGTGGAGCTCTGGG------TTTCAGTGC--------------TGGCAAAGACAGCTCTTTGTGGGCAAGGGAGAC----------------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7398007 121 + 22200726 I e micMur3.chr1 25878132 344 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=368063.000000 s hg38.chr3_KI270779v1_alt 91711 41 + 205312 TGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC s panTro5.chr3 200075783 41 + 202621043 TGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 54977 41 + 190779 TGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20639 41 + 106623 TGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831256 41 + 123690457 TGTGAAGTGCTATTATTGATGATAAAAAGTGTGCAAATGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429456 41 + 204787373 TGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36449 41 + 192460366 TGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512819 41 + 19675229 TGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447722 41 + 16847902 TGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385185 41 - 91754291 TGTGAAGTGCCATCGTTGATGATAAACAGTGTGTGGATGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538558 41 - 1977891 TGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421308 41 + 7796314 TGTGAAGTGCTGTCATTGATGATAAAGAGTGTGCGGATGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900025 37 - 74750902 CATAAAGTGCTATTACTGTTCA----GAGTGTGCAAATAAT i calJac3.chr17 C 0 I 6 s saiBol1.JH378146 431548 39 + 17725628 CGTGAAGGGCTTTTATTGCTCAC--GGAGTGTGCAAATAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393839 38 - 6778120 TGTGAAGTGCTATTATTGTTCAT--AGAGTGTGCAAATAA- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48145 38 - 69927 CGTGAAGGGCTATTACTGTTCAT--AGAGTGTGCAGATAA- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7398128 41 + 22200726 TGTGAAGTGTCATTATTGTTGATAGAGAGTACGCAAATGAC i proCoq1.NW_012133858v1 I 121 C 0 s otoGar3.GL873829 393529 40 - 608964 TGTGAAGTGTCATTATTGTTGATA-AAAGTATGCAAATATT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410542 24 - 98207768 -----------ATTTTTGTTAAT------TGTATTAATGGC i mm10.chr16 C 0 C 0 e micMur3.chr1 25878132 344 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=185.000000 s hg38.chr3_KI270779v1_alt 91752 1 + 205312 -A s panTro5.chr3 200075824 1 + 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55018 1 + 190779 -G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20680 1 + 106623 -G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831297 1 + 123690457 -G i nomLeu3.chr11 C 0 I 116 s rheMac8.chr2 202429497 1 + 204787373 -G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36490 1 + 192460366 -G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512860 1 + 19675229 -G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447763 1 + 16847902 -G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385226 1 - 91754291 -G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538599 1 - 1977891 -G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421349 1 + 7796314 -G i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 431587 1 + 17725628 -G i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7398169 1 + 22200726 -A i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 393569 1 - 608964 -G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410566 1 - 98207768 C- i mm10.chr16 C 0 C 0 e micMur3.chr1 25878132 344 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48183 0 - 69927 C e cebCap1.NW_016107444v1 393877 0 - 6778120 C e calJac3.chr17 900062 6 - 74750902 I a score=6592.000000 s hg38.chr3_KI270779v1_alt 91753 5 + 205312 GTGTG s panTro5.chr3 200075825 5 + 202621043 GTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55019 5 + 190779 GTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20681 5 + 106623 GTGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831414 5 + 123690457 GTGTG i nomLeu3.chr11 I 116 C 0 s calJac3.chr17 900068 5 - 74750902 GTATC i calJac3.chr17 I 6 C 0 s proCoq1.NW_012133858v1 7398170 3 + 22200726 --GTG i proCoq1.NW_012133858v1 C 0 I 230 s otoGar3.GL873829 393570 3 - 608964 --ATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410567 5 - 98207768 GGAGG i mm10.chr16 C 0 C 0 e micMur3.chr1 25878132 344 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48183 0 - 69927 C e cebCap1.NW_016107444v1 393877 0 - 6778120 C e macNem1.NW_012014355v1 512861 0 + 19675229 C e saiBol1.JH378146 431588 0 + 17725628 C e colAng1.NW_012118932v1 421350 0 + 7796314 C e manLeu1.NW_012102020v1 538600 0 - 1977891 C e chlSab2.chr15 385227 0 - 91754291 C e cerAty1.NW_012004056v1 447764 0 + 16847902 C e macFas5.chr2 36491 0 + 192460366 C e rheMac8.chr2 202429498 0 + 204787373 C a score=-4029.000000 s hg38.chr3_KI270779v1_alt 91758 45 + 205312 AGTG------TAAGCGTGC---ATGGCGCTGCAGTACACACTAATCAACCATGA s panTro5.chr3 200075830 49 + 202621043 AGTGAGT--GTAAGCGTGC---ATGGCACTGCAGTACACACTAATCAACCATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55024 49 + 190779 AGTGAGT--GTAAGCGTGC---ATGGCACTGCAGTACACACTAATCAACCATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20686 45 + 106623 AGTG------TAAGCATGC---CTGGCGCTGCAGTACACACTAATCAACCATGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831419 45 + 123690457 AGCG------TAAGCGTGC---CTGGCGCTGCAGTACACACTAATCAACCATGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 900073 45 - 74750902 AGTG------TAAGCGTGC---ATGGCGCCGCAGCACACACAAATAAACCGTGA i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 431588 5 + 17725628 -------------GTGTG------------------------------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393877 3 - 6778120 -----------------------TGG---------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48183 3 - 69927 -----------------------TGG---------------------------- i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65410572 25 - 98207768 ----AATAGACGAGTGTGCTGGCTGGCAG------------------------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7398173 230 + 22200726 I e micMur3.chr1 25878132 344 - 114275543 I e otoGar3.GL873829 393573 0 - 608964 C e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e macNem1.NW_012014355v1 512861 0 + 19675229 C e colAng1.NW_012118932v1 421350 0 + 7796314 C e manLeu1.NW_012102020v1 538600 0 - 1977891 C e chlSab2.chr15 385227 0 - 91754291 C e cerAty1.NW_012004056v1 447764 0 + 16847902 C e macFas5.chr2 36491 0 + 192460366 C e rheMac8.chr2 202429498 0 + 204787373 C a score=736370.000000 s hg38.chr3_KI270779v1_alt 91803 138 + 205312 CGATGTGTGTGAGTGTAAGCGTGCCTGGCGCTGCAGTACACGCTAATCAACCATGACGCTGCCATCGTAA-GGGATGGCTGAGAGTTTGTCTTTATGAACGTGGGACAGTAAGTGGGGCACGGAGC--GGGGGTGCAGGGA s panTro5.chr3 200075879 138 + 202621043 CGGTGTGTGTGAGTGTAAGCATGCCTGGCGCTGCAGTACACACTAATCAACCATGACGCTGCCATCGTAA-GGGGTGGCTGAGAGTTTGTCTTTATGAACGTGGGACAGTAAGTGGAGCACGGAGC--GGGGGTGCAGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55073 139 + 190779 CGGTGTGAGTGAGTGTAAGCGTGCCTGGCGCTGCAGTACACACTAATCAACCATGACGCTGCCATCGTAAGGGGGTGGCTGAGAGTTTGTCTTTATGAACGTGGGACAGTAAGTGGAGCATGGAGC--GGGGGTGCAGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20731 140 + 106623 CGGTGTGTGTGAGTGTAAGCATGCCTGGCGCTGCAGTACACACTAATCAACCATGACGCTGCCATCGTAA-GGGGTGGCTGAGAGTTTGTCTTTATGAACGTGGGACAGTAAGTGGGGCATGGAGCGTGGGGTTGCAGGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831464 138 + 123690457 CGGTGTGTGTGAGCGTAAGGGTGCCTGGCGCTGCAGTACACACTAATCAACCATGACGCTGCCATCGTAA-GGGGTGGCTGAGAGTTTGTCCTTATGAACGTGGGAGAGTAAGTGGGGCACAGAGC--CGGGGTGCAGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429498 104 + 204787373 ----GTGTGTGAGTGTAAGCCTGCCTGG----------------------------CGCTGCCATGGTGA-GAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGTGGGGAG---GTGGGTGCAGGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36491 104 + 192460366 ----GTGTGTGAGTGTAAGCCTGCCTGG----------------------------CGCTGCCATGGTGA-GAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGTGGGGAG---GTGGGTGCAGGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512861 104 + 19675229 ----GTGTGTGAGTGTAAGCCTGCCTGG----------------------------CGCTGCCATGGTGA-GAGGTGGCTGAGAGTCTGCCTTTAAGAACGT-GGAGAGTGAGTGGGGCGGGGAG---GTGGGTGCAGGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447764 104 + 16847902 ----GTGTGTGAGTGTAAGCCTGCCTGG----------------------------TACTGCCATGGTGA-GAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGCGGGGAG---GCGGGTGCAGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385227 104 - 91754291 ----GTGTGTCAGTGTAAGCCTGCCTGG----------------------------CGCTGCCATGGTGA-GAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGCGGGGAG---GTGGGTGCAGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538600 104 - 1977891 ----GTGTGTGAGTGTAAGCCTGCCTGG----------------------------CGCTGCCATGGTGA-GAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGCGGGGAG---GTGGGTGCAGGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421350 106 + 7796314 --GTGTGTGTGAGTATAAGCCTGCATGG----------------------------CGCCGCCATGGTAA-GAGGTGGCTGAGAGTCTGTCTTTATGAACGT-GGAGAGTGAGTGGGGCGGGGAG---GTGGGTGCAGGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900062 113 - 74750902 TGGTTTGTATCAGTGTAAGCGTGCATGGCGCCGCAGCACACACAAATAAACCGTGACGCTGCCATTGCAC-G----------GGGTTGCTGTT--AGAATGTG-------------GGCGAGGAAG--CGGGGTGCAGGGA i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 431593 118 + 17725628 -------TGTCAGTGTAAGCGTGCAGGGCACTGCAGTACACGCAGATAAACCGCGGCACCGCCACTGT--------------GAGCTCGTGTTTGTGAATGTGGGAGGGCAGGTCTGGCGGGGAAG--CGGGGTGCAGGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 393880 135 - 6778120 ---TGTGTGTCAGTGTAAGCGTGCACGGCGCTGCAGTACACACAACTAAACCGTGGCTCTGCCATTGCAC-GGGGTCGCTGTGAGTTTGTGTTTATGAATGTGGGAGAGTAAGTGCGGCCAGGAAG--CGGGGTGCAGGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48186 135 - 69927 ---TTTGTGTCAGTGTAAGCGCGCACGGCGCTGCAGTACACGCGAGCGAACCGTGGTGCTGCCATTGCAC-GGGGTCGCTGTGAGCTTGTGTTTATGAATGTGGGAGGGTAGGTGTGGCGGGGAAG--CGGGGTGCGGGGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 393573 109 - 608964 ---TGTGTGTCAGTTTAAGCATGCAGGACACTGAAGTACACACAAACGAACAATGATGTTGTCATCGCTC-T----------GAGTTTGCCTTTACG------------TAATTGGGGTTGGGAA---GGG---GCAGGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410597 105 - 98207768 ----ATGGGTCAGCTTACACATG-GTGGCCCTGT----------------------GGCCATCACTGTAA-G-GGAGTCTGGGAGTCACTCTTTAGTCATG--GGATAGTGGGGTGG--AGGGAG---GAGGGGCTTGGGA i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7398173 230 + 22200726 I e micMur3.chr1 25878132 344 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=1197225.000000 s hg38.chr3_KI270779v1_alt 91941 100 + 205312 GGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCCAGTTTATTACCTAGCATGGATTTCCTTCAAAAT s panTro5.chr3 200076017 100 + 202621043 GGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCCAGTTTATTACCTAGCATGGATTTCCTTCAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55212 100 + 190779 GGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCCAGTTTATTACCTAGCATGGATTTCCTTCAAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20871 100 + 106623 GGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCTAAGTTTATTACCTAGCATGGATTTCCTTCAAAAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831602 100 + 123690457 GGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCAAGTGTATTACCTAGCATGGATTTCCTTCAAAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429602 100 + 204787373 GGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36595 100 + 192460366 GGTGCCAGCTGGCAATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 512965 100 + 19675229 GGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTTGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447868 100 + 16847902 GGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385331 100 - 91754291 GGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTTGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538704 100 - 1977891 GGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421456 97 + 7796314 GGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGA---CTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900175 100 - 74750902 GGGGCCGGCTGGTCATCATTTTGCAGACAGCTGAAGAATGCGGCTTAACAACATTCTAACTCCTCGAAGTTTATTACCTGGCATGGATCTCCTTCAAAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431711 100 + 17725628 GGGGCCGGCTGGCGATCATTTTGCAGAAAGCTGAAGAATGCGGCTTAACAAGATTCTGACTTCTGTAAGTTTATTCCCTAGCATGGATCTCCTTCACAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394015 99 - 6778120 GGGGCCGGCGGGTGATCATTTTGCAGAAACCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCTAAG-GTATTACCTAGCATGGATCTCCTTCAAAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48321 100 - 69927 GGGGCCGGCTGGTGGTCATTTTGCAGAAGGCTGAAGAATGCAGCTTAACAGGATTCTGACGCCTCTAAGTTTATTACCCGGCATGGATCTCCTTCAAAAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25878476 97 - 114275543 GGTGTCAGCTGGTGATAATTCTG-CTGAAGCTGAAGAAGGTAGCTTAACAAGATAGTGACTCCTCTGAGTTTATTACCTAGCAC--ATCTCCTTCAAAGT i micMur3.chr1 I 344 C 0 s otoGar3.GL873829 393682 100 - 608964 AGTGTCAGCTGGTGATAATTCTGCCTAAAGCTGAAGAATGTGGCTTAACAAGATTCTGAGTCCTCTGAGTTTAGTACCTAGAGTGGATTTTCTTCAAAGT i otoGar3.GL873829 C 0 I 320 s mm10.chr16 65410702 71 - 98207768 GATGCCAGCTGGTGATCATTTTA-----------------------------GCTCTGCTCCCTCCAACATCGTTACCTAGCCCAGCTGTTCTTTGAAAT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7398173 230 + 22200726 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=265643.000000 s hg38.chr3_KI270779v1_alt 92041 31 + 205312 ACAGATT--TCGTGTGAAAA------------GTCCAACTGCCAC s panTro5.chr3 200076117 31 + 202621043 ACAGATT--TCGTGTGAAAA------------GTCCAACTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55312 31 + 190779 ACAGATT--TCGTGTGAAAA------------GTCCAACTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 20971 31 + 106623 ACAGATT--TCGTGTGAAAA------------GTCCAACTGCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831702 31 + 123690457 ACAGATT--TCGTGTGAAAA------------GTCCAACTGCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429702 31 + 204787373 ACAGATT--CCGAGTGAAAA------------GTCCGACTACCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36695 31 + 192460366 ACAGATT--CCGAGTGAAAA------------GTCCGACTACCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513065 31 + 19675229 ACAGATT--CCGAGTGAAAA------------GTCCAACTACCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447968 31 + 16847902 ACAGATT--CCGAGTGAAAA------------GTCCGACTACCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385431 31 - 91754291 ACAGATT--CCGAGTGAAAA------------GTCCGACTACCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538804 31 - 1977891 ACAGATT--CCGAGTGAAAA------------GTCCGACTACCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421553 31 + 7796314 ACAGATA--TGGAGTGAAAA------------GTCCGACTACCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900275 31 - 74750902 ACAGATT--TCGTGCGAAAA------------GGTCGACTGTCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431811 31 + 17725628 ACAGATT--TCGTGTGAAGA------------GGTCGGCTGTCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394114 31 - 6778120 ACAGATT--TCGTGTGAAAA------------GGTCGACCGTCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48421 43 - 69927 ACAGAGT--TCGTGTGAAAAGGTTAGGGTTAGGGTCGACTGTCAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25878573 16 - 114275543 ACAGC----TTGTGTGAGAA------------------------- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 394102 29 - 608964 ACAGTCTCACTATGTGAACA------------GT----CTCTCAC i otoGar3.GL873829 I 320 C 0 s mm10.chr16 65410773 27 - 98207768 TTGCCTT--TTGAATGAAAA------------GT----TTGTCAC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7398173 230 + 22200726 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=231762.000000 s hg38.chr3_KI270779v1_alt 92072 14 + 205312 AAACTGCTTGGGAA s panTro5.chr3 200076148 14 + 202621043 AAACTGCTTGGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55343 14 + 190779 AAACTGCTTGGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21002 14 + 106623 AAACTGCTTGGGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120831733 14 + 123690457 AAACTGCTTGGGAA i nomLeu3.chr11 C 0 T 90437 s rheMac8.chr2 202429733 14 + 204787373 AAACTGCTTGGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36726 14 + 192460366 AAACTGCTTGGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513096 14 + 19675229 AAACTGCTTGGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 447999 14 + 16847902 AAACTGCTTGGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385462 14 - 91754291 AAACTTCTTGGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538835 14 - 1977891 AAACTGCTTGGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421584 14 + 7796314 AAACTGCTTGGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900306 14 - 74750902 AGACTGCTGGGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 431842 14 + 17725628 AAACTGCTTTGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394145 14 - 6778120 AAACTGCTTGGGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 48464 14 - 69927 AAACTGCTTGGGAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25878589 14 - 114275543 AAACTGCTTGGGAA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7398403 14 + 22200726 AAACTGCTTGGGAA i proCoq1.NW_012133858v1 I 230 C 0 s otoGar3.GL873829 394131 14 - 608964 AAACTGCTTGGGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410800 14 - 98207768 AAACTGCTTGGGCG i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=1228990.000000 s hg38.chr3_KI270779v1_alt 92086 93 + 205312 GGGTGGATGCTG--ACAGGCAGGGCTTTTGTGAAAGACGGGAATGAACCCTGACCTGTCGCTAATAGGAGTTGTGCCAAACTCATCACATACA---TT s panTro5.chr3 200076162 93 + 202621043 GGGTGGATGCTG--ACAGGCAGGGCTTTTGTGAAAGACGGGAATGAACCCTGACCTGTCGCTAATAGGAGTTGTGCCAAACTCATCACATACA---TT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55357 93 + 190779 GGGTGGATGCTG--ACAGGCAGGGCTTTTGTGAAAGACGGGAATGAACCCTGACCTGTCGCTAATAGGAGTTGTGCCAAACTCATCACACACA---TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21016 93 + 106623 GGGTGGATGCTA--AGAGGCAGGGCTTTTGTGAAAGATGGGAATGAACCCTGACCTGTCACTAATAGGAGTTGTGCCAAACTCATCACATACA---tt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741310 93 + 123690457 GAGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGACGGGAACGAACCCTGACCTGTCGTTAATAGGAGTTGTGCCAAACTCATCACATACA---TT i nomLeu3.chr11 T 90437 C 0 s rheMac8.chr2 202429747 93 + 204787373 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGATGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACA---TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36740 93 + 192460366 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGATGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACA---TT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513110 93 + 19675229 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGACGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACG---TT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448013 93 + 16847902 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGACGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCGCATACA---TT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385476 93 - 91754291 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGACGGGAACGAACCCTGACCTGTCGCTAATAGGAGCTGTGCCAAACTCATCACATACG---TT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538849 93 - 1977891 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAAGACGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACA---TT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421598 93 + 7796314 GGGTGGATGCTG--AGAGGCAGGGCTTTTGTGAAGGACGGGAACGAACCCTGACCTGTCGCTAATAGGAGTTGTGCCAAACTCATCACATACA---TT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900320 90 - 74750902 GGGTGAATGCTG--AGAGGCAGGGCTTCTGAGAAAGACGGGAACTAACACTGATCTGTGACTGATA---CTTGTGTCAAACTAATCACATACA---TT i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 431856 90 + 17725628 GGGTGGGTGCTG--AGAGGCAGGGCTTTTGAGAAAGACAGGAACTAGCATTGATCTGTCACTAATA---GTTGTGCCAAACTAATCACATACA---TT i saiBol1.JH378146 C 0 I 103 s cebCap1.NW_016107444v1 394159 89 - 6778120 GGGTGGATGCTG--AGAGGCAGGGCTTTTGAGAAAGACGGGAACTAACACTGATCTGTCACTAATA----TTGTGCCAAACTAATCACATACA---TT i cebCap1.NW_016107444v1 C 0 I 28 s aotNan1.NW_018503669v1 48478 90 - 69927 GCGTGGATGCTG--AGAGGCAGGGCTTTTGAGAAAGACGGGAACTAACATTGATCTGTCGCTAATA---GTTGTGCCAAACTAATCACATACA---TT i aotNan1.NW_018503669v1 C 0 I 28 s micMur3.chr1 25878603 95 - 114275543 GGGTGGATGCTGAGAGAGGCAGGACTTTTATGAAAAAAGAGAACAGACACTGATCTGTCGCTAGTAGGAACTGTGCCAAACTTGTCACATACA---TT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7398417 95 + 22200726 GGGTGGATGCTGAGAGAGGCAGGACTTTTATAAAAGAAGAGAACAAACGCTGATCTGTCGCTAGTAGGAACTGTGCCAAACTTGTCACATACA---TT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 394145 95 - 608964 GGGTGGACACTGAAAGAGGCAGGGCTTTTATGAAAA---AGAGCAAACACTGTTCTGTCAGTAGTAGGCACTGGGCCAAACTTGTCACAAGTAttttt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410814 93 - 98207768 -GGGAGATTCTGAGAGAGGCA-GACTTTTCTGAAAGATGGGAGCTAACCGTGATCTGTTACTAACTGGCACTGTGCCAAACCTATCACACACA---CT i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I a score=29603.000000 s hg38.chr3_KI270779v1_alt 92179 4 + 205312 --AAAA s panTro5.chr3 200076255 4 + 202621043 --AAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 55450 4 + 190779 --GAAA i panPan2.chrUn_NW_014024201v1 C 0 M 864 s gorGor5.CYUI01000576v1 21109 4 + 106623 --ttaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741403 4 + 123690457 --AAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429840 4 + 204787373 --AAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36833 4 + 192460366 --AAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513203 4 + 19675229 --AAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448106 4 + 16847902 --AAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385569 4 - 91754291 --AAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538942 4 - 1977891 --AAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421691 4 + 7796314 --AAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900414 4 - 74750902 --AAAA i calJac3.chr17 I 4 C 0 s micMur3.chr1 25878698 4 - 114275543 --AAAA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7398512 4 + 22200726 --AAAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 394240 4 - 608964 --aaaa i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410907 4 - 98207768 TTAA-- i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e saiBol1.JH378146 431946 103 + 17725628 I a score=9555.000000 s hg38.chr3_KI270779v1_alt 92183 1 + 205312 A s panTro5.chr3 200076259 1 + 202621043 A i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120741407 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429844 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 36837 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513207 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448110 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385573 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538946 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421695 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900418 1 - 74750902 A i calJac3.chr17 C 0 C 0 s micMur3.chr1 25878702 1 - 114275543 A i micMur3.chr1 C 0 I 668 s proCoq1.NW_012133858v1 7398516 1 + 22200726 A i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 394244 1 - 608964 a i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410911 1 - 98207768 a i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e saiBol1.JH378146 431946 103 + 17725628 I e gorGor5.CYUI01000576v1 21113 0 + 106623 C a score=4638.000000 s hg38.chr3_KI270779v1_alt 92184 1 + 205312 A s panTro5.chr3 200076260 1 + 202621043 A i panTro5.chr3 C 0 C 0 s nomLeu3.chr11 120741408 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202429845 1 + 204787373 A i rheMac8.chr2 C 0 I 353 s macNem1.NW_012014355v1 513208 1 + 19675229 A i macNem1.NW_012014355v1 C 0 I 83 s cerAty1.NW_012004056v1 448111 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 I 58 s chlSab2.chr15 385574 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538947 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421696 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900419 1 - 74750902 A i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 7398517 1 + 22200726 A i proCoq1.NW_012133858v1 C 0 I 665 s otoGar3.GL873829 394245 1 - 608964 a i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410912 1 - 98207768 a i mm10.chr16 C 0 C 0 e micMur3.chr1 25878703 668 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e saiBol1.JH378146 431946 103 + 17725628 I e macFas5.chr2 36838 0 + 192460366 C e gorGor5.CYUI01000576v1 21113 0 + 106623 C a score=1749.000000 s hg38.chr3_KI270779v1_alt 92185 3 + 205312 TAG s panTro5.chr3 200076261 3 + 202621043 TAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21113 1 + 106623 --a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741409 3 + 123690457 TAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36838 2 + 192460366 -AG i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 421697 1 + 7796314 --G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900420 3 - 74750902 GAG i calJac3.chr17 C 0 I 93 s otoGar3.GL873829 394246 3 - 608964 cag i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65410913 3 - 98207768 tag i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e macNem1.NW_012014355v1 513209 83 + 19675229 I e saiBol1.JH378146 431946 103 + 17725628 I e manLeu1.NW_012102020v1 538948 0 - 1977891 C e chlSab2.chr15 385575 0 - 91754291 C e cerAty1.NW_012004056v1 448112 58 + 16847902 I e rheMac8.chr2 202429846 353 + 204787373 I a score=2422.000000 s hg38.chr3_KI270779v1_alt 92188 4 + 205312 AAAA s panTro5.chr3 200076264 4 + 202621043 AAAA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21114 4 + 106623 aaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741412 4 + 123690457 AAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36840 4 + 192460366 GGGG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 385575 4 - 91754291 GGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538948 4 - 1977891 GGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421698 4 + 7796314 GGGG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 394249 4 - 608964 atga i otoGar3.GL873829 C 0 I 367 s mm10.chr16 65410916 4 - 98207768 ataa i mm10.chr16 C 0 I 1607 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e macNem1.NW_012014355v1 513209 83 + 19675229 I e calJac3.chr17 900423 93 - 74750902 I e saiBol1.JH378146 431946 103 + 17725628 I e cerAty1.NW_012004056v1 448112 58 + 16847902 I e rheMac8.chr2 202429846 353 + 204787373 I a score=22276.000000 s hg38.chr3_KI270779v1_alt 92192 14 + 205312 GGA------TTTATTTTTTT s panTro5.chr3 200076268 14 + 202621043 TGA------TTTATTTattt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21118 14 + 106623 gga------tttatttattt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741416 14 + 123690457 GGA------TTTATTTAttt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36844 14 + 192460366 GGA------TTTGttttatt i macFas5.chr2 C 0 C 0 s chlSab2.chr15 385579 14 - 91754291 GGA------tttattttatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 538952 20 - 1977891 GGGATTTGttttattttatt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421702 14 + 7796314 GGA------tttattttatt i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e macNem1.NW_012014355v1 513209 83 + 19675229 I e calJac3.chr17 900423 93 - 74750902 I e saiBol1.JH378146 431946 103 + 17725628 I e cerAty1.NW_012004056v1 448112 58 + 16847902 I e rheMac8.chr2 202429846 353 + 204787373 I a score=3556.000000 s hg38.chr3_KI270779v1_alt 92206 2 + 205312 TT s panTro5.chr3 200076282 2 + 202621043 tt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21132 2 + 106623 at i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741430 2 + 123690457 at i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36858 2 + 192460366 tt i macFas5.chr2 C 0 I 1239 s macNem1.NW_012014355v1 513292 2 + 19675229 tt i macNem1.NW_012014355v1 I 83 I 5 s chlSab2.chr15 385593 2 - 91754291 tt i chlSab2.chr15 C 0 I 27 s manLeu1.NW_012102020v1 538972 2 - 1977891 tt i manLeu1.NW_012102020v1 C 0 I 37 s colAng1.NW_012118932v1 421716 2 + 7796314 tt i colAng1.NW_012118932v1 C 0 I 24 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e calJac3.chr17 900423 93 - 74750902 I e saiBol1.JH378146 431946 103 + 17725628 I e cerAty1.NW_012004056v1 448112 58 + 16847902 I e rheMac8.chr2 202429846 353 + 204787373 I a score=26441.000000 s hg38.chr3_KI270779v1_alt 92208 14 + 205312 T----------AGTTCTATGCTCC s panTro5.chr3 200076284 24 + 202621043 ttttttagagcagttctatgctcg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21134 22 + 106623 t--tttagagcagttctatgctcg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741432 24 + 123690457 ttgtttagagcagttctaggttca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 513299 14 + 19675229 ----------cagttctaggtttg i macNem1.NW_012014355v1 I 5 C 0 s cerAty1.NW_012004056v1 448170 14 + 16847902 ----------cagttctaggtttg i cerAty1.NW_012004056v1 I 58 C 0 s chlSab2.chr15 385622 14 - 91754291 ----------cagttctaggtttg i chlSab2.chr15 I 27 C 0 s manLeu1.NW_012102020v1 539011 14 - 1977891 ----------CAGTTCTATGTTTG i manLeu1.NW_012102020v1 I 37 C 0 s colAng1.NW_012118932v1 421742 14 + 7796314 ----------cagttctaggtttg i colAng1.NW_012118932v1 I 24 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e calJac3.chr17 900423 93 - 74750902 I e saiBol1.JH378146 431946 103 + 17725628 I e macFas5.chr2 36860 1239 + 192460366 I e rheMac8.chr2 202429846 353 + 204787373 I a score=68802.000000 s hg38.chr3_KI270779v1_alt 92222 17 + 205312 CTCTAAACCTCGAGTGG s panTro5.chr3 200076308 17 + 202621043 ctctaaacctcgagtgg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21156 17 + 106623 ctctaaacctcgagtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741456 17 + 123690457 ctctaaacctcgagtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430199 17 + 204787373 ctctaaaccttgagtgg i rheMac8.chr2 I 353 C 0 s macNem1.NW_012014355v1 513313 17 + 19675229 ctctaaaccttgagtgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448184 17 + 16847902 ctctaaaccttgagtgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385636 17 - 91754291 ctctaaaccttgagtgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539025 17 - 1977891 CTCTAAACCTTGAGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421756 17 + 7796314 ctctaaactttgagtgg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e calJac3.chr17 900423 93 - 74750902 I e saiBol1.JH378146 431946 103 + 17725628 I e macFas5.chr2 36860 1239 + 192460366 I a score=-610.000000 s hg38.chr3_KI270779v1_alt 92239 3 + 205312 ---AG-A s panTro5.chr3 200076325 3 + 202621043 ---ag-a i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21173 3 + 106623 ---ag-a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741473 3 + 123690457 ---ag-a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430216 4 + 204787373 ---agca i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 513330 3 + 19675229 ---ag-a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448201 3 + 16847902 ---ag-a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385653 3 - 91754291 ---ag-a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539042 3 - 1977891 ---AG-A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421773 3 + 7796314 ---ag-a i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 432049 3 + 17725628 TTT---- i saiBol1.JH378146 I 103 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e calJac3.chr17 900423 93 - 74750902 I e macFas5.chr2 36860 1239 + 192460366 I a score=97568.000000 s hg38.chr3_KI270779v1_alt 92242 23 + 205312 ggccgggcgtggtggctcacacc s panTro5.chr3 200076328 23 + 202621043 ggccgggcacggtggctcacacc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 21176 23 + 106623 ggccgggcacggtggctcacacc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741476 23 + 123690457 ggctgggtgcagtggctcacacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430220 23 + 204787373 ggccgggtgcagtggctcacacc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 513333 23 + 19675229 ggccgggtgcagtggctcacacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448204 23 + 16847902 ggccgggtgcagtggctcacacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385656 23 - 91754291 ggccaggtgcagtggctcacacc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539045 23 - 1977891 GGCCTGTAATCACAgctcacacc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421776 23 + 7796314 ggccgggtgcgatggctcacacc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900516 23 - 74750902 ggtcaggggcagaggctaacgct i calJac3.chr17 I 93 C 0 s saiBol1.JH378146 432052 23 + 17725628 ggtcaggggcagaggctaacgct i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e panPan2.chrUn_NW_014024201v1 55454 864 + 190779 M e macFas5.chr2 36860 1239 + 192460366 I a score=251287.000000 s hg38.chr3_KI270779v1_alt 92265 43 + 205312 tgt-aatcccagcatttt--gggaggctgaggtgggtggatcacct s panTro5.chr3 200076351 43 + 202621043 tgt-aatcccagcatttt--gggaggccgaggtgggcggatcacct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 56318 43 + 190779 tgt-aatcccagcatttt--gggaggccgaggtgggcggatcacct i panPan2.chrUn_NW_014024201v1 M 864 C 0 s gorGor5.CYUI01000576v1 21199 43 + 106623 tgt-aatcccagcatttt--gggaggccgaggtgggcggatcacct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741499 43 + 123690457 tgt-aatcccagcatttt--gggaggctgaggcgggcggatcacct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430243 46 + 204787373 tgtaaatcccagcattttgaggagggccaaggcgggcagatcaccc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 513356 43 + 19675229 tgt-aatcccagcatttt--gggaggccaaggcgggtgaatcacct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448227 38 + 16847902 tgt-a-----agcatttt--gggaggccaaggcgggcggatcacct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385679 43 - 91754291 tgt-aatcccagcatttt--gggaggccaaggcgggtggatcacct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539068 43 - 1977891 tgt-aatcccagcatttt--gggaggccaaggcgggcggatcacct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421799 43 + 7796314 tgt-aatcccagcatttt--gggaggccgaggcaggtggatcacct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900539 43 - 74750902 tgt-aatcccagcacttt--tagaggccggggcatgtggatcacct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432075 43 + 17725628 tgt-aatcccagcacctt--tggaggctggggcatgtggatcacct i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e macFas5.chr2 36860 1239 + 192460366 I a score=1492869.000000 s hg38.chr3_KI270779v1_alt 92308 227 + 205312 gaggtcaggagttcgagaccagcctgaccaacatggagaaa-ccccgtctctactaaaaatac-aaaattagccgggggtggtagcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgcagtgagctgagatcgcacccttgcgctctggc--------ctgggcaacaaaagtgaaactatgtttc----------aaaaaaaaaaa s panTro5.chr3 200076394 224 + 202621043 gaggtcaggagttcgagaccagcctgaccaacatggagaaa-ccccgtctctactaaaaatat-aaaattagccgggggtggtagcaggtgcctgtaatcccacctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgcagtgagctgagatcgcaccattgcactctggc--------ctgggcaacaagagtgaaactatgtttc-------------aaaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 56361 223 + 190779 gaggtcaggagttcgagaccagcctgaccaacatggagaaa-ccctgtctctactaaaaatat-aaaattagccgggggtggtagcaggtgcctgtaatcccacctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgcagtgagctgagatcgcaccattgcactctggc--------ctgggcaacaagagtgaaactatgtttc--------------aaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21242 227 + 106623 gaggttgggagttcgagaccagccttaccaacatggagaaacccccgtctctactaaaaatac-aaaattagctgggggtggtagcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgcagtgagctgagatctcaccattgcactctggc--------cccggcaacaaaagtgaaactctatttc-----------aaaaaaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741542 228 + 123690457 gaggtcgggagttggagaccagcctgaccaacatggagaaa-ccccgtctctactaaaaatac-aaaattagccgggtgtggtagcaggtgcctgtaatcccagctacttgggaggctgacgcaagagaattgcttgaacctgggaggtgggggttgcagtgagctgagatcttgccattgcactctggc--------ctgggcaacaaaagtgaaactctgtttc---------aaaaaaaaaaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430289 236 + 204787373 gaggtcaggagtttgagaccagcctgaccaacatggagaaa-ccccgtctctactaaaagtac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagcgagccaagatcacgccactgcactccagc--------ctgggcaac-agagtgaaactgtttaaaaaaaaaaacaaaaaaacaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38099 236 + 192460366 gaggtcaggagtttgagaccagcctgaccaacatggagaaa-ccccgtccctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttggagcgagccaagatcacgccactgcactccagc--------ctgggcaac-agagtgaaactgtttaaaaaaaaaaacaaaaaaacaaaa i macFas5.chr2 I 1239 C 0 s macNem1.NW_012014355v1 513399 235 + 19675229 gaggtcaggagtttgagaccagcctgaccaacatggagaaa-ccccgtccctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagcgagccaagatcacgccactgcactccagc--------ctgggcaac-agagtgaaactgttt-aaaaaaaaaacaaaaaaacaaaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448265 229 + 16847902 gaggtcaggagtttgagaccagcctgaccttcatggagaaa-ccccgtccctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgcactctagc--------ctgggcaac-agagtgaaactgttttaaaa-------aaaaaaaaaaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385722 234 - 91754291 gaggtcaggagtttgagaccagcctgaccaacatggagaaa-ccccgtctctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggtaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgcactccagcccactgcactgggcaac-agagtgaaactgttt----------aaaaaaaaaaaaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539111 236 - 1977891 gaggtcaggagtttgagaccagcctgaccaacatggagaaa-ccccgtccctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgcactgtaac--------ctgggcaac-agagtgaaactgttttttttaaaaaaaaaaaaaaaaaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 421842 224 + 7796314 gaggtcaggagtttgagaccagcctgaccaacatggagaaa-ccccatctctactaaaaatac-aaaattagtgggatgtggtggcgggcgcctgtaatcccagctactcaggaggctgaagcaggagaattgcttgaacctgggaggtggagtttgcagtgagccaagatcacgccactgcactccagc--------ctgggcaac-agcgtgaaactgttt------------aaaaaaaaaaaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900582 228 - 74750902 gaggtctggaattcgagaccagcctgaccaacccggtgaaa-ccccatctgtactaaaaatgcaaaaattagccggccatggtggcgcgtgcctgtaatgccagctacttgggaggctgaggcgggagaatcacctgaacccaggaggtggaggttgcggtgagccgtgattgcgtcactgcactccagc--------ctgctcaaaaagaatgaaacttcatctc---------aaaaaaataaa- i calJac3.chr17 C 0 I 22 s saiBol1.JH378146 432118 228 + 17725628 gaggtctggagttcgagaccagtctgaccagcatggtgaaa-ccccgtctctactgcaaatgcaaaaattagctgggcgtggtggcgtatgcctgtaatgccagcgacttgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcggtgagtcaagattgcgccactgcactccagc--------ctgggcaaaaagagtgacacttcatctt---------gaaaaaataaa- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I a score=6006.000000 s hg38.chr3_KI270779v1_alt 92535 1 + 205312 a s panTro5.chr3 200076618 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 56584 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21469 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741770 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430525 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38335 1 + 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513634 1 + 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448494 1 + 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385956 1 - 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539347 1 - 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 432346 1 + 17725628 a i saiBol1.JH378146 C 0 I 6 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e colAng1.NW_012118932v1 422066 0 + 7796314 C a score=665184.000000 s hg38.chr3_KI270779v1_alt 92536 127 + 205312 GCTGCAGTGGAGAGTCTGGAGTTcccatccccaccactcacagcctcccccatcatcagcgtcccccaccagagtggcacatttgataggactgaggaacctactttgatgcatcattatcatacaT s panTro5.chr3 200076619 127 + 202621043 gctgcagtggagagtctggagttcccatccccaccactcacagcctcccccatcatcagcatcccccaccagagtggcacatttgttaggactgaggaacctactttgacccatcattatcatacaT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 56585 127 + 190779 GCTGCAGTGGAGAGTCTGGAGTTcccatccccaccactcacagcctcccccatcatcagcatcccccaccagagtggcacatttgttaggactgaggaacctacgttgacccatcattatcatacaT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21470 124 + 106623 gctgcagtggagagtctggagttcccatccccaccactcacagcctcccccatcatcaacgtcccccaccagagcggcacatttgttaggactgaggaacctactttgacgcatcatt---atAcat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741771 127 + 123690457 actggagtggagagtatggagttcccatccccaccactcacagcctcccccatcatcgacgtcccccaccagagtggcacatttgttaggaccgaggaatctactttgacacagcattatcatacaT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430526 127 + 204787373 acttgagcagagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacgtttgttaggactgaggaacctactttgatgcatcattatcaTACAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38336 127 + 192460366 aCttgagcagagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacgtttgttaggactgaggaacctactttgatgcatcattatcaTACAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513635 127 + 19675229 acttgagcagagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacgcttgttaggactgaggaacctacactgatgcatcattatcatacaT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448495 127 + 16847902 acttgagcagagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacatttgttaggactgaggaacctactttgatgcatcattatcatacaT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 385957 123 - 91754291 acttgagcggagagtatcgagttcccatccccaccacgtacagcctctgc---catcgacatcccccaccagagcagcacgtctgttaggactgaggaacctactttgatgcatcattatcGTATA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539348 127 - 1977891 aCttgagcagagtgtagcgagttcccgtccccaccacttacagcctcccccatcatcaacatcccctaccagagtggcatgtttgttaggactgaggaacctactttgatgcatcattatcatacaT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 422066 123 + 7796314 ----gagtggagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacgtttgttaggactgaggaacctactttaatgcatcattatcatacat i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e otoGar3.GL873829 394253 367 - 608964 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=900482.000000 s hg38.chr3_KI270779v1_alt 92663 167 + 205312 tgtatttttaatcctcacaacggccctgcaagatcggccctgtttttaccaccCCCCACCTCCACTGCTTTAAGGGTGAGGCCACTGTGCTTC-TGGGCATCCAGTAACAACTCCTCGGAGCCAGAATCTGACTCCTCACAGGCCTGAGCACTGCACCCCGTGGCCTC s panTro5.chr3 200076746 167 + 202621043 TGTATTtttaattctcacaacggccctgcaagatcggccctgttcttaccaCCCACCACCTCCACTGCTTTAAGGGTGAGGCCACTGTGCTTC-TGGGCATCTAGTAACAACTCCTCGGAGCCAGGATCTGACTCTCCACAGGCCTGAGCACTGCACCCCGTGGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 56712 167 + 190779 TGTATTtttaattctcacaacggccctgcaagatcggccctgttcttaccaCCCACCACCTCCACTGCTTTAAGGGTGAGGCCACTGTGCTTC-TGGGCATCTAGTAACAACTCCTCGGAGCCAGGATCTGACTCCCCACAGGCCTGAGCACTGCACCCCGTGGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21594 167 + 106623 tatatttttaatcctcacaacggccctgcaagatCCGCCCTGTTCTTACCACCCCCCACCTCCACTGCTTTAAGGGTGAGGCCACTGTGCTTC-TGGGCGTCCAGTAACAACTCCTCGGAGCCAGGATCTGACTCCCCACAGGCCTGAGCACTGCACCCCGTGGCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120741898 165 + 123690457 TATATTTTTAACCCTCACAATGGCCCTCCAAGATCCGCCCTGTTCTTACCACCCCCCACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGATCCAGTAAGAACTC--CGGAGCCAGGATCTGACTCCACACAGGCCTGAGAACTGCACTCCGCGGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430653 165 + 204787373 TATATTTTTAACCCTCACAATGGCCCTACAAGAT-GACCCTGCTCTGACCACCCCGGA-CTCCACCGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGACCCAGTGACTCCTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGGACTGCACGCCTCGGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38463 165 + 192460366 TATATTTTTAACCCTCACAATGGCCCTACAAGTT-GACCCTGTTCTGACCACCCCCGA-CTCCACCGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGACCCAGTGACTCCTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACGCCTCGGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513762 165 + 19675229 TATATTTTTAACCCTCACAATGGCCCTACAAGAT-GACCCTGCTCTGACCACCCCGGA-CTCCACCGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGATCCAGTGACTCCTCCTCGGAGCCAGGATCGGACTCCACACAGGCCTGAGCACTGCGCGCCTCGGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448622 166 + 16847902 TATATTTTTAACCCTCACAATGGCCCTACAAGAT-GACCCTGTTCTGACCACCCCCGACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGATCCAGTGACTCCTCCTCAGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACGCCGCGGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 386080 165 - 91754291 -GTATTTTTAACCCTCACAATGGCCCTACAAGAT-GACCCTGTTCTGACCACCCCCGACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGATCCAGTGACGACTCCTCGGAGCCAGGCTCTGACTCCACACAGGCCTGAGCGCTGCACGCCGCGGCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539475 166 - 1977891 TATATTTTTAACCCTCACAATGGCCCTACAAGAT-GACCCTGTTCTGACCACCCCTGACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTC-TGGGGATCCAGTGACTCCTCCTTGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACGCCGCGGCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 422189 166 + 7796314 tatatttttaaccctcacaatggccctacaagat-ggCCCTGTTCTGACCACCCCCGACCTCCACTGCTTTGAGGATGAGGCCACTGTGCTTC-TGGGGATCCAGTGACTCCTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACGGCACGCCGCGGCCGC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 394620 165 - 608964 TGTTTTTTCAATGTTCATGATAGCCCTAGGAGAT-AAGCATAGTCTTACCACCTGC-ACCTCCTGCCCTTTTCAGCTGAGGAGATGGAGCTTTACTGGGATTAAGCAACCCATCC-CGGAGGGAGGATTCAGTGCCATGCATGCCCAACCACAGTACCATACTGCCTC i otoGar3.GL873829 I 367 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e canFam3.chr33 29041967 5697 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=1510548.000000 s hg38.chr3_KI270779v1_alt 92830 261 + 205312 CTGCCTGTGCTCACCGT-GGCCTGGTCTGCGCTGCACGT-------------GTCCCGt-------------------------------------------tagctccaccttacaggtgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcagattctccaactcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACTGAGGGGCTGGGCTGGGATTTGCTGTATTCGAGAAGACCCCCT------------------------------TGGACCCG--------------- s panTro5.chr3 200076913 261 + 202621043 CTGCCCGTGCTCACCAT-GGCCTGGTCTGCGCTGCACGT-------------GTCCCGt-------------------------------------------tagctccaccttacaggtgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcagattctccaactcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACCGAGGGGCTGGGCCGGGATTTGCTGTATTTGAGAAGACCCCCC------------------------------TGGACCCG--------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 56879 261 + 190779 CTGCCCGTGCTCACCAT-GGCCTGGTCTGCGCTGCACGT-------------GTCCCGt-------------------------------------------tagctccaccttacaggtgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcagattctccaactcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACCGAGGGGCTGGGCCGGGATTTGCTGTATTCGAGAAGACCCCCC------------------------------TGGACCCG--------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 21761 261 + 106623 CTGCCTGTGCTCACCGT-GGCCTGGTCTGCGCTGCACGT-------------GTCCCGt-------------------------------------------tagctccaccttacaggtgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcagattctccaactcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACCGAGGGGCTGGGCCGGGATTTGCTGTATTTGAGAAGACCCCCC------------------------------AGGACCGG--------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742063 260 + 123690457 CTGCCTGTGCTCACCGT-GGCCTGGTTTACGCTGCACGT-------------GTCCCGT-------------------------------------------GAGctccaccttacaggtgcag-aatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------ggagagcagattctccagctcagggtcccaagtccacacgctttcctctccacca----GATTTGAAGACTGTACCAGGAGAGCCGCAGTGTTCCGGAGCCACCGAGGGGCTGGGCCGGGCTTTGCCATATTTGAGGAGACCCCCC------------------------------TGGACCCG--------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202430818 255 + 204787373 CTGCCTGTGCTCACCGT-GGCCTGGTG-----TGCACAT-------------GTCCCGt-------------------------------------------tagctccaccttacggatgcagaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcaggttctccaactcagggtccccagtccacctgctttcctctccacca----gattgGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCTCC-------------------------------GGACCCA--------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38628 255 + 192460366 CTGCCTGTGCTCACCGT-GGCCTGGTG-----TGCACAT-------------GTCCCGt-------------------------------------------tagctccaccttacggatgcagaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcaggttctccaactcagggtccccagtccacctgctttcctctccacca----gattgGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCTCC-------------------------------GGACCCA--------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 513927 255 + 19675229 CTGCCTGTGCTCACCGT-GGCCTGGCG-----TGCACAT-------------GTCCCGt-------------------------------------------tagctccaccttacggatgcagaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcaggttctccgactcagggtccccagtccacctgctttcctctccacca----gattgGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCTGGGGTTTGCTGTATTTGAGAAGACCCCCC-------------------------------GGACCCA--------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 448788 255 + 16847902 CTGCCTGTGCTCACCGT-GGCCTGGTG-----TGCACAT-------------GTCCCGt-------------------------------------------tagctccaccttacagatgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcaggttctgcaactcagggtccccagttcacctgctttcctctccacca----gattgGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCCGGGCTTTGCTGTATTTGGGAAGACCCCCC-------------------------------GGACCCA--------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 386245 249 - 91754291 CTGCCTGTGCTCA-------CCTGGTG-----TGCACAC-------------GTCCcgt-------------------------------------------tagctccaccttacagatgcagaaatgcaggcgtggagctgagagacttggccagggtc-acagg--------------ac---------agagagcaggttctccagctcagggtccccagtccacctgctttcctctccacca----gaTTGGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAACTACTGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCCCT-------------------------------GGACCCA--------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539641 255 - 1977891 CTGCCTGTGCTCACCGT-GGCCTGGTG-----TGCACAT-------------GTCCCGt-------------------------------------------tagctccactttacagatgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcaggttctccaactcagggtccccagttcacctgctttcctctccacca----gattAGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAACTACTGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCCCC-------------------------------GGACCCA--------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 422355 225 + 7796314 CTGCCTGTGCTCACCGT-GGCCTTGTTTGTGCTGCACGT-------------GTCCTCt-------------------------------------------tagctccaccttacagatgcggaaatgcaggcttggagctgagagacttggccagggtc-acagg--------------gc---------agagagcaggttctccaactcagggtcccaagtccacctgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCTGCAGTGTTCCAGAGCTACCGAGAGGCTGGGCCG--------------------------------------------------------------------------------- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 394785 311 - 608964 CCACATgtgctcacagtccaccaggtttgtgctgcacat-------------tttccattaaatttaatttaatcctcacaaccccatgatataggtactcctagctccgttttacaggtaagaaaatttaggcttggaactgagaaatttggccagggtctgcaagcagcaaaccgagccgc---------agagaggggact---aaaaccagaatctgaagtccacacactttcttctcc-cca----cactgGAGG--GGAACGGACACAGCTGCAGTGTCCCAGGGCTGTAGAGGTG---------ACTTTGCTCTATTTGAGGAGACTCCTGGCAG------------------------GCAGGAGCCT--------------- i otoGar3.GL873829 C 0 I 34 s canFam3.chr33 29047664 329 + 31377067 ctgcacgttttacactt-ggattgatttactcttcacatccctgtgaaacaggtgccct-------------------------------------------tagctccattttacagatgagaaagtgcaggctgggagccaggagacctggccagggtg-acatg--------------gttggaaagcaggagagcagggattcagactcaggccccaaagaacacgcaccttcctctctgccaGTGTGATTTGAGGAATAGACCAGGAGAGCTGCCACATTCTAGAGTTGT--GCGGGCTGCG-TGGGCTTTGCTGCGTCTGAGAAGACCCCTGCTGGGTAGGAGACTTGGGTGGGGGGGCTGTGAGACCCCAGGGTGGGGGGGTGA i canFam3.chr33 I 5697 C 0 e proCoq1.NW_012133858v1 7398518 665 + 22200726 I e micMur3.chr1 25878703 668 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=580996.000000 s hg38.chr3_KI270779v1_alt 93091 65 + 205312 AGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AGAAAGGACACCCCGGGGCTCCTGG s panTro5.chr3 200077174 65 + 202621043 AGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AGAAAGGACACCCCGGGGCTCCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57140 65 + 190779 AGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AGAAAGGACACCCCGGGGCTCCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22022 64 + 106623 AGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AG-CAGGACACCCCGGGGCTCCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742323 65 + 123690457 AGAGACTGTGGGCTTGGGGAGCACGAGGAGGTTTCACAGC-AGAAAGGACACCCCGGGGCTCCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431073 65 + 204787373 AAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AAAACTGACACCCCGGGGCTCCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38883 65 + 192460366 AAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AAAACTGACACCCCGGGGCTCCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514182 65 + 19675229 AAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AAAACTGACACCCCGGGGCTCCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449043 65 + 16847902 AAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AAAAATGACACCCCGGGGCTCCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 386494 65 - 91754291 AAAGGCTGTGGGCTTGGGGAGCAGGAGGAGGTTTCACAGC-AAAAATGACACCCCAGGGCTCCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539896 65 - 1977891 AAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTTACAGC-AAAAATGACACCCTGGGGCTCCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 422580 55 + 7796314 ---GGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGC-AAAACTGACACCCCGG-------GG i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 25879371 65 - 114275543 AGAGGCTATGGGCTCGAGGAGCATGAGGAGGTTGCACAGC-AGAAATGACACCCCAGGGCTCCTGG i micMur3.chr1 I 668 I 610 s proCoq1.NW_012133858v1 7399183 65 + 22200726 AGAGGCTATGGGCTTGGGGAGCATGAGGAGGTTGCACAGC-AGAAATGACACCACAGGGCTCCTGG i proCoq1.NW_012133858v1 I 665 C 0 s otoGar3.GL873829 395130 66 - 608964 GGAGGCTACAGGCTTGGGGAGCACGAGGAGGTTTCATAGCAAAAAATGACACTGCAAGGCTCCTGG i otoGar3.GL873829 I 34 C 0 s canFam3.chr33 29047993 63 + 31377067 AGAGGTTAGGGGCT-GGGAGGCATGAGGAGGTTTCACAG--AAGGATGATATTGTGGGGTTCCCGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=71885.000000 s hg38.chr3_KI270779v1_alt 93156 15 + 205312 ATAAGCCAGAAAATG s panTro5.chr3 200077239 11 + 202621043 AT----CGGAAAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57205 11 + 190779 AT----CGGAAAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22086 15 + 106623 ACAAGCCAGAAAATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742388 15 + 123690457 ACAAGCCGGAAAATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431138 15 + 204787373 AGAAGCTGGAAAATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38948 15 + 192460366 AGAAGCTGGAAAATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514247 15 + 19675229 AGAAGCTGGAAAATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449108 15 + 16847902 AAAAGCTGGAAAATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 386559 15 - 91754291 AAAAGCTGGAAAATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539961 15 - 1977891 AAAAGCTGGAAAATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 422635 15 + 7796314 AAAAGCTGGAAAATG i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7399248 15 + 22200726 AAAAGGAAGAAAATG i proCoq1.NW_012133858v1 C 0 I 568 s otoGar3.GL873829 395196 14 - 608964 -AAAAGAAAACAATA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29048056 15 + 31377067 ATAAAGAAGAAAATA i canFam3.chr33 C 0 C 0 e micMur3.chr1 25879436 610 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=3302449.000000 s hg38.chr3_KI270779v1_alt 93171 582 + 205312 TGC------CAGGGGA-------AGTCGGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAAAGAAATGATCTCAGG-CTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGACGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGC---------------------------------CGCACTGGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTATACTGCCTGGG-GGTGCAGCCCGCACTCCTCACTATAGTCAGATCAACTATGCGTGCTTTCCAGTGGCCTGGGAGAGGACTCCAT-AGGGAGGGATGC---------TTA------CCTTGTG----GGCTTTGGAATATaag------ccctttcaccttctccgctggtcctcatcacgttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggcctggctagtaggaggctgagtcaggatttgaaccagcagatcatctgaccccggagccagtCGTGGGCGGCACAGCGGGAGCTGCAACCGAGGC-TCTTGACTCCTGCGTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGTTG s panTro5.chr3 200077250 582 + 202621043 TGC------CAGGGGA-------AATCGGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTAGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGG-CTTGAAGTGGGGAGAACAAACTGTATTATGAAGGCAGACGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGC---------------------------------CGCACCGGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTACACTGCCTTGG-GGTGCAGCCCGCACTCCTCACTATAGTCAGATCGACTATGCGTGCTTTCCAGGGGCCCGGGAGAGGACTCCAT-GGGGAGGGATGC---------TTA------CCTTGTG----GGCTTTGGAATAtaag------ccctttcaccttctccgctggtcctcaccacgttggcaaggcaggtat----tgtgaccctgttttctgaggtgaggacatggaggctgggaggggtc---tagagactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccagagccggtCGTGGGCGGCACAGCGGGAGCTGCAACCGAGGC-TCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57216 581 + 190779 TGC------CAGGGGA-------AGTCGGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTAGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGG-CTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGACGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGC---------------------------------CGCACCGGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTACACTGCCTTGG-GGTGCAGCCCGCACTCCTCACTATAGTCAGATCGACTATGCGTGCTTTCCAGGGGCCCGGGAGAGGACTCCAT-GGGGAGGGATgc---------tta------ccttgtg----ggctttggaatataag------ccctttcaccttctccgctggtcctcaccacgttggcaaggcaggtat----tgtgaccctgttttctgaggtgaggacatggaggctgggaggggtc---tagagactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccggagccggtCGTGGGCGGCACAGCGGGAGCTGCAACCGAGGC-TCTTGACTCCTGCCTCG----TCATTCCC--------GAGGTCCACAGGACAACCAGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22101 582 + 106623 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGG-CTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGACGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGC---------------------------------CGCACCGGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTACACTGCCTGGG-GGTGCAGCCCGCACTCCTCACTATAGTCAGATCAACTATGCGTGCTTTCCAGGGGCCCGGGAGAGGACTCCAT-GGGGAGGGATGC---------TTA------CCTTGTG----GGCTTTGGAATAtaag------ccctttcaccttctccgctggtcctcaccacgttggcaaggcaggaat----tgtgaccctgttttctcaggtgagggcatggaggctgggaggggtc---tagagactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccagagccggtAGTGGGTGGCACAGTGGGAGCTGCAACCGAGGC-TCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742403 583 + 123690457 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGCAGAAACTGTATTATGAAGGCAGACAAACAGTTCCTACAAAAGTGAGATTTGTGTGTGCAGCTGGGC---------------------------------CGCACCGGAGCAGCGATGAGAGCAGGCGCCCAGGACTCGCCGACACTGCCTGGG-GGTGCAGCCCGCACTCCTCACTATGGTCAAATCCACTGTGTGTGCTTTCCAGTGGCCCGGGAGAGGACTCCATGGGGGAGGGATGC---------TCA------CCTTGTG----GGCTTTGGAATAtaag------ccctttcaccttctccact-gtcctcaccaccttggcaaggcagctat----tgtgaccctgttttctcaggtgaggacgtggaggctgggaggggtc---tggatactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccagagccggtAGTGGGCGGCACAGCAGGAGCTGCAGCCGAGGC-TCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAAGCAGCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431153 558 + 204787373 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGCAAA-GTGAGATTTGTGTGTGCAGCTGGGC---------------------------------TGCAATGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGG-GGTGCAGCCCGTACTCCTCACTATAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGGGGAGGGATgc---------tta------ccttgtg----ggctttggaatataagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggccgggctagtaggaggccgag--------------------tcatccggccccagagccagCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA---------GCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAGCCAGC-G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 38963 558 + 192460366 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGCAAA-GTGAGATTTGTGTGTGCAGCTGGGC---------------------------------TGCAATGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGG-GGTGCAGCCCATACTCCTCACTATAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGGGGAGGGATgc---------tta------ccttgtg----ggctttggaatataagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggccgggctagtaggaggccgag--------------------tcatccggccccagagccagCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA---------GCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAGCCAGC-G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514262 558 + 19675229 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGCAAA-GTGAGATTTGTGTGTGCAGCTGGGC---------------------------------TGCAATGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGG-GGTGCAGCCCGTACTCCTCACTGTAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGGGGAGGGATgc---------tta------ccttgtg----ggctttggaatataagggttttccctttcactttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgagcctgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggccgggctagtaggaggccgag--------------------tcagCCGGCCCCAGAGCCAGCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA---------GCTGCCTTG----TCATTCCCT-------GAGGTCCACAGGACAGCCAGC-G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449123 558 + 16847902 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGATGAACAGTTCCTGCAAA-GTGAGATTTGTGTGTGCAGCTGGGC---------------------------------TGCAATGGACCAGTGGTGACAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGG-GGTGCAGCCCGTACTCCTCACTAGAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGCGGGGGGATgc---------tta------ccttgtg----ggctttggaatataagggttttccctttcatcttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccccgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggccgggctagtaggaggccgag--------------------tcgtccggccccagAGCCAGCAGTGGGCGGCACAGCGGCAGCTGCAACCAAGGA---------GCTGCTTCG----CCATTCCCT-------GAGGTCCACAGGACAGCCAGC-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 386574 559 - 91754291 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGCAAA-GTGAGATTTGTGTGTGCAGCTGGGC---------------------------------TGCACGGGACCAGTGGTGACAGCGGGTGCCCAGGACTCGTC-ACACTGCCTGGG-GGTGCAGCCCGTACTCCTCACTATAGTCACATCGACTGTGCGTGCTTTCAGGTGGCTGGGGAGAGGACTCCATGGCGGAGGGATGC---------TTA------CCTTGTG----GGCTTTGGAATATaagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacacggaggctgggaggggtc---tagagactggccgggctagtaggaggccgag--------------------tcaTCCGGCCCCAGAGCCAGCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA---------CCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGC-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 539976 558 - 1977891 TGC------CAGGGGA-------AGTCAGG-----CTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGATGAACAGTTCCTGCAAA-GTGAGATTTGTGTGTGCAGCTGGGC---------------------------------TGCAATGGACCAGTGGTGGCAGCGGGTGCCCAGGACTTGCC--CGCTGCCTGGG-GGTGCAGCCCGTACTCCTCACTAGAGTCACATCGACTGTGCGTGCATTCAGGTGGCCGGGGAGAGGACTCTATGGCGGGGGGATgc---------tta------ccttgtg----ggctttggaatataagggttttccctttcactttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggccgggctagtaggaggccgag--------------------tcgtccggccccagAGCCAGCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA---------GCTGCCTCG----TCATTCCCT-------GAGGTCCACGGGACAGCCAGT-G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 422650 565 + 7796314 TGC------CAGGGGA-------AGTCAGG-----CTCCGAGGGCACCACTCT--GGGCTGCTAGCTGTGTGGGCTG-----------------------------------GACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAAC--TATTATGAAGGCAGATGAACAGTTCCTGCAAAGGTGAGGTTTGTGTGTGCAGCTGGGC---------------------------------TGCAGTGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC-GCGCTGCCTGGG-GGTGCGGCCCGTACTCCTCACTACAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGGGGAGGGATgc---------tta------ccttgtg----ggctttggaagataagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtga-cctgttttctcaggtgaggacatggaggctgggaggggtc---tagagactggccgggctagtaggaggccaag--------------------tcatccagccccagAGCCAGTAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGC-TCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGC-C i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 395211 649 - 608964 TGCATCATTCAAGAGA-------GGTCGGGGCAGACTCTGAGAG--ACTGTGT--GGGTTTCAGGCTCTGTGGGCTGAGGCGCAAAAGCTCTGCTTTCACTCTGTGGGGACAGACCAAGAAGGGTCAGAAA---GGACTCAGGTCTTGAAGTGGGGAGAAGGAAGAGTATTCTGAAGGAGCCTG---AGATCCTATGAAAGC---ATGTGTGTGTGCGCGCGCGCACGCGCGTGTGCATGcacacacacacacacacacacCCCGGATGAGGAATGGGTGTGTATGCCCACATCCCACCTACAGTGCATGGGTGGAGCAGCTTACAATTCTCACTGCAGTAAAATAGCCAA---GTGACTTTAAGGGGTTCCTTGGCGGGT------GGGGTGGGGTACACTCCTtaataa------cctcttggcatgcctttggaatataagagctctcccattcacattttcctttgg-ccttaccacttt-----ggtgggtat----tgtgaccctgttttctcaggtgaggacatggaagctgggagacgcctagtagtggctggcctggctagtaggaggcagag-gaggatttgaaccaataggtcatctgtcgccagagcTGGGGGTGGGCAGCA-----------GAATCAGAGGCCTCGTGACTCCTGCTCTT----CCATTCAGC-------AGGGTCCACAGGAGGATGAGCTG i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29048071 562 + 31377067 ------CTTCAGGGGAGGTGGGTGGTCAGA-----CCCCAAGAATACCTCTGTTGGGGCCTTAGCTTGTGTGGGCTGACACAGAAAGGCTTTGATTCCACCGGGTGGG----GATTGAGGAAGCTCAGAGAAATGG-CTTGGGCTTTGAAGTGGGGAGAAGGAAGTATAT--------------------TCCCGTAGAAGCACGATT--CGTGAACAGCTGAGG---------------------------------AG------------GGTGAAGG-------CCGTGACTCACCTGATACGCATGTG-GGGCCAGCCTGACCTTCTGAAGGT--------------TGTGTGCTGTCAATGCCTCTTTGAGAGGACACGGCTGGGGAGGGGTGC---------TTAGTGGCCCCTTGCA----GGCTTTGGAATATAAG-ACTTTCCCGTTCCCCTTCCCCTCAGGCCCTCACCAC---GGCAAGGCAGGTCTGGTAGGTAACCCTGGTTCACGAG----------GGCGGCCCGGAGGGGCC---T------------GGCCGGTAGGACGCGGAGTCAGGATTTGAGCCAG----TCATTGGACTCcagagc---tagttggcaacaggcctagggccggagcccagtc-tttcgcttcctggtccagtgctctttcactgcTCAGGGAGAGACATGGGAGGACAAACTG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7399263 568 + 22200726 I e micMur3.chr1 25879436 610 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=7085.000000 s hg38.chr3_KI270779v1_alt 93753 1 + 205312 G s panTro5.chr3 200077832 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57797 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22683 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742986 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431711 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 39521 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514820 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449681 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387133 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 540534 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423215 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7399831 1 + 22200726 G i proCoq1.NW_012133858v1 I 568 C 0 s otoGar3.GL873829 395860 1 - 608964 A i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29048633 1 + 31377067 A i canFam3.chr33 C 0 C 0 e micMur3.chr1 25879436 610 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=24000.000000 s hg38.chr3_KI270779v1_alt 93754 2 + 205312 GG s panTro5.chr3 200077833 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57798 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22684 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742987 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431712 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 39522 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514821 2 + 19675229 GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449682 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387134 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 540535 2 - 1977891 GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423216 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 25880046 2 - 114275543 GG i micMur3.chr1 I 610 C 0 s proCoq1.NW_012133858v1 7399832 2 + 22200726 GG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 395861 2 - 608964 GG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29048634 2 + 31377067 GG i canFam3.chr33 C 0 C 0 e mm10.chr16 65410920 1607 - 98207768 I e dasNov3.JH569502 3862774 8458 + 6579706 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=856252.000000 s hg38.chr3_KI270779v1_alt 93756 100 + 205312 ACCTGGGGCCCCATCCTGATGCCCT-GGGGAGA------GGTG------CTAGGCCCCTTT-TGGGTCTATGGGCTACTTTTGGGCCAGTGGAGCTGGGTAAAGACCATCTCAA s panTro5.chr3 200077835 100 + 202621043 ACCTGGGGCCCCATCCTGACATCCT-GGGGAGA------GGTG------CTAGGCCTCTTT-TGGGTCTATGGGCTACTTTTGGGCCAGTGGAGCTGGGTAAAGACCATCTCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57800 101 + 190779 ACCTGGGGCCCCATCCTGACGTCCTGGGGGAGA------GGTG------CTAGGCCTCTTT-TGGGTCTATGGGCTACTTTTGGGCCAGTGGAGCTGGGTAAAGACCATCTCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22686 100 + 106623 ACCTGGGGCCCCATCCTGACGCCCT-GGGGAGA------GGTG------CTAGGCCTCTTT-TGGGTCTATGGGCTACTTTTGGACCAGTGGAGCCAGGTAAAGACCATCTCAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120742989 100 + 123690457 ACCTGGGGCCCCATCCTGACGCCCT-GGGGAGA------GGTG------CTAGGCCTCTTT-TGGATCTATGGGCTACTTTTGGACCAGTGGAGCCGGGTAAAGACCATCTCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431714 101 + 204787373 ACCTGGGGCCCCGTCCTGATGCCCT-GGGGAGA------GGTT------CTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 39524 101 + 192460366 ACCTGAGGCCCCGTCCTGATGCCCT-GGGGAGA------GGTT------CTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514823 101 + 19675229 ACCTGGGGCCCCGTCCTGATGCCCT-GGGGAGA------GGTT------CTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449684 101 + 16847902 ACCTGGGGCCCCATCCTGACGCCCT-GGGGAGA------GGTT------CTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACCATCTCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387136 101 - 91754291 ACCTGGGGCCCCATCCTGACGCCCT-GGGGAGA------GGTT------CTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACCATCTCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 540537 101 - 1977891 ACCTGGGGCCCCATCCTGACGCCCT-GGGGAGA------GATT------CTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423218 101 + 7796314 ACCTGGGGCCCCATCCTGATGCCCT-GGGGAGA------GGTT------CTAGGCCTCCTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTCAAGACTATCTCAA i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 25880048 100 - 114275543 ACCTGGGGGCCCATCCTGACACCTT-GGGGAGA------GGTC------CTGCACCTGTTT-GGGGTCTGCGGGCTACTTTGGAGCCAGTGCTTCTCAGTAAAGACCATCTCAA i micMur3.chr1 C 0 I 827 s proCoq1.NW_012133858v1 7399834 100 + 22200726 ACCTGGGGGTCCATCCTGACACCCT-GGGGAGA------GGTC------CTGCACCTGTTT-GGGGTCTGTGGGCTACTTTGGAgccagtgcatctcagtaaagaccatctgaa i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 395863 94 - 608964 ACT--GGGGTCCATCCTGACACTCT-GGGGC----------TC------CTGACCCTAATT-GGGGTCTGTGGGCTACTTTGGAGATGGCGGAGCTCAGTAGAGACCATCTCAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29048636 100 + 31377067 ACCTGGGGC-----CCTGACAGGTA-GAGGTGACCACATGGTC------TCGTACTTCCGT-TGGGTCCTTGGG-TACTTTGGGGCCAGTAGACCTCAGTAACGACCATCTCAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871232 100 + 6579706 accttgagccccat------gtcct-ggaactg------ggtttcttggcaactccacttt-tgggtcctgaggctacttttggattaatgaatctcagaaaagaccatctcga i dasNov3.JH569502 I 8458 C 0 e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=28138.000000 s hg38.chr3_KI270779v1_alt 93856 3 + 205312 ACC s panTro5.chr3 200077935 3 + 202621043 ACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57901 3 + 190779 ACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22786 3 + 106623 ACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743089 3 + 123690457 ACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431815 3 + 204787373 ACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 39625 3 + 192460366 ACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 514924 3 + 19675229 ACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 449785 3 + 16847902 GCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387237 3 - 91754291 ACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 540638 3 - 1977891 GCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423319 3 + 7796314 ACC i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7399934 3 + 22200726 acc i proCoq1.NW_012133858v1 C 0 I 606 s otoGar3.GL873829 395957 3 - 608964 AGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29048736 3 + 31377067 ACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871332 3 + 6579706 acc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=1040994.000000 s hg38.chr3_KI270779v1_alt 93859 181 + 205312 CTGTGCCAGGGGAGGTCAGACTCCAAGAGCGCCACC-TTTGGGCTTCCAGCTGTGTAGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-T-TTGATCCTTTTCCTTCCAAGACtgggattaccagataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt s panTro5.chr3 200077938 181 + 202621043 CTGTGCCAGGGGAGGTCAGACTCCAAGAGCGCCACC-TTTGGGCTTCCAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-T-TTGATCCTTTTCCTTCCAAGACtgggattaccagataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 57904 180 + 190779 GTGTGCCAGGGGAGGTCAGACTCCAAGAGCGCCACC-TTTGGGCTTCCAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-T-TTGATCC-TTTCCTTCCAAGACtgggattaccagataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22789 182 + 106623 CTGTGCCAGGGGAGGTCAGACTCCAAGAGCGCCACC-TTCGGGCTTCCAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCAAGACtgggattaccagataaa--acacagggcatccagttacatttgaatttcaggtaacaatttttttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743092 182 + 123690457 GTGTGCCAGGAGAGGTCAGACTCCAAGAGCTCCACC-TTCGGGCTTCCAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-T-TTGATCCTTTTCCTTCCAAGACtgggattaccagataaa--atacagggcatccagttacatttgaatttcaggtaacaatttctttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202431818 182 + 204787373 ATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACC-TTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCACGACtgggattactacataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt i rheMac8.chr2 C 0 I 10 s macFas5.chr2 39628 182 + 192460366 ATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACC-TTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCACGACtgggattactacataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt i macFas5.chr2 C 0 I 10 s macNem1.NW_012014355v1 514927 183 + 19675229 ATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACC-TTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCACGACtgggattactacataaa--acacagggcatccagttacatttgaatttcaggtaacaatttttttt i macNem1.NW_012014355v1 C 0 I 10 s cerAty1.NW_012004056v1 449788 182 + 16847902 ATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACC-TTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCTACGACtgggattactacataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt i cerAty1.NW_012004056v1 C 0 I 6 s chlSab2.chr15 387240 182 - 91754291 ATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACC-TTTGTGCTCCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCACGACtgggattactacgtaaa--acacagggaatccagttacatttgaatttcaggtaacaa-ttttttt i chlSab2.chr15 C 0 I 6 s manLeu1.NW_012102020v1 540641 182 - 1977891 ATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACC-TTTGGGCTTCTAGCTGTGTGGCCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCACGACtgggattactacataaa--acacagggcatccagttacatttgaatttcaggtaacaa-ttttttt i manLeu1.NW_012102020v1 C 0 I 6 s colAng1.NW_012118932v1 423322 185 + 7796314 ATGTGCCGGGGGAGGTCAGGCTCCAAGAGTGCCACCTTTTGGGCTTCTAGCTGTGTGGGCTGGACCCAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-T-TTGATCCTTTTCCTTCCAAGAGtgggattactacataaaacacacagggcatcccgtcacatttgaatttcaggcaacaa-ttttttt i colAng1.NW_012118932v1 C 0 I 8 s otoGar3.GL873829 395960 100 - 608964 --------------ATCAGAATGCCAAAATGGTGAC-TC---------------------------------------------------GTTT----T-TTGATCCTTTTCCTTCTAAGAGTAGGGTTACCa----------------catccagttgaatttgaatttcaggtaatga-atttttt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29048739 114 + 31377067 ----------------------------------------------------------ATTGGAAC-------CCCAAAA-----GGAGGGTTTATATT-TTGATTCTTTTCCTTCCAAGAGGAAGGTTCCTGGATAAA--ACCTGGGACATCCACTTACATTTGAAtttttaaaaatat-tttattt i canFam3.chr33 C 0 I 238 s dasNov3.JH569502 3871335 94 + 6579706 ---------------------------------------------------------------atcagaaacccccaaaa------gagaggtcata-tcttgatccccttcctcccaagagTAGGGT---------AA--ATACAGGATGCCCAGTTAC--TAGAATTTTAGGAaa----------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=1300961.000000 s hg38.chr3_KI270779v1_alt 94040 220 + 205312 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcgtttatctgaaatgcaagttcaaatttaaccgagtacc-ctg-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CCACTCAC-AGGGAGAGCCCGATC-----------------------------TCCCT---CTAGAC-------A-GGGGAGG-----CCCCCTTTCTCAGGCCAGAAAAGATcttg s panTro5.chr3 200078119 251 + 202621043 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcgtttatcagaaatgcaa-ttcaaatttaacagaataccgctgttatttttatttgctaa--ttag-aaccctCTCA---AAGAGGCTCCTTTGGCTCCACTCACTAGGGAGAGGCAGATCATAAAGGGTAAAGACTATTGAGTCTTTCACCCTC---CTAGAC-------AGGGGGAGG-----CCCCCTTTCTCAGCCCAGAAAAGATcttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58084 220 + 190779 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcgtttatctgaaatgcaagttcaaatttaaccgagtacc-ctg-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CCACTCAC-AGGGAGAGCCCGATC-----------------------------TCCCT---CTGGAC-------A-GGGGAGG-----CCCCCTTTCTCAGGCCAGAAAAGATcttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 22971 220 + 106623 taagtgtaagtacgtagccaatattgcatgagaaatactcatgctaaaaagttattca---------tcgtttatctgaaatgcaagttcaaatttaaccgagtgcc-ctg-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CCACTCAC-AGGGAGAGCCCGATC-----------------------------TCCCT---CTAGAC-------A-GGGGAGG-----CCCCCTTTCTCAGGCCAGAAAAGATcttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743274 219 + 123690457 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcatttatctgaaatgcaagttcaaatttaaccgagtacc-ctg-tatttttatttgctaaatctagaaactctCTCC---AAGAGGCTCC-TTGGC-CTACTCAC-AGGGAGAGCCCCATC-----------------------------TCCCT---CTAGAC-------A-GGGGAGG------CCCCTTTCTCAGGCCAGAAAAGATCTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432010 227 + 204787373 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtacc-cta-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CCACTCCC-AGGGAGAGCCCGATC-----------------------------TCCCT---GCAGGC-------A-GGAGAGG---CCCCCCCTTTCTCAGGCCAGAAAAGATCTTG i rheMac8.chr2 I 10 C 0 s macFas5.chr2 39820 227 + 192460366 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtacc-cta-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CCACTCCC-AGGGAGAGCCCGATC-----------------------------TCCCT---GCAGGC-------A-GGAGAGG---CCCCCCCTTCCTCAGGCCAGAAAAGATCTTG i macFas5.chr2 I 10 C 0 s macNem1.NW_012014355v1 515120 228 + 19675229 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtacc-cta-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGG--CCACTCTC-AGGGAGAGCCCCATC-----------------------------TCCCT---GCAGAC-------A-GGAGAGGCA-CCCCCCCTTTCTCAGGCCAGAAAAGATCTTG i macNem1.NW_012014355v1 I 10 C 0 s cerAty1.NW_012004056v1 449976 229 + 16847902 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtacc-cta-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-GTGGC-CCACTCCC-AGGGAGAGCCCGATC-----------------------------TCCCT---GTAGAC-------A-GGAGAGGCA-CCCCCCCTTTCTCAGGCCAGAAAAGATCTTG i cerAty1.NW_012004056v1 I 6 C 0 s chlSab2.chr15 387428 228 - 91754291 ttagtgtaagtatgtaaccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtacc-cta-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CTACTCAC-A-GGAGAGCCCGATC-----------------------------TCCCT---CTAGAC-------A-GGAGAGGCA-CCCCCCCTTTCTCAGGCCAGAAAAGATCTTG i chlSab2.chr15 I 6 C 0 s manLeu1.NW_012102020v1 540829 229 - 1977891 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtacc-cta-tatttttatttgctaaatctagaaaccctCTCC---AAGAGGCTCC-TTGGC-CCACTCCC-AGGGAGAGCCCGATC-----------------------------TCCCT---CTAGAC-------A-GGAGAGGCA-CCCCCCCTTTCTCAGGCCAGAAAAGATCTTG i manLeu1.NW_012102020v1 I 6 C 0 s colAng1.NW_012118932v1 423515 224 + 7796314 ttagtgtaagtatgtagcccatattgcatgagaaatactcatgctaaaaagttactca---------tcatttatctgaaatgcaagttcaaatttaactgagtacc-ctg-tatttttatttgtcaaatctagaagccctCTTC---AAGAGGCTCC-TTGGC-CTCCTCAC-A-GGGGAGCCCGATC-----------------------------TCTCT---CTAGAC-------A-GGAGAGGCATCCCCCTCTTTCTCAGGCCAGAAAAGATCTTG i colAng1.NW_012118932v1 I 8 C 0 s otoGar3.GL873829 396060 217 - 608964 taaat----gtatgtctcaaatattgcatgagaaatattcataatgaaaaattattca---------ttgtttatctgaaaggtaaattcaaatttaactgggtgtc-ctg-tacttttacttgctacatcagacaaccctCCTCCCTAAGAGGCTCC-TTGGC-CTACTCAC-AGAGAGAGCCCTACC-----------------------------ACCCT---ATAGAA-------A---AGAAG-----CACCCTCTGTCAGGCCATAAAAGATCTGG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3871429 204 + 6579706 --------------------acaatgaacggaacatacttaccctaaaaaattattca---------ttgattatctgaaa------ttcaacgttaactggatatt-ctg-tattttcatctgataaatctatcagctttGTGc---aaaagactcc-ttggc-ccacttac-agagtggcttccctc-----------------------------tccctctactaggcctgtctta-ggagaag-----ctccctttgtcaggctattaaggattctg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29048853 238 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=505368.000000 s hg38.chr3_KI270779v1_alt 94260 102 + 205312 tagtaaactactcaagaggctgagg-caggaggatcgcttgagcc--cagg-aattcaagacctgcctgggcaacagagcaagaccctgt-ctctagggaagataTC s panTro5.chr3 200078370 105 + 202621043 tagtaacctactcaagaggctgaggacaggaggatcggttgagccggcaggaaattcaagacctgcctgggca--agagcaagaccctgtcctctgggaaaaaTATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58304 102 + 190779 tagtaaactactcaagaggctgagg-cagaaggatcgcttgagcc--cagg-aattcaagacctgcctgggcaacagagcaagaccctgt-ctctggggaaaaTATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23191 102 + 106623 tagtaaactactcaagaggctgagg-caggaggatcgcttgagcc--cagg-aattcaagacctgcctgggcaacagagcaagaccctgt-ctctggggaagataTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743493 102 + 123690457 TAGTGAACTACGCAAgaggctgagg-caggagggtcgcttcagcc--cagg-aattcaaggcctgcctgggcaacagagcaagaccctgt-ctctggggaaaGTATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432237 102 + 204787373 CAGTAaactactccagaggctgggg-caggaggatcacttgagcc--cagg-aattcaagacctgcctgggcaacaaagcaagatcctgt-ctctggggaaaaTATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40047 102 + 192460366 CAGTAaactactccagaggctgggg-caggaggatcacttgagcc--cagg-aattcaagacctgcctgggcaacaaagcaagatcctgt-ctctggggaaaaTATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515348 102 + 19675229 CAGTAaactactcaagaggctgggg-caggaggatcacttgagcc--cagg-aattcaagacctgcctgggcaacaaagcaagatcctgt-ctctggggaaaaTATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450205 101 + 16847902 CAGTAaactactcaagaggctgggg-caggaggatcacttgagcc--cagg-aattcgagacctgcctgggcaacaaagcaagatcctgt-ctct-gggaaaaTATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387656 102 - 91754291 CAGTAaactactcaacaggctgggg-caggaggatcacttgagcc--cagg-aattcaagacctgcctgggcaacagagcaagatcctgt-cactggggaaaaTATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541058 102 - 1977891 CAGTAaactactcaagaggctgggg-caggaggatcacttgagcc--cagg-aattcaagacctgcctgggcaacaaagcaagatcctgt-ctctggggaaaaTATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423739 102 + 7796314 CAGTGAACCACTCAAgaggctgagg-caggaggaccacttgagcc--cagg-aattcaagacctgcctgggcaacagagtgagatcctgt-ctctggggaaaataTC i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3871633 25 + 6579706 -----------------------------------------------------ctataacctccccctgggtaatgaa----------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e otoGar3.GL873829 396277 0 - 608964 C e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29048853 238 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=142728.000000 s hg38.chr3_KI270779v1_alt 94362 36 + 205312 CTACCGTAGCCTCCCT--CGGGG--ACTCCCATTCCTCCC s panTro5.chr3 200078475 35 + 202621043 CTACCG-AGCCTCCCTCACAAGG--A-TCCCATTCCT-CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58406 36 + 190779 CTACCGTAGCCTCCCT--CGGGG--ACTCCCATTCCTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23293 35 + 106623 C-ACCGTAGCCTCCCT--CGGGG--CCTCCCATTCCTCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743595 35 + 123690457 CTACCGTAGCCTCCCT--CGGGG--C-CCCCATTCCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432339 35 + 204787373 CTACCGTGGCCTCCCT--CGGGG--C-CCCCGTTCCTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40149 35 + 192460366 CTACCGTGGCCTCCCT--CGGGG--C-CCCCGTTCCTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515450 35 + 19675229 CTACCGTGGCCTCCCT--CGGGG--C-CCCCGTTCCTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450306 35 + 16847902 CTACTGTGGCCTCCCT--CGGGG--C-CCCCGTTCCTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387758 37 - 91754291 CTACTGTGGCCTCCCT--CGGGGCCC-CCCCGTTCCTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541160 35 - 1977891 CTACCGTGGCCTCCCT--CGGGG--C-CCCCGTTCCTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423841 36 + 7796314 CTGCCTCAGCCTCCCT--CGGGG-CC-CCCCATTCCTCCC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 396277 29 - 608964 CTATTG------CCTT--CAGGG--C-CCTCCACACACCC i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 3871658 17 + 6579706 ----------tgccca--ctggt--c-ctcta-------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29048853 238 + 31377067 I e aotNan1.NW_018503669v1 48568 28 - 69927 I e cebCap1.NW_016107444v1 394248 28 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=274812.000000 s hg38.chr3_KI270779v1_alt 94398 35 + 205312 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC s panTro5.chr3 200078510 37 + 202621043 ACCTCAG-GGCCCAGTCAAGGCAAACAGGCCTCTGCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58442 35 + 190779 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23328 35 + 106623 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743630 35 + 123690457 TCCTCAG-GG-CCAGGCAAGG-GAGCAGCCCTCTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432374 35 + 204787373 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40184 35 + 192460366 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515485 35 + 19675229 ACCTCAG-GG-CCAGTCAAGG-GAGCAGGCCTCTGCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450341 35 + 16847902 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387795 35 - 91754291 ACCTCCG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541195 35 - 1977891 ACCTCAG-GG-CCAGTCAAGG-GAATAGGCCTCTGCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423877 35 + 7796314 ACCTCAG-GG-CCAGTCAAGG-GAACAGGCCTCTGCTC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 394276 35 - 6778120 ACCTGAG-GG-CCAGTTAAGG-GGACAGGCCTCTGTTC i cebCap1.NW_016107444v1 I 28 C 0 s aotNan1.NW_018503669v1 48596 35 - 69927 ACCTCAG-GG-CCAGTTAAGG-GAACAGGCCTCTGCTC i aotNan1.NW_018503669v1 I 28 C 0 s otoGar3.GL873829 396307 28 - 608964 GCCTCAGCGG-CCAGTCCAAT-GAGCAGGC-------- i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3871675 30 + 6579706 ctcacac-aa-ctaagCAGAG-AAGT-----TCTGCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29048853 238 + 31377067 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=166478.000000 s hg38.chr3_KI270779v1_alt 94433 21 + 205312 TGGGC-AG-AA-GTGCTG-GCAGCC s panTro5.chr3 200078547 23 + 202621043 TAGGCAAG-AATGTGCCG-GCAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58477 21 + 190779 TAGGC-AG-AA-GTGCCG-GCAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23363 21 + 106623 CAGGC-AG-AA-GTGCCG-GCAGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743665 21 + 123690457 TAGGC-AG-AA-GTGCCA-GCAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432409 21 + 204787373 TAGGC-AG-AA-GTGCCA-GCAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40219 21 + 192460366 TAGGC-AG-AA-GTGCCA-GCAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515520 21 + 19675229 TAGGC-AG-AA-GTGCCA-GCAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450376 21 + 16847902 TAGGC-AG-AA-GTGCCA-GCAGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387830 20 - 91754291 TAGGC-AG-AA-GTGCCA--CAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541230 21 - 1977891 TAGGC-AG-AA-GTGCCA-GCAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423912 21 + 7796314 TAGGC-AG-AA-GTGGCA-GCAGCC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 394311 21 - 6778120 TAGGC-AG-AA-GTGCCA-GCAGCC i cebCap1.NW_016107444v1 C 0 I 407 s aotNan1.NW_018503669v1 48631 21 - 69927 TAGGC-AG-AA-GTGCCA-GCAGCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 396335 11 - 608964 ---GT-GG-GG---------CAGCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29049091 23 + 31377067 TGGGC-AGCGA-GTGCCACCCAGCC i canFam3.chr33 I 238 I 2 s dasNov3.JH569502 3871705 21 + 6579706 TATGG-AG-AA-GTTCTA-GCAGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=52696.000000 s hg38.chr3_KI270779v1_alt 94454 6 + 205312 GCTCTC s panTro5.chr3 200078570 6 + 202621043 GCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58498 6 + 190779 GCTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23384 6 + 106623 GCTCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743686 6 + 123690457 GCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432430 6 + 204787373 GCTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40240 6 + 192460366 GCTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515541 6 + 19675229 GCTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450397 6 + 16847902 GCTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387850 6 - 91754291 GCTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541251 6 - 1977891 GCTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423933 6 + 7796314 GCTCTC i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018503669v1 48652 6 - 69927 CCTTTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 396346 6 - 608964 TCTCTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29049116 6 + 31377067 GCACTC i canFam3.chr33 I 2 I 1 s dasNov3.JH569502 3871726 6 + 6579706 CCTCGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e cebCap1.NW_016107444v1 394332 407 - 6778120 I e calJac3.chr17 900810 22 - 74750902 I e saiBol1.JH378146 432347 6 + 17725628 I a score=32680.000000 s hg38.chr3_KI270779v1_alt 94460 5 + 205312 -TGA-AA s panTro5.chr3 200078576 6 + 202621043 -TGACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58504 5 + 190779 -TGA-AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23390 5 + 106623 -TGA-AA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743692 5 + 123690457 -TGG-AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432436 5 + 204787373 -TGA-AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40246 5 + 192460366 -TGA-AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515547 5 + 19675229 -TGA-AA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450403 5 + 16847902 -TGA-AA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387856 5 - 91754291 -TGA-AA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541257 5 - 1977891 -TGA-AA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 423939 5 + 7796314 -TGA-AA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900832 5 - 74750902 -TGA-AA i calJac3.chr17 I 22 C 0 s saiBol1.JH378146 432353 5 + 17725628 -tga-aa i saiBol1.JH378146 I 6 C 0 s aotNan1.NW_018503669v1 48658 5 - 69927 -TGA-AA i aotNan1.NW_018503669v1 C 0 I 395 s otoGar3.GL873829 396352 3 - 608964 ---A-AA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29049123 4 + 31377067 -TAC-A- i canFam3.chr33 I 1 I 3 s dasNov3.JH569502 3871732 6 + 6579706 TAGA-AA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e cebCap1.NW_016107444v1 394332 407 - 6778120 I a score=649536.000000 s hg38.chr3_KI270779v1_alt 94465 96 + 205312 AGCTAGGTGTTGC--------CTCAGG-GTCTCCCG-------GTGTCCTGTGGAAAATGCCTGGC-CACG-GTTTCCATGGTTCCCAGGCTCCAACCCTGCAGTTCTCAGCC-C s panTro5.chr3 200078582 94 + 202621043 AGCTGGTTTTTGC--------CTCAGCTGGCACCCG-------GTGTCCTGTGGAAAATGCCTGGC-CACG-GTTTCCATGGTT-CCAGGCTCCAA-CCTGCAGTTTCCAG-C-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58509 97 + 190779 AGCTAGGTGTTGC--------CTCAGCTGGCTCCCG-------GTGTCCTGTGGAAAATGCCTGGC-CACG-GTTTCCATGGTTCCCAGGCTCCAACCCTGCAGTTCTCAGCC-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23395 97 + 106623 AGCTAGGTGTTGC--------CTCAGCTGGCTCCCG-------GTGTCCCGTGGAAAATGCCTGGC-CACG-GTTTCTATGGTTCCCAGGCTCCAACCCTGCAGTTCTCAGCC-C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743697 97 + 123690457 AGCTAGGTTTTTC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTGTGGTTCCCAGGCTCCAACCCTGCAGTCCTCAGCC-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432441 96 + 204787373 GGCTAGGTTTTGC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAGCC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40251 96 + 192460366 GGCTAGGTTTTGC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAGCC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515552 96 + 19675229 GGCTAGGTTTTGC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAGCC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450408 96 + 16847902 GGCTAGGTTTTGC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAGCC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387861 96 - 91754291 GGCTAGGTTTTAC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACT-GTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAGCC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 541262 96 - 1977891 GGCTAGGTTTTGC--------CTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAGCC-- i manLeu1.NW_012102020v1 C 0 I 830 s colAng1.NW_012118932v1 423944 97 + 7796314 GGCTAGGTTTTGT--------CTGAGCTGGCTGCCT-------GTGTCCTGTGGAAAATGCCTGGC-CACA-GTTTCTATGGTTCCTGGGCTCCAACCCTGCAGTTCTCAGCTC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900837 94 - 74750902 AGTTAGGTTTTGC--------CTGAGCTGGCTCCGT-------GTGTCATGTGGGAAATGCCTGGC-CA---GTTTCTGTGGCTCTCCTGCTCCCGCCCTGTGGTTCTTGGCC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432358 77 + 17725628 aGTTAGGTTTTGC--------CTGAGCTGGCCCC---------GTGTCGTGTGGGAAATGCCTGGC-CA---GTTTCTGTGGTTCTC---------------GGCCCTCGGCC-- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 396355 96 - 608964 TGTTAGGTTTTGT--------CTCATCTGGCTCC-T-------GTTACATGTGGAGGGTGCCTGGT-CCCTCGTTTCTGTGGTCCCAGGTTTCCATCCCTGTGGCTCTTAGAC-- i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29049130 87 + 31377067 TCCAAGGGTCTGTCAAGTGGACAGGGCTGCGTCCCTCGGCTCCGTTACCCGTGGCACGTGGCTGGG-CCCT-GTTCCTGCGGCCCTGGG-------------------------- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3871738 90 + 6579706 GGTTAAGTGTTTC--------CTCATCTGGATCCCTG------GTACATTGTTTTTGTAGCCTGGTACATT-GTTTCTGTAGCTCTGCGGTTCCTTCCCAG--GCCC-------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 48663 395 - 69927 I e cebCap1.NW_016107444v1 394332 407 - 6778120 I a score=78615.000000 s hg38.chr3_KI270779v1_alt 94561 14 + 205312 TCAT-TCAGGAGGGG s panTro5.chr3 200078676 15 + 202621043 TCATCTCAGGAGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58606 14 + 190779 TCAT-TCAGGAGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23492 14 + 106623 TCAT-TCAGGAGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743794 14 + 123690457 TCAT-TCAGGAGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432537 14 + 204787373 TCAT-TCAGGAGGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40347 14 + 192460366 TCAT-TCAGGAGGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515648 14 + 19675229 TCAT-TCAGGAGGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450504 14 + 16847902 TCAT-TCAGGAGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387957 14 - 91754291 TCAT-TCAGGAGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542188 14 - 1977891 TCAT-TCAGGAGGGG i manLeu1.NW_012102020v1 I 830 C 0 s colAng1.NW_012118932v1 424041 14 + 7796314 TCGT-TCAGGAGGGG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 396453 13 - 608964 ACAG-TCACAGAGG- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 29049217 10 + 31377067 ----GTCGGGCGAG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871828 14 + 6579706 ACAT-TCAGGAGCAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 48663 395 - 69927 I e cebCap1.NW_016107444v1 394332 407 - 6778120 I e calJac3.chr17 900931 0 - 74750902 C e saiBol1.JH378146 432435 0 + 17725628 C a score=488545.000000 s hg38.chr3_KI270779v1_alt 94575 55 + 205312 CCTCGGCAGGGTGGGG-GGTGC-CGTCTTTCCCTTGCTGGAGCCCC---AAGGACTCTGC s panTro5.chr3 200078691 58 + 202621043 GCCTCGCAGGGTGGGG-GTGGC-CCTCTTTCCCTTGCCGGAGCCTCTCATAGGACTCTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58620 54 + 190779 CCTCGGCA-GGTGGGG-GGTGC-CCTCTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23506 55 + 106623 CCTCGGCAGGGTGGGG-GGTGC-CCTCTTTCCCTTGCCGGGGCCCC---AAGGACTCTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743808 55 + 123690457 CCTCGGCAGGGTGGCG-AGCGC-CCTCTTTCCCTTGCCAGAGCCCC---AAGGACTCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432551 53 + 204787373 CCTTGGCAGGGTGGGG---CAC-CCTGTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40361 53 + 192460366 CCTTGGCAGGGTGGGG---CAC-CCTGTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515662 53 + 19675229 CCTTGGCAGGGTGGGG---CAC-CCTGTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450518 53 + 16847902 CCTTGGCAGGGTGGGG---CGC-CCTGTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 387971 53 - 91754291 CCTTGGCAGGGTGGGG---CGC-CCTGTTTCCCTTGCCAGAGCCCC---AAGGACTCTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542202 53 - 1977891 CCTTGGCAGGGTGGGG---CGC-CCTGTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424055 53 + 7796314 CCTTGGCAGGGTGGGG---CAC-CCTGTTTCCCTTGCCGGAGCCCC---AAGGACTCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900931 52 - 74750902 ---CGGCAGGGCGGAG-AGTGC-TCTGATTCACTTGCCGGAGCCTC---AAAGACTCTGC i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 432435 47 + 17725628 --------GGGCGGGG-AGGGC-TCTGCTTCCCTTGCTGGAGCCCC---AAGGACCCTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394739 55 - 6778120 CCTCGGCAGGGCGGGG-AGCGC-TCTGCTTCCCTTGCTGGAGCCCC---AAGGACTCTGT i cebCap1.NW_016107444v1 I 407 C 0 s aotNan1.NW_018503669v1 49058 55 - 69927 CCTCGGCAGGGCGGGG-AGCGC-TCTGTTTCCCTTGCTGGAGCCCG---AAGGACTCTGC i aotNan1.NW_018503669v1 I 395 I 57 s otoGar3.GL873829 396466 56 - 608964 TCTGCACAGGGCTGAGAAGTCT-CTCCTTTCCTTTGTTGGGGCCCC---AAGGCCTCTGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29049227 36 + 31377067 ------CAGCGCTGGG---AAG-CTTGGCCCTTCCCCCAGACTCGC-------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871842 57 + 6579706 GGTGAACAGGGGCGTGTAGTGCTCCTCTTTGCCATGCTAGAGCCCC---AAGGGCTCTGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I a score=60529.000000 s hg38.chr3_KI270779v1_alt 94630 7 + 205312 CGGCTCC- s panTro5.chr3 200078749 7 + 202621043 CGGCTCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58674 7 + 190779 CGGCTCC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23561 7 + 106623 CAGCTCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743863 7 + 123690457 CAGCTCC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432604 7 + 204787373 CGGCCCC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40414 7 + 192460366 CGGCCCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515715 7 + 19675229 CGGCCCC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450571 7 + 16847902 CGGCCCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388024 7 - 91754291 CGGCCCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542255 7 - 1977891 CGGCCCC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424108 7 + 7796314 CGGCTCC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900986 7 - 74750902 CTGCTCT- i calJac3.chr17 I 3 C 0 s saiBol1.JH378146 432482 7 + 17725628 CTGCTCC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394794 7 - 6778120 CTGCTCC- i cebCap1.NW_016107444v1 C 0 I 48 s otoGar3.GL873829 396522 7 - 608964 CCACTCC- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29049263 7 + 31377067 CTGCTCC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871899 8 + 6579706 CTGCTGTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 49113 57 - 69927 I a score=36863.000000 s hg38.chr3_KI270779v1_alt 94637 7 + 205312 CTCGCTT s panTro5.chr3 200078756 7 + 202621043 TCTGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58681 7 + 190779 CTCGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23568 7 + 106623 CTCGCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743870 7 + 123690457 CTCGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432611 7 + 204787373 CTCGCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40421 7 + 192460366 CTCGCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515722 7 + 19675229 CTCGCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450578 7 + 16847902 CTCGCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388031 7 - 91754291 CTCGCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542262 7 - 1977891 CTCGCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424115 7 + 7796314 CTCACTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 900993 7 - 74750902 GTGGCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432489 4 + 17725628 GTGG--- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 396530 7 - 608964 CTCGCTT i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29049270 1 + 31377067 ----C-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871907 7 + 6579706 CCCCCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7399937 606 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 49113 57 - 69927 I e cebCap1.NW_016107444v1 394801 48 - 6778120 I a score=768700.000000 s hg38.chr3_KI270779v1_alt 94644 120 + 205312 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCCC-CGCCTCAATCCACCCAGCTAC--CCCGAAAGGCACAATCATAGGCCTTTCTCGTCTTTTAAGGGTTTTTACTT-----------CCATGGGGAA s panTro5.chr3 200078763 117 + 202621043 TGGCAAGAG-CACTGCC--CCCCGTCTCTGGAGGTCCCC----CCTCAATCCACCCAGCTACCACACGAAAGGCAAAATCATAGGCCTTTCCTATCTTTTAAAGGGTTTTACTT-----------CCATGGGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58688 119 + 190779 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCCC-CCCCTCAATCCACCCAGCTAC--CCCGAAAGGCAAAATCATAGGCCTTTCTCATCTTTTAAGGG-TTTTACTT-----------CCATGGGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23575 120 + 106623 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCCC-CGCCTCAATCCACCCAGCTAC--CCTGAAAGGCAAAATCATAGGCCTTTCTCGTCTTTTAAGGGTTTTTACTT-----------CCATGGGGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743877 119 + 123690457 CGGCAGCAG-CACTGCCCACCCTGTCGCTGGAGGTTCCTC-CCCCTCAATCCACCCAGCTAC--CCCGAAAGGCA-AATCATAGGCCTTTCTCGTCTTTTAAGGGTTTTTACTT-----------CCATGGGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432618 107 + 204787373 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCTC-C-CTTCGGTCCACCCAGCCAC--CCCGAA------------AGGCCTTTCTCATCTTTGAAGGGTTTTGACTT-----------CCGTGGGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40428 107 + 192460366 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCTC-C-CTTCGGTCCACCCAGCCAC--CCCGAA------------AGGCCTTTCTCATCTTTGAAGGGTTTTGACTT-----------CCGTCGGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515729 107 + 19675229 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCTC-C-CTTCGGTCCACCCAGCCAC--CCCGAA------------AGGCCTTTCTCTTCTTTGAAGGGTTTTGACTT-----------CCGTGGGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450585 107 + 16847902 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGCTCCTC-C-CTTCGGTCCACCCAGCCAC--CCCGAA------------AGGCCTTTCTCATCTTTGAAGGGTTTTGACTT-----------CCGTGGGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388038 107 - 91754291 TGGCAGCAG-CACTGCCCACCCTGTCTTTGGAGGTTCCTC-C-CTTCGGTCCACCCTGCTAC--CCCGAA------------AGGCCTGTCTCATCTTTGAAGGGTTTTGACTT-----------CCGTGGGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542269 107 - 1977891 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGCTCCTC-C-CTTCGGTCCACCCAGCCAC--CCCGAA------------AGGCCTTTCTCATCTCTGAAGGGTTTTGACTT-----------CCGTGGGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424122 119 + 7796314 TGGCAGCAG-CACTGCCCACCCTGTCTCTGGAGGTTCCTC-C-CTTCAGTCCACCCAGCCAC--CCCGAAAGGCAGAACCATAGGCCTTTCTCATCTTTTAAGGGTTTTGACTT-----------CCATGGGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901000 63 - 74750902 CTG-AGCAG-CGCTCCCCACCCTGCCTCTGGCGGCTCCTC-C-CC------------GTCAC--TCTG-------------------------------------------CTT-----------CCATGGGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432493 43 + 17725628 ---------------------CTGCCTCTGGAGGCTCCTC-C-CC-------------TCAC--TCTG-------------------------------------------CTT-----------CCGTGGGGAG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7400543 119 + 22200726 TGGCAGCAG-CACTCCCCACGCTGCCTCTGGAGTTCCCTC-T-CCCCGGTCCTCCCAGCTAC--CTCTAATGACAAAACCATAGGCCTTTCTTGTATTTTAAGGGTTTTTACTT-----------CCATGGGGAA i proCoq1.NW_012133858v1 I 606 I 106 s otoGar3.GL873829 396537 131 - 608964 TGGTAGCAG-TACCACCAACACTGTCTCTGGAGGTTCCTCTT-CCTCAATCCTCCCAGCTAC--CTCTAAAAAAAAAACCATAGGCCTTTCTTGTATTTCAAGAGTTTTTTTTTTTTTTTAATAACTGTAGGGAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29049271 107 + 31377067 --------------ACCTGCTCGGTCTGGGTAGCTGCCTC-TCCCCTACTCCTCCCAGCTAC--CTCTAAGTACAAAACCACAGATGTTTCCTGTATTTGAAGGGTTTTTACTT-----------CCGTGGGGAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3871914 119 + 6579706 TTGAAGCAGTcaccacctgtactgtctccagggcgtcctc-tcccccagtcctccccaaaac--ctctaaagataaaacc--aaggctttcttatgttttagtggttttcattt-----------ccatcgggaa i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 49113 57 - 69927 I e cebCap1.NW_016107444v1 394801 48 - 6778120 I a score=8830.000000 s hg38.chr3_KI270779v1_alt 94764 3 + 205312 CT-A s panTro5.chr3 200078880 4 + 202621043 GTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58807 3 + 190779 GT-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23695 3 + 106623 GT-A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743996 3 + 123690457 GC-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432725 3 + 204787373 GT-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40535 3 + 192460366 GT-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515836 3 + 19675229 GT-A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450692 3 + 16847902 GT-A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388145 3 - 91754291 GT-A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542376 3 - 1977891 GT-A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424241 3 + 7796314 GT-A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901063 3 - 74750902 GC-G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432536 3 + 17725628 GC-G i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 396668 3 - 608964 AT-A i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29049378 3 + 31377067 AC-A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872033 3 + 6579706 ac-a i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400662 106 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 49113 57 - 69927 I e cebCap1.NW_016107444v1 394801 48 - 6778120 I a score=214507.000000 s hg38.chr3_KI270779v1_alt 94767 24 + 205312 TGTGTTGGATGAGAAAAGTATCCG s panTro5.chr3 200078884 23 + 202621043 TGT-TTGGATGAGAACAGTATCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58810 24 + 190779 TGTGTTGGATGAGAAAAGGATCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23698 24 + 106623 TGTGTTGGATGAGAAAAGTATCCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120743999 24 + 123690457 TGTGTTGGATGAGAAAAGTATCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432728 24 + 204787373 TGTGTTGGATGAGAAAAGTGGCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40538 24 + 192460366 TGTGTTGGATGAGAAAAGTGGCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515839 24 + 19675229 TGTGTTGGATGAGAAAAGTGGCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450695 24 + 16847902 TGTGTTGGATAAGAAACGTGGCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388148 24 - 91754291 TGTGTTGGATGAGAAAAGTGGCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542379 24 - 1977891 TGTGTTGGATGAGAAACGTGGCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424244 24 + 7796314 TGTGTTGGATGAGAAAAGTGGCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901066 24 - 74750902 TATGGTGGATGAGAAAAGTGTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432539 24 + 17725628 TGTGGTAGATGGGGAAAGTATCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394849 24 - 6778120 TGTGGTGGATGAGGGAAGTATCCC i cebCap1.NW_016107444v1 I 48 C 0 s otoGar3.GL873829 396671 24 - 608964 TTTGTTAGATGAGAAAAGAATCCA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29049381 24 + 31377067 CCTGCTGGATGAGGGAAGTTTCGA i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3872036 22 + 6579706 TTTGTTGTATAAGAAAAGTGTT-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400662 106 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I e aotNan1.NW_018503669v1 49113 57 - 69927 I a score=22302.000000 s hg38.chr3_KI270779v1_alt 94791 2 + 205312 GG s panTro5.chr3 200078907 2 + 202621043 GG i panTro5.chr3 C 0 T 94341 s panPan2.chrUn_NW_014024201v1 58834 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23722 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744023 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432752 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40562 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515863 2 + 19675229 GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450719 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388172 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542403 2 - 1977891 GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424268 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901090 2 - 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432563 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394873 2 - 6778120 GG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49170 2 - 69927 GG i aotNan1.NW_018503669v1 I 57 C 0 s otoGar3.GL873829 396696 1 - 608964 G- i otoGar3.GL873829 I 1 I 1 s canFam3.chr33 29049406 2 + 31377067 GG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3872058 2 + 6579706 GG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400662 106 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I a score=229766.000000 s hg38.chr3_KI270779v1_alt 94793 22 + 205312 GAAGGGGACAGAGG----TTCAGAAA s panTro5.chr3 199984568 22 + 202621043 GAAGGGGACAGAGG----TTCAGAAA i panTro5.chr3 T 94341 C 0 s panPan2.chrUn_NW_014024201v1 58836 22 + 190779 GAAGGGGACAGAGG----TTCAGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23724 22 + 106623 GAAGGGGACAGAGG----TTCAGAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744025 22 + 123690457 GAAGGAGACACAGG----TTCAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432754 22 + 204787373 GAAGGGGACACAGG----TTCAGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40564 22 + 192460366 GAAGGGGACACAGG----TTCAGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515865 22 + 19675229 GAAGGGGACACAGG----TTCAGAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450721 22 + 16847902 GAAGGGGACACAGG----TTCAGAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388174 22 - 91754291 GAAGGGGACACAGG----TTCAGAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542405 22 - 1977891 GAAGGGGACACAGG----TTCAGAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424270 22 + 7796314 GAAGGGGACACAGG----TTCAGAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901092 21 - 74750902 GAAGGTGACACAGG----TTCAG-AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432565 21 + 17725628 GAAGGGGACACAGG----TTCAG-AA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394875 21 - 6778120 GAAGGGGACACAGG----TTCAG-AA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49172 21 - 69927 GAAGGGGACACAGG----TGCAG-AA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 396698 26 - 608964 GAGAATGACAAGGATTCTTTCAGAAA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29049408 26 + 31377067 GCAGGTGACAGGGATTTCTTCCAAAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872060 26 + 6579706 GAAAAAAACAAAGATTCATTCAGGAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400662 106 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I e mm10.chr16 65410920 1607 - 98207768 I a score=258357.000000 s hg38.chr3_KI270779v1_alt 94815 23 + 205312 GCTCTGCGA-GTCCTGGACGCTGG s panTro5.chr3 199984590 23 + 202621043 GCTCTGCGA-GTCCTGGACGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58858 23 + 190779 GCTCTGCGA-GTCCTGGACGCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23746 23 + 106623 GCTCTGCGA-GTCCTGGACACTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744047 23 + 123690457 GCTCTGCGA-GTCCTGGACGCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432776 23 + 204787373 GCTCTGCGA-GTCCTGAACGCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40586 23 + 192460366 GCTCTGCGA-GTCCTGGACGCTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515887 23 + 19675229 GCTCTGCGA-GTCCTGGACGCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450743 23 + 16847902 GCTCTGCGA-GTCCTGGACGCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388196 23 - 91754291 GCTCTGCAA-GTCCTGGACGCTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542427 23 - 1977891 GCTCTGCGA-GTCCTGGACGCTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424292 23 + 7796314 GCTCTGCGA-GTCCTGGACGCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901113 23 - 74750902 GCTCCTCGA-GTCCTGGCCACTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432586 23 + 17725628 GCTCCTCGA-GTCCTGGCCACTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394896 23 - 6778120 GCTCCTCGA-GTCCTGGCCACTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49193 23 - 69927 GCTCCTCCA-GTCCTGGCCACTGC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 396724 24 - 608964 ATTATGAGATTTCCTGGTCTCTGC i otoGar3.GL873829 C 0 I 29 s mm10.chr16 65412527 22 - 98207768 GCTCTGCAG-TCCTTGGCTCATG- i mm10.chr16 I 1607 I 6 s canFam3.chr33 29049434 23 + 31377067 ATTCTGAGA-GTCCTGGTCCCTGC i canFam3.chr33 C 0 I 26 s dasNov3.JH569502 3872086 23 + 6579706 ATTCTGAGA-GTCCTAGTGCCTGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400662 106 + 22200726 I e micMur3.chr1 25880148 827 - 114275543 I a score=2162846.000000 s hg38.chr3_KI270779v1_alt 94838 162 + 205312 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACACAT-CCCCTCTTAAAGAC-GCAGGCCGATAGCCAG--CAGATCCTGGGGCTTGCTGGCCCCAAGTG-AGTTGTCAGGGTTTCAGAGGACACCAGTCATGGCAACCCCAGCTCCATGGCTGCCA s panTro5.chr3 199984613 162 + 202621043 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGATGGATGCTG-GCCCCACACAT-CCCCTCTTAAAGAC-GCAGGCCGATAGCCAG--CAGATCCTGGGGCTTGCTGGCCCCAAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGCCATGGCAACCCCAGCTCCATGGCTGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 58881 163 + 190779 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACACATCCCCCTCTTAAAGAC-GCAGGCCGATAGCCAG--CAGATCCTGGGGCTTGCTGGCCCCAAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGCCATGGCAACCCCAGCTCCATGGCTGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23769 162 + 106623 -----------------TCTGCCTTCTTGGCTTACCCTGGAAGATGGACGCTG-GCCCCACACAT-CCCCTCTTAAAGAC-GCAGGCCGATAGCCAG--CAGATCCTGGGGCTTGCTGGCCCCAAGTG-AGTTGTCAGGGCTTCAGAGGATGCCAGCCATGGCAACCCCAGCTCCATGGCTGCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744070 162 + 123690457 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACACAT-CCCCTCTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCAGGGCTTGCTGGCCCCAAGTG-AGCTGTCGGGGCTTCAGAGGACGCTAGTCATGGCAACCCCAGCTCCGTGGCTGCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432799 162 + 204787373 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGGCGCTG-GCCCCACTCAT-CCCCTGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGGGGCTTGCTGGCCCCTAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40609 162 + 192460366 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACTCAT-CCCCTGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGGGGCTTGCTGGCCCCTAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 515910 162 + 19675229 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGGCGCTG-GCCCCACTCAT-CCCCTGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGGGGCTTGCTGGCCCCTAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450766 162 + 16847902 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACTCAT-CCCCCGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGGGGCTTGCTGGCCCCTAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388219 162 - 91754291 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACTCAT-CCCCTGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGTGGCTTGCTGGCCCCTAGTG-AGTGGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542450 162 - 1977891 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACTCAT-CCCCTGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGGGGCTTGCTGGCCCCTAGTG-AGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424315 162 + 7796314 -----------------TCTGCCTTCTTGGCTCACCCTGGAAGGTGGATGCTG-GCCCCACTCAT-CCCCTGTTAAAGAC-GCAGGCCGAGAGCCAG--CAGATCCCGGGGCTTGCTGGCCCCTAGTG-AGTTGTCAGGGCTTCAGAGGACACCAGTCATGGCAGCCCCAGCTCTGTGGCTGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901136 111 - 74750902 -----------------TCTGTCTTCTTGGCTCACCCTGGAAGGCGGACACTG-GCCCCACACAT-CCCTTCTCAAAGCC-GCAGGCCGAGAACCAC--AGGATCCCGGGGCTTGCTGGCCCCAAGTG-GGTTG--------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432609 162 + 17725628 -----------------CCTGTCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACACGT-CCCTTCTCAAAGCC-GCAGGCCAGGAGCCAC--AGGATCCCAGGGCTTGCTGGCCCCAAGCG-GGTTGTCAGGGCTTCGGAGGGCGCCAGGCAGGGCAGCGCCGGCTCCATGGCTGCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 394919 162 - 6778120 -----------------CCTGTCTTTTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACAGGT-CCCTTCTCAAAGCC-ACAGGCCGAGAGCCAC--AGGATCCCGGGGCTGGCTGGCCCCAAGTG-GGTTGTCAGGGCTTCAGAGGACGCCAGTCAGGGCAGCTCCAGCTCCGTGCCCGCCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49216 162 - 69927 -----------------TCTGTCTTCTTGGCTCACCCTGGAAGGTGGACGCTG-GCCCCACACAT-CCCTTCTCAAAGCC-GCAGGCCGAGAGCCAC--AGGATCCCGGGGCTTGCTGGCCCCAAGTG-GGTTGTCAGGGCTTTGGAGGATGCCAGTCAGGGCAGCTGCAGCTCCGTGGCTGCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25880975 164 - 114275543 -----------------TCTGCCTTCTTTGCTCACCCTTAAAGGTGGATCGTG-GCCCCACACAT-TCCCTTGGAAGGCC-ACAGACCGATAATCAGCTGGGATTGTGGGGCTTGCTGGCCTCAAGTG-GGCTGTCGGGGCTTCAGAAGGCACCAGTCTGGGCAACCCCAACTCTGTGGCTGCCA i micMur3.chr1 I 827 C 0 s proCoq1.NW_012133858v1 7400768 164 + 22200726 -----------------TCTGCCTTTCTTGCTCACCCTTGAAGGTGGATCCTG-GCCCCACACAT-TCCCTCTGAAGGCC-ACACGCCAATAATCAGCTAGGACTGTGGGGCTTGCTGACCTCAAGTG-GGTTGTCAGGGCTTCAGCAGACACCAGTCAGGGCAACCCCGGCTCTGTGGCTGCCA i proCoq1.NW_012133858v1 I 106 I 139 s otoGar3.GL873829 396777 162 - 608964 -----------------TCGAGTTTCTTTGCTCACCCTTGCAGGTGGATCCTG-GCCCCACACAT-TCCCATTGAAGGTC-ACAGACCAATAATCAG-TGAGACTGTGGAGCTTGCTGGCCTCAAGTG-GGTTGTCA-GGCTTCAGAGCACACCAGTTAGGGCAACCCCAGCTCTGTGCTTGCCA i otoGar3.GL873829 I 29 C 0 s mm10.chr16 65412555 143 - 98207768 -----------------CCTGTCTTCTTTGCCTGCCTTAGTCGGTATATGCTG--------TGAG-GCT------GAGCT-GTAGACCCGGGGTCAG--------CTGGGATCCTTTGGGGCAGGGGGCAGTTGTCAGGGCTTCAGAGAGCACTAGTTGGGGTAGC-ATGTCTTCGGGGCTGCTG i mm10.chr16 I 6 C 0 s canFam3.chr33 29049483 154 + 31377067 -----------------CCTGGCTTCTTTGCCCCCCATCAAGGCTGTGTCCTG-GCCCCAAGCCT-TCCCTCTGATGGCT-TCAGACCAATAATCAA-CTCAATTCTGAGGCCTGCTTGTCTCAACAG-GGT--------CATCAGAGGACATCAGTCAGGG-GATCCCAGTTCCATGGTTGACC i canFam3.chr33 I 26 C 0 s dasNov3.JH569502 3872109 181 + 6579706 TCTGCAGTTCTTAGCCTTCTACCTTCTTTGCT-ACCCTGGAAGCTGGATCATGGGCACAATGTAT-TCCCTCTGATGGCCTGCAGACTCATGATCAA-TGAAGCTTCTGGGTTTGCTTGCCTCAAATG-GGTAAATTGGGTTTCCAAGCACGTATGCCAGGGCAACCCCAGTTCCATGGGTACCA i dasNov3.JH569502 C 0 C 0 a score=291960.000000 s hg38.chr3_KI270779v1_alt 95000 27 + 205312 CACAGGCCTGGGCTTCCCAGGACTGCC s panTro5.chr3 199984775 27 + 202621043 CACAGACCTGGGCTTCCCAGAACTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59044 27 + 190779 CACAGGCCTGGGCTTCCCAGAACTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23931 27 + 106623 CACAGGCCTGGGTTTCCCAGGACTGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744232 26 + 123690457 C-TGGGCCTGGGCTTCCCAGGACTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432961 27 + 204787373 CATGGGCCTGGGCTTCCCAGGACTGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40771 27 + 192460366 CATGGGCCTGGGCTTCCCAGGACTGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516072 27 + 19675229 CATGGGCCTGGGCTTCCCAGGACTGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450928 27 + 16847902 CACGGGCCTGGGCTTCCCAGGACTGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388381 27 - 91754291 CACGGGCCTGGGCTTCCCAGGACTGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542612 27 - 1977891 CACGGGCCTGGGCTTCCCAGGACTGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424477 27 + 7796314 CACGGGCCTGGGCTTCCCAGAACTGCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 432771 25 + 17725628 CACGGGCCTGGGCCTCCCAGGACTG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395081 27 - 6778120 CAGGGGCCTGGGCCTCCCAGGACTGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49378 27 - 69927 CACGGGCCTGGGCCTCCCAGGACTGCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881139 24 - 114275543 ---GGGGCTGGGCTTCCCAGCACTGCC i micMur3.chr1 C 0 I 114 s otoGar3.GL873829 396939 27 - 608964 CATGGAACTGGGCTTCTCAGCACTGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412698 27 - 98207768 TGAAGGCTTTGGCTTCTCTGTGCTGCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29049637 25 + 31377067 CATGGGGCCGGTCTTCT--GATACACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872290 7 + 6579706 --------------------CACTGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400932 139 + 22200726 I e calJac3.chr17 901247 0 - 74750902 C a score=789821.000000 s hg38.chr3_KI270779v1_alt 95027 67 + 205312 TCCTTCTTGTTCGCTTATGTAGATGAAAAATGA-GGTAACGGCA-CTCCCCTGCCCCACCCTCCTCCCA s panTro5.chr3 199984802 67 + 202621043 TCCTTCTTGTTCGCTTATGTAGATGAAAAGTGA-GGTAACGGCA-CTCCCCCGCCCCACCCTCCTCCCA i panTro5.chr3 C 0 I 94393 s panPan2.chrUn_NW_014024201v1 59071 67 + 190779 TCCTTCTTGTTCGCTTATGTAGATGAAAAGTGA-GGTAACGGCA-CTCCCCCGCCCCACCCTCCTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 23958 67 + 106623 TCCTTCTTGTTCGCTTATGTAGATGAAAAATGA-GGTAACGGCA-CTCCCCCGCCCCACCCTCCTCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744258 66 + 123690457 TCCTTCTTGTTCGCTTATGTAGATGAAAAATGA-GGTAACGGCA-CTCCCCTG-CCCACCCTCCCCCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202432988 67 + 204787373 TCCTTCTTGTTCACTTATGTAGATGAAAAAGGA-GGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40798 67 + 192460366 TCTTTCTTGTTCGCTTATGTAGATGAAAAAGGA-GGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516099 67 + 19675229 TCCTTCTTGTTCGCTTATGTAGATGAAAAAGGA-GGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 450955 67 + 16847902 TCCTTCTTGTTCGCTTATGTAGATGAAAAAGGA-GGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388408 67 - 91754291 TCCTTCTTGTTCGCTTATGTAGATGAAAAAGGA-GGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542639 67 - 1977891 TCCTTCTTGTTCGCTTATGTAGAAGAAAAAGGA-GGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424504 68 + 7796314 TCCTTCTTGTTCGCTTATGTAGATGAAAAAGGAGGGTAACAGCA-CTTCCCCTCCCCACCCTCCTCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901247 64 - 74750902 ---TCCTTCTTTGCTTATGCAGATGAAAAACGA-GGTAACAGCA-CTGCCCGTCCCCACCCTCCTCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432796 66 + 17725628 -CCTCCTCCTTTGCTTACGCAGATGAAAAACGA-GGTAACAGCA-CCGCCCGTCCCCACCCTCCTCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395108 67 - 6778120 TCCTCCTTCTTTGCTTACGCAGATGAAAAACGA-GGTAACAGCA-CTGCCCGTCCCCACCCTCCTCCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49405 67 - 69927 TCCTCCTTCTTTGCTTATGCAGATGAAAAACGA-GGTAACAGCA-CTGCCCGTCCCCACCCTCCTCCCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 396966 62 - 608964 TCCTTTTTTCTTGTTTAAATAGATAAAAAATGG-GATAAGAGCACCTCCCCCTCCCCATCCTC------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412725 45 - 98207768 TTCATCCTCTAGGTTTATGTAGATGA----TGA----------------CCCTCCATGCCATCCA---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29049662 68 + 31377067 TCCTCCTTCCTTGTATGTGTAGATGAAAAATGA-AATAGAAGCAACTTCCCCTCCCCACCCTCCTCCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872297 67 + 6579706 TCCTTCTTCCTTGTTTAATTAGATGAAAAATTG-GATAAAACCA-TTCCCCTTACCCACCCTCCTCCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400932 139 + 22200726 I e micMur3.chr1 25881163 114 - 114275543 I a score=358648.000000 s hg38.chr3_KI270779v1_alt 95094 35 + 205312 GAAGTG-CCCAGGGTGTAAACGCAAT-AGCT-----------TGTGTG s panTro5.chr3 200079262 36 + 202621043 GAAGTG-CCCAGGGCGTAAACGCAATAAGCT-----------TGTGTG i panTro5.chr3 I 94393 T 94394 s panPan2.chrUn_NW_014024201v1 59138 35 + 190779 GAAGTG-CCCAGGGTGTAAACGCAAT-CGCT-----------TGTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24025 35 + 106623 GAAGTG-CCCAGGGTGTAAACGCAAT-AGCT-----------TGTGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744324 35 + 123690457 GAAGTG-CCCAGGGTGTAAACGCGAT-AGCT-----------TGTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433055 35 + 204787373 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------TGCGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40865 35 + 192460366 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------TGCGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516166 35 + 19675229 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------TGCGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451022 35 + 16847902 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------CGCGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388475 35 - 91754291 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------CGTGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542706 35 - 1977891 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------TGCGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424572 35 + 7796314 GAAGTG-CCCAGGGTGTAAACGAAAT-CGCT-----------TGTGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901311 35 - 74750902 GAGGTG-CGCAGGGTATAAACACAGT-CGCT-----------TGCGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432862 36 + 17725628 GAGGTGCCCCGGGGTATAAACGCAGT-AGCT-----------TGCGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395175 35 - 6778120 GAGGTG-CCCAGGGAATAAACGCAGT-AGCT-----------TGCGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49472 35 - 69927 GAGGTG-CCCAGGGTATAAATGCAGT-GGCT-----------CACGTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397028 42 - 608964 ----TA-CCCAGATCATAAACATAAG-AGCTCTGACATCTTATGTGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412770 24 - 98207768 ATAGCA-CCTAGGGCATAAACTGTG----------------------- i mm10.chr16 C 0 I 4 s canFam3.chr33 29049730 34 + 31377067 -GGGTG-CCCAGGGCATAAGCACAAG-AGCT-----------TGTGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872364 35 + 6579706 GCAGTA-TCCAGGGCATAAACACAAG-AGTA-----------GGTGTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400932 139 + 22200726 I e micMur3.chr1 25881163 114 - 114275543 I a score=271004.000000 s hg38.chr3_KI270779v1_alt 95129 31 + 205312 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA s panTro5.chr3 199984904 31 + 202621043 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i panTro5.chr3 T 94394 C 0 s panPan2.chrUn_NW_014024201v1 59173 31 + 190779 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24060 31 + 106623 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744359 31 + 123690457 AAGC----CCA--CTGGAACCCA-GGCTCAACAAGTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433090 31 + 204787373 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40900 31 + 192460366 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516201 31 + 19675229 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451057 31 + 16847902 AAGT----CCA--CTGGAACCCA-AGCTCACCAAGTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388510 31 - 91754291 AAAT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542741 31 - 1977891 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424607 31 + 7796314 AAGT----CCA--CTGGAACCCA-GGCTCACCAAGTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901346 14 - 74750902 AAG------------------------TCACCGAGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432898 31 + 17725628 AAGG----CTG--CTGGAACTCA-GCTTCACCGAGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395210 31 - 6778120 AAGT----CCA--GTGGAACTCA-GCCTCACCGAGTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49507 31 - 69927 AAGT----CCA--CTGGAGCTCA-GCCTCACTGGGTCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397070 25 - 608964 GCAT----CC--------ATCAA-AGCTCACAAATTCG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412798 25 - 98207768 CAGT----CCA--CTGGCAC-------TCACCAGGTTG i mm10.chr16 I 4 C 0 s canFam3.chr33 29049764 36 + 31377067 AAGTCGGCCCA--CTGGGACTCGTGGCTTACAAAGCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872399 34 + 6579706 GAGT----CAGTCCTGGCACTCAAGGCTTACAGAATTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7400932 139 + 22200726 I e micMur3.chr1 25881163 114 - 114275543 I a score=601096.000000 s hg38.chr3_KI270779v1_alt 95160 38 + 205312 GTCTT-AACCAACACAGGCCCCAGCACCCGCAGAGCAGA s panTro5.chr3 199984935 38 + 202621043 GTCTT-AACCAACACAGGCCCCAGCACCCGCAGAGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59204 38 + 190779 GTCTT-AACCAACACAGGCCCCAGCACCCGCAGAGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24091 38 + 106623 GTCTT-AACCAACACAGGCCCCAGCACCCGCAGAGCAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744390 38 + 123690457 GTCTT-AACCAACACAGGCCCCAGCACCCGCAGAGCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433121 38 + 204787373 ATCTT-AACCAACACAGGCCCCAGCAGCCGCAGAGCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40931 38 + 192460366 ATCTT-AACCAACACAGGCCCCAGCAGCCGCAGAGCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516232 38 + 19675229 ATCTT-AACCAACACAGGCCCCAGCAGCCGCAGAGCAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451088 38 + 16847902 ATCTT-AACCAACACAGGCCCCAGCAGCCGCAGAGCAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388541 38 - 91754291 ATCTT-AACCAACACAGGCCCCGGCAGCCACAGAGCAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542772 38 - 1977891 ATCTT-AACCAACACAGGCCCCAGCAGCCGCAGAGCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424638 38 + 7796314 ATCTT-AACCAACACAGGCCCCAGCAGCCGCAGAGCAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901360 38 - 74750902 GTCTT-AACCACCACAGGCCCTGGCACCAGCAGCCCAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432929 38 + 17725628 CTCTT-AACCACCACAGGCCCTGGCACCAGCAGACCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395241 35 - 6778120 GTCTT----CACCACAGGCCCTGGCACCGGCAGACCAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49538 38 - 69927 GTCCT-AACCACCACAGGCCCCGGCACCAGCAGACCAGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881277 38 - 114275543 GTCTT-ACCCAACACAGGCCCCAGCACCAGCAGACCAGA i micMur3.chr1 I 114 I 122 s proCoq1.NW_012133858v1 7401071 38 + 22200726 GTCTT-ACCCAACACAGGCCCCAGCACCAGCAGACCAGA i proCoq1.NW_012133858v1 I 139 C 0 s otoGar3.GL873829 397095 39 - 608964 GTCTTAACCCAACACAGGCCCACACACCAGCAGACCAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412823 38 - 98207768 TTCTC-ATCCCACACAGGTCTCGACATTAGCAGATCAGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29049800 38 + 31377067 GTCTT-ACCCAACACAGGCCCCAGCACCAGCAGACCAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872433 38 + 6579706 GTTTT-ATCCAATGCAGGCCCCAGTTCCAGGAGATCAGA i dasNov3.JH569502 C 0 C 0 a score=15824.000000 s hg38.chr3_KI270779v1_alt 95198 3 + 205312 CAC s panTro5.chr3 199984973 3 + 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59242 3 + 190779 CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24129 3 + 106623 CAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744428 3 + 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433159 3 + 204787373 CGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40969 3 + 192460366 CGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516270 3 + 19675229 CGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451126 3 + 16847902 CGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388579 3 - 91754291 TGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542810 3 - 1977891 CGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424676 3 + 7796314 CGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901398 3 - 74750902 AAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 432967 3 + 17725628 AAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395276 3 - 6778120 AAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49576 3 - 69927 AAC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7401109 3 + 22200726 CAC i proCoq1.NW_012133858v1 C 0 I 99 s otoGar3.GL873829 397134 3 - 608964 CAC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65412861 3 - 98207768 TCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29049838 3 + 31377067 TCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872471 3 + 6579706 CTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25881315 122 - 114275543 I a score=144803.000000 s hg38.chr3_KI270779v1_alt 95201 11 + 205312 TGCGATGACAA s panTro5.chr3 199984976 11 + 202621043 TGCGATGACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59245 11 + 190779 TGCGATGACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24132 11 + 106623 TGCGATGACAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744431 11 + 123690457 TGCGACGACAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433162 11 + 204787373 TGCGATGACAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40972 11 + 192460366 TGCGATGACAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516273 11 + 19675229 TGCGATGACAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451129 11 + 16847902 TGCGATGACAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388582 11 - 91754291 TGCGATGACAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542813 11 - 1977891 TGCGATGACAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424679 11 + 7796314 TGCGATGACAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901401 11 - 74750902 TGCGATGACAG i calJac3.chr17 C 0 I 62 s saiBol1.JH378146 432970 11 + 17725628 TGCGGTGACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395279 11 - 6778120 TGCGGTGACAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49579 11 - 69927 TGCGATGACTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397138 10 - 608964 TG-GGTGACAG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65412864 11 - 98207768 TTTGGTGACAA i mm10.chr16 C 0 I 1 s canFam3.chr33 29049841 11 + 31377067 TGTGGTGACAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872474 11 + 6579706 TTTGGTGACAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401112 99 + 22200726 I e micMur3.chr1 25881315 122 - 114275543 I a score=13179.000000 s hg38.chr3_KI270779v1_alt 95212 3 + 205312 CGG s panTro5.chr3 199984987 3 + 202621043 CGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59256 3 + 190779 CGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24143 3 + 106623 CGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744442 3 + 123690457 CAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433173 3 + 204787373 TGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40983 3 + 192460366 TGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516284 3 + 19675229 TGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451140 3 + 16847902 CGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388593 3 - 91754291 TGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542824 3 - 1977891 TGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424690 3 + 7796314 GGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 432981 3 + 17725628 CAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395290 3 - 6778120 CAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49590 3 - 69927 CAG i aotNan1.NW_018503669v1 C 0 I 43 s otoGar3.GL873829 397148 3 - 608964 CAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412876 2 - 98207768 CA- i mm10.chr16 I 1 C 0 s canFam3.chr33 29049852 3 + 31377067 CAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872485 3 + 6579706 CAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401112 99 + 22200726 I e micMur3.chr1 25881315 122 - 114275543 I e calJac3.chr17 901412 62 - 74750902 I a score=158120.000000 s hg38.chr3_KI270779v1_alt 95215 14 + 205312 ACGACACAGAAGTG s panTro5.chr3 199984990 14 + 202621043 ACGACACAGAAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59259 14 + 190779 ACGACACAGAAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24146 14 + 106623 ACGACACAGAAGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744445 14 + 123690457 ACGACACAGAAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433176 14 + 204787373 ACGACACAGAAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 40986 14 + 192460366 ACGACACAGAAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516287 14 + 19675229 ACGACACAGAAGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451143 14 + 16847902 ACGACACAGAAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388596 14 - 91754291 ACGACACAGAAGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542827 14 - 1977891 ATGACACAGAAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424693 14 + 7796314 ATGACGCAGAAGTG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 432984 14 + 17725628 ACGCCACAGAAGTG i saiBol1.JH378146 C 0 I 57 s cebCap1.NW_016107444v1 395293 14 - 6778120 ACGCCACAGAAGTG i cebCap1.NW_016107444v1 C 0 I 57 s otoGar3.GL873829 397151 14 - 608964 ATGACATAGAAGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412878 14 - 98207768 ACAACATGGAAGTG i mm10.chr16 C 0 I 1 s canFam3.chr33 29049855 14 + 31377067 ACCACGTAGAAGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872488 14 + 6579706 ACCACATCAAAATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401112 99 + 22200726 I e micMur3.chr1 25881315 122 - 114275543 I e aotNan1.NW_018503669v1 49593 43 - 69927 I e calJac3.chr17 901412 62 - 74750902 I a score=8674.000000 s hg38.chr3_KI270779v1_alt 95229 2 + 205312 -CC s panTro5.chr3 199985004 2 + 202621043 -CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59273 2 + 190779 -CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24160 2 + 106623 -CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744459 2 + 123690457 -CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433190 2 + 204787373 -CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41000 2 + 192460366 -CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516301 2 + 19675229 -CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451157 2 + 16847902 -CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388610 2 - 91754291 -CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542841 2 - 1977891 -CC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424707 2 + 7796314 -CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901474 2 - 74750902 -CT i calJac3.chr17 I 62 C 0 s saiBol1.JH378146 433055 2 + 17725628 -CT i saiBol1.JH378146 I 57 C 0 s cebCap1.NW_016107444v1 395364 2 - 6778120 -CT i cebCap1.NW_016107444v1 I 57 C 0 s otoGar3.GL873829 397165 2 - 608964 -CC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412893 1 - 98207768 -C- i mm10.chr16 I 1 C 0 s canFam3.chr33 29049869 2 + 31377067 -CC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872502 2 + 6579706 TC- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401112 99 + 22200726 I e micMur3.chr1 25881315 122 - 114275543 I e aotNan1.NW_018503669v1 49593 43 - 69927 I a score=79058.000000 s hg38.chr3_KI270779v1_alt 95231 12 + 205312 ---------------------------------------------------------CGCTATGACTCT s panTro5.chr3 199985006 12 + 202621043 ---------------------------------------------------------CGCTATGACTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59275 12 + 190779 ---------------------------------------------------------CGCTATGACTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24162 12 + 106623 ---------------------------------------------------------CGCTATGACTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744461 12 + 123690457 ---------------------------------------------------------CGCTATGACTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433192 12 + 204787373 ---------------------------------------------------------CGCTATGATTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41002 12 + 192460366 ---------------------------------------------------------CGCTATGATTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516303 12 + 19675229 ---------------------------------------------------------CGCTATGATTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451159 12 + 16847902 ---------------------------------------------------------CGCTCCGACTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388612 12 - 91754291 ---------------------------------------------------------CACTATGATTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542843 12 - 1977891 ---------------------------------------------------------CGCTCTGACTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424709 12 + 7796314 ---------------------------------------------------------CGCTATGACTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901476 12 - 74750902 ---------------------------------------------------------CACTGAGACCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433057 12 + 17725628 ---------------------------------------------------------TACCGAGACCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395366 12 - 6778120 ---------------------------------------------------------CACTGAGACCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49636 12 - 69927 ---------------------------------------------------------CACTGAGACCTC i aotNan1.NW_018503669v1 I 43 C 0 s otoGar3.GL873829 397167 12 - 608964 ---------------------------------------------------------TATGGTGACTCC i otoGar3.GL873829 C 0 I 21 s mm10.chr16 65412894 12 - 98207768 ---------------------------------------------------------CACCTTCACTCA i mm10.chr16 C 0 I 1 s canFam3.chr33 29049871 12 + 31377067 ---------------------------------------------------------TGCCATGACTCC i canFam3.chr33 C 0 I 57 s dasNov3.JH569502 3872504 69 + 6579706 TGCTGTATCTCCAGGGCTCAGGACAGGATCAGGGGGAGCCTTCTGGGCCACTGACCTCACCGAGACCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401112 99 + 22200726 I e micMur3.chr1 25881315 122 - 114275543 I a score=182732.000000 s hg38.chr3_KI270779v1_alt 95243 20 + 205312 AGCACC-----------------------GGGCC-----------------------------------------A-CGCC---------------------------GCTC s panTro5.chr3 199985018 20 + 202621043 AGCACC-----------------------GGGCC-----------------------------------------A-CGCC---------------------------GCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59287 20 + 190779 AGCACC-----------------------GGGCC-----------------------------------------A-CGCC---------------------------GCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24174 20 + 106623 AGCACC-----------------------GGGCC-----------------------------------------A-CGCT---------------------------GCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744473 20 + 123690457 AGCACC-----------------------GGGTC-----------------------------------------A-CGCC---------------------------TCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433204 20 + 204787373 AGCACC-----------------------AGGCC-----------------------------------------A-CGCC---------------------------ACTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41014 20 + 192460366 AGCACC-----------------------AGGCC-----------------------------------------A-CGCC---------------------------GCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516315 20 + 19675229 AGCACC-----------------------AGGCC-----------------------------------------A-CGCC---------------------------ACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451171 20 + 16847902 AGCACC-----------------------AGGCC-----------------------------------------A-CGCC---------------------------GCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388624 20 - 91754291 AGCACC-----------------------AGGCC-----------------------------------------A-CGCC---------------------------GCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542855 47 - 1977891 AGCACC-----------------------AGGCC-----------------------------------------A-CGCCGCTCTGACTCCAGCACCAGGCCACGCGGCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424721 20 + 7796314 AGCACC-----------------------AGGCC-----------------------------------------A-CGCC---------------------------GCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901488 20 - 74750902 AGCACC-----------------------CAGCC-----------------------------------------A-CGCT---------------------------GCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433069 20 + 17725628 AGCACC-----------------------CGGCC-----------------------------------------A-CGCT---------------------------GCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395378 20 - 6778120 AGCACC-----------------------CAGCC-----------------------------------------A-CGCT---------------------------GCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49648 20 - 69927 AGCACC-----------------------CGGCC-----------------------------------------A-CGCT---------------------------GCCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7401211 20 + 22200726 AGCACC-----------------------AGGCC-----------------------------------------A-CGTC---------------------------GCTT i proCoq1.NW_012133858v1 I 99 C 0 s otoGar3.GL873829 397200 44 - 608964 GGAACCCTTCCAGATCACTGACCTCACTGAGACC-----------------------------------------ACCTTT---------------------------GCTT i otoGar3.GL873829 I 21 C 0 s mm10.chr16 65412907 61 - 98207768 AGGGAC-----------------------AGGCCCAGCTCAGAGAGAGCTTTCCAGACCACCAACCTGATTCAGTA-TGTA---------------------------CCTC i mm10.chr16 I 1 C 0 s canFam3.chr33 29049940 20 + 31377067 TGTGCC-----------------------AAGCC-----------------------------------------A-CATG---------------------------CCTT i canFam3.chr33 I 57 C 0 s dasNov3.JH569502 3872573 20 + 6579706 AGCCCC-----------------------AGGCC-----------------------------------------A-CATC---------------------------CCTT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25881315 122 - 114275543 I a score=72094.000000 s hg38.chr3_KI270779v1_alt 95263 4 + 205312 TGGA s panTro5.chr3 199985038 4 + 202621043 TGGA i panTro5.chr3 C 0 I 94423 s panPan2.chrUn_NW_014024201v1 59307 4 + 190779 TGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24194 4 + 106623 TGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744493 4 + 123690457 TGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433224 4 + 204787373 TGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41034 4 + 192460366 TGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516335 4 + 19675229 TGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451191 4 + 16847902 TGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388644 4 - 91754291 TGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542902 4 - 1977891 TGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424741 4 + 7796314 TGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901508 4 - 74750902 CAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433089 4 + 17725628 GGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395398 4 - 6778120 CGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49668 4 - 69927 CGGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881437 4 - 114275543 TGGA i micMur3.chr1 I 122 C 0 s proCoq1.NW_012133858v1 7401231 4 + 22200726 TGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397244 4 - 608964 TGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412968 4 - 98207768 TAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29049960 4 + 31377067 TGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872593 4 + 6579706 TGGA i dasNov3.JH569502 C 0 C 0 a score=617714.000000 s hg38.chr3_KI270779v1_alt 95267 47 + 205312 AACTCAAACGCTGAGCGCTGAGACCTCTTCTAGGGCCTCAACCCCAG s panTro5.chr3 200079465 46 + 202621043 AACTCAAACGCTGA-CGCTGAACCGTCTTCTAGGGCCTCAACCCCAG i panTro5.chr3 I 94423 T 94422 s panPan2.chrUn_NW_014024201v1 59311 47 + 190779 AACTCAAACGCTGAGCGCTGAGATCTCTTCTAGGGCCTCAACCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24198 47 + 106623 AACTCAAACGCTGAGCACTGAGACCTCTTCTAGGGCCTCAACCCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744497 47 + 123690457 AACTCAAACGCTGAGTGCCGAGACCTCTTCTAGGGCCGCAACCCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433228 47 + 204787373 AACTCGAACTCTGAGTGCCGAGACCTCCTGTAGGTCCTTAACCCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41038 47 + 192460366 AACTCGAACTCTGAGTACTGAGACCTCCTGTAGGTCCTTAACCCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516339 47 + 19675229 AACTCGAACTCTGAGTGCCGAGACCTCCTGTAGGTCCTTAACCCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451195 47 + 16847902 AACTCGAACTCTGAGTGCTGAGACCTCCTGTAGGTCCTCAACCCCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388648 47 - 91754291 AACTCAAACTCTGAGTGCTGAGACCTCCTGTAGGTCCTCAACCCCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542906 47 - 1977891 AACTCGAACTCTGAGTGCTGAGACCTCCTGTAGGTCCTCAACCCCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424745 47 + 7796314 AACTCGAACTCTGAGTGCTGAGAGCTCCTGTAGGTCCTCAACCCCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901512 47 - 74750902 ATCTCAAACGCGGAGCCCCCAGACCTCTTCAAGGACCTCAGACCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433093 47 + 17725628 AACTCACACGTTGAGCACTGAGACCTCTTCTAGGACCTCAGTCCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395402 47 - 6778120 AACTCACACAATGAGCACTGAGACCTCTTCTAGGACCTCAGTCCCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49672 47 - 69927 GACTCAAACGCTGAGCACTGAGACCTCTCCTGGGACCTCAGTCCCAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881441 47 - 114275543 AACTCAAACTATGAGCACTGAGACCTTTTCTAGGCTCTTAATCCCAG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7401235 47 + 22200726 AACTCAAACTATGAGCATCGAGACCTTTTCTAATCTCTTAATCCCAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397248 47 - 608964 AACTCAAACTCCGAACACCAAGACTTTTTCTACGATCTTAATCCCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65412972 47 - 98207768 CACGCAAACTCTCAGCACTGAATCTGCTTCTAATGCTTTAAGTGCAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29049964 47 + 31377067 AACTCAAACCCTGAGCCCCCAGACGTTTGATTGGACCTTAATCCTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872597 47 + 6579706 AACTCAAACCCTGAGCAATGAGACCGCTACTCGGACCTTACCCCTAA i dasNov3.JH569502 C 0 C 0 a score=354766.000000 s hg38.chr3_KI270779v1_alt 95314 47 + 205312 CCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCC s panTro5.chr3 199985089 47 + 202621043 CCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCC i panTro5.chr3 T 94422 I 94423 s panPan2.chrUn_NW_014024201v1 59358 47 + 190779 TCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24245 47 + 106623 CCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744544 47 + 123690457 CCGGCCCCATTCCAGAAGCAGAGCCCAGGGGAGCCAAGGGGATTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433275 18 + 204787373 CCGGCCCCATTCCAGAAG----------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41085 18 + 192460366 CCGGCCCCATTCCAGAAG----------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516386 18 + 19675229 CCGGCCCCATTCCAGAAG----------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451242 18 + 16847902 CCGGCCCCATTCCAGAAG----------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388695 18 - 91754291 CCGGCCCCATTCCAGAAG----------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542953 18 - 1977891 CCGGCCCCATTCCAGAAG----------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424792 47 + 7796314 CCGGCCCCACTCCAGAGGCAGAGACCCGGGGAACCGAGAGCATCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901559 47 - 74750902 CCGGCCCCATTCCGGTAGCAGAGACCAGGGGAATCGAGACCATTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433140 47 + 17725628 CTGGCCCCATTCCAGTAGCAGAGACCAGGGCAATCAAGACCATTTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395449 47 - 6778120 CCAGCCCCATTCCAGTAGCAGAGACCAGGGGAATCAAGACCATTTCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49719 47 - 69927 CCAGTCCCATTCCAGTAGCAGACACCAGGGGAATCAAGACCACTTCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881488 47 - 114275543 CCAGCACCGTTCCAGAAGCAGAGACCAGGGAAGCCGGGACTGTTTCC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7401282 47 + 22200726 CCAGCACCATTCTCGAAGAAGAGACCAGGGAAACCGAGACTGTTTCC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397295 47 - 608964 ACAGCATCATTCCAGAAGCAGGGACCAGGGAAATCAAGACTGTTTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413019 47 - 98207768 CTAGTATCAGTTCAGAGGTCAATTCCAGAGACACTCAGACCACCTCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29050011 47 + 31377067 CCAACAGCAATTCAGAAGCAGAGACCAGGGACACCAAAACCACTTTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872644 47 + 6579706 GCAGCACTGTTTCAGAAGCAGAGACCATGAAAACCAAGCCCATTTCC i dasNov3.JH569502 C 0 C 0 a score=252425.000000 s hg38.chr3_KI270779v1_alt 95361 19 + 205312 CCTGCAAGAGAG-ACCAGGA s panTro5.chr3 200079559 20 + 202621043 CCTGCAAGAGAGGACCAGGA i panTro5.chr3 I 94423 C 0 s panPan2.chrUn_NW_014024201v1 59405 19 + 190779 CCTGCAAGAGAG-ACCAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24292 19 + 106623 CCTGCAAGAGAG-ACCAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744591 19 + 123690457 CCTGCAAGAGAG-ACCAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433293 12 + 204787373 -------CAGAG-ACCAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41103 12 + 192460366 -------CAGAG-ACCAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516404 12 + 19675229 -------CAGAG-ACCAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451260 12 + 16847902 -------CAGAG-ACCAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388713 12 - 91754291 -------CAGAG-ACCAGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542971 12 - 1977891 -------CAGAG-ACCAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424839 19 + 7796314 CCTGCAACAGAG-ACCAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901606 19 - 74750902 CCTGCAACAGAG-ACCAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433187 19 + 17725628 CCTGCAACAGAG-ACCAGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395496 19 - 6778120 CCTGCAACAGGG-ACCAGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49766 19 - 69927 CCTGCGACAGAG-ACCAGGA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881535 19 - 114275543 CCTGCCACAGAG-ACCAGGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7401329 19 + 22200726 CCTGCAACAGAG-ACCAGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397342 19 - 608964 CCTACAACAGAG-ACCAGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413066 19 - 98207768 TTTGTAACAAAG-ACCAGGA i mm10.chr16 C 0 I 435 s canFam3.chr33 29050058 19 + 31377067 CCTGCAATGGAA-GGCAGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872691 19 + 6579706 CCTGCAATGGAG-ACCAGAG i dasNov3.JH569502 C 0 C 0 a score=3209436.000000 s hg38.chr3_KI270779v1_alt 95380 235 + 205312 GTTTCACAAAAA---CATCTCCCAACTTCATGGTGCTGATCGCC--ACCTCCGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCTGG-AATG----ACCACAGTTCA-GACCATCACAGGCAGTGATCCCAGGGAAGCCATC-TTTGACACCCTTTGCACCGATGACA-GC-TCTGAAGAGGCAAAGACACTCACAA-T---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT s panTro5.chr3 200079579 243 + 202621043 -TTTCACAAAA----CATCTCCCAACTTCGTGGTGCTGATCACCAAAACTCTGTGGAGAC-TC--CCGCCAGTGGCAGCCGCGA--GAGCTGGAAATGACCCACCACAGTTCACGACCATCACACGCAGTGATCCGAGGAATGCCATCTTTTGACA-CGTTTG-ACCGATGACATGCTTCTGAAGAGGCAAAGAC-CTCACCATT---------GGACAGATTGACATTGGCTATCACAGACCTCCAACAAGAAGCTAAGGGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59424 235 + 190779 GTTTCACAAAAA---CATCTCCCAACTTCGTGGTGCTGATCACC--ACCTCTGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCTGG-AATG----ACCACAGTTCA-GACCATCACAGGCAGTGATCCCGAGGAAGCCATC-TTTGACACCGTTTGCACCGATGACA-GC-TCTGAAGAGGCAAAGACACTCACAA-T---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24311 235 + 106623 GTTTCACAAAAA---CATCTCCCAACTTCATGGTGCTGATCGCC--ACCTCCGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCTGG-AATG----AGCACAGTTCA-GACCATCGCAGGCAGTGATCCCGAGAAAGCCATC-TTTGACACCCTTTGCACCAATGACA-GC-TCTGAAGAGGCAAAGACACTCACAG-T---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744610 235 + 123690457 CTTTCACAAAAA---CACCTCCCGACTTCATGGTGCTGATTGCC--ACCTCTGTGGACACATCAGCCGCCAGTGGAAGCCCCGAGAGAGGCGG-AATG----ACCACAGTTCA-GACCGTCACAGGCAGTGATCCCGAGGAAGCCATC-TTTGACACCCTTTGCACCGATGACA-GC-TCTGAAGAGGCAAAGACACTCGCAA-T---------GGACATATTGACATTGGCT----CACACCTCCA--AAGAAGCTAAGGGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433305 235 + 204787373 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCACC--ACCTCTGTGGAGACATCCGCCGCCACTGGCAACCCCGAGGGACCTGG-AATG----ACCACAGCTGA-GACCGTCACAGGCAGTGATCCCAAGGAAGCCGTC-TTTGACACCCTTCGCACCGATGATA-GC-TCTGAAGAGGCAAAGACACGCACAA-C---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41115 235 + 192460366 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCGCC--ACCTCTGCGGAGACATCCGCCGCCACTGGCAGCCCCGAGGGACCTGG-AATG----ACCACAGCTGA-GACCGTCACAGGCAGTGATCCCAAGGAAGCCGTC-TTTGACACCCTTCGCACCGATGATA-GC-TCTGAAGAGGCAAAGACACGCACAA-C---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516416 235 + 19675229 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCGCC--ACCTCTGCGGAGACATCCGCCGCCACTGGCAGCCCCGAGGGACCTGG-AATG----ACCACAGCTGA-GACCATCACAGGCAGTGATCCCAAGGAAGCCGTC-TTTGACACCCTTCGCACCGATGATA-GC-TCTGAAGAGGCAAAGACACGCACAA-C---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451272 235 + 16847902 CTTCCACAGAAA---CACCTCCCGACCGCACAGTGCTGATCGCC--ACCTCTGCGGAGACATCCGCCGCCACTGGCCGCCCCGAGGGACCTGG-AATG----ACCACAGCTGA-GACCGTCACAGGCAGTGATCCCAAGGAAGCCGTC-TTTGACACCCTTCGCACCGATGATA-GC-TCTGAAGAGGCAAAGACACGCACAA-C---------GGACATATCGACATCGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388725 235 - 91754291 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCGCC--ACCTCTGCGGGGACATCCGCCGCCACTGGCAGCCCCGAGGGACCTGG-AATG----ACCACAGCTGA-GACCGTCACAGGCAGTGATCCCAAGGAAGCCGTC-TTTGACACCCTTCGCACCGATGATA-GC-TCTGAAGAGGCAAAGACACGCACAA-T---------GGACATATTGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 542983 235 - 1977891 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCGCC--ACCTCTGCGGAGACATCTGCCGCCACTGGCCGCCCCGAGGGACCTGG-AATG----ACCACAGCTGA-GACCGTCACAGGCAGTGATCCCAAGGAAGCCGTC-TTTGACACCCTTCACACCGATGATA-GC-TCTGAAGAGGCAAAGACACGCACAA-C---------GGACATATCGACATCGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 424858 244 + 7796314 CGTCCACAGAAA---CACCTCCCAACTGCACGGTGCTGATTGCC--ACCTCTGCGGGGACATCAGCCGCCACTGGCGGCCCCGAGGGACCTGG-AACG----ACCACAATGGA-GCCCGTCACAGGCAGCGATCCCGAGGAAGCCGTC-TCTGACACCCTTCGCACCGATGATA-GC-TCTGAAGAGGCAAAGACACCGATGA-TAGCTCTGAAGAGCCAATCGACATTGGCT----CACACCTCCA--CAGAAGCTAAGGGCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901625 238 - 74750902 TCGTCACAAAAATCGTACCTCCCGACTTCGTGGTGGTCATCGCC--ACCTCCCTGGAGACGTCAGTCACCAGGGGCAGCCCCGAGGGAGCTGG-AACG----ACCACCCTTGA-GACCGTCACAGGCCGTGATCCTGAGGACATCGTC-TTTGACACCCTGTGCACCGATGACA-GC-TCTGAAGAGGCAAAGACACTCACTG-T---------TGCCCTGTTGCCGCTGGCT----CACGGCTCCG--CAGAAGCGGAGGGCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433206 235 + 17725628 TCGTCACAAAAATCATACCTCCCGACGTCGTGGTGGTGATCGCC--ACCTCCATGGGGACATCAGTCACCAGCGGCAGCCCCGCAGGAGCTGG-AACG----ACCACCCTTGA-GACCGTCACAGGCGGTGACCCTGAGGACCCCGTC-TTTGACACCCTCTGCACC---CACA-GC-TCTGAAGAGGCAGAGACACTCACTG-G---------TGCCCTGTTGCCGCTGGCT----CGCACCTCCA--CGGAAGCAGAGGGCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395515 238 - 6778120 TCGTCACAAAAATCATACCTCCCGACGTGGTGGTGGTGATCGCC--ACCTCCATGGAGACATCAGTCACCAGCGGCAGCCCCGAGGGGGCTGG-GACA----ACCACCCTTGA-GACCGTCACAGGTGGTGATCCCGAGGACCCCGTG-TTTGACACCCTTTGCACCGACGACA-GC-TCTGAAGAAGCAAAGACACTCACTG-T---------TGCCCTGTTGCCACTGGCT----CGCGCCTCCG--CAGACGCTGAGGGCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 49785 238 - 69927 TCATCACAAAAATCACACCTCCCGACTTCGTGGTGGTGATCGCC--ACCTCCATGGAGACGTCGGTCACCAGCAGCAGCCCTGAGGGAGCCGG-AGCG----ACCAGCCGTGA-GACCGTCACAGGCAGTGATCCTGAGGACACCGTC-TTTGACACCCTTTGCATCTATGACA-GC-TCTGAAGAGGCAAAGACACTCACTG-T---------TGCCCTGTTGCCGCCGGCT----CACACCTCCA--CAGAAGCTGAGGGCCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881554 238 - 114275543 GCCTCACAAAAAGAACAACTTCCAAGTTCATGGTCGTGATCTCC--ACCTGTGTGGAGACATCAGTCTTAAGTGGCAGCCCCACGGGAACTGG-GATG----ACCACAGCTGA-GACTGTCACAGGCAGTGATCCTGCAGACGCCATC-TTTCACACCCTTTGTACCGATGACA-GC-TCTGAAGAGGCAAAGAGGGTCACAG-C---------GGACGTCTTGACATCCGCT----CACACCTCCA--GAGAAGCTCAGGGCCT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7401348 238 + 22200726 CCCTCACAAAAATAATACCTCCCAAGTTCATGGTTGTGATCACC--GCCTGTATGGAGACATCAGCCTCAAGTGGCAGCCCCACGGGAACTGG-AATG----ACCACAGTTGA-GACTGTCACAGGCAGTGATCCTGTGGACACCATC-TTTCACACCCTTTGTACCGATGACA-GC-TCTGAAGAGGCAAAGAGGGTCACAA-C---------TGATGTTTTGACATCGGCC----CACAGCTCCA--GGGAAGCTGAGGGCCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397361 238 - 608964 CCATCACAAAAATAACTCCTTCCAAGTTCATGGTTGCGATCACT--GCCCCTATGGAGATGTCAGCCACAAGTGGCAGCCCTGAGGGAACTGG-GATA----ACCACAGTTCA-GAGTGTCACAGGCAGTGACCCTGTGGAAACCATC-TTTGACACCCTTTGTACCAATGACA-GC-TCTGAAGAGGCAAAGAGGGTCACCG-T---------TAACATCTTGACATTGGCT----CACACTTCCA--GAGAAGTTGAGGGCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413520 232 - 98207768 TTTCAATAAGAA---TACCTTCTGACCTCACGGTTATGCACACC--ATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCA---GAACTGG-GATG----AGCACTGTCCA-AACTGGCACAGTGTGGGACTCCATAGAAGCCGTC-TTTGACACCCTTTGTACCGATGACA-GC-TCTGAAGAGGCAAGGAAGATCACAG-T---------TGACCTCCTGACGTTGGCA----CACACCTCCA--CGGAAGTGGAGTACCT i mm10.chr16 I 435 C 0 s canFam3.chr33 29050077 238 + 31377067 CCTTCACCAAAATGACACCTTCCAAGTTCACGGTGGTGATCACC--ACTCCTATGGAGGCATCGGCCACCAGTGGCAACCCCGTGGGAACTGG-GATG----ACCACAGTTGA-GACTGTTACAGGCAGTGATCTTGCAAAATCTGTC-TTCGATGCCCTTTGTACTGATGACA-GT-TCGGAAGAGGCAAAGAGGATCACAA-T---------TGACGTCTTGACATTGGCT----CACACTTCTG--TGGAAGCTGAAGGCCT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3872710 238 + 6579706 CCCTCACAAAAACAATACCTTCCAAGTTCATGGTTGCAACCTCC--ACCCCTATGGAGACATCAGCAACAAGTGTCAGCACAGCAGTAACTGA-GACA----TCCATGTTTGA-GACTGTTACAGATAGTGATCTCACAAAAGTCATC-TTTGATGCCCTCTGTACTGAGGGCA-GC-TCTGAACAGGCCCAGATGATCAAAA-T---------TGATGTCTTGACCTTGACT----CACACCTCCA--CAGAAGCTGAAGCCCT i dasNov3.JH569502 C 0 C 0 a score=-1385.000000 s hg38.chr3_KI270779v1_alt 95615 2 + 205312 -GT s panTro5.chr3 200079822 2 + 202621043 -TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59659 2 + 190779 -GT i panPan2.chrUn_NW_014024201v1 C 0 I 56 s gorGor5.CYUI01000576v1 24546 2 + 106623 -GT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744845 2 + 123690457 -GT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 901863 2 - 74750902 -GT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433441 2 + 17725628 -GT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395753 2 - 6778120 -GT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50023 2 - 69927 -GT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25881792 2 - 114275543 -GT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7401586 2 + 22200726 -GT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397599 2 - 608964 -AC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413752 2 - 98207768 -GT i mm10.chr16 C 0 C 0 s canFam3.chr33 29050316 1 + 31377067 -G- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3872948 2 + 6579706 GG- i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 516651 0 + 19675229 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e macFas5.chr2 41350 0 + 192460366 C e rheMac8.chr2 202433540 0 + 204787373 C a score=94835.000000 s hg38.chr3_KI270779v1_alt 95617 27 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACA s panTro5.chr3 200079824 27 + 202621043 CCTCAGAGAGCAGCGCCTCTTCCGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59717 27 + 190779 CCTCAGAGAGCGGCGCCTCTTCCGAAG i panPan2.chrUn_NW_014024201v1 I 56 C 0 s gorGor5.CYUI01000576v1 24548 25 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA-- i gorGor5.CYUI01000576v1 C 0 C 0 s cebCap1.NW_016107444v1 395755 27 - 6778120 CGTCAGGGAGCAGCGCCTCTTCCCACA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25881794 27 - 114275543 CCTCAGAGAGCGGCTCCTCCTCCGACA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7401588 27 + 22200726 CCTCAGAGAGCAGCTCCTCCTCCGACA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397601 27 - 608964 CCTCAGAGAGCAGCTCCTCCTTCGACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413754 27 - 98207768 CTTCAGAGAGCAGCTCTTCCTCTGACA i mm10.chr16 C 0 C 0 s canFam3.chr33 29050317 27 + 31377067 CCTTAAAGAGCAGCGCCTTCTCCGACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872950 27 + 6579706 CCTTGGAGGGAAGTGCCTCCCCTGACA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 50025 0 - 69927 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e macFas5.chr2 41350 0 + 192460366 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744847 0 + 123690457 C a score=4012.000000 s hg38.chr3_KI270779v1_alt 95644 2 + 205312 GC s panTro5.chr3 200079851 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59744 2 + 190779 GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24573 2 + 106623 GC i gorGor5.CYUI01000576v1 C 0 C 0 s micMur3.chr1 25881821 2 - 114275543 GC i micMur3.chr1 C 0 I 252 s proCoq1.NW_012133858v1 7401615 2 + 22200726 GC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397628 2 - 608964 GC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413781 2 - 98207768 GT i mm10.chr16 C 0 C 0 s canFam3.chr33 29050344 2 + 31377067 GC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872977 2 + 6579706 TC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e macFas5.chr2 41350 0 + 192460366 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744847 0 + 123690457 C a score=21877.000000 s hg38.chr3_KI270779v1_alt 95646 18 + 205312 CCCCAT-CCAGTCATCACC s panTro5.chr3 200079853 19 + 202621043 CCCCATCCCAGTCATCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59746 18 + 190779 CCCCAT-CCAGTCATCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24575 18 + 106623 CCCCAT-CCAGTCATCACC i gorGor5.CYUI01000576v1 C 0 C 0 s proCoq1.NW_012133858v1 7401617 18 + 22200726 TCAGTT-CCAGTCATCACC i proCoq1.NW_012133858v1 C 0 I 122 s otoGar3.GL873829 397630 18 - 608964 TTGGGT-CCAATGCTCTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413783 18 - 98207768 TCAGCT-GGGGTCCTCAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29050346 18 + 31377067 TCAGTT-CTGGCCATCACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872979 18 + 6579706 CCAGTT-CCAGCCATTGCC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25881823 252 - 114275543 I e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e macFas5.chr2 41350 0 + 192460366 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744847 0 + 123690457 C a score=6708.000000 s hg38.chr3_KI270779v1_alt 95664 8 + 205312 CCGTCACG s panTro5.chr3 200079872 7 + 202621043 CTGTCAC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59764 8 + 190779 CCGTCACG i panPan2.chrUn_NW_014024201v1 C 0 T 111 s gorGor5.CYUI01000576v1 24593 8 + 106623 CCGTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s otoGar3.GL873829 397648 8 - 608964 ACCTCACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413801 8 - 98207768 AGCTCACG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050364 8 + 31377067 GCCCCACG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3872997 8 + 6579706 ACCTCACG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e macFas5.chr2 41350 0 + 192460366 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744847 0 + 123690457 C a score=3608.000000 s hg38.chr3_KI270779v1_alt 95672 2 + 205312 GG s panTro5.chr3 200079879 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 24601 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s otoGar3.GL873829 397656 2 - 608964 AG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413809 2 - 98207768 AG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050372 2 + 31377067 GG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873005 2 + 6579706 AG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e panPan2.chrUn_NW_014024201v1 59772 111 + 190779 T e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744847 0 + 123690457 C a score=15946.000000 s hg38.chr3_KI270779v1_alt 95674 12 + 205312 CCTCAGAGAGCA s panTro5.chr3 200079881 12 + 202621043 CCTCAGAAAGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59661 12 + 190779 CCTCAGAGAGCA i panPan2.chrUn_NW_014024201v1 T 111 C 0 s gorGor5.CYUI01000576v1 24603 12 + 106623 CCTCAGAGAGCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744847 12 + 123690457 CCTCAGAGAGCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41352 12 + 192460366 CCTCAGACAGCA i macFas5.chr2 C 0 C 0 s otoGar3.GL873829 397658 11 - 608964 -CCCTGGGACCA i otoGar3.GL873829 C 0 T 68 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=29460.000000 s hg38.chr3_KI270779v1_alt 95686 20 + 205312 GCGCCTCTTCCGACGGCCCC s panTro5.chr3 200079893 20 + 202621043 GCGCCTCTTCCGACGGCCCC i panTro5.chr3 C 0 T 94432 s panPan2.chrUn_NW_014024201v1 59673 20 + 190779 GCGCCTCTTCCGACGGCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24615 20 + 106623 GCGCCTCTTCCGACGGCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744859 20 + 123690457 GCGCCTCTTCCGACGGCCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41364 20 + 192460366 GCGCCTCTTCCGACGGCCCC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=22948.000000 s hg38.chr3_KI270779v1_alt 95706 18 + 205312 CATCCAGTCATCACCCCG s panTro5.chr3 199985481 18 + 202621043 CATCCAGTCATCACCCCC i panTro5.chr3 T 94432 C 0 s panPan2.chrUn_NW_014024201v1 59693 18 + 190779 CATCCAGTCATCACCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24635 18 + 106623 CATCCAGTCATCACCCCA i gorGor5.CYUI01000576v1 C 0 T 105 s nomLeu3.chr11 120744879 18 + 123690457 CATCCGGTCATCACCCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41384 18 + 192460366 CATCCAGCCATCACCCCC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=4007.000000 s hg38.chr3_KI270779v1_alt 95724 5 + 205312 TCACG s panTro5.chr3 199985499 5 + 202621043 TCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59711 5 + 190779 TCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120744897 5 + 123690457 TCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41402 5 + 192460366 TCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e gorGor5.CYUI01000576v1 24653 105 + 106623 T a score=1000.000000 s hg38.chr3_KI270779v1_alt 95729 1 + 205312 G s panTro5.chr3 199985504 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59716 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 T 56 s nomLeu3.chr11 120744902 1 + 123690457 G i nomLeu3.chr11 C 0 T 56 s macFas5.chr2 41350 1 + 192460366 G i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e gorGor5.CYUI01000576v1 24653 105 + 106623 T a score=300.000000 s hg38.chr3_KI270779v1_alt 95730 1 + 205312 G s panTro5.chr3 199985505 1 + 202621043 G i panTro5.chr3 C 0 C 0 s macFas5.chr2 41351 1 + 192460366 G i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e panPan2.chrUn_NW_014024201v1 59717 56 + 190779 T e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744903 56 + 123690457 T e gorGor5.CYUI01000576v1 24653 105 + 106623 T a score=51235.000000 s hg38.chr3_KI270779v1_alt 95731 39 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAG s panTro5.chr3 199985506 39 + 202621043 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59661 39 + 190779 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAG i panPan2.chrUn_NW_014024201v1 T 56 C 0 s gorGor5.CYUI01000576v1 24548 37 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA--GCCCCCATCCAG i gorGor5.CYUI01000576v1 T 105 C 0 s nomLeu3.chr11 120744847 39 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGG i nomLeu3.chr11 T 56 C 0 s macFas5.chr2 41352 39 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAG i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=422.000000 s hg38.chr3_KI270779v1_alt 95770 1 + 205312 T s panPan2.chrUn_NW_014024201v1 59700 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24585 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744886 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41391 1 + 192460366 C i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e panTro5.chr3 199985545 0 + 202621043 C a score=16619.000000 s hg38.chr3_KI270779v1_alt 95771 15 + 205312 CATCACCCCGTCACG s panTro5.chr3 199985545 14 + 202621043 CATCACCCC-TCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59701 15 + 190779 CATCACCCCCTCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24586 15 + 106623 CATCACCCCGTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744887 15 + 123690457 CATCACCCCCTCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41392 15 + 192460366 CATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1500.000000 s hg38.chr3_KI270779v1_alt 95786 1 + 205312 G s panTro5.chr3 199985559 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59716 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 T 56 s gorGor5.CYUI01000576v1 24601 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744902 1 + 123690457 G i nomLeu3.chr11 C 0 T 56 s macFas5.chr2 41350 1 + 192460366 G i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=600.000000 s hg38.chr3_KI270779v1_alt 95787 1 + 205312 G s panTro5.chr3 199985560 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 24602 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 T 55 s macFas5.chr2 41351 1 + 192460366 G i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e panPan2.chrUn_NW_014024201v1 59717 56 + 190779 T e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744903 56 + 123690457 T a score=46333.000000 s hg38.chr3_KI270779v1_alt 95788 40 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGT s panTro5.chr3 199985561 38 + 202621043 CCTCA-AGAGCGGCGCCTCTT-CGACGGCCCCCATCCAGT i panTro5.chr3 C 0 T 54 s panPan2.chrUn_NW_014024201v1 59661 40 + 190779 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGT i panPan2.chrUn_NW_014024201v1 T 56 C 0 s gorGor5.CYUI01000576v1 24548 38 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA--GCCCCCATCCAGT i gorGor5.CYUI01000576v1 T 55 C 0 s nomLeu3.chr11 120744847 40 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGT i nomLeu3.chr11 T 56 C 0 s macFas5.chr2 41352 40 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=16619.000000 s hg38.chr3_KI270779v1_alt 95828 15 + 205312 CATCACCCCGTCACG s panTro5.chr3 199985545 14 + 202621043 CATCACCCC-TCACG i panTro5.chr3 T 54 C 0 s panPan2.chrUn_NW_014024201v1 59701 15 + 190779 CATCACCCCCTCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24586 15 + 106623 CATCACCCCGTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744887 15 + 123690457 CATCACCCCCTCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41392 15 + 192460366 CATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1500.000000 s hg38.chr3_KI270779v1_alt 95843 1 + 205312 G s panTro5.chr3 199985559 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59716 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 T 56 s gorGor5.CYUI01000576v1 24601 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744902 1 + 123690457 G i nomLeu3.chr11 C 0 T 56 s macFas5.chr2 41350 1 + 192460366 G i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=600.000000 s hg38.chr3_KI270779v1_alt 95844 1 + 205312 G s panTro5.chr3 199985560 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 24602 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 T 55 s macFas5.chr2 41351 1 + 192460366 G i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e panPan2.chrUn_NW_014024201v1 59717 56 + 190779 T e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744903 56 + 123690457 T a score=46333.000000 s hg38.chr3_KI270779v1_alt 95845 40 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGT s panTro5.chr3 199985561 38 + 202621043 CCTCA-AGAGCGGCGCCTCTT-CGACGGCCCCCATCCAGT i panTro5.chr3 C 0 T 54 s panPan2.chrUn_NW_014024201v1 59661 40 + 190779 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGT i panPan2.chrUn_NW_014024201v1 T 56 C 0 s gorGor5.CYUI01000576v1 24548 38 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA--GCCCCCATCCAGT i gorGor5.CYUI01000576v1 T 55 C 0 s nomLeu3.chr11 120744847 40 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGT i nomLeu3.chr11 T 56 C 0 s macFas5.chr2 41352 40 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=16619.000000 s hg38.chr3_KI270779v1_alt 95885 15 + 205312 CATCACCCCGTCACG s panTro5.chr3 199985545 14 + 202621043 CATCACCCC-TCACG i panTro5.chr3 T 54 C 0 s panPan2.chrUn_NW_014024201v1 59701 15 + 190779 CATCACCCCCTCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24586 15 + 106623 CATCACCCCGTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744887 15 + 123690457 CATCACCCCCTCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41392 15 + 192460366 CATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1500.000000 s hg38.chr3_KI270779v1_alt 95900 1 + 205312 G s panTro5.chr3 199985559 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59716 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 T 56 s gorGor5.CYUI01000576v1 24601 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744902 1 + 123690457 G i nomLeu3.chr11 C 0 T 56 s macFas5.chr2 41350 1 + 192460366 G i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=600.000000 s hg38.chr3_KI270779v1_alt 95901 1 + 205312 G s panTro5.chr3 199985560 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 24602 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 T 55 s macFas5.chr2 41351 1 + 192460366 G i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e panPan2.chrUn_NW_014024201v1 59717 56 + 190779 T e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744903 56 + 123690457 T a score=46333.000000 s hg38.chr3_KI270779v1_alt 95902 40 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGT s panTro5.chr3 199985561 38 + 202621043 CCTCA-AGAGCGGCGCCTCTT-CGACGGCCCCCATCCAGT i panTro5.chr3 C 0 T 54 s panPan2.chrUn_NW_014024201v1 59661 40 + 190779 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGT i panPan2.chrUn_NW_014024201v1 T 56 C 0 s gorGor5.CYUI01000576v1 24548 38 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA--GCCCCCATCCAGT i gorGor5.CYUI01000576v1 T 55 C 0 s nomLeu3.chr11 120744847 40 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGT i nomLeu3.chr11 T 56 C 0 s macFas5.chr2 41352 40 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=16619.000000 s hg38.chr3_KI270779v1_alt 95942 15 + 205312 CATCACCCCGTCACG s panTro5.chr3 199985545 14 + 202621043 CATCACCCC-TCACG i panTro5.chr3 T 54 C 0 s panPan2.chrUn_NW_014024201v1 59701 15 + 190779 CATCACCCCCTCATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24586 15 + 106623 CATCACCCCGTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744887 15 + 123690457 CATCACCCCCTCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41392 15 + 192460366 CATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1500.000000 s hg38.chr3_KI270779v1_alt 95957 1 + 205312 G s panTro5.chr3 199985559 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59716 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 T 56 s gorGor5.CYUI01000576v1 24601 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744902 1 + 123690457 G i nomLeu3.chr11 C 0 T 56 s macFas5.chr2 41350 1 + 192460366 G i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=600.000000 s hg38.chr3_KI270779v1_alt 95958 1 + 205312 G s panTro5.chr3 199985560 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 24602 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 T 55 s macFas5.chr2 41351 1 + 192460366 G i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e panPan2.chrUn_NW_014024201v1 59717 56 + 190779 T e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e nomLeu3.chr11 120744903 56 + 123690457 T a score=61622.000000 s hg38.chr3_KI270779v1_alt 95959 55 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s panTro5.chr3 199985561 53 + 202621043 CCTCA-AGAGCGGCGCCTCTT-CGACGGCCCCCATCCAGTCATTACCCCGTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59661 54 + 190779 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCCTCAT- i panPan2.chrUn_NW_014024201v1 T 56 C 0 s gorGor5.CYUI01000576v1 24548 53 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA--GCCCCCATCCAGTCATCACCCCGTCACG i gorGor5.CYUI01000576v1 T 55 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 56 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1930.000000 s hg38.chr3_KI270779v1_alt 96014 2 + 205312 GG s panTro5.chr3 199985614 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59715 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24601 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 T 55 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=68986.000000 s hg38.chr3_KI270779v1_alt 96016 55 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s panTro5.chr3 199985616 55 + 202621043 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCAGTCATTACCCCGTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59717 55 + 190779 CCTCAGAGAGCGGCGCCTCTTCCGAAGGCCCCCATCCAGTCATCACCCCGTCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24548 53 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGA--GCCCCCATCCAGTCATCACCCCGTCACG i gorGor5.CYUI01000576v1 T 55 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1930.000000 s hg38.chr3_KI270779v1_alt 96071 2 + 205312 GG s panTro5.chr3 199985671 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59772 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24601 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=43428.000000 s hg38.chr3_KI270779v1_alt 96073 32 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCC s panTro5.chr3 199985673 32 + 202621043 CCTCAGAGAGCGGCGCCTCTTCCGATGGCCCC i panTro5.chr3 C 0 T 160 s panPan2.chrUn_NW_014024201v1 59774 32 + 190779 CCTCAGAGAGCGGCGCCTCTTCTGACGGCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24603 32 + 106623 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744847 32 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCC i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 32 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=6664.000000 s hg38.chr3_KI270779v1_alt 96105 8 + 205312 CATCCAGT s panPan2.chrUn_NW_014024201v1 59806 8 + 190779 CATCCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24635 8 + 106623 CATCCAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744879 8 + 123690457 CATCCGGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41384 8 + 192460366 CATCCAGC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e panTro5.chr3 199985705 160 + 202621043 T a score=13095.000000 s hg38.chr3_KI270779v1_alt 96113 9 + 205312 CATCACCCC s panTro5.chr3 199985545 9 + 202621043 CATCACCCC i panTro5.chr3 T 160 C 0 s panPan2.chrUn_NW_014024201v1 59814 9 + 190779 CATCACCCC i panPan2.chrUn_NW_014024201v1 C 0 T 113 s gorGor5.CYUI01000576v1 24643 9 + 106623 CATCACCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744887 9 + 123690457 CATCACCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41392 9 + 192460366 CATCACCCC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=3632.000000 s hg38.chr3_KI270779v1_alt 96122 4 + 205312 GTCA s panTro5.chr3 199985554 3 + 202621043 -TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59710 4 + 190779 CTCA i panPan2.chrUn_NW_014024201v1 T 113 C 0 s gorGor5.CYUI01000576v1 24652 4 + 106623 ATCA i gorGor5.CYUI01000576v1 C 0 T 108 s nomLeu3.chr11 120744896 4 + 123690457 CTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41401 4 + 192460366 CTCA i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=-1847.000000 s hg38.chr3_KI270779v1_alt 96126 4 + 205312 CGGG- s panTro5.chr3 199985557 4 + 202621043 CGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59714 3 + 190779 T-GG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120744900 3 + 123690457 -TGG- i nomLeu3.chr11 C 0 I 1 s macFas5.chr2 41405 4 + 192460366 -TGGT i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e gorGor5.CYUI01000576v1 24656 108 + 106623 T a score=4146.000000 s hg38.chr3_KI270779v1_alt 96130 6 + 205312 CCTCAG s panTro5.chr3 199985561 5 + 202621043 CCTCA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59717 6 + 190779 CCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24548 6 + 106623 CCTCAG i gorGor5.CYUI01000576v1 T 108 C 0 s nomLeu3.chr11 120744904 6 + 123690457 CCCCGG i nomLeu3.chr11 I 1 T 57 s macFas5.chr2 41409 6 + 192460366 CCCCGG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=56951.000000 s hg38.chr3_KI270779v1_alt 96136 49 + 205312 AGAGCAGCGCCTCTTCCGACGGCCTCCATCCAGTCATCACCCCGTCACG s panTro5.chr3 199985566 48 + 202621043 AGAGCGGCGCCTCTTC-GACGGCCCCCATCCAGTCATTACCCCGTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59723 49 + 190779 AGAGCGGCGCCTCTTCCGAAGGCCCCCATCCAGTCATCACCCCGTCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24554 47 + 106623 AGAGCAGCGCCTCTTCCGA--GCCCCCATCCAGTCATCACCCCGTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744853 49 + 123690457 AGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41358 49 + 192460366 ACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 T 57 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=1930.000000 s hg38.chr3_KI270779v1_alt 96185 2 + 205312 GG s panTro5.chr3 199985614 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59772 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 T 57 s gorGor5.CYUI01000576v1 24601 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 I 69393 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=38486.000000 s hg38.chr3_KI270779v1_alt 96187 29 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACGGC s panTro5.chr3 199985616 29 + 202621043 CCTCAGAGAGCGGCGCCTCTTCCGACGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59717 29 + 190779 CCTCAGAGAGCGGCGCCTCTTCCGAAGGC i panPan2.chrUn_NW_014024201v1 T 57 C 0 s gorGor5.CYUI01000576v1 93996 29 + 106623 CCTCAGAGAGCAGCGCCTCTTCCGATGGC i gorGor5.CYUI01000576v1 I 69393 T 69372 s nomLeu3.chr11 120744847 29 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGC i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 29 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGC i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C a score=21545.000000 s hg38.chr3_KI270779v1_alt 96216 26 + 205312 CCCCATCCAGTCATCACCCCGTCACG s panTro5.chr3 199985645 26 + 202621043 CCCCATCCAGTCATTACCCCGTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59746 26 + 190779 CCCCATCCAGTCATCACCCCGTCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120744876 26 + 123690457 CCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41381 26 + 192460366 CCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e macNem1.NW_012014355v1 516651 0 + 19675229 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e colAng1.NW_012118932v1 425102 0 + 7796314 C e manLeu1.NW_012102020v1 543218 0 - 1977891 C e chlSab2.chr15 388960 0 - 91754291 C e cerAty1.NW_012004056v1 451507 0 + 16847902 C e rheMac8.chr2 202433540 0 + 204787373 C e gorGor5.CYUI01000576v1 94025 69372 + 106623 T a score=8860.000000 s hg38.chr3_KI270779v1_alt 96242 2 + 205312 GG s panTro5.chr3 199985671 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59772 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s rheMac8.chr2 202433540 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s macNem1.NW_012014355v1 516651 2 + 19675229 GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451507 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388960 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543218 2 - 1977891 GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425102 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397669 68 - 608964 T e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e aotNan1.NW_018503669v1 50025 0 - 69927 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e calJac3.chr17 901865 0 - 74750902 C e saiBol1.JH378146 433443 0 + 17725628 C e gorGor5.CYUI01000576v1 94025 69372 + 106623 T a score=218069.000000 s hg38.chr3_KI270779v1_alt 96244 27 + 205312 CCTCAGAGAGCAGCGCCTCTTCCGACG s panTro5.chr3 199985673 27 + 202621043 CCTCAGAGAGCGGCGCCTCTTCCGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59774 27 + 190779 CCTCAGAGAGCGGCGCCTCTTCTGACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120744847 27 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACG i nomLeu3.chr11 T 57 C 0 s rheMac8.chr2 202433542 27 + 204787373 CCTCAGACAGCAGCGCCTCTTCCGACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41352 27 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516653 27 + 19675229 CCTCAGACAGCAGCGCCTCTTCCGACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451509 27 + 16847902 CCTCAGACAGCAGCGCCTCTTCCGACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388962 27 - 91754291 CCTCAGACAGCAGCACCTCTTCCGACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543220 27 - 1977891 CCTCAGACAGCAGCGCCTCTTCCGACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425104 27 + 7796314 CCTCAGACAGCAGCGCCTCTTCCGACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901865 27 - 74750902 CCTCAGGGAGCAGCGCTTCTTCCCACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433443 27 + 17725628 CCTCGGGGAGCAGAGCCTCTTCCCACG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 50025 27 - 69927 CCTCAGGGAGCAGCGCCTCGTCCCACC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397601 27 - 608964 CCTCAGAGAGCAGCTCCTCCTTCGACA i otoGar3.GL873829 T 68 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e cebCap1.NW_016107444v1 395782 0 - 6778120 C e gorGor5.CYUI01000576v1 94025 69372 + 106623 T a score=190620.000000 s hg38.chr3_KI270779v1_alt 96271 23 + 205312 GCCCCCATCCAGTCATCACCCCC s panTro5.chr3 199985700 23 + 202621043 GCCCCCATCCAGTCATCACCCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59801 23 + 190779 GCCCCCATCCAGTCATCACCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120744874 23 + 123690457 GCCCCCATCCGGTCATCACCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433569 23 + 204787373 GCCCCCATCCAGCCATCACCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41379 23 + 192460366 GCCCCCATCCAGCCATCACCCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516680 23 + 19675229 GCCCCCATCCAGCCATCACCCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451536 23 + 16847902 GCCCCCATCCAGCCATCACCCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 388989 23 - 91754291 GCCCCCATCCAGCCATCACCCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543247 23 - 1977891 GCCCCCATCCAGCCATCACCCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425131 23 + 7796314 GCCCCCCTCCAGCCATCACCCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901892 23 - 74750902 GCTCCCGGCCAGCCATCACCACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433470 23 + 17725628 GCTTCCCGCCAGTCATTACCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395782 23 - 6778120 GCTCCCAGCCGGTCACCACCACC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50052 23 - 69927 GCTCCCAGCCAGTCATCACCACC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397628 23 - 608964 GCTTGGGTCCAATGCTCTCCACC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C e gorGor5.CYUI01000576v1 94025 69372 + 106623 T a score=65952.000000 s hg38.chr3_KI270779v1_alt 96294 7 + 205312 TCATGGT s panTro5.chr3 199985723 7 + 202621043 TCATGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59824 7 + 190779 TCATGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24653 7 + 106623 TCATGGT i gorGor5.CYUI01000576v1 T 69372 C 0 s nomLeu3.chr11 120744897 7 + 123690457 TCATGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433592 7 + 204787373 TCATGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41402 7 + 192460366 TCATGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516703 7 + 19675229 TCATGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451559 7 + 16847902 TCATGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389012 7 - 91754291 TCATGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543270 7 - 1977891 TCATGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425154 7 + 7796314 TCACGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901915 7 - 74750902 TCATGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433493 7 + 17725628 TCACAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395805 7 - 6778120 TCATGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50075 7 - 69927 TCATGGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397651 7 - 608964 TCACAAG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e mm10.chr16 65413811 0 - 98207768 C e dasNov3.JH569502 3873007 0 + 6579706 C e canFam3.chr33 29050374 0 + 31377067 C a score=121812.000000 s hg38.chr3_KI270779v1_alt 96301 10 + 205312 CCCCGGGATC s panTro5.chr3 199985730 10 + 202621043 CCCCGGGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59831 10 + 190779 CCCTGGGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24660 10 + 106623 CCCTGGGATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744904 10 + 123690457 CCCCGGGATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433599 10 + 204787373 CCCCGGGATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41409 10 + 192460366 CCCCGGGATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516710 10 + 19675229 CCCCGGGATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451566 10 + 16847902 CCCCGGGATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389019 10 - 91754291 CCCCGGGATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543277 10 - 1977891 CCCTGGGATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425161 10 + 7796314 CCCCGGGATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901922 10 - 74750902 CCCCCGCATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433500 10 + 17725628 CCCGGGCATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395812 10 - 6778120 CCTGGGCATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50082 10 - 69927 CCCCGGCATC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397658 10 - 608964 CCCTGGGACC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65413811 10 - 98207768 TCCTGGGACC i mm10.chr16 C 0 C 0 s canFam3.chr33 29050374 10 + 31377067 CCCTCGCACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873007 10 + 6579706 CCCGGACACT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I a score=102348.000000 s hg38.chr3_KI270779v1_alt 96311 10 + 205312 TGACGTCACT s panTro5.chr3 199985740 10 + 202621043 TGATGTCACT i panTro5.chr3 C 0 I 94265 s panPan2.chrUn_NW_014024201v1 59841 10 + 190779 TGATGTCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24670 10 + 106623 TGATGTCACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744914 10 + 123690457 TGACGTCACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433609 10 + 204787373 TGACGTCGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41419 10 + 192460366 TGACGTCGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516720 10 + 19675229 TGACGTCGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451576 10 + 16847902 TGACGTCGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389029 10 - 91754291 TGACGTCACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543287 10 - 1977891 TGACGTCGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425171 10 + 7796314 TGGCGTCACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901932 10 - 74750902 TGACGTCACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433510 10 + 17725628 TGACGTCACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395822 10 - 6778120 TGACGTCACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50092 10 - 69927 CGACGTCACA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65413821 10 - 98207768 CGACAGTGCA i mm10.chr16 C 0 I 1 s canFam3.chr33 29050384 10 + 31377067 TGACAAGAGC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3873017 10 + 6579706 TGAGATCATT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397668 1 - 608964 I a score=43355.000000 s hg38.chr3_KI270779v1_alt 96321 6 + 205312 -CTCCTC s panTro5.chr3 200080015 6 + 202621043 -CTCCTC i panTro5.chr3 I 94265 C 0 s panPan2.chrUn_NW_014024201v1 59851 6 + 190779 -CTCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24680 6 + 106623 -CTCCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744924 6 + 123690457 -CTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433619 6 + 204787373 -CTCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41429 6 + 192460366 -CTCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516730 6 + 19675229 -CTCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451586 6 + 16847902 -CTCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389039 6 - 91754291 -CTCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543297 6 - 1977891 -CTCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425181 6 + 7796314 -CTCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901942 6 - 74750902 -GTCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433520 6 + 17725628 -GTCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395832 6 - 6778120 -GTCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50102 6 - 69927 -GTCCTC i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65413832 5 - 98207768 -CTCCA- i mm10.chr16 I 1 C 0 s canFam3.chr33 29050395 5 + 31377067 -CTCCG- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3873027 6 + 6579706 GCTCCA- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I e otoGar3.GL873829 397668 1 - 608964 I a score=870327.000000 s hg38.chr3_KI270779v1_alt 96327 80 + 205312 GCTGAAGCCCTGG-TG------AC------TGTCA-CAAACATCGA-GGTTATTAATTGCAGCATC-ACAGAAATAGAAACA-ACGACTTCCAGCAT s panTro5.chr3 200080021 85 + 202621043 GCTGAAGCCCTGGATG------AC------TGTCAACTCACATTGAAGGTTATCAATTGCAGCATCGACAGAATAAGAAACACATGACTTCGCGCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 59857 80 + 190779 GCTGAAGCCCTGG-TG------AC------TGTCA-CCCACATTGA-GGTTATCAATTGCAGCATC-ACAGAAATAGAAACA-ACGACTTCCAGCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24686 80 + 106623 GCTGAAGCCCTGG-TG------AC------TGTCA-CTCACATTGA-GGTTATCAATTGCAGCATC-ACAGAAATAGAAACA-ACGACTTCCAGCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120744930 80 + 123690457 GCTGAAGCCCTGG-TG------AC------CGTCA-CCCACATCGA-GGTTATCAATTGCAGCATC-ACAGAAATAGAAACA-ACGACTTCCAGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433625 80 + 204787373 ACTGAAGCCCTGG-TG------AC------CGTCA-CCCACATCGA-GGTTATCAATTGCAGCATC-ACAGAAACAGAAACA-ACGACTTCCAGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41435 80 + 192460366 ACTGAAGCCCTGG-TG------AC------CGTCA-CCCACATTGA-GGTTATCAATTGCAGCATC-ACAGAAACAGAAACA-ACGACTTCCAGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516736 80 + 19675229 ACTGAAGCCCTGG-TG------AC------CGTCA-CCCACATCGA-TGTTATCAATTGCAGCATC-ACAGAAACAGAAACA-ACGACTTCCAGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451592 80 + 16847902 ACTGAAGCCCTGG-TG------AC------CGTCA-CCTACATCGA-GGTTATCAATTGCAGCATC-ACAGAAACAGAAACA-ACGACTTCCAGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389045 80 - 91754291 ACTGAAGCCATGG-TG------AC------CGTCA-CCCACATCGA-GGTTATCAATTGCAGCATC-ACAGAAACAGAAACG-ACGACTTCCAGCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543303 80 - 1977891 GCTGAAGCCCTGG-TG------AC------CGTCA-CCCCCATCGA-GGTTATCAATTGCAGCATC-ACAGAAACAGAAACA-GGGACTTTCAGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425187 80 + 7796314 GCTGAAGCCCTGG-TG------AC------CGTCA-CCCCCGTCGA-GGTTATCAATTCCAGCATC-ACAGAAATAGAAACA-ACGACTTCCAGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 901948 80 - 74750902 ACCGAAGCGCTGG-TG------GC------TGTCA-CCCACATGGA-GGTTATCAACTGCAGCATC-CCAGAAATAGAAACA-GCCACTTCCATCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433526 80 + 17725628 ACCGAAGCGCTGG-TG------AC------CGTCA-CCCACGTGGA-GGTTGTCAACTGCAGCATC-GTGGAAATAGAAACA-GCCACTGCCATCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395838 80 - 6778120 ACTGAAGCGCTGG-TG------AC------CGTCA-CCCACATGGA-GGTTATCAACTGCAGCATC-ACAGAAATAGAAACA-GCCACTTCCATCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50108 80 - 69927 ACCGAAGCGCTGG-TG------AC------CGTCA-CCCACACGGA-GGTCATCGACTGCAGCATC-ACAGAAATAGAAACA-GCCACTCCCATCAT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 397669 83 - 608964 GCTAAAGGCTTGG-TTGCCTACAC------TATCA-CCCACATCGA-GGTTACCAACTGCACTGTT-ACAGAAATAGAAACA-ACAGACACCAT--- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65413837 80 - 98207768 GCCAAGGGGTTGG-TT------GCCTTCAACATCA-CTCATATTAA-ACTCAGCAACTGCA---TC-ACAGAAATAGAAACA-ACCATCACCAT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29050400 83 + 31377067 GCTAAGGGTTTGT-TT------GCCTACAGCATCA-CTGACATTGA-GGTTGCCAACTGCAGCATT-CTAGAAATAGAAACA-ACTGCCACCAC--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873033 77 + 6579706 GCTAAAGCTTTGG-TT------GCCTACATCATAG-CCAACATGGA-AGTTACCAATTGCAACATT-ACAGAAATG-------ACCACTATCAG--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7401635 122 + 22200726 I e micMur3.chr1 25881823 252 - 114275543 I a score=1464025.000000 s hg38.chr3_KI270779v1_alt 96407 113 + 205312 C-CCTGGGGCCTCAGACACAGATC-TCATCC-CCACGGAA-GGGGTGAAGGCCTCGTCCAC-CTCCGATC-CACCAGCTCTGCCTGACTCCA--CTGAAGCAAAACCACACATCACTGAGG s panTro5.chr3 200080106 121 + 202621043 CGCCTGGGGCCTCAGCGACAGATCCTTATCCGCCACGGAACGGGGTGAAGGCCTCGTCCACACTCCGATCGCACCAGCTCTGCCTGACTCCAAACTGATGCAAAACCACACATCACTGAGG i panTro5.chr3 C 0 T 94280 s panPan2.chrUn_NW_014024201v1 59937 112 + 190779 C-CCTGGGGCCTCAGACACAGATC-TCATCC-CCACGGAA--GGGTGAAGGCCTCGTCCAC-CTCCAATC-CACCAGCTCTGCCTGACTCCA--CTGATGCAAAACCACACATCACTGAGg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24766 111 + 106623 C-CCTGGGGCCTCAG--ACAGATC-ACATCC-CCACGGAA-GGGGTGAAGGCCTCGTCCAC-CTCTGATC-CACCAGCTCTGCCTGACTCCA--CTGATGCAAAACCACACATCACTGAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745010 113 + 123690457 C-CCTGGGGCCTCAGACACAGATC-ACATCC-CCACGGAA-GGGGTGAAGGCCTCGCCCAC-CTCCCATC-CACCAGCTCTGCCTGACTCCA--CTGACGCAAAACCACACGTCACGGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433705 113 + 204787373 C-CCTGGGGCCTCAGACACAGATC-ACATCC-CCACGGAA-GGGATGAAGGCCTCGCCCAC-CTCCAATC-CACCAGCTCTGCCTGACTCCA--CTGATGCAAAACCACACAGCACCGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41515 113 + 192460366 C-CCTGGGGCCTCAGACACAGATC-ACATCC-CCACGGAA-GGGATGAAGGCCTCGCCCAC-CTCCAATC-CACCAGCTCTGCCTGACTCCA--CTGATGCAAAACCACACAGCACTGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516816 113 + 19675229 C-CCTGGGGCCTCAGACACAGATC-ACATCC-CCACGGAA-GGGATGAAGGCCTCGCCCAC-CTCCAATC-CACCAGCTCTGCCTGACTCCA--CTGATGCAAAACCACACAGCACCGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451672 113 + 16847902 C-CCTGGGGCCTCAGACACAGATC-ACGCCC-CCACGGAA-GGGATGAAGGCCTCGCCCAC-CTCCAGTC-CACCAGCTCTGCCTGACTCCA--CTGATGCAAAACCACACAGCACCGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389125 113 - 91754291 C-CCTGGGGCCTCAGACACAGATC-ACATCC-CCACGGAA-GGGATGAAGGCCTCGCCCAC-CTCCAATC-CACCAGCTCTGCCTGACTCCA--CTGAGGCAAAACCACACAGCACCGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543383 113 - 1977891 C-CCTGGGGCCTCAGACACAGATC-ACATCC-CCACGGAA-GGGATGAAGGCCTCGCCCAC-CTCCAGTC-CACCAGCTCTGCTTGACTCCA--CTGATGCAAAACCACACAGCACCGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425267 113 + 7796314 C-CCTGGGGCCCCAGACACAGATC-ACAGCC-CCACGGAA-GGCGTGAAGGCCTCGCCCAC-CTCCAATC-CACCAGCTCTGCCTGACTCCA--CGGATGCAAAACCACACAGCACCGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 902028 113 - 74750902 C-GCTGGGGCCCGAGACACAGACC-ACATCT-CCACAGCA-GCAGTGAAGGACTCGCCCAC-CTTGCATC-CACCAGCTCTGCCCGACTCCA--CTGCCACAGAACCACACGTCACGGAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433606 113 + 17725628 C-CCCAGGGCCTCAGACATAGACC-ACAGCC-CCACAGCA-GCAGTGAAGGCCTCGCCCAC-CTCCCATC-TGCCAGCTCTGCCCGACTCCA--CTGCCACAGAACCACACGTCACGGAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 395918 113 - 6778120 C-CCTGGGGCCTCAGACACAGACC-ACGTCC-CCACAGGA-GCAGTGAGGGCCTCGCCCAC-CTCCCATC-TACCAGCTCTGCCCGACTCCA--CTGCCACAGAACCACACCTCACGGAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50188 113 - 69927 C-CCTGGGGCCTCAGACACAGACC-ACATCC-CCACAGCA-GCGGTGAAGGCCTCGCCCAC-CTCCCATC-TACCAGCTCTGCCCGACTCCA--CTGCCGCAGAACCACACGTCACGGAGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7401757 110 + 22200726 C-CCCGGGGCCTCGGACACAGATC-ACAGCC-CCAC---A-GGAGTGAAGGCCTCGTCCAC-CTCTGATA-CGTCAGCTTTGCCAGACCCCT--CTGATGTCAAATCGTACGTCACCAAGT i proCoq1.NW_012133858v1 I 122 C 0 s otoGar3.GL873829 397752 113 - 608964 C-TCTGGGACCTTAGACACAGGTC-ACAGCC-CCCCAGAA-GGGGTTAAGGCCTTGTCCCC-CTCTGCTA-TATCAGCTTTGCTAGACTCCA--CTGAGGTGAAATCATACATCACCATGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65413917 113 - 98207768 C-TCTGGGGCCCCAGGCGCGAGCC-TCAGCC-CTACAGAA-GCGACGGCAGCTTTGTTCAC-TTCTGAGA-TATTAACTTTGCCTCCACCCA--CTGAGGCAAAACCAATTTTCCCCGAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29050483 110 + 31377067 C-CTTGGGACCTTGGACATGGATC-TCAACC-CCAC---A-GGGGGAGAGGTCCTATCTCC-CCCTGTGG-TGTCAGCTTTGCTCAATTCCA--CTGAAGCAGAATCACACATCACCGAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873110 113 + 6579706 C-CCTGGGACCTCAGACACAACTC-ACAGCC-CCATAAAA-GGACTGGAGGACCTGTCTAC-CCCTGAGG-CCTTAGTTTCATCAGACTCCA--CTGAAGCCAAATCACACATCACTGAGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25881823 252 - 114275543 I a score=115822.000000 s hg38.chr3_KI270779v1_alt 96520 8 + 205312 TCACAGCC s panTro5.chr3 199985947 8 + 202621043 ccacagcc i panTro5.chr3 T 94280 C 0 s panPan2.chrUn_NW_014024201v1 60049 8 + 190779 ccacagcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24877 8 + 106623 TCACAGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745123 8 + 123690457 CCACAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433818 8 + 204787373 CCACAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41628 8 + 192460366 CCACAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516929 8 + 19675229 CCACAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451785 8 + 16847902 CCACAGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389238 8 - 91754291 CCACAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543496 8 - 1977891 CCACAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425380 8 + 7796314 CCACAGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 902141 8 - 74750902 CCACGGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 433719 8 + 17725628 CCACGGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396031 8 - 6778120 CCACGGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50301 8 - 69927 CCACGGCC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7401867 8 + 22200726 CCACAACC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397865 8 - 608964 CTACAACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414030 8 - 98207768 CCACAAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29050593 8 + 31377067 CCACACCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873223 8 + 6579706 TGACACCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25881823 252 - 114275543 I a score=980060.000000 s hg38.chr3_KI270779v1_alt 96528 63 + 205312 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAGCTGCACCTGATGCCACGGTTGGG s panTro5.chr3 199985955 60 + 202621043 tctgccaagaccctgt-cacagccggcaccacagagtcagccacacctgat-ccacagTT-GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60057 62 + 190779 tctgccaagaccctgtccacagccggcaccacagagtcagcctcaCCTGATGCCACGGTT-GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24885 60 + 106623 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAGCTGCACCTGATACCACGG---GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745131 63 + 123690457 TCTCCCGAGACCCTGTCCACAGCCGGCACCGCAGAGTCAGCTGCACCTGATGCCACGGTTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433826 63 + 204787373 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41636 63 + 192460366 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTTAACCGCACCTGATGCCACGGTTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 516937 63 + 19675229 TCTGCCGAGACCCTGTCCACAGCCAGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451793 63 + 16847902 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389246 63 - 91754291 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543504 63 - 1977891 TCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425388 63 + 7796314 TCTGCCGAGACCCTGTCCACAGCCGGCGCCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 902149 63 - 74750902 TCCGCTGAGACCCCGTCAACAGCCAGCGCCACAGAGTCAGCCACACCTGATGCCACAGTTAAG i calJac3.chr17 C 0 I 2871 s saiBol1.JH378146 433727 63 + 17725628 TCTGCTGAGACCCCGTCAACAGCCAGCGCCACAGAGTCAGCCACACCTGATGCCACAGTGAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396039 63 - 6778120 TCTGCTGAGACCCCGTCAACAGCTGGCGCCACAGAGTCAGCCACACCTGATGCCACAGTTAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50309 63 - 69927 TCTGCTGAGACCCCATCAACAGCTGGCGCCACAGAGTCAGCCACACCTGATGCCACAGTTAAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25882075 63 - 114275543 TCTGCGGGGACCTTGTCAACAGCCAGCGCCACAGAGTCGGCCGCACCTGATGCCACCATTGAG i micMur3.chr1 I 252 C 0 s proCoq1.NW_012133858v1 7401875 63 + 22200726 TCTGCTGAGACCTTGCCAACGTCCGGTGCCACAGAGTCAGCCGCACCTGATGCCACCATTGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397873 63 - 608964 TCTGCCGAGACCTTGTCAGCAGCCAGTGCCACAGAGTCAGCTGCACCTGATGCCACTGTTGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414038 54 - 98207768 TTATCTGGGATCCTGTCAACTGCTGGCACCCCGG---------CCCTTGCCACCACCCTTGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050601 63 + 31377067 TCCGCGGAGACCTTGTCAGCAGCCAGTGCCACAGAGGCAGCCACACCTGATACCACAGTTGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873231 60 + 6579706 TCTGTTGAGACCTT---AACAGCCAGCACTACAGAATCAGCCACGCCTGATACCACAATTCAG i dasNov3.JH569502 C 0 C 0 a score=196134.000000 s hg38.chr3_KI270779v1_alt 96591 14 + 205312 ACCCCACTCCCCAC s panTro5.chr3 199986015 13 + 202621043 ACCCCACT-CCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60119 13 + 190779 GACCCACT-CCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24945 14 + 106623 AACCCACTCCCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745194 14 + 123690457 ACCCCACTCCCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433889 14 + 204787373 ACCCCACTCCCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41699 14 + 192460366 ACCCCACTCCCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517000 14 + 19675229 ACCCCACTCCCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451856 14 + 16847902 ACCCCACTCCCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389309 14 - 91754291 ACCCCACTCCCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543567 14 - 1977891 ACCCCACTCCCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425451 14 + 7796314 ACCCCACTCCCCAC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 433790 14 + 17725628 ACCCCACTCCCCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396102 14 - 6778120 ACCCTACTCCCCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50372 14 - 69927 ACCCTACTCCCCAC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25882138 14 - 114275543 ACCCCGCCCCCCAC i micMur3.chr1 C 0 I 286 s proCoq1.NW_012133858v1 7401938 14 + 22200726 ACCCCACCCCCCAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397936 14 - 608964 ACCCCACCTCCCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414092 14 - 98207768 GGGACAGTCTCCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29050664 14 + 31377067 ACCCCACTAACTGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873291 14 + 6579706 ACCCTACTCACTAC i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 902212 2871 - 74750902 I a score=123305.000000 s hg38.chr3_KI270779v1_alt 96605 12 + 205312 TAAC-AGCGCCAC s panTro5.chr3 199986028 13 + 202621043 CAACAAGCACCAT i panTro5.chr3 C 0 I 94302 s panPan2.chrUn_NW_014024201v1 60132 12 + 190779 CAAC-AGCACCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24959 12 + 106623 TAAC-AGCGCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745208 12 + 123690457 CAAC-AGTGCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433903 12 + 204787373 CAAC-AGCGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41713 12 + 192460366 CAAC-AGCGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517014 12 + 19675229 CAAC-AGCGCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451870 12 + 16847902 CAAC-AGCGCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389323 12 - 91754291 CAAC-AGCGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543581 12 - 1977891 CAAC-AGCACCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425465 12 + 7796314 CAAC-AGCACCAC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 433804 12 + 17725628 CCAC-AGTTCCGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396116 12 - 6778120 CAGC-AGTGCCGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50386 12 - 69927 CAAC-AGTGCCAC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7401952 12 + 22200726 GAGT-AGCACCAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397950 12 - 608964 CAGT-GGCACCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414106 9 - 98207768 ---T-AGTGCAAT i mm10.chr16 C 0 I 3 s canFam3.chr33 29050678 12 + 31377067 CAAT-AGCCCTAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873305 12 + 6579706 CAGT-AGGTCCAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882152 286 - 114275543 I e calJac3.chr17 902212 2871 - 74750902 I a score=281493.000000 s hg38.chr3_KI270779v1_alt 96617 22 + 205312 AGAAAGAGAAGTGACAGCACCC s panTro5.chr3 200080343 22 + 202621043 AGAAAGAGAAGTGACAGCACCC i panTro5.chr3 I 94302 T 94302 s panPan2.chrUn_NW_014024201v1 60144 22 + 190779 AGAAAGAGAAGTGACAGCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24971 22 + 106623 AGAAAGAGAAGTGACAGCACCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745220 22 + 123690457 GGAAAGAGAAGTGACAGCACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433915 22 + 204787373 AGAAAGAGAAGTGACAGCACCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41725 22 + 192460366 AGAAAGAGAAGTGACAGCACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517026 22 + 19675229 AGAAAGAGAAGTGACAGCACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451882 22 + 16847902 AGAAAGAGAAGTGACAGCACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389335 22 - 91754291 AGAAAGAGAAGTGACAGCACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543593 22 - 1977891 AGAAAGAGAAGTGACAGCACCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425477 22 + 7796314 AGAAAGAGAAGTGACAGCACCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 433816 22 + 17725628 AGAAGGAGACGTGACGGCACCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396128 22 - 6778120 AGAAAGAGAAGTGACGGCACCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50398 22 - 69927 AGAAAGAGAAGTGACGACAGCC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7401964 22 + 22200726 AGAGACAGAAACAACAGCAGGC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 397962 22 - 608964 AGAAAGAGAAACAACAGTAGAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414118 22 - 98207768 AGAAAGCGAAACAGCAGTGGCC i mm10.chr16 I 3 C 0 s canFam3.chr33 29050690 22 + 31377067 AGAAGGAGAAGCAACAGCAGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873317 19 + 6579706 AGAAAAGGAAACAACAGCC--- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882152 286 - 114275543 I e calJac3.chr17 902212 2871 - 74750902 I a score=2293551.000000 s hg38.chr3_KI270779v1_alt 96639 205 + 205312 GGGGCCACGACCCTCAGTGGAGCTCTGGTCACAGTTAGCAGGAATCCCCTTGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGGTCAGCAGTGGGCAAAACAACTTCCTTTGCTGGGAGCTCTGCTTCCTCCTACAGC---CCCTCGGAAGCCGCCCTCA--- s panTro5.chr3 199986063 196 + 202621043 AGGGCCACGACCCTCAGTGGAGCTCTGGCCACAG------GGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTGAAAGTCTCAGGAGCAGCTCGG--CTCCATAGAGGCTGGGTCAGCAGTGGGCAAAACAACTTCCTTTGCTGGGAGCTCCGCTTCCTCCTACAGC---CCCTC-GAAGCCGCCCTCA--- i panTro5.chr3 T 94302 C 0 s panPan2.chrUn_NW_014024201v1 60166 198 + 190779 AGGGCCACGACCCTCAGTGGAGCTCTGGCCACAG------GGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTGAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGGTCAGCAGTGGGC-AAACAACTTCCTTTGCTGGGAGCTCTGCTTCCTCCTACAGC---CCCTCGGAAGCCGCCCTCA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 24993 205 + 106623 AGGGCCACGACCCTCAGTGGAGCTCTGGTCACAGTTAGCAGGAATCGCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTGAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGGTCAGCAGTGGGCAAAACAACTTCCTTTGCTGGGAGCTCTGCTTCCTCCTACAGC---CCCTCGGAAGCCACCCTCA--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745242 205 + 123690457 AGGGCCACAACCCTCAGTGGAGCTCTGGCCACAGTTAGCGGGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTCAGAGTCTCAGGAGCAGCCCCGGTCTCCATAGAAGCTGGGTCAGCAGTGGACAAAAGCACTTCCTTTGCTGGGAGCTCTGCTTCCTTCTACAGC---CCCTCGGAAGCCGCCCTCG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202433937 205 + 204787373 AGGGCCACGACCCTCAGTGGAACTCTGGCCACAGTTAGCGGGAGTCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTGGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC---CCCTCAAAAGCCACCATCA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41747 205 + 192460366 AGGGCCACGACCCTCAGTGGAACTCTGGCCACAGTTAGCGGGAGTCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTGGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC---CCCTCAAAAGCCACCATCA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517048 205 + 19675229 AGGGCCACGACCCTCAGTGGAACTCTGGCCACAGTTAGCGGGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTGGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC---CCCTCAAAAGCCACCATCA--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 451904 205 + 16847902 AGCGCCACGACCCTCCGTGGAACTCTGGCCACAGGTAGTGGGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTGGAGACACCAAGTTACGTCAGAGTCTCAGAAGCAGCTCTCGTCCCCACAGAGGCCGGGTCAGCAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTGCAGC---CCCTCAAAAGCCATTATCA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389357 205 - 91754291 AGGGCCACGACCCTCAGTGGAACTCTGTCCACAGGTAGCGGGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTTGAGACACCAAGTTGCGTCAAAGTCTCAGGAGCAGCTCTCGTCCCCACAGAGGCCGGGTCAGCAGTGTGCAAAACAGCTTCCTTTGCTGGGGGCTCTGCTTCCTCCTGCAGC---CCCTCAAAAACCACCATCA--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543615 205 - 1977891 AGGGCCACGACCCTCCGTGGAACTCTGGCCACAGGTAGCGGGAATCCCCTGGAAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTGGAGACACCAAGTTGCGTCAAAGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC---CCCTCAGAAGCCATTATCA--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425499 289 + 7796314 AGGGCCACGACCCTCAGTGGAACTCTGGCCACAGTCAGCAGGAATCCCCTGGAAGAAACCTCAGCCCTCTCAGTTGAGACGCCAAGTTACGTCAGCGTCTCAGGAGCAACTCTCGTCTCCACAGAGGCCGGGTCAGCAGTGACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTCAGCGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAGCAGTGGGCAGAACAGCTTCCTTTGCTGGGTGCTCTGCTTCCTCCTACAGC---ACCTCAAAAGCCACCATCA--- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 433838 205 + 17725628 AGGGCCTCGACGCTCGGTGGGACTCTGGCGACCGTCCGCGGGAGCCCCTTGGAAGAG------------------------------------------------------------------------------------CCCTCAGCCCTCTCTGCTGAGACACCTGGTTATGTCGGAGTCTCCGGGGCAGCTTCGGCGTCCACAGAGGCCGGGTCAGCCGTGGACAGAACAACATCCTTTGCTGGGGCCTCCGCTTCAGCCGACAGC---CCCTCAGCAGCAGCCACCA--- i saiBol1.JH378146 C 0 I 3 s cebCap1.NW_016107444v1 396150 205 - 6778120 AGGGCCTTGACGCTCGGGGGGACTCTGGTGACCGTCAGCGGGAACCCCTTGGAAGAG------------------------------------------------------------------------------------CCCTCAGCCCTCTCTGCTGAGACACCTAGTTATGTCAGAGGCTCCGGGGCAGCTTCGGTTTCCACAGAGGCCGGGTCAGCAGTGGACAAAACGATGTCCTTTGCTGGGGCCCCTGCTTCAGCCCATAGC---CCCTTGGCAGCAGCCACCC--- i cebCap1.NW_016107444v1 C 0 I 3 s aotNan1.NW_018503669v1 50420 205 - 69927 AGGGCCTTGACGCTCAGTGGGACTCTGGCGACAGTCAGCGGGAACCCGTTGGAAGAG------------------------------------------------------------------------------------CCCTCAGCCCTCTCTGCTGAGACGCCCAGTTACGTCAGAGTCTCCAGGGCAGCTTCGGTTTCCACAGGGGCCGGGTCAGCAGTGGACGAAACGACGTCCTTTGCTGGGGCCTCCGCTTCAGCCTACAGC---CCCTCGGAAGCAGCCACCA--- i aotNan1.NW_018503669v1 C 0 I 3 s proCoq1.NW_012133858v1 7401986 202 + 22200726 AAGGGCACTACCTTTAGTGGAACTTCAGTGACAGTCAGCATGGACCCCTCGGGAGAA------------------------------------------------------------------------------------ACCTCGGCCTTCTCTGAGGAGACACCAAGCTACATCGAAGTCTCGGGAGCAGTCACAGT---CACAGAGGCTGGGTCAACAGTGGACAAAGTGACTTCCTCTGCAGGGTCCTCAGCTGCAGTCTACAGC---CCCTCAGAAGTAGCCACCA--- i proCoq1.NW_012133858v1 C 0 I 3 s otoGar3.GL873829 397984 205 - 608964 AAAGCCACTTCCTTCACTGGAACTTTGGTGACAGGTAGCATGGACCCCTGGGGAGAA------------------------------------------------------------------------------------ACCTCAGCCCTCTCTGTGGAGACACCAAGCCACATCGAAGTCTCAGAAGCAGTCACAGTCCCCACAGAAGCTGGGTCAACGGCGGGCAAAGTCACTTCCTCTTCTGGGTCCTCAGCTTCAGTCTACAGC---CCATCAGAGGTAGCCACCA--- i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65414140 208 - 98207768 CAGACTCTTACCTCTGTTGGAACTTCGGTGACAGTTAGAAGGAACCCCCTGGAAAAC------------------------------------------------------------------------------------ACTTCAACACTCTCTATTGAGACACAAAGCCACACTGAGGTCTTGGGCACCATCACAGTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCAGCCTCCTTCGTGAGTTTCACGGCTCTCGACAGCAGCAGTCTCTCAGTGGTGGTCACCA--- i mm10.chr16 C 0 I 3 s canFam3.chr33 29050712 205 + 31377067 ACGACCACCACCCCCAGCACAACTTTGGTCTCAGTCAGCGTGAACCCCTTGGAAGAA------------------------------------------------------------------------------------GCTTCAGTCCTCTCTATTGAGACGACAAGCCACACCAAGGTCTTGGGAGCAGTGACAGTCTCCACAGAGGCTGGGTTAACAGTGGGGAAAGCGACTTCACCTGCTGGGCTCTCAACTATGGCCCACAGC---TACAGCCACATCGCCACTA--- i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3873336 208 + 6579706 AAGGCTACCACCTCCAATGGGAGTTTCATGATGATTAGCCTGCATCCCTTGGAAGAA------------------------------------------------------------------------------------TCCTCAGCTCTCTCTGTTGAGGCAGCAAACCGTGCCAAGGTCACAGGAGCAGATCCAGTCTCCACAGAGGCTGGATCAACAATAGGCAAAGCTATTTCCTCAGCTGGGTTCTCAGCTACAGTCTATGGC---CCCTCAGAAGTAGCCACCATCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882152 286 - 114275543 I e calJac3.chr17 902212 2871 - 74750902 I a score=475566.000000 s hg38.chr3_KI270779v1_alt 96844 41 + 205312 AGAACTTCACCCCTTCAGAGACACCGACCATGGACATCGCA s panTro5.chr3 199986259 39 + 202621043 AGAACTTCA-CCCTTCAGAGACACTGACCAC-GACATCGCA i panTro5.chr3 C 0 I 94348 s panPan2.chrUn_NW_014024201v1 60364 41 + 190779 AGAACTTCACCCCTTCAGAGACACTGACCACGGACATCGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25198 41 + 106623 AGAACTTCACCCCTTCAGAGACACCGACCATGGACAGCACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745447 41 + 123690457 AGAACTTCACCCCTTCAGAGACACCCACCACGGGCATCACG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434142 41 + 204787373 AGAACTTCACCCCTTCAGAGACACCGACTGCCGACGTCACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41952 41 + 192460366 AGAACTTCACCCCTTCAGAGACACCGACTGCCGACGTCACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517253 41 + 19675229 AGAACTTCACCCCTTCAGAGACACCGACTGCAGACGTCACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452109 41 + 16847902 AGAACTTCACCCCTTCAGAGACACTGACTGCAGACGTCACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389562 41 - 91754291 AGAACTTCACCCCTTCAGAGACACCGACTGCAGACGTCACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543820 41 - 1977891 AGAACTTCACCCCTTCAGAGACACCGACTGCAGACGTCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425788 41 + 7796314 AGAACTTCACCCCTTCAGAGACACCGACCACGGACATCACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905083 38 - 74750902 AGAACTTCACCCCGTCAGAGAC---CACCATGGACTTCACA i calJac3.chr17 I 2871 C 0 s saiBol1.JH378146 434046 38 + 17725628 AGAACTTCACCCCTTCAGAGGC---CACCACGGACTTCACA i saiBol1.JH378146 I 3 C 0 s cebCap1.NW_016107444v1 396358 38 - 6778120 AGAACCTCACCCCTTCGGAGAC---CACCGCGGACTTCACA i cebCap1.NW_016107444v1 I 3 C 0 s aotNan1.NW_018503669v1 50628 38 - 69927 AGAACTTCACCCCTTCGGAGAC---CACCACGGACTTCAGA i aotNan1.NW_018503669v1 I 3 C 0 s proCoq1.NW_012133858v1 7402191 41 + 22200726 AGAAGTCTACCCCGGCAGAGACGTCTGCCACAGACAGTACA i proCoq1.NW_012133858v1 I 3 C 0 s otoGar3.GL873829 398192 41 - 608964 AGAGTTCCACTCCTGCAGAGACGCCTGCCGGAGATGGTACA i otoGar3.GL873829 I 3 C 0 s mm10.chr16 65414351 41 - 98207768 AGAGCTCTGCTACCTCAGAGACTTTAACCACAGGCAATACA i mm10.chr16 I 3 C 0 s canFam3.chr33 29050920 41 + 31377067 AGAGCACCACCCCCTCACAGCCTTCTACCGCGGATGGCACA i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3873544 41 + 6579706 AGAACTCCACCCCTCCAGAGCCTTTTACCACAGACAGCACA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882152 286 - 114275543 I a score=84052.000000 s hg38.chr3_KI270779v1_alt 96885 6 + 205312 ACCAAG s panTro5.chr3 200080646 6 + 202621043 ACCAAG i panTro5.chr3 I 94348 C 0 s panPan2.chrUn_NW_014024201v1 60405 6 + 190779 ACCAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25239 6 + 106623 ACCAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745488 6 + 123690457 ACCAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434183 6 + 204787373 ACCAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41993 6 + 192460366 ACCAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517294 6 + 19675229 ACCAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452150 6 + 16847902 ACCAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389603 6 - 91754291 ACCAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543861 6 - 1977891 ACCAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425829 6 + 7796314 ACCAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905121 6 - 74750902 GCCAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434084 6 + 17725628 GCCACG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396396 6 - 6778120 GCCACG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50666 6 - 69927 GCCAAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402232 6 + 22200726 ACCAAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 398233 6 - 608964 ACCAAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414392 6 - 98207768 ACCAAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29050961 6 + 31377067 ACCAAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873585 6 + 6579706 ACCAAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882152 286 - 114275543 I a score=993069.000000 s hg38.chr3_KI270779v1_alt 96891 62 + 205312 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAACCAACAGCAG s panTro5.chr3 200080652 60 + 202621043 GG-GCCCTTCCC----------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGT--CTCCGACTGACAACCAACAGCAG i panTro5.chr3 C 0 T 94346 s panPan2.chrUn_NW_014024201v1 60411 62 + 190779 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAACCAACAGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25245 62 + 106623 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAACCAACAGCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745494 101 + 123690457 GG-GCCCTTCCCCACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACTACAACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAACCAGCAGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434189 62 + 204787373 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 41999 62 + 192460366 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517300 62 + 19675229 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCTTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452156 62 + 16847902 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCGTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389609 62 - 91754291 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543867 62 - 1977891 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCGTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425835 62 + 7796314 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACT-ACAGCCAACAGCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905127 63 - 74750902 GGCGCCTTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTATCCATCCGACT-ACAGCCAGCAGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434090 62 + 17725628 CG-GCCCTCCCCC---------------------------------------GGCAGCAGAGACCCTCTTCCTTCTGTCCCTCTGACT-GCAGCCGGCAGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396402 62 - 6778120 GG-GCCCTTCCCT---------------------------------------GGCAGCAGGGACCCTCTTCCTTCTGTCCATCTGACC-ACAGCCAGCAGCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50672 62 - 69927 GG-GCCCTTCCCC---------------------------------------ACCAGCAGGGACCCTCTTCCTTCTGTCCATCCGACC-ACAGCCGGCAGCAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25882438 62 - 114275543 GG-GCCCCGCCCC---------------------------------------GCCAGCAGGAGCCCTCTTCCTTCTGTCCCTCCGACT-ACAGGCAACGGCAG i micMur3.chr1 I 286 C 0 s proCoq1.NW_012133858v1 7402238 62 + 22200726 GG-GCCCTTCCCC---------------------------------------ACCAGTAGGAGCCCTCTTCCTTCTGTCCCTCCGACT-ACAGGCAATGGCAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 398239 62 - 608964 GG-GCCCCTTCCC---------------------------------------ACCAGCAGGAGCCCTCTTCCTTCTATATATCCTGCC-ACAGGTAGCAGTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414398 62 - 98207768 AG-CTCCTTCCTC---------------------------------------ACAGAGAGCCACCCTCCTTTTTCTATCTATTCAACT-ACAGCTAGCACCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050967 62 + 31377067 GA-GTCTGTCCCC---------------------------------------ATCACCAGGAGCCCCGCTCCTTCTGTCCAGCTGACC-AGGGCCAACAGCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873591 62 + 6579706 GT-ACGCCTCCCC---------------------------------------ATCAGCAGGAGCCCTCTTCCTTCTATCCATCTGACT-ACAGCCAACAGCAG i dasNov3.JH569502 C 0 C 0 a score=885740.000000 s hg38.chr3_KI270779v1_alt 96953 72 + 205312 CCGAGGGACGAACAGCACCTTAGCCAAGATCAC-AACCTCAGCGAAGACCAC---GA---------------------TGAAGCCCCC-AACAGCCAC s panTro5.chr3 199986366 73 + 202621043 CCGAGGGACGAACAGCACCTT-GCCAAGACCACAAACCTCAGCGAAGACCAC---GA---------------------TGAAGCCCCCAAACAGCCAC i panTro5.chr3 T 94346 C 0 s panPan2.chrUn_NW_014024201v1 60473 72 + 190779 CCGAGGGACGAACAGCACCTTAGCCAAGACCAC-AACCTCAGCGAAGACCAC---GA---------------------TGAAGCCCCC-AACAGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25307 72 + 106623 CCGAGGGACGAACAGCACCTTAGCCAAGACCAC-AACCTCAGCGAAGACCAC---GA---------------------TGAAGCCCCC-AACAGCCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745595 72 + 123690457 CCAAGGGACGAACAGCTCCTTAGCCAAGACCAC-GACCTCAGCGAAAACCCT---GA---------------------TGAAGCCCCC-AACAGCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434251 72 + 204787373 CCGAGGGATGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGACCCC---GA---------------------TGAAGCCCCC-AACAGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42061 72 + 192460366 CCGAGGGATGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGACCCC---GA---------------------TGAAGCCCCC-AACAGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517362 72 + 19675229 CCGAGGGATGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGACCCC---GA---------------------TGAAGCCCCC-AACAGCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452218 72 + 16847902 CCGAGGGACGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGCCCCC---GA---------------------TGAAGCCCCC-AACAGCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389671 72 - 91754291 CCGAGGGACGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGACCCC---AA---------------------TGAAGCCCCC-AACAGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 543929 72 - 1977891 CCGAGGGACGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGACCCC---GA---------------------TGAAGCCCCC-AACAGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425897 72 + 7796314 CCGAGGGACGAACAGCACCTTAGCCAAGACCAC-AGCCTCAGCGAAGACCCC---GA---------------------TGAAGCCCCC-AACAGCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905190 54 - 74750902 CCCAGGAACCAGCAGCACCTCAGCCAAGACCCC----------------------GA---------------------TGGAGCCCCT-GACAGCCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434152 54 + 17725628 CCCAGGAACCAACAGCACCTCAGCCGAGACCCC----------------------GC---------------------GGGAGCCCCT-AGCAGCCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396464 54 - 6778120 CCCGGGAACCAACAGCACCTCGGCCAAGACCCC----------------------GA---------------------TGGAGCCCCC-AACAGCCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50734 49 - 69927 CCCGGGAACCGGCAGCACCTCAGCCAAGACCCC----------------------GA---------------------CGGAGCCCCT-GACA----- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25882500 72 - 114275543 CCGAGGAACAGACACCATTGTAGCCAAGACCAC-GACCTCAGCAAAGACCTC---GG---------------------CAAAGCCCCC-GACGGCCAC i micMur3.chr1 C 0 I 72 s proCoq1.NW_012133858v1 7402300 72 + 22200726 CCAAGGAACAAACATCACCTTAGCCAACACCAC-GACCTCAGCAAAGACTGC---AA---------------------CAAAGCCCCC-AACAACCAC i proCoq1.NW_012133858v1 C 0 I 64 s otoGar3.GL873829 398301 72 - 608964 CCAAAGAACAAACATCACCTCAGCCAAGGCCAC-AACCTCAGCACAGACCAC---GG---------------------AAAAGCTCCC-AACAGCCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414460 72 - 98207768 CAAAAACCCAAACATCACCTTAACCAAGACCAC-AGCCTCACCAAAGCCCCC---GA---------------------CGCATCCTAC-AACATCTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29051029 93 + 31377067 CCAAGAGGCAAACATCACCTTATTTAGGACCAC-AGCCTTAGCAAAGACCTT---GAAGACAGCCAGCGTGGCTGGAGGGAAGACCCC-AACAGCTAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873653 75 + 6579706 CCGAGGAACAAACATCACCTCAGCAAAGACCCT-GATGGCAGCCAGCACTGCCAGAG---------------------GGAAGCCTCC-AACAGTCCT i dasNov3.JH569502 C 0 C 0 a score=117465.000000 s hg38.chr3_KI270779v1_alt 97025 14 + 205312 GCCCACG--ACTGCCC s panTro5.chr3 199986439 15 + 202621043 GCCCACGACACTG-CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60545 14 + 190779 GCCCATG--ACTGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25379 14 + 106623 GCCCACG--ACTGCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745667 14 + 123690457 GCCCACC--ACTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434323 14 + 204787373 GCCCACC--ACTGCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42133 14 + 192460366 GCCCACC--ACTGCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517434 14 + 19675229 GCCCACC--ACTGCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452290 14 + 16847902 GCCCACC--ACTGCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389743 14 - 91754291 GCCCACC--GCTGCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544001 14 - 1977891 GCCCACC--ACTGCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425969 14 + 7796314 GCCCACC--ACTGCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905244 14 - 74750902 GTCCCCC--ACTGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434206 14 + 17725628 GTCCCGC--ACCGCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396518 14 - 6778120 GTCCCCC--ACTGCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50783 4 - 69927 ------------GCTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 398373 14 - 608964 AGCTGCC--ACTGCTC i otoGar3.GL873829 C 0 M 240 s mm10.chr16 65414532 11 - 98207768 ---ATCC--ACTGCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29051122 14 + 31377067 GCCCACT--GTGGTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873728 14 + 6579706 GCACACC--ACTGCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402372 64 + 22200726 I e micMur3.chr1 25882572 72 - 114275543 I a score=472356.000000 s hg38.chr3_KI270779v1_alt 97039 42 + 205312 GGACGAGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- s panTro5.chr3 199986454 41 + 202621043 GGAC-AGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60559 42 + 190779 GGACGAGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25393 42 + 106623 GGACGAGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745681 42 + 123690457 GGACGAGGCCGACCGCAGACAGGAGTGCAGGT-AAGT--GGTTCT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434337 42 + 204787373 GGACGAGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42147 42 + 192460366 GGACGAGGCCGACCACAGGCGTGAGTGCAGGT-AAGT--GGCTCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517448 42 + 19675229 GGACGAGGCCGACCACAGGCGTGAGTGCAGGT-AAGT--GGCTCC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452304 42 + 16847902 GGACGAGGCCGACCACAGACGTGAGTGCGGGT-AAGT--GGCTCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389757 42 - 91754291 GGACGAGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544015 42 - 1977891 GGACGAGGCCGACCACAGACGTGAGTGCAGGT-AAGT--GGCTCC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 425983 43 + 7796314 AGACGAGGCCGACCACAGACGTGAGTGCAGGTAAAGT--GGCTCC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905258 42 - 74750902 GGACGGGGCAGACCACAAACGTCAGCGCAGGT-AGGT--GGCCCC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434220 42 + 17725628 CGCCGGGGCAGACCACAGACGTCAGCACAGGT-AAGT--GGCTCC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396532 42 - 6778120 GGACGGGGCAGACCACAAACGTTAGCCCAGGT-AAGT--GGCTCC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50787 42 - 69927 AGACGGGGCGGACCACAACCATTAGCGCAGGT-AAGT--GGCTCC- i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65414543 44 - 98207768 GGATAAGGAAAACCACAAAACATGATCCAGGT-AAGCAAAACTCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29051136 42 + 31377067 AGACAAGGTGGACCACAGAAGCCACTGCGGGT-AAGT--GGCTCC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873742 43 + 6579706 TGACAAGGCAGACCACAAAATTTACTACAGGT-AAGT--GGTGTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402372 64 + 22200726 I e micMur3.chr1 25882572 72 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M a score=-11544.000000 s hg38.chr3_KI270779v1_alt 97081 6 + 205312 ----TGC---TGG s panTro5.chr3 199986495 5 + 202621043 ----TGC---T-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60601 6 + 190779 ----TGC---TGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25435 6 + 106623 ----TGC---TGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745723 6 + 123690457 ----TGC---CGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434379 6 + 204787373 ----TGC---TGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42189 6 + 192460366 ----TGC---TGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517490 6 + 19675229 ----TGC---TGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452346 6 + 16847902 ----TGC---TGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389799 6 - 91754291 ----TGC---TGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544057 6 - 1977891 ----TGC---TGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426026 6 + 7796314 ----TGC---TGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434262 7 + 17725628 ----CGCA--CGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396574 7 - 6778120 ----CGCA--TGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50829 7 - 69927 ----CGCA--CGG i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65414587 5 - 98207768 -------CA-TGA i mm10.chr16 C 0 I 1 s canFam3.chr33 29051178 5 + 31377067 --------CTCGG i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3873785 6 + 6579706 CATGTG------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402372 64 + 22200726 I e micMur3.chr1 25882572 72 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M e calJac3.chr17 905300 0 - 74750902 C a score=94802.000000 s hg38.chr3_KI270779v1_alt 97087 8 + 205312 TGATCTTC s panTro5.chr3 199986500 8 + 202621043 TGATCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60607 8 + 190779 TGATCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25441 8 + 106623 TGATCTTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745729 8 + 123690457 TGATCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434385 8 + 204787373 TGATCTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42195 8 + 192460366 TGATCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517496 8 + 19675229 TGATCTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452352 8 + 16847902 TGATCTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389805 8 - 91754291 TGATCTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544063 8 - 1977891 TGATCTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426032 8 + 7796314 TGATCTTT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434269 8 + 17725628 TGATCTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396581 8 - 6778120 TGATCTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50836 8 - 69927 TGACCTTT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402436 8 + 22200726 TGATCCTT i proCoq1.NW_012133858v1 I 64 C 0 s mm10.chr16 65414593 8 - 98207768 AGATTTTT i mm10.chr16 I 1 C 0 s canFam3.chr33 29051186 7 + 31377067 TGAGCTT- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3873791 8 + 6579706 TGATCTTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882572 72 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M e calJac3.chr17 905300 0 - 74750902 C a score=394635.000000 s hg38.chr3_KI270779v1_alt 97095 32 + 205312 GGGGATTTGGGAT-GCGGAGTTTCCAGGACGTC s panTro5.chr3 199986508 31 + 202621043 -GGGATTTGGGATGGCGGAGTTTCCAGGA-ATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60615 32 + 190779 GGGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25449 32 + 106623 GGGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745737 32 + 123690457 GGGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434393 31 + 204787373 -GGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42203 31 + 192460366 -GGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517504 31 + 19675229 -GGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452360 32 + 16847902 GGGGATTTGGGAT-GCGGAGTTTCCAGGGCGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389813 32 - 91754291 GGGGATTTGGGAT-GCGGAGTTTCCAGGACGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544071 32 - 1977891 GGCGATTTGGGAT-GCGGAGTTTCCAGGACGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426040 32 + 7796314 GGGGATTTGGGAT-GCGGGGTTTCCAGGACGTC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434277 32 + 17725628 GGGGACCTGGGAT-GCGGCGTTTCCAGGACATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396589 32 - 6778120 GGGGACTTGGGCT-GCGGAGTTTCCAGGACATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50844 32 - 69927 GGGGCTTGGGGAC-GCGGAGTTTCCAGGACATC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25882644 32 - 114275543 GGGGATTTGGGAT-TTGGAGTTTCCAGGACGTC i micMur3.chr1 I 72 I 382 s proCoq1.NW_012133858v1 7402444 32 + 22200726 GGGGGTTTGGGAT-TTGGAGTTTCCAGGACGTC i proCoq1.NW_012133858v1 C 0 I 1 s mm10.chr16 65414601 14 - 98207768 GGAGATTTGGAGT-A------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29051193 32 + 31377067 GGGGATTCAGGGT-TTGGACTTGCCAGGATGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873799 31 + 6579706 AAGGATTTGAGGT--TAGAGTGTCCAGGATGTC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 398387 240 - 608964 M e calJac3.chr17 905300 0 - 74750902 C a score=20578.000000 s hg38.chr3_KI270779v1_alt 97127 2 + 205312 TC s panTro5.chr3 199986539 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60647 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25481 2 + 106623 TC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745769 2 + 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434424 2 + 204787373 TC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42234 2 + 192460366 TC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517535 2 + 19675229 TC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452392 2 + 16847902 TC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389845 2 - 91754291 TC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544103 2 - 1977891 TC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426072 2 + 7796314 TC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434309 2 + 17725628 TC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396621 2 - 6778120 TC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50876 2 - 69927 TC i aotNan1.NW_018503669v1 C 0 I 47 s canFam3.chr33 29051225 2 + 31377067 TA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873830 2 + 6579706 TT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402476 1 + 22200726 I e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M e mm10.chr16 65414615 0 - 98207768 C e calJac3.chr17 905300 0 - 74750902 C a score=20122.000000 s hg38.chr3_KI270779v1_alt 97129 4 + 205312 CGCA s panTro5.chr3 199986541 4 + 202621043 CGCA i panTro5.chr3 C 0 I 94405 s panPan2.chrUn_NW_014024201v1 60649 4 + 190779 CGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25483 4 + 106623 TGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745771 4 + 123690457 CGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434426 4 + 204787373 CGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42236 4 + 192460366 CGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517537 4 + 19675229 CGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452394 4 + 16847902 CACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389847 4 - 91754291 CGCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544105 4 - 1977891 CGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426074 4 + 7796314 TGCG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434311 4 + 17725628 CGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396623 4 - 6778120 CGAG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7402477 4 + 22200726 CATG i proCoq1.NW_012133858v1 I 1 C 0 s mm10.chr16 65414615 2 - 98207768 -GC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29051227 4 + 31377067 CGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873832 4 + 6579706 CATG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M e aotNan1.NW_018503669v1 50878 47 - 69927 I e calJac3.chr17 905300 0 - 74750902 C a score=450487.000000 s hg38.chr3_KI270779v1_alt 97133 47 + 205312 CTTGAGGAGTGGAGAGGAGGGAAGGATCTGG-A-GCCTACTCAGAGCCT s panTro5.chr3 200080950 46 + 202621043 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTACTCA-AGCCT i panTro5.chr3 I 94405 C 0 s panPan2.chrUn_NW_014024201v1 60653 47 + 190779 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTACTCAGAGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25487 47 + 106623 CTTGAGGAGTGGAGAGAAAGGAAGGATCTGG-A-GCCTACTCAGAGCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745775 47 + 123690457 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTATTCAGAGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434430 47 + 204787373 CTTGAGGAGTGGAGGGGAAGGAAGGATCTGG-A-GCCTATTCAGAGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42240 47 + 192460366 CTTGAGGAGTGGAGGGGAAGGAAGGATCTGG-A-GCCTATTCAGAGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517541 47 + 19675229 CTTGAGGAGTGGAGGGGAAGGAAGGATCTGG-A-GCCTATTCAGAGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452398 47 + 16847902 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTATTTGGAGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389851 47 - 91754291 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTATTTGGAGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544109 47 - 1977891 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTATTTGGAGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426078 47 + 7796314 CTTGAGGAGTGGAGAGGAAGGAAGGATCTGG-A-GCCTATTCGGAGCCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434315 44 + 17725628 CTTGGGGAGCGGAGAGGAAGGGAGGGTC-AG-G-GCCCATTTGGAGG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396627 44 - 6778120 CTTGGGGAGCGGAGAGGAACGGAGGGTC-GA-G-GCCTATTTGGAGT-- i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7402481 48 + 22200726 CTTAAGGAGTGGGGAGGAAGGATGGACCTGGAA-GCCTGTCCTGAGCCC i proCoq1.NW_012133858v1 C 0 I 1 s mm10.chr16 65414617 48 - 98207768 CTTAAGGAGTTGAGTTGAAAGAAGGAGCTAA-AGGCCAATATTGCACCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29051231 47 + 31377067 CTCAGGGGGTGGGGAGGGAGGAAGGATCTGG-G-GCCTATTCTGAGCCC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3873836 48 + 6579706 CTTAAGAACTACAGAGGAAGGAAGAATCCGG-GGGCCTACTCTAAGCCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M e aotNan1.NW_018503669v1 50878 47 - 69927 I e calJac3.chr17 905300 0 - 74750902 C a score=200814.000000 s hg38.chr3_KI270779v1_alt 97180 21 + 205312 -GCT-CCTGATGTTGCCTCTTCG s panTro5.chr3 200080996 22 + 202621043 -GCTGCCTGATGTTGCTCTGTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60700 21 + 190779 -GCT-CCTGATGTTGCCTCTTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25534 21 + 106623 -GCT-TCTGATGTTGCCTCTTCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745822 21 + 123690457 -GCT-CCTGATGTCGCCTCTTCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434477 21 + 204787373 -GCC-CCTGATGTTGCCGCTTCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42287 21 + 192460366 -GCC-CCTGATGTTGCCGCTTCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517588 21 + 19675229 -GCC-CCTGATGTTGCCGCTTCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452445 21 + 16847902 -GCC-CCTGATGTTGCCACTTCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389898 21 - 91754291 -GCC-CCTGATGTTGCCGCTTCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544156 21 - 1977891 -GCC-CCTGATGTTGCCGCTTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426125 21 + 7796314 -GCC-CCTGATGTTGCCACTTCG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 434359 21 + 17725628 -GCC-CCTGACGTCGCCTCTTCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396671 21 - 6778120 -GCC-CCTGACGTTGCCTCTTCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50925 21 - 69927 -GCC-CCTGACGTTGCCTCTTCG i aotNan1.NW_018503669v1 I 47 C 0 s proCoq1.NW_012133858v1 7402530 21 + 22200726 -CTC-TCTGATGCTGCCTCTTTG i proCoq1.NW_012133858v1 I 1 C 0 s mm10.chr16 65414665 16 - 98207768 -TCT-CCT-----TGGCATTTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29051279 21 + 31377067 -GTC-TCTGATGCCCCCCTTTTC i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3873884 22 + 6579706 TCTC-ACTGACATCATCTCTTTA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M e calJac3.chr17 905300 0 - 74750902 C a score=177120.000000 s hg38.chr3_KI270779v1_alt 97201 12 + 205312 TGATCTTCTAGT s panTro5.chr3 200081018 12 + 202621043 TGATCTTCTAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60721 12 + 190779 TGATCTTCTAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25555 12 + 106623 TGATCTTCTAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745843 12 + 123690457 TGATCTTCTAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434498 12 + 204787373 TGATCTTCTAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42308 12 + 192460366 TGATCTTCTAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517609 12 + 19675229 TGATCTTCTAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452466 12 + 16847902 TGATCTTCTAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389919 12 - 91754291 TGATCTTCTAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544177 12 - 1977891 TGATCTTCTAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426146 12 + 7796314 TGATCTTCTAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905300 12 - 74750902 TGGTCTTCCAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434380 12 + 17725628 TGGTCTTCCAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396692 12 - 6778120 TGGTCTTCCAGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50946 12 - 69927 TGGTTTTCCAGT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402551 12 + 22200726 TGATCTTCTAGC i proCoq1.NW_012133858v1 C 0 I 43 s mm10.chr16 65414681 12 - 98207768 TGACCTCCTGGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29051301 12 + 31377067 TGATCTTCTAGT i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3873906 12 + 6579706 TGATCTTCTAAT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M a score=484033.000000 s hg38.chr3_KI270779v1_alt 97213 52 + 205312 GGTTCTTGGCGAAATCAGGAAAAGGc----------------agatgga-gg--gttgtgtatggaaaggg s panTro5.chr3 200081030 50 + 202621043 GGTTCTTG-CGAA-TCACGAAAAGGc----------------agatggatgg--gttgtgtatggaa-ggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60733 52 + 190779 GGTTCTTGGCGAAATCAGGAAAAGGc----------------agatgga-gg--gttgtgtatggaaaggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25567 52 + 106623 GGTTCTTGGCGAAATCAGGAAAAGGc----------------agatgga-gg--gttgtgtatggaaaggg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745855 50 + 123690457 GGTTCTTGACGAAATCAGGAAAAGGC----------------AGATGGA-Gg--gttgtgtatggaa--ag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434510 52 + 204787373 GGTTCTTGGCGAAATCAGGAAAAggc----------------agatgga-gg--gttgtgtatggaaagag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42320 52 + 192460366 GGTTCTTGGCGAAATCAGGAAAAggc----------------agatgga-gg--gttgtgtatggaaagag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517621 52 + 19675229 GGTTCTTGGCGAAATCAGGAAAAGGC----------------AGATGGA-Gg--gttgtgtatggaaagag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452478 52 + 16847902 GGTTCTTGGCGAAATCAGGAAAAGGC----------------AGATGGA-Gg--gttgtgtatggaaagag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389931 52 - 91754291 GGTTCTTGGTGAAATCGGGAAAAGGc----------------agatgga-gg--gttgtgtatggaaagag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544189 52 - 1977891 GGTTCTTGGCGAAATCAGGAAAAGGC----------------AGATGGA-Gg--gttgtgtatggaaagag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426158 52 + 7796314 GGTTCTTGGCGAAATCAGGAAAAggc----------------agatgga-gg--gttgtgtatggaaagag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905312 50 - 74750902 GGTTCTTGGCTAAATCAGGAAAAggc----------------agatgga-gg-cagcgtgtggagag---c i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434392 49 + 17725628 GGTTCTTGGCGAAATCAGGAAAAggc----------------agatgga-gg--gttgtatggagag---c i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396704 51 - 6778120 GGTTCTTGGCGAAATCAGGAAAaggc----------------agatgga-gggttgtgtgtggagag---c i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 50958 49 - 69927 GGTTCTTGGCGAAATCAGGAAAaggc----------------agatgga-gg--gctgtgtatggac---c i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65414693 57 - 98207768 -----------GGGTCGGTAAAAAGCAGCTAAGATGTATATGAGATGTA-gt--gatgtgtaggtgacgtt i mm10.chr16 C 0 I 54 s canFam3.chr33 29051313 52 + 31377067 GATGCTTCCCAAAATCAGAAACAAGG----------------ACAGTTA-GG--GAGGTGTATGGAAACAC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3873918 52 + 6579706 TGTTCTTGCCAAAATCAGTAATATAC----------------AGAGTTa-gg--gtggcatatggaaagag i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 7402563 43 + 22200726 I e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M a score=88739.000000 s hg38.chr3_KI270779v1_alt 97265 7 + 205312 gtgggga s panTro5.chr3 200081080 7 + 202621043 gtgggga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60785 7 + 190779 gtgggga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25619 7 + 106623 gtgggga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745905 7 + 123690457 gtggaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434562 7 + 204787373 gtggaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42372 7 + 192460366 gtggaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517673 7 + 19675229 gtggaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452530 7 + 16847902 gtggaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389983 7 - 91754291 gtggaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544241 7 - 1977891 gtggaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426210 7 + 7796314 gtggaga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905362 7 - 74750902 gtggaga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434441 7 + 17725628 gtggaga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396755 7 - 6778120 gtggaga i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51007 7 - 69927 gtggagg i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402606 7 + 22200726 gcagggc i proCoq1.NW_012133858v1 I 43 C 0 s mm10.chr16 65414804 7 - 98207768 gtagtga i mm10.chr16 I 54 C 0 s canFam3.chr33 29051366 7 + 31377067 GTGGGGT i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3873971 7 + 6579706 gctgagc i dasNov3.JH569502 I 1 C 0 e micMur3.chr1 25882676 382 - 114275543 I e otoGar3.GL873829 398387 240 - 608964 M a score=273944.000000 s hg38.chr3_KI270779v1_alt 97272 20 + 205312 tgga-agtccggagaaatg-gt s panTro5.chr3 200081087 22 + 202621043 tggacagtccggagaaatgtgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60792 20 + 190779 tgga-agtccggagaaatg-gt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25626 20 + 106623 tgga-agtccggagaaatg-gt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745912 20 + 123690457 tgga-agtccggagaaatg-gt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434569 20 + 204787373 tgga-agtctggagaaacg-gt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42379 20 + 192460366 tgga-agtctggagaaacg-gt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517680 20 + 19675229 tgga-agtctggagaaacg-gt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452537 20 + 16847902 tgga-agtctggagaaacg-gt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 389990 20 - 91754291 tgga-agtctggaaaaatg-gt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544248 20 - 1977891 tgga-agtctggagaaacg-gt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426217 20 + 7796314 tgga-agtctggaaaaatg-gt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905369 20 - 74750902 tgga-agtctggagacatg-gt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434448 20 + 17725628 cgga-agtctggagaaacg-gt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396762 20 - 6778120 cgga-cgtctggggaaacg-gt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51014 20 - 69927 tgga-agtctggagaaatg-gt i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402613 20 + 22200726 tgga-agtctgaagaaatg-gt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 398635 18 - 608964 TGAA-AGGCTGGGGAAATG--- i otoGar3.GL873829 M 240 C 0 s mm10.chr16 65414811 20 - 98207768 tgta-tgtgtgatgtaatg-at i mm10.chr16 C 0 I 113 s canFam3.chr33 29051373 19 + 31377067 TGGA-AGTCTGGAGAAATG-T- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3873978 20 + 6579706 tgga-agtctggagaaata-gt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I a score=446338.000000 s hg38.chr3_KI270779v1_alt 97292 40 + 205312 ttgcggtc-tcggctc----------t-gcctgtaaca-acccgagtgacctt s panTro5.chr3 200081109 42 + 202621043 ttgcggtcctcggctc----------t-gcctgtaacacaaccgagtgccctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60812 40 + 190779 ttgcggtc-tcggctc----------t-gcctgtaaca-acccgagtgacctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25646 40 + 106623 ttgcggtc-ttggctc----------t-gcctgtaaca-acccgagtgacctt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745932 40 + 123690457 ttgcggtc-tcggctc----------t-gcctctaaca-acccaagtgacctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434589 40 + 204787373 tttcagtc-tcagctc----------t-gcctctaaca-acccgagtgacctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42399 40 + 192460366 tttcagtc-tcagctc----------t-gcctctaaca-acccgagtgacctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517700 40 + 19675229 tttcagtc-tcagctc----------t-gcctctaaca-acccgagtgacctt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452557 40 + 16847902 tttcagtc-tcagctc----------t-gcctctaaca-acccgagtgacctt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390010 40 - 91754291 tttcagtc-tcagctc----------t-gcctctaaca-acccgagtgacctt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544268 40 - 1977891 tttcagtc-tcaactc----------t-gcctctaaca-acccgagtgacctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426237 40 + 7796314 ttttggtc-tcagctc----------t-gcctctaaca-acccgagtgatctt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905389 40 - 74750902 ttgccatc-tcagctc----------t-gcccttaaca-gcccgagcggccct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434468 40 + 17725628 ttgccgtc-tcagttc----------t-gcctccgatg-gcccgagtggcctc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396782 40 - 6778120 ttgccacc-tcagctc----------t-gcctctcacg-gcccgagtggcctt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51034 40 - 69927 ttgccgtc-tcagctc----------t-gcctttaaca-gcccgagtggcctt i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402633 40 + 22200726 ttgagatc-ttggttt----------t-gccattaata-acctgagtgacctt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 398653 38 - 608964 -TGAGAtc-ttggctc----------t--ccattaata-acctgagtgacctc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414944 36 - 98207768 TTGAGATC-TTGGCTG----------T-GCTT----TA-ACCTGAGAGACCTT i mm10.chr16 I 113 C 0 s canFam3.chr33 29051392 41 + 31377067 TTGAGATC-CTGGTTT----------TTGCCCTTAAGT-TGTTAAGTGACCTT i canFam3.chr33 C 0 I 100 s dasNov3.JH569502 3873998 48 + 6579706 ttgagttt-t--gctcaaacttaggtt-gctcttagca-acctaagagacttt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I a score=1419905.000000 s hg38.chr3_KI270779v1_alt 97332 114 + 205312 gggc-aagtc--cctgtccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ctgtatttggagagggttggaatgggcactgaagtcctgtccagctctgaccttctgtgaAGTGCACTGTTGAG s panTro5.chr3 200081151 115 + 202621043 gtgctaagtc--cctgtccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ctgtatttggagagggttggaatgggcactgaagtcctgtccagctctgaccttctatgaAATTCACTGTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60852 114 + 190779 gggc-aagtc--cttgtccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ctgtatttggagagggttggaatgggcactgaagtcctgtccagctctgaccttctatgaAATTCACTGTTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25686 113 + 106623 gggc-aagtc--cctgtccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttctctac-ctgtatttggagagggttggaatgggcactgaagtcctgtccagctctgaccttctatgaA-TTCACTGTTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120745972 114 + 123690457 gggc-aagtc--cctgtccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ccatagttggagagggttggaatgggcactgaagtcctgtccagctctgaccttccatgaAGTGCACTGTTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434629 114 + 204787373 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42439 114 + 192460366 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517740 114 + 19675229 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452597 114 + 16847902 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390050 195 - 91754291 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gggcctcagtttccccacctgtaGTTTTTGgctctgtctctaacaacacaagtgaccttgggcaagtccctctccctctccgagcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544308 114 - 1977891 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgttcagctctgaccttctatgaAGTTCACTGTTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426277 111 + 7796314 gggc-aagtc--cctctccc----tctcc-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcgccgaagtcctgtccagctctgac---ctatgaAGTTCACTGTTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905429 114 - 74750902 gacc-aagtc--cctctccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ctgtagttggagaggcttgggatgggcactgaagtcctttccagctctgaacttctgtgaAGTTCACTGTTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434508 114 + 17725628 ggcc-aagtc--cgtctccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagtaggagaggcttgggatgggcactgaagtccttttccgctctgaacttctatgaAGTTCACTGTTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396822 114 - 6778120 ggcc-aagtc--cctctccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttcttcac-ctgtagttggagaggcttgggatgggcactgaagtcctttccagctctgaacttctatgaagttcactggtgag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51074 114 - 69927 ggcc-gagtc--cctctccc----tctct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tccctttctctac-ctgtagtcggagagacttggggtgggcactgaagtcctttccagctctgaacttctatgaAGTTCACTGTTGAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402673 113 + 22200726 aggc-aagtc--cctctccc----tctct------------------------------------------------------------------------------------------g---------------------------------------------------------------------------------gcc------------tccgtttctccac-ttgtagttggacagggtggggatgagccctgaagtcctctccagctctgaccttctatgaAGTTAACTGTTGAG i proCoq1.NW_012133858v1 C 0 I 59 s otoGar3.GL873829 398691 203 - 608964 agac-aagtc--cccctctt----cctctcgggcagtggttctcaaccttcctaatgccgtgaccctttaatacaatttctataggttgtgacccacaggctgagaacagctgctctagg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ttgtagtgggagagggtggggatgagcactgaagtcctcttcagctctgatcttttgtgaAGTTAACTGTTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65414980 115 - 98207768 GGAC-CTGCC--CCTCTCCTCTGATCTCC-----------------------------------------------------------------------------------------TG---------------------------------------------------------------------------------GCTGGTAAAAAGCAGCTAGTTTCTTCGCTTTGTGGT------------GGATGAGCGCC---ATCTTTTCCAGGTCTAA-CTTCTGTGAAGTTAACTATTGGG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3874046 115 + 6579706 ggac-aaatccacctctctc----tttct-----------------------------------------------------------------------------------------gg---------------------------------------------------------------------------------gcc------------tcagtttctccac-tggtagctggaagagattgg-atgaacactaaagtcctttctagctctggcctcctgtaaAGTTAACTGTTGAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25882676 382 - 114275543 I e canFam3.chr33 29051433 100 + 31377067 I a score=26002.000000 s hg38.chr3_KI270779v1_alt 97446 2 + 205312 CA s panTro5.chr3 200081266 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60966 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25799 2 + 106623 CA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120746086 2 + 123690457 CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434743 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42553 2 + 192460366 CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517854 2 + 19675229 CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452711 2 + 16847902 CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390245 2 - 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544422 2 - 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426388 2 + 7796314 CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905543 2 - 74750902 CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434622 2 + 17725628 CA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396936 2 - 6778120 ca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51188 2 - 69927 CA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 398894 2 - 608964 TA i otoGar3.GL873829 C 0 I 53 s mm10.chr16 65415095 2 - 98207768 CG i mm10.chr16 C 0 I 54 s dasNov3.JH569502 3874161 2 + 6579706 TA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402786 59 + 22200726 I e micMur3.chr1 25882676 382 - 114275543 I e canFam3.chr33 29051433 100 + 31377067 I a score=133527.000000 s hg38.chr3_KI270779v1_alt 97448 9 + 205312 GCTCTGGAA s panTro5.chr3 200081268 9 + 202621043 GCTCTGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60968 9 + 190779 GCTCTGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25801 9 + 106623 GCTCTGGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120746088 9 + 123690457 GCTCTGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434745 9 + 204787373 GCTCTGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42555 9 + 192460366 GCTCTGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517856 9 + 19675229 GCTCTGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452713 9 + 16847902 GCTCTGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390247 9 - 91754291 GCTCTGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544424 9 - 1977891 GCTCTGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426390 9 + 7796314 GCTCTGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905545 9 - 74750902 GCTCTGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434624 9 + 17725628 GTTCTGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396938 9 - 6778120 gctctGGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51190 9 - 69927 GCTCTGGAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25883058 9 - 114275543 GCTTTGGAA i micMur3.chr1 I 382 C 0 s otoGar3.GL873829 398949 9 - 608964 GCTCTGGAA i otoGar3.GL873829 I 53 C 0 s mm10.chr16 65415151 9 - 98207768 GCCTTGGAA i mm10.chr16 I 54 C 0 s dasNov3.JH569502 3874163 8 + 6579706 -ATCAATAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402786 59 + 22200726 I e canFam3.chr33 29051433 100 + 31377067 I a score=963358.000000 s hg38.chr3_KI270779v1_alt 97457 67 + 205312 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCAGGCAGGCATCAGGCCCAAGCTGCTGCTCTC s panTro5.chr3 200081277 67 + 202621043 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCAGACATGCATCAGGCCCAAGCTGCTGCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 60977 67 + 190779 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCAGACATGCATCAGGCCCAAGCTGCTGCTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25810 67 + 106623 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCAGGCAGGCATCAGGCCCAAGCTGCTGCTCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120746097 67 + 123690457 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCAGGCAGGCATCAGGCCCAAGCTGCTGCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434754 67 + 204787373 GCTTCTATTCCAGCTGTAGCCGCACA------------------------GAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGTTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42564 67 + 192460366 GCTTCTATTCCAGCCGTAGCCGCACA------------------------GAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGTTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517865 67 + 19675229 GCTTCTATTCCAGCTGTAGCCGCACA------------------------GAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGTTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452722 67 + 16847902 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGTTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390256 67 - 91754291 GCTTCTATTCCAGCCATAGCCGCACA------------------------GAGGAGCAGCATGCAGGCATCAGGCCCAAGCTGCTGCCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544433 67 - 1977891 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGCTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426399 67 + 7796314 GCTTCTATTCCAGCCATAGCCACACA------------------------GAGGAGCAGCATGCAGGCATCAGGCCCGAGCTGCTGCTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905554 67 - 74750902 ACTTCTATTCCAGCCGTTGCGCCACA------------------------GAGGAGCAGCACGCAGGCATCAGGCCCAAGCTGCTACTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434633 67 + 17725628 GCTTCTATTCCAGCCGCAGCCCCACA------------------------GAGGAGCAGCATGCAGGCATCAGGCCGAAGCTGCTGCTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 396947 67 - 6778120 GCTTCTATTCCAGCCGTAGCCCCACA------------------------GAGGAGCAGCACGCAGGCATCAGGCCCCAGCTGCTGCTCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51199 67 - 69927 GCTTCTATTCCAGCCGTAGCCCCACA------------------------GAGGAGCAGCATGCAGGCATCAGGCCCAAGCTGCTGCTGTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25883067 67 - 114275543 GCTTCTATTCAAGCCACAGCCACACA------------------------GAGGGGCAGCATGTGGGCGTCTGGCCCAAGTTGCGGCTCTC i micMur3.chr1 C 0 I 1703 s proCoq1.NW_012133858v1 7402845 67 + 22200726 GCTTCTATTCCAGCCACAGCCACACA------------------------GAGGGGCAGCATGTGGGCATCTGGCCCAAGTTGCGGCTCTC i proCoq1.NW_012133858v1 I 59 I 1 s otoGar3.GL873829 398958 64 - 608964 GCTTCTCTTCCCGCCATAGCCACAGA---------------------------GGCCAGCATGTGAGCATCTGGCCCAAGTTGCTGCTCTC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65415160 65 - 98207768 GCCTCTA-GCCAGCAATGCCCACACA------------------------GAAGGAAAGAATGTGCAAAT-GCGTCCAAATCGCTGCCCTG i mm10.chr16 C 0 I 3 s dasNov3.JH569502 3874171 89 + 6579706 GCATTCATTC--GGCAAGGCCCCAAATTTTATTTAAAAGACATGACCCTCGTGGGGCAGCATGTGGACATCTGGTCTGAGTTGCTGCCCTC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29051433 100 + 31377067 I a score=366256.000000 s hg38.chr3_KI270779v1_alt 97524 28 + 205312 TGACAGG---CTGGGACCCCATGAAAGTGGG s panTro5.chr3 200081344 28 + 202621043 TGACGGG---CTCGGACCCCATGAAAGTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61044 28 + 190779 TGACGGG---CTCGGACCCCATGAAAGTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25877 28 + 106623 TGACGGG---CTCGGACCCCATGAAATTGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120746164 28 + 123690457 TGATGGG---CTCGGACCCCATGAAAGTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434821 28 + 204787373 TGACAGG---CTGGGACCCCATGAAAGTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42631 28 + 192460366 TGACAGG---CTGGGACCCCATGAAAGTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517932 28 + 19675229 TGACAGG---CTGGGACCCCATGAAAGTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452789 28 + 16847902 TGATGGG---CTGGGACCCCGTGAAAGTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390323 28 - 91754291 TGACGGG---CTGGGACCCCATGAAAGTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544500 28 - 1977891 TGACGGG---CTGGGACCCCATGAAAGTGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426466 28 + 7796314 TGATGGG---CTGGGACCCCATGAAAGTGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905621 28 - 74750902 TGACAGG---CTGGGACCCCATGAAAGTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434700 28 + 17725628 TGACGGG---CTGGGACCCCATGAGAGTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397014 28 - 6778120 TGACGGG---CTGGGACCCCATGAAAGTGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51266 28 - 69927 TGACAGG---CTGGGACCCCATGAAAGTGGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7402913 26 + 22200726 CAGCC-----CTGGGACCCCATGAAAGTGGG i proCoq1.NW_012133858v1 I 1 I 1161 s otoGar3.GL873829 399023 27 - 608964 TAGTA-G---CTGAGACACCATGAAAGTGGA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65415228 24 - 98207768 GCATGTG---CAGGG----CACGCAAGTGGG i mm10.chr16 I 3 C 0 s dasNov3.JH569502 3874260 28 + 6579706 ---CAGGCAACTGGGACACCATGAAAGTGGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25883134 1703 - 114275543 I e canFam3.chr33 29051433 100 + 31377067 I a score=20564.000000 s hg38.chr3_KI270779v1_alt 97552 2 + 205312 GC s panTro5.chr3 200081372 2 + 202621043 GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61072 2 + 190779 GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25905 2 + 106623 GC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120746192 2 + 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202434849 2 + 204787373 AC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42659 2 + 192460366 AC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517960 2 + 19675229 AC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452817 2 + 16847902 GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390351 2 - 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544528 2 - 1977891 GC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426494 2 + 7796314 GC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905649 2 - 74750902 GC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434728 2 + 17725628 GC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397042 2 - 6778120 GT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51294 2 - 69927 GC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 399050 2 - 608964 AC i otoGar3.GL873829 C 0 I 679 s mm10.chr16 65415252 2 - 98207768 GC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3874288 2 + 6579706 TC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e canFam3.chr33 29051433 100 + 31377067 I a score=193650.000000 s hg38.chr3_KI270779v1_alt 97554 19 + 205312 CTGCTGGATGCATTTCCTG s panTro5.chr3 200081374 19 + 202621043 CTGCTGGATGCATTTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61074 19 + 190779 CTGCTGGATGCATTTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25907 19 + 106623 CTGCTGGATGCATTTCCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120746194 19 + 123690457 CTGCTGGATGCATTTCCTG i nomLeu3.chr11 C 0 I 87807 s rheMac8.chr2 202434851 19 + 204787373 ACGCTGGATGCATTCCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42661 19 + 192460366 ACGCTGGATGCATTCCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517962 19 + 19675229 ACGCTGGATGCATTCCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452819 19 + 16847902 ACGCTGGATGCATTTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390353 19 - 91754291 CTGCTGGATGCATTTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544530 19 - 1977891 ACGCTGGATGCATTTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426496 19 + 7796314 CCGCCGGATGCATTTCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905651 19 - 74750902 CCTCTGGATGCATTTCCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434730 19 + 17725628 CCTCTGGATTCATTTCCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397044 19 - 6778120 CCTCTGGATGCATTTCCTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51296 19 - 69927 CCTCTGGATGCATTTCCTA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65415254 19 - 98207768 TTGGTGGCCATATTTACTG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3874290 19 + 6579706 TCCCTGGATGTGCTTTCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e canFam3.chr33 29051433 100 + 31377067 I a score=309763.000000 s hg38.chr3_KI270779v1_alt 97573 29 + 205312 GGATTTATGCCATAGATAGTGACTTAAAA s panTro5.chr3 200081393 29 + 202621043 GGATTTACGCCATAGATAGTGACTTAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61093 29 + 190779 GGATTTACGCCATAGATAGTGACTTAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25926 29 + 106623 GGATTTATGCCATAGATAGTGACTTAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202434870 29 + 204787373 GGATTTATGCCATAGATAGTGACCTAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42680 29 + 192460366 GGATTTATGCCATAGATAGTGACCTAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 517981 29 + 19675229 GGATTTATGCCATAGATAGTGACCTAAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452838 29 + 16847902 GGATTTATGCCATAGATAGTGACCTAAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390372 29 - 91754291 GGATTTATGCCATAGATAGTAACTTAAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544549 29 - 1977891 GGATTTATGCCATAGATAGTGACTTAAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426515 29 + 7796314 GGATTTATGCCATACATAGTGACTTAAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905670 29 - 74750902 GGATTTATGCCATAGATAGTGACTTAAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434749 28 + 17725628 GGATTTATGCCATAGATAGCGACTTAAA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397063 29 - 6778120 GGATTTATGCCATAGATAGTGACTTAAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51315 29 - 69927 GGATTTATGCCATAGATAGTGACTTAAAA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65415273 29 - 98207768 TGTTTTACACCATAAAGAGTGATTTTAGA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3874309 29 + 6579706 GAGTTGATACCATAGATAATGACTTAAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e canFam3.chr33 29051433 100 + 31377067 I e nomLeu3.chr11 120746213 87807 + 123690457 I a score=59929.000000 s hg38.chr3_KI270779v1_alt 97602 10 + 205312 TAAATTAA------TA s panTro5.chr3 200081422 10 + 202621043 TAAATTAA------TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61122 10 + 190779 TAAATTAA------TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25955 10 + 106623 TAAATTAA------TA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202434899 16 + 204787373 TAAATGAATACAGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42709 16 + 192460366 TAAATGAATACAGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518010 16 + 19675229 TAAATGAATACAGGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452867 10 + 16847902 TAAATGAA------CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390401 10 - 91754291 TAAATGAA------TA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544578 10 - 1977891 TAAATGAA------CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426544 10 + 7796314 TAAATGAA------TA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905699 10 - 74750902 TAAATACA------TA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434777 9 + 17725628 -AAATAAA------TA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397092 10 - 6778120 TAAATAAA------TA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51344 10 - 69927 TAAATAAA------TA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65415302 10 - 98207768 CAAACCAA------CA i mm10.chr16 C 0 I 12 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e dasNov3.JH569502 3874338 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I e nomLeu3.chr11 120746213 87807 + 123690457 I a score=1402693.000000 s hg38.chr3_KI270779v1_alt 97612 189 + 205312 CAggcctggagcggtggcttatgcctgtaatcccagcactttgggaggcagaggccggcggatcacctgaggtcaggagttcgagaccaggctgaccaacatggtgaaa-ccccatctcta-ctaaaaatatgaaaattagctgggcgcagtggtgggcgcctgtaatcccagctacttgggagactgagg s panTro5.chr3 200081432 189 + 202621043 CAggccgggagcggtggcttatgcctgtaatcccagcactttgggaggcagaggcgggcagatcacctgaggtcaggagttcgagaccaggctgaccaacatggtgaaa-ccccatctcta-ctaaaaatatgaaaattagctgggcgcagtggtgggtgcctgtaatcccagctacttgggagactgagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61132 189 + 190779 CAggccgggagcggtggcttatgcctgtaatcccagcactttgggaggcagaggtgggcagatcacctgaggtcaggagttcgagaccaggctgaccaacatggtgaaa-ccccatctcta-ccaaaaatatgaaaattagctgggcgcagtggtgggtgcctgtaatcccagctacgtgggagactgagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 25965 190 + 106623 CAggctgggagcggtggcttatgcctgtaatcccagcactttgggaggcagaggcgggcggatcacctgaggtcaggagttcgagaccaggctgaccaacatggtgaaacccccatctcta-ctaaaaatatgaaaattagctgggcgcagtggtgggcgcctgtaatcccagctacttgggagactgagg i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202434915 189 + 204787373 CAggctgggagcggtggctcacgcctgtaacgccagcactttgggaggccgaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaa-ccccgtctcta-ctaaaaatttgaaaatgaaccaggcgtggtggcgcacgcctgtaataccagctactcgggaggctgagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42725 189 + 192460366 CAggccgggagcggtggctcacgcctgtaacgccagcactttgggaggccgaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaa-ccccgtctcta-ctaaaaatttgaaaatgaaccgggcgtggtggcgcacgcctgtaataccagctactcgggaggctgagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518026 189 + 19675229 CAggccgggagcggtggcttacgcctgtaacgccagcactttgggaggccgaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaa-ccccgtctcta-ctaaaaatttgaaaatgaaccgggcgtggtggcgcacgcctgtaataccagctactcgggaggctgagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 452877 189 + 16847902 CAggccgggagtggtggctcacgcctgtaacgccagcactttgggaggccgaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacacagtgaaa-ccccgtctcta-ctaaaaatttgaaaatgaaccgggtgtggtggcgcacgcctgtaataccagctacttgggaggctgagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390411 189 - 91754291 CAggccgggagcggtggctcacgcctgtaacgccagcactttgggaggtggaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaa-ccccgtctcta-ctaaaaatttgaaaatgaacggggcgtggtggtgcacgcctgtaataccagctactcaggaggctgagg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544588 189 - 1977891 CAggccgggagcggtggctcacacctgtaacgccagcactttgggaggccgaggagggtaaatcacttgaggttaggagtttaagaccggcctggccaacatagtgaaa-ccccgtctcta-ctaaaaatttgaaaatgaaccgggcgtggtggcgcacgcctgtaataccagctactcgggagactgagg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426554 189 + 7796314 CAggccgggagtggtggctcacgcctgtaacgccaggactttgggaggccgaggagggtaaatcacctgaggttaggagtgtaagaccagcctggccaacatagtgaaa-tcccgtctcta-ctaaaaatttgaaaatgaactgggtgtggtggcgcatgcctgtaatcccagctactcaggaggctgagg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905709 188 - 74750902 CGggctgggtgcggcggctcatgcctgtaatctcagcactttgggaggccgaggggggt-gaccacctaaggttaggagttcgagaccagcctggtcaacatggtgaaa-ccccgtctata-ttaaaaatacaaaaattagccaggtatagtagcacatgcctgtaattccagctactcaggaggctgagg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434786 187 + 17725628 C-ggctgggcgcggtggctcatgcctgtgatctcagcactttgggaggccgaggaggatggaccacctgaggtcaggagtttgagaccagcttggccaacatggcgaaa-cactgtctgta-ttaaaaatacgaaaattagccgggtgtagc-gtgcatgcctgtaattccagctacttaggaggctgagg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397102 157 - 6778120 C-AGCTGGGTGCGGTGGCTCATGCCTGT--------------------------------Aatcacctgaggttagtagttcgagaccagcctggtcaacatggtgaaa-ccctgtctatatttgaaaatacaaaaattagctgggtgtagtagcgcatgcctgtaattccagctactcaggaggctgagg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51354 177 - 69927 CGGGCTGGGc------------gcctgtaatctcagcactttgggaggccgaggagggtggaccacctgaggttaggagttcgagacctgcctggtcaacatggtgaaa-ccccgtctata-ttaaaaatacaaaatttagccgggtgtagaagcgcatgcctgtaattccagctactcgggacgctgagg i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e dasNov3.JH569502 3874338 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I e nomLeu3.chr11 120746213 87807 + 123690457 I a score=474071.000000 s hg38.chr3_KI270779v1_alt 97801 47 + 205312 caggagaatcacttgaacccgggaggtggaggttacagtgagctgag s panTro5.chr3 200081621 47 + 202621043 caggagaatcacttgaacccgggaggtggaggttgcagtgagctgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61321 47 + 190779 caggagaatcacttgaacccgggaggtggaggttgcagtgagctgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26155 47 + 106623 caggagaatcacttgaacccaggaggtggaggttgcagtgagctgag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834020 46 + 123690457 caggagaatcac-tgaacccgggaggtggaggttgcagtgagctgag i nomLeu3.chr11 I 87807 C 0 s rheMac8.chr2 202435104 47 + 204787373 caggagaatcgcttgaacccgggaggtggaggttgaagtgagccgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 42914 47 + 192460366 caggagaatcgcttgaacccgggaggtggaggttgaagtgagccgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518215 47 + 19675229 caggagaatcgcttgaacccgggaggtggaggttgaagtgagccgag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453066 47 + 16847902 caggagaatcacttgaacccaggaggtggaggttgaagtgagccgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390600 47 - 91754291 caggagaatcacttgaacccgggaggtggaggttgaagtgagccgag i chlSab2.chr15 C 0 I 67 s manLeu1.NW_012102020v1 544777 47 - 1977891 caggagaatagcttgaacccgggaggtggaggttgaagtgagccgag i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 426743 47 + 7796314 caggagaattgcttgaacccaggaggtggaggttgaagtgagccgag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905897 47 - 74750902 caggcgaactgcttgaacccaggaggtggaggttacagtgagctgag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 434973 47 + 17725628 caggggaatcgcttgaatccaggaggtggaggttgcagtgagctgag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397259 47 - 6778120 caggggaatcgcttgaacccaggaggtggaggttgcagtgagctgag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51531 47 - 69927 caggagaattgcttgaacccaggaggtggaggttgcggtgagctgag i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e dasNov3.JH569502 3874338 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I a score=9555.000000 s hg38.chr3_KI270779v1_alt 97848 1 + 205312 a s panTro5.chr3 200081668 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61368 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26202 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834066 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435151 1 + 204787373 a i rheMac8.chr2 C 0 I 29 s macFas5.chr2 42961 1 + 192460366 a i macFas5.chr2 C 0 I 29 s macNem1.NW_012014355v1 518262 1 + 19675229 a i macNem1.NW_012014355v1 C 0 I 29 s cerAty1.NW_012004056v1 453113 1 + 16847902 a i cerAty1.NW_012004056v1 C 0 I 66 s manLeu1.NW_012102020v1 544827 1 - 1977891 a i manLeu1.NW_012102020v1 I 3 I 26 s colAng1.NW_012118932v1 426790 1 + 7796314 a i colAng1.NW_012118932v1 C 0 I 29 s calJac3.chr17 905944 1 - 74750902 a i calJac3.chr17 C 0 I 29 s saiBol1.JH378146 435020 1 + 17725628 a i saiBol1.JH378146 C 0 I 29 s cebCap1.NW_016107444v1 397306 1 - 6778120 a i cebCap1.NW_016107444v1 C 0 I 71 s aotNan1.NW_018503669v1 51578 1 - 69927 a i aotNan1.NW_018503669v1 C 0 I 29 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e dasNov3.JH569502 3874338 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I e chlSab2.chr15 390647 67 - 91754291 I a score=116073.000000 s hg38.chr3_KI270779v1_alt 97849 19 + 205312 cggagtgaaactccgtctc s panTro5.chr3 200081669 19 + 202621043 cggagtgaaactccgtctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61369 19 + 190779 cggagtgaaactccgtctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26203 19 + 106623 cggagtgaaactccgtctc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834067 19 + 123690457 cagagtgaaactccatctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435181 19 + 204787373 gagagtgaaactccatctc i rheMac8.chr2 I 29 C 0 s macFas5.chr2 42991 19 + 192460366 gagagtgaaactccatctc i macFas5.chr2 I 29 C 0 s macNem1.NW_012014355v1 518292 19 + 19675229 gagagtgaaactccatctc i macNem1.NW_012014355v1 I 29 C 0 s manLeu1.NW_012102020v1 544854 19 - 1977891 gagagtgaaactccatctc i manLeu1.NW_012102020v1 I 26 C 0 s colAng1.NW_012118932v1 426820 19 + 7796314 gagagtgaaactccatctc i colAng1.NW_012118932v1 I 29 C 0 s calJac3.chr17 905974 19 - 74750902 aagagtgaaattccatatc i calJac3.chr17 I 29 C 0 s saiBol1.JH378146 435050 19 + 17725628 aagagtgaaactccatctc i saiBol1.JH378146 I 29 C 0 s aotNan1.NW_018503669v1 51608 19 - 69927 aagagtgagactccatctc i aotNan1.NW_018503669v1 I 29 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e dasNov3.JH569502 3874338 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I e cebCap1.NW_016107444v1 397307 71 - 6778120 I e chlSab2.chr15 390647 67 - 91754291 I e cerAty1.NW_012004056v1 453114 66 + 16847902 I a score=-15080.000000 s hg38.chr3_KI270779v1_alt 97868 19 + 205312 -aaaa-aaaaaaggtaag-----ata s panTro5.chr3 200081688 18 + 202621043 -aaaa-aaaaa-ggtaag-----ata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61388 18 + 190779 -aaaa-aaaaa-ggtaag-----ata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26222 19 + 106623 -aaaa-aaaaaaggtaag-----ata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834086 18 + 123690457 -aaaa-aaaaa-agtaag-----ata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435200 14 + 204787373 -aaaa-acaaa----caa-----ac- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43010 14 + 192460366 -aaaa-acaaa----caa-----ac- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518311 14 + 19675229 -aaaa-acaga----caa-----ac- i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 544873 14 - 1977891 -aaaa-ataaa----caa-----ac- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426839 14 + 7796314 -aaaa-ataaa----caa-----ac- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 905993 18 - 74750902 -aaaataatcataataat-----a-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435069 14 + 17725628 -a----aataataataat-----a-- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51627 22 - 69927 -aaaa-aataataataatagaaaa-- i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 3874338 18 + 6579706 AACAA-ACAAA-CATTGG-----AT- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e canFam3.chr33 29051433 100 + 31377067 I e cebCap1.NW_016107444v1 397307 71 - 6778120 I e chlSab2.chr15 390647 67 - 91754291 I e cerAty1.NW_012004056v1 453114 66 + 16847902 I a score=51383.000000 s hg38.chr3_KI270779v1_alt 97887 8 + 205312 aaataagc s panTro5.chr3 200081706 8 + 202621043 aaataaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61406 8 + 190779 aaataaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26241 4 + 106623 aaat---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834104 8 + 123690457 aaataaac i nomLeu3.chr11 C 0 I 4 s rheMac8.chr2 202435214 8 + 204787373 aaacaaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43024 8 + 192460366 aaacaaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518325 8 + 19675229 aaacaaat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453180 8 + 16847902 aaacaaat i cerAty1.NW_012004056v1 I 66 C 0 s chlSab2.chr15 390714 8 - 91754291 aaacaaat i chlSab2.chr15 I 67 C 0 s manLeu1.NW_012102020v1 544887 8 - 1977891 aaacaaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426853 8 + 7796314 aaacaaat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906011 8 - 74750902 aaacaaat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435083 8 + 17725628 aaacaaat i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51649 8 - 69927 aaacaaaT i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e dasNov3.JH569502 3874356 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I e cebCap1.NW_016107444v1 397307 71 - 6778120 I a score=9090.000000 s hg38.chr3_KI270779v1_alt 97895 1 + 205312 a s panTro5.chr3 200081714 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61414 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26245 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834116 1 + 123690457 A i nomLeu3.chr11 I 4 C 0 s rheMac8.chr2 202435222 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43032 1 + 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518333 1 + 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453188 1 + 16847902 a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390722 1 - 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544895 1 - 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426861 1 + 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906019 1 - 74750902 a i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435091 1 + 17725628 a i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397378 1 - 6778120 G i cebCap1.NW_016107444v1 I 71 C 0 s aotNan1.NW_018503669v1 51657 1 - 69927 A i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I e dasNov3.JH569502 3874356 0 + 6579706 C e canFam3.chr33 29051433 100 + 31377067 I a score=124110.000000 s hg38.chr3_KI270779v1_alt 97896 16 + 205312 aaTACAGCGAAGGCTT s panTro5.chr3 200081715 16 + 202621043 aaTACGGCAAAGGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61415 16 + 190779 aaTACGGCAAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26246 16 + 106623 aaTACGGCGAAGGCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834117 16 + 123690457 AATACGGCAAAGTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435223 16 + 204787373 aaTACAGCAAAGTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43033 16 + 192460366 aaTACAGCAAAGTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518334 16 + 19675229 aaTACAGCAAAGTCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453189 16 + 16847902 aaTACAGCAAAGGCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390723 16 - 91754291 aaTACAGCAAAGGGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544896 16 - 1977891 aaTACAGCAAAGGCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426862 16 + 7796314 aaTACAGCAAAGTCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906020 16 - 74750902 aaCGTGGTGAAGGTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435092 16 + 17725628 aaTACGGTTAAGTCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397379 16 - 6778120 AATACAGTGACGGTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51658 16 - 69927 AATACGGTGAAGGTGT i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29051533 16 + 31377067 AATGGGGTGAAGGATT i canFam3.chr33 I 100 C 0 s dasNov3.JH569502 3874356 8 + 6579706 --------GAATGTTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415312 12 - 98207768 I a score=2196855.000000 s hg38.chr3_KI270779v1_alt 97912 206 + 205312 GGGAGTTTAAAGCTACATCTCTGAGGC----AACAGGGACTTCTCAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGTCAGCCTGTAGCCTCCACCTCCACTTCCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCGCAGCTTGTTACCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA s panTro5.chr3 200081731 206 + 202621043 GGGAGTTTAAAGCTACATCTCTGAGGC----AACAGGGACTTCTCAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGTCAGCCTGTAGCCTCCACCTCCACTTCCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCGCGGCTTGTTACCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61431 206 + 190779 GGGAGTTTAAAGCTACATCTCTGAGGC----AACAGGGACTTCTCAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGTCAGCCTGTAGCCTCCACCTCCACTTCCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCGCGGCTTGTTACCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26262 206 + 106623 GGGAGTTTAAAGCTACATCTCTGAGGC----AACAGGGACTTCTCAGGGGAGAAGTTCATTGTCGGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGTCAGCCTGTAGCCTCCACCTCCACTTCCTGTCACTCTGCCCTTGGGCCTCATCTCTGCG----TATCCGCAGCTTGTTATCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834133 206 + 123690457 GGGAGTTTAAAGCTACATCTTTGAGGC----AACAGGGACTTCAAAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGTCAGCCTGTAGCCTCCACCTCCACTTCCTGTCACTCTGCACTTGGGCCTCATCTCTGTG----TATCCGCAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435239 209 + 204787373 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGCCAGCCTGTAGCCTCCACCTCCACTTGCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43049 209 + 192460366 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGCCAGCCTGTAGCCTCCACCTCCACTTGCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATTCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518350 209 + 19675229 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCCGGCCAGCCTGTAGCCTCCACCTCCACTTGCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAGCACAAACATTAATCACAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453205 209 + 16847902 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAC-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGCCAGCCTGTAGCCTCCACCTCCACTTGCTGTCCCTCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390739 209 - 91754291 GGGAGTTTAAAGCTACATCCCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTCCAATGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGCCAGCCTGTAGCCTCCACCTCCACTTCCTGTCGCTCTCCCCTTGGGCCTCATCTCTGTG----TGTCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 544912 209 - 1977891 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGCCAGTCCAG--------CTTCTGGCCAGCCTGTAGCCTCCACCTCCACTTGCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 426878 207 + 7796314 GGGAGTTTAAAGCGACATCTCTAAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAG--------CTTCTGGCCAGCCTGTAGCCTCCACCTCC-CTTCCTGTCA-TCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGAGGATGCAAACATTAATCACAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906036 199 - 74750902 GGGAGTTGAAAGCTCTATCTCTCAGGC----AACGGGGACTCCTCAGGGGAG-GACTCGTTGCCAGAGGCTGCCTGGTCAGTCCAG--------CTTCCGGCCTGC----AGCCTCCACCTGCACCTCCCGTCACTCTGTCCTTGGGCCTCATCTCTGTG----T--CCACAGCTTGTTCCCACTTTTCTGGAGGAGGTGGGAATACAAATGTTAATCACAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435108 190 + 17725628 GGGAGTTGAAAGCTGTATCTCTGAGGC----AACGGGGACTCCTCA-GTGAG-AACTCG-TGCCAGAGGCTGCCTGGTCAGCCCAG--------CCTCCGGCCAGC------------CCTCCCCCTCCTGTCACTCTGTCCTTGGGCCTCACCTCTGTG----TACCCACAGC-TGCTCCCACCTTTCTGGAGGAGGTGGGAATACAAATATTAATGACAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397395 192 - 6778120 GGGAGTTGAAAGCTGTATCTCTGAGGC----AACGGGGACTCCTCAGGGGAG-AACTCG-TGCCAGAGGCTGCCTGGTCAGCCCAG--------CTTCCGGCCTCC-----------ACCGCCACCTCCTGTCACTCTGTCC-TGGGCCTCGCCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGAAGAGGTGGGAATACAGATATTAATCACAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51674 199 - 69927 GGGAGTTGAAAGCTCTATCTCTGAGGC----AACGGGGACTCCTCAGGGGAG-AGCTCGTTGCCAGAGGCTGCCTGGTCAGTGCAG--------CTTCCGGTCTGC----AGCCTCCACCTCCGCCTCCTGTCA--CTGTCCTTGGGCCTCATCTCTGCG----TATCCACAGCTTGCTCCCACCTTTCTGGAGGAGGTGGGAATACAAATATTAATCACAA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65415324 196 - 98207768 GGGAGTTTAAACCTTCATTTCTGAAAC----AACAGAAGCGTCTCAGAGAGG---CGCATTGTCAGCAACTCTCCCGTAAGGGCAG--------CTTGTGGGCAGC-TGGAGTGTCTGCCTCTACTGC---TCATCTTCTCCTTATGGTGCATTCCTGAG----TATCTTTGCCTTGTT-CTACTTTTTTGGGCAAG--GGGAATAAAAATGTTAATCATga i mm10.chr16 I 12 I 545 s canFam3.chr33 29051549 202 + 31377067 GGGGGTTTAAAGCTACGTGTCTGAGAC----AACAGGTACTTCTCAGGGAAGAAGCCCCTTGTCAGAGGCTGCGT-GTCAGCCCAG--------CTTCTGGCCAGCCTGGAACCTCCACCTCCACTTC---TGACACTGTCCTTGGGCCTCGTCCCTGTGGTATTATCCTCAGCTGGCCCTGGTCTGT---GGAGACGTGA-AATAAAAATATCCACGACAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3874364 192 + 6579706 AGGAGGTTAAAGTTATATCTTTGAGTC----AACAGATACT-------------------TATCAGAACCTTCTTGGGCAACCCAGCATCACAACCTCTTGCACCCCAGTAGCCTCCTCCTCCATTTCCT-TCACTCTTTCCTTATGCCTCATCCCTGTGG---TTTCCTCATCCTGC-CCTTCCTTTCT-GAGGAGATGA-AATAATGATGTTAATCACCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I a score=138538.000000 s hg38.chr3_KI270779v1_alt 98118 17 + 205312 CCACTCAATACATAAAG s panTro5.chr3 200081937 17 + 202621043 CCACTCAATACATAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61637 17 + 190779 CCACTCAATACATAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26468 17 + 106623 CCGCTCAATACATAAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834339 17 + 123690457 CCACTCAGTACAGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435448 17 + 204787373 CCACTCAATAAATAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43258 17 + 192460366 CCACTCAATAAATAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518559 17 + 19675229 CCACTCAATAAATAAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453414 17 + 16847902 CCACTCAATAAATAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390948 17 - 91754291 TCACTCAATAAATAAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 545121 17 - 1977891 CCACTCAATAAATAAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 427085 17 + 7796314 CCACTCAATAAATAAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906235 17 - 74750902 CCACTCAATAAATAAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435298 17 + 17725628 CCACCCAATAAATAAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397587 17 - 6778120 CCGCCCAATAAATAAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 51873 17 - 69927 CCACTCAATAAAGAAAG i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29051751 5 + 31377067 CCGCC------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3874556 5 + 6579706 -CAGCC----------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65415520 545 - 98207768 I a score=323870.000000 s hg38.chr3_KI270779v1_alt 98135 34 + 205312 ATATTATTGAATATCTTTCATGTTATAGGCAGG-G s panTro5.chr3 200081954 34 + 202621043 ATATTATTGAATATCTTTCGTATTATAGGCAGG-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61654 34 + 190779 ATATTATTGAATATCTTTCGTATTATAGGCAGG-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26485 33 + 106623 ATATTATTGAATATCTTTCGTATTATAGGCA-G-G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834356 34 + 123690457 ATATTATTGAATATCTTTTGTATTGTAGGTAGG-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435465 34 + 204787373 ATATTATTGAATATCTTTTGTATTGTAGAAAGG-G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43275 34 + 192460366 ATATTATTGAATATCTTTTGTATTGTAGAAAGG-G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518576 34 + 19675229 ATATTATTGAATATCTTTTGTATTGTAGAAAGG-G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453431 34 + 16847902 ATATTATTGAATACCTTTTGTATTGTAGAAAGG-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390965 34 - 91754291 ATATTATTGAATACCTTTTGTATTGTAGGCAGG-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 545138 34 - 1977891 ATATTATTGAATATCTTTTGTATTGTAGAAAGG-G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 427102 34 + 7796314 ATATTATTGAATACCTTTTGTATTGTAGGCAGG-G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906252 33 - 74750902 ATATTGTTGAGTATCTTTTGTGTTGTAGGCAGG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435315 33 + 17725628 ATATTGTTGAGTGTCTATAGTGCTGTAGGCAGG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 397604 34 - 6778120 ATATTGTTGAGTGTCTTTTGTGTTGTAGGCAGGG- i cebCap1.NW_016107444v1 C 0 I 2214 s aotNan1.NW_018503669v1 51890 33 - 69927 ACATTGTTGAGTATCTTTTGTGTTGTTGGCAGG-- i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65416065 34 - 98207768 ATGTTATTGTATATCTTTTTTATTCTAGGTAAG-A i mm10.chr16 I 545 C 0 s canFam3.chr33 29051756 31 + 31377067 ---TTACCGAACATCACTCATGTGCCAGGGAGA-A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3874561 31 + 6579706 ---TTACTGATTTTCTTCTGTGTTTCAGGCAGG-G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I a score=299131.000000 s hg38.chr3_KI270779v1_alt 98169 31 + 205312 GTGATATAAACATGTTTCACACCCAGTAAGC s panTro5.chr3 200081988 31 + 202621043 GTGATATAAACATGTTTCACACCCAGTAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61688 31 + 190779 GTGATATAAACATGTTTCACACCCAGTAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26518 31 + 106623 GTGATATAAACATGTTTCACACCCAGTAAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834390 31 + 123690457 GTGATATAAACACATTTCACAGCCAGTAAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435499 31 + 204787373 GTGATATAAACATGTTTCACACCCAGTAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43309 31 + 192460366 GTGATATAAACATGTTTCACACCCAGTAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518610 31 + 19675229 GTGATATAAACATGTTTCACACCCAGTAAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453465 31 + 16847902 GTGATATAAACATGTTTCACACCCAGTAAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 390999 31 - 91754291 GTGATATAAACATGTTTCACATCCAGTAAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 545172 31 - 1977891 GTGATATAAACATGTTTCACACCCAGTAAGC i manLeu1.NW_012102020v1 C 0 I 63 s colAng1.NW_012118932v1 427136 31 + 7796314 GTGATATAAACATGTTTCACACCCAGGAAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906285 30 - 74750902 GTGACATAAAAACGTTTCACACCCA-TGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435348 31 + 17725628 GTGACATAAAAATGTCTCACACCCAGTGAGC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51923 31 - 69927 GTGACATAAAAATGTTTCACACCCAGTGAGC i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65416099 31 - 98207768 TTAATATAAAAACACTTTGCAGTCAGTAGGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29051787 21 + 31377067 GTGAGAGAGAAA-------CCCTCAGGA--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3874592 31 + 6579706 ATGATCTAAAACTATTTCACAAGCAGGAAAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I a score=1125.000000 s hg38.chr3_KI270779v1_alt 98200 1 + 205312 A s panTro5.chr3 200082019 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61719 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26549 1 + 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834421 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435530 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43340 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518641 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453496 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 391030 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 427167 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906315 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435379 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51954 1 - 69927 G i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65416130 1 - 98207768 A i mm10.chr16 C 0 I 1400 s dasNov3.JH569502 3874623 1 + 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e canFam3.chr33 29051808 0 + 31377067 C e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I a score=181575.000000 s hg38.chr3_KI270779v1_alt 98201 27 + 205312 CTGGCCCCAGCAGAACGTTCTCTCCGg s panTro5.chr3 200082020 27 + 202621043 CTGGCCCCAGCGGAACGTTCTCTCCGg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61720 27 + 190779 CTGGCCCCAGCGgaacgttctctctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26550 27 + 106623 CTGACCCCAGCAGAACGTTCTCTCCGg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834422 27 + 123690457 TTGGCCCCAGCTGAACATTCTCTCTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435531 27 + 204787373 TTGGCCCCCGCTGAACGTTCTCTCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43341 27 + 192460366 TTGGCCCCCGCTGAACGTTCTCTCTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518642 27 + 19675229 TTGGCCCCCGCTGAACGTTCTCTCTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453497 27 + 16847902 TTGGCCCCCGCTGGACGTTCTCTCTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 391031 27 - 91754291 TTGGCCCCCGCTGAACGTTCTCTCTGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 427168 27 + 7796314 TTGGCCCCCGCtgaacgttctctctga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906316 23 - 74750902 TTGGCACCAGCTGAAGGTTCTCT---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435380 25 + 17725628 TTGGCACCAGCtgaatgttctct--ga i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51955 25 - 69927 TTGGCACC--CCgaatgttctctctga i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29051808 21 + 31377067 ------CCGGCTGTGCGTGCTTGCTGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3874624 27 + 6579706 TGGGCACTAGCtgaatgttctgtgtga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I a score=77693.000000 s hg38.chr3_KI270779v1_alt 98228 13 + 205312 tgccaggcagtgt s panTro5.chr3 200082047 13 + 202621043 tgccaggcagtgt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26577 13 + 106623 tgccaggcagtgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834449 13 + 123690457 TGCCAGGCAGTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435558 13 + 204787373 TGCCAGGCAGTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43368 13 + 192460366 TGCCAGGCAGTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518669 13 + 19675229 TGCCAGGCAGTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453524 13 + 16847902 TGCCAGGCAGTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 391058 13 - 91754291 TGCCAGGCAGtgt i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 427195 11 + 7796314 tgccaggcggt-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906339 5 - 74750902 -------CTG-AT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435405 13 + 17725628 tgccaggcagcat i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51980 13 - 69927 tggcaggcagtgt i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29051829 13 + 31377067 CGTCAGGCAGTAA i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3874651 13 + 6579706 tgcccagcagtgc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e manLeu1.NW_012102020v1 545203 63 - 1977891 I a score=6228.000000 s hg38.chr3_KI270779v1_alt 98241 1 + 205312 g s panTro5.chr3 200082060 1 + 202621043 g i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26590 1 + 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834462 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435571 1 + 204787373 G i rheMac8.chr2 C 0 I 13 s macFas5.chr2 43381 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518682 1 + 19675229 G i macNem1.NW_012014355v1 C 0 I 13 s cerAty1.NW_012004056v1 453537 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 I 13 s colAng1.NW_012118932v1 427206 1 + 7796314 g i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906344 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435418 1 + 17725628 g i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51993 1 - 69927 g i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 3874664 1 + 6579706 a i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051842 1 + 31377067 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C a score=42442.000000 s hg38.chr3_KI270779v1_alt 98242 15 + 205312 ccaccagctttgcat s panTro5.chr3 200082061 15 + 202621043 ccaccagctttgcat i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26591 15 + 106623 ccaccagctttgcat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834463 15 + 123690457 CCACCAGCTTTGCAT i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 427207 15 + 7796314 ccaccagcttcgtgt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 906345 15 - 74750902 CCGCCAGCTCTGCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435419 15 + 17725628 ccgccagctctgcat i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 51994 15 - 69927 ccaccagctctgcat i aotNan1.NW_018503669v1 C 0 I 22 s canFam3.chr33 29051843 15 + 31377067 ATGCGAGCTTCGCAG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3874665 15 + 6579706 ccatgagttttccat i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43382 0 + 192460366 C e rheMac8.chr2 202435572 13 + 204787373 I a score=16096.000000 s hg38.chr3_KI270779v1_alt 98257 7 + 205312 atgttat s panTro5.chr3 200082076 7 + 202621043 atgttat i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26606 7 + 106623 atgttat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834478 7 + 123690457 ATGttac i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 43382 7 + 192460366 ATGCCAG i macFas5.chr2 C 0 I 6 s colAng1.NW_012118932v1 427222 7 + 7796314 atgttat i colAng1.NW_012118932v1 C 0 I 842 s calJac3.chr17 906360 7 - 74750902 ATGCTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 435434 7 + 17725628 atgctgt i saiBol1.JH378146 C 0 I 1973 s canFam3.chr33 29051858 7 + 31377067 GGGTTAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3874680 7 + 6579706 atgttat i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e rheMac8.chr2 202435572 13 + 204787373 I a score=2100.000000 s hg38.chr3_KI270779v1_alt 98264 1 + 205312 c s panTro5.chr3 200082083 1 + 202621043 c i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26613 1 + 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834485 1 + 123690457 c i nomLeu3.chr11 C 0 T 2473 s calJac3.chr17 906367 1 - 74750902 C i calJac3.chr17 C 0 C 0 s canFam3.chr33 29051865 1 + 31377067 C i canFam3.chr33 C 0 I 1536 s dasNov3.JH569502 3874687 1 + 6579706 c i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43389 6 + 192460366 I e rheMac8.chr2 202435572 13 + 204787373 I a score=910.000000 s hg38.chr3_KI270779v1_alt 98265 1 + 205312 t s panTro5.chr3 200082084 1 + 202621043 t i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26614 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 43395 1 + 192460366 t i macFas5.chr2 I 6 C 0 s dasNov3.JH569502 3874688 1 + 6579706 t i dasNov3.JH569502 C 0 I 1541 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e rheMac8.chr2 202435572 13 + 204787373 I e nomLeu3.chr11 120834486 2473 + 123690457 T a score=12470.000000 s hg38.chr3_KI270779v1_alt 98266 26 + 205312 gatGCCAGGCAGTGTGCCACCGGCTT s panTro5.chr3 200082085 26 + 202621043 gatGCCAGGCAGTGTACCACCAGCTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26615 26 + 106623 gatGCCAGGCAGTGTACCACCAGCTT i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 43396 24 + 192460366 gatgccaggcagtg--ccaccagctt i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e rheMac8.chr2 202435572 13 + 204787373 I e nomLeu3.chr11 120834486 2473 + 123690457 T a score=7155.000000 s hg38.chr3_KI270779v1_alt 98292 13 + 205312 TGTATATGTTATC s panTro5.chr3 200082111 13 + 202621043 TGCATATGTTATC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26641 13 + 106623 TGCATATGTTATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120832013 13 + 123690457 TGAACATTCTCTC i nomLeu3.chr11 T 2473 C 0 s macFas5.chr2 43420 13 + 192460366 cgtgtatgttatc i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e rheMac8.chr2 202435572 13 + 204787373 I a score=546.000000 s hg38.chr3_KI270779v1_alt 98305 1 + 205312 T s panTro5.chr3 200082124 1 + 202621043 T i panTro5.chr3 C 0 T 78 s gorGor5.CYUI01000576v1 26654 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 T 78 s nomLeu3.chr11 120832026 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43433 0 + 192460366 C e rheMac8.chr2 202435572 13 + 204787373 I a score=7134.000000 s hg38.chr3_KI270779v1_alt 98306 80 + 205312 GATGCCAGGCAGTGTGCCACCGGCTTTGCATATGTTATCTGATGCCAGGCAGTGTACCACCAGCTTTGCATATGTTATCT s nomLeu3.chr11 120832027 80 + 123690457 GATGCCAGGCAGTGTGCCACCAGCTTTGCATATGttacctgatgccaggcagtgtgccatcagctttgcatatgttatct i nomLeu3.chr11 C 0 T 40 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43433 0 + 192460366 C e rheMac8.chr2 202435572 13 + 204787373 I e gorGor5.CYUI01000576v1 26655 78 + 106623 T e panTro5.chr3 200082125 78 + 202621043 T a score=191.000000 s hg38.chr3_KI270779v1_alt 98386 2 + 205312 GA s nomLeu3.chr11 120832067 2 + 123690457 ga i nomLeu3.chr11 T 40 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43433 0 + 192460366 C e rheMac8.chr2 202435572 13 + 204787373 I e gorGor5.CYUI01000576v1 26655 78 + 106623 T e panTro5.chr3 200082125 78 + 202621043 T a score=20622.000000 s hg38.chr3_KI270779v1_alt 98388 38 + 205312 TGCCAGGCAGTGTACCACCGGCTTTGCATATGTTATCT s panTro5.chr3 200082047 38 + 202621043 tgccaggcagtgtgccaccagctttgcatatgttatct i panTro5.chr3 T 78 C 0 s gorGor5.CYUI01000576v1 26577 38 + 106623 tgccaggcagtgtgccaccagctttgcatatgttatct i gorGor5.CYUI01000576v1 T 78 C 0 s nomLeu3.chr11 120832069 38 + 123690457 tgccaggcagtgtgccatcagctttgcatatgttatct i nomLeu3.chr11 C 0 T 40 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43433 0 + 192460366 C e rheMac8.chr2 202435572 13 + 204787373 I a score=20302.000000 s hg38.chr3_KI270779v1_alt 98426 37 + 205312 GATGCCAGGCAGTGTGCCACCAGCTTTGCATATGTTA s panTro5.chr3 200082085 37 + 202621043 gatGCCAGGCAGTGTACCACCAGCTTTGCATATGTTA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 26615 37 + 106623 gatGCCAGGCAGTGTACCACCAGCTTTGCATATGTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120832067 37 + 123690457 gatgccaggcagtgtgccatcagctttgcatatgtta i nomLeu3.chr11 T 40 I 2382 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e macNem1.NW_012014355v1 518683 13 + 19675229 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545203 63 - 1977891 I e chlSab2.chr15 391071 0 - 91754291 C e cerAty1.NW_012004056v1 453538 13 + 16847902 I e macFas5.chr2 43433 0 + 192460366 C e rheMac8.chr2 202435572 13 + 204787373 I a score=2548.000000 s hg38.chr3_KI270779v1_alt 98463 1 + 205312 T s panTro5.chr3 200082122 1 + 202621043 T i panTro5.chr3 C 0 I 2 s gorGor5.CYUI01000576v1 26652 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 I 2 s nomLeu3.chr11 120834486 1 + 123690457 t i nomLeu3.chr11 I 2382 C 0 s rheMac8.chr2 202435585 1 + 204787373 t i rheMac8.chr2 I 13 C 0 s macNem1.NW_012014355v1 518696 1 + 19675229 t i macNem1.NW_012014355v1 I 13 C 0 s cerAty1.NW_012004056v1 453551 1 + 16847902 t i cerAty1.NW_012004056v1 I 13 C 0 s manLeu1.NW_012102020v1 545266 1 - 1977891 t i manLeu1.NW_012102020v1 I 63 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e chlSab2.chr15 391071 0 - 91754291 C e macFas5.chr2 43433 0 + 192460366 C a score=6876.000000 s hg38.chr3_KI270779v1_alt 98464 2 + 205312 GA s panTro5.chr3 200082125 2 + 202621043 GA i panTro5.chr3 I 2 C 0 s gorGor5.CYUI01000576v1 26655 2 + 106623 GA i gorGor5.CYUI01000576v1 I 2 C 0 s nomLeu3.chr11 120834487 2 + 123690457 ga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435586 2 + 204787373 ga i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 518697 2 + 19675229 ga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453552 2 + 16847902 ga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 391071 2 - 91754291 ga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 545267 2 - 1977891 ga i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 61747 0 + 190779 C e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e macFas5.chr2 43433 0 + 192460366 C a score=128054.000000 s hg38.chr3_KI270779v1_alt 98466 37 + 205312 tgccaggcagtgtgccaccagctttgcatatgttatc s panTro5.chr3 200082127 37 + 202621043 tgccaggcagtgtgccaccagctttacatatgttatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61747 37 + 190779 tgccaggcagtgtgccaccagctttacatatgttatc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26657 37 + 106623 tgccaggcagtgcgccaccagctttgcatatgttatc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834489 37 + 123690457 tgccaggcagtgtgccatcagctttgcatatgttatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435588 35 + 204787373 tgccaggcagt--gccaccagcttcgtgtatgttatc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 518699 35 + 19675229 tgccaggcagt--gccaccagcttcgtgtatgttatc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453554 35 + 16847902 tgccaggcagt--gccaccagcttcgtgtatgttatc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 391073 35 - 91754291 tgccaggcagt--gccaccagcttcgtgtatgttatc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 545269 35 - 1977891 tgccaggcagt--gccaccagctttgtgtatgttatc i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e calJac3.chr17 906368 0 - 74750902 C e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e macFas5.chr2 43433 0 + 192460366 C a score=108555.000000 s hg38.chr3_KI270779v1_alt 98503 19 + 205312 tcctctatttaaccttcaa s panTro5.chr3 200082164 19 + 202621043 tcctctatttaaccttcaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61784 19 + 190779 tcctctatttaaccttcaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26694 18 + 106623 tcctctatttaaccttc-a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834526 19 + 123690457 tcctctatttaaccttcaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435623 19 + 204787373 tcctctatttaaccttcaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 43433 19 + 192460366 tcctctatttaaccttcaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518734 19 + 19675229 tcctctatttaaccttcaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 453589 19 + 16847902 tcctctatttaaccttcaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 391108 19 - 91754291 tcctctatttaaccttcaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 545304 19 - 1977891 tcctctatttaaccttcaa i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 906368 19 - 74750902 TCCTCTACTTAACCTTCCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52009 22 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I a score=489175.000000 s hg38.chr3_KI270779v1_alt 98522 73 + 205312 aacagccttaggaggtgggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCTCTGGAAAG s panTro5.chr3 200082183 73 + 202621043 aacagccttaggaggtgggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61803 73 + 190779 aacagccttaggaggtgggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26712 72 + 106623 aacagccttaggaggt-ggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834545 73 + 123690457 aacagccttatgaggtgggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202435642 73 + 204787373 aacagccttaggaggtgggtaacacgaccgcatctgatagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i rheMac8.chr2 C 0 I 780 s macFas5.chr2 43452 73 + 192460366 aacagccttaggaggtgggtaacacgaccgcatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 518753 73 + 19675229 aacagccttaggaggtgggtaacacgaccgcatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i macNem1.NW_012014355v1 C 0 I 810 s cerAty1.NW_012004056v1 453608 73 + 16847902 aacagccttaggaggtgggtaacacgaccgcatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i cerAty1.NW_012004056v1 C 0 I 829 s chlSab2.chr15 391127 73 - 91754291 aacagccttagaaggtgggtaacatgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i chlSab2.chr15 C 0 I 722 s manLeu1.NW_012102020v1 545323 73 - 1977891 aacagccttaggaggtgggtaacacgaccgcatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i manLeu1.NW_012102020v1 C 0 I 1006 s calJac3.chr17 906387 71 - 74750902 -GCAGCCTTGTGAGGT-GGTAACACGACCCCAGCTGACAGGGTTAGAGACGGCAGCTAAACTGCTCTGGAAAG i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 52031 73 - 69927 aacagcctcatgaggcgggtaacacgaccccacctgacagGGTTACAGATGGCAGCTAAACTGCTCTGGAAAG i aotNan1.NW_018503669v1 I 22 I 2002 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I a score=2633.000000 s hg38.chr3_KI270779v1_alt 98595 4 + 205312 tgaa- s panTro5.chr3 200082256 4 + 202621043 tgaa- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61876 4 + 190779 tgaa- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26784 4 + 106623 TGaa- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834618 4 + 123690457 tgaa- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 43525 3 + 192460366 -AAA- i macFas5.chr2 C 0 I 738 s calJac3.chr17 906458 4 - 74750902 -AAAA i calJac3.chr17 C 0 I 1955 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e macNem1.NW_012014355v1 518826 810 + 19675229 I e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545396 1006 - 1977891 I e chlSab2.chr15 391200 722 - 91754291 I e cerAty1.NW_012004056v1 453681 829 + 16847902 I e rheMac8.chr2 202435715 780 + 204787373 I a score=1056226.000000 s hg38.chr3_KI270779v1_alt 98599 1212 + 205312 ggggtggcctgcccctccacacctgtgggtatttctagtcgggtgggatgagagactgagaaaagaaataaggcacagagacaaagtatagagaaacaacagtgggcccaggggaccgtcgctcagcataccaaggacctgcaccggcaccagtctctgagttttctcagtttttattgattattattttcattattttagcaaaaaggaatgtagtaggagagcagggtgataataaggagaaggtcagcaagaaacatgtgagcaaaagaatctgtgtcataattaagttcaagggaagatactatgcctggatgtgcacgtaggccagatttatgtttctctccacccaaacatctcagcagagtaaagaataataaagcagcattgctgcaaacatgtctcacctcccgccacagggtgg-tttttctcctgtctcagaattgaacaaatgtacaatcgggttttatactgagacattcagttcccaggggcaggcaggagacagtggccttcctctatctcaactgcaagaggagatcctcttttactaatccacctcagcacagaccctttacgggtgtcagcctgggggacggtcaggtctttgtcatcccacaaggccatatttcagactat-acatggggagaaagcttggacaataacctgctttcaagggcagaggtccctgcggctttccacagtgcattgtgcccctggtttattgagactagagaatggcgatgacttctaccaagtatactgcttgtaaacattttgttaacaaggcacgtcctgcacagccctagatcccttaaaccttgattttatacaacacatgtttttatgagctcaaggttggggcaaagttacaaattaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggag--tctcatgtctttcctttctacagagacacagtgacagtctgatcgctccttcttttccctGGAAAGAAAAATACtttattatttgttgattagataagacattcatatgatttgaaatggaaaggtacgaaaaggttcaccataaaatgcctttctcccctggctgtgcccccacccag---ttctctccacacatgtaacccgtgagattgtctcttgtgtgtaa-ttttctgcacatgaaatgtacatacggaagcaaatatatgtgactatttcatcctcctc s panTro5.chr3 200082260 1213 + 202621043 ggggtggcctgcccctccacacctgtgggtatttctagtcgggtgggatgagagactgagaaaagaaataaggcacagagacaaagtatagagaaacaacagtgggcccaggggaccggtgctcagcataccaaggacctgcaccggcaccggtctctgagttttctcagtttttattgattattattttcattattttagcaaaaaggaatgtagtaggagagcagggtgataataaggagaaggtcagcaaaaaacatgtgagcaaaagaatctgtgtcataattaagttcaagggaagatactatgcctggatgtgcacgtaggccagatttatgtttctccccacccaaacatctcagcggagtgaagaataataaagcagcattgctgcaaacatgtctcacctcccgccacagggcgg-tttttctcctatctcagaattgaacaaatgtacaatcaggttttataccgagacattcagttcccaggggcaggcagaagacagtggcgctcctctatctcaactgcaagaggctttcctcttttactaatccacctcagcacagaccctttacgggtgtcagcctgggggacggtcaggtctttctcatcccacgaggccatatttcagactatcacatggggagaaaccttggacaataccctgctttcaagggcagaggtccctgcggctttccacagtgcgttgtgcccctggtttattgagactagagaatggcgatgacttttaccaagtatactgcctgtaaacattttgttaacaaggcacgtcctgcacagccctagatcccttaaaccttgattttatacaacacatgtttttatgagctcaaggttggggcaaagttacaaatgaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggag--tctcatgtctttcctttctacatagacacagtgacagtctgatcgctccttcttttccctGGAAAGAAAAATACtttattatttgttgattagataagacattcatatgatttgaaatggaaaggtacgaaaaggttcaccataaaatgcctttctcccctggctgtgccctcacccag---ttcgctccacacatgtaacccgtgagattgtctcttgtgtgtaa-ttttctgcacatgaaatgtacatacggaagcaaatatatgtgactatttcatcctcctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 61880 1210 + 190779 ggggtggcctgcccctccacacctgtgggtatttctagtcgggtgggatgagagactgagaaaagaaataaggcacagagacaaagtatagagaaacaacagtgggcccaggggaccggtgctcagcataccaaggacctgcaccggcaccggtctctgagttttctcagtttttattgattattattttcattattttagcaaaaaggaatgtagtaggagagcagggtgataataaggagaaggtcagcaaaaaacatgtgagcaaaagaatctgtgtcataattaagttcaagggaagatactatgcctggatgtgcacgtaggccagatttatgtttctccccacccaaacatctcagcggagtgaagaataataaagcagcattgctgcaaacatgtctcacctcccgccacagggcgg-tttttctcctatctcagaactgaacaaatgtacaatcgggttttataccgagacattcagttcccaggggcaggcagaagacagtggcgctcctctatctcaactgcaagaggctttcctcttttactaatccacctcagcacagaccctttacgggtgtcagcctgggggatggtcaggtctttctcatcccacgaggccatatttcagactatcacatggggagaaaccttggacaataccctgctttcaagggcagaggtccctgcggctttccacagtgcggtgtgcccctggtttattgagactagagaatggcgatgacttttaccaagtatactgcttgtaaacattttgttaacaaggcacgtcctgcacagccctagatcccttaaaccttgattttatacaacacatgtttttatgagctcaaggttggggcaaagttacaaatgaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggag--tctcatgtctttcctttctacatagacacagtgacagtctgtg---tccttcttttccctGGAAAGAAAAATACtttattatttgttgattagataagacattcatatgatttgaaatggaaaggtacgaaaaggttcaccataaaatgcctttctcccctggctgtgccctcacccag---ttctctccacacatgtaacccgtgagattgtctcttgtgtgtaa-ttttctgcacatgaaatgtacatacggaagcaaatatatgtgactatttCATCCTCCtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 26788 1212 + 106623 -gggtggcctgcccctccacacctgtgggtatttctagtcgggt-ggatgagagactgagaaaagaaataaggcacagagacaaagtatagagaaacaacagtgggcccaggggaccggcgctcagcataccaaggacctgcaccggcaccagtctctgagttttctcagtttttattgattattattttcattattttagcaaaaaggaatgtagtaggagagcagggtgataataaggagaaggtcagcaaaaaacatgtgagcaaaagaatctgtgtcataattaagttcaagggaagatactatgcctggatgtgcacgtagggcagatttatgtttctctccacccaaacatctcagcagagtaaagaataataaagcagcattgctgcaaacatgtctcacctcccgccacagggcggttttttctcctgtctcagaattgaacaaatgtacaatc-ggttttataccgagacattcagttcccaggggcaggcaggagacagtggccctcctctatctcaactgcaagaggttctcctcttttactaatccacctcagcacagaccctttacgggtgtcaggctgggggacggtcaggtctttctcatcccacgaggccatatttcagactatcacatggggagaaaccttggacaatacctggctttcaagggcagaggtccctgcggctttccacggtgcattgtgcccctggtttattgagactagagaatggtgatgacttttaccaagtatactgcttgtaaacattttgttaataaggcacgtcctgcacagccctagatcccttaaaccttgattccatacaacacatgtttttgtgagctcaaagttggggcaaagttacaaattaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggag--tctcatgtctttcctttctacatagacacagtgacagtctgatcgctccttcttttccctGGAAAGAAAAATACtttattatttgttgattagataagacattcatatgatttgaaatggaaaggtacaaaaaggttcaccataaaatgtctttctcccctggctgtgcccccacccag---ctctctccacacatgtaacccatgagattgtctcttgtgtgtaatttttctgcacatgaaatgtacatacggaagcaaatatatgtGACTATGTCATCCTCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120834622 1208 + 123690457 ggggtggcctgcccctccacagctgtgggtatttctagttgggt-ggacaagagac--agaaaagaaataagacacagagacaaagtatagagaaacaacagtgggcccaggggaccggcgctcagcacaccaaggacctgcaccagcaccggcctctgagttccctcagtttttattgattattattttcattatttcagcaaaaaggaatgtagtaggagagcagggtgataataagg---aggtcagcaaaaaacatgtgagcaaaagaatctatgtcataattaagttcaagggaaggtactatgcctggacgtgcacgtaggccagatttatgtttctctccacccaaacatctcagtggagtaaagaataacaaggcagcattgctgccaacatgtctcgcctcccaccacagggcgg-ttttt---ctatctcagaattgagcaaatatgcgatcgggttttataccgagacattcagttcccaggggcaggcaggagacagtggccttcctctctctcaactgcaagaggctttcctcttttactaatccacctcagcacagaccctttacgggtgtcaggctgggggacggtcaggtctttctcatcccacgaggccatatttcagactatcacatggggagaaacctgggacaatatcccgctttccagggcagaggtccctgcggctttccacagtgcatggtgcccctggtttattgagactagagaatggagatgacttttaccaagtatactgcctgtaaacattttgttaacaaggcacgtcctgcacagccctagatcccttaaaccttgattttatacaacacatgtttctgtgagctcgaggttggggcaaagctacaaattaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggagtctctcacgtctttcctttcgacatagacacagtgacagtctgatcgctccttcttttccctGGAAAGAAAAATAC-TTAttatttgttgattagataagacactcatatgattggaaatggaaaggtacaaaaaggtacaccattaaatgtctttctgccctggccgtgcccccacccggcacttctcttcacacatgtaacccgtggggttgcctcttgtgcgtca-ttttctgcatatgaaatgtacatacggaagcaaatatatgtgtctatttcatcctcctc i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e macNem1.NW_012014355v1 518826 810 + 19675229 I e calJac3.chr17 906462 1955 - 74750902 I e saiBol1.JH378146 435441 1973 + 17725628 I e colAng1.NW_012118932v1 427229 842 + 7796314 I e manLeu1.NW_012102020v1 545396 1006 - 1977891 I e chlSab2.chr15 391200 722 - 91754291 I e cerAty1.NW_012004056v1 453681 829 + 16847902 I e macFas5.chr2 43528 738 + 192460366 I e rheMac8.chr2 202435715 780 + 204787373 I a score=3156.000000 s hg38.chr3_KI270779v1_alt 99811 4 + 205312 tttt s panTro5.chr3 200083473 4 + 202621043 tttt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 28000 3 + 106623 -ttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120835830 4 + 123690457 tttt i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 428071 4 + 7796314 tttt i colAng1.NW_012118932v1 I 842 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e panPan2.chrUn_NW_014024201v1 63090 0 + 190779 C e macNem1.NW_012014355v1 518826 810 + 19675229 I e calJac3.chr17 906462 1955 - 74750902 I e saiBol1.JH378146 435441 1973 + 17725628 I e manLeu1.NW_012102020v1 545396 1006 - 1977891 I e chlSab2.chr15 391200 722 - 91754291 I e cerAty1.NW_012004056v1 453681 829 + 16847902 I e macFas5.chr2 43528 738 + 192460366 I e rheMac8.chr2 202435715 780 + 204787373 I a score=9555.000000 s hg38.chr3_KI270779v1_alt 99815 5 + 205312 ttttt s panTro5.chr3 200083477 5 + 202621043 ttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63090 5 + 190779 ttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28003 5 + 106623 ttttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120835834 5 + 123690457 ttttt i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 391922 5 - 91754291 ttttt i chlSab2.chr15 I 722 C 0 s colAng1.NW_012118932v1 428075 5 + 7796314 ttttt i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e macNem1.NW_012014355v1 518826 810 + 19675229 I e calJac3.chr17 906462 1955 - 74750902 I e saiBol1.JH378146 435441 1973 + 17725628 I e manLeu1.NW_012102020v1 545396 1006 - 1977891 I e cerAty1.NW_012004056v1 453681 829 + 16847902 I e macFas5.chr2 43528 738 + 192460366 I e rheMac8.chr2 202435715 780 + 204787373 I a score=55378.000000 s hg38.chr3_KI270779v1_alt 99820 33 + 205312 tttttt--------------------ttttttgagac--agtttcgctcttgttg s panTro5.chr3 200083482 33 + 202621043 tttttt--------------------ttttttgagac--agtttcgctcttgttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63095 33 + 190779 tttttt--------------------ttttttgagac--agtttcgctcttgttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28008 35 + 106623 tttttt--------------------ttttttgagacagagtttcgctcttgttg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120835839 55 + 123690457 ttttttttttttggtttttttttttgttttttgagaaagagtttcgctcttgttg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 44266 34 + 192460366 tttttt--------------------ttttttgagatggagtctcactc-tgtca i macFas5.chr2 I 738 C 0 s chlSab2.chr15 391927 34 - 91754291 tttttt--------------------ttttttgagatggagtctcactc-tgtca i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 428080 34 + 7796314 tttttt--------------------ttttttgagacagagtctcactc-tgtca i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e macNem1.NW_012014355v1 518826 810 + 19675229 I e calJac3.chr17 906462 1955 - 74750902 I e saiBol1.JH378146 435441 1973 + 17725628 I e manLeu1.NW_012102020v1 545396 1006 - 1977891 I e cerAty1.NW_012004056v1 453681 829 + 16847902 I e rheMac8.chr2 202435715 780 + 204787373 I a score=100323.000000 s hg38.chr3_KI270779v1_alt 99853 38 + 205312 cccaggttggagtgtagtgctgcgatctcagatcacca s panTro5.chr3 200083515 38 + 202621043 cccaggttggagtgtagtgctgcgatctcagatcacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63128 38 + 190779 cccaggttggagtgtagtgctgcgatctcagatcacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28043 38 + 106623 cccaggttggagtgtagtgctgcgatctcagatcacca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120835894 38 + 123690457 cccaggctggagtgtaatgctgcgatctcagctcacca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436495 38 + 204787373 cccaggctggagtgcagtggtgtgatctcgactcactg i rheMac8.chr2 I 780 C 0 s macFas5.chr2 44300 38 + 192460366 cccagtctggagtgcagtggcgtgatctcgactcactg i macFas5.chr2 C 0 C 0 s chlSab2.chr15 391961 38 - 91754291 cccaggctggagtgcagtggcgtgatctcgactcactg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 428114 38 + 7796314 cccaggctggagtgcagtggcgtgatctcgactcactg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e macNem1.NW_012014355v1 518826 810 + 19675229 I e calJac3.chr17 906462 1955 - 74750902 I e saiBol1.JH378146 435441 1973 + 17725628 I e manLeu1.NW_012102020v1 545396 1006 - 1977891 I e cerAty1.NW_012004056v1 453681 829 + 16847902 I a score=679472.000000 s hg38.chr3_KI270779v1_alt 99891 136 + 205312 caacctccgcctcccaggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacgcaccaccatgcccggctca-ttttgtgtttttagtaaagacgggatttc-tccatgttggtcaggctg s panTro5.chr3 200083553 136 + 202621043 caacctccgcctcccaggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacgtgccaccatgcccggctca-ttttgtatttttagtaaagacgggatttc-tccatgttggtcaggctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63166 136 + 190779 caacctccgcctcccaggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacgcgccaccatgcccggctca-ttttgtatttttagtaaagacgggatttc-tccatgttggtcaggctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28081 135 + 106623 caacctccgcctcccaggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacgcaccaccatgcccggctca-ttttgtgtttttagtaaagacgggatttc-tccatgtt-gtcaggctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120835932 136 + 123690457 caacctctgcctcccaggttcaggcgattctcctgcctccgcctcctgagtagctgggattacaggcatgcaccaccatgcccggctca-ttttgtatttttagtaaagacggggtttc-tccatgttcgtcaggctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436533 138 + 204787373 caacctccacctccagggctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacacccagctcatttttgtatttttagtagagacagggtttctactatgctggccaggctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44338 138 + 192460366 caacctccacctccagggctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacacccagctgatttttgtatttttagtagagacaggttttctactatgctggccaggctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519636 138 + 19675229 caacctccacctccagggctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacacccagctgatttttgtatttttagtagagacagggtttctactatgctggccaggctg i macNem1.NW_012014355v1 I 810 C 0 s cerAty1.NW_012004056v1 454510 138 + 16847902 caacctccacctccagggctcaggtgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacgcccagctgatttttgtatttttagtagagacagggtttctactatactggccaggctg i cerAty1.NW_012004056v1 I 829 C 0 s chlSab2.chr15 391999 137 - 91754291 caacctccacctccagggctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacgtccagctgatttttgtatttttagtagagacagggtttc-accatgctggccaggctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546402 137 - 1977891 caacctccacctccagggctcaggtgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacgcccagctgatttttgtatttttagtagagacagggtttc-accatgctggccaggctg i manLeu1.NW_012102020v1 I 1006 C 0 s colAng1.NW_012118932v1 428152 137 + 7796314 caacctccacctccagggctcaggtgatcctcccacctcagcctcctgagtagctggaatgacaggtgtgagccaccacgcccagccgatttttgcatttttagtagagacagggtttc-accatgctggccaggctg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e calJac3.chr17 906462 1955 - 74750902 I e saiBol1.JH378146 435441 1973 + 17725628 I a score=13434.000000 s hg38.chr3_KI270779v1_alt 100027 2 + 205312 gt s panTro5.chr3 200083689 2 + 202621043 gt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63302 2 + 190779 gt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28216 2 + 106623 gt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836068 2 + 123690457 gt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436671 2 + 204787373 gt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44476 2 + 192460366 gt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519774 2 + 19675229 gt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454648 2 + 16847902 gt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392136 2 - 91754291 gt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546539 2 - 1977891 gt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428289 2 + 7796314 gt i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 437414 2 + 17725628 gc i saiBol1.JH378146 I 1973 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I e calJac3.chr17 906462 1955 - 74750902 I a score=321302.000000 s hg38.chr3_KI270779v1_alt 100029 48 + 205312 ctcaaactcccgatctcaggtgatccacctgcctctgcctcccaaagt s panTro5.chr3 200083691 48 + 202621043 ctcaaactcccgatctcaggtgatccacctgcctcagcctcccaaagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63304 48 + 190779 ctcaaactcccgatctcaggtgatccacctgcctcagcctcccaaagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28218 48 + 106623 ctcaaactcccgatctcaggtgatccacctgcctcagcctcccaaagt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836070 48 + 123690457 ctcaaactcccaacctcaggtgatccacctgcctcggcctcccaaagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436673 48 + 204787373 ctcgaactcctgacctcaggtgatccacctgcctcgccctcccaaagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44478 48 + 192460366 ctcgaactcctgacctcaggtgatccacctgcctcgccctcccaaagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519776 48 + 19675229 ctcgaactcctgatctcaggtgatccacctgcctcgccctcccaaagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454650 48 + 16847902 ctcgaactcctgacctcaggtgatccacctgcctcgccctcccaaagt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392138 48 - 91754291 ctcgaactcctgacctcaggtgatccacctgccttgccctcccaaagt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546541 48 - 1977891 ctcgaactcctgacctcaggtgacccacctgcctcgccctcccaaagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428291 48 + 7796314 ctcgaactcctgacctcaggtaatccacctgcctcggcctcccaaagt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908417 48 - 74750902 ctccacctccagggctcaggtgatcctcccacctgagcctcctgagta i calJac3.chr17 I 1955 C 0 s saiBol1.JH378146 437416 48 + 17725628 ctccacttccagggctcaggtgatcctcccacctgagcctcctgagta i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e aotNan1.NW_018503669v1 52104 2002 - 69927 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I a score=5757.000000 s hg38.chr3_KI270779v1_alt 100077 1 + 205312 g s panTro5.chr3 200083739 1 + 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63352 1 + 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28266 1 + 106623 g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836118 1 + 123690457 g i nomLeu3.chr11 C 0 I 293 s rheMac8.chr2 202436721 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44526 1 + 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519824 1 + 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454698 1 + 16847902 g i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392186 1 - 91754291 g i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546589 1 - 1977891 g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428339 1 + 7796314 g i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908465 1 - 74750902 g i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437464 1 + 17725628 g i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 54106 1 - 69927 g i aotNan1.NW_018503669v1 I 2002 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I a score=108140.000000 s hg38.chr3_KI270779v1_alt 100078 15 + 205312 ctgggatgacaggt--------g s panTro5.chr3 200083740 15 + 202621043 ctgggatgacaggt--------g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63353 15 + 190779 ctgggatgacaggt--------g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28267 15 + 106623 ctgggatgacaggt--------g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836412 15 + 123690457 ctgggatgacaggt--------g i nomLeu3.chr11 I 293 C 0 s rheMac8.chr2 202436722 15 + 204787373 ctgggattacaggc--------g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44527 15 + 192460366 ctgggattacaggc--------g i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519825 15 + 19675229 ctgggattacaggc--------g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454699 23 + 16847902 ctgggattacaggccccagcctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392187 15 - 91754291 ctgggattataggc--------g i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546590 15 - 1977891 ctgggattacaggc--------g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428340 15 + 7796314 ctgggattacaggc--------g i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908466 15 - 74750902 ctgggacaacaggc--------g i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437465 14 + 17725628 ct-gcataacaggt--------g i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 54107 15 - 69927 ctgggataacaggc--------g i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e mm10.chr16 65416131 1400 - 98207768 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I a score=111516.000000 s hg38.chr3_KI270779v1_alt 100093 13 + 205312 tgagccactg----cgc s panTro5.chr3 200083755 13 + 202621043 tgagccactg----cgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63368 13 + 190779 tgagccactg----cgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28282 13 + 106623 tgagccactg----cgc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836427 13 + 123690457 tgagccaccg----cgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436737 13 + 204787373 tgagccaccg----ccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44542 13 + 192460366 tgagccaccg----ccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519840 13 + 19675229 tgagccaccg----ccc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454722 13 + 16847902 tgagccaccg----ccc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392202 13 - 91754291 tgagccacca----cac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546605 13 - 1977891 tgagccaccg----ccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428355 13 + 7796314 tgagccaccg----cgc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908481 13 - 74750902 tgagccacca----cac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437479 13 + 17725628 tgagccacca----cac i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 54122 13 - 69927 tgagccacca----cac i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65417531 17 - 98207768 TGAGTCACTGTGGTTGC i mm10.chr16 I 1400 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e dasNov3.JH569502 3874689 1541 + 6579706 I e canFam3.chr33 29051866 1536 + 31377067 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I a score=58918.000000 s hg38.chr3_KI270779v1_alt 100106 11 + 205312 ccagccCTGA-T s panTro5.chr3 200083768 11 + 202621043 ccagccCTGA-T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63381 11 + 190779 ccagccCTGA-T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28295 11 + 106623 ccagccCTGA-T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836440 11 + 123690457 ccagccctga-t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436750 11 + 204787373 ccagccCTGA-T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44555 11 + 192460366 ccagccCTGA-T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519853 11 + 19675229 ccagccCTGA-T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454735 11 + 16847902 ccagccCTGA-T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392215 11 - 91754291 ccagccCTGA-T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546618 11 - 1977891 ccagccCTGA-T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428368 11 + 7796314 ccagccCTGA-T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908494 10 - 74750902 ctggcCCCAA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437492 10 + 17725628 ctggcCCCGA-- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 54135 11 - 69927 ctggcCCCGAG- i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65417548 6 - 98207768 ATTGCC------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29053402 11 + 31377067 CTGACCCACG-T i canFam3.chr33 I 1536 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e otoGar3.GL873829 399052 679 - 608964 I e dasNov3.JH569502 3874689 1541 + 6579706 I e cebCap1.NW_016107444v1 397638 2214 - 6778120 I a score=24805.000000 s hg38.chr3_KI270779v1_alt 100117 2 + 205312 TT s panTro5.chr3 200083779 2 + 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63392 2 + 190779 TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28306 2 + 106623 TT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836451 2 + 123690457 tt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436761 2 + 204787373 TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44566 2 + 192460366 TT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519864 2 + 19675229 TT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454746 2 + 16847902 TT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392226 2 - 91754291 TT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546629 2 - 1977891 TT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428379 2 + 7796314 TT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908504 2 - 74750902 TT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437502 2 + 17725628 TT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 399852 2 - 6778120 tt i cebCap1.NW_016107444v1 I 2214 C 0 s aotNan1.NW_018503669v1 54146 1 - 69927 -T i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 399731 2 - 608964 TT i otoGar3.GL873829 I 679 C 0 s mm10.chr16 65417554 2 - 98207768 TC i mm10.chr16 C 0 C 0 s canFam3.chr33 29053413 2 + 31377067 TC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I e dasNov3.JH569502 3874689 1541 + 6579706 I a score=97787.000000 s hg38.chr3_KI270779v1_alt 100119 8 + 205312 TCATCTTA s panTro5.chr3 200083781 8 + 202621043 TCGTCTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63394 8 + 190779 TCGTCTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28308 8 + 106623 TCATCTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836453 8 + 123690457 tCATCCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436763 8 + 204787373 TCATCTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44568 8 + 192460366 TCATCTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519866 8 + 19675229 TCATCTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454748 8 + 16847902 TCATCTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392228 8 - 91754291 TCATCTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546631 8 - 1977891 TCATCTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428381 8 + 7796314 TCATGTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908506 8 - 74750902 TCATCTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437504 8 + 17725628 TCATCTTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 399854 8 - 6778120 tCATCTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54147 8 - 69927 TCATCTTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 399733 8 - 608964 TCATCTTC i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65417556 7 - 98207768 TGGTCTT- i mm10.chr16 C 0 C 0 s canFam3.chr33 29053415 8 + 31377067 TCATCTCC i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3876230 8 + 6579706 TCTTCTTA i dasNov3.JH569502 I 1541 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I e micMur3.chr1 25883134 1703 - 114275543 I a score=160191.000000 s hg38.chr3_KI270779v1_alt 100127 11 + 205312 CTGTTCTCCAT s panTro5.chr3 200083789 11 + 202621043 CTGTTCTCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63402 11 + 190779 CTGTTCTCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28316 11 + 106623 CTGTTCTCCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836461 11 + 123690457 CTGTTCTCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436771 11 + 204787373 CTGTTCTCCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44576 11 + 192460366 CTGTTCTCCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519874 11 + 19675229 CTGTTCTCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454756 11 + 16847902 CTGTTCTCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392236 11 - 91754291 CTGTTCTCCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546639 11 - 1977891 CTGTTCTCCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428389 11 + 7796314 CTGTTCTCCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908514 11 - 74750902 CTGTCCTCCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437512 11 + 17725628 CTGTCCTCCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 399862 11 - 6778120 CTTTCCTCCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54155 11 - 69927 CTGTCCTCCAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25884837 11 - 114275543 CTGTTCTCAAC i micMur3.chr1 I 1703 C 0 s otoGar3.GL873829 399744 11 - 608964 TTATTCTCAAC i otoGar3.GL873829 I 3 C 0 s mm10.chr16 65417563 8 - 98207768 ---TTCTCAAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29053425 11 + 31377067 CTTTCCTAAAC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3876238 11 + 6579706 CTGTTCTCAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7402939 1161 + 22200726 I a score=2421658.000000 s hg38.chr3_KI270779v1_alt 100138 165 + 205312 TTGCAGGTGAAAATGGAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCTTCCCCGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGTGGGCACTTTCCGGGCCAGGGGAGTAGAGGAAGGGGCGAGGTTCGCAGGG-----GCTGCA-GGGAAG s panTro5.chr3 200083800 165 + 202621043 TTGCAGGTGAAAATGGAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCTTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGTGGGCACTTATCGGGCCAGGGGAGTAGAGGAAGGGGTGAGGTTCGCAGGG-----GCTGCA-GGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63413 165 + 190779 TTGCAGGTGAAAATGGAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCTTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGTGGGCACTTATCGGGCCAGGGGAGTAGAGGAAGGGGTGAGGTTCGCAGGG-----GCTGCA-GGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28327 164 + 106623 TTGCAGGTGAAAATGGAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCTTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGCCTGATGCAGCAGGTGAGTGGGCACTTTCCGGGCCAGGGGAGTAGAGGAAGGGGTGAGGTTCGCA-GG-----GCTGCA-GGGAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836472 165 + 123690457 TCGCAGGTGAAAATGGAGGCTTCCTTCTCCTGCGACTGAGTGTGGCCTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGCAGGCACTTTCCAGGCCAGGGCAGTAGAGGAAGGGGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436782 165 + 204787373 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCCAGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44587 165 + 192460366 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCCAGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 519885 165 + 19675229 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCCAGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454767 165 + 16847902 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCCGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCCAGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392247 165 - 91754291 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCACTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCCAGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546650 165 - 1977891 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCCAGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGG-----GCTGCC-GGGAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428400 165 + 7796314 TGGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCGCGGAAGACCTCACTGACCCCAGAGTGGCGGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGACCAGGGCAGTAGAGGAAGGGGTGAGGTTTGCAGGG-----GCTGCC-AGGAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908525 140 - 74750902 CTGCAGGTGAAAACGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCTGGAAGACCTCACTAATCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGT------------------------AGAGGAAGGTGTGAGGTTGGCAGGG-----G-TGCA-GGAAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437523 138 + 17725628 TTGCAGGTGAAAATGCAGGTTTCCTTCTCCTGAGGCTGAGTGTGGCCTCCCTGGAAGACCTCACCGACCCCAGAGTGGCAGAGAGGCTGGTGCAGGAGGTGAGT--------------------------AGGAAGGTGTGAGGTTCGCAGGG-----G-TGCA-GGAAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 399873 137 - 6778120 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAGAGCCTGGTGCAGCAGGTGAGT--------------------------AGGAAGCTGTGAGGTTCGCA-GG-----G-TGCA-GGAAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54166 140 - 69927 TTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGCGTGGCCTCCCTGGAAGACCTCACTGATCCCAGAGTGGCAGAGAGGCTGACGCAGCAGGTGAGT------------------------AGAGGGAGGTGCGAGGTTCGCAGGG-----G-TGCA-GGAAAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25884848 165 - 114275543 TTGCAGGTGGAGATGGAGGCTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCAGAAGACCTCACTGATCCCAGAGTGGCAGAGAGGTTCATGCAGCAGGTGAGTGGGCACTGTCTGGGCCAGGGCAGTGGAGGAAAGTGCGAGATCCCCAGGG-----ACTGCA-GGGGAG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7404100 165 + 22200726 TTGCAGGTGGAGATGGAGGCTTCCTCCTCCTGAGGCTGAGTGTGGTCTCCCCAGAAGACCTCACTGACCCCAGAGTGGCGGAGAGGTTCGTGCAGCAGGTGAGTGGGCACTGTCTGGGTCAGGGGAGTAGAGGAAAGTGCGAGGTTCTCAGGG-----ACTATA-GGGGAA i proCoq1.NW_012133858v1 I 1161 C 0 s otoGar3.GL873829 399755 171 - 608964 TTGCAGGTGGCAATGGAGGCTTCCTCCTTCTGCGGCTGAGTGTGGCCTCCCCAGAAGACCTCACCGACCCCAGAGTGGCAGAGAGGTTCATGTGGCAGGTGAGTGGGCATGTTCTGGACCAGCAGAGTAGAGGGAAGTGCGAGGTTCTCGGGGTGGGAGGTATAGGGGGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417571 148 - 98207768 TTTTAGGTGAAGATGGAGGCTTCCTCCTTGTACGGCTGACCGTGGCCTCCCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAAGCTGATGAACCAGGTACATGTACACC-----------------AGGAGTAAGTGAGGGTCTCTTGGGA-----ACTCCA-GGGAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29053436 133 + 31377067 CCGCAGATGGGGATGGAGGCTTTTTCCTCCTGCGGCTGAGTGTGGCCTCCCCAGAAGACCTCACTGACCCCAGAGTGGCAGAGAGGCTGGTGCAGCAGGTAAGGGAGCACTCTCGGGGCCAGGAA---AGAGGAAG----------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876249 155 + 6579706 TTGCTGGTGTGGATGAAGGCTTCCTCCTCCTGCAGCTGAGGGTAGCCACCCCAGAAGACCTCACTGACCCCAGAGTGGCAGAGAGGCTCATGCAGCAGGCAAGTGGATGC----------AGAGGAGTGGAGAAGCATGGGAGGTCCTTGGGG-----ATCCTA-GGGGAA i dasNov3.JH569502 C 0 C 0 a score=561959.000000 s hg38.chr3_KI270779v1_alt 100303 48 + 205312 ACCCGCAGGACACAGAAGAGCAGCTACCGCGCTTGGAAGGGAGTCTCG s panTro5.chr3 200083965 48 + 202621043 ACCCGCAGGACACAGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63578 48 + 190779 ACCCGCAGGACACAGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28491 48 + 106623 ACCCGCAGGACACAGAAAAGCAGCTACCGCACTTGGAAGGGAGTCTCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836637 48 + 123690457 ACCCGCAGGACACAGAAGAGCAGCTACCACATTTGGAAGGGAGTCTCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436947 48 + 204787373 ACCCGCGGGACACGGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44752 48 + 192460366 ACCCGCGGGACACGGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520050 48 + 19675229 ACCCGCGGGACACGGAATCGCAGCTACCGCACTTGGAAGGGAGTCTCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454932 48 + 16847902 ACCCGCGGGACACGGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392412 48 - 91754291 ACCCACGGGACACAGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546815 48 - 1977891 ACCCGCGGGACACGGAAGAGCAGCTGCCGCACTTGGAAGGGAGTCTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428565 48 + 7796314 ACCCACAGGACACAGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908665 47 - 74750902 GTCTGCGGGGCACAAAAGAGCAACCACTGCACATGGAAGGGAG-CTCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437661 48 + 17725628 ATGTGCCAGGCACAGGGGAGCAGCCGCTGCACTTGGAAGGGCGTCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400010 48 - 6778120 GTGTGCGGGGCACAAAGGAGCAGCCGCTACGCTTGGAAGGGAGTCTCG i cebCap1.NW_016107444v1 C 0 I 31 s aotNan1.NW_018503669v1 54306 47 - 69927 ATCTGCAGGGCACGGAAAAGCAACCACTACGCTTGGAAGGGAG-CTCG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885013 48 - 114275543 ACCTGCAGAACACAGAAGAGCAACTACGGCACTTGGGAGGGAGTCTTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7404265 48 + 22200726 ATCTGCAGACCACAGAAGAGCAACTACTACACTTGGGAGGGAGTCTTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 399926 47 - 608964 ATGTGCAGAACGCAGACGAGCAACTACTACAGGTGAG-GGCAGCCTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417719 43 - 98207768 ATCTTCAGGGCAAGGGAGGTCAATGACTCCA--TGAAAGGGCATT--- i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3876404 0 + 6579706 C e canFam3.chr33 29053569 0 + 31377067 C a score=254126.000000 s hg38.chr3_KI270779v1_alt 100351 34 + 205312 TTTCTTACGGAGAATTGGGAGCTGAATCTGAGG-A s panTro5.chr3 200084013 34 + 202621043 TTTCTTATGGAGAATTAGGAGCTGAATCTGAGG-A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63626 34 + 190779 TTTCTTATGGAGAATTAGGAGCTGAATCTGAGG-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28539 34 + 106623 TTTCTTGTGGAGAATTAGATGCTGAATCTGAGG-A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836685 34 + 123690457 TTTCTTACGGATAATTAGGAGCTGAATCTGAGG-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202436995 34 + 204787373 TTTCTTACAGAGAATTGGGAGCTGCATCGGAGG-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44800 34 + 192460366 TTTCTTACAGAGAATTGGGAGCTGCATCGGAGG-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520098 34 + 19675229 TTTCTTACAGAGAATTGGGAGCTGCATCGGAGG-A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 454980 34 + 16847902 TTTCTTACCGAGAATTGGGAGCTGAATCGGAGG-A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392460 34 - 91754291 TTTCTTACAGAGAATTGGGAGCTGAATCGGAGG-A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546863 34 - 1977891 TTTCTTACCGAGAATTGGGAGCTGAATCGGAGG-A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428613 34 + 7796314 TTTCTTACAGAGAATTAGGAGCTGAGTCGGAGG-A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908712 31 - 74750902 -CTCTTACAGAGAAGGAGG-CTTGGGAAGGAGG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437709 31 + 17725628 -TTCTCACAGAGAATGAGG-GTTGGGTCGGAGG-- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 54353 32 - 69927 -TTCTTACAGAGAGCGAGG-GCTGGGTCGGAGGA- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885061 34 - 114275543 TTTCTTATGGAGTAATAGGAGCTGAATTTTAGG-A i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7404313 34 + 22200726 TTTCTTATGGAGTAATAGGGGCTGAATTTTAGG-A i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 399973 34 - 608964 TTTCTTACGGAGCTTTAGGAGCTGAATTTCAGG-A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417762 16 - 98207768 -----------------AGGGCTGAACAGGGGC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29053569 18 + 31377067 --------CGAGTATTAGGAACTAAA--------- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3876404 0 + 6579706 C e cebCap1.NW_016107444v1 400058 31 - 6778120 I a score=563047.000000 s hg38.chr3_KI270779v1_alt 100385 50 + 205312 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-ATTT-CCT s panTro5.chr3 200084047 50 + 202621043 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-ATTT-CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63660 34 + 190779 TC----------------TCTGCCTGCCTTCTCCGAGTTCTTC-ATTT-CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28573 50 + 106623 TTTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-ATTT-CCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836719 48 + 123690457 TCTCTGCCTGGCTTTGCTTCTG--TGCCTTCTCCGAGTTCTTC-ATTT-CCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437029 50 + 204787373 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTTT-CCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44834 50 + 192460366 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTTT-CCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520132 50 + 19675229 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTTT-CCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 455014 47 + 16847902 TCTCTGCCTGGCTTTGCTTCTGC---CCTTCTCCGAGTTCTCC-GTTT-CCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392494 50 - 91754291 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCTGAGTTCTTC-GTTT-CCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546897 50 - 1977891 TCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTTT-CCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428647 50 + 7796314 TCTCTGCCTGGCTTTGCTTCTGTCTGCCTTCTCCGAGTTCTTC-ATTT-CCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908743 49 - 74750902 CCCCTGCCTGGC-TGGCTTCTGCCGGCCTTCTCCGAGCTCCTC-ATTT-CCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437740 48 + 17725628 CCCCTGCCTGGC-TGGCCTA-GCTGGCCTTCTCCGAGCCCCGC-ATTT-CCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400089 49 - 6778120 CCCCTGCCTGGC-TGGCTTCTGCCGGCCTTCTCCGAGCTCCAC-ATTT-CCT i cebCap1.NW_016107444v1 I 31 C 0 s aotNan1.NW_018503669v1 54385 48 - 69927 -CCCTGCCTGGC-TGGCTCCTGCCGGCCTTCTCCGAGCTCCTC-ATTT-CCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885095 51 - 114275543 TCCCGGCTTAGCTTTGCTTCTGCCTGTCTACTCTGAGTTCTTC-GTTCCCTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7404347 51 + 22200726 TCCCAGCCTAGTTTTGCTTCTGCCTGCATTCCCTGAGTTCTTC-ATTCACCT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 400007 50 - 608964 TCCCCGCTGAA-TTTGCTGCTGCCTGGCTTCTTTGATTTTTTC-ATTCCCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417778 48 - 98207768 -TCTTGCCTGGCTTTGATCTCGCCAAGCTTCTC--AGTTCTTCTGATC-TCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29053587 51 + 31377067 TATCTGCTTGGCTTGGCTTCTGCCTATTTTTCCTGAGTTGGGA-ATTCCCCT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3876404 0 + 6579706 C a score=262872.000000 s hg38.chr3_KI270779v1_alt 100435 17 + 205312 TCTCTGCAATGTAAACA- s panTro5.chr3 200084097 17 + 202621043 TCTCTGCAATGTAAACA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63694 17 + 190779 TCTCTGCAATGTAAACA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28623 17 + 106623 TCTCTGCAAGGTAAACA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836767 17 + 123690457 TCTCTGCAATGTAAACA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437079 17 + 204787373 TCTCTGCAGTGTAGACA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44884 17 + 192460366 TCTCTGCAGTGTAGACA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520182 17 + 19675229 TCTCTGCAGTGTAGACA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 455061 17 + 16847902 TCTCTGCAGTGTAAACA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392544 17 - 91754291 TCTCTGCAATGTAAACA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546947 17 - 1977891 TCTCTGCAGTGTAAACA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428697 17 + 7796314 TCTCTGTGGTGTAAACA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908792 17 - 74750902 TCTCTGCAATGTGAACA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437788 17 + 17725628 TCTTGGCAATGTAAACA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400138 17 - 6778120 TCTCTGCGATGTAAACA- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54433 17 - 69927 TTTCTGCGATGTGAACA- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885146 17 - 114275543 TCTCTGCAATGTAAACA- i micMur3.chr1 C 0 I 6 s proCoq1.NW_012133858v1 7404398 17 + 22200726 TCTCTGCAAAGTAAACA- i proCoq1.NW_012133858v1 C 0 I 336 s otoGar3.GL873829 400057 17 - 608964 TCTCTTCAGCGTAAACA- i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65417826 17 - 98207768 TTTCTGCCATGTGAATA- i mm10.chr16 C 0 I 2 s canFam3.chr33 29053638 17 + 31377067 TCTGTGCTACGTAAAAA- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876404 18 + 6579706 TCTTTGCAATGTGAAATT i dasNov3.JH569502 C 0 C 0 a score=15840.000000 s hg38.chr3_KI270779v1_alt 100452 7 + 205312 ----TGTGACT s panTro5.chr3 200084114 7 + 202621043 ----TGTGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63711 7 + 190779 ----TGTGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28640 7 + 106623 ----TGTGACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836784 7 + 123690457 ----CGTGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437096 7 + 204787373 ----CATGACT i rheMac8.chr2 C 0 I 21 s macFas5.chr2 44901 7 + 192460366 ----CATGACT i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 520199 7 + 19675229 ----CATGACT i macNem1.NW_012014355v1 C 0 I 21 s cerAty1.NW_012004056v1 455078 7 + 16847902 ----CATGACT i cerAty1.NW_012004056v1 C 0 I 1075 s chlSab2.chr15 392561 7 - 91754291 ----CATGACT i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 546964 7 - 1977891 ----CATGACT i manLeu1.NW_012102020v1 C 0 I 21 s colAng1.NW_012118932v1 428714 7 + 7796314 ----CATGACT i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 908809 7 - 74750902 ----CGCGACT i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 437805 7 + 17725628 ----CACGACT i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 400155 7 - 6778120 ----CACGACT i cebCap1.NW_016107444v1 C 0 I 2 s aotNan1.NW_018503669v1 54450 7 - 69927 ----CACGACT i aotNan1.NW_018503669v1 C 0 I 2 s micMur3.chr1 25885169 1 - 114275543 ----T------ i micMur3.chr1 I 6 I 2 s otoGar3.GL873829 400077 1 - 608964 ----T------ i otoGar3.GL873829 I 3 I 2 s mm10.chr16 65417845 6 - 98207768 ----TACATC- i mm10.chr16 I 2 I 2 s canFam3.chr33 29053655 4 + 31377067 -------GATT i canFam3.chr33 C 0 I 5 s dasNov3.JH569502 3876422 7 + 6579706 TTTTTGT---- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I a score=-23895.000000 s hg38.chr3_KI270779v1_alt 100459 5 + 205312 CCT--AG- s panTro5.chr3 200084121 5 + 202621043 CCT--GG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63718 5 + 190779 CCT--GG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28647 5 + 106623 CCT--GG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836791 5 + 123690457 GCC--GG- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 44909 5 + 192460366 CCCAA--- i macFas5.chr2 I 1 I 15 s chlSab2.chr15 392570 3 - 91754291 CCC----- i chlSab2.chr15 I 2 C 0 s colAng1.NW_012118932v1 428722 3 + 7796314 CCC----- i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 908818 3 - 74750902 CGC----- i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 437814 3 + 17725628 CAC----- i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 400164 3 - 6778120 CGC----- i cebCap1.NW_016107444v1 I 2 C 0 s aotNan1.NW_018503669v1 54459 3 - 69927 CGC----- i aotNan1.NW_018503669v1 I 2 C 0 s micMur3.chr1 25885172 3 - 114275543 CCT----- i micMur3.chr1 I 2 C 0 s otoGar3.GL873829 400080 3 - 608964 CCC----- i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65417853 3 - 98207768 CCC----- i mm10.chr16 I 2 C 0 s canFam3.chr33 29053664 3 + 31377067 CCT----- i canFam3.chr33 I 5 C 0 s dasNov3.JH569502 3876429 4 + 6579706 CCC----A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e macNem1.NW_012014355v1 520206 21 + 19675229 I e manLeu1.NW_012102020v1 546971 21 - 1977891 I e cerAty1.NW_012004056v1 455085 1075 + 16847902 I e rheMac8.chr2 202437103 21 + 204787373 I a score=764793.000000 s hg38.chr3_KI270779v1_alt 100464 66 + 205312 AGCCCCCAGT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCTCTGAGGCAAAGGTCAGTGATA s panTro5.chr3 200084126 66 + 202621043 AGCCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGCAAAGGTCAGTGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63723 66 + 190779 AGCCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGCAAAGGTCAGTGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28652 66 + 106623 AGCCCCCAGT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGCAAAGGTCAGTGATA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836796 66 + 123690457 AGCCCCCAAT----TTCTTCTGGTCCTGGGAAGCTT-GGCCTTCTGGCCCCTGAGGTGAAGGTCAGTGATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437124 64 + 204787373 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATA i rheMac8.chr2 I 21 C 0 s macFas5.chr2 44929 64 + 192460366 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATA i macFas5.chr2 I 15 C 0 s macNem1.NW_012014355v1 520227 64 + 19675229 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATA i macNem1.NW_012014355v1 I 21 C 0 s cerAty1.NW_012004056v1 456160 64 + 16847902 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATA i cerAty1.NW_012004056v1 I 1075 C 0 s chlSab2.chr15 392573 64 - 91754291 AACCCGCACT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCGGTGATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 546992 64 - 1977891 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATA i manLeu1.NW_012102020v1 I 21 C 0 s colAng1.NW_012118932v1 428725 66 + 7796314 AACCCCCGAT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGAGAAAGTCAGTGATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908821 65 - 74750902 -AACCCCAAC----TTCTTCCGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGAGATGGTCAGTGATA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437817 65 + 17725628 -AACCCCAAT----TCCTTCCGGTCCTCAGAAACCT-GGCCTTCTGGCCCCTGAGAAGAAGGTCAGTGACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400167 65 - 6778120 -AACCCCAAT----TTCTTCCGGTCCTTGGAAGCCT-GGCCCTCTGGCCCCTGAGCAGAAGGTCAGTGACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54462 65 - 69927 -AACCCCAGT----TTCTCCCGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGAGAAGGTCAGTGATA i aotNan1.NW_018503669v1 C 0 I 219 s micMur3.chr1 25885175 67 - 114275543 AATCCCCAAT----TTCCTTAGGTCCTAGGAAACTCTGGCCTTCAGGCCCCTGAGGAGAAGGTCAATGATA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 400083 61 - 608964 AAGCCCACAT----TTCTTTAGGTCCTAGGAAACTC------TCTGGTCCCTGAGGAGAAGGTCAGAGATA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417856 60 - 98207768 AGCCCCAGATCCAATTTTTCAGGTCTTGGGAGTGCA-GGCCTTTTG----------AAAGAGCCAATGATA i mm10.chr16 C 0 C 0 s canFam3.chr33 29053667 66 + 31377067 CGCCCCCAAT----TTCCTCAGGCCATAGGAAGTTCAGGCCTTCTATCCCTTG-GGAGAAGATCAATGATA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876433 26 + 6579706 --TCTCCAAT----TTTCTCAAGTCAAAAATA--------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I a score=569465.000000 s hg38.chr3_KI270779v1_alt 100530 45 + 205312 CTGATGGGAGGGTAGGTCggactcttggttgcaagtggcagaaac s panTro5.chr3 200084192 45 + 202621043 TTGATGGGAGGGtaggtgggactcttggttgcaagtggcagaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63789 45 + 190779 TTGATGGGAGGGtaggtgggactcttggttgcaagtggcagaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28718 44 + 106623 TTGATGGGAGGGTAGGTCggactcttggttgcaagt-gcagaaac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836862 45 + 123690457 TTGATGGGAGGGtaggccggactcttggttgcaagtggcagaaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437188 44 + 204787373 TTGATGGGAG-Gtaggcaggactcttggttgtaagtggcagaaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 44993 44 + 192460366 TTGATGGGAG-Gtaggcaggactcttggttgtaagtggcagaaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520291 44 + 19675229 TTGATGGGAG-Gtaggcaggactcttggttgtaagtggcagaaac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456224 45 + 16847902 TTGATGGGAGCGtaagcaggactcttggttgtaagtggcagaaac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392637 45 - 91754291 TTGATGGGAGAGtaggcaggactcttggctgtaagtggcagaaac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 547056 45 - 1977891 TTGATGGCAGAGtaggcaggactcttggttgtaagtggcagaaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428791 45 + 7796314 TTGATGGGAGGCtaggcaggactcttggttgtaagtggcagaaac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908886 44 - 74750902 -CGGAGGGACGGtaggcaggactcttggttgcaagtggcagaaac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437882 44 + 17725628 -TGGAGGGAGGGtaggcaggactcttggttgcaaatggcagaaac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400232 44 - 6778120 -CGGAGGGAGGGtaggcaggactcttggttgcaagtggcagaaac i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25885242 45 - 114275543 TTGATGGGCAGGtaggccggactcttggttgcaagtggcagaaac i micMur3.chr1 C 0 I 214 s otoGar3.GL873829 400144 45 - 608964 TTGATGGGCAGAtaggcaggactcttggttgcaagcggaagaaac i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417916 44 - 98207768 TTAATGGGAAAGTAAGCAGAGAtttgggttgcaagaagcaggaa- i mm10.chr16 C 0 C 0 s canFam3.chr33 29053733 44 + 31377067 TTAACGGGCAGAtaggcaggact-ttggttataaggagcagacac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876459 45 + 6579706 CTTATGGAGAGGTAAAcaggactcttggttgcaagcaacagaaac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e aotNan1.NW_018503669v1 54527 219 - 69927 I a score=115621.000000 s hg38.chr3_KI270779v1_alt 100575 27 + 205312 ccaagtcagggcagtttat--------gcaaaaaa s panTro5.chr3 200084237 27 + 202621043 ccaagtcagagaagtttat--------gcaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63834 27 + 190779 ccaagtcagagaagtttat--------gcaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28762 27 + 106623 ccaagtcagagcagtttat--------gccaaaaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836907 27 + 123690457 ccaagtcagagcagtttat--------gcaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437232 21 + 204787373 ccaagtcagagcagtttat--------g------a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45037 21 + 192460366 ccaagtcagagcagtttat--------g------a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520335 20 + 19675229 ccaagtcagagcagtttat--------g------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456269 23 + 16847902 ccaagtcagagcagtttat--------g----gga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392682 20 - 91754291 ccaagtcagagcagtttat--------g------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 547101 27 - 1977891 ccaagtcagagcagtttat--------gaaaaaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428836 25 + 7796314 ccaagtcagagcagtttat--------g--aagaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908930 19 - 74750902 ccaagttatagcattttat---------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437926 19 + 17725628 ccaCGTTATAGCATTTTAT---------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400276 27 - 6778120 ccaagttatagcattttatacaaaaaa-------- i cebCap1.NW_016107444v1 C 0 I 187 s otoGar3.GL873829 400189 19 - 608964 ctgagtca------tttac--------atgaaa-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417960 21 - 98207768 ccagggcatggtagtttac--------tt------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29053777 21 + 31377067 ccaactcatcgtagcttat--------ac------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876504 21 + 6579706 ccaactcacagtagctgac--------ac------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e aotNan1.NW_018503669v1 54527 219 - 69927 I a score=605737.000000 s hg38.chr3_KI270779v1_alt 100602 79 + 205312 aaaaaaaaaaaaaaaaaggcaaggtctgagaaacctacaagtgtc-------tcttc-agcttcag-ta-cggctggatccagcagctc s panTro5.chr3 200084264 66 + 202621043 aaaa-------------ggcagggtctgagaaacctagaagtgtc-------tcttc-agcttcag-ta-cggctggatccagcagctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63861 65 + 190779 aaa--------------ggcagggtctgagaaacctagaagtgtc-------tcttc-agcttcag-ta-cggctggatccagcagctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28789 79 + 106623 aaaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagtgtc-------tcttc-atcttcag-taccggctggatccagcagctc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120836934 79 + 123690457 aaaaaaaaaaaaaaaaaagcaaggtctgaggaacctagaagcttc-------tcttc-agcttcag-ta-cggctggatccagcagctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437253 78 + 204787373 aaaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagcatc-------tcctc-agcttcag-ta-tggctggatccggcaactc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45058 78 + 192460366 aaaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagcatc-------tcctc-agcttcag-ta-tggctggatccggcaactc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 520355 77 + 19675229 -aaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagcatc-------tcctc-agcttcag-ta-tggctggatccggcaactc i macNem1.NW_012014355v1 C 0 M 648 s cerAty1.NW_012004056v1 456292 78 + 16847902 aaaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagcgtc-------tcctc-agcttcag-ta-tggctggatccagcaactc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392702 76 - 91754291 --aaaaaaaaaaaaaa-ggcaaggtctaagaaacctagaagcatc-------tcctg-agcttcag-ta-tggctggatccggcaactc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 547128 78 - 1977891 aaaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagcatc-------tcctc-agcttcag-ta-tggctggatccagcaactc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 428861 78 + 7796314 aaaaaaaaaaaaaaaa-ggcaaggtctgagaaacctagaagcgtc-------tcctc-agcttcag-tg-tggctggatccggcagctc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 908949 74 - 74750902 ------acaaaaaaca-ggcaagctctgagaaacctggaagagtc-------tcttccaccttcagtta-tggctggaccctgcagctc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 437945 81 + 17725628 ------AGAAACAACA-GGCAGGGTCTGAGAAACCTAGAAGCTTCAGTTACGGCTTCTACCTTCAGTTA-CAGCTGGACCCTGCAGCTC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400208 54 - 608964 --------------------------tgagaaatctagaagtgcc-------tttcc-agcttcggtca-ttgctggatccagcagctc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65417981 70 - 98207768 ----------ggaaaa-gtcaaggtctgagaaatctacaggtggc-------tcctccagctttgg-agtcagctggagccagcagtgc i mm10.chr16 C 0 C 0 s canFam3.chr33 29053798 75 + 31377067 -----agaaaagggaa-ggtagtggctgagacacctagaagtgac-------tgttcaagcttcagttc-tggctggatccagcagctc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876525 75 + 6579706 -----agaaaggacaa-ggtactgactgagaaacttagaagtggt-------tcttgaagcttcagtta-tgttaggatccaggagctc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I a score=455464.000000 s hg38.chr3_KI270779v1_alt 100681 60 + 205312 cagcgccatcacagggactttctctttctttccctgtcttagctttactcccttcattct s panTro5.chr3 200084330 60 + 202621043 caatgccatcacggggactttctctttctctccctatcttagctctactcccttcattct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63926 60 + 190779 caatgccatcacggggactttctctttctctccctatcttagctctactcccttcattct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28868 60 + 106623 caacgccatcacggggactttctctttctctccctgtcttagctctactcccttcattct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837013 60 + 123690457 caacgcgatcacgggggctttctctttctctcgctgtcttagctctactcccttcATTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437331 60 + 204787373 aaacgtgatcacggggattttctctttctctccccatcttagctctactcccttcATTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45136 60 + 192460366 aaacgtgatcacggggattttctctttctctccccgtcttagctctactcccttcATTCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456370 60 + 16847902 aaacctgatcacggggattttctctttctctccctgtcttagctctactcccttcattct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392778 60 - 91754291 aaacgcgatcacggggattttctctttctctccctgtcttagctcaactcccttcATTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 547206 60 - 1977891 aaacgcgatcacggggattttctctttctctccccgtcttagctctactcccttcATTCT i manLeu1.NW_012102020v1 C 0 I 3322 s colAng1.NW_012118932v1 428939 60 + 7796314 aaacacgatcgcggggattttctctttctctccctgtcttagctctactcccttcattct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909023 58 - 74750902 agatgtggccgtgggga--ttttctttctctccctgcctcagctgtactccctttattct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438026 56 + 17725628 AGACGTGGCCATGGGG----TTTCTTTCTCTGCCTGCCTTAGCTGTACGTCCTTCATTCT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400262 44 - 608964 agatacaatcatgggg-tttcctctttct--------cttagctctgctccct------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65418051 53 - 98207768 aaacacaatcat-gagatttcctctgtccca------ctcagctctgtgcccttcattct i mm10.chr16 C 0 C 0 s canFam3.chr33 29053873 53 + 31377067 agatgcgctcatccgggttttctctttctttacctctcttagct-------ctTCGTTGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876600 60 + 6579706 agatatgaccgtcaggattttctctttctcttcctctcttggctctactcccctcattct i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M a score=161039.000000 s hg38.chr3_KI270779v1_alt 100741 24 + 205312 tcagagtctttcttcatgtgtatg s panTro5.chr3 200084390 24 + 202621043 tcagagtctttcttcatatgtatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 63986 24 + 190779 tcagagtctttcttcatatgtatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28928 24 + 106623 tcagagtctttcttcatatgtatg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837073 22 + 123690457 T--GAGTCTTTCTTCATATGTATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437391 24 + 204787373 TCAGAGTCTTTCTTTATATGTATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45196 24 + 192460366 TCAGAGTCTTTCTTTATATGTATG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456430 24 + 16847902 ccagagtcgttcctcatatgTATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392838 24 - 91754291 TCAGAGTCTTTCTTCATATGTATG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 428999 24 + 7796314 tcagagtctttcttcacatgTATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909081 22 - 74750902 --tcagtctTTCTTCATGCATATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438082 22 + 17725628 --TCAGTCTTTCTTCATACGTATG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400306 18 - 608964 ------tctTTTTCCACATGTACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65418104 24 - 98207768 tcatggactttctccaTACATATG i mm10.chr16 C 0 I 1147 s canFam3.chr33 29053926 24 + 31377067 TCAGAATCTCTCTCCATATGTAAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876660 22 + 6579706 --atggcatctctccacatATAAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=75031.000000 s hg38.chr3_KI270779v1_alt 100765 10 + 205312 aaaaggcagc s panTro5.chr3 200084414 10 + 202621043 aaaaggcagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64010 10 + 190779 aaaaggcagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28952 10 + 106623 aaaaggcagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837095 10 + 123690457 AAAAGGCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437415 10 + 204787373 AAAAGGCAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45220 10 + 192460366 AAAAGGCAGC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456454 10 + 16847902 AAAAGGCAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392862 10 - 91754291 AAAAGGCAGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429023 10 + 7796314 AAAAGCCAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909103 10 - 74750902 AAAAGGCGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438104 10 + 17725628 AAAACGCGGC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400324 10 - 608964 GAAAGGTGAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29053950 10 + 31377067 GAAAGTTGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876682 10 + 6579706 GAAAGGTAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e mm10.chr16 65418128 1147 - 98207768 I e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=170867.000000 s hg38.chr3_KI270779v1_alt 100775 27 + 205312 cTTGTTAGCCATAGATTCACAAGGGAC s panTro5.chr3 200084424 27 + 202621043 cTTGTTAGCCATAGATTCACAAGGGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64020 27 + 190779 cTTGTTAGCCATAGATTCACAAGGGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28962 27 + 106623 cTTGTTAGCCATAGATTCACAAGGGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837105 27 + 123690457 CTTGTTAGCCGTAGATTCACAAGGCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437425 27 + 204787373 TTTGTTAGCCATAGATTCACAAGGCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45230 27 + 192460366 TTTGTTAGCCATAGATTCACAAGGCAC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456464 27 + 16847902 TTTGTTAGCCATAGATTCAAAAGGCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392872 27 - 91754291 CTTGTTAGCCATAGATTCACAAGGCAC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429033 27 + 7796314 CTTGTTAGCCATAGATTCACAAGGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909113 27 - 74750902 CTTGTTAGCCCTAGATTCACGAGGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438114 27 + 17725628 CTTGTTAGCCCTAGATTCACAAGGCAC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400334 27 - 608964 TGTGATAGCCCTAGATTCATAAGGCAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29053960 24 + 31377067 TGTGACAGCCC--GAGTCAT-AGGCAC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e mm10.chr16 65418128 1147 - 98207768 I e dasNov3.JH569502 3876692 0 + 6579706 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=11736.000000 s hg38.chr3_KI270779v1_alt 100802 2 + 205312 TT s panTro5.chr3 200084451 2 + 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64047 2 + 190779 TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28989 2 + 106623 TT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837132 2 + 123690457 TT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437452 2 + 204787373 TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45257 2 + 192460366 TT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456491 2 + 16847902 TT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392899 2 - 91754291 TT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429060 2 + 7796314 TT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909140 2 - 74750902 TT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438141 2 + 17725628 TT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400361 2 - 608964 GT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e mm10.chr16 65418128 1147 - 98207768 I e dasNov3.JH569502 3876692 0 + 6579706 C e canFam3.chr33 29053984 0 + 31377067 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=13200.000000 s hg38.chr3_KI270779v1_alt 100804 2 + 205312 CC s panTro5.chr3 200084453 2 + 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64049 2 + 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28991 2 + 106623 CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837134 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437454 2 + 204787373 CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45259 2 + 192460366 CC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456493 2 + 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392901 2 - 91754291 CC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429062 2 + 7796314 CC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909142 2 - 74750902 CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438143 2 + 17725628 CC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e otoGar3.GL873829 400363 0 - 608964 C e mm10.chr16 65418128 1147 - 98207768 I e dasNov3.JH569502 3876692 0 + 6579706 C e canFam3.chr33 29053984 0 + 31377067 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=294744.000000 s hg38.chr3_KI270779v1_alt 100806 96 + 205312 ATCTCCCCACATTTTCT-----TTTCTTTtttctttttctttctttc---tttttgttttttgagacgaagtctcgctctgtcgcccaggctggagtgcagtgg s panTro5.chr3 200084455 96 + 202621043 ATCTCCCCAAATTTTCT-----TCTCTTTtttctttttctttctttc---tttttgttttttgagacgaagtctcgctctgtcacccaggctggagtgcagtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64051 94 + 190779 ATCTCCCCAAATTTTCT-----TTTCTtttt--cttttctttctttc---tttttgttttttgagacgaagtctcgctctgtcacccaggctggagtgcagtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 28993 96 + 106623 ATCTCCCCAAATTTTCT-----TTTCTTTtttctttttctttctttc---tttttgttttttgagatgaagtctcgctctgtcgcccaggctggagtgcagtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837136 102 + 123690457 CTCTCCCCAAATTTTCTTTTCCTTTCTTTTttctgtttctttctttc--tttttttttttttgagacaaagtctcgctctgttgcccaggctggagtgcagtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437456 86 + 204787373 CTCTCCCCAACTTTTCt-----tctc----------ttctctctctc---tttttttttcttgagatgaagtctcgctctgttgcccaggctggagtgcagtgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45261 86 + 192460366 CTCTCCCCAACTTTTCt-----tttc----------ttctctctctc---tttttttttcttgagatgaagtctcgctctgttgcccaggctggagtgcagtgg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456495 86 + 16847902 CTCTCCCCAACTTTtct-----tttc----------ttctctctctc---tttttttttcttgagatgaagtctcgctctgttgcccaggctggagtgcagtgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392903 85 - 91754291 CTCTCCCCAACTTttct-----tttc----------ttctctctctc----ttttttttcttgagatgaagtctcgctctgtcgccgaggctggagtgcagtgg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429064 89 + 7796314 CTCTCCCCAAATTTTCT-----tttc----------ttttctctctctctttttctttttttgagacgaagtctcgctctgtcacccaggctggagtgcagtgg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e otoGar3.GL873829 400363 0 - 608964 C e mm10.chr16 65418128 1147 - 98207768 I e dasNov3.JH569502 3876692 0 + 6579706 C e canFam3.chr33 29053984 0 + 31377067 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e calJac3.chr17 909144 0 - 74750902 C e saiBol1.JH378146 438145 0 + 17725628 C e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=706036.000000 s hg38.chr3_KI270779v1_alt 100902 210 + 205312 tgcgatctcagctcactgcaagctccgcctcctgggttcacgc-cattctcctgcctcagcctccc-aagtagctgggactacaggcgcccgccaccacgcccaactaa-tttttatgtttttttttttagtagagacggggtttcaccgtgttagccagaatagtctcaatctcctgacctcgtgatccacccgtcttggcctcccaaagtg s panTro5.chr3 200084551 209 + 202621043 cgcgatctcagctcactgcaagctccgcctcctgggttcacgc-cattctcctgcctcagcctccc-aagtagctgggactacaggcgcccaccaccacgcccgactaa-tttttatgtatttttttt-agtagagacggggtttcaccgtgttagccaggatagtctcaatctcctgacctcgtgatccacccgtcttggcctcccaaagtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64145 209 + 190779 cgcgatctcagctcactgcaagctccgcctcctgggttcacgc-cattctcctgcctcagcctccc-aagtagctggggctacaggcgcccaccaccacgcccgactaa-tttttatgtatttttttt-agtagagacggggtttcaccgtgttagccaggatagtctcaatctcctgacctcgtgatccacccgtcttggcctcccaaagtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29089 208 + 106623 cgcgatctcagctcactgcaagctccgcttcctgggttcacgc-cattctcctgcctcagcctccc-aagtagctgggactacaggcacccgccaccacg-ccgactaa-tttttatgtatttttttttagtagagac-gggtttcaccgtgttagccaggatagtctcaatctcctgacctcgtgatccacccgtcttggcctcccaaagtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837238 209 + 123690457 cacaatctcagctcattgcaagctccgcctcccaggttcacgc-cattctcctgcctcagcctccc-cagtagctgggactacaggcgcccgccaccacacccggctat-tttttttgtatttttttt-agtagagacggggtttcaccgtgttagccaggatagtctcgatctcctgacctcgtgatctgcccgtcttggcctcccaaagtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437542 209 + 204787373 tgtgacctcgactcactgcaagctccgcctcccgggttcacgc-cattctcctgcctcagcccccccgagtagctgggactacaggcg-ccgccaccacgcctggctaattttttttgtattttttt--agtagagacggggtttcaccgtgttagccaagatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45347 208 + 192460366 tgtgacctcgactcactgcaagctccgcctcccgggttcacgc-cattctcctgcctcagcccccccgagtagctgggactacaggcg-ccgccaccacgcctggctaa-tttttttgtattttttt--agtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 456581 208 + 16847902 tgtgacctcggctcactgcaagctccgcctcccgggttcacgc-cattctcctgcctcagcctccctgagtagctgggactacaggcg-ccgccaccacgcctggctaa-tttttttgtattttttt--agtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 392988 208 - 91754291 tgtgacctcggctcactgcaagctctgcctcccgggttcacgc-cattttcctgcctcagcctccccgagtagctgggactacaggcg-ccgccaccacgcctggctaa-tttttttgtattttttt--agtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctcatgatttgcccatctcggcctcccaaagtg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429153 208 + 7796314 tgtgatcttggctcactgcaagctctgcctcccgggttcacgc-cattttcctgcctcagcctccc-gggtagctgggactacaggtgcccgccaccagggccggctaa-tttttttgtattttttt--agtacagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtg i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3876692 53 + 6579706 TGTGATTCCAGCTTA--GCAACCTCAGC-----GAAGAAACGCACATTCATCTCCCAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e otoGar3.GL873829 400363 0 - 608964 C e mm10.chr16 65418128 1147 - 98207768 I e canFam3.chr33 29053984 0 + 31377067 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e macNem1.NW_012014355v1 520432 648 + 19675229 M e calJac3.chr17 909144 0 - 74750902 C e saiBol1.JH378146 438145 0 + 17725628 C e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=136204.000000 s hg38.chr3_KI270779v1_alt 101112 32 + 205312 ctgggattacagacatgagccaccgcacccgg s panTro5.chr3 200084760 32 + 202621043 ctgggattacagacatgagccaccgcgtccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64354 32 + 190779 ctgggattacagacatgagccaccgcgtccgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29297 32 + 106623 ctgggattacagacatgagccaccgcgtccgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837447 32 + 123690457 ctgggattacaggcatgagccaccgcgcccgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437751 32 + 204787373 ctgggattacaggtgtgagccaccacgcctgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45555 32 + 192460366 ctgggattacaggtgtgagccaccacgcctgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521091 32 + 19675229 ctgggattacaggtgtgagccaccacgcctgg i macNem1.NW_012014355v1 M 648 C 0 s cerAty1.NW_012004056v1 456789 32 + 16847902 ctgggattacaggtgtgagccaccacgcctgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393196 32 - 91754291 ctgggattacaggcgtgagccactgcgcctgg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429361 32 + 7796314 ctgggattacaggcttgagccaccgcgcccgg i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3876745 15 + 6579706 -------TCCACACATAACACA---------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e otoGar3.GL873829 400363 0 - 608964 C e mm10.chr16 65418128 1147 - 98207768 I e canFam3.chr33 29053984 0 + 31377067 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e calJac3.chr17 909144 0 - 74750902 C e saiBol1.JH378146 438145 0 + 17725628 C e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=5020.000000 s hg38.chr3_KI270779v1_alt 101144 2 + 205312 cc s panTro5.chr3 200084792 2 + 202621043 cc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64386 2 + 190779 cc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29329 2 + 106623 cc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837479 2 + 123690457 cc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437783 2 + 204787373 GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45587 2 + 192460366 GC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521123 2 + 19675229 GC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456821 2 + 16847902 GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393228 2 - 91754291 GC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429393 2 + 7796314 GC i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29053984 1 + 31377067 -C i canFam3.chr33 C 0 I 1 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e otoGar3.GL873829 400363 0 - 608964 C e mm10.chr16 65418128 1147 - 98207768 I e dasNov3.JH569502 3876760 0 + 6579706 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e calJac3.chr17 909144 0 - 74750902 C e saiBol1.JH378146 438145 0 + 17725628 C e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=24246.000000 s hg38.chr3_KI270779v1_alt 101146 4 + 205312 CCCT s panTro5.chr3 200084794 4 + 202621043 CCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64388 4 + 190779 CCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29331 3 + 106623 CCC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837481 4 + 123690457 CCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437785 4 + 204787373 CCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45589 4 + 192460366 CCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521125 4 + 19675229 CCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456823 4 + 16847902 CCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393230 4 - 91754291 CCCT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429395 4 + 7796314 CCCT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 400363 4 - 608964 CCCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29053986 4 + 31377067 CCCT i canFam3.chr33 I 1 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e mm10.chr16 65418128 1147 - 98207768 I e dasNov3.JH569502 3876760 0 + 6579706 C e aotNan1.NW_018503669v1 54527 219 - 69927 I e cebCap1.NW_016107444v1 400303 187 - 6778120 I e calJac3.chr17 909144 0 - 74750902 C e saiBol1.JH378146 438145 0 + 17725628 C e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=368202.000000 s hg38.chr3_KI270779v1_alt 101150 42 + 205312 CTCCCCAAATTTTCATGTCAT-CTGGGGAAG-------TGCAGGTCTCCA s panTro5.chr3 200084798 42 + 202621043 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------CGCAGGTCTCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64392 42 + 190779 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------CGCAGGTCTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29334 42 + 106623 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------CGCAGGTCTCCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837485 42 + 123690457 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------AGCAGGTCTCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437789 42 + 204787373 CTCCCCTAATTTTCATGTCAT-CCGGGGAAG-------GGCAGGTCTCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45593 42 + 192460366 CTCCCCTAATTTTCATGTCAT-CCGGGGAAG-------GGCAGGTCTCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521129 42 + 19675229 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------GGCAGGTCTCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456827 42 + 16847902 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------GGCAGGTCTCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393234 42 - 91754291 GTCCCCAAATTTTCATGTCAT-CCAGGGAAG-------GGCAGGTCTCCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429399 42 + 7796314 CTCCCCAAATTTTCATGTCAT-CTGGGGCAG-------GGCAGGTCTCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909144 42 - 74750902 CTCCCCAAATTTTCATGTCAC-CCAGGGAAG-------GAAAGGTCTCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438145 42 + 17725628 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------GACAGGTCTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400490 42 - 6778120 CTCCCCAAATTTTCATGTCAT-CCGGGGAAG-------GACAGGTCTTCT i cebCap1.NW_016107444v1 I 187 C 0 s aotNan1.NW_018503669v1 54746 42 - 69927 CTCCCCACATTCTCATGTCAT-CCGGGGAAG-------GACAGGTCTCCT i aotNan1.NW_018503669v1 I 219 C 0 s otoGar3.GL873829 400367 45 - 608964 GTCTCAAAATTTGTATATCA-----GATAAGTCCTTCTGACTTGTCTCAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29053990 43 + 31377067 CTCCCAAGATCTGCATATTATACTAGGGAAA-------GACTGATCTTAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876760 17 + 6579706 -------------------------GGGAAG-------GACT-GTCTCAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404415 336 + 22200726 I e micMur3.chr1 25885287 214 - 114275543 I e mm10.chr16 65418128 1147 - 98207768 I e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=174720.000000 s hg38.chr3_KI270779v1_alt 101192 12 + 205312 TGGCCTGCAAGG s panTro5.chr3 200084840 12 + 202621043 TGGCCTGCAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64434 12 + 190779 AGGCCTGCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29376 12 + 106623 TGGCCTGCAAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837527 12 + 123690457 TGGCCTGTAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437831 12 + 204787373 TGGCCTGCAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45635 12 + 192460366 TGGCCTGCAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521171 12 + 19675229 TGGCCTGCAAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456869 12 + 16847902 TGGCCTGCAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393276 12 - 91754291 TGGCCTGCAAGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429441 12 + 7796314 TGGCCTGCCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909186 12 - 74750902 TAGCCTGGAAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438187 12 + 17725628 TAGCCTGGAAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400532 12 - 6778120 CAGCCTGGAAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54788 12 - 69927 TAGCCTGGAAGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885501 12 - 114275543 TGGCCTGCAAAG i micMur3.chr1 I 214 C 0 s proCoq1.NW_012133858v1 7404751 12 + 22200726 TGGCCTGCAAGG i proCoq1.NW_012133858v1 I 336 C 0 s otoGar3.GL873829 400412 12 - 608964 TGGCTTTCAAGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29054033 12 + 31377067 TGGTCTGCAAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876777 12 + 6579706 TGGCCTGCAAGG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65418128 1147 - 98207768 I e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=623195.000000 s hg38.chr3_KI270779v1_alt 101204 53 + 205312 GTCACCA----------------------------------------------------------------------------------------------TGACTGACAACCCAGTCAGGATCCCATA-GA---GGAAGGATGAGCCCCA s panTro5.chr3 200084852 53 + 202621043 GTCACCA----------------------------------------------------------------------------------------------TGACTGACAACCCAGTCAGGATCCCATA-GA---GGAAGGATGAGCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64446 53 + 190779 GTCACCA----------------------------------------------------------------------------------------------TGACTGACAACCCAGTCAGGATCCCATA-GA---GGAAGGATGAGCCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29388 53 + 106623 GTCACCA----------------------------------------------------------------------------------------------TGACTGACAACCCAGTCAGGATCCCATA-GA---GGAAGGATGAGCCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837539 54 + 123690457 GTCACCA----------------------------------------------------------------------------------------------TGACTGACAACCCAATCAGGATCCCACAGGA---GGAAGGATGGGCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437843 53 + 204787373 GCCATCA----------------------------------------------------------------------------------------------CGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGACGAGCCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45647 53 + 192460366 GCCATCA----------------------------------------------------------------------------------------------CGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGACGAGCCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521183 53 + 19675229 GCCATCA----------------------------------------------------------------------------------------------CGACTGACTACCCAATCAGGATCCCATA-GA---GGAAGGACGAGCCCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456881 53 + 16847902 GCCATCA----------------------------------------------------------------------------------------------CGACTGACAACCCAATCAGGATCCCATA-AA---GGAAGGACGAGCCCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393288 53 - 91754291 GCCACCA----------------------------------------------------------------------------------------------CGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGATGAGCCCCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 429453 53 + 7796314 GCCACCA----------------------------------------------------------------------------------------------TGACTGACAGCCCAATCAGGATCCCATA-GA---GGAAGGACGAGCCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909198 147 - 74750902 GCCACTTATCCTGGTTCTCACCAGGAGGTGTCGCACTGCCTCCCACCCTGTGTCTGCTTCCCACTAAAAGAAGAAAGCAATTAAAAAACAAACCAAAAAACTGACTGACAACCCAATCAGGGTCCCACA-GA---GGAAGGATGAGCCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438199 53 + 17725628 GCCACCG----------------------------------------------------------------------------------------------TGACTGACAACCCAATCCGGGTCCCGTA-GA---GGAAGGACGAGCCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400544 53 - 6778120 GCCACCG----------------------------------------------------------------------------------------------TGACTGACAACCTAATCAGGGTCCCACA-GA---GGAAGGATGAGCCCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54800 53 - 69927 GCCACCG----------------------------------------------------------------------------------------------TAACTGACAACCCAGTCAGGGTCCCATA-GA---GGAAGGATGAGCCCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885513 55 - 114275543 GCCACCA----------------------------------------------------------------------------------------------TGACTGACAGCCAAATCAGGACCACATA-GAATGGCAAGGATGGGCCC-A i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7404763 56 + 22200726 GCCACCA----------------------------------------------------------------------------------------------TGACTGACAGCCAAATCAGGACCACACA-GAATGGGAAGGATGGGCCCTA i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 400424 56 - 608964 GCCGCCA----------------------------------------------------------------------------------------------TGACTGACAGCCAAATCAGGACCACATA-GGATGGGAAGGATGGACCCCA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65419275 46 - 98207768 GCCACTG----------------------------------------------------------------------------------------------TGATTTACATCTCAA--AACACATCATA-AATGGGAAAAGAC-------- i mm10.chr16 I 1147 C 0 s canFam3.chr33 29054045 56 + 31377067 GCCACCA----------------------------------------------------------------------------------------------TGACTGACAGCTCAAAATGAACCACGTG-GAATGAGAAGGACAGGCCTCA i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3876789 56 + 6579706 GCCACTG----------------------------------------------------------------------------------------------TGACTAACAACCCAACCACGACCACATG-GAGTAGGCAGGACAGTCCCCA i dasNov3.JH569502 C 0 C 0 e manLeu1.NW_012102020v1 547266 3322 - 1977891 I a score=325518.000000 s hg38.chr3_KI270779v1_alt 101257 28 + 205312 -AGAAAATAGGGAGGCTAGGCAG-----AAAAAA-- s panTro5.chr3 200084905 28 + 202621043 -AGAAAATAGGGAGGCCAGGCAG-----AAAAAA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64499 28 + 190779 -AGAAAATAGGGAGGCCAGGCAG-----AAAAAA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29441 28 + 106623 -AGAAAATAGGGAGGCTAGGCAG-----AAAAAA-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837593 28 + 123690457 -AGAACATAGGGAGGCTGGGCAG-----AAAAAT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437896 27 + 204787373 -AGAAAACAGGGAGGCTAGGCAG-----AAAAA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45700 27 + 192460366 -AGAAAACAGGGAGGCTAGGCAG-----AAAAA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521236 27 + 19675229 -AGAAAACAGGGAGGCTAGACAA-----AAAAA--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456934 27 + 16847902 -AGAAAACAGAGAGGCTAGGCAG-----AAAAA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393341 27 - 91754291 -AGAAAACAGGGAGGCTAGGCAG-----AAAAA--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550588 27 - 1977891 -AGAAAACAGGGAGGCTAGGCAG-----AAAAA--- i manLeu1.NW_012102020v1 I 3322 C 0 s colAng1.NW_012118932v1 429506 27 + 7796314 -AGAAAACAGGGAGGCTGGGCAG-----AAAAA--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909345 27 - 74750902 -AGGAAAGCGGGAGGTGAAGCAG-----AAGAA--- i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 438252 27 + 17725628 -GGGAACGTGGGAGGCGAGGCAG-----AAGAA--- i saiBol1.JH378146 C 0 I 3 s cebCap1.NW_016107444v1 400597 27 - 6778120 -AGGAACGTGGGAGGTGAGGCAG-----AAGAA--- i cebCap1.NW_016107444v1 C 0 I 3 s aotNan1.NW_018503669v1 54853 27 - 69927 -AGGAAAGTGGGAGGCCAGGCAG-----AAGAA--- i aotNan1.NW_018503669v1 C 0 I 49 s micMur3.chr1 25885569 27 - 114275543 -AGAAAACAGGGATGCTAGACAA-----AAAAA--- i micMur3.chr1 I 1 I 1 s proCoq1.NW_012133858v1 7404820 27 + 22200726 -AGAAAATAGGGATGCTAGACAG-----AAAAA--- i proCoq1.NW_012133858v1 I 1 I 1 s otoGar3.GL873829 400481 32 - 608964 -AGGAAATAGAGATGGTAGGCAGAAAAAAAAAA--- i otoGar3.GL873829 I 1 I 1 s mm10.chr16 65419321 27 - 98207768 -ATGAAATAGGGATGCTAGATAT-----AAAAC--- i mm10.chr16 C 0 I 1 s canFam3.chr33 29054102 27 + 31377067 -AGGCGCTGGGGATGCCAGGCAG-----AAAAT--- i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3876845 29 + 6579706 AAGGAAATAGAG-GACTGGACAG-----GAAAA-AA i dasNov3.JH569502 C 0 C 0 a score=16541.000000 s hg38.chr3_KI270779v1_alt 101285 2 + 205312 -CC s panTro5.chr3 200084933 2 + 202621043 -CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64527 2 + 190779 -CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29469 2 + 106623 -CC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837621 2 + 123690457 -CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437923 2 + 204787373 -CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45727 2 + 192460366 -CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521263 2 + 19675229 -CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456961 2 + 16847902 -CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393368 2 - 91754291 -CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550615 2 - 1977891 -CC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429533 2 + 7796314 -CC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909375 2 - 74750902 -GC i calJac3.chr17 I 3 C 0 s saiBol1.JH378146 438282 2 + 17725628 -AC i saiBol1.JH378146 I 3 C 0 s cebCap1.NW_016107444v1 400627 2 - 6778120 -AC i cebCap1.NW_016107444v1 I 3 C 0 s micMur3.chr1 25885597 2 - 114275543 -CC i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 7404848 2 + 22200726 -CC i proCoq1.NW_012133858v1 I 1 I 242 s otoGar3.GL873829 400514 2 - 608964 -CC i otoGar3.GL873829 I 1 I 2 s mm10.chr16 65419349 2 - 98207768 -CC i mm10.chr16 I 1 C 0 s canFam3.chr33 29054130 2 + 31377067 -CC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3876874 2 + 6579706 AT- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 54880 49 - 69927 I a score=494064.000000 s hg38.chr3_KI270779v1_alt 101287 44 + 205312 GCAGAGATGTATACTCTAGATGAGGACCATGATTGGGATGTATT s panTro5.chr3 200084935 44 + 202621043 CCAGAGATGTATACTCTAGATGAGGACCATGATTGGGATGTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64529 44 + 190779 CCAGAGATGTATACTGTAGATGAGGACCATGATTGGGATGTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29471 44 + 106623 CCAGAGATGTATACTCTAGATGAGGACCATGATTGGGATGTATT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837623 44 + 123690457 CCAGAGATGGGCACTGTAGATGAGGACCATGACTGGGATGTATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437925 44 + 204787373 CCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45729 44 + 192460366 CCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521265 44 + 19675229 CCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 456963 44 + 16847902 CCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393370 44 - 91754291 CCAGAGATGTACACTCTAGATGAGGACCAAGATTGGGAGGCATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550617 44 - 1977891 CCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429535 44 + 7796314 CCAGGGACGTACACTCCAGATGAGGACCAAGACTGGGATGCGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909377 44 - 74750902 CCATAGATGTACACTCCAGATGGGGACGGAGATTGGGATGGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438284 44 + 17725628 CCACAGGTGTGCACTCCAGGTGGGGACCGAGATTGGGGAGTGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400629 44 - 6778120 CCATAGATGTGCACTCCAGATGGGGACCAAGACTGGGATGTAGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25885599 42 - 114275543 CCATAGATATGTGCTCTAGATAGAGACCAAGATTGGGATATT-- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 400518 42 - 608964 GTATAGATATATGCTCTAGATAGAGACCAAGATTGGGACATA-- i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65419351 42 - 98207768 --TTGGAGATATGCTCCAGGCAAAGAGGAAGATTGTGGTGTCTT i mm10.chr16 C 0 I 2 s canFam3.chr33 29054132 43 + 31377067 -CATGGATGCATGTTCTAGATGAGGACCAAGATTGGGACATATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876876 44 + 6579706 CCATACATGTACACTCTAGATGAGGACCAAGATTGGGTTGTATT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e aotNan1.NW_018503669v1 54880 49 - 69927 I a score=98294.000000 s hg38.chr3_KI270779v1_alt 101331 7 + 205312 TGTACAA s panTro5.chr3 200084979 7 + 202621043 TGTACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64573 7 + 190779 TGTACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29515 7 + 106623 TGTACAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837667 7 + 123690457 TGCACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437969 7 + 204787373 TGTACAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45773 7 + 192460366 TGTACAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521309 7 + 19675229 TGTACAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457007 7 + 16847902 TGTACAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393414 7 - 91754291 TGTACAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550661 7 - 1977891 TGTACAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429579 7 + 7796314 TGTACAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909421 7 - 74750902 TATACAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438328 7 + 17725628 GGTGCAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400673 7 - 6778120 TGTGCAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54929 7 - 69927 TGTGCAA i aotNan1.NW_018503669v1 I 49 C 0 s micMur3.chr1 25885641 7 - 114275543 TGTACAA i micMur3.chr1 C 0 I 194 s otoGar3.GL873829 400560 7 - 608964 TTTACAC i otoGar3.GL873829 C 0 I 4 s mm10.chr16 65419395 7 - 98207768 AATACCA i mm10.chr16 I 2 I 1 s canFam3.chr33 29054175 7 + 31377067 TGTATAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876920 7 + 6579706 TGTACAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I a score=379542.000000 s hg38.chr3_KI270779v1_alt 101338 30 + 205312 GTT-GGGAAAATTCTCCTAAAACC-----CACTGGA s panTro5.chr3 200084986 30 + 202621043 GTT-GGGAAAATTCTCCTAAAACC-----CACTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64580 30 + 190779 GTT-GGGAAAATTCTCCTAAAACC-----CACTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29522 30 + 106623 GTT-GGGAAAATTCTCCTAAAACC-----CACTGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837674 30 + 123690457 GCT-GGGAAAATTCTCCTAAAACC-----CACTGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202437976 30 + 204787373 GTT-GGGAAAATTCTCCTGAAGCC-----CACTGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45780 30 + 192460366 GTT-GGGAAAATTCTCCTGAAGCC-----CACTGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521316 31 + 19675229 GTTGGGGAAAATTCTCCTGAAGCC-----CACTGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457014 30 + 16847902 GTT-GGGAAAATTCTCCTGAAGCC-----CACTGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393421 30 - 91754291 GTT-GGGAAAATTCTCCTGAAGCC-----CACTGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550668 30 - 1977891 GTT-GGGAAAATTCTCCTGAAGCC-----CACTGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429586 30 + 7796314 GTC-GGGAAAATTCTCCTGAAACC-----CACTGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909428 30 - 74750902 GTC-GGGAAAATTCTCCTAAAACC-----CGCAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438335 30 + 17725628 GTT-GGGaaaattctcctaaaacc-----cattgga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400680 30 - 6778120 GCT-GGGAAGATTCCCCTAAAACC-----CACTGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 54936 30 - 69927 GCT-GGGAAAATTCTCCTAAAAGC-----CGCTGGA i aotNan1.NW_018503669v1 C 0 I 201 s otoGar3.GL873829 400571 35 - 608964 ACT-TGGAATACCCTCCTAAAACCAGGATCACTGGG i otoGar3.GL873829 I 4 C 0 s mm10.chr16 65419403 26 - 98207768 TCT-GGAGAAATTCTTTTA----T-----TCCTAGA i mm10.chr16 I 1 C 0 s canFam3.chr33 29054182 35 + 31377067 GTT-GGGAAAATTCCCCTAAGACCCAGATCACAGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3876927 35 + 6579706 GTT-GGGGAAATTCTCCTAAAACCTAAGACATTGGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e micMur3.chr1 25885648 194 - 114275543 I a score=175760.000000 s hg38.chr3_KI270779v1_alt 101368 16 + 205312 TAGAACTTCCAATGGT s panTro5.chr3 200085016 16 + 202621043 CAGAACTTCCAATGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64610 16 + 190779 CAGAACTTCCAATGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29552 16 + 106623 CAGAACTTCCAATGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837704 16 + 123690457 CGGAACTTCCGATGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438006 16 + 204787373 CAGAACTTCCGATGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45810 16 + 192460366 CAGAACTTCCGATGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521347 16 + 19675229 CAGAACTTCCGATGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457044 16 + 16847902 CAGAACTTCCGATGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393451 16 - 91754291 CAGAACTTCCGATGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550698 16 - 1977891 CAGAACTTCCGATGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429616 16 + 7796314 CAGAGCTTCCAATGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909458 16 - 74750902 CAGGACTTCCAAGGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438365 16 + 17725628 caggacttccaatggt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400710 16 - 6778120 CAGGACTTCCAATGGT i cebCap1.NW_016107444v1 C 0 I 12 s otoGar3.GL873829 400606 16 - 608964 CAGAGCTTCCAATGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65419429 8 - 98207768 --------CCATTAGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29054217 16 + 31377067 CAAAGGTCCCAGGGTC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3876962 16 + 6579706 CAGAACATCTACTAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e micMur3.chr1 25885648 194 - 114275543 I e aotNan1.NW_018503669v1 54966 201 - 69927 I a score=124861.000000 s hg38.chr3_KI270779v1_alt 101384 37 + 205312 AAAGTTCCG--------------------------------------------GGGTCAGGGTT-TTGAGGATGGGGATGGT s panTro5.chr3 200085032 37 + 202621043 AAAGTTCCG--------------------------------------------GGGTCAGGGTT-TTGAGGATGGGGATGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64626 37 + 190779 AAAGTTCCG--------------------------------------------GGGTCAGGGTT-TTGAGGATGGGGATGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29568 37 + 106623 AAAGTTCCA--------------------------------------------GGGTCAGGGTT-TTGAGGATGGGGATGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837720 37 + 123690457 GAAATTCCG--------------------------------------------GGGTCAGGGTT-TTGGGGATGGGGATGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438022 38 + 204787373 GAAATCCCG--------------------------------------------GGGCCTGGGCTCTCGGGGATGCGGATGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45826 38 + 192460366 GAAATCCCA--------------------------------------------GGGCCTGGGCTCTCGGGGATGCGGATGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521363 82 + 19675229 GAAATCCCAGGGCCTGGGCTCTCGGGGAAGGGGGTGGTGTGGCTGAAATCCCGGGGCCTGGGCTCTCGGGGATGCGGATGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457060 38 + 16847902 GAAATCCCG--------------------------------------------GGGCCTGGGTACTCGGGGATGTGGATGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393467 82 - 91754291 GAAATTCCGGGGCCAGCACTCTCGGGGATGCGGATGGTGTGGCTGAAATCCCGGGACTGGGGCTCTCGGGGATGCGGATGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550714 38 - 1977891 GAAATCCTGGGGCC--------------------------------------------TGGGCTCTCGGGGATGTGGATGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429632 82 + 7796314 GAAATTCCGGGGCCAGCACTCTTGGGGATGCGGATGCTGTGGCTGAAATTTCAGGACCGGGGCTCTCGGGGATGCGGATGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909474 31 - 74750902 GAAATTCTG--------------------------------------------G-GTCAGGGCGTCTGGGGATGGT------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438381 32 + 17725628 gaaattcgg--------------------------------------------gcatcagggcaTCTGGGGACGGC------ i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400622 29 - 608964 GAAATTTGG--------------------------------------------GGAT---GGTTGTTGGGAATGGT------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65419437 32 - 98207768 AAAATTCTG--------------------------------------------GGGTCAAGGCTCTTGGGGATGCT------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29054234 31 + 31377067 GAAATCCAG--------------------------------------------GGG-CAGAGCTTTTGGGAATGGT------ i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3876978 32 + 6579706 GGAATTCTG--------------------------------------------GGGTCAGGGCTTTTGAGGATGGT------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e micMur3.chr1 25885648 194 - 114275543 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400726 12 - 6778120 I a score=350614.000000 s hg38.chr3_KI270779v1_alt 101421 34 + 205312 GTGGCTTGTTGG-AGGTTAGACTGGGTCAGCTCAG s panTro5.chr3 200085069 34 + 202621043 GTGGCTTGTTGG-AGGTTAGACTGGGTCAGCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64663 34 + 190779 GTGGCTTGTTGG-AGGTTAGACTGGGTCAGCTTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29605 33 + 106623 GT-GCTTGTTGG-AGGTTAGACTGGGTCAGCTCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837757 34 + 123690457 GTGGCTTGTTGG-AGGTTAGACTGCGTCAGCTCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438060 35 + 204787373 GTGGCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45864 35 + 192460366 GTGGCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521445 35 + 19675229 GTGGCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457098 35 + 16847902 GTGGCCTGTTGGAAGGTTAGGCTGGGTCATCTCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393549 35 - 91754291 GTGGCTTGTTGGAAGGTTAGGCTGGGTCAGCTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550752 35 - 1977891 GTGGCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429714 35 + 7796314 GTGGCTTGTTGGAAGGTTAGGCTGGGTCAGCTCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909505 35 - 74750902 GCGGCTTGCTGGAGGGTTAGACCGGGCCAGCTCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438413 35 + 17725628 GTGGCTTGCTGGAGGGTTGGACTCGGCTAGCGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400738 35 - 6778120 GTGGCTTGCTGGAGGGTTAGACTGGGCCAGCCCAG i cebCap1.NW_016107444v1 I 12 C 0 s otoGar3.GL873829 400651 35 - 608964 GTGACTTATTAGAAGGTTAGACTAGGTCAGCACAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65419469 35 - 98207768 ATGAATGATTGGAAGACTAGACTGGGTCAGTTCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29054265 35 + 31377067 GTGAGTCAGTGGGGGATCAGACTAGCGCAGCTCAG i canFam3.chr33 C 0 I 8 s dasNov3.JH569502 3877010 35 + 6579706 GTGAATCACCGGAAGCTTAGGACAGGTCAACTCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e micMur3.chr1 25885648 194 - 114275543 I e aotNan1.NW_018503669v1 54966 201 - 69927 I a score=226900.000000 s hg38.chr3_KI270779v1_alt 101455 24 + 205312 TGCAGATGTCACGGGCCTGGCCTC s panTro5.chr3 200085103 24 + 202621043 TGCAGATGTCACGGGCCTTGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64697 24 + 190779 TGCAGATGTCACGGGCCTTGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29638 24 + 106623 TGCAGATGTCACAGGCCTGGCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837791 24 + 123690457 TGCAGATGTCACGGGCCTGGCCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438095 20 + 204787373 TGCAGATTTCACGGGCCTGG---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45899 24 + 192460366 TGCAGATTTCACGGGCCTGGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521480 24 + 19675229 TGCAGATTTCACAGGCCTGGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457133 24 + 16847902 TGCAGATTTCGCGGGCCTGGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393584 24 - 91754291 TGCAGATTTCATGGGCCTGGCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550787 24 - 1977891 TGCAGATTTCGCGGGCCTGGCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429749 24 + 7796314 TGCAGATTTCACGGGCCTGGCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909540 21 - 74750902 TGCAGATTTCACTGA---GGCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438448 24 + 17725628 TGTGGATTTCATGGGCCTGGCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400773 24 - 6778120 TGCAGATTTCATGGGCCTGGCCTC i cebCap1.NW_016107444v1 C 0 I 155 s otoGar3.GL873829 400686 23 - 608964 CACAGACTTCATGGGCCCACCTT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65419504 23 - 98207768 TATAAATGTCACAGGCCTAGCTC- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877045 24 + 6579706 TGCAGATTTCACTGGCTTGGCCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e micMur3.chr1 25885648 194 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I a score=328297.000000 s hg38.chr3_KI270779v1_alt 101479 56 + 205312 ACTGAGGGGTGGGTTGTTCTCCTAATGTGTGGTACAAAGTAGCAGATGGGGCATGA----- s panTro5.chr3 200085127 56 + 202621043 ACTGAGGGGTGGGTTGTTCTCCTAATGTGTGGTACAAAGTAGCAGATGGGGCATGA----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64721 56 + 190779 ACTGAGGGGTGGGTTGTTCTCCTAATGTGTGGTACAAAGTAGCAGATGGGGCATGA----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29662 56 + 106623 ACTGAGGGGTGGGTTGTTCTCCTAATGTGTGGTACAAAGTAGCAGATGGGGCATGA----- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837815 56 + 123690457 GCTGAGGGGGCGGTGGTTCTCCTACTGTGCAGTACAAAGTAGCAGATGGGGCATGA----- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438115 39 + 204787373 -----------------TCTCCTGCTGTGCGGTACACAGTAGCAGATGGGGCATGA----- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45923 56 + 192460366 GCTGAGGGGCGGGTGGTTCTCCTGCTGTGCGGTACACAGTAGCAGATGGGGCATGA----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521504 56 + 19675229 GCTGAGGGGCGGGTGGTTCTCCTGCTGTGCGGTACACAGTAGCAGATGGGGCATGA----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457157 56 + 16847902 GCTGAGGGGCGGGTGGTTCTCCTGCTGTGCAGTGCAAAGTAGCAGATGGGGCATGA----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393608 56 - 91754291 GCTGAGGGGAGGATGGTTCTCCTGCTGTGCGGTGCAAAGTAGCAGGTGGGGCATGA----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550811 56 - 1977891 GCTGAGGGGCGGGTGGTTCTCCTGCTGTGCGGTATACAGTAGCAGATGGGGCATGA----- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429773 56 + 7796314 ACTGAGGGCCGGGTGGTTCTCCTACTGTGCGGTACAAAGTAGCAGATGGGGCATGA----- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909561 55 - 74750902 TCTGAGGCATGGATGGTTCTCCCACTGTGCGGTACAAAGCAGCAGAGGGAGCATG------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438472 53 + 17725628 TC--AGGCGTGGATGGTTCTCCCACCGTGCGGGACAAAGTGGCCGATGGAGCCTG------ i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400709 47 - 608964 TCTGAGGTATAGGTCCCCCCCTC---------TACAAAGTAGGAGATGGAACAAGA----- i otoGar3.GL873829 C 0 I 5 s mm10.chr16 65419527 16 - 98207768 ---------AGTGCTGGTCTCGTGA------------------------------------ i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877069 39 + 6579706 -----------------TCCCCAGCTC-----TATAAAGTATGAGATGGAGCACAATGTGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7404850 242 + 22200726 I e micMur3.chr1 25885648 194 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I a score=628459.000000 s hg38.chr3_KI270779v1_alt 101535 67 + 205312 TGGGAAGTGTCTAAGCTCTGCTCACAGA-TGTAACC-GTGAAAACAGGCCCAGTGCACAGTCTAATGTG s panTro5.chr3 200085183 67 + 202621043 TGGGAAGTGTCTAAGCTCTGCTCACAGA-TGTAACC-GTGAAAACAGGCCCAGTGCATAGTCTAATGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64777 67 + 190779 TGGGAAGTGTCTAAGCTCTGCTCACAGA-TGTAACC-GTGAAAACAGGCCCAGTGCATAGTCTAATGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29718 67 + 106623 TGGGAAGTGTCTAAGCTCTGCTCACAGA-TGTAACC-GTGAAAACAGGCCCAGTGCACAGTCTAATGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837871 67 + 123690457 TGGGAAGTGTCTAAGCTCTGCTCACAGA-TGTGACC-GTGAAAACAGGCCCAGTGCAGAGTCTAATGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438154 68 + 204787373 CGGGAAGTATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCCAGTACACAGTCTAACGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 45979 68 + 192460366 CGGGAAGTATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521560 68 + 19675229 CGGGAAGTATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCTGGTACACAGTCTAACGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457213 68 + 16847902 CGGGAAGGATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393664 68 - 91754291 CGGGAAGTATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550867 68 - 1977891 CGGGAAGTATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429829 68 + 7796314 CGGGAAGTATCTAAGCTCTGCTCACAAA-CGTGACCAGTGAAAACAGGCCCGGCACACAGTCTAACGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909616 54 - 74750902 -------------AGCTCTGCTCACAGA-TGTGACCACGGAAAACAGGCCCAGTATAGAGCCTAAC-GT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438525 50 + 17725628 -------------AGCTCTG----CAGG-TGTGACCAGGGAAAGCA-GCCCAGGACACAGCGTGACGGG i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25885842 67 - 114275543 TGGGAAGTGTCTAAGCTCTGCTCACAGG-T-TTaccagtgaaaatgggcccagtgcacagtctaatgtg i micMur3.chr1 I 194 I 15 s proCoq1.NW_012133858v1 7405092 67 + 22200726 TGGGAAGTATCTAAGCTCTGCTCACAGG-T-tgaccagtgaaaatgggtccagtgcacagtctaatgtg i proCoq1.NW_012133858v1 I 242 C 0 s otoGar3.GL873829 400761 67 - 608964 TGGGAAGTATCTAAGTTCCACTCACAGA-C-TGACCAGCAAAAATGGGCCCAGTGCACAGTCTACCATG i otoGar3.GL873829 I 5 C 0 s mm10.chr16 65419543 47 - 98207768 -------------ACCTGTACT--------GTGAACAGTGAGGCTAGACCTGGTGCACCACCTAAGAT- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877108 65 + 6579706 TGGGCTGTGTCTAGGCTCCACTCACAGAGTGTGACTAGTGAAAA----CTCTGTGCACAGCCCAATGTG i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I a score=105356.000000 s hg38.chr3_KI270779v1_alt 101602 11 + 205312 GATTGCCTCTT s panTro5.chr3 200085250 11 + 202621043 GATTGCCTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64844 11 + 190779 GATTGCCTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29785 11 + 106623 GATTGCCTCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837938 11 + 123690457 GGTTGCCTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438222 11 + 204787373 GATTGCCTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46047 11 + 192460366 GATTGCCTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521628 11 + 19675229 GATTGCCTCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457281 11 + 16847902 GATTGCCTCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393732 11 - 91754291 GATTGCCTCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550935 11 - 1977891 GATTGCCTCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429897 11 + 7796314 GATTGCCTCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909670 11 - 74750902 GGTGGCCTCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438575 11 + 17725628 GGTCGCCTGTT i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7405159 11 + 22200726 aactgaccctt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 400828 11 - 608964 AATTGCCCCTT i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65419590 10 - 98207768 AATGgcttct- i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3877173 11 + 6579706 ACTTGTCCTTT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25885909 15 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I a score=-20200.000000 s hg38.chr3_KI270779v1_alt 101613 3 + 205312 T--------------------------------------------------------GA s panTro5.chr3 200085261 3 + 202621043 T--------------------------------------------------------GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64855 59 + 190779 TGACAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29796 3 + 106623 T--------------------------------------------------------GA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837949 3 + 123690457 T--------------------------------------------------------GA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438233 3 + 204787373 T--------------------------------------------------------GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46058 3 + 192460366 T--------------------------------------------------------GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521639 3 + 19675229 T--------------------------------------------------------GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457292 3 + 16847902 T--------------------------------------------------------GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393743 3 - 91754291 T--------------------------------------------------------GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550946 3 - 1977891 T--------------------------------------------------------GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429908 3 + 7796314 T--------------------------------------------------------GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909681 3 - 74750902 T--------------------------------------------------------GA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438586 3 + 17725628 C--------------------------------------------------------GA i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7405170 3 + 22200726 c--------------------------------------------------------gc i proCoq1.NW_012133858v1 C 0 I 1 s mm10.chr16 65419601 2 - 98207768 c--------------------------------------------------------a- i mm10.chr16 I 1 C 0 s dasNov3.JH569502 3877184 3 + 6579706 T--------------------------------------------------------GG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25885909 15 - 114275543 I e otoGar3.GL873829 400839 3 - 608964 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I a score=79227.000000 s hg38.chr3_KI270779v1_alt 101616 53 + 205312 --CAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATG s panTro5.chr3 200085264 53 + 202621043 --CAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64914 53 + 190779 --CAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29799 25 + 106623 --CAGTGCCCTTGCTAATACCTGAAGC---------------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837952 25 + 123690457 --CAGCGCCCTTGCTGATACCTGAAGC---------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438236 25 + 204787373 --CAGTGCCCTTGTCAGTACCCGAAGC---------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46061 25 + 192460366 --CAGTGCCCTTGTCAGTACCCGAAGC---------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521642 25 + 19675229 --CAGTGCCCTTGTCAGTACCCGAAGC---------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457295 25 + 16847902 --CAGTGCCCTTGTCAGTACCCGAAGC---------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393746 25 - 91754291 --CAGTGCCCTTGTCAGTACCCGAAGC---------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550949 25 - 1977891 --CAGTGCCCTTGTCAGTACCCGAAGC---------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429911 25 + 7796314 --CAATGCCCTTGTCAATACCCGAAGC---------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909684 3 - 74750902 --CGG-------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438589 2 + 17725628 --T-G-------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 400842 50 - 608964 --CAGTGCCCCTGCCAACACCTCAAGCTTGCATCTGGCACCTTTCACAGTCA--- i otoGar3.GL873829 I 3 T 53 s mm10.chr16 65419603 25 - 98207768 --ccctactctggcaaatgtctcagac---------------------------- i mm10.chr16 C 0 I 2 s dasNov3.JH569502 3877187 48 + 6579706 TAGCGTGTACCTGTGAACCTCTCAAGCTTGCATCTAGCACCTCTCACA------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405173 1 + 22200726 I e micMur3.chr1 25885909 15 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I a score=1587.000000 s hg38.chr3_KI270779v1_alt 101669 4 + 205312 GGAC s panTro5.chr3 200085317 4 + 202621043 GGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64967 4 + 190779 GGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s otoGar3.GL873829 400839 4 - 608964 GAGC i otoGar3.GL873829 T 53 C 0 e proCoq1.NW_012133858v1 7405173 1 + 22200726 I e micMur3.chr1 25885909 15 - 114275543 I e mm10.chr16 65419628 2 - 98207768 I e dasNov3.JH569502 3877235 0 + 6579706 C e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I e macNem1.NW_012014355v1 521667 0 + 19675229 C e calJac3.chr17 909687 0 - 74750902 C e saiBol1.JH378146 438591 0 + 17725628 C e colAng1.NW_012118932v1 429936 0 + 7796314 C e manLeu1.NW_012102020v1 550974 0 - 1977891 C e chlSab2.chr15 393771 0 - 91754291 C e cerAty1.NW_012004056v1 457320 0 + 16847902 C e macFas5.chr2 46086 0 + 192460366 C e rheMac8.chr2 202438261 0 + 204787373 C e nomLeu3.chr11 120837977 0 + 123690457 C e gorGor5.CYUI01000576v1 29824 0 + 106623 C a score=2865.000000 s hg38.chr3_KI270779v1_alt 101673 2 + 205312 AG s panTro5.chr3 200085321 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64971 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s micMur3.chr1 25885924 2 - 114275543 AG i micMur3.chr1 I 15 C 0 s proCoq1.NW_012133858v1 7405174 2 + 22200726 AG i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 400843 2 - 608964 AG i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65419628 2 - 98207768 I e dasNov3.JH569502 3877235 0 + 6579706 C e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 54966 201 - 69927 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I e macNem1.NW_012014355v1 521667 0 + 19675229 C e calJac3.chr17 909687 0 - 74750902 C e saiBol1.JH378146 438591 0 + 17725628 C e colAng1.NW_012118932v1 429936 0 + 7796314 C e manLeu1.NW_012102020v1 550974 0 - 1977891 C e chlSab2.chr15 393771 0 - 91754291 C e cerAty1.NW_012004056v1 457320 0 + 16847902 C e macFas5.chr2 46086 0 + 192460366 C e rheMac8.chr2 202438261 0 + 204787373 C e nomLeu3.chr11 120837977 0 + 123690457 C e gorGor5.CYUI01000576v1 29824 0 + 106623 C a score=67389.000000 s hg38.chr3_KI270779v1_alt 101675 30 + 205312 TGCCCTTGCTAATACCTGAAGCTTGCATTC s panTro5.chr3 200085323 30 + 202621043 TGCCCTTGCTAATACCTGAAGCTTGCATTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 64973 30 + 190779 TGCCCTTGCTAATACCTGAAGCTTGCATTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29824 8 + 106623 ----------------------TTGCATTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837977 8 + 123690457 ----------------------TTGCATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438261 8 + 204787373 ----------------------TTGCATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46086 8 + 192460366 ----------------------TTGCATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521667 8 + 19675229 ----------------------TTGCATTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457320 8 + 16847902 ----------------------TTGCATTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393771 8 - 91754291 ----------------------TTGCATTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550974 8 - 1977891 ----------------------TTGCATTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429936 8 + 7796314 ----------------------TTGCATTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909687 29 - 74750902 TGCCCTTG-CAGTACCCAGAGCTTGCGTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438591 30 + 17725628 CGCACTTGCCAATACCTGGAGCTTGCGTTT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 55167 30 - 69927 TGCCCTTGCCGGTACCCGGAGCTTGCATTT i aotNan1.NW_018503669v1 I 201 C 0 s micMur3.chr1 25885926 30 - 114275543 TGCCCCTGCCAACACTTCAAGCTTGCATTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7405176 30 + 22200726 TGCCCCTGCCAATGCTTCAAGCTTGCATTT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 400845 30 - 608964 TGCCCCTGCCAACACCTCAAGCTTGCATCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65419630 5 - 98207768 -------------------------cagcc i mm10.chr16 I 2 C 0 s dasNov3.JH569502 3877235 7 + 6579706 --------------------TCTTGCC--- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I e cebCap1.NW_016107444v1 400797 155 - 6778120 I a score=2814602.000000 s hg38.chr3_KI270779v1_alt 101705 214 + 205312 AGCACCTCTCACAGTCAATGGGTGCCACACTGCTGAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTTATGCCA-GGTGTAGAGTTC-ATAGCCAGGCTGGACAGGT-GGAATGATTGCCCTTAGCAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGCGAAAGA s panTro5.chr3 200085353 214 + 202621043 AGCACCTCTCACAGTCAATGGGTGCCACACTGCTGAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGACTTATGCCA-GGTGTAGAGTTC-ATAGCCAGGCTGGACAGGT-GGACTGATTGCCCTTAGCAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGCGAAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65003 214 + 190779 AGCACCTCTCACAGTCAATGGGTGCCACACTGCTGAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGACTTATGCCA-GGTGTAGAGTTC-ATAGCCAGGCTGGACAGGT-GGACTGATTGCCCTTAGCAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGCGAAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 29832 214 + 106623 AGCACCTCTCACAGTCAATGGGTGCCACACTGCTGAAAAGTGGCTCAGGCCTCCTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTTTTATGCCA-GGTGTAGAGTTC-ATAGCCAGGCTGGACAGGT-GGAATGATTGCCCTTAGCAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGTGAAAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120837985 214 + 123690457 AGCACCTCTCAGAGTCAATGGGTGCCGCACCGCTTAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTTATGCCA-GGTGTAGGGTTC-ACAGCCAGGCTAGACAGGT-GGAGTGATTGCCCTTAGCAGACGGAAGCAAGATATGTCCGTGGAGAGTGGGCTCCTTTGTTGCAGGCGAAAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438269 214 + 204787373 AGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAAAGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTCATGCCA-GGTGTAGAGTTC-ATAGCTGGGCTGGACAGGT-GAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACATCTGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46094 214 + 192460366 AGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAAAGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTCATGCCA-GGTGTAGAGTTC-ATAGCCGGGCTGGACAGGT-GAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACGTCTGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521675 214 + 19675229 AGCACCTCTCACAGTCAATGGGTGCCGTACCACTTAAAAGTGGCTGAGGCTTATTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTTATGCCA-GGTGTAGAGTTC-ATAGCCGGGCTGGACAGGT-GAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACGTCTGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457328 214 + 16847902 AGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAACGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGG-CAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTTATGCCA-GGTGTAGAGTTC-ATAGCCGGGCTGGACAGGT-GAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACGTCTGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393779 214 - 91754291 AGCACCTCTCACAGTCAATAGGTACCGTACCACTTAAAAGTGGCTCAGACTTATTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTTATGCCA-GGTGTAGAGTTC-ATAGCCGGGCTGGACAGGT-GAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACGTCCGTGGAGAGTGGGATCCTTCGTTGCAGGTGAAAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 550982 214 - 1977891 AGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAACGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATGCT--------------GGCTGGGGGTCTTACGCCA-GGTGTAGAGTTC-ATAGCCGGGCTGGACAGGT-GAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACGTCCGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 429944 215 + 7796314 AGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAAAGTGGCTCAGACTTACTGTCATCCCTTGCAAGGG-TAAACCTGGCAGAGATCCT--------------GGCTGGGGGTCTTATGCCA-GGTGTAGAGTTC-ATAGCCGGGCTGGACAGGTGGAAGTGATTGCCCTTTGCAGAGGGAAGCAAGATACGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGCAAAAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909716 213 - 74750902 AGCACCTCTCACAGTCCATGGGTGCTACAGTGCTTATCAGTGGCTCAGGCTTACTGTCATCCCTTGCAAGGG-TAATCCTGGCAGAGATATT------------GTGG--GGGGGTCTTATGCCA-GGTGCAGAATTC-ATAGCCAGGCTGGACA-GT-GAAATGATTGCCCTTAGCAGACAGAAGCAAGATATGTCCGTTGAGAGTGGGACCCATTGTTGCAGGCAAAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438621 221 + 17725628 AGCACCTCT--CAGTCCATGGGTGCCACACTGCTTATCAGTGGCTCAGCCTTACTGCCATCCTTTGCA--GG-AAACCCTAGCAGAGATGCTGGGGCAGTGGCGGGGG--GGGGGTCTTATGCCA-GGTGCAGAGTTC-ATAGCCAGGCTGGACA-GT-GAAACGATCGCCCTTAGCAGGCAGAAGCAAGGTATGTCCATTCAGAGTGGGACCCTTTGCTGCAGGCAAAAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 400952 191 - 6778120 AGCACCTCTCACAGTCCGTGGCTGCCACACGGCTTATCAGTGGCTCAGGCTTACTGTCATCCCTTGCAAGGG-TAACCCTGGCAGAGATGCT--------------GG--GGAGGTCT----------------------TAGCCAGGCTGGACA-GT-GAAATGATTGCCCTTAGCAGACAGAAGCAAGATCTGTCCATGGAGAGTGGGACCCTTTGCTGCAGGCAAAAGA i cebCap1.NW_016107444v1 I 155 C 0 s aotNan1.NW_018503669v1 55197 210 - 69927 AGCACCTCTCACAGTCCATGGGTGCCACACTACTTATCAGTGGCTCAGGCTTACTGTCATCCCTTGCAAGGG-TAACCCTGGCACAGATGCT--------------GG--GGGAGTCTTATGCCA-GGTGCAGAGCTC-ATAGCCAGGCTGGACA-GT-GAAATGATTGCTCTTAGCAGACAGAAGCAAGATACGTCCATTGAGAGTGGGACCCTTTGTGGTAGGCAAA-GA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25885956 214 - 114275543 GGCGCCTCTCATAGTCAGTGGGTGCCACACAGCTTATCAGTGGCTCAGGCTTGGTGTCACCCCTTGTAAGGA-TAAACCTGGCAGAGGTGCT--------------GGCTGGGGGTCTTATGCCA-GGGGTAGAGTCC-ACAACCAGGCTGGACAGAT-GAGATGACTACCCTTAGCAGATGGAAGCAGGACATATCCATTGCAAGTGGGATCCTTTGTTGTAGGCAAAAGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7405206 215 + 22200726 GGCACCTCTCACAGTCAGTGGGTGCCATGCAGCTTATCAGTGGCTCAGGCTTGGTGTCACCCCTTGTAAGGA-TAAACCTGGCAGAGGTGCT--------------ACCTGGGAGTCTTATGCCAGGGGGTAAAGTCC-ACAGCCAGGCTGGACAGAT-GAGATGACTACCCTTAGCAGATGGAACCAGGATATATCCATTGCAAGTGGGATCCTTTGTTGCAGGCAAAAGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 400875 213 - 608964 GGCACCTTTCACAGTCAATGGGTACCACACAGCTTACCTGTGGCTCAGGCCGGGTGTCACTGCTTGTAAGGA-TAAGCCTAGCAGAGGTGCT--------------GGCTGGGGGTCGAGGGCCA-AGGGTA-AGTCC-ACAACCAAGCTGGACAGAT-GAGATGCCTACCCTTAGCAGATGGAAGCAGGATGTAGCCATTGCAAGTGGGATCCTTTGTGGCAGGCAAAAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65419635 203 - 98207768 agcaccttccatagtcagtgagagtcacat----------tagttcatgctccatgccACCTAGTAAAGGAA-TAGACCCTGACGAGGGGCA--------------GACCAGCAG-CTTCTGTTA-GGGGTACAGTCCTGCTGCCAGAATAGACAGGT-GAGGTGGTTGCCCTTA-CAGAGCGGAAGTTGCTGTTATCCCTGCCAGAAGGATCCCTCGGTGAATGCAAAAGA i mm10.chr16 C 0 I 440 s dasNov3.JH569502 3877242 176 + 6579706 --------------------------------------AGGGGCTCTGGATTGGTGTCATCTCTTGCAAGGATTAAACCTGTCAGAGATGCT--------------GGTTGGG-GTCTTATGCCA-GGGGTAGAGTCCTGGAGCCTGGCTGGAGAGGT-GAGGTGGTTACCCTTAGCAAATGGAGGCAGGGTGTATCCATTGCAAGTAGGA-ACTTTGTTGCAGACAAAACA i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I a score=953864.000000 s hg38.chr3_KI270779v1_alt 101919 76 + 205312 AAACCTCTGTCTGTCGTAAGTAAAAGGGGGATTTGTTGGCA-------------------------GCGTCCCAGAGTGCATAGAATCAAAGCAATGCCAG s panTro5.chr3 200085567 76 + 202621043 AAACCTCTGTCTGTCGTAAGTAAAAGGGCGATTTGTTGGCA-------------------------GTGTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65217 76 + 190779 AAACCTCTGTCTGTCGTAAGTAAAAGGGCAATTTGTTGGCA-------------------------GTGTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30046 75 + 106623 AAACCTCTGTCTGTCGTAAGTAAAAGGG-GATTTGTTGGCA-------------------------GCGTCCCAGACTGCATAGAATCAAAGCAATGCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838199 76 + 123690457 AAACCTCTGTCTGTCATAAGTAAAAGGGGGATTTGCTGGCA-------------------------GCGTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438483 75 + 204787373 AAACCTCTGTCTGTCATAAGTAAAAGGGGGATTTGTTGGCA-------------------------G-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46308 75 + 192460366 AAACCTCTGTCTGTCATAAGTAAAAGGGGGATTTGTTGGCA-------------------------G-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521889 73 + 19675229 AAAC--CTGTCTGTCATAAGTAAAAGGGGGATTTGTTGGCA-------------------------G-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457542 75 + 16847902 AAACCTCTGTCTGTCGTAAGTAAAAGGGGGACTTGTTGGCA-------------------------G-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 393993 75 - 91754291 AAACCTCTGTCTGTCATAAGTAAAAGGGGGATTTGTTGGCA-------------------------G-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551196 75 - 1977891 AAACCTCTGTCTGTCGTAAGTAAAAGGGGGATTTGTTGGCA-------------------------G-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430159 100 + 7796314 AAACCTCTGTCTGTCGTAAGTAAAAGGGGGATTTGTTGGCAGGGTCCCAGGGGGATTTGTTGGCAGG-GTCCCAGAGTGCATAGAATCAAAGCAATGCCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 909929 74 - 74750902 AGACCTCTGTCTGTCATGAGTAAAAGGGGGATTTGTTGGCA-------------------------GGGTCT--GAGTGCATAGAATCAAAGGAATGCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438842 74 + 17725628 AAACCTCTGTCTGTCATGAGTAAAAGGGGGATTTGCTGGCA-------------------------GGGTCT--GAGTGCCCAGAATCAAAGGAATGTCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 401143 73 - 6778120 AAACCCCTGTCTGTCATGAGTAAAA-GGGGATTTGTTGGCA-------------------------GGGTCT--GAGTGTGCAGAATCAGAGGAATGCCAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 55407 74 - 69927 AAACCTCTGTCTGTCGTGAGTAAAAGGGGGATTTGTTGGCA-------------------------GGGTCT--GAGTGACTAGAATCAAAGGGATGCCAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25886170 76 - 114275543 AAACCGCTGACTGTCTTAAGTAAAGGGGGCATTCATTGGCA-------------------------GGGTCCCATGGTACACAGAATCAAAGGAATTCCAG i micMur3.chr1 C 0 I 81 s proCoq1.NW_012133858v1 7405421 75 + 22200726 AAACCACTGACTGTCAT-AGTAAAGGGGGCAGTCATTGGCA-------------------------GGGTCCCACGGTACATAGAATCAAAGGAATACCAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 401088 76 - 608964 AAATCACTTGCTGTCATAAGTAAAAGGGGCATACATTGGCA-------------------------GGGTCCCATGGTACCCAGAATCGAAGGAATTCCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65420278 66 - 98207768 AAAGCTCTTTGCTTTGCAAACAAGGGGAGAG---------A-------------------------GAACCCCAGA-TGCACAGAAGCAAAGGAATGGCAG i mm10.chr16 I 440 C 0 s dasNov3.JH569502 3877418 72 + 6579706 -AGC--CTGGCTATAACAAGTGAAAGAGGGGTTTGTTGCAA-------------------------G-GTGCAAGGGTGCATAGAATCAAAGGATTACTAG i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I a score=334809.000000 s hg38.chr3_KI270779v1_alt 101995 29 + 205312 GACAGCAGGCTTGGAAAATAGGCAGGAGG----------- s panTro5.chr3 200085643 29 + 202621043 GACAGCAGGCTTGGAAAATAGGCAGGAGG----------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65293 29 + 190779 GACAGCAGGCTTGGAAAATAGGCAGGAGG----------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30121 29 + 106623 GACAGCAGGCTTGGAAAATAGGCAGGAGG----------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838275 29 + 123690457 GAGAGCAGGCTTGGAAAATAGGCAGGAGG----------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438558 29 + 204787373 GACAGCAGGCTCGGAACATAGGCAGGAGG----------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46383 29 + 192460366 GACAGCAGGCTCGGAACATAGGCAGGAGG----------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521962 29 + 19675229 GACAGCAGGCTCGGAACATAGGCAGGAGG----------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457617 29 + 16847902 GACAGCAGGCTCGGAACATAGGCAGGAGG----------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394068 29 - 91754291 GACAGCAGGCTCGGAACATAGGCAGGAGG----------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551271 29 - 1977891 GACAGCAGGCTCGGAACATAGGCAGGAGG----------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430259 27 + 7796314 G--AGCAGGCTCGGAAAATAGGCAGGAGG----------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910003 29 - 74750902 GACAGCAGGCTTGGGACATAGGCAGGAGA----------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438916 28 + 17725628 GACAGCAGGCTTGGGGAA-AGGCAGCAGG----------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 401216 27 - 6778120 GGCAGCAGGCTTGGGAC--AGGCAGGAGG----------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 55481 29 - 69927 GACGGCAGGCTTGGGAAAGAGGCAGGAGG----------- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7405496 29 + 22200726 AGGAGTGGGCTTGAAAAACAAGCAGGAGG----------- i proCoq1.NW_012133858v1 C 0 I 52 s otoGar3.GL873829 401164 29 - 608964 AAGAGCAGCCTTGAAAAACAAGCAGGAGG----------- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65420344 25 - 98207768 AAGAGCAGCTTTG----ACAAGCATAAAG----------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877490 40 + 6579706 AGGAGCAGGCTTGAAAAACAGGTGGGAGGAAGGGCTGAAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25886246 81 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I a score=537413.000000 s hg38.chr3_KI270779v1_alt 102024 63 + 205312 GCCCCCA----------GGAGC-TCTGAG----------------------------------------------GTCCAGACAGTGGGATCAGGCTGGCTGGGACACTGTC--CCTCTTGC s panTro5.chr3 200085672 63 + 202621043 GCCCCCA----------GGAGC-TCTGGG----------------------------------------------GGCCAGACGGTGGGATCAGGCTGGCTGGGACACTGTC--CCTCTTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65322 63 + 190779 GCCCCCA----------GGAGC-TCTGGG----------------------------------------------GGCCAGACGGTGGGATCAGGCTGGCTGGGACACTGTC--CCTCTTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30150 62 + 106623 G-CCCCA----------GGAGC-TCTGGG----------------------------------------------GGCCAGAGAGTGGGATCAGGCTGGCTGGGACACTGTC--CCTCTTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838304 63 + 123690457 GCCCCCA----------GGGGC-TCTGGG----------------------------------------------GGCCAGACAATGGGATCACGCTGGCTGGGACACTGTC--CCTCTTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438587 73 + 204787373 ACCCCCAGGGGAGTGCGGGGGC-TCTGGG----------------------------------------------GGCCAGACAGTGGGACCACGCTGGCTGGGACACGGTC--CCTCTTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46412 73 + 192460366 ACCCCCAGGGGAGTGCGGGGGC-TCTGGG----------------------------------------------GGCCAGACAGTGGGACCACGCTGGCTGGGACACGGTC--CCTCTTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 521991 72 + 19675229 ACCCCCAGGGGAGTGCGGGGGC-TCTGGG----------------------------------------------GGCCAGACAGTGGGA-CACACTGGCTGGGACACGGTC--CCTCTTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457646 73 + 16847902 ACCTCCAGGGGAGTGCGGGGGC-TCTGGG----------------------------------------------GGCCAGACAGTGGGACCACGCTGGCTGGGACACGGTC--CCTCTTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394097 72 - 91754291 ACCCCCAGGGGAGTGCGGGGGC-TCT-GG----------------------------------------------GGCCAGACAGTGGGGTCACGCTGGCTGGGACACGGTC--CCTCTTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551300 73 - 1977891 ACCCCCAGGGGAGTGCGGGGGC-TCTGGG----------------------------------------------GGCCAGACAGTGGGACCACGCTGGCTGGGACACGGTC--CCTCTTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430286 73 + 7796314 ACTCCCAGGGGAGTGCAGGGGC-TCTGGG----------------------------------------------GGCCAGACAGTGGGGTCACGCTGGCTGGGACACTGTC--CCTCCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910032 62 - 74750902 ACCCCCA----------GGGGC-TCTGG-----------------------------------------------GGCCAGACAGCGGGAACACGCTGGCTGGGACACGGTC--ACTCTTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 438944 108 + 17725628 A-CCCCA----------GGGGC-TCTGGGGGCCAGACGGTGGGAACATACGGGCTGGGACATGGTCGCTCTTGCCGGTCAGATGGCGGGAACACCCTGGCTGGGACAGGGTC--GCTCTTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 401243 61 - 6778120 A-CCCCA----------GGGGC-TCTGG-----------------------------------------------GGTCAGACGGTGGGAGCACGCTGGCTGGGACACGGTC--GCTCTTGC i cebCap1.NW_016107444v1 C 0 I 1290 s aotNan1.NW_018503669v1 55510 63 - 69927 ACCCCCA----------GGGGC-TCTGGG----------------------------------------------GGCCAGATGGTGGGAACAGACTGGCTGGGACACGGTC--GCTCTTGC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401194 48 - 608964 ACCCAC-----------GGGGC-TCTGGG----------------------------------------------GATTGGATAGTGGGAACATTCTGGTTGGGAC---------------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65420369 29 - 98207768 ------------------------------------------------------------------------------------------ACATGCTTCCTAGGACACTGTC---CTCTTGC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877530 66 + 6579706 GAACCCA----------GGGGCACCTGGA----------------------------------------------GACTAGGCAGTGGAAACATTCTGGCTAGAACCCAATCAGCTGCTAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405525 52 + 22200726 I e micMur3.chr1 25886246 81 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I a score=18783.000000 s hg38.chr3_KI270779v1_alt 102087 2 + 205312 TG s panTro5.chr3 200085735 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65385 2 + 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30212 2 + 106623 TG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838367 2 + 123690457 TG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438660 2 + 204787373 TG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46485 2 + 192460366 TG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522063 2 + 19675229 TG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457719 2 + 16847902 TG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394169 2 - 91754291 TG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551373 2 - 1977891 TG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430359 2 + 7796314 TG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910094 2 - 74750902 TG i calJac3.chr17 C 0 I 800 s saiBol1.JH378146 439052 2 + 17725628 TG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 55573 2 - 69927 CA i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65420398 2 - 98207768 CG i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3877596 2 + 6579706 CG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405525 52 + 22200726 I e micMur3.chr1 25886246 81 - 114275543 I e otoGar3.GL873829 401242 0 - 608964 C e canFam3.chr33 29054300 8 + 31377067 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I a score=11173.000000 s hg38.chr3_KI270779v1_alt 102089 4 + 205312 GTCA s panTro5.chr3 200085737 4 + 202621043 GTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65387 4 + 190779 GTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30214 4 + 106623 GTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838369 4 + 123690457 GTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438662 4 + 204787373 GTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46487 4 + 192460366 GTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522065 4 + 19675229 GTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457721 4 + 16847902 GTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394171 4 - 91754291 GTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551375 4 - 1977891 GTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430361 4 + 7796314 GTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910896 4 - 74750902 GTCA i calJac3.chr17 I 800 C 0 s saiBol1.JH378146 439054 4 + 17725628 GTCG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 55575 4 - 69927 GTCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401242 2 - 608964 CT-- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3877598 2 + 6579706 CT-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405525 52 + 22200726 I e micMur3.chr1 25886246 81 - 114275543 I e mm10.chr16 65420400 1 - 98207768 I e canFam3.chr33 29054300 8 + 31377067 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I a score=17100.000000 s hg38.chr3_KI270779v1_alt 102093 1 + 205312 G s panTro5.chr3 200085741 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65391 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30218 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838373 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438666 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46491 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522069 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457725 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394175 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551379 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430365 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910900 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439058 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 55579 1 - 69927 G i aotNan1.NW_018503669v1 C 0 I 490 s micMur3.chr1 25886327 1 - 114275543 G i micMur3.chr1 I 81 C 0 s proCoq1.NW_012133858v1 7405577 1 + 22200726 G i proCoq1.NW_012133858v1 I 52 C 0 s otoGar3.GL873829 401244 1 - 608964 G i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3877600 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65420400 1 - 98207768 I e canFam3.chr33 29054300 8 + 31377067 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I a score=310135.000000 s hg38.chr3_KI270779v1_alt 102094 26 + 205312 TCACTATTGGATGCTGCCACAGCCAA s panTro5.chr3 200085742 26 + 202621043 TCACTATTGGATGCTGCCACAGCCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65392 26 + 190779 TCACTATTGGATGCTGCCACAGCCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30219 26 + 106623 TCACTATTGGATGCTGCCACAGCCAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838374 26 + 123690457 TCACTATTGGATGCCGTCACAGCCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438667 26 + 204787373 TCACTACTGGACGCTGCCACAGCCGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46492 26 + 192460366 TCACTACTGGACGCTGCCACAGCCGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522070 26 + 19675229 TCACTACTGGACGCTGCCACAGCCGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457726 26 + 16847902 TCACTACTGGACGCTGCCACAGCCGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394176 26 - 91754291 TCACTACTGGACGCTGCCACAGCCGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551380 26 - 1977891 TCACTACTGGACGCTGCCACAGCCGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430366 26 + 7796314 TCACTATTGGATGCTGCCACAGCCGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910901 26 - 74750902 TCACTATTGGATGCTGCCACAGCTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439059 26 + 17725628 TCACTATTGGATGCTGCCACAGCTGA i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25886328 26 - 114275543 TCACTATTGGATGCTGCCACAGCCAA i micMur3.chr1 C 0 I 475 s proCoq1.NW_012133858v1 7405578 26 + 22200726 TCACTATTGGATGCTGCCACAGCCAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 401245 26 - 608964 TCAATATTGGATGCTGCCACAGCCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65420401 10 - 98207768 GCACTGTCCG---------------- i mm10.chr16 I 1 C 0 s dasNov3.JH569502 3877601 26 + 6579706 TTGCTACTGGATGCGGCCATGGCCAC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I a score=235940.000000 s hg38.chr3_KI270779v1_alt 102120 25 + 205312 GGGGCATCACGTGGCCTGCACACAC s panTro5.chr3 200085768 25 + 202621043 GGGGCATCACGCGGCCTGCACACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65418 25 + 190779 GGGGCATCACGCAGCCTGCACACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30245 25 + 106623 GGGGCATCACGTGGCCTGCACACAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838400 25 + 123690457 CGGGCATCACGCAGCCTGCGCACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438693 25 + 204787373 CGGGCGTCATGCGGCCTGCGCACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46518 25 + 192460366 CGGGCGTCATGCGGCCTGCGCACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522096 25 + 19675229 CGGGCGTCATGCGGCCTGCGCACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457752 25 + 16847902 CGGGCGTCCTGCGGCCTGTGCACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394202 25 - 91754291 CGGCCGTCATGCGGCCTGCGCACAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551406 25 - 1977891 CGGGCGTCATGCGGCCTGCGCACAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 430392 25 + 7796314 CGGGCGGTGTGCGGCCTGCGCACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910927 25 - 74750902 CGGGCATCATGCTGCCCATGCACAC i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 439085 25 + 17725628 TGGGCCTCATGCTGCCTACGCACAC i saiBol1.JH378146 C 0 I 1 s proCoq1.NW_012133858v1 7405604 25 + 22200726 TGTGCATCATGCTGCCTGAACACAC i proCoq1.NW_012133858v1 C 0 I 482 s otoGar3.GL873829 401271 25 - 608964 TGTGCATCATGCTGCCTGAACACAC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65420411 25 - 98207768 TGGATGTCGTGCTTCCTCCATGTGC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877627 25 + 6579706 TGGGCATTGTGCTGCCTGTACACAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25886354 475 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I a score=540784.000000 s hg38.chr3_KI270779v1_alt 102145 69 + 205312 --ATTCACA--TAGGTTCTCGctgcctttttgtctcactggactttttgctccagagccaaagtcctgagtag- s panTro5.chr3 200085793 69 + 202621043 --ATTCACA--TAGGTTCTCGctgcctttttgtctcactggactttttgctccagagccaaagtcctgagtag- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65443 69 + 190779 --ATTCACA--TAGGTTCTCGctgcctttttgtctcactggactttttgctccagagccaaagtcctgagtag- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30270 69 + 106623 --ATTCACA--TAGGTTCTCGCTGCCTTTTTGTCTCACTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838425 69 + 123690457 --GTTCACA--CAGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438718 69 + 204787373 --GTTCACA--CGGGTTCTCGctgcctttttgtctcgctggactttttgctacagagccaaagtcctgagtag- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46543 69 + 192460366 --GTTCACA--CGGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522121 69 + 19675229 --GTTCACA--CGGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTgctccagagccaaagtcctgagtag- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457777 69 + 16847902 --GTTCACA--CAGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTgctccagagccaaagtcctgagtag- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394227 69 - 91754291 --GTTCACA--CGGGTTCTCGCTGCCTTTTTGTCTTGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 551431 69 - 1977891 --GTTCACA--CGGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAG- i manLeu1.NW_012102020v1 C 0 M 905 s colAng1.NW_012118932v1 430417 69 + 7796314 --GTTCACA--CGGGTTCCCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 910954 63 - 74750902 --TTTCACA--TGGGTTCTTGCTGCCTTTTTGTCTCG--GGGTCACCTGT--CAGAGC--CAGTCCTGAGTGG- i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 439111 64 + 17725628 --TTTCACA--TGGGTTCTT-CTGCCTTTTTGTCTCG--GGGTCACCTGT--CAGAACCACAGTCCTGAGTGG- i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 401298 62 - 608964 --TTGCATA--TCAGTTCTCAGtgccttttt-tgtcactgagtcacctgttcca------aaatcctgagtgg- i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65420436 69 - 98207768 --CGTCACAAGTGGGTTCCCACTGGGACATCGTCTT--TGGGCTGCTGGTTGCAGGGCCAAAGCTCTGAGCAG- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877652 61 + 6579706 TGTTACAAA--TGg---------gcccctttgtctt--tgggttacttctttcagagtcaaagtaccgggctgg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I a score=299703.000000 s hg38.chr3_KI270779v1_alt 102214 38 + 205312 gaacatttgataggctgagcttagcccttgtactccca s panTro5.chr3 200085862 38 + 202621043 gaacatttgataggccgagcttagcccttgtactccca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65512 38 + 190779 gaacatttgataggccgagcttagcccttgtactccca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30339 38 + 106623 GAACATTTGATAGGCCAAGCTTAGCCCTTGTACTCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838494 38 + 123690457 GAACATTCGATAGGCCGAGCTTAGCCCTTATACTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438787 38 + 204787373 gaacatttgataggccgagcttagcccttgtgctcccg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46612 38 + 192460366 GAACATTTGATAGGCCGAGCTTAGCCCTTGTGCTCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522190 38 + 19675229 gaacatttgataggccgagcttagcccttgtgctcccg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457846 38 + 16847902 gaacatctgataggccgagcttagcccttgtgctcccg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394296 38 - 91754291 GAACATTTGATAGGCCGAGCTTAGCCCTTGTGCTCCCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430486 38 + 7796314 GAACATTTGATAGGCTGAGCTCAGCCCTTGTGCTCCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911017 38 - 74750902 GAATATTCGATAGGCTGAGCTTAGCTCTTGTGCTCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439175 37 + 17725628 GAACATTCGATAGGCGGAGCTTAGCTC-TGTGCTCCCA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 401360 38 - 608964 gaacatatgataagctaagcttagcttttgtgcccaca i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65420505 36 - 98207768 GAGCGTCCAATCAGCCATGTTTGGCTCTTGTACCAC-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3877713 36 + 6579706 gaacatttagtgagctgagcctggttgttacaccca-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e canFam3.chr33 29054300 8 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=1324211.000000 s hg38.chr3_KI270779v1_alt 102252 197 + 205312 tgagcccacagccaggtgccaggggacgggaagaagggatg-----tctgtgtccttggagttctcttagcagcagtgaggccaatcgtgactcc-cactgt----gaggagttccctaaacatggcacgg-gggctcgacacccgatggccaaataagtgacaaatgcccCCGGCATGTGATAAT-CAAAGTAGCGAGTGTGAATCCT s panTro5.chr3 200085900 197 + 202621043 tgagcccccagccaggtgccaggggacgggaagaagggatg-----tctgcgtccttggagttctctcagcagcagcgaggccgatcgtgactcc-cgctgt----aaggagttccctaaacatggcacgg-gggctcgacacccgacggccaaataagtgacaaatgcccCCGGCACGTGATAAT-CAAAGTAGCGAGTGTGAATCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65550 197 + 190779 tgagcccccagccaggtgccaggggacgggaagaagggatg-----tctgcgtccttggagttctctcagcagcagcgaggccaatcgtgactcc-cgctgt----aaggagttccctaaacatggcacgg-gggctcgacacccgacggccaaataagtgacaaatgcccCCGGCACGTGATAAT-CAAAGTAGCGAGTGTGAATCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30377 198 + 106623 TGAGCCCCCAGCCAGGTGCCAGGGGACGGGAAGAAGGGATG-----TCTGCATCCTTGGAGTTCTCTCAGCAGCAGCGAGGCCCATCGTGACTCC-CGCTGT----AAGGAGTTCCCTCAACATGGCACGG-GGGCTCGATACCCAATGGCCAAATAAGTGACAGATGCCCCCGGGACGTGATAATCCAAAGTAGCGAGTGTGAATCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838532 196 + 123690457 TGAGCCCACAGCCAGGTGCCAGGGGATGGGAAGAAGGGATA-----TCTGTGTCCTTGGAGTTCTCTTAGCAGCAGCGAGGCCCATcgtgactcc-cactgt----aaggagttccctaaacatggcacgg-gggtttgacacccgatggccaaataaatgacaaatg-cccCGGCACGTGATAAG-CAAAGCAGCGAGTGTGAATCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202438825 197 + 204787373 tgagtccacagccaggtgccaggggatgggaagaagggata-----tctgcatccttggagttctcttagtggcagcgaggcccatcaagactcc-caccgc----aaggagttccctaaacatagcacgg-agattcgacccccaatggccaaataaatgacaaatgcccCTGGCACGTGACAAT-CAAAGTAGCGAGTGTGAATCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46650 197 + 192460366 TGAGTCCACAGCCAGGTGCCAGGGGATGGGAAGAAGGGATA-----TCTGCATCCTTGGAGTTCTCTTAGTGGCAGCGAGGCCCATCAAGACTCC-TACCGC----AAGGAGTTCCCTAAACATAGCACGG-AGATTCGACCCCCAATGGCCAAATAAATGACAAATGCCCCTGGCACGTGACAAT-CAAAGTAGCGAGTGTGAATCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522228 197 + 19675229 tgagtccacagccaggtgccaggggatgggaagaagggata-----tctgcatccttggagttctcttagtggcagcgaggcccatcaagactcc-caccgc----aaggagttccctaaacatagcacgg-agattcgacccccgatggccaaataaatgacaaatgCTCCCGGCACATGACAAT-CAAAGTAGCGAGTGTGAATCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 457884 197 + 16847902 tgagtccacagccaggtgccaggggatggcaagaagggata-----tctgcatccttggagttctcttagtggcagcgaggcccatcaagactcc-caccgc----aaggagttccctaaacatagcacgg-agactcgacccccgatggccaaacaaatgacaaatgcccCCGGCACGTGACAAT-CAAAGTAGCGATTGTGAATGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394334 194 - 91754291 TGAGTCCACAGC---GTGCCAGGGGATGGGAAGAAGGGATA-----TCTGCATCCTTGGAGTTCTCTTAGTGGCAGCGAGGCCCATCAAGACTCC-CACCGC----AAGGAGTTCCCTAAACATAGCACGG-AGATTCGACCCCCGATGGCCAAATAAAGGACAAATGCCCCTGGCACGTGACAAT-CAAAGTAGCGAGTGTGAGTCCT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430524 193 + 7796314 TCAGTCCACAGCCAGGTGCCA-GGGATGGGAAGAAGGGATA-----TCTGCATCCCTGGAGTTCCCTTAGTGGCAGCGAGGCCCATCAAGACTCC-CACCGC----AAGGAGT---CTAAACATAGCACAG-AGATTCAACATCTGATGGCCAAATAAACGACAAATGCCCCCGGCACGTGACAAT-CAAAGTAGCGAGTGTGAATCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911055 181 - 74750902 T-AGTGCACACCCAGTTGCCAGGGGCTGGGAAGAGGGGATA-----TGGGCATCCCTGACGTTCTCTCCGTGGCAGCGAGGCCCATCATAACTCC-CACTGTCATGGAGGAGCTCCCTGAACATGGCATGG-GGGTTTGATGC-------------------CAGGTGGCCTCGGCACACAGTAAC-CAAAGGAGCACGTGTGGACCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439212 182 + 17725628 C-AGCACACACCTAGTTCTCAGGGGATGGGA--AAGGGTTA-----TCTGCGTCCTTGACGTTCTCTCAATGGCAACG------------ACTCC-CACTGT----GAGGGGTTCCCTGAACACGGCACGG-GGATTTGATGCCACATGGCCAAATAAGTGACAGATGCCCTCGGCACATGGTAGT-CAAAGGAGCAGGTGTGGATCCT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 401398 177 - 608964 tctccccac----------caggggatgggaagagggaata-----tctggatccttgcagctcttttaggggtagagaggcctgcaaggattccttgaaat----agggatttctctaaatgtgaca--g-ggatttgatgtgggatagcccagtaagtgacaaatgcccTTTGTA----------CGAAGTAACAAGTATGTATCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65420541 171 - 98207768 ----------------TACCCAGGGATATTAAGAGGGAATAAATATTCTGGCTTTCCAGA-CTCTCTGGTAACAAGGGAGGCTCAC--TGACCTT-CTTCCT----GAGGATTCCTGTCCATAGAGCATCA-ACGTTTGAT--------GTAGGACAGATGGCAGGTGTCTGTCACA----AACAT-CAAAGTGGCGAGTGCAAATCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29054308 196 + 31377067 TGTGGCCACATCTTGCTGCCAGGGGATGAGAAGGGGGAATA-----ACCGGGCCCTTGAAGTTCTCTTAGTGG-AAAGGGGCCCGTCGGGACTCC-CATAGT----AAGAAGCGCCCTGAACGCCGCATGGCGGCTTTGAAAGTGGACAGC-AGAGACATGACCAATGCCTACCGCGCATGATAAT-CAAAATGGGAAGTGTGAACCCT i canFam3.chr33 I 8 C 0 s dasNov3.JH569502 3877749 180 + 6579706 ---gaccccacc----------gtgaaggggaga--gattc-----tctgaatctctgaagttctcctggtggtagggacgcccaacaggactcc-caaaat----gaggaatttcctaaacatgggatgg-agttttgatat-ggacaaccaagtaaattacaaatccccaTGGCACATGATAAT-C-AAGTAGTAAGTGCAAATCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=65394.000000 s hg38.chr3_KI270779v1_alt 102449 9 + 205312 TGTGGGAGA s panTro5.chr3 200086097 9 + 202621043 TGTGGGAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65747 9 + 190779 TGTGGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30575 9 + 106623 TGTGGGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838728 9 + 123690457 TGTGGGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439022 9 + 204787373 TGTGGAAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46847 9 + 192460366 TGTGGAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522425 9 + 19675229 TGTGGAAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458081 9 + 16847902 TGTAGAAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394528 9 - 91754291 TGTGGAAGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430717 9 + 7796314 TGTGGAAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911236 9 - 74750902 TGTTGAAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439394 9 + 17725628 TGTTGAAGA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 401575 9 - 608964 AGTTGAAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65420712 9 - 98207768 CATGGGAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29054504 9 + 31377067 CGCCAAGGA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e dasNov3.JH569502 3877929 0 + 6579706 C e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=53009.000000 s hg38.chr3_KI270779v1_alt 102458 7 + 205312 GGGAAGC s panTro5.chr3 200086106 7 + 202621043 GGGAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65756 7 + 190779 GGGAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30584 7 + 106623 GGGAAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838737 7 + 123690457 GGGAAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439031 7 + 204787373 GGGAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46856 7 + 192460366 GGGAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522434 7 + 19675229 GGGAAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458090 7 + 16847902 GGGAAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394537 7 - 91754291 GGGAAGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430726 4 + 7796314 GGAA--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911245 7 - 74750902 GGGAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439403 7 + 17725628 GGGAGGC i saiBol1.JH378146 C 0 I 3 s mm10.chr16 65420721 7 - 98207768 GAGAAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29054513 7 + 31377067 GGGAGGC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e dasNov3.JH569502 3877929 0 + 6579706 C e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=7800.000000 s hg38.chr3_KI270779v1_alt 102465 1 + 205312 C s panTro5.chr3 200086113 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65763 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30591 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838744 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439038 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46863 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522441 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458097 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394544 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911252 1 - 74750902 C i calJac3.chr17 C 0 C 0 s mm10.chr16 65420728 1 - 98207768 C i mm10.chr16 C 0 I 26 s canFam3.chr33 29054520 1 + 31377067 C i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e dasNov3.JH569502 3877929 0 + 6579706 C e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e saiBol1.JH378146 439410 3 + 17725628 I e colAng1.NW_012118932v1 430730 0 + 7796314 C e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=5634.000000 s hg38.chr3_KI270779v1_alt 102466 1 + 205312 A s panTro5.chr3 200086114 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65764 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30592 1 + 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838745 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439039 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46864 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522442 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458098 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394545 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430730 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911253 1 - 74750902 G i calJac3.chr17 C 0 I 1 s canFam3.chr33 29054521 1 + 31377067 A i canFam3.chr33 C 0 I 254 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e saiBol1.JH378146 439410 3 + 17725628 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=705187.000000 s hg38.chr3_KI270779v1_alt 102467 185 + 205312 ATTGCttttgttttgttt---tgttttgttttgttttgttttgttttgttttctgagactgagtctcactctgtcatccaagctggagtgcagtggtgcgatcttggctcaccacaacct-ccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcacc s panTro5.chr3 200086115 175 + 202621043 GTTGC----------ttt---tgttttgttttgttttgttttgttttgttttctgagactgagtctcactctgtcgcccaagctggagtgcagtggtgcgatcttggctcaccacaacct-ccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 65765 176 + 190779 GTTGC----------ttt---tgttttgttttgttttgttttgttttgttttctgagactgagtctcactctgtcgcccaagctggagtgcagtggtgcgatcttggctcaccacaacctcccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcacc i panPan2.chrUn_NW_014024201v1 C 0 M 118 s gorGor5.CYUI01000576v1 30593 165 + 106623 GTTCC-----------------------ttttgttttgtttggttttgttttctgagactgagtctcactctgtcgcccaagctggagtgcagtggtgcaatcttggctcaccacaacct-ccgcctcccaggttcaagccattcttctgcctcaactttctgagtagctgggattacaggcccgcacc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120838746 165 + 123690457 Gttgt-----------------------ttttgttttgttttcttttcttttctgagactgagtctcgctctgtcgcccagcctggagtgcaatggtgcgatcttggctcactgcaacct-ccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439040 175 + 204787373 Gttgt----------tta---tgttttgttttgttttgttttgttttgttttCtgagactgtgtctcgctctgttgcccaggctggagtgtagtggtgtgatctcggctcactgcaacct-ccacttcccaggttcaagacattctcctgcctccgcctcccgagtagctgggattacaagcccgcgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 46865 174 + 192460366 Gttgt----------tta---tgttttgttttgttttgttttgttttgttttCtgagactgtgtctcgctctgtcg-ccaggctggagtgtagtggtgagatctcggctcactgcaacct-ccacctcccaggttcaagacattctcctgcctccgcctcccgagtagctgggattacaagcccgcgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522443 177 + 19675229 GTTGt----------ttgttttgttttgttttgttttgttttgttttgttttCtgagactgtgtctcgctctgtcg-ccaggctggagtatagtggtgagatctcggctcactgcaacct-ccacctcccaggttcaagacattctcctgcctccgcctcccgagtagctgggattacaagcccgcgcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458099 168 + 16847902 GTTGt----------ttg----------ttttgttttgttttgttttgttttCtgagactgtgtctcgctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaacct-ccacctcccaggttcgagacattctcctgcctccgcctcccgagtagctgggattacaagcccgcgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394546 165 - 91754291 Gttgt----------tta-------------tgttttgttttgttttgttttctgagactgtgtctcactctgttgcccaggctggagtatagtggtgcgatctcggctcactgcaactt-ccacctcccaggttcaagacattctcctgcctccgcctcccgagtagctgggattacaaacctgcgcc i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430731 160 + 7796314 Gttgt----------ttt------------------tgttttgttttgttttccgagactgtgtctcgctctgttgcccaggctggagtgcggtggtgcaatctcggctcactgcaacct-ccacctcccaggttcaagacattctcctgcctccgcatcccatgtagctgggattacaagcccgtgcc i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e calJac3.chr17 911254 1 - 74750902 I e saiBol1.JH378146 439410 3 + 17725628 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=636349.000000 s hg38.chr3_KI270779v1_alt 102652 194 + 205312 accatacctggctaatttttgtatttttagtagagatggagtttcaggtttcagcatcttggccaggctagtcttgaactcttgacctcatgatcca--cccacctcagcctcccaaagtgctgggattacaggcgttgagtcattgcgtccggcTGGGAAGCCAGttttctttttctttttctttttctttctct-------------------- s panTro5.chr3 200086290 190 + 202621043 accatacctggctaatttttgtatttttagtagagatggagtttcaggtttcagcatcttggccaggctagtcttgaactcttgacctcgtgatcca--cccacctcagcctcccaaagtgctgggattataggcgttgagtcattgcgcccggcTGGGAAGCCAGT----tttttctttttctttttctttctct-------------------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 30758 194 + 106623 accatacctgactaatttttgtatttttagtagagatggagtttcaggtttcagcatcttggccaggctagtcttgaactcttgatctcgtgatcca--cccacctcagcctcccaaagtgctgggattacaggcgttgagtcattgcgccctgcTGGGAAGCCAGttttgtttttctttttctttttctttctct-------------------- i gorGor5.CYUI01000576v1 C 0 I 1 s nomLeu3.chr11 120838911 180 + 123690457 accatacccggctaatttttgtatttttaggagagatggagtttcaggtttcaccatgttggtcaggctagtcttgagctcttgaccttgtgatcca--cccgcctcggcctcccaaagtgccgggattataggca-tgagtcattgcgcctggcTGGGAAGCCAGt-------tttgttttctttttct-------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439215 190 + 204787373 agcaaacc-ggctaattttt--atgtttagtagagacagggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatcca--ctcacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcctggcTGGAAAGCCAGT----TTTGTTTTtttctttttctctctctc----------------tct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47039 192 + 192460366 agcaaacc-ggctaatttttacatgtttagtagagacagggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatcca--ctcacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcctggcTGGAAAGCCAGT----TTTGTTTTtttctttttctctctctc----------------tct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522620 202 + 19675229 agcaaacc-ggctaatttttatatgtttagtagagacggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatcca--ctcacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcctggcTGGAAAGCCAGT----tttgtttttttctttttctctctctc------tctttctctttct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458267 192 + 16847902 agcaaacc-ggctaatttttacatgtttagtagagatggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatcca--cccacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcctagcTGGAAAGCCAGt----tttgtttttttctttttctttttctc----------------ttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394711 208 - 91754291 agcaaacc-agctaatttttatatgtttagtagagacggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttctgatcca--cccacctcagcctcccaaagtgctgggattacaggcg-tgagtcattgcgcctggcTGGAAAGCCAGT----TTTGTTTTtttctttttctctttctctttctctctttctctttct i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 430891 202 + 7796314 agcaaacc-ggctactttttatatgtgtagtagagacggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatccacccccccctcagcctcccaaagtgctgggattacaggcg-tgagtcattgcgcctggcTGGAAAGCCAGt----tttgtttttttctttttctttttctc--------tttctctctct i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e panPan2.chrUn_NW_014024201v1 65941 118 + 190779 M e calJac3.chr17 911254 1 - 74750902 I e saiBol1.JH378146 439410 3 + 17725628 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=16989.000000 s hg38.chr3_KI270779v1_alt 102846 5 + 205312 ttttc s panTro5.chr3 200086480 5 + 202621043 ttttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66062 5 + 190779 ttttc i panPan2.chrUn_NW_014024201v1 M 118 C 0 s gorGor5.CYUI01000576v1 30953 5 + 106623 ttttc i gorGor5.CYUI01000576v1 I 1 C 0 s rheMac8.chr2 202439405 5 + 204787373 ttctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47231 5 + 192460366 ttctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522822 5 + 19675229 ttctc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458459 5 + 16847902 ctctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394919 5 - 91754291 ttctc i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 431093 5 + 7796314 ttctc i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e calJac3.chr17 911254 1 - 74750902 I e saiBol1.JH378146 439410 3 + 17725628 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M e nomLeu3.chr11 120839091 0 + 123690457 C a score=91968.000000 s hg38.chr3_KI270779v1_alt 102851 21 + 205312 ttttcttttcttttatttttc--- s panTro5.chr3 200086485 21 + 202621043 ttttcttttcttttatttttc--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66067 20 + 190779 ttttcttttc-tttatttttc--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30958 21 + 106623 ttttcttttcttttatttttc--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839091 21 + 123690457 tttttttttcttttctttttc--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439410 21 + 204787373 tttctctttctcttctttttc--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47236 21 + 192460366 tttctctttctcttctttttc--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522827 21 + 19675229 tttctctttctcttctttttc--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458464 21 + 16847902 tttctttttctcttctttttc--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394924 21 - 91754291 tttctctttctcttctttttc--- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 431098 21 + 7796314 tttctctttctcttctttttc--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911255 24 - 74750902 ttttctttccttttatttattgct i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 439413 24 + 17725628 ttttgtttccttttattcattgtt i saiBol1.JH378146 I 3 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I e aotNan1.NW_018503669v1 55580 490 - 69927 I e cebCap1.NW_016107444v1 401304 1290 - 6778120 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=1070409.000000 s hg38.chr3_KI270779v1_alt 102872 136 + 205312 ttgagacagattctcgctctgtcgtccag-----gctggagtgcaatggcacgatctcggctcactgcaacctccacctcccggattcaagcaattctcctgcctcaacctccctagtagctgggattacaggtgcacact s panTro5.chr3 200086506 136 + 202621043 ttgagacggattctctctctgtcgtccag-----gctggagtgcaatggcatgatctcggctcactgcaacctccgcctcccggattcaagcaattctcctgcctcaacctccctagtagctgggattacaggtgcacact i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66087 136 + 190779 ttgagacggattctctctctgtcgtccag-----gctggagtgcaatggcatgatctcggctcactgcaacctccacctcccggattcaagcaattctcctgcctcaacctccctagtagctgggattacaggtgcacact i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 30979 136 + 106623 ttgagacggattctcgctctgtcgtccag-----gctggagcacaatggcatgatctcggctcactgcaacctccacctcccggattcaagcaattctcctgcctcaacctccctagtagctgggattacaggtgcacact i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839112 136 + 123690457 ttgagacagattctcgctctgtcatccag-----gctggagtgcaatggcgcaatcttggctcactgcaacctctgcctcccagattcaagcgattctcctgcctcaacctccctagtagctgggattacaggcgcccacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439431 141 + 204787373 ctgagacagattctcactctgttgttcagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctccgcctccctggttcaagcaattctcctgcctcagtctcctgagtacctgggactacaggcacccgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47257 141 + 192460366 ctgagacagattctcactctgttgttcagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagtctcctgagtacctgggactacaggtgcccgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522848 141 + 19675229 ctgagacagattctcactctgttgttcagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtctcctgagtacctgggactacaggtgcccgcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458485 141 + 16847902 ttgagacagattctcgctctgttgtccagagtgcagtggagtgcaatggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagtctcctgagtacctgggattacaggtgcctgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 394945 141 - 91754291 ctgagacagattctcgctctgttgtccagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtctcccgagtagctgggattacaggtgcccacc i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 431119 141 + 7796314 ttgagacagattctcgctctgttgtccagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctccgcttcccaggttcaagcaattctcctgcctcagtctcccgagtagctgggattacaagtgcctgcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911279 134 - 74750902 ttgagac--agtctcgctctgtcgtccgg-----gctgaagtgcgatgctgtgatcttggctcactgcaacctccgtctcccgggttcaagtgattgtcctgccttggcctcctgagtagctgggattggaggtgcccacc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439437 136 + 17725628 tggagacagagtctcgctctgttgtccag-----gctgaagtgcgatggcgtgatcttggctcaccgcagcctccgtctcctggcttcaagtgattctcctgcctcggcctcctgagtagctgggattagaggtgcccacc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402594 136 - 6778120 ttgagacagcgtctcgctctgtcgtccag-----gctgaagtgcaatggcgtgatcttggctccctgcaacctccgtctcctgggttcaagtgattctcctgcctcagcctcctgagtaactgggattagaggcgcccacc i cebCap1.NW_016107444v1 I 1290 C 0 s aotNan1.NW_018503669v1 56070 136 - 69927 ttgagacagagtctcactctgtcgtccag-----gctgaagtgcgatggcgtgatcttggctcaccacaacctccgtctcctgggttcaagtgactctcctgcctcggcctcctgagtagctgggattacaggcgcccgcc i aotNan1.NW_018503669v1 I 490 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I e manLeu1.NW_012102020v1 551500 905 - 1977891 M a score=1374547.000000 s hg38.chr3_KI270779v1_alt 103008 148 + 205312 accactcctggctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgacccacctgcctctgcttcccaaagcactgggattattggcgtgag-ccaccgcacccggcc s panTro5.chr3 200086642 148 + 202621043 accactcctggctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgacccacctgcctctgcttcccaaagcactgggattattggcgtgag-ccaccgcacccagcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66223 148 + 190779 accactcctggctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcgggtgacccacctgcctctgcttcccaaagcactgggattattggcatgag-ccaccgcacccggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31115 148 + 106623 accactcctggctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgacccacctgcctctgcttcccaaagcactgggattattggcatgag-ccactgcacccggcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839248 148 + 123690457 accactcctggctaatttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaacacctgacctaaggtgacccacccacctctgtttcccaaagcactgggattattggtgtgag-ccactgcacccggcT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439572 148 + 204787373 accactcccggctgatttttgtatttttagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcaaatgacccacccgcctcagcttcccaaagcactgggattattggcgtgag-ccaccgcatctagcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47398 148 + 192460366 accactcccggctgatttttgtatttttagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcaaatgacccacccgcctcagcttcccaaagcactgggattattggcgtgag-ccaccgcatctagcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 522989 148 + 19675229 accactcccggctgatttttgtatttttagcagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcaaatgacccacccgcctcagcttcccaaagcactgggattattggcgtgag-ccaccgcatctagcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458626 148 + 16847902 accactcccggctgatttttgtatttttagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcagatgacccacccgcctcagcttcccaaagcactgggattattggcgtgag-ccaccgcatctagcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395086 148 - 91754291 agcacacccggctgatttttgtgtttttagtagagacggggtttctccatgttgatcaggttggtcttgaactcctgacatcaggtgacccatccacctcagcttcccaaagcactgggattattggcgtgag-ccaccgcacctagcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552407 148 - 1977891 accactcccggctgatttttgtatttttagtagagacggggtttctccctgttggtcaggttggtcttgaactcctgacatcagatgacccacccgcctcagcttcccaaagcactgggattattggcgtgag-ccactgcatctagcc i manLeu1.NW_012102020v1 M 905 C 0 s colAng1.NW_012118932v1 431260 148 + 7796314 accactcctggctagtttttgtatttttagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcaggtgacccacccgcctcagcttcccaaagcactgggattactggcgtgag-ccaccacacctagcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911413 148 - 74750902 accacacctggctaatttttgtatttttagtagagacagggccttgccatgttggccaggctggtcttgaactcctgacttcaggaaatccacctgcctcggcttcccaaagtgatgggattatgggtgtgag-cccccgtgcccagcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439573 146 + 17725628 accacacctggataa-ttttgtaattttagtagagacggg--tttgccatgttggccaggctggtcttgaactcctgacctcaggtaattcacctgcctcagcctcccaaagtgatgggattatgggcgtgagccccccgtgcccggcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402730 148 - 6778120 accacacctggctaatttttgtattttgagtagagacaggggtttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcttcggcctcccagagtgatgggattatggccgagag-cccccgtgcccggcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56206 148 - 69927 accacacctggctaatttttgtatttttagtagagacaggggtttgccatgttggccaggctggtcttgaactcctgatctcaggtgatccacctgcctcggcctcccagagtgatgggattacgggcgtgag-cccccgtgcccggcc i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e otoGar3.GL873829 401584 0 - 608964 C e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I a score=31116.000000 s hg38.chr3_KI270779v1_alt 103156 3 + 205312 GGG s panTro5.chr3 200086790 3 + 202621043 GGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66371 3 + 190779 GGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31263 3 + 106623 GGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839396 3 + 123690457 GGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439720 3 + 204787373 AGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47546 3 + 192460366 AGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523137 3 + 19675229 AGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458774 3 + 16847902 AGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395234 3 - 91754291 AGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552555 3 - 1977891 GGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431408 3 + 7796314 GGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911561 3 - 74750902 AGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439719 3 + 17725628 AGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402878 3 - 6778120 AGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56354 3 - 69927 GGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401584 3 - 608964 GGG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e mm10.chr16 65420729 26 - 98207768 I e dasNov3.JH569502 3877929 0 + 6579706 C e canFam3.chr33 29054522 254 + 31377067 I a score=177325.000000 s hg38.chr3_KI270779v1_alt 103159 17 + 205312 AAGCCAGTTTTGAATCT s panTro5.chr3 200086793 17 + 202621043 AAGCCAGTTTTGAATCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66374 17 + 190779 AAGCCAGTTTTGAATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31266 17 + 106623 AAGCCAGTTTTGAATCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839399 17 + 123690457 AAGCCAGTTTTGAATCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439723 17 + 204787373 AAGCCAGTTTTGAGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47549 17 + 192460366 AAGCCAGTTTTGAGTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523140 17 + 19675229 AAGCCAGTTTTGAGTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458777 17 + 16847902 AAGCCAGTTTTGAGTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395237 17 - 91754291 AAGCCAGTTTTGAATCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552558 17 - 1977891 AAGCCAGTTTTGAATCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431411 17 + 7796314 AAGCCAGTTTTGAATCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911564 17 - 74750902 AAGCCAGGTTTGAATGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439722 17 + 17725628 GAGCCAGGTTTGACTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402881 17 - 6778120 AAGCCAGGTTTGAATGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56357 17 - 69927 AAGCCAGGTTTGAATGT i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401587 17 - 608964 AAGCCGGGGTCAGACGT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3877929 17 + 6579706 AAGTCGGAGTTGAGTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e mm10.chr16 65420729 26 - 98207768 I e canFam3.chr33 29054522 254 + 31377067 I a score=178932.000000 s hg38.chr3_KI270779v1_alt 103176 16 + 205312 CAGGTCTAAGCCCCCA s panTro5.chr3 200086810 16 + 202621043 CAGGTCTAAGCCCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66391 16 + 190779 CAGGTCTAAGCCCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31283 16 + 106623 CAGGTCTAAGCCCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839416 16 + 123690457 CAGGTCTAAGCCCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439740 16 + 204787373 CAGGTCTGCGCTCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47566 16 + 192460366 CAGGTCTGCGCTCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523157 16 + 19675229 CAGGTCTGCGCTCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458794 16 + 16847902 CAGGTCTGCGCTCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395254 16 - 91754291 CAGGTCTGCGCTCCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552575 16 - 1977891 CAGGTCTGCGCTCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431428 16 + 7796314 CAGGTCTGCGCTCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911581 15 - 74750902 CAGGTCTGAACCCCC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439739 16 + 17725628 GAGGTCTGAACCCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402898 16 - 6778120 CAGGTCTGAACCCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56374 16 - 69927 CAGGTCTGAACCCCCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401604 16 - 608964 CAGATCTGAACCACCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29054776 16 + 31377067 CAGATGCGAGCCCCCT i canFam3.chr33 I 254 I 1 s dasNov3.JH569502 3877946 16 + 6579706 CAGGCCTGAGCCCCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e mm10.chr16 65420729 26 - 98207768 I a score=993307.000000 s hg38.chr3_KI270779v1_alt 103192 91 + 205312 AACCAGAAATGATTTCAGGAATCGGAAAGA-AACCG-CGAGATCAGGAGCAGGTCAAGCAGCTGAGGCGCAGGCACCAGGCCACATGG-GGTTG s panTro5.chr3 200086826 91 + 202621043 CACCAGAAATGATTTCAGGAATCGGAAAGA-AACCG-GGAGATCAGGAGCAGGTCAGGCAGCTGAGGCACAGGCACCAGGCCACGTGG-GGTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66407 91 + 190779 CACCAGAAATGATTTCAGGAATCGGAAAGA-AACCG-GGAGATCAGGAGCAGGTCAGGCAGCTGAGGCACAGGCACCAGGCCACGTGG-TGTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31299 90 + 106623 AACCAGAAATGATTTCAGGAATCGGAAAGA-AACCG-GGAGATCAGGAGCAGGTCAGGCAGCTGAGGCGCAGGCACCAGGCCACGTGG--GTTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839432 91 + 123690457 AACCAGAAATGATTTCAGGAATCGGAAAGA-AACTG-GGAGATCAGGAGCAGGTCAAGCAGCTGAGGCGCAGGCACCAGGCCATGTGG-GGTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439756 91 + 204787373 AACCGGAAACGATTTCAGGAATCGGAAAGA-AATCG-GGTGATCAGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47582 91 + 192460366 AACCGGAAACGATTTCAGGAATCGGAAAGA-AACTG-GGTGATCAGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523173 91 + 19675229 AACCGGAAATGATTTCAGGAATCGGAAAGA-AACTG-GGTGATCAGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458810 91 + 16847902 AACCGGAAATGATTTCAGGAATCGGAAAGA-AACTG-GGTGATCAGGAGCAGGTCGGGCAGCGGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395270 91 - 91754291 AACCGGAAATGATTTCAGGAATCGGAAAGA-AACTG-GGTGATCAGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552591 91 - 1977891 AACCGGAAATGATTTCAGGAATCGGAAAGA-AACCG-GGTGATCAGGAGCAGGTCGGGCAGCGGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431444 91 + 7796314 AACCGGAAACGATTTCAGGAATCGGAAAGA-AACCG-GGTGATCAGGAGCAGGTCAGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911596 78 - 74750902 -----GAAATGATTTCAGGAATCGGAAAGA-CACC----------GGAACAGGCCCGGTAGCTGAGGCGCAGGCACCAGGCCATGTGGAGGTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439755 82 + 17725628 AACAGGAAATGATTTCAGGAATCGGAAAGA-CACT----------GGAACAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCATATGGGGGTT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402914 83 - 6778120 AACAGGAAATGATTTCAGGAATTGGAAAGA-CACT----------GGAACAGGTCAGGCAGCTGAGGCGCAGGCACCAGGCCATGTGGGGGTTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56390 83 - 69927 AACAGGAAATGATTTCTGGAATCGGAAAGA-CACT----------GGAACAGGTCAGGCAGCTGAGGCGCAGGCACCAGGCCACGTGGGGGTTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401620 86 - 608964 AGCTGAAAGCTATTTCAGGAATCAGAAAAAGAACAG-GGAGATCAGGAGCTGGCTGGACTGTTGAGGTGCAGGTGCCAGGC--TGTAG-----G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65420755 92 - 98207768 AACTAGCAGATGTTTCAGAGGTCAGAGAGC-AACCGTGGAGTTCAGGATCAGGTCAGGCAGCTGAGGTCTAGGAGTGAGGCCACATGG-GATTG i mm10.chr16 I 26 I 279 s canFam3.chr33 29054793 86 + 31377067 AACTGGAAACCATTTCAGGAGTCAGAAAGG-GGCCA-GGGAGGAGGAAGCAGGTCAGG-AGCTGAAGTGCAAGCACCATGC----GGG-TGCTG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3877962 88 + 6579706 AGCAGGAAACTATTTCAGGTGTC----AGA-AACAG-GGGCCTCAGAAGCAGGTCAGGCAGCTGTGGTTCAGGAACCAGGCCACCAGGGAGATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I a score=355389.000000 s hg38.chr3_KI270779v1_alt 103283 40 + 205312 GGCATCAGTTCTC--GTCCGGGGACAGCCCAacag--t-ttgggc s panTro5.chr3 200086917 40 + 202621043 GGCATCAGTTCTC--GTCCGGGGACAGCCCAACAG--T-TTGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66498 40 + 190779 GGCATCAGTTCTC--GTCCGGGGACAGCCCAACAG--T-TTGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31389 40 + 106623 GGCATCAGTTCTC--GTCCGGGGACAGCCCAacag--t-ttgggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839523 42 + 123690457 GGTGTCAGTTCTCGTGTCCGGGGACAGCCCAACAG--T-TTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439847 39 + 204787373 GGCGTCAGTTCTC--GTCCGGGGACAGCCC-ACGG--T-TTGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47673 39 + 192460366 GGCGTCAGTTCTC--GTCCGGGGACAGCCC-ACGG--T-TTGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523264 39 + 19675229 GGCGTCAGTTCTC--GTCCGGGGACAGCCC-ACGG--T-TTGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458901 39 + 16847902 GGCGTCAATTCTT--GTCCGGGGACAGCCC-ACGG--T-TTGGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395361 38 - 91754291 GGCGTCAGTTCTC--GTCCGGGAACAG-AC-ACGG--T-TTGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552682 39 - 1977891 GGCGTCAGTTCTC--GTCCGGGGGCAGCCC-ATGG--T-TTGGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431535 38 + 7796314 GGTGTCAGTTCTC--GTCCAGGAACAG-CC-ACGG--T-TTGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911674 39 - 74750902 GGTGTCAGTTCTT--GTCTGGGGACAGCTg-acag--t-ttgggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439837 39 + 17725628 GGCGCCAGTTCTT--GTCCGGGTACAGCTg-acag--t-ttgggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 402997 38 - 6778120 GGCGCCCGTTCTT--GTCCAGGGACAGCCg-acag----ttgggc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56473 39 - 69927 GGCTTCAGTTCTT--GTCCGGGGACAGCTG-ACAG--C-TTGGGC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401706 40 - 608964 GGTGTGGGTTCTC--ATTGGGGAGCTACCACTGGG--G-TAGGAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29054879 40 + 31377067 GGTGTGAGTTCTC--GTT-GGGAGTAGGAC-ACAGACC-CAGGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878050 39 + 6579706 GGTGTCAATTCTT--GTT-GGGAGCCACTG-GCGG--TGCAGGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I e mm10.chr16 65420847 279 - 98207768 I a score=142165.000000 s hg38.chr3_KI270779v1_alt 103323 12 + 205312 tcggggattaga s panTro5.chr3 200086957 12 + 202621043 TCAGGGATTaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66538 12 + 190779 TCAGGGATTaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31429 12 + 106623 tcagggattaga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839565 12 + 123690457 TCAGGGATTaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439886 12 + 204787373 TCAggaattaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47712 12 + 192460366 TCAggaattaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523303 12 + 19675229 TCAggaattaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458940 12 + 16847902 TCAggaattaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395399 12 - 91754291 TCAggaattaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552721 12 - 1977891 TCAggaattaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431573 12 + 7796314 TCAggaattaga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911713 12 - 74750902 tcagggattgga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439876 12 + 17725628 tcagggattaga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403035 12 - 6778120 tcagggattaga i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56512 12 - 69927 TCagggattaga i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 401746 12 - 608964 TCGGGGGTCAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65421126 12 - 98207768 TTGAGATCTGGC i mm10.chr16 I 279 C 0 s canFam3.chr33 29054919 6 + 31377067 TCGggg------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878089 12 + 6579706 TCAGAGGTCAGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7405629 482 + 22200726 I e micMur3.chr1 25886354 475 - 114275543 I a score=7611329.000000 s hg38.chr3_KI270779v1_alt 103335 561 + 205312 ----caatgagcttaggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtgatcttggataagttattctatgcgactttcatcccttataaaatgaggatcctaacacctgctttataaggttgctgtgaggtttagatgacataatgtgtgtgaggcacc-agcctgtgtccagca-tgtaggaggcccaggaagggt-----------------------------------------------------------------------------------tgCCGTCCTCCGCATGCAC----TCTGCCCCAGTGTCCCTTCCT-GTCCTCTGCCTCTGGCGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCTTTT-GCTCTCCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGTGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAG-G----GTGCTGCCCCTAGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACTGTGCTGAGAGGTACCCAGAAGGTTCCCAT-----GAAGGGCAGCATGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCACAT s panTro5.chr3 200086969 560 + 202621043 ----caatgagcttaggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtgatcttggataagttattctatgcgactttcatcccttataaaatgaggatcgtaacacctgctttataaggttgctgtgaggtttagatgacataatgtgtgtgaggcacc-agcctgtgtccagca-tgtaggagg-cCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCGCATGCAC----TCTGCCCCAGTGTCCCTTCCT-GTCCTCTGCCTCTGGCGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGACTCTCTT-GCTCTCCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGTGTCAGGAGAGGCTAATGGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAG-G----GTGCTGCCCCTAGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACTGTGCTGAGAGGTACCCAGAAGGTTCCCAT-----GAAGGGCAGCAGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 66550 560 + 190779 ----caatgagcttaggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtgatcttggataagttattctatgcgactttcatcccttataaaatgaggatcgtaacacctgctttataaggttgctgtgaggtttagatgacataatgtgtgtgaggcacc-agcctgtgtccagca-tgtaggagg-cCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCGCATGCAC----TCTGCCCCAGTGTCCCTTCCT-GTCCTCTGCCTCTGGCGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCTCTT-GCTCTCCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGTGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAG-G----GTGCTGCCCCTAGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACTGTGCTGAGAGGTACCCAGAAGGTTCCCAT-----GAAGGGCAGCAGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 31441 562 + 106623 ----caatgagcttaggaaccagctagatctgggtgtgacttctagt------tcccaactgtgtgatcttggataagttattctatgagactttcatcccttataaaatgaggatcgtaacacctgctttataaggttgctgtgaggtttagatgacataatgtgtgtgaggcacc-agcctgtgtccagcaTTGTAGGAGGCCCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCGCATGCAC----TCTGCCCCAGTGTCCCTTCCT-GTCCTCTGCCTCTGGTGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCTCTT-GCTCTCCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGTGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTGCCGTGTGCCAAAAGAG-G----GTGCTGCCCCTAGCCCGGG-CCT-----CCACCGACAGACTGCAGCTGTGTTACTGTGCTGAGAGGTACCCAGAAGGTTCCCAT-----GAAGGGCAGCAGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCACAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120839577 558 + 123690457 ----caatgagcttcggaaccagctggatctgggtgtgaattctagt------tcccaactgtgtgatcttcgataagttattccacgcgactttcatcccttataaaatgaggatcgtaacacctgctttacaaggttgctgtgaggtctagatgacataatgtgtgtgaggcacc-agcctgtgtcgggca-tgtaggaggcCCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCGCATGCAC----TCTGTCCCACTGTCCCTTCCT-GTCCTCTGCCTGTGGTGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCCCTT-GCTCTCCAGCTCCGCCGGGAACTCCATGCCCACGTGCCTCGCCTCCAGGTCTCCTTACTGCGCGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTCCTGTACACCAAAAGAG-G----GTGCTGCCCC-GGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACGGTGCTGAGAGGTACAC--AAGGTTCCCAG-----GAAGGGCAGCAGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCCCGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202439898 561 + 204787373 ----caatgagcgtcggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttataaggtttctgtgaggtttagatgacataatgtgtgggaagcacc-agcctgtgtccggca-tgtaaggggtccaggaagggt-----------------------------------------------------------------------------------tgcCGTCCATCACATGCAC----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCTGTATGCCAAAAGAA-G----GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGATGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCTGT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGA-CCTCGCTCACGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 47724 561 + 192460366 ----caatgagcttcggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttaaaaggtttctgtgaggtttagatgacataatgtgtgtgaagcacc-agcctgtgtccagca-tgtaaggggtccaggaagggt-----------------------------------------------------------------------------------tgctGTCCATCACATGCAC----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCTGTATGCCGAAAGAA-G----GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCTGT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGA-CCTCGCTCACGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523315 561 + 19675229 ----caatgagcttcggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttataaggtttctgtgaggtttagatgacataatgtgtgggaagcacc-agcctgtgtccagca-tgtaagtggtccaggaagggt-----------------------------------------------------------------------------------tgccgtccatcaCATGCAT----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAA-G----GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCTGT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGA-CCTCACTCACGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 458952 561 + 16847902 ----caatgagcgtcggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttataaggtttctgtgaggtttagatgacataatgtgtgtgaaGCACC-AGCCTGTGTCCAGCA-TGTAAGGGGCCCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCACATGCAC----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTGTGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGCGACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCTGTACGCCAAAAGAA-G----GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCCGT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGA-CCTCGCTCACGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395411 561 - 91754291 ----caatgagcttcggaaccagctagatctgggcgtgaattctagt------ccccaactgtgtggtcttggataagttattctctgcgactttgatcccttataaaatgaggatcgtaacacctgctttataaggtttctgtgaggtttagatgacatcatgtgtgtgaagcacc-agcctgtgtccagca-cgtaagGGGCCCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCACATGCGC----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTACGGTGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGGGACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTGCTGCGCGTCAGGAGAGGCTAACAGACATCGGCTGCAGCCAGGCCTGTCCCGTACGCCAAAAGAA-G----GTGCTGCCCATGGCCTGGG-CCC-----CCACCCACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCCAGAAGTTTCCTGT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCTAGATGTGGCAACAGGA-CCTCGCTCACGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 552733 561 - 1977891 ----caatgagcgtcggaaccagctagatctgggtgtgaattctagt------tcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttataaggtttctgtgaggtttagatgacataatgtgtgtgaaGCACC-AGCCTGTGTCCAGCA-TGTAAGGGGCCCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCACCACATGCAC----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGCGACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCCGTACGCCAAAAGAA-G----GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCCGT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCTAGATGTGGCAACAGGA-CCTCGCTCACGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 431585 559 + 7796314 ----caatgagcgtcggaactagctagatctgggtgtgaattctagt------tcccagctgtgtgatcttggataagttattctatgcgactttcatcccttataaaatgaggatcataacacctgctttataaggtttctgtgaggtttagatgac---atgtgtgtgaagcacc-agcctgtgtccagca-TGTCAGAGGCCCAGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCACATGCGC----TCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCCTGGGTCAGAT--AGGCTGAAAGGACCACCTGGCTCCCTT-GTTCTCCAGCTCCGCCAGGGACTCCACGCCGACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAA-G----ATGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCGTTACTGTGCTGAGAGGTACCCAGAAGTTTCCCAT-----GAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGACAACAGGACCCTCGCTCACGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 911725 559 - 74750902 ----caatggactttggaaccagccagatttgggtgtgaattctagt------tcctaactgtgtggcgttggatgagtgattcgttgcgactttcgtcccttacaatatgagggtcataacacctgctttataaggttgctgtgaagttttgatgacat--cgtgtgtgaagcccccagcctgagtctagcG-TGTGGGAGGCCCGGGGAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCTCACGCGC----TCTG-CCCACTGTCCCTTCCT-GTCCTCTGCCTGTGGTGAGCTCACGGG-CAGAT--GGTCTGAAAGGACCGCCTGGCTCCCTT-GCTCTCCAGGTCCGCCGCGAACTCCACGCCCACGTGCCTCTCCTCCAAGTCTCCTTACTGCGCATCAGGAGAGGCTAGCGGACATCAGCTGCAACCAGGCATGTTTCATATGCCAAAAGAG-G----GGGCTGCCCACGGCCTGGG-CCC-----CTACCAGCAGACTGGAGCTGCATTGCTGTGTGGAGAGGCACCCAGAAGTTTCTCAT-----GAAGGGCAGCCGGCCCAAGCCCCTCACCCCAGATGTGGTAACAGGACCCTAGCTCCCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 439888 643 + 17725628 ----caatggactttggaaccagccagatctgggtgtgaattctggt------tcctaactgtgtggtcctgcatgagtgatcccgtgtgactttcatcccttacaatgtgaggatcgtaacacctgctttgtacggttgctgtgaagtttagatgacat--cgcgtgtgaagcccctggccggagtctagca-tgtgggaggcCCGGGAAGGGTTGCTGGTCAGATGGTGGGAGCACACTGGCTGGGACATGGTCACTCTTGCTGGTGAGATGGTGGGAACACGCGGGCTGGGACCCTGCCGTCCTCCTCATGCGC----TCTGCCCCACTGTCCCTTCCT-GTCCGCTGCCTGTGGTGAGCTCACGGGCCAGAT--GGGCGGAAAGGACCACC-GGCTCCCTT-GCTCTCCAGGTCCGCCGTGAACTCCACGCCCACATGCCTCTCCTCCAAGTCTCCTTACTGCGCGTCAGGAGAGGCTAGCGGACATCGGCTGCAACCAGGCATGTTGCATATACCAAAAGAG-G----GGGCTGCCCATGGCCTGGG-CCC-----CCACCAGCAGACTGGAGCTGCGTTGCTGTGTGGAGAGGTACCCAGAAGTTTCTCAT-----GAAGGGCAGCCGGCCCAAGCCCCTCACCCGAGATGTGGCAGCAGGACCCTAGCTCCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403047 554 - 6778120 ----caatggactttggaaccagccagatctgggtgtgaattctggc------tcctaactctgtggtcttggatgagtgattccatgcgacttgcatcccttacaatgtgaggatcataacacctgctttataaggttgccgtgaagtttagatgacat--cgtgtgtgaagcccctggccagagtctagca-tgtgggaggcCCGGGAAGGGT-----------------------------------------------------------------------------------TGCTGTCCTCCTCACGTGC----TCCGCCCCACTGTCCCTTCCT-GTCCTCTGCCTGTGGTGAGCTCACGGGCCAGAT--GGGCTGAAAGGAACACCTGGCTCCCTT-GCTGTCCAGGTCCGCCGTGAACTCCACGCCCACGTGCCTCTCCTCCAAGTCTCCTTGCTGCGCGTCAGGAGAGGCTAGCGGACATCAGCTGCAACCAGGCATGTTTCATATGCCAAAAGAG-G----GGGCT-------GCCTGGG-CCC-----CCACCAGCAGACCGGAGCTGCGTTGCTGTGTGGAGAGGTACCCAGAAGTTTCTCAT-----GAAGGGCAGCTGGCCCAAGCCCCTCACCCCAGATGTGGCAACAGGACCCTAGCTCCCGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 56524 561 - 69927 ----cgatgaactgtggaaccagccagatctgggtgtgaattctagt------ttctaaccgtgtggtcttggatgagtgattccatgcgactttcatcccttacaatatgaggatcgtaacacctgctttacaaggttgctgtgaagtttagatgaCAT--CGTGTGTGAAGCCCCTAGCCTGAGTCTAGCA-TGTGGGAGGCCCGGGAAGGGT-----------------------------------------------------------------------------------TGCCGTCCTCCTCACGCGC----TCTGCCCCGCTGTCCCTTCCT-GTCCTCTGCCTGTGGTGAGCTCACAGGCCAGAT--GGGCTGAAAGGACCGCCTGGCTCCCTC-GCTCTCCAGGTCCGCCGAGAACTCCACGCCCACGTGCCTCTCCTCGAAGTCTCCTTACTGCGCGTCAGGAGAGGCTAGTGGACACCAGCTGCAACCGGGCGTGTTTCATACACCAAAAGAG-G----GGAGTGCCCGTGACCTGGG-CCC-----CCGCCAGCAGACCGGAGCTGCGCTGCTGTGTGGAGAGGTGCCCAGAAGTTTCTCAT-----GAAGGGCAGCCGGCCCAAACCCCTCACCCCAGATGTGGTAACAGGACCCCAGCTCCCGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25886829 562 - 114275543 ----caatgagctttggagcaagataggtctcggcatgaattctagt------tcctaactgtgtgaccat-ggtaagttattctatattactttcatcccatataaaatgag---aataacatctgctttataaggttgctgcagggtttaaatgatataacgtgtgtgaagcacccagccgatgttcagca-tgtgggaggctcaggaagtgt-----------------------------------------------------------------------------------tgctgtgttCCTCGTGTGT----TCTGTCCCACTGT-CCTTCCT-GTGTTTGGCCTGTGGCGAGCTCACAGG-CAGAT--GGGCAAGTACTATCACCTGGCTCCTTCTGATCTCCAGCTCCGCCGTGAACTGCATACCCACCTGCCTCTCATCCAAGTCTCCCTACTGCGCACCAGGAGGGGTTAGAGAATGTCAGCTGCTGCCAGGCATGTCCCATGTGCCCAAACAG-GGACAGAGGTGCCTGTGGCCTGGG-TCC-----CCACCAACAGACTGGAAGCACATTACTGTGCTGAGATGTACCTGGAAGAGTCCCAC-----GAAGGGCAGCTGGCTCAAGCTCCCCACCCCAGATGTGGCAACAGGACCCTGGCTCACGT i micMur3.chr1 I 475 I 18 s proCoq1.NW_012133858v1 7406111 566 + 22200726 ----CAatgagctttggagcaagatagatctgggtgtgaattatagt------tgctaactgtttgaccgtgggtaagttattccatattactttcattgcatacaaaatgagaataataatatccactttataaggttggtgcagggtttaaatgatataatgtgtatgaagcatccagcccaggtccagca-tgcaggaggctcaggaagtgT-----------------------------------------------------------------------------------TGCTGTCCTCCTCGTGTGC----TCTGTCCCACTGT-CCTTCCT-GTCGTCAGCCTGCGGCGAGCTCACAGG-CAGAT--GGGCAAGAAGTACCACCTGGCTCCTTCTGCTCTCCAGCTCCACCGTGAACTGCATACCCACTTGCCTCCTATCCAAGTCTCCCTACTGCGCTCCAAGAGGGCCTAAAGAATATCAGCTGCTGCCAGGCATGTCCCATGTGCCAAAACAG-GGACAGTGCTGCCAGTGGCCTGGG-CCC-----CCACCACCAGGCTGGAGCCGCATTACTGTGCTGAGATGTACCTGGAAGAGTCCCAT-----GAAGGTCAGCTGGCCCAAGCCCCCTAGCCCAGATGTGGCAACAGGACCCTGGTTCACGT i proCoq1.NW_012133858v1 I 482 C 0 s otoGar3.GL873829 401758 475 - 608964 ----TAATGACAtttgcagcaagatagatctgggtgtgaattctaat------ttctaactg--tgacctcgggtgagttattc----------------catatagaatgagaatgagaatatctgcttcataaggtttctgcagggtttaaatgg-------------------------------cagta-tgta-gaggctcaggaagtgc-----------------------------------------------------------------------------------TGCTATCCTCCTCGTATGTTCTGTCTGTCCCACTGT-CCTTCCT-------------------------------GAT--G-----GAAATACCACCTGGCTCCCTC---TCTCCAGCTTCGACGTAACCTGCATGCCCACCTGCCTCCCATCCAAGTCTCCTTACTGCGCGTCAGGAGGGTCTAGAGAATATCAGCTGCTGCCAGGCATGTCCCATATGCTGGAAGAG-GGACAGTGCTGGCTG-GGCCTG-------------CCCAATAGGCTGGAGCCACATTACTGTGCTGAGATGTACCTGGCAGAGTCCTAT-----GAAGGGCAGCTGGCTTCAGCTCCCTACCCAGGATGTGGCGACAGGACCCTGGCTCACAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65421138 486 - 98207768 ----caatg-gcccaggagtcaggcagatctgaggttgggttcta----------ttagctgtgtaggtttgattacttcagtccttactacctttacatcctacagaatgaggttcagagcacctgc----------------------------------tgtgAGT-------------------------TTTAAGTGGCCCAGGAAGCAT-----------------------------------------------------------------------------------TG------------TGGAT----GTCCCTCCACTGCCCCTTTCTCGTCCTTGCCGTACGGTGGGCTCCCAGG-CAGAT--AGGCTGGGTACCCCACATG-TTATTTT-GTTTTCCAGCTCCGCCGTGAACTGCACGCCCGCATGCCACTTGTCCACATGTCCTTCCTGAGCATCAGGAGGGGTTGAGGAATGCTAGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACG----GTGATGCC----ACCGAGG-CCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCT---ATGGACTCCAAAGTTTCTCAT-----GAAGGCCAGCTGGCTCGAGAGCCCTCCCCCATACCTGACCACAAGACCTTGGTCCACTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29054925 547 + 31377067 -----------ctctggagccatatggatctgggggtgaattccact------tcctgactctgtgaacttgggtaggttgttccatgttattttcttcctctataaaacgaaggt-acagcacctgcttcctaaggttacagtgaggt-tggacgacataatgtgcgcgaagcac--AGTCCGGGCCCAGGC-T----GGGGCGCGGAGACTGC-----------------------------------------------------------------------------------TGCTGGCCTCCCTGTGCGT----TTGCTCCCACTGTCTCGTCCT-GTTCTCGGCCTGTGGGGAGCTCACGGGCCACATTCGGGCTGGAAGTACCTTCTGCTCCTTTT-GCCCTCCAGCTCTGCCGTGAACTGCATGCCCACCTGCCTCCCACCCGGGTCTCTCTGCTGCATGTCACGAGGGGCTGAGGCACATCAGCCGCAGCCAGGGGTGG-CTGTGGGCCCAAAGGG-G--CAGCGCTGCCGGCGGCCTGGGACCC-----CCACTTCCCGACTGGAGCTACGCTACAG-GCTGC-ATGTACCTGGAAGCTTCCC-C-----GAAGGTCAGCTGCCTAAGG--CCTTGCCCCAGACACTGCAGCGGGACCCTGGCCCACAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878101 564 + 6579706 CAAATGGTgagttttgaagccaaatagatctggctttgaattttagtctctcaccctggctgtgggaactcgggcaagttacttcatattattttcctcttttataagatggagttgataatactggcttcacaaggttgccgtgaggc-tacgtggcataatgtgcatgaagcacccatgccgtgcccagcc-cacagaaggctcaggaagtgC-----------------------------------------------------------------------------------TGCTGCCTTCCTCATACTT----TCCCTCCCACCATCTCTTCCT-GTCCTTGGCCTGTGG-----------------T--GAGCTGGAAGTAGCCCCTGGTTCCTTTTGCCTTCCAGCTTCGCCGTGAACTACATGCCCACATGCTTCCGGTTCAAGTCTCCCTGCTGCGCGTCAGGAGGGGCTAAGGAACGTCGACTGCAGCCAGACGTGACCCATGGGCGTGAAGGA-GGGCAGTGCTGCTTACGGCCTGGG-ACC-----CCACCTGCAGACTTGAGCCACGGTACTGTGCTGGGATGTGCCTGGAAACTTCCTACTTTCAGGCGATCGGCTGCCCCAGACCCCTTACCCCATACTTGGCAGGGGGACCCTGGC-CACAT i dasNov3.JH569502 C 0 C 0 a score=40867.000000 s hg38.chr3_KI270779v1_alt 103896 6 + 205312 CCACCG s panTro5.chr3 200087529 6 + 202621043 CCACCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67110 6 + 190779 CCACCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32003 6 + 106623 CCACCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840135 6 + 123690457 CCACCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440459 6 + 204787373 CCACCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48285 6 + 192460366 CCACCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523876 6 + 19675229 CCACCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459513 6 + 16847902 CCACCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395972 6 - 91754291 CCACCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553294 6 - 1977891 CCACCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432144 6 + 7796314 CCACCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912284 6 - 74750902 ATAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440531 6 + 17725628 GTACTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403601 6 - 6778120 ATACTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57085 6 - 69927 ATACTG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7406677 6 + 22200726 ATGCCT i proCoq1.NW_012133858v1 C 0 I 8 s otoGar3.GL873829 402233 6 - 608964 ATGCCT i otoGar3.GL873829 C 0 I 4 s mm10.chr16 65421624 6 - 98207768 ATGCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29055472 6 + 31377067 ATGCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878665 6 + 6579706 ATGTCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25887391 18 - 114275543 I a score=1636525.000000 s hg38.chr3_KI270779v1_alt 103902 115 + 205312 --GAGTGTATGTGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GTGTGCTTCCA s panTro5.chr3 200087535 115 + 202621043 --GAGTGTATGTGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GTGTGCTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67116 115 + 190779 --GAGTGTGTGTGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GTGTGCTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32009 115 + 106623 --GAGCGTATGTGT---GGGAA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GTGTGCTTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840141 115 + 123690457 --GAGTATATGTGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATATTCTGTGTTTCAGTAAAGAGAGACCTGCTCAC------CCATCT----------GTGTGCTTCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440465 113 + 204787373 --GAGCATATATGC---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCT----------GTGTGCTTCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48291 113 + 192460366 --GAGCATATATGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCT----------GTGTGCTTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523882 113 + 19675229 --GAGCATATATGC---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCT----------GCGTGCTTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459519 113 + 16847902 --GAGCGTGTATGC---GGGGA--GGGGCTTCACCTGTTCCCTGAGGGGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCT----------GTGTGCTTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 395978 113 - 91754291 --GAGCATATATGC---AGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCT----------GTGTGCTTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553300 113 - 1977891 --GAGCATATATGC---GGGGA--GGGGCTTCACCTGTTCCCAGAGGGGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCT----------GTGTGCTTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432150 115 + 7796314 --GAGCATATATGT---GGGGA--GGGACTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTGAAGAGAGAGCTGATCAG------CCATCT----------GTGTGCTTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912290 116 - 74750902 --GAGTATATGTGT---GGGGAGGGGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GCGTGCTTCC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440537 94 + 17725628 --GAGTATATGTGT---GGGGA-GGGGGCTTCACCTGTTCCCAGAG-------------------GGAACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCACCT------------GTGCTTCC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403607 117 - 6778120 --GAGTACATGTGT---CGGGAGGGGGGCTTCGCCTGTTCCCACAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GTGTGCTTCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57091 116 - 69927 --GAGTGTATGTGT---GGGGA-GGGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCT----------GTGTGCTTCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25887409 113 - 114275543 --gtgtgtgtgtgG---GGGAG--GGGGCTTCCTCTGTTCCCAGACATGTCCTT-GACTT-CCTTGGCACATGTGCTGTGTTTCAGTAAAGAGAGACCTGACCAC------CCACCT----------GTGTGTTTCCA i micMur3.chr1 I 18 I 8 s proCoq1.NW_012133858v1 7406691 109 + 22200726 --GTATGTGGGTG--------G--GGGGCTTCTCCTGTTCCCAGACATGTCCTTGGACTT-CCTTGGCACACATGCTGTGTTTCAGTAAAAAGAGACCTGACCAC------CCACCT----------GTGTGTTTCCA i proCoq1.NW_012133858v1 I 8 C 0 s otoGar3.GL873829 402243 114 - 608964 --GAGTGTGTGTGA---GGAGG--GGGTCTTCCCCTGTTCCCAAAAATGTCCTTGGACTT-CCTTGACACATGGGCTGTCTTTCAGTAAAGACAGCCCCAACCAC------CCATCT----------GTGTGCTCCCA i otoGar3.GL873829 I 4 I 1 s mm10.chr16 65421630 114 - 98207768 --GAGTGTATGTGC-AAGGGGA--GGGGCTG-ACCTCTTTTCAGAGATGTCCCTCACAT--CCTCTGCCTGGTTATTGTATTTCGGTAAAGGGAGACCTGATCAC------TCACCT----------GTGCTCTTCTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29055478 122 + 31377067 ---GGTGTGTGTGTTGGGTGGG--GGGGCTTCCCTTGTT-CCAAAGATGCCCTTGGACTCCCTCTGGCACATGTGTCATGTTGCAGTAAAGAGTGATCTGATCACCTGTCACCCTCG----------TTGTGCTTCTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878671 114 + 6579706 GAGTGTGTGTGTGT---GAGCA--TGGGC--CCCCTGCTCCCAGAGGTGTCCTTGGACTTCTCTTGGCCCATTT-----------GTAAAGGAGGACCTGATCAC------CCATCTGTCATCTGCTGTGTGCTCCCG i dasNov3.JH569502 C 0 C 0 a score=92082.000000 s hg38.chr3_KI270779v1_alt 104017 8 + 205312 TCCTGCAT s panTro5.chr3 200087650 8 + 202621043 TCCTGCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67231 8 + 190779 TCCTGCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32124 8 + 106623 TCCTGCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840256 8 + 123690457 TCCTGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440578 8 + 204787373 TCCTGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48404 8 + 192460366 TCCTGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 523995 8 + 19675229 TCCTGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459632 8 + 16847902 TCCTGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396091 8 - 91754291 TCCTGCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553413 8 - 1977891 TCCTGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432265 8 + 7796314 TCCTGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912406 5 - 74750902 ---TGCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440631 3 + 17725628 -----ACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403724 8 - 6778120 TCCTGCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57207 8 - 69927 TCCTGCCT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7406800 8 + 22200726 CCTTGCAT i proCoq1.NW_012133858v1 C 0 I 618 s otoGar3.GL873829 402358 8 - 608964 CCTTGCAT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65421744 8 - 98207768 TTTTGTAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29055600 8 + 31377067 TCGGACAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878785 8 + 6579706 TCCTGTAT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25887522 8 - 114275543 I a score=72124.000000 s hg38.chr3_KI270779v1_alt 104025 9 + 205312 TAAAATTCA- s panTro5.chr3 200087658 9 + 202621043 TAAAATTCA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67239 9 + 190779 TAAAATTCA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32132 9 + 106623 TAAAATTCA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840264 9 + 123690457 TAAAATTCA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440586 9 + 204787373 TAAAACTCA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48412 9 + 192460366 TAAAATTCA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524003 9 + 19675229 TAAAATTCA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459640 9 + 16847902 TAAAACTCA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396099 9 - 91754291 TAAAATTCA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553421 9 - 1977891 TAAAACTCA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432273 9 + 7796314 TAAAACTCA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912411 9 - 74750902 TAACCTTCA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440634 9 + 17725628 TAAACTTCA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403732 9 - 6778120 TAAACTTCA- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57215 9 - 69927 TAAACGTCA- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 402366 1 - 608964 -------C-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65421752 3 - 98207768 ------TCA- i mm10.chr16 C 0 I 6 s canFam3.chr33 29055608 9 + 31377067 TAGAATTCT- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3878793 10 + 6579706 TAAAATTATT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887522 8 - 114275543 I a score=330539.000000 s hg38.chr3_KI270779v1_alt 104034 24 + 205312 CTCAGTGTGGCC-CAGAGGCTGTCT s panTro5.chr3 200087667 24 + 202621043 TTCAGTGTGGCC-CAGAGGCTGTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67248 24 + 190779 TTCAGTGTGGCC-CAGAGGCTGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32141 24 + 106623 CTCAGTGTGGCC-CAGAGGCTGTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840273 20 + 123690457 CTCGGTGTGGCC-CAGAGG----CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440595 24 + 204787373 CTCAGCGTGGTC-CAGAGGTTGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48421 24 + 192460366 CTCAGCGTGGTC-CAGAGGTTGTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524012 24 + 19675229 CTCAGCGTGGTC-CAGAGGTTGTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459649 24 + 16847902 CTCAGCGTGGTC-CAGAGGTTGTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396108 24 - 91754291 CTCAGCGTGGTC-CAGAGGTTGTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553430 24 - 1977891 CTCAGCGTGGTC-CAGAGGTTGTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432282 24 + 7796314 CTCGGTGTGGTC-CAGAGGCTGTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912420 21 - 74750902 CTCAGTATGACC-CA---GCTGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440643 24 + 17725628 CTCAGTATGGCC-CAGAGGCTGTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403741 24 - 6778120 CTCAGTATGGCC-CAGAGGCTGTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57224 23 - 69927 CTTGGCGTGGCC-CA-GGGCTGTCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25887530 24 - 114275543 CTCAGTGTGGCC-CAGAGGCTGTCT i micMur3.chr1 I 8 I 2729 s otoGar3.GL873829 402367 24 - 608964 CTCAGTGTGGCC-CACAGGGTGTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65421761 25 - 98207768 CTCAGTATAACCTCAGAGATTATCT i mm10.chr16 I 6 I 2 s canFam3.chr33 29055618 24 + 31377067 CACGGTGTGGCC-CAGAGGTTATCT i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3878803 24 + 6579706 TTCAGTGTGGCC-AAGAGGTTTTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I a score=205166.000000 s hg38.chr3_KI270779v1_alt 104058 22 + 205312 -ATTGAT-CTG---CATG-----------------CTTTCGCCA s panTro5.chr3 200087691 22 + 202621043 -ATTGAT-CTG---CATG-----------------CTTTCGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67272 22 + 190779 -ATTGAT-CTG---CATG-----------------CTTTCGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32165 22 + 106623 -ATTGAT-CTG---CATG-----------------CTTTCGCCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840293 22 + 123690457 -ACTGAT-CTG---CATG-----------------CTTTCGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440619 22 + 204787373 -GTTGAT-CTG---TATG-----------------CTTTCGCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48445 22 + 192460366 -ATTGAT-CTG---TATG-----------------CTTTCGCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524036 22 + 19675229 -ATTGAT-CTG---TATG-----------------CTTTCGCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459673 22 + 16847902 -ATTGAT-CTG---TATG-----------------CTTTCGCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396132 22 - 91754291 -ATTGAT-CTG---TATG-----------------CTTTCGCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553454 22 - 1977891 -ATTGAT-CTG---TATG-----------------CTTTCGCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432306 22 + 7796314 -GTTGAT-CTG---TATG-----------------CTTTCGCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912441 22 - 74750902 -GTTGAC-TTG---TGTG-----------------CTCTCGCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440667 22 + 17725628 -GTTGAG-CTG---TGTG-----------------CTCTCGCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403765 22 - 6778120 -ATTGAG-CTG---TGTG-----------------CTCTCACCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57247 22 - 69927 -ACTGAC-CTG---TACG-----------------CTCTTGCCA i aotNan1.NW_018503669v1 C 0 I 41 s otoGar3.GL873829 402391 25 - 608964 -ATTTAC-CTGTATTATG-----------------CTTTCAACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65421788 23 - 98207768 -AGGGATCCCA---GGTG-----------------CCTTAGATG i mm10.chr16 I 2 C 0 s canFam3.chr33 29055643 39 + 31377067 -TTTGAG-CCA---TATAGGTTGTTTGGTTAAGGTTTTTTTACG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3878827 24 + 6579706 ATTTGAC-CTG---TATA----------------TTTTTTGACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I a score=335575.000000 s hg38.chr3_KI270779v1_alt 104080 43 + 205312 TTTTTATAGTACAGGGATT--GTGTATAGTCTCACTGCTA---CCTCC s panTro5.chr3 200087713 43 + 202621043 TTTTTATAGTACAGGGATT--GTGTGTAGTCTCACTGCTA---CCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67294 43 + 190779 TTTTTATAGTACAGGGATT--GTGTGCAGTCTCACTGCTA---CCTcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32187 46 + 106623 TTTTTATAGTACAGGGATT--GTGTATAGTctcactgctacctcctcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840315 42 + 123690457 TTTTTACAGTACAGGGA-T--GTGTATAGTCTCACTGCTA---CCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440641 42 + 204787373 TTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-A---cctcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48467 42 + 192460366 TTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-A---cctcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524058 42 + 19675229 TTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-A---CCTcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459695 42 + 16847902 TTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-A---CCTcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396154 42 - 91754291 TTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-A---CCTcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553476 42 - 1977891 TTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-A---CCTcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432328 42 + 7796314 TTTTCACGGGAGAGGGATT--GTGGATATTCTCACTGC-A---CCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912463 43 - 74750902 TCTTTACAGTCTAGGGGTT--GTGAATGTGCTCATGGCTC---CCTCC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 440689 43 + 17725628 TCTTTGCAGTCTAGGGGCC--GTGTATGTGCCCACGGCTC---CCTCC i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 403787 42 - 6778120 T-TTTGCAGTCTAGGGGCT--GTGTATGTGCTCACggctc---cctcc i cebCap1.NW_016107444v1 C 0 I 1 s otoGar3.GL873829 402416 38 - 608964 TTTCTAT-----AGGGATT--TTGTGTATCCACAAGGCTA---CCACC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65421811 42 - 98207768 TTTTTACTACGTGGGAATTTGGGGAGTGATTTC-CTGTTG---CCT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29055682 43 + 31377067 TTTTTATGATACAGGGATT--TTGTGCATCCTCCCTACAA---CCgcc i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3878851 43 + 6579706 TTTTTACGATATAGGGATT--TTGTGCATCCTCACTGCTA---CCTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e aotNan1.NW_018503669v1 57269 41 - 69927 I a score=881149.000000 s hg38.chr3_KI270779v1_alt 104123 75 + 205312 -TCCTTCTACTCCCCCAGGTCTTGGTTTGGACTTTGATGATAGCATTTACTGAGACGGG-CCT-GGAGCCTGTCGAAC s panTro5.chr3 200087756 75 + 202621043 -TCCTTCTACTCCCCCAGGTCTTGGTTTGGACTTTGATGATAGCATTTACTGAGACGGG-CCT-GGAGcctgttgaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67337 75 + 190779 -tcctcctactcccccaggtcttggtttggactttgatgatagcatttactgagacggg-cct-ggagcctgttgaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32233 75 + 106623 -tcctcctactcccccAGGTCTTGGTTTGGACTTTGATGATAGCATTTACTGAGACGGG-CCT-GGAGcctgttgaac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840357 75 + 123690457 -TCCTCCTACTCCCCCAGGTCTTGGTTAGGACTTTGATGATAGCATTTACTGGGATGGG-CCT-GGAGcctgttgaac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440683 75 + 204787373 -tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cct-ggagcctgttgaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48509 75 + 192460366 -tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cct-ggagcctgttgaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524100 75 + 19675229 -tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cct-ggagcctgttgaac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459737 75 + 16847902 -tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cct-ggagcctgttgaac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396196 75 - 91754291 -tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cct-ggagcctgttgaac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553518 75 - 1977891 -tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagaccgg-cct-ggagcctgttgaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432370 75 + 7796314 -TCCTTCCACTCCCCCAGGTCTGGGTTTGCACTTTGATGAGAGCATTTACTGAGACGGG-CCT-GGAGcctgttggac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912507 74 - 74750902 -TCCTTCCAATGCCCCAGGTCTTGCTTTGGACTTTGATTA-AGCATTTAGTGAGACTGG-CCT-GGAGCCAGTGGAAC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 440733 74 + 17725628 -TCCGTCCACTGCCCCAGGTCTTGCTCTGGACTTTGATTA-AGCATTTACTGAGACTGG-CCT-GCAGCCGGTGGGAT i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 403830 74 - 6778120 -tccgtccactgccccaggtcttgctttggactttgatta-agcatttactgagactgg-cct-gcagccggtggagc i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018503669v1 57310 74 - 69927 -TCCTTCCACTGCCCCGGGTCTCGCTTTGCACTTCGATTA-AGCATTTACTGAGACTGG-CCT-GGAGCCGGTGGAAC i aotNan1.NW_018503669v1 I 41 C 0 s otoGar3.GL873829 402455 76 - 608964 -TCCTTCTCACTCCCCTGTTCTTGGTTTGGACCTTGGTGATGGCCCCCACTGAGGCCGG-CCTCAGAGCGTGTTGAAC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65421853 48 - 98207768 ------------------GATTTGGTTTGACATT-----------TTTACCAAGACTTGCCCT-GGAGCCTGTTGAAC i mm10.chr16 C 0 I 961 s canFam3.chr33 29055726 76 + 31377067 -tcctcattctcccctggttcttggtttggaccttgattatggcacttacggaggctggccct-ggagtctgttgaac i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3878894 77 + 6579706 CTACTTCATGCTCTCCCAGTTTTGGTTTGGACCTTGATTACAGCACTGACTGAGGTTGG-CCTTGGGGcctgttgaac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I a score=1989741.000000 s hg38.chr3_KI270779v1_alt 104198 216 + 205312 AGCCCGCTGCAGCagggcagggaccacctttgttcatctcagtatcccctgaa-ctagcagagtgtctggcctgcagtgggatcgcagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCCTCT--TATATGTTATAACTTACATGCTATTATTTTTTTAAAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA s panTro5.chr3 200087831 216 + 202621043 agcccgctgcggcagggcagggaccacctttgttcatctcagtatcccctgaa-ctagcagagtgtctggcctgcggtgggatcgcagagaa----tgtggaattgacctaaATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAGTTATTCCTCT--TATACGTTATAACTTACATGCTATTATTTTTTTAAAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67412 214 + 190779 agcccgctgcggcagggcagggaccacctttgttcatctcagtatcccctgaa-ctagcagagtgtctggcctgcggtgggatcgcagagaa----tgtggaattgacctaaATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAGTTATTCCTCT--TATATGTTATAACTTACATGCTATTATTTTTT--AAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32308 215 + 106623 agcccgctgcggcagggcagggaccacctttgttcatctcagtatcccctgaa-ctagcagagtgtctggcctgcggtgggatcgcagagaa----tgtGGAATTGGCCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CT-AATTATTCCTCT--TGTATGTTATAACTTACATGCTATTATTTTTTAAAAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840432 216 + 123690457 aatgcactgtggcagggcaggaaccacctttgttcatctcaatatcccctgaa-ctagcagagcgtctggcctgcggtgggattgcagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCCTCT--TATATGTTATAACTTACATGCTATTATTTTTTTAAAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440758 213 + 204787373 agggcgctgtggcagggcaggggccacctttgttcatctcagtatctcctgaa-ctagcagagcgtctggcctgcggtgggatcacagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTAttattct--tatatgttataacttacatgctatta-ttttttaAAAAATTAA-----TATGGTT-TA---------CTTTTTATTAT------A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48584 215 + 192460366 agggcgctatggcagggcaggggccacctttgttcatctcagtatctcctgaa-ctagcagagcgtctggcctgcggtgggatcacagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA-TTTTTTAAAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524175 215 + 19675229 agtgcgctatggcagggcaggggccacctttgttcatctcagtatctcctgaa-ctagcagagcgtctggcctgcagtgggatcacagagaa----tgtggaattgacctaaATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA-TTTTTTAAAAAATTAA-----TATGGTT-TA---------CTTTTTATTATA----AA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 459812 210 + 16847902 agggcgctacggcagggcaggggccacctttgttcatctcagtatcccctgaa-ctagcagagcgtctggcctgtggtgggatcacagagaa----tgtGGAATCGACCTAAATTTAAATGTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA--TTTTTAAAAAATTAA-----TATGGT--------------TTTTTATTAGA----AA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396271 210 - 91754291 agtgcgctacggcagggcaggggccacctttgttcatctcagtatcccctgaa-ccggcagagcgtctggcctgcagtgggatcacagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA--TTTTTAAAAAATTAA-----TATGGT--------------TTTTTATTAGA----AA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553593 210 - 1977891 agtgcgctatggcagggcaggggccacctttgttcatctcagtatcccctgaa-ctagcagagcgtctggcctgcggtgggatcacagagaa----tgtGGAATCGACCTAAATTTAAATGTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA--TTTTTAAAAAATTAA-----TATGGT--------------TTTTTATTAGA----AA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432445 210 + 7796314 agtgcgctacggcagggcacgggccacctttgtccatctcagtatcccccgaa-ctagcagagcgtctggcctgcggtgggatcgcagagaa----tgtGGAATGGACCTAAATTTAAATTTCAAGTTCTGGACGCAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA-TTTTTTTAAAAATTAA------ATGGT--------------TTTTTATTTTA----AA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912581 228 - 74750902 AGTGAGTGACAGCAGGGCAGAGGCCACCTCTGTTCACCTCAGTATCCCTTGAG-CTGGCAGGGCATCGAGCCTGTGGTAAGGACGCAGAGAC----TGTGGAATTGACCTGAATT------TCAAGTTCTGGACACAAGCAGATTCAAAAGAAAGTCTGCGATACTTGATTATTCCTCT--CATGTCTTATAACGTACGTGTTACTA--TGTTTTAAAATTAAA-----TGTGGTT-TA---------CTTTTTATTA-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 440807 232 + 17725628 GGTGAGTGACAGGAGGGCAGAGGCCACCTCTGTTCATCTCAGTGTCCCCTGAG-CTAGCAGGGCATCGAGGCTGTGGTGAGGATGCAGAGAA----TGTGGAATTGACCTGAATT------TCAAGTTCTGGACACAAGCAGATTTAAAAGAAAGTCTACAATACTCAATTATTCCTCG--CATGTCTTATAACTTACATGTTATTA--TGTTTTAAAATTAAA-----TGTGTTT-TA---------CTTTTTATTATA----AA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 403904 231 - 6778120 cgtgagcgacagcagggcagaggccacctctgttcatctcagtgtcccctgag-ctagcagggcattgagcctgtggtaaggacgcagagaa----tgtGGAATTGACCAGAATT------TCAAGTTCTGGACACAGGCAGATTTAAAAGAAAGTCTGCAATACTTGATTATTCCTCT--CATATCTTATAAC-TACATATTATTA--TGTTTTAAAATTAAA-----TGTGGTT-TA---------CTTTTTATTATA----AA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57384 232 - 69927 AGTGAGCGACAGCAGGGCCGAGGCCACCTCTGTTCATCTCAGTATCCCCTGAG-CTAGCAGGGCATCGAGCCTGTGGTAAGGACGCAGAGAA----TGTGGAATTGACCTGAATT------TCAAGGTCTGGACACAAGCAGATTGAAAAGAAAGTCCGCAATATTTGATTATTCCTCT--CATATCTTATAACTTACATGTTGTTA--TGTTTTAAAATTAAA-----TGTGGTT-TA---------CTTTTTATTATA----AA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 402531 234 - 608964 ACtgagctccttccaggcagg-----cccgtgt---tctccgtatcctcagag-cctaccgagcacgtgg-ctgaggttggatcacacagaatgtttgttgaatTGACTTGCATT------TCACGCTCTGGATGTAAGCAGATTTCAAAGAAACTCTGCCATTCTCAATGATTCCTTC--CTTAACTCTTAACTCACCTGTTATTATTGTTTTAATTAAACAAGGCTTTGTTGGT-TT---------TTTTCTATTGTA----AA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29055802 237 + 31377067 tttgagctccttcagagcagggaccatattt-----tctcagtatcctttgaacctagcagagcgcctggcctgtggtaggatcacagagaatgcctgttggattgacttgaatT------TCAAGTTCTGGACATAAGC-AGATCACAGGAAAGTCTGCAGTACTCAATTATTCCTCTCCTCTAGCTCGTAAGT--CGAGttatta-ttattattattattat-----tattattatt---------attattattatATTTTAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3878971 224 + 6579706 tgtgagctccttcagggcagcaaccagacttcttcgtcttaggatcccctgaacccagcagggtgcccagcCT-----------------------GGTGGAATTGACTTGAATT------TCAAAATCTGGCCACAAGCAGATTTAAAAGAAAGCCTACAGTACTCAACCCTTCCTCC--CACAGTTTACAGCTCTCACGTTACTG-TTTCATTAAAATGAAA-----CATGGTT-TATTGGttttttttcctactgta----aa i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e mm10.chr16 65421901 961 - 98207768 I a score=134252.000000 s hg38.chr3_KI270779v1_alt 104414 11 + 205312 AGTAAAACTTg s panTro5.chr3 200088047 11 + 202621043 AGTAAAACTTg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67626 11 + 190779 AGTAAAACTTg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32523 11 + 106623 AGTAAAACTTg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840648 11 + 123690457 AGTAAAACTTg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440971 11 + 204787373 ATTAAAACTTg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48799 11 + 192460366 AGTAAAACTTg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524390 11 + 19675229 AGTAAAACTTg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460022 11 + 16847902 AGTAAAACTTg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396481 11 - 91754291 AGTAAAACTTg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553803 11 - 1977891 AGTAAAACTTg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432655 11 + 7796314 AGTAAAACTTg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912809 9 - 74750902 --TAAAACTTg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441039 11 + 17725628 AGTAAAACTTg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404135 11 - 6778120 AGTAAAACTTg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57616 11 - 69927 AGTGAAACTTg i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29056039 11 + 31377067 AATTAAATGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3879195 11 + 6579706 agtaaagcttg i dasNov3.JH569502 C 0 I 1448 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I a score=161007.000000 s hg38.chr3_KI270779v1_alt 104425 18 + 205312 gcca---ggctc---agtggctca s panTro5.chr3 200088058 18 + 202621043 acca---ggctc---agtggctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67637 18 + 190779 acca---ggctc---agtggctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32534 18 + 106623 gcca---gtctc---agtggctca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840659 18 + 123690457 gccg---ggcac---agtggctca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202440982 18 + 204787373 gtca---ggcac---actggctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 48810 18 + 192460366 gtca---ggcac---actggctca i macFas5.chr2 C 0 I 319 s macNem1.NW_012014355v1 524401 18 + 19675229 gtca---ggcac---actggctca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460033 18 + 16847902 gcca---ggcac---actggctca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396492 18 - 91754291 gcca---ggcac---actggctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 553814 18 - 1977891 gcca---ggcac---actggctca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 432666 18 + 7796314 gcca---ggcac---actggctca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912818 18 - 74750902 gcca---ggtgc---agtggctca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441050 18 + 17725628 gcca---ggtgc---agtggctcg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404146 18 - 6778120 gcca---ggtgc---agtggctca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57627 18 - 69927 gcca---ggtac---agtggctca i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29056050 24 + 31377067 GTTATggggctcctgggtggctca i canFam3.chr33 C 0 I 202 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I a score=5118.000000 s hg38.chr3_KI270779v1_alt 104443 1 + 205312 c s panTro5.chr3 200088076 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67655 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32552 1 + 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840677 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441000 1 + 204787373 t i rheMac8.chr2 C 0 I 319 s macFas5.chr2 49147 1 + 192460366 t i macFas5.chr2 I 319 C 0 s macNem1.NW_012014355v1 524419 1 + 19675229 t i macNem1.NW_012014355v1 C 0 I 319 s cerAty1.NW_012004056v1 460051 1 + 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396510 1 - 91754291 t i chlSab2.chr15 C 0 I 319 s manLeu1.NW_012102020v1 553832 1 - 1977891 t i manLeu1.NW_012102020v1 C 0 I 319 s colAng1.NW_012118932v1 432684 1 + 7796314 t i colAng1.NW_012118932v1 C 0 I 319 s calJac3.chr17 912836 1 - 74750902 t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441068 1 + 17725628 t i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404164 1 - 6778120 t i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57645 1 - 69927 t i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056074 202 + 31377067 I a score=55845.000000 s hg38.chr3_KI270779v1_alt 104444 5 + 205312 gcctg s panTro5.chr3 200088077 5 + 202621043 gccgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67656 5 + 190779 gcctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32553 5 + 106623 gcctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840678 5 + 123690457 gcctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441320 5 + 204787373 gcctg i rheMac8.chr2 I 319 C 0 s macFas5.chr2 49148 5 + 192460366 gcctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524739 5 + 19675229 gcctg i macNem1.NW_012014355v1 I 319 C 0 s cerAty1.NW_012004056v1 460052 5 + 16847902 gcctg i cerAty1.NW_012004056v1 C 0 I 421 s chlSab2.chr15 396830 5 - 91754291 gcctg i chlSab2.chr15 I 319 C 0 s manLeu1.NW_012102020v1 554152 5 - 1977891 gcctg i manLeu1.NW_012102020v1 I 319 C 0 s colAng1.NW_012118932v1 433004 5 + 7796314 gcctg i colAng1.NW_012118932v1 I 319 C 0 s calJac3.chr17 912837 5 - 74750902 gcctg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441069 5 + 17725628 gcctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404165 5 - 6778120 gcctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57646 5 - 69927 gcctg i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056074 202 + 31377067 I a score=876287.000000 s hg38.chr3_KI270779v1_alt 104449 97 + 205312 taatcccagcactttgggaggccgaggccggtggatcac--gagg----tcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaa-a s panTro5.chr3 200088082 97 + 202621043 taatcccagcactttgggaggccgaggccggtggatcac--gagg----tcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaa-a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67661 97 + 190779 taatcccagcactttgggaggccgaggccggtggatcac--gagg----tcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaa-a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32558 96 + 106623 taatcccagcactttgggaggcc-aggccggtggatcac--gagg----tcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaa-a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840683 97 + 123690457 taataccagcactttgggaggccgaggccggtggatcat--gagg----tcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaa-a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441325 97 + 204787373 taatcccagcactttgggaggccgaggcaggcggatcac--gagg----tcaggagtttgagaccaacctggccagcatggtgaaactctgtctctacaaaa-a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49153 97 + 192460366 taatcccagcactttgggaggccgaggcaggcggatcac--gagg----tcaggagtttgagaccaacctggccagcatggtgaaactctgtctctacaaaa-a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524744 97 + 19675229 taatcccagcactttgggaggccgaggcaggcggatcac--gagg----tcaggagtttgagaccaacctggccagcatggtgaaactctgtctctacaaaa-a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460478 97 + 16847902 taatcccagcactttgggaggccgaggcaggcggatcac--gagg----tcaggagtttgagaccagcctggccagcatggtgaaaccccgtctctacaaaa-a i cerAty1.NW_012004056v1 I 421 C 0 s chlSab2.chr15 396835 97 - 91754291 taatcccagcactttgggaggccgaggcaggcagatcac--gagg----tcaggagtttgagaccagcctggccagcatggtgaaaccctgtctctacaaaa-a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554157 97 - 1977891 taatcccagcactttgggaggccgaggcaggcagatcac--gagg----tcaggagtttgagaccagcctggccagcatggtgaaaccccgtctctacaaaa-a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433009 97 + 7796314 taatcccagcactttgggaggccgaggcaggcggatcac--gagg----tcaggagtttgagaccagcctggccagcatggtgaaaccctgtctctacaaaa-a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912842 98 - 74750902 taatcccaggactttggaaggctgagctgggcggatcgcttgagc----tcaggagtctgagactggcctgggtaacatggtgaaactctgtctctacaaaa-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441074 98 + 17725628 tcatcccagcactttggaaggctgaggtgtggggatcgcttgagc----tcaggagtctgagactggcctgggtaacatggtgaaactccgtctctacaaaa-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404170 103 - 6778120 taatcccagcgctttggaaggctgaggtgggtggattgcttgagctcagtcaggagtctgagactggcctgggtaacgtggtgaaactccgcctctacaaaaa- i cebCap1.NW_016107444v1 C 0 I 170 s aotNan1.NW_018503669v1 57651 98 - 69927 taatcccagcactttggaaggctgaggtgagtggatcgcttgagc----tcaggagtctgagactggcctgggtaacatggtgaaactccatctctacaaaa-- i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056074 202 + 31377067 I a score=209181.000000 s hg38.chr3_KI270779v1_alt 104546 26 + 205312 acacgaaaattagctgggtgtggtgg s panTro5.chr3 200088179 26 + 202621043 acacgaaaattagctgggtgtggtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67758 26 + 190779 acacgaaaattagctgggtgtggtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32654 26 + 106623 acacgaaaattagctgggtgtggtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840780 26 + 123690457 acacaaaaattagctgggcgtggtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441422 26 + 204787373 acacagaaattagctgggtgtcgtgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49250 26 + 192460366 acacagaaattagctgggtgtcgtgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524841 26 + 19675229 acacagaaattagctgggtgtcgtgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460575 26 + 16847902 acacagaaattagctgggtgtggtgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396932 26 - 91754291 acacagaaattagctgggtgtggtgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554254 26 - 1977891 acacagacattagctgggtgtggtgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433106 26 + 7796314 acacagaaattagctgggcgtggtgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912940 26 - 74750902 atacacaaattagctaggtgtaatgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441172 26 + 17725628 atacacaaattagcgggctgtaatgg i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 57749 26 - 69927 atacacaaattagctgggtgtagtgg i aotNan1.NW_018503669v1 C 0 I 142 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056074 202 + 31377067 I e cebCap1.NW_016107444v1 404273 170 - 6778120 I a score=921526.000000 s hg38.chr3_KI270779v1_alt 104572 149 + 205312 caggtgcctgtaatc-ccagctacccaggaggctgagacgggagaatcacttgaacccgggaggcagaggttgcagtgacccaagatcctaccactgcaccccagcctgggcaaaagggcaagactctgtctc----------------ataaataaataaattta s panTro5.chr3 200088205 149 + 202621043 caggtgcctgtaatc-ccagctacccaggaggctgagacgggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcctgccactgcaccccagcctgggcaaaagggcaagactctgtctc----------------ataaataaataaattta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67784 149 + 190779 caggtgcctgtaatc-ccagctacccaggaggctgagacgggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcctgccactgcaccccagcctgggcaaaagggcaagactctgtctc----------------ataaataaataaattta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32680 149 + 106623 caggtgcctgtaatc-ccagctacccaggaggctgagacgggagaatcacttgaacccgggaggcagaggttgcagtgacccaagatcctaccactgcaccccagcctgggcaaaagggcaagactctgtctc----------------ataaataaataaattta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840806 148 + 123690457 caggtgcctgtaatc-ccagctaccagggagtctgaggcgggagaatcgcttgaacccgggaggcggaggttgcagtg-cccaagatcccgaaactgccctccagcctgggcgaaagggcaagaccctgtctc----------------ataaataaataaactta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441448 165 + 204787373 caggggcctgtaatc-ctagctactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaggatcccgccgctgcactccagcctgggtgaaagggcaagactctgtctcataaataaataaatagataaataaataaattta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49276 165 + 192460366 caggggcctgtaatc-ctagctactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaggatcccgccgctgcactccagcctgggtgaaagggcaagactctgtctcataaataaataaatagataaataaataaattta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 524867 165 + 19675229 caggggcctgtaatc-ctagctactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaggatcccgccgctgcactccagcctgggtgaaagggcaagactctgtctcataaataaataaatagataaataaataaattta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460601 161 + 16847902 caggtgcctgtaatc-ctagctactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaagatcccgccgctacactccagcctgggtgaaagggcaagactctgtctc----ataaataaatatataaataaataaaTTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 396958 161 - 91754291 caggtgcctgtaatc-ctagctacttgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaagatcccactgctacactccagcctgggtgaaagggcaagactctgtctcataaataaatat----ataaataaataaaTTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554280 165 - 1977891 caggtgcctgtaatc-ctagctactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaagatcccgccgctacactccagcctgggtgaaagggcaagactctgtctcataaataaatatataaataaataaataaattta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433132 153 + 7796314 caggtgcctgtaatcgttaactactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgcagtgacccaagatcctgccgctgcactccagcct-ggtgaaagggcaagactctgtctcataa------------ataaataaataaattta i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 912966 141 - 74750902 cgcacacctgt-atc-ccaggtactctcgcgactgaggtgggaggatcacttgaacccgggagatggagattgcagtcagctgagatcacgcctctgcactcc------ggtgacaaggtgagaccc-----------------aaaaaataaatgaataaagata i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 441198 140 + 17725628 tgcacacctgt-atc-ccaggtgctct-gcgactgaggcgggaggatcacttgaacccgggagatggagattgcagtcagctgagatcacgcctctgcactct------ggtgacaaggtgagaccc-----------------aaaaaataaatgaataaagatg i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056074 202 + 31377067 I e aotNan1.NW_018503669v1 57775 142 - 69927 I e cebCap1.NW_016107444v1 404273 170 - 6778120 I a score=101190.000000 s hg38.chr3_KI270779v1_alt 104721 10 + 205312 aaataaaagt s panTro5.chr3 200088354 10 + 202621043 aaataaaagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67933 10 + 190779 aaataaaagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32829 10 + 106623 aaataaaagt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840954 10 + 123690457 aaataaaagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441613 10 + 204787373 aaataaaagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49441 10 + 192460366 aaataaaagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525032 10 + 19675229 aaataaaagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460762 10 + 16847902 AAATAAAAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397119 10 - 91754291 AAATAAAAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554445 10 - 1977891 aaataaaagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433285 10 + 7796314 aaataaaaGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 913112 10 - 74750902 aaaTAAAAGC i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 441338 6 + 17725628 ----aaaaGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404443 10 - 6778120 aaaTAAAAGT i cebCap1.NW_016107444v1 I 170 C 0 s aotNan1.NW_018503669v1 57917 10 - 69927 aaaTAAAAGT i aotNan1.NW_018503669v1 I 142 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056074 202 + 31377067 I a score=37128.000000 s hg38.chr3_KI270779v1_alt 104731 3 + 205312 aaa s panTro5.chr3 200088364 3 + 202621043 aaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67943 3 + 190779 aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32839 3 + 106623 aaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840964 3 + 123690457 aaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441623 3 + 204787373 aaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49451 3 + 192460366 aaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525042 3 + 19675229 aaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460772 3 + 16847902 AAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397129 3 - 91754291 AAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554455 3 - 1977891 aaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433295 3 + 7796314 AAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 913122 3 - 74750902 AAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441344 3 + 17725628 AAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404453 3 - 6778120 AAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57927 3 - 69927 AAA i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29056276 3 + 31377067 AAA i canFam3.chr33 I 202 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402765 0 - 608964 C e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I a score=914131.000000 s hg38.chr3_KI270779v1_alt 104734 77 + 205312 aCTTGTTTATGATTTC-AAAATTTTGAAATATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAA s panTro5.chr3 200088367 77 + 202621043 aCTTGTTTATGATTTC-AAAATTTTGAAATATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 67946 77 + 190779 aCTTGTTTATGATTTC-AAAATTTTGAAATATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32842 77 + 106623 aCTTGTTTATGATTTC-AAAATTTTGAAATATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120840967 77 + 123690457 aCTTGTTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441626 77 + 204787373 aCTTGTTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49454 77 + 192460366 aCTTGTTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525045 77 + 19675229 aCTTGTTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460775 77 + 16847902 ACTTGTTTATGATTTC-AAAATTTTGAAAAATTT-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397132 77 - 91754291 ACTTGTTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACT-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554458 77 - 1977891 aCTTGTTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433298 77 + 7796314 ACTTGCTTATGATTTC-AAAATTTTGAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTGGGAAGAGGA--GAAAGAAAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 913125 77 - 74750902 ACTTGCTTATGATTTC-AAAATTTTTAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTAGGAAGAAGA--GAAAGAAAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441347 77 + 17725628 ACTTGCTTATGATTTC-AAAATTTAAAAAAATTT-CAAAGACC-----------AAGCAAAGTAAGAAGTAGGAAGAAGA--GAAAGAAAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404456 77 - 6778120 ACTTGCTTATGATTTC-AAAATTTTTAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAAGTAGGAAGAAGA--GAAAGAAAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 57930 77 - 69927 CCTTGCTTATGATTTC-AAAATTTTTAAAAATTC-CAAAGACC-----------AAGCAAAGTAAGAGTTAGGAAGAAGA--GAAAGAAAAA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 402765 81 - 608964 ACTTGCTTATGATTTTAAAAATTTTGAAAAATTCGAAAAGGCC-----------AAGTGAAAAAAGAAGTGGGAAGAAGAAGGAAAGAGAAA i otoGar3.GL873829 C 0 I 18 s canFam3.chr33 29056279 84 + 31377067 CCTTGCTTGTGAGTTC-ACGATTTTGAAAAATTC-AAAAGGACCGAGAAAAAAAAGGCAGAAAGAGAAGTGGGA----GA--GAAAGAAAAA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I a score=215185.000000 s hg38.chr3_KI270779v1_alt 104811 23 + 205312 CTTTTCTATAA-TCCCACCTCTTA s panTro5.chr3 200088444 23 + 202621043 CTTTTCTATAA-TCCCACCTCTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68023 23 + 190779 CTTTTCTATAA-TCCCACCTCTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32919 23 + 106623 CTTTTCTATAA-TCCCACCTCTTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841044 23 + 123690457 CTTTTCTATAA-TCCCATCACTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441703 23 + 204787373 ATGTCCTATAA-TCCCACCTCTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49531 23 + 192460366 ATGTCCTATAA-TCCCACCTCTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525122 23 + 19675229 ATGTCCTATAA-TCCCACCTCTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460852 23 + 16847902 ATGTCCTATAA-TCCCACCTCTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397209 23 - 91754291 ATGTCCTATAA-TCCCACCTCTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554535 23 - 1977891 ATGTCCTATAA-TCCCACCTCTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433375 23 + 7796314 ATTTTCTATAA-TCCCACCTCTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 913202 23 - 74750902 GTTGTCTATAA-TCCCACCTCTTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441424 23 + 17725628 GTTGTCTATAA-TCCCACCTCTTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404533 23 - 6778120 GTTGTCTATAA-TCGCACCTCTTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 58007 23 - 69927 GTTGTCTATAA-TCCCACCTCTTA i aotNan1.NW_018503669v1 C 0 I 2356 s canFam3.chr33 29056363 22 + 31377067 --CATCTGTAAGCCCCACTTCCTA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I a score=51419.000000 s hg38.chr3_KI270779v1_alt 104834 8 + 205312 GATACAAC s panTro5.chr3 200088467 8 + 202621043 GATACAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68046 8 + 190779 GATACAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32942 8 + 106623 GATACAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841067 8 + 123690457 GACACAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441726 8 + 204787373 GATACAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49554 8 + 192460366 GATACAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525145 8 + 19675229 GATACAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460875 8 + 16847902 GATACAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397232 8 - 91754291 GATACAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554558 8 - 1977891 GATACAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433398 5 + 7796314 GAT---AC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 913225 6 - 74750902 TACACA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441447 8 + 17725628 TATACAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404556 8 - 6778120 TACACAAC i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29056385 8 + 31377067 TACACAGC i canFam3.chr33 C 0 I 42 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=66569.000000 s hg38.chr3_KI270779v1_alt 104842 8 + 205312 GAtttatt s panTro5.chr3 200088475 8 + 202621043 GAtttatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68054 8 + 190779 GAtttatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32950 8 + 106623 GAtttatt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841075 8 + 123690457 GAtttatt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441734 8 + 204787373 GAtttatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49562 8 + 192460366 GAtttatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525153 8 + 19675229 GAtttatt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 460883 8 + 16847902 GAtttatt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397240 8 - 91754291 GATTTATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554566 8 - 1977891 GAtttatt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433403 8 + 7796314 GAtttatt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 913231 8 - 74750902 AGtttatt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441455 8 + 17725628 AGTTTACt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 404564 8 - 6778120 AGtttatt i cebCap1.NW_016107444v1 C 0 I 1961 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056393 42 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=1946508.000000 s hg38.chr3_KI270779v1_alt 104850 286 + 205312 ---ttttaaaa---------------------ttgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggctcactgcagcctccacctccca-gctccagtgatcctcccacctcagcctcctgaggagctgggaccacag----------------ctggctaatttttgtac-tttgttttgtaaaaaaggggctttaccatgttgagcaggttggtctcgatcttctgagctcaagcagtcctcctgcctcagactcgcaaagtgctgggattacagacatgagccactgtgcccagccTTATATACAG s panTro5.chr3 200088483 287 + 202621043 ---tttttaaa---------------------tcgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcggccatggctcactgcagcctccacctcccaggctccagtgatcctcccacctcagcctcctgaggagctgggaccacag----------------ctggctaatttttgtac-ttttttttgtaaaaaaggggctttaccatgttgatcaggttggtctctatcttctgagctcaagcagtcctcctgcctcagactcgcaaagtgctgggattacagacatgagccactgtgcccagccTTATATACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68062 286 + 190779 ---ttttaaaa---------------------ttgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcggccatggctcactgcagcctccacctcccaggctccagtgatcctcccacctcagcctcctgaggagctgggaccacag----------------ctggctaatttttgtac-ttt-ttttgtaaaaaaggggctttaccatgttgatcaggttggtctctatcttctgagctcaagcagtcctcctgcctcagactcgcaaagtgctgggattacagacatgagccactgtgcccagccTTATATACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 32958 286 + 106623 ---ttttaaaa---------------------ttgagacaggctctcactc---tcacccaaactgcagtgcagtggtgcgaccatggctcactgcagcctccacctcccaggctccagtgatcctcccacctcagcctcctgaggagctgggaccacag----------------ctggctaatttttgtac-ttttttttgtaaaaaaggggctttaccatgttgatcaggttggtctcgatcttctgagctcaagcagtcctcctgcctcagactcgcaaagtgct-ggattacagacatgagccactgtgcccagccTTATATACAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841083 301 + 123690457 ---tttttaaa---------------------ttgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggcttactgcagcctccacctcccaggctccagtgatcctcccacctcagcctcctgaggagctgggaccacag--gtgcgccaccacacctgactgatttttgtac-ttttttttgtaaagaaggggctttaccatgttgaccaggttgatctcgatctcctgagctcaagcaatcctcctgcctcagactcgcaaagtgctgggattacaggcatgagccactgtgcccagccTTATATACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202441742 300 + 204787373 ---ttttaaaa---------------------tagagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggcacactgcagccttaacctcccaggctccagtgatcctcccatcttagcctcctgaggagctgggaccacag--atgtgccaccacacctggctaatttttgtac-ttt-ttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccctgtgcccagccTTATATACAG i rheMac8.chr2 C 0 I 23 s macFas5.chr2 49570 300 + 192460366 ---ttttaaaa---------------------tagagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggcacactgcagccttaacctcccaggctccagtgatcctcccatcttagcctcctgaggagctgggaccacag--atgcgccaccacacctggctaatttttgtac-ttt-ttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccctgtgcccagccTTATATACAG i macFas5.chr2 C 0 I 6 s macNem1.NW_012014355v1 525161 300 + 19675229 ---ttttaaaa---------------------tagagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggcacactgcagccttaacctcccaggctccagtgatcctcccatcttagcctcctgaggagctgggaccacag--atgcaccaccacacctggctagtttttgtac-ttt-ttttgtaaagaaggggctttaccatgttgaccaggttggcctcgatctcctgagctcaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccctgtgcccagccTTATATACAG i macNem1.NW_012014355v1 C 0 I 23 s cerAty1.NW_012004056v1 460891 300 + 16847902 ---ttttaaaa---------------------tagagacagggtctcactc---tcactcaaactgcagtgcagtggtgcgaccatggctcactgtagcctcaacctcccaggctccagtgatcctcccgtcttagcctcctgaggagctgggaccacag--atgcgccaccacacctggctaatttttgtac-ttt-ttttgtaaagaaggggctttatcatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctccgactcacaaagtgctgggattacaggcatgagcccctgtgcccagccTTATATACAG i cerAty1.NW_012004056v1 C 0 I 23 s chlSab2.chr15 397248 300 - 91754291 ---TTTAAAAA---------------------TAgagacagggtctcactc---tcactcaaactgcagtgcagtggtgcgaccatggctcactgcagcctcaacctcccaggctccagtgatcctcccgtcttagcctcctgaggagctgggaccacag--atgtgccaccacacctggctaatttttgtac-ttt-ttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccctgtgcccagccTTATATACAG i chlSab2.chr15 C 0 I 23 s manLeu1.NW_012102020v1 554574 300 - 1977891 ---ttttaaaa---------------------tagagacagggtctcactc---tcactcaaactgcagtgcagtggtgtgaccatggctcactgcagcctcaacctcccaggctccagtgatcctcccgtcttagcctcctgaggagctgggaccacag--atgtgccaccacacctggctaatttttgtac-ttt-ttttgtaaagaaggggctttaccatgttgaccagattggtctcgatctcctgagctcaagcaatcctcctgtctccgactcacaaagtgctgggattacaggcatgagcccctgtgcccagccTTATATACAG i manLeu1.NW_012102020v1 C 0 I 23 s colAng1.NW_012118932v1 433411 297 + 7796314 ---ttttaaaa---------------------ttgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggctcactgcagcctcaacctcccaggctacagtgat----ccatcttagcctcctgaggagctgggaccgcag--atgcgccaccacacctggctaatttttgtactttt-ttttgtaaagaaggggctttaccatgttgactaggttagtctcaatctcctgagctcaagcaatcctcctgtctcagactcgcaaagtgctgggattacaggcatgagcccctgtgcccagtcTTATATACAG i colAng1.NW_012118932v1 C 0 I 23 s calJac3.chr17 913239 303 - 74750902 ttattttattattatt--------------ttttgagatgaagtttcactcttgttgcccagcatggagtgcagtggcatgatcttgggtcacggcaacctctgcctctctgattcaagtggttctcctgcctcagccgcccgagttgctgggactacaggcatgcaccatcacatccagctaattttt-ttt-act-tttagtagagatggcgtttctccatgttggtcaggctggtctcaaactcttgacctcaggtgatccgcctgtcttggcctcccaaggtgctgagattaccggcgtgagccactgcacctggc----------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 441463 320 + 17725628 ttattttattattatttatttatttatttattttgaggaggagtttcgctcttgttacctaggctggagtgcaatggcatgatctcggctcaccgcaacctccacctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcgcacaccaccatgcccagctaattttt-tgt-att-tttagtagagacggggtttcaccatgttgaccgggatggtctcgatctcttgacctt--gtgatccacccgcctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcAttat------ i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056393 42 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I a score=19146.000000 s hg38.chr3_KI270779v1_alt 105136 11 + 205312 CTATTATTATT s panTro5.chr3 200088770 11 + 202621043 CTATTATTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68348 11 + 190779 CTATTATTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33244 11 + 106623 CTATTATTATT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841384 11 + 123690457 CTATTATTATT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 49876 11 + 192460366 CTATTATTATT i macFas5.chr2 I 6 C 0 s saiBol1.JH378146 441783 10 + 17725628 -tattattttt i saiBol1.JH378146 C 0 I 1963 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056393 42 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e macNem1.NW_012014355v1 525461 23 + 19675229 I e calJac3.chr17 913542 0 - 74750902 C e colAng1.NW_012118932v1 433708 23 + 7796314 I e manLeu1.NW_012102020v1 554874 23 - 1977891 I e chlSab2.chr15 397548 23 - 91754291 I e cerAty1.NW_012004056v1 461191 23 + 16847902 I e rheMac8.chr2 202442042 23 + 204787373 I a score=6440.000000 s hg38.chr3_KI270779v1_alt 105147 5 + 205312 AATGT s panTro5.chr3 200088781 5 + 202621043 AGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68359 5 + 190779 AGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33255 5 + 106623 AGTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841395 5 + 123690457 AGTGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 49887 5 + 192460366 AGTGT i macFas5.chr2 C 0 I 1 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056393 42 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e macNem1.NW_012014355v1 525461 23 + 19675229 I e calJac3.chr17 913542 0 - 74750902 C e saiBol1.JH378146 441793 1963 + 17725628 I e colAng1.NW_012118932v1 433708 23 + 7796314 I e manLeu1.NW_012102020v1 554874 23 - 1977891 I e chlSab2.chr15 397548 23 - 91754291 I e cerAty1.NW_012004056v1 461191 23 + 16847902 I e rheMac8.chr2 202442042 23 + 204787373 I a score=380829.000000 s hg38.chr3_KI270779v1_alt 105152 375 + 205312 ATACTgtgtattcatttcaattcttaatctctccacttggatgttgatgaaatacatacctcacattcaacatttctttctttttttttttctttttgagatggaaaggagcctggctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaagctccacctcttgggttcacgtgattctcctgcctcagcctcctgagtatctgggactacagg--tgccaccaccatgctcggctaa-ttttttgaattttta-gtagagacggagtttcaccgtgtcagccagcctggtctcaaactcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattccagttaatgag-cactg s panTro5.chr3 200088786 375 + 202621043 ATACTgtgtattcatttcaattcttaatctctccacttggatgttgatgaaatacatacctcacattcaacatttctttcttttttttttcctttttgagatggaaaggagcctggctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcttgggttcacgtgattctcctgcctcagcctcctgagtagctgggactacagg--tgccaccaccatgttcggctaa-ttttttgtattttta-gtagagacggagtttcaccatgtcagccagcctggtctcaaactcctgacctcaagtgacccacccgcctcggcctcccaaagtgctgggattccagttaatgag-ccccg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68364 372 + 190779 ATACTgtgtattcatttcaattcttaatctctccacttggatgttgatgaaatacatacctcacattcaacatttctttc---tttttttcctttttgagatggaaaggagcctggctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcttgggttcacatgattctcctgcctcagcctcctgagtagctgggactacagg--tgccaccaccatgttcggctaa-ttttttgtattttta-gtagagatggagtttcaccatgtcagccagcctggtctcaaactcctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattccagttaatgag-ccccg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33260 375 + 106623 ATACTgtgtattcatttcaattcttaatctctccacttggatgttgatgaaatacatacctcacattcaacatttctttcttttttttttcttttttgagatggaaaggagcctggctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcttgggttcacgtgattctcctgcctcagcctcctgagtagctgggactacagg--tgccaccaccatgctcggctaa-ttttttgtattttta-gtagagacggagtttcaccatgtcagccagcctggtctcaaactcctgacctcaagtgatccacccacctcggcctcccaaaatgctgggattccagttaatgag-caccg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841400 375 + 123690457 ATACTgtgtattcaattcaattcttaatctctccacttggatgttgatgaaatacatacctcacatgcaacatttctttcttttcttttttttttttgagatggaacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctcttgggttcacgtgattctcctgcctcagcctcctgagtagctgggactacagg--tgccgccaccatgctcagctaatttttttgtattttta-gtagagacggagtttcaccgtgtcggccagcctggtctcaaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggattccaggc-atgag-cacca i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 913542 292 - 74750902 -------------------------------------------------------------------cAACAAtttatt-------------ttttcaaattgagacagggcctcactctgtcaccca-actgcagtggagtggtgctgccacagctcactgcagcctcgacctcccatgcttgggtgatcctcccacctcagcctcccgagtagctgggaccacagagttg----caccacacctggctaa--cttttgtatttttctgtagagacgggactttcccatgttgcccaggtttgtctcaatctgctgagttcaaggaatcctcccgcctcagcctcccaaagtgctgggattacaggc-atgagccactg i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056393 42 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e macNem1.NW_012014355v1 525461 23 + 19675229 I e saiBol1.JH378146 441793 1963 + 17725628 I e colAng1.NW_012118932v1 433708 23 + 7796314 I e manLeu1.NW_012102020v1 554874 23 - 1977891 I e chlSab2.chr15 397548 23 - 91754291 I e cerAty1.NW_012004056v1 461191 23 + 16847902 I e macFas5.chr2 49892 1 + 192460366 I e rheMac8.chr2 202442042 23 + 204787373 I a score=12467.000000 s hg38.chr3_KI270779v1_alt 105527 10 + 205312 ctcctggcct s panTro5.chr3 200089161 10 + 202621043 ctcctggcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68736 10 + 190779 ctcctggcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33635 10 + 106623 ctcctggcct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841775 10 + 123690457 ctcccggcct i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 913834 10 - 74750902 tgcccagccT i calJac3.chr17 C 0 I 1651 s canFam3.chr33 29056435 10 + 31377067 Ctcctacatt i canFam3.chr33 I 42 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e macNem1.NW_012014355v1 525461 23 + 19675229 I e saiBol1.JH378146 441793 1963 + 17725628 I e colAng1.NW_012118932v1 433708 23 + 7796314 I e manLeu1.NW_012102020v1 554874 23 - 1977891 I e chlSab2.chr15 397548 23 - 91754291 I e cerAty1.NW_012004056v1 461191 23 + 16847902 I e macFas5.chr2 49892 1 + 192460366 I e rheMac8.chr2 202442042 23 + 204787373 I a score=3873.000000 s hg38.chr3_KI270779v1_alt 105537 5 + 205312 ccaca s panTro5.chr3 200089171 5 + 202621043 ccacg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68746 5 + 190779 ccacg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33645 5 + 106623 ccaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841785 5 + 123690457 ccaca i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29056445 5 + 31377067 cggta i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e macNem1.NW_012014355v1 525461 23 + 19675229 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I e colAng1.NW_012118932v1 433708 23 + 7796314 I e manLeu1.NW_012102020v1 554874 23 - 1977891 I e chlSab2.chr15 397548 23 - 91754291 I e cerAty1.NW_012004056v1 461191 23 + 16847902 I e macFas5.chr2 49892 1 + 192460366 I e rheMac8.chr2 202442042 23 + 204787373 I a score=204856.000000 s hg38.chr3_KI270779v1_alt 105542 34 + 205312 tttctaaaatcgaagttctgatcttttcctctgg s panTro5.chr3 200089176 34 + 202621043 tttctaaaatcgaagttctgatcttttcctctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68751 34 + 190779 tttctaaaatcgaagttctgatcttttcctctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33650 34 + 106623 tttctaaaatcgaagctctgatcttttcctctgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841790 34 + 123690457 tttctaaaatcaaagttctgatcttttcctctgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442065 34 + 204787373 TTtctaaaatcgaagttctgatctcttcctctgg i rheMac8.chr2 I 23 C 0 s macFas5.chr2 49893 34 + 192460366 TTtctaaaatcgaagttctgatctcttcctctgg i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 525484 34 + 19675229 TTtctaaaatcgaagttctgatctcttcctctgg i macNem1.NW_012014355v1 I 23 C 0 s cerAty1.NW_012004056v1 461214 34 + 16847902 TTtctaaaatcgaagttctgatctctttgtctgg i cerAty1.NW_012004056v1 I 23 C 0 s chlSab2.chr15 397571 34 - 91754291 TTtctaaaatcaaagttctgatctcttcgtctgg i chlSab2.chr15 I 23 C 0 s manLeu1.NW_012102020v1 554897 34 - 1977891 TTtctaaaatcgaagttctgatctcttcctctgg i manLeu1.NW_012102020v1 I 23 C 0 s colAng1.NW_012118932v1 433731 34 + 7796314 TTtctaaaatcgaagttctgatctcttcctctgg i colAng1.NW_012118932v1 I 23 C 0 s canFam3.chr33 29056450 34 + 31377067 cgtccaaagccagagtcttaatctggatcccaag i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7406808 618 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=86963.000000 s hg38.chr3_KI270779v1_alt 105576 11 + 205312 acctgccccac s panTro5.chr3 200089210 11 + 202621043 acctgccccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68785 11 + 190779 acctgccccac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33684 11 + 106623 acctgccccac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841824 11 + 123690457 acctgccccac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442099 11 + 204787373 acctgccccac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49927 11 + 192460366 acctgccccac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525518 11 + 19675229 acctgccccac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461248 11 + 16847902 acctgccccac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397605 11 - 91754291 acctgccccac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554931 11 - 1977891 acctgccccac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433765 11 + 7796314 acctgccccac i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7407426 11 + 22200726 acctgctccac i proCoq1.NW_012133858v1 I 618 C 0 s canFam3.chr33 29056484 10 + 31377067 -ccggctctgc i canFam3.chr33 C 0 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65421901 961 - 98207768 I e dasNov3.JH569502 3879206 1448 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=1862856.000000 s hg38.chr3_KI270779v1_alt 105587 264 + 205312 ctgcatcttccccatctcagttaacgtcagttgcatccttcaggtgctcaggccgaaatcctcggcaccg-tctttattcccc------tctcacattttgca---------ccaggaaattctgctggctctaaggccatcaaactgtgcccagaatgtggcccctc---ctcagcatctccagtg--ctaccaccgagatggtccacgatgccatcatctctcacctgcact----------------acta-------caggtctccctgtttccagctcagccccc--ac-----cccagtctagtcccag s panTro5.chr3 200089221 250 + 202621043 ctgcatcttccccatctcagttaacatcaattgcatccttcagttgctcaagccgaaatcctcggcaccgttctttattcccc------tctcacattttgca---------ccaggaaattctgctggctctaaggccttctaactgtgcccagaatgtggcccctc---ctcag-----------------caccgagatggtccacgatgccatcatctctcacctgcact----------------acta-------caggtctccctgtttccagctcagccccc--ac-----cccagtctagtcccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 68796 265 + 190779 ctgcatcttccccatctcagttaacgtcaattgcatccttcagttgctcaagccgaaatcctcggcaccgttctttattcccc------tctcacattttgca---------ccaggaaattctgctggctctaaggccatctaactgtgcccagaatgtggcccctc---ctcagcatctccagtg--ctaccaccgagatggtccacgatgccatcatctctcacctgcact----------------acta-------caggtctccctgtttccagctcagccccc--ac-----cccagtctagtcccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33695 265 + 106623 ctgcatcttccccatctcagttaacgtcaattgcatccttcagctgctcaagccgaaatcctcggcaccgttctttattcccc------tctcacattttgca---------ccaggaaattctgctggctctaaggccatcaaactgtgcccagaatgtggcccctc---ctcagcatctccagtg--ctaccaccgagatggtccacgatgccatcatctctcacctgcact----------------acta-------caggtctccctgtttccagctcagccccc--ac-----cccagtctggtcccag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120841835 265 + 123690457 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagctgaaatccgcggcaccgttctttattccta------tctcacattttgca---------ctgggaaattctgctggctctactgccatcaaactatgcccagaatgtggcccctc---ctcagcatctccagtg--ctaccaccgagatggtccacgatgccatcatctctcacctgcact----------------acta-------caggtctccctgtttccagctctgccccc--ac-----cccagtctagtcccaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442110 267 + 204787373 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tctctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctc---ctcagcatctccagtg--ctaccaccaagatggtccacgatgccgtcatctctcacctgcact----------------acta-------cgggtcttcctgtttccagctctgccccc--ac-----cccagtctagtcccaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 49938 267 + 192460366 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tctctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctc---ctcagcatctccagtg--ctaccaccaagatggtccacgatgccgtcatctctcacctgcact----------------acta-------cgggtcttcctgtttccagctctgccccc--ac-----cccagtctagtcccaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525529 267 + 19675229 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tctctcacgtgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctc---ctcagcatctccagtg--ctaccaccaagatggtccacgatgccgtcatctctcacctgcact----------------acta-------cgggtcttcctgtttccagctctgccccc--ac-----cccagtctagtcccaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461259 267 + 16847902 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tctctcacatgttgca---------ccaggaaattctgctggctctactgtcatcaaactgtgcccagaatctggcccctc---ctcagcatctccagtg--ctaccaccaagatggtccatgatgccgtcatctctcacctgcact----------------acta-------tgggtcttcctgtttccagctctgccccc--ac-----cccagtctagttccag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397616 267 - 91754291 ctgcatcttccccatctcagttaatatcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tgtctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctc---ctcagcatctccagtg--ctaccaacaagatggtccacgatgccgtcatctctaacctgcact----------------acta-------caggtcttcctgtttccagctctgccccc--ac-----cccagtctagttccaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 554942 267 - 1977891 ctgcatcttccccatctcagttaatatcaattgcatccttcagttgctcaagctgaaatcctcggcactgttctttattcctc----tctctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctc---ctcagcatctccagtg--ctaccaccaagatggtccacgatgccgtcatctctcacctgcact----------------acta-------cgggtcttcctgtttccagctctgccccc--ac-----cccagtctagttccaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 433776 267 + 7796314 ctgcatcttccccatctcagttaatgtcaattgcgtccttcagttgctgaagccgaaatcctcggcactgttctttattcctc----tctctcacgttttgca---------ccaggaaattctgctggctctacagccatcaaactgtgcccagaatctggcccctc---ctcagcatctcctgtg--ctaccaccaagatggtccacgatgccgtcatctctcacctgcact----------------acta-------caggtctccctgtttccagctctgccccc--ac-----cccagtctagtcccaa i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7407437 286 + 22200726 ctgtgtcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccagcatccttggcaccattcttcattcctct--ttctcttacgtttccca---------tccgcaaattctgttggctctactgcc-tcaaactatgcccagaatcccgcccctc---ctcatcccctccactg--ctatcaccaagatggtgtaagatgctaccatctctcacctggattactgcagtccacagtcacta-------cgggtctccctgtttccacctttgccccccaac-----cccggtctagttccaa i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65422862 259 - 98207768 ctgtgtctccctttgctcagttcattcctcttgcacccttcagccgctcctgccg-------ctgaaccattaatcattttcc----tttctcatattttata---------caagaaaattcaaccggtttctcttcc-tcgaacaatgccca----ctctccccacgaacttgccatctcggcag--ccatcactcaggtgggctgagatgctactgtctctcacc---atg----------------acta-------caga-ctccctgttggtacctgtgcccac--ctgaacacccgctctcatccccg i mm10.chr16 I 961 C 0 s canFam3.chr33 29056494 275 + 31377067 ctgtgtccgctccctcctgg-------cagccacgtccttcagttgctcaagccaaagttctcaaaaccagtcttcattcccctagttccctcactctttacacccagctcgccagaggattccactggctctcctgttgtcaaattct--ccagagtccggccttt----ctcagcctctccactgccccccctccaag-----cccagctgccaccgtccctctcctggatt----------------cctgataccctcgcggctctctctttccacctttgccccc--ACG----CCCGGTGTCGTCCCAG i canFam3.chr33 C 0 I 318 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e dasNov3.JH569502 3879206 1448 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=632307.000000 s hg38.chr3_KI270779v1_alt 105851 88 + 205312 tgtgtcagccagggctgtctttttacaacataaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagc s panTro5.chr3 200089471 88 + 202621043 tgtgtcagccagggctgtctttttacaacgtaaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcaggagaaaaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69061 88 + 190779 tgtgtcagccagggctgtctttttacaacgtaaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcaggagaaaaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 33960 88 + 106623 tgtgtcagccagggctgtctttttacaacataaggcagaccccaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagc i gorGor5.CYUI01000576v1 C 0 I 5 s nomLeu3.chr11 120842100 88 + 123690457 tgtgtcagcaagggctgtctttttacaacataaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagc i nomLeu3.chr11 C 0 I 5 s rheMac8.chr2 202442377 88 + 204787373 tatgtcagccagggctgtctttttacaacataaggcagaccacaccacttccttgctcc-a-atcctcccatttcacttagaagaaaagc i rheMac8.chr2 C 0 I 5 s macFas5.chr2 50205 88 + 192460366 tatgtcagccagggctgtctttttacaacataaggcagaccacaccacttccttgctcc-a-atcctcccatttcacttagaagaaaagc i macFas5.chr2 C 0 I 5 s macNem1.NW_012014355v1 525796 88 + 19675229 tatgtcagccagggctgtctttttacaacataaggcagaccacaccacttccttgctcc-a-atcctcccatttcacttagaagaaaagc i macNem1.NW_012014355v1 C 0 I 5 s cerAty1.NW_012004056v1 461526 88 + 16847902 tgtgtcagccagggctgtctttttacaacataaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagc i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 397883 88 - 91754291 tgtgtcagccagggctgtctttttacaacataaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagt i chlSab2.chr15 C 0 I 5 s manLeu1.NW_012102020v1 555209 88 - 1977891 tgtgtcagccagggctgtctttttacaacataaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagc i manLeu1.NW_012102020v1 C 0 I 5 s colAng1.NW_012118932v1 434043 88 + 7796314 tgtgtcagccagggctgtctttttacagcataaggcagaccacaccacttctttgctcc-a-atcctcccatttcactcagaagaaaagc i colAng1.NW_012118932v1 C 0 I 5 s proCoq1.NW_012133858v1 7407723 89 + 22200726 tatggcagccagagctgtctttttataacggaaggcagatcatgccactcctttgctccaa-atcctcccatctcattcagaggaaaagc i proCoq1.NW_012133858v1 C 0 I 17 s mm10.chr16 65423121 79 - 98207768 gatgttagctggaaatttctcttcctagcatgtggcaggc----------ctgtgcttc-atactcttccgtttcattcagaggaaaagc i mm10.chr16 C 0 I 5 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056769 318 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=67411.000000 s hg38.chr3_KI270779v1_alt 105939 11 + 205312 tccgacaacag s panTro5.chr3 200089559 11 + 202621043 tctgacaacag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69149 11 + 190779 tctgacaacag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34053 11 + 106623 tctgacaacag i gorGor5.CYUI01000576v1 I 5 C 0 s nomLeu3.chr11 120842193 11 + 123690457 tctgacaacgg i nomLeu3.chr11 I 5 C 0 s rheMac8.chr2 202442470 11 + 204787373 tctgacaacgg i rheMac8.chr2 I 5 C 0 s macFas5.chr2 50298 11 + 192460366 tctgacaacgg i macFas5.chr2 I 5 C 0 s macNem1.NW_012014355v1 525889 11 + 19675229 tctgacaacgg i macNem1.NW_012014355v1 I 5 C 0 s cerAty1.NW_012004056v1 461619 11 + 16847902 tctgacaacgg i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 397976 11 - 91754291 tctgacaacgg i chlSab2.chr15 I 5 C 0 s manLeu1.NW_012102020v1 555302 11 - 1977891 tctgacaacgg i manLeu1.NW_012102020v1 I 5 C 0 s colAng1.NW_012118932v1 434136 11 + 7796314 tctgacaaggg i colAng1.NW_012118932v1 I 5 C 0 s mm10.chr16 65423205 11 - 98207768 ttgggcaacag i mm10.chr16 I 5 C 0 e proCoq1.NW_012133858v1 7407812 17 + 22200726 I e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056769 318 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=139625.000000 s hg38.chr3_KI270779v1_alt 105950 24 + 205312 -ctgcaaagcc-gtgcacgacctgcg s panTro5.chr3 200089570 24 + 202621043 -ctgcaaagcc-gtgcacgacctgcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69160 24 + 190779 -ctgcaaagcc-gtgcacgacctgcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34064 24 + 106623 -ctgcaaagcc-atgcacgacctgcg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842204 24 + 123690457 -ttgcaaagcc-atgcacgacctgcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442481 24 + 204787373 -ctacaaagcc-atacagaacctgcg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50309 24 + 192460366 -ctacaaagcc-atacagaacctgcg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525900 24 + 19675229 -ctacaaagcc-atacagaacctgcg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461630 24 + 16847902 -ctgcaaagcc-atacaggacctgcg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 397987 24 - 91754291 -ctgcaaagcc-atacaggacctgcg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555313 24 - 1977891 -ctgcaaagcc-atacaggacctgcg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434147 24 + 7796314 -ctgcaaagcc-atacatgacctgcg i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7407829 24 + 22200726 -ctgcaaagct-gtacatgattggca i proCoq1.NW_012133858v1 I 17 C 0 s mm10.chr16 65423216 26 - 98207768 cctgtagaacaggtgaataatgggta i mm10.chr16 C 0 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e dasNov3.JH569502 3879206 1448 + 6579706 I e canFam3.chr33 29056769 318 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=10500.000000 s hg38.chr3_KI270779v1_alt 105974 1 + 205312 c s panTro5.chr3 200089594 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69184 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34088 1 + 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842228 1 + 123690457 c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442505 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50333 1 + 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525924 1 + 19675229 c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461654 1 + 16847902 c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398011 1 - 91754291 c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555337 1 - 1977891 c i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434171 1 + 7796314 c i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7407853 1 + 22200726 c i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65423242 1 - 98207768 c i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3880654 1 + 6579706 c i dasNov3.JH569502 I 1448 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e canFam3.chr33 29056769 318 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=1454347.000000 s hg38.chr3_KI270779v1_alt 105975 223 + 205312 ccctc-ccctgcctccttaatttgctgactgcaccgcagccaca---cggacgtctttcttgtcccttgaatgcgctgggcctgctc-------ttgccttgggacctttctgtgca--ttgcttagtctgctcagaagccttctcctctacatatccacttgtctaaac----cctctacctcca---ccttc--atgcc-------------ccttctcagcgaggtctacc----atgac-----catgctgcctacaaatt--ca s panTro5.chr3 200089595 223 + 202621043 ccctc-ccctgcctccttaatttgctcactgaaccgcagccaca---cggatgtctttcttgtctcttgaatgcgctgggcctgctc-------ttgccttgggacctttctgtgca--tggcttagtctgctcagaagccttctcctctacatatccacttgtctaaac----cctctacctcca---ccttc--atgcc-------------ccttctcagtgaggtctacc----atgac-----catgctgcctacaaatt--ca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69185 223 + 190779 ccctc-ccctgcctccttaatttgctcactgaaccgcagccaca---cggacgtctttcttgtctcttgaatgcgctgggcctgctc-------ttgccttgggacctttctgtgca--tggcttagtctgctcagaagccttctcctctacatatccacttgtctaaac----cctctacctcca---ccttc--atgcc-------------ccttctcagtgaggtctacc----atgac-----catgctgcctacaaatt--ca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34089 223 + 106623 ccctc-ccctgcctccttaatttgctcactgaaccgcagccaca---cggacgtctttcttgtcccttgaatgcgctgggcctgctc-------ttgccttgggacctttctgtgca--ttgcttagtctgctcagaagccttctcctctacatatccacttgtctaaac----cctctacctcca---ccttc--atgcc-------------ccttctcagcgaggtctacc----gtgac-----catgctgcctacaaatt--ca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842229 223 + 123690457 ccctc-ccctgcctcctgaatttgctcactgcactgcagccaca---cggacgtctttcttgtcccttaaatgcagtgggcctgctc-------ttgccttgggccctttctgtgcg--ttgcttagtctgctcagaagccttctcctccacctatccacttgtctaaac----cctctacctcca---ccttc--acgcc-------------ccttctcagcgagttctacc----atgac-----catgctgcctacaaatt--ca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442506 206 + 204787373 ccctc-ccctgcctccttaatt-------tgcaccacagccaca---ctgacgtctttcttgtcccttgaatgcactgggcctgctc-------ttgccttgggacctttctgtgca--ttgctcagtctgctc---------ctcctctgcatatccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcaaggtctgcc----atgac-----catgctgcttaaaaatt--ca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50334 206 + 192460366 ccctc-ccctgcctccttaatt-------tgcaccacagccaca---ctgacgtctttcttgtcccttgaatgcactgggcctgctc-------ttgccttgggacctttctgtgca--ttgctcagtctgctc---------ctcctctgcatatccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcaaggtctgcc----atgac-----catgctgcttaaaaatt--ca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 525925 206 + 19675229 ccctc-ccctgcctccttaatt-------tgcaccacagccaca---ctgacgtctttcttgtcccttgaatgcactgggcctgctc-------ttgccttgggacctttctgtgca--ttgctcagtctgctc---------ctcctctgcatatccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcaaggtctgcc----atgac-----catgctgcttaaaaatt--ca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461655 217 + 16847902 ccct--ccctgcctccttaatttgctcactgcaccacagccaca---ct----tctttcttgtcccttgaatgcactgggcctgctc-------ttgccttgggacctttctgtgca--ttgctcagtctgctcaggagccttctcctctgcatatccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcgaggtctgcc----atgac-----catgctgcttaaaaatt--ca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398012 214 - 91754291 ccct--ccctgcctccttaatt-------tgcaccacagccaca---ctgacatctttcttgtcccttgaatgcactgggcctgctc-------ttgccttgggacctttctgtgcg--ttgctcagtctgctcaggagccttctcctctgcatatccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcgaggtctgcc----atgac-----catgctgcttaaaaatt--ca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555338 217 - 1977891 ccct--ccctgcctccttaatttgctcactgcaccacagccaca---ct----tctgtcttgtcccttgaatgcactgggcctgctc-------ttgccttgggacctttctgtgcg--ttgctcagtctgctcagaagccttctcctctgcatgtccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcgaggtctgcc----atgac-----catgctgcttaaaaatt--ca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434172 222 + 7796314 ccctc-ccctgccaccttaatttgctcactgcaccacagccaca---ctgacatctttcttgtcccttgaatgcactgggcctgctc-------ttgccttgggatctttctgtgca--ttgctcagtctgctcagaagtcttctcctctccatatccacttggct-aac----cctctacctcca---ccttc--acgtc-------------ccttctcagcgaggtctgcc----atgac-----cacgctgcttaaaaatt--ca i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7407854 227 + 22200726 ccctctgcccatctctttaacttgctcactgcactgcagccaca---ctgagttctttgctgttccttgaatgcatcgggcctgctc-------gggccttgggacctttgtgtgca--ttgctcggtctgcttagaaggtttctcctctagacatttgctcagctaact----cctccatctccacccccttc--atgtc-------------ccttctcagtgaggcctacc----ctgac-----caccctatttaaaaatt--ca i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65423243 242 - 98207768 tgctgtagccgcctctctagcctgctctttgta----agccgcaaagcaaggaacttggctgttcctgggatgtgccagatctgctcaggtcttgggccttggggcctttgtgtgta--ttgttctgtctgcttagaaggcctctcctccagacatctgctcaatg-cct----cctccctctcca---cctccttctgcc-------------cctcctcaaTATACTCTACCCACAATGCCCTTTTCACGCTACATACCGACTGCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29057087 176 + 31377067 CCCCC-CCCCGCCCCCTGAACTTGCTCACTTCACTGCAGGGACG---CTGACCTCTC------------GGCGCCCGGGAACCCATC-------AGGCCTCG---------CATGCA--CTGCTCAGTTTGCTCAGAGGCCTTCTCCTGCAGATACCGACCTGACC-AAC---------AGCTCCA---CCTCC---TTCC-------------CCCTCTCGGTGGGGCCACCC------GAc-----ca------------------- i canFam3.chr33 I 318 C 0 s dasNov3.JH569502 3880655 234 + 6579706 ctacc-cccagcagccaccacctgctccctgccctctagccacc---ctgacttcctggctgtttctggaaagcatcgggcctgctg-------ctgtccagggacct---catgcagcttgctcagtttgcttggaatgcttctccaccagatacccacctggct-aactgcccccccacctt-----ccttc--acatctgctgaattgccgtcttctcaa-gagatctgcc-----ccac-----caccctatttacaaatg--ca i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I e calJac3.chr17 913844 1651 - 74750902 I e saiBol1.JH378146 441793 1963 + 17725628 I a score=15641.000000 s hg38.chr3_KI270779v1_alt 106198 2 + 205312 gt s panTro5.chr3 200089818 2 + 202621043 gt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69408 2 + 190779 gt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34312 2 + 106623 gt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842452 2 + 123690457 gt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442712 2 + 204787373 gt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50540 2 + 192460366 gt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526131 2 + 19675229 gt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461872 2 + 16847902 gt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398226 2 - 91754291 gt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555555 2 - 1977891 gt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434394 2 + 7796314 gt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 915495 2 - 74750902 gc i calJac3.chr17 I 1651 C 0 s saiBol1.JH378146 443756 2 + 17725628 gc i saiBol1.JH378146 I 1963 C 0 s proCoq1.NW_012133858v1 7408081 2 + 22200726 ac i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65423485 1 - 98207768 -T i mm10.chr16 C 0 I 49 s dasNov3.JH569502 3880889 2 + 6579706 gc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e canFam3.chr33 29057263 0 + 31377067 C e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 404572 1961 - 6778120 I a score=312189.000000 s hg38.chr3_KI270779v1_alt 106200 31 + 205312 ct------ccccttc--tgtactttgacgtactttatag s panTro5.chr3 200089820 31 + 202621043 ct------ccccttc--tgtactttgacgtactttatag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69410 31 + 190779 ct------ccccttc--tgtactttgacgtactttatag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34314 31 + 106623 ct------ccccttc--tgtactttgatgtactttatag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842454 31 + 123690457 ct------ccccatc--tgtactttgatgtactttatag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442714 31 + 204787373 ct------ccccttc--tgtactttgatgtactttacag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50542 31 + 192460366 ct------ccccttc--tgtactttgatgtactttacag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526133 31 + 19675229 ct------ccccttc--tgtactttgatgtactttacag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461874 31 + 16847902 ct------ccccttc--tgtactttgatgtactttacag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398228 31 - 91754291 ct------ccccttc--tgtactttgatgtactttacag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555557 31 - 1977891 ct------ccccttc--tgtactttgatgtactttacag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434396 31 + 7796314 ct------ccccttc--tgcactttgatgtactttacga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 915497 31 - 74750902 ct------ccccttc--tgtattttgatgtacattatag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 443758 31 + 17725628 ct------ccccttc--tgtattttgatgtacattatag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 406533 31 - 6778120 ct------ccccttc--tgtattttgatgtacattacag i cebCap1.NW_016107444v1 I 1961 C 0 s proCoq1.NW_012133858v1 7408083 31 + 22200726 ct------cccctcc--tctgctatgatttcattcatag i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65423535 37 - 98207768 ctgtgtagccctggc--tgtcctagaactcactctgtag i mm10.chr16 I 49 I 96 s canFam3.chr33 29057263 27 + 31377067 ----------cctcc--tctgctttgattttcttcttaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3880891 33 + 6579706 ct------tccccacatcccattttgttttcgtttatag i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=318532.000000 s hg38.chr3_KI270779v1_alt 106231 29 + 205312 tgctgatcacaattgaacgtcatacatat s panTro5.chr3 200089851 29 + 202621043 tgctgatcacaattgaacatcatacatat i panTro5.chr3 C 0 I 4 s panPan2.chrUn_NW_014024201v1 69441 29 + 190779 tgctgatcacaattgaacatcatacatat i panPan2.chrUn_NW_014024201v1 C 0 I 4 s gorGor5.CYUI01000576v1 34345 29 + 106623 tgctgatcacaattgaacatcatacatgt i gorGor5.CYUI01000576v1 C 0 I 4 s nomLeu3.chr11 120842485 29 + 123690457 cgctgatcacaattgaacatcatacgtat i nomLeu3.chr11 C 0 I 4 s rheMac8.chr2 202442745 29 + 204787373 tgctgatcacagttgaacatcatatgtat i rheMac8.chr2 C 0 I 4 s macFas5.chr2 50573 29 + 192460366 tgctgatcacagttgaacatcatacgtat i macFas5.chr2 C 0 I 4 s macNem1.NW_012014355v1 526164 29 + 19675229 tgctgatcactgttgaacatcatacgtat i macNem1.NW_012014355v1 C 0 I 4 s cerAty1.NW_012004056v1 461905 29 + 16847902 tgctgatcacaattgaacatcatacatat i cerAty1.NW_012004056v1 C 0 I 4 s chlSab2.chr15 398259 29 - 91754291 tgctgatcacaattgaacatcatacatat i chlSab2.chr15 C 0 I 4 s manLeu1.NW_012102020v1 555588 29 - 1977891 tgctgatcacaattgaacatcatacatat i manLeu1.NW_012102020v1 C 0 I 4 s colAng1.NW_012118932v1 434427 29 + 7796314 tgctgatcacaattgaacatcatacatat i colAng1.NW_012118932v1 C 0 I 4 s calJac3.chr17 915528 26 - 74750902 cgctgatcacgatggaacatcataca--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 443789 29 + 17725628 tgctgatcacaattgaacatcatacatgt i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 406564 29 - 6778120 tgctgatcacaattgaacatcatacatat i cebCap1.NW_016107444v1 C 0 I 4 s proCoq1.NW_012133858v1 7408114 29 + 22200726 cgctgataacaacttaacatcatacatac i proCoq1.NW_012133858v1 C 0 I 4 s canFam3.chr33 29057290 29 + 31377067 tgctgattccaacctaacataatacatat i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3880924 29 + 6579706 aactggccacaacctcacataatacatat i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25887554 2729 - 114275543 I e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65423572 96 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=82216.000000 s hg38.chr3_KI270779v1_alt 106260 7 + 205312 tttgttt s panTro5.chr3 200089884 7 + 202621043 tttgttt i panTro5.chr3 I 4 C 0 s panPan2.chrUn_NW_014024201v1 69474 7 + 190779 tttgttt i panPan2.chrUn_NW_014024201v1 I 4 C 0 s gorGor5.CYUI01000576v1 34378 7 + 106623 tttgttt i gorGor5.CYUI01000576v1 I 4 C 0 s nomLeu3.chr11 120842518 7 + 123690457 ttcattt i nomLeu3.chr11 I 4 C 0 s rheMac8.chr2 202442778 7 + 204787373 tttgttt i rheMac8.chr2 I 4 C 0 s macFas5.chr2 50606 7 + 192460366 tttgttt i macFas5.chr2 I 4 C 0 s macNem1.NW_012014355v1 526197 7 + 19675229 tttgttt i macNem1.NW_012014355v1 I 4 C 0 s cerAty1.NW_012004056v1 461938 7 + 16847902 tttgttt i cerAty1.NW_012004056v1 I 4 C 0 s chlSab2.chr15 398292 7 - 91754291 tttgttt i chlSab2.chr15 I 4 C 0 s manLeu1.NW_012102020v1 555621 7 - 1977891 tttgttt i manLeu1.NW_012102020v1 I 4 C 0 s colAng1.NW_012118932v1 434460 7 + 7796314 tttattt i colAng1.NW_012118932v1 I 4 C 0 s saiBol1.JH378146 443822 7 + 17725628 tttgttt i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 406597 7 - 6778120 tttgttt i cebCap1.NW_016107444v1 I 4 C 0 s micMur3.chr1 25890283 7 - 114275543 tttgtct i micMur3.chr1 I 2729 C 0 s proCoq1.NW_012133858v1 7408147 7 + 22200726 tttgtct i proCoq1.NW_012133858v1 I 4 C 0 s canFam3.chr33 29057319 7 + 31377067 tttatgt i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3880953 7 + 6579706 tttattt i dasNov3.JH569502 C 0 I 5 e otoGar3.GL873829 402846 18 - 608964 I e mm10.chr16 65423572 96 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 915554 0 - 74750902 C a score=649953.000000 s hg38.chr3_KI270779v1_alt 106267 53 + 205312 tctttattatctgagtcctccaactag-aatgaaagattttgcccattatggtt s panTro5.chr3 200089891 53 + 202621043 tctttattatctgagtcctccaactag-aatgaaagattttgcccattatggtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69481 53 + 190779 tctttattatctgagtcctccaactag-aatgaaagattttgcccattatggtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34385 53 + 106623 tctttattatctgagtcctccaactag-aatgaaagattttgcccattatggtt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842525 53 + 123690457 tcattattatctgtgtcccccaactag-aatgaaagattttgcccattatggtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442785 53 + 204787373 tctttattatctgtgtcccccaactag-aatgaaaggttttgccctttacggtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50613 53 + 192460366 tctttattatctgtgtcccccaactag-aatgaaaggttttgccctttacggtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526204 53 + 19675229 tctttattatctgtgtcccccaactag-aatgaaaggttttgccctttacggtt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461945 53 + 16847902 tctttattatctgtgtcccccaactag-aatgaaaggttttgccctttacggtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398299 53 - 91754291 tctttattatctgtgtcccccaactag-aatgaaagattttgccctttacagtt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555628 53 - 1977891 tctttagtatctgtgtcccccaactag-aatgaaaggttttgccctttacggtt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434467 53 + 7796314 tctttattatctgtgtcccccaactag-aatgaaagattttgccctttacggtt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 915554 49 - 74750902 ----tattatctgagtccctcaactac-aatgaaagattttgcccattatggta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 443829 53 + 17725628 tctttattatctgagtcccccaaccag-aatgaaagattttgcccattatggta i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 406604 53 - 6778120 tctttattatctgagtcccccaattag-aatgacagattttgcccattatggta i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25890290 54 - 114275543 tgtttattatctgtgtcccccaactagaaatggaaaattttgccttttaccgta i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7408154 53 + 22200726 tgtttattatctgtgccccccaactag-aatgaaagattttgccctttaccaca i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65423668 53 - 98207768 TCTTTATCACCAGAGTCCTTCAACTAT-AATCATATCCTTTGCCTATTGTGATG i mm10.chr16 I 96 C 0 s canFam3.chr33 29057330 53 + 31377067 gtcttattatccgtctccctcaactgg-aatgtgagcgttcgctcactccggct i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 3880965 52 + 6579706 tcgtgttgacctgtctccctcaactgg-catggaag-ctttgcctgttgttgta i dasNov3.JH569502 I 5 C 0 e otoGar3.GL873829 402846 18 - 608964 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=3337052.000000 s hg38.chr3_KI270779v1_alt 106320 280 + 205312 tccctagtgccaagaa------cagtacctggcacatacca---ggggctcagt--------------------------aaacatt------------------------------------------------tgttagatgaatgaaGGAAACAAGGAGACAATGTTGAT-GCTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACAGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTCGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCATATATGTTGGGCAGCTGCCGCAGAAGAGAGACTGAGCTATGTGCCGTGGAGG---AT------TCAAATCTG-----TCTCTTCTCC-CAGG-- s panTro5.chr3 200089944 280 + 202621043 tccctagtgccaagaa------cagtacctggcacatacca---ggggctcagt--------------------------aaatatt------------------------------------------------tgttagatgaatgaaGGAAACAAGGAGACAATGTTGAT-GCTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACAGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCATATATGTTGGGCAGCTGCTGCAGAAGAGAGACTGAGCTATGTGCCATGGAGG---AT------TCAAATCTG-----TCTCTTCTCC-CAGG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69534 280 + 190779 tccctagtgccaagaa------cagtacctggcacatacca---ggggctcagt--------------------------aaatatt------------------------------------------------tgttagatgaatgaaGGAAACAAGGAGACAATGTTGAT-GCTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCATATATGTTGGGCAGCTGCCGCAGAAGAGAGACTGAGCTATGTGCCGTGGAGG---AT------TCAAATCTG-----TCTCTTCTCC-CAGG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34438 279 + 106623 tccctagtgccaagaa------cagtacctggcacatacca---ggggctcagt--------------------------aaacatt------------------------------------------------tgttagatgaatgaaGGAAACAAGGAGACAATGTTGAT-GCTGCTGTGAGCAA-GGGA----------GTCTGAACGTTTGATGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCAAAAAGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCATATATATTGGGCAGCTGCCGCAGAAGAGAGACTGAGCTATGTGCCGTGGAGG---AT------TCAAATCTG-----TCTCTTCTCC-CAGG-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842578 280 + 123690457 ttcctagtgccaagaa------cagtacctggcacatacca---ggggctcagt--------------------------aaacatt------------------------------------------------tgttagatgagtgaaGGAAACAAGGAGACAGTGTTGAT-ATTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATT----CGCCCAT-------------------------------------------------------------------------------------CTT----GGCATATATGTTGAGCACCTGCCACAGAAGAGAGACTGAGCTATGTGCCGTGGAGG---AT------TCAAATCTG-----TCTCTTCTCC-CAGG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202442838 280 + 204787373 tccctagtgccaagaa------cagtacctggcacatgcca---ggggctcaga--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGGAGG---AT------TCAAACCTG-----TCTCTTCTCC-CAGG-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50666 280 + 192460366 tccctagtgccaagaa------cagtacctggcacatgccg---ggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGGAGG---AT------TCAAACCTG-----TCTCTTCTCC-CAGG-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526257 280 + 19675229 tccctagtgccaagaa------cagtacctggcacatgccg---ggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------ATGTGAGCGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGGAGG---AT------TCAAACCTG-----TCTCTTCTCC-CAGG-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 461998 280 + 16847902 tccctagtgccaagaa------cagtacctggcacatgccg---ggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAGGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGAAGG---AT------TCAAACCTG-----TCTCTTCTCC-CAGG-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398352 280 - 91754291 tccctagtgccaagaa------cagtacctggcacatgccg---ggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAGGTAGCTTGGACAAAAATAATT----CGCTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACGGAGCTACGTACCGTGGAGG---AT------TCAAACCTG-----TCTCTTCTCC-CAGG-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555681 280 - 1977891 tccctagtgccaagaa------cagtacctggcacatgccg---ggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGTGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAGGTAGCTTGGACAAAAATAATT----CTCTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGAAGG---AG------TCAAACCTG-----TCTCTTCTCC-CAGG-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434520 280 + 7796314 tccctagtgccaagaa------cagtacctggcacataccg---ggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACGAGGAGACAACGCTGAC-ATTGCTGTGAGCACGGGGA----------GTGTGAGCGTTTGACGGA-TCCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTCAGACAAAAATAATT----CACTCAT-------------------------------------------------------------------------------------CTT----GGCAAATATGTTGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGGAGG---AT------TCAAACCTG-----TCTCTTCTCC-CAGG-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 915603 278 - 74750902 accctcgtgcccagaa------tggcacctggcacatatca---ggggctcagg--------------------------aaacatt------------------------------------------------tgttggatgaatgaaAG-AACAAGGAGACAACATTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAATGTTCGACTGG-TCCCTT-CATTTCTGGAGTAGGGCA-GAATGGGTTTCATAAAGTAGCTTGGACAAAAATAACC----CACTCAT-------------------------------------------------------------------------------------CTT----GGCACATCTGTTGAGTACCTGCCGCAGAAGAGAGACTGAGCTGTGTGCCATGGAGG---AT------TCAAATCTG-----TTTCTTCTCC-CAGG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 443882 261 + 17725628 accctagtgcccagaa------tggcacctggcacatatca---ggggctcagt--------------------------aaacatt------------------------------------------------cgttggatggatgaaAGAAACAATGAGACAACATTGAC-ATTGCTGTGAGCACAGGGG----------GTGTGAATG--------------------TTCTGGAGTAGGGCA-GAAGGGGTTTCATAAAGTAGCTTGGACAGAAATAATC----CACTCAT-------------------------------------------------------------------------------------CTT----GGCACGTCTGTTGAGTGCCTGCCGCAGAAGAGAGACTGAGCTGTGTGCCTCGGAGG---AT------TCAAATCTG-----TTTCTTCTGC-CAGG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 406657 277 - 6778120 accctagtgcccagaa------tggtacctggcacatatca---ggggatcagt--------------------------aaacatt------------------------------------------------cgttggatgaatgaaAGAAAGAAGGAGACAA-ATTGAC-ATTGCTGGGAGCAAGGGGG----------GTGTGGACGTTCAACTGA-TCCCTT-CGTTTCTGGAGTCGGGCA-GAATGGGTTTCATAAAGTAGCTTGGATAAAAATAATC----CACTCAT-------------------------------------------------------------------------------------CTT----GGGACATCTGTTGAGTACCTGCCGCAGAAGAGAGACTGAGCTACGTGTCAT-GAGG---AT------TCAAATCTG-----TTTCTTCTGC-CAGG-- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25890344 285 - 114275543 tccctaggactgagaa------cagtgcctggcacatacaa---ggtgctcagt--------------------------gactatt------------------------------------------------tgttaaatgaatgaaGGAAACAATAAAACTACGTTGAT-ATTACTCTGAATAAGGGGA----------GTGTGAATATTCAACTGACTCCCTTCTATTTCCAGAGTGGGGCA-GAATGAGTTTCATAAAGTAGGTTGGATAAAAATAAGTCAAACATTCAT-------------------------------------------------------------------------------------CCT----GGCATATTTGCTGAGCTCCTACCACAGAAGACAGACTATGCTATCTGCCATGGAGG---GT------TCAAAGATG-----TCTCTTCCCA-CCGG-- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7408207 285 + 22200726 tccctagggctgagaa------cagtgcctggcacataaaa---ggtgctcagt--------------------------gactatt------------------------------------------------tgttaaatgaatgaaGGAAACAATGGAACGATGCTGAT-CGTGCTCTGAATAAGGGGA----------GTGTGAATATTCGACTGACTTCCTTCTATTTCCAGAGTAGGGCA-GAATGAGTTTCATAAAGTAGGTTGGATAAAAATAATTCAAACATCCAT-------------------------------------------------------------------------------------CCT----GGCatatttgctgagctcctgccacagaagagagactacgctatgtgccgtggagg---gt------tcaaagatg-----tctcttccca-ctgg-- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 402864 287 - 608964 tctccagtgctgagaa------tagtgtctggcatataaag---ggtactcggt--------------------------gaatatt--------------------------------------------------ttaaatgaatgaaGAAAATAATGAAACAATGTTGAT-ATTTCTCTGAATAAGGCGG----------GTAAGAATATTCAACTGTTTCCCTTCTATTTCCAGAGAGGGGAA-GAATGAGTTTTATAAAGTAGGTTGGATAAAAATAACTCAAACATTCCT-------------------------------------------------------------------------------------CCT----GACATACTCGCTGGGCACCCACCCCAG-AGAGAGGCTGTGCCCTGTGCCGTGTGGG---GTGGGAACTCCAAGATG-----TCTCTTCCTG--TAA-- i otoGar3.GL873829 I 18 C 0 s mm10.chr16 65423721 458 - 98207768 TCCCTAGCTCCTTGCACATAGTCAGTACTTTGTGTgttgtggttgtagctcagtcttggagcaatttctcagcaggaacaaaacactggttttaattcccggcattgaaataaTGACCAAGCTGCTCCATGAGTATGTTAAGTAGTTAATAAAAACAAC-AGATGGCTCTGTG-GTTGCTCTGAATAAGGGGGGGGGGTGTTTGTGTGTGCTCTCAGCTGACGTCCTTGTGTTCTCGGTGTGGGGCAGGAATGAGCTTCATAGAGTGGTT-----GCAAATGATTCAAACTCTTATGATGGTGTGTTTGGTGTGGTATTTGgtgtgtgtgtttggtgtgtgtgtttggtgtggtatttggtgtgtgtgtttggtgtgtgtgtTT----GGTGTGGTTGGTGAGTGCCTTAAACAGAAGAGAGACCATGCTGTATGCTGAAGAAC---AT------TCAAAGATG-----TCTcaggtcc-tggg-- i mm10.chr16 C 0 I 927 s canFam3.chr33 29057383 284 + 31377067 -ccctagcgtcccgca------cagtgcctgccgcatgaaa---ggtgctcggt--------------------------aaatatt------------------------------------------------agttaaatgagtggaGGAAACC---AGACAACTTCGACTATTGCTGTGCATAAGGGCA----------GTACGTGTATTCAGCTGATCCCCTCCCCCTTGCATGATGAGGCA-GGGTGAGGTTTATAAAGTAGGTTGGACAAAAATAATT----CAATCAT-------------------------------------------------------------------------------------CCTTCCCAGCATTTTTGCCAGGC-CCTGCAACAGAAGAGAGGC-ATGGTGTGTGCCATGGGGGGTTAT------TCGCTGATG-----TCTCTTCCCCACAGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3881017 275 + 6579706 tccctagtccctagaa------cagtgcctggcacccaaaa---ggtgctcaat--------------------------aaatgtt------------------------------------------------tgtcatatgactggaGAAAGCTACAAAACAACTTGGGC-TT---------------GG----------CTCTGAATATTCGCCTGACCCCCTTCCTCTCACAGAGTGGGGCA-GAATGACTTTGACAAAGGCGGCTGGACAGAAATCATCCACACGTTCTT-------------------------------------------------------------------------------------CAC----GGCACGTTTGCTGACCACTTGTGGTGTGAGAGGGACTATG-TATGTG-CGTGGGGG---AT------TCAGGACTGAGACACAGCTTTCCC-TAGAGG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=146396.000000 s hg38.chr3_KI270779v1_alt 106600 12 + 205312 GAT-----T-------GAAGTTAG s panTro5.chr3 200090224 12 + 202621043 GAT-----T-------GAAGTTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69814 12 + 190779 GAT-----T-------GAAGTTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34717 12 + 106623 GAT-----T-------GAAGTTAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842858 12 + 123690457 GAT-----T-------GAAGTTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443118 12 + 204787373 GAT-----C-------GAAGTTAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50946 12 + 192460366 GAT-----C-------GAAGTTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526537 12 + 19675229 GAT-----C-------GAAGTTAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 462278 12 + 16847902 GAT-----T-------GAAGTTAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398632 12 - 91754291 GAT-----T-------GAAGTTAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555961 12 - 1977891 GAT-----T-------GAAGTTAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434800 12 + 7796314 GAT-----T-------GAAGTTAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 915881 12 - 74750902 GAT-----T-------AAAGTTAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444143 12 + 17725628 GAT-----T-------AGAGTTAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 406934 17 - 6778120 GATGTACAG-------AAAGTTAG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25890629 12 - 114275543 GAT-----T-------AAAGTTAC i micMur3.chr1 C 0 I 13 s proCoq1.NW_012133858v1 7408492 12 + 22200726 gat-----t-------aaagttag i proCoq1.NW_012133858v1 C 0 I 1083 s otoGar3.GL873829 403151 12 - 608964 GAT-----T-------AGAGTTAG i otoGar3.GL873829 C 0 I 13 s canFam3.chr33 29057667 12 + 31377067 GGC-----T-------AAACTTAG i canFam3.chr33 C 0 I 13 s dasNov3.JH569502 3881292 19 + 6579706 GAT-----TAGTAGGGGGGGTTGG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=1613596.000000 s hg38.chr3_KI270779v1_alt 106612 160 + 205312 ACACGTACAG-CAATAATAAGTtgaaagaacttatttacaccgca-tatagcaacaacaggatgcccttaatatatagagaactctta--------------------------------------cagcgcaag--------aaaataaaaaggcaaacataccagtagaaaa--------------------------------------------atgggtaa-----------------------------------------------------atggcaa----------------caggtaattcacaaaagaa s panTro5.chr3 200090236 160 + 202621043 ACACTTACAG-CAATAATAAGTtgaaagaacttatttacactgca-tatagcaacaacaggatgcccttaatatatagagaactctta--------------------------------------cagcgcaag--------aaaataaaaaggcaaacataccagtagaaaa--------------------------------------------atgggtaa-----------------------------------------------------atggcaa----------------caggtaattcacaaaagaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69826 160 + 190779 ACACGTACAG-CAATAATAAGTtgaaagaacttatttacactgca-tatagcaacaacaggatgcccttaatatatagagaactctta--------------------------------------cagcgcaag--------aaaataaaaaggcaaacataccagtagaaaa--------------------------------------------atgggtaa-----------------------------------------------------atggcaa----------------caggtaattcacaaaagaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34729 160 + 106623 ACACGTACAG-CAATAATAAGTtgaaagaacttatttacaccgca-tatagcaacaacaggatgcccttaatacatagagaactctta--------------------------------------cagcgcaag--------aaaataaaaaggcaaacataccagtaggaaa--------------------------------------------atgggtaa-----------------------------------------------------atggtaa----------------caggtaattcacaaaggaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120842870 159 + 123690457 ACATGTACAG-CAATAATAAGTtgaaagaacttatttacaccgca-catagcgacaacaggatgcccttaatatacagagaactctta--------------------------------------cagagcaag--------aaaa-aaaaaggcaaacacaccagtagaaaa--------------------------------------------atggataa-----------------------------------------------------atggcaa----------------caggtaattcacaaaagaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443130 164 + 204787373 ACATGTACAG-AAATAataaattgaaagaacttatttataccgca-tatagcaacaacaggatgcacttaa-atatagagaactctta--------------------------------------cagagcaag---aaaaaaaaaaaaaaaggcgaacacaccagtagaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------caggtagttcacaaaaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 50958 164 + 192460366 ACATGTACAG-AAATAataaattgaaagaacttatttataccgca-tatagcaacaacaggatgcacttaa-atatagagaactctta--------------------------------------cagagcaag---aaaaaaaaaaaaaaaggcgaacacaccagtagaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------caggtagttcacaaaagaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526549 162 + 19675229 ACATGTACAG-AAATAataaattgaaagaacttatttataccgca-tatagcaacaacaggatgcacttaa-atatagagaactctta--------------------------------------cagagcaag-----aaaaaaaaaaaaaggcgaacacaccagtagaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------caggtagttcacaaaagaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 462290 161 + 16847902 ACATGTACAG-AAATAataaattgaaagaacttatttataccgca-tatagcaacaacgggatgcacttaa-atatagagaactctta--------------------------------------cagagtaag------aaaaaaaaaaaaggcaaacacaccagtggaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------caggtaattcacaaaagaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398644 167 - 91754291 ACATGTACAG-AAATAATAAATTGAAAGAACTTATTTATACCGCA-TATAGCAACAACGGGATGCActtaa-atatagagaactctta--------------------------------------cagagtaagaaaaaaaaaaaaaaaaaaggcaaaaacaccagtggaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------caggtaattcacaaaagga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 555973 162 - 1977891 ACATGTACAG-AAATAataaattgaaagaacttatttataccgca-tatagcaacaacgggatgcacttaa-atatagagaactctta--------------------------------------cagagtaag-----aaaaaaaaaaaaaggcaaacacaccagtggaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------caggtaattcacaaaagaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434812 163 + 7796314 ACATGTACAG-AAATAataaattgaaagagcttatttataccgca-tatagcaacaacaggatgcacttaa-atatagagaactctta--------------------------------------cagagcaag----aaaaaaaaaaaaaaggcgaacacaccagtagaaaa--------------------------------------------atggataa-----------------------------------------------------agggcaa----------------cagctaattcacaaaagaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 915893 192 - 74750902 AC--GTGCAG-AAATAACAAACTGAAAG---TGACTTACACCTCA-CAGAGCAACAACAGGATGCCTTTAATATACAGAGAACTCTTAGAGCAACAACAGGatgcctttactatacagagaactcttagagagca---------gggaaaaaaggcagacacaccagcagaaaa--------------------------------------------atgaataa-----------------------------------------------------attgcag----------------caggcagttcacaaaagaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444155 157 + 17725628 ACATGTACAG-AAATGACAAACTGAAAG---TTACTTACACCGCATTATAGCAGCAACAGGTTGCctttaatatatagagaactctta--------------------------------------cagagcaag---------ggaagaaaaggcagacacaccagcagaaaa--------------------------------------------atggataa-----------------------------------------------------acagcag----------------caggcaattcacaaaagaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 406951 156 - 6778120 ACATGTACAG-AAATAACAAATTGAaag---ttacttacaccgca-tatagcaacaacaggatgccttcaatatacagagaactctta--------------------------------------cagagcaag---------gaaagaaaaggcagacacaccagcagaaaa--------------------------------------------atggataa-----------------------------------------------------atagcag----------------caggcgattcacaaaagaa i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25890654 155 - 114275543 ACATCTACAG-AAATAacaaaccgaaagaacttatgtacactaca-tatatcaaaaacagaatgcccttaacatatagagaactctta--------------------------------------taaagcaat-------------aaaaagacaaacataccagtagcaaa--------------------------------------------aaaaacag-----------------------------------------------------aaggcta----------------caggtaattcacaaaagaa i micMur3.chr1 I 13 I 381 s otoGar3.GL873829 403176 155 - 608964 ACGTCTACAG-AAATAacaaactgaaagagcttatttacactaca-tacagcaaaaacagaatgcccttaacacacagagaactctta--------------------------------------ctaggcaat-------------aaaaagacaaacacaccagcagagaa--------------------------------------------atggacag-----------------------------------------------------aaggcaa----------------taagcaattcacaaaagga i otoGar3.GL873829 I 13 C 0 s canFam3.chr33 29057692 269 + 31377067 ACATATACAGAaaaaaacaaaccaaaagaacttatttacaccata-tatggcaaaaccagaatctccttaatatacaaagagttctta--------------------------------------caaagcaat-------------aaaaagggaaatatgccagaggaaagtaggactataaatgttttccaaaagcaggaatataTCTTCCTTTTTGGGTAAGAGCTGTGTTCAGATGAACCCCACACCACAGATTTgagaaataaaagatgtgcaaggcaaaaaaacaaaacaaaacaaaacaaaacacaaaagca i canFam3.chr33 I 13 C 0 s dasNov3.JH569502 3881311 152 + 6579706 AGGTGTGCAG-AAACAGCAACCtgaaagaacgtattcacaccaca-tctgacaa-aaccgtaagtccttaatacacagagagtt-tta--------------------------------------caaggcaat-----------------agacaaatacaccagcagaaaa--------------------------------------------attaacaa-----------------------------------------------------atagcaagga-------------caggcaattcacaaaagta i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=2341859.000000 s hg38.chr3_KI270779v1_alt 106772 258 + 205312 gaaatacaaatgtcctctcctcccgccacca----ccc-----ccc--atgaaaaagaac-gtgtgacttcagta-gcaaaaacag-------gtcca-ttaatacagtgagatattgcttattgt----------------------------------atgtc------------------------t----gtactgatctatac--------------------t-----gggtgctgggcaaacgggcattcttaaacactcctagtagggaag-aaattggtacaacctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacctttaactcagcagtttcgtt s panTro5.chr3 200090396 258 + 202621043 gaaatacaaatgtcctctcctcccgccacca----ccc-----ccc--atgaaaaagaac-gtgtgacttcagta-gcaaaaacag-------gtcca-ttaatacagtgagatattgcttattgt----------------------------------atgtc------------------------t----gtactgatctatac--------------------t-----gggtgctgggcaaatgggcattcttaaacactcctagtagggaag-aaattggtacaatctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacctttaactcagcagtttcgtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 69986 258 + 190779 gaaatacaaatgtcctctcctcccgccacca----ccc-----ccc--atgaaaaagaat-gtgtgacttcagta-gcaaaaacag-------gtcca-ttaatacagtgagatattgcttattgt----------------------------------atgtc------------------------t----gtactgatctatac--------------------t-----gggtgctgggcaaatgggcattcttaaacactcctagtagggaag-aaattggtacaatctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacctttaactcagcagtttcgtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 34889 249 + 106623 g------aaatgtcctctcctcccgccaccg----ccc-----ccc--atgaaaaagaac-gtgtgacttcagta-gcaaaaacag-------gtcca-ttaatacagtgagatattgcttattgt----------------------------------atgtc------------------------t----gtactgatctatac--------------------t-----gggtgctgggcaaacgggcattcttaaacactcctagtcgggaag-aaattggtac---ctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacctttaactcagcagtttcgtt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843029 258 + 123690457 gaaatacaaatgtcctctcctcccaccacca----ccc-----ccc--atgaaaaagaac-gtgtgacttcagta-gcaaaaacag-------gccca-ttaatacagtgagatattgcttattgt----------------------------------atgtc------------------------t----gtactgatctatgc--------------------t-----gggcgctgggcaaatgggcattcttaaacactcctagtaggaaag-aaattggtacagcctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacttttaactcagcagtttcgtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443294 259 + 204787373 gaaatacaaatgtcctctcctcccaccacca----ccc-----ccgcaatgaaaaagaac-gtgtgatttcacta-acaaaaacag-------gtcca-ttaatacagtgagaaattgcttgttgc----------------------------------atgtc------------------------t----gtactgatccgtac--------------------t-----gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaag-aaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtacaca-ctttaactcagcagtttcgtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51122 259 + 192460366 gaaatacaaatgtccTCTCCTCCCACCACCA----CCC-----CCGCAATGAAAAAGAAC-GTGTGATTTCACTA-ACAAAAACAG-------GTCCA-TTAATACAGTGAGAAATTGCTTGTTGC----------------------------------ATGTC------------------------T----GTACTGATCCGTAC--------------------T-----gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaag-aaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtacaca-ctttaactcagcagtttcgtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526711 259 + 19675229 gaaatacaaatgtcctctcctcccaccacca----ccc-----ccgcaatgaaaaagaac-gtgtgatttcacta-acaaaaacag-------gtcca-ttaatacagtgagaaattgcttgttgc----------------------------------atgtc------------------------t----gtactgatccgtac--------------------t-----gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaag-aaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtacaca-ctttaactcagcagtttcgtg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 462451 264 + 16847902 gaaatacaaatgtcctctcctcccgccactg----ccccccctccccagtgaaaaagaac-gtgtgatttcacta-acaaaaacag-------gtcca-ttaatacagtgagaaattgcttattgt----------------------------------atgtc------------------------t----gtactgatccgtac--------------------c-----gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaag-aaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtaccta-ctttaactcagcagttttgtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 398811 259 - 91754291 aaggggcaaatgtccTCTCCTCCCGCCACCA----CCC-----CCCCAGTGAAAAAGAAC-GTGTGATTTCACTA-ACAAAAACAG-------GTCCA-TTAATACAGTGAGAAATTGCTTGTTGC----------------------------------TTGTC------------------------T----GTACTGATCCGTAC--------------------T-----gggtgctgggcaaacgggcattctcaaacactcctaggaggaaag-aaattggcacagcctctctggaggacaatttaaccgatttatttaaagcctgaaaaatgtacata-ctttaactcagcagtttcgtg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556135 263 - 1977891 gaaatacaaatgtcctctcctcccgccaccgccccccc-----ccccagtgaaaaagaac-gtgtgatttcacta-acaaaaacag-------gtcca-ttaatacagtgagaaattgcttattgt----------------------------------atgtc------------------------t----gtactgatccgtac--------------------t-----gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaag-aaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtaccta-ctttaactcagcagtttcatg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 434975 260 + 7796314 gaaatacaaatgtcctctcttcccgccaccg----ccc-----ccccagtgaaaaagaac-gtgtgacttcacta-acaaaaacag-------gtcca-ttaatacagtgagaaactgcttattgt----------------------------------atgtc------------------------t----gtactgatctgtac--------------------t-----gggtgctgggcaaacgggcattctcaaacactcctaggaggaaag-aaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaagactgtacatacctttaactcagcagtttcgtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916085 256 - 74750902 gaaacacaagcgtcctctcctcccgccacca----ccc-----cacc-gtgagaaagaag-gtttgacttc---a-gcagaaacag-------gtcaa-ttaatacagtgagatagtgcttaccgt----------------------------------gcgtc------------------------tc---gtaccgatctatgc--------------------t-----gggtgctgggcgaaggggca-tctcagacactcctagtgggaatg-aaattggtgcagcctttctggaggacaatttaactcattcatttaaagcctgaaaaatgtacatacctttaattcagcagtttcatt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444312 255 + 17725628 gaaatacaagcatcctctcctcctgccacca----ccc-----cacc-atgagaaagaac-gtttgacttc---a-gcagaaacag-------gtcag-ggaatacagtgagacagtgcttactgt----------------------------------gtgtc------------------------tc---gtgccgatcca-gc--------------------t-----gggtgctgggcgaaggggca-tctcaaacatgcctagtaggaagg-aaattggtgcagcctttctggaggacaatttaactgatttatttaaagcccgacaaatatacatacctttaattccgaagtttcatt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407107 252 - 6778120 aaaatacaagcgtcctctcctcccg---cca----ccc-----cacc-atgaggaagaat-gtttgacttc---a-gcagaaacag-------gtcaa-ttaatgcagtgagagagtgcttactgt----------------------------------gcgtc------------------------tc---gtactgatcca-gc--------------------t-----gggtgctgggcaaaggggca-tctcaaacactcctagtaggaatg-aaattggtgcagcctttctggaggacaatttaactgacttatttaaagcctgaaaaatgtacatacctttaattcagcagtctcatt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 403331 282 - 608964 aacagaaaattgtcctccc----------------ccg-----tcacaatgaaaaagaaa-gcttaacttcacta-gcaaaaaaaa-------gataacccaatatagcaagataatacttattgtgtgtgtcaataggtaaagatttataaaaattataatgtc------------------------t----gtactgatctgtat--------------------g-----gggtgctgggggaaagggcattcttaaatactcctagtgtgaatg-aaattgatatagtcttactggaggacaatttgact-atgtctctaaagccttaaaaatgtgcctatctctaagccagcaattttgtt i otoGar3.GL873829 C 0 I 276 s canFam3.chr33 29057961 250 + 31377067 ggaatataaatgttt--------------------tcc----------atgaaaaagaaa---------ccagtaggaaaaaaaaa-------gtaaa-ttgatacagtgaggtatt-ctaactat----------------------------------gtgcc------------------------aataggtaaggacttataaaaattataatttccatgatga-----gggtgtggagggaaaggatagtcttaaacactgttggtgtgaatg-aaatcggcacagcctttcgggaggaccatttgact-----atctaaagacttaaaaatgtgcatccctttaactgagcaatttcatt i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3881463 272 + 6579706 ggaatacaaattccc-------------ccg----ccc----------atgaaaaaagatagtttgctttcatca-gcaaaaacaaaaaaaatgtaag-ttaataaagtgagatatcacttatttc----------------------------------atgtcagatagctaaagattttttaaaatt----ataacattctgtac--------------------tgatgagggtgttgggagaa-gggcacccttaaacactgctagtgtgaatgtaaattggtaccacctttctggaagacaattt--ttgat--atctaaaaccttacaagtgagcattcttttaaccaagtagtcct--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=360233.000000 s hg38.chr3_KI270779v1_alt 107030 40 + 205312 actgatttatcttaaggaagtaatTTAGAATCTGTGCCTA--------------------------- s panTro5.chr3 200090654 40 + 202621043 actgatttatcttaaggaagtaatTTAGAATCTGTGCCTA--------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70244 40 + 190779 actgatttatcttaaggaagtaatTTAGAATCTGTGCCTA--------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35138 40 + 106623 actgatttatcttaaggaagtaatTTAGAATCTGTGCCTA--------------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843287 36 + 123690457 actgatttatc-taaggaagtaattaagaatctgtgc------------------------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443553 40 + 204787373 actgatttatcttaaggaagtaattaagaatCCCTGCCTA--------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51381 40 + 192460366 actgatttatcttaaggaagtaattaagaatCCGTGCCTA--------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 526970 40 + 19675229 actgatttatcttaaggaagtaattaagaatCCGTGCCTA--------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 462715 40 + 16847902 actgatttatcttaaggaagtaattaagaatctgtgcCTA--------------------------- i cerAty1.NW_012004056v1 C 0 I 342 s chlSab2.chr15 399070 40 - 91754291 actgatttatcttaaggaagtaattaagaatctgtgcCTA--------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556398 40 - 1977891 actgatttatcttaaggaagtaattaagaatctgtgccta--------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435235 40 + 7796314 actgatttatcttaaggaagtaattaagaatctgtgcCTA--------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916341 36 - 74750902 agtggtttaccttaagg-aataattaAGCATCTGTGC------------------------------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444567 37 + 17725628 actggtttaccttaaggaaataattaataatctgtgc------------------------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407359 37 - 6778120 actggtttaccttaaggaaataattaataatctgtgc------------------------------ i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 403889 38 - 608964 CCTGGTTTATCCTAAAGAAATAGTTAAGAGTCTACAGA----------------------------- i otoGar3.GL873829 I 276 C 0 s canFam3.chr33 29058214 40 + 31377067 aagggtttatcttaaagaaataattaggaatctgtgcaaa--------------------------- i canFam3.chr33 I 3 I 29 s dasNov3.JH569502 3881735 67 + 6579706 agaaatataccttaaggcaataactaaggatctgtgcaaagaccaatataaacacattcattgtaga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=22155.000000 s hg38.chr3_KI270779v1_alt 107070 3 + 205312 ACT s panTro5.chr3 200090694 3 + 202621043 ACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70284 3 + 190779 ACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35178 3 + 106623 ACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843323 2 + 123690457 -CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443593 3 + 204787373 ATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51421 3 + 192460366 ATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527010 3 + 19675229 ATT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 399110 3 - 91754291 ATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556438 3 - 1977891 att i manLeu1.NW_012102020v1 C 0 I 34 s colAng1.NW_012118932v1 435275 3 + 7796314 ATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916377 2 - 74750902 -CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444604 2 + 17725628 -CT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407396 2 - 6778120 -CT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 403927 3 - 608964 ATT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29058283 3 + 31377067 act i canFam3.chr33 I 29 C 0 s dasNov3.JH569502 3881802 3 + 6579706 act i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cerAty1.NW_012004056v1 462755 342 + 16847902 I a score=115744.000000 s hg38.chr3_KI270779v1_alt 107073 15 + 205312 GTTTACAATAACTCA s panTro5.chr3 200090697 15 + 202621043 GTTTACAATAACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70287 15 + 190779 GTTTACAATAACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35181 15 + 106623 GTTTACAATAACTCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843325 15 + 123690457 GTTTATAACAACTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443596 14 + 204787373 -TTTATAACAACTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51424 14 + 192460366 -TTTATAACAACTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527013 14 + 19675229 -TTTATAACAACTAA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 399113 14 - 91754291 -TTTATAACAACTAA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 435278 14 + 7796314 -TTTATAACAACTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916379 15 - 74750902 GTTTATAACAACCAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444606 15 + 17725628 GTTTATAACAACCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407398 15 - 6778120 GTTTATAACAACCAA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 403930 15 - 608964 GTTTATAACACCCAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29058286 15 + 31377067 gtttataacagctaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3881805 15 + 6579706 acttataacaacaac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e manLeu1.NW_012102020v1 556441 34 - 1977891 I e cerAty1.NW_012004056v1 462755 342 + 16847902 I a score=604698.000000 s hg38.chr3_KI270779v1_alt 107088 64 + 205312 TAGATGAAAAAGGCAAAACAAAACACAAGTAACCTCAAATCTCCCCATGTAACAGTTTGCTTAA s panTro5.chr3 200090712 64 + 202621043 TAGATGAAAAAGGCAAAACAAAACACAAGTAACCTCAAATCTTCCCATGTAACAGTTTGCTTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70302 64 + 190779 TAGATGAAAAAGGCAAAACAAAACACAAGTAACCTCAAATCTTCCCATGTAACAGTTTGCTTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35196 64 + 106623 TAGATGAAAAAGGCAAAACAAAACACAAGTAACCTCAAATCTCCCCATGTAACAGTTTGCTTAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843340 64 + 123690457 TAGATGAAAAAGACATAACAAAACACAAATAACCTCAAATCTCCCCAAGTAACAGTTTGCTTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443610 64 + 204787373 TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCTATGTAACAGTTTGCTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51438 64 + 192460366 TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCTATGTAACAGTTTGCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527027 64 + 19675229 TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCTATGTAACAGTTTGCTTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463097 64 + 16847902 TAGATGAAAAAGACAAAAGGAAACACAAATAACCTAAAATCTCCCCATGTAACAGTTTGCTTAA i cerAty1.NW_012004056v1 I 342 C 0 s chlSab2.chr15 399127 64 - 91754291 TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCCATGTAACAGTTTGCTTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556475 64 - 1977891 tagatgaaaaagacaaaatgaaacacaaataacctaaaatctccccatgtaacagtttgcttaa i manLeu1.NW_012102020v1 I 34 C 0 s colAng1.NW_012118932v1 435292 64 + 7796314 TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCCATGTCACAGTTTGCTTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916394 63 - 74750902 TAGATGAAAAAGACAAAACGAAACACAAATAACCTAAAAT-CTCCCGCGTGACACTTTGGTTAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444621 64 + 17725628 TAGATGAAAAAGACAAAATGAAACACAGTTCACCTAAAATCCCCCCATATAACACTTTGGTTAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407413 64 - 6778120 TAGATGAAAAAGACAAGACGAAACACAAATGACCTAAAATCTCCCCACGTAACACTTTGGTTAA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 403945 52 - 608964 TAAAAGAAAAAG------------ACAAATAACTTAAGATATCCCAATGTAATCATTTGGTTAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29058301 49 + 31377067 taaaggaaaaa----agacaaaaca-----------aaatgtcTCAGTGTAGTCATTTGGTTAA i canFam3.chr33 C 0 I 37 s dasNov3.JH569502 3881820 58 + 6579706 taaataaggaaga------aatacagaaattacctgagatatcccaacatagcagtttgattaa i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=782885.000000 s hg38.chr3_KI270779v1_alt 107152 89 + 205312 ACACTATAGCGTTATTTTACGCAAGCTACAGAAGCATTGTTGAAACATATATTTATTAGGACAGAAAAAAATTCATGAAATGTTATTTT s panTro5.chr3 200090776 89 + 202621043 ACACTATAGTGTTATTTTACGCAAGCTACAGAAGCATTGTTGAAACATATATTTATTAGGACAGAAAAAAGTTCATGAAATGTTATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70366 89 + 190779 ACACTATAGTGTTATTTTACGCAAGCTACAGAAGCATTGTTGAAACATATATTTATTAGGACAGAAAAAAGTTCATGAAATGTTATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35260 89 + 106623 ACACTATAGTGTTATTTTACGCAAGCTACAGAAGCATTGTTGAAACATATATTTATTAGGACAGAAAAAAGTTCATGAAATGTTATTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843404 89 + 123690457 ACACTGTAGTGTTATTTTACGCAAGCTACAGAAGCGTTGTTGAAACATATATTTATTAGGATGGAAAAAAGTTCATGAAatattatttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443674 85 + 204787373 ACATTATAGTGTTATTTTTTGCGAGCTACAGAAGCGTTGTTGAAACATG----TATTAAGATGGAAAAAAGTTCATGAAATATTATTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51502 85 + 192460366 ACACTATAGTGTTATTTTTTGCAAGCTACAGAAGCGTTGTTGAAACATG----TATTAAGATGGAAAAAAGTTCATGAAATATTATTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527091 85 + 19675229 ACACTATAGTGTTATTTTTTGCAAGCTACAGAAGCGTTGTTGAAACATG----TATTAAGATGGAAAAAAGTTCATGAAATACTATTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463161 89 + 16847902 ACACTATAGTGTTATTTTTTGTAAGCTACAGAAGCGTTGTTGAAACATGTATTTATTAAGATGGAAAAAAGTTCATGAAATATTATTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399191 89 - 91754291 ACACTATAGTGTTATTTTTTGTAAGCTACAGAAGCGTTGTTTAAACATGTATTTATTAAGATGGAAAAAAGTTCATGAAATATTATTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556539 89 - 1977891 acactatagtgttattttttgtaagctacagaagcgttgttgaaacatgtatttattaagatggaaaaaagttcatggaatattattTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435356 89 + 7796314 ACACTATAGTATTATTTTTTGCAAGCTACAGAAGAGTTGTTGAAACATGTATTTATTAAGATGGAAAAAAGTGCATGAAATATTATTTT i colAng1.NW_012118932v1 C 0 I 327 s calJac3.chr17 916457 85 - 74750902 ACATTGTAGTGTTACTTTGCATAATC--TAGAAGTTTTGTTGAAACGTA--TTTATTAAGATGGAGAGAAGTTCATGAAATATTATTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444685 86 + 17725628 ACA-TACAGTGTTATTTTACGCAGTCTATAGAAGTCGTGTGGAAACGTG--TCTATTAAGATGGAAAGAAGTTCATGAAATGTTATTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407477 86 - 6778120 ACA-TATAGTGTTATTTTACACAGTCTATAGAAGTCGTGTTGAAATGTG--TTTATTAAGATGGAAAGAAGTTCATGAAATATTATTTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 403997 86 - 608964 A---TATAGTGTTATTTTATATAAACCATGGAAGTGTTATTAAGATATATATTTATAAAGATGGAAAGAAGTTTATGAAATATTGTTTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3881878 84 + 6579706 ---atatactgttgttttat--agactgtagaagtattgttgagaagcatatttattaacatggaaagaggttcatggaatattTTGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29058350 37 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=150464.000000 s hg38.chr3_KI270779v1_alt 107241 27 + 205312 ATCT--TCTT-TTTTCTTAAAATGG------AACT-T s panTro5.chr3 200090865 29 + 202621043 ATCTTCTCTT-TTTTCTTAAAATGG------AACT-T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70455 29 + 190779 ATCTTCTCTT-TTTTCTTAAAATGG------AACT-T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35349 29 + 106623 ATCTTCCCTT-TTTTCTTAAAATGG------AACT-T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843493 30 + 123690457 atcttctcttattttcttaAAATCA------AACT-T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443759 29 + 204787373 ATCTTCTCTTATTTTCTAAAAGTGG------AACT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51587 29 + 192460366 ATCTTCTCTTATTTTCTAAAAGTGG------AACT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527176 29 + 19675229 ATCTTCTCTTATTTTCTAAAAGTGG------AACT-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463250 30 + 16847902 AGCTTCTCTTATTTTCTAAAAATGG------AACTA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399280 29 - 91754291 ATCTTCTCTTATTTTCTAAAAATGG------AACT-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556628 29 - 1977891 ATCTTCTCTTATTTTCTAAAAATGG------AACT-- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 916542 30 - 74750902 ATCTTCTCTTATTTTCTTAAAACGG------AACT-T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444771 30 + 17725628 ATCTTCTCTTATTTTCTTAAAATGG------AACT-T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407563 25 - 6778120 A-----TCTTATTTTCTTAAAATGG------AACT-T i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 404083 36 - 608964 GTCTTCTCATTTTTTAAAAAAATAGTTTCCAATCT-T i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 3881962 20 + 6579706 -----CTCTCATTCTTAAAAAGATG------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29058350 37 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 435445 327 + 7796314 I a score=50985.000000 s hg38.chr3_KI270779v1_alt 107268 16 + 205312 AAAAAAA--ATTTTTT-------------------------------------------------------------------TA s panTro5.chr3 200090894 16 + 202621043 AAAAAAA--TTTTTTT-------------------------------------------------------------------TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70484 16 + 190779 AAAAAAA--TTTTTTT-------------------------------------------------------------------TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35378 17 + 106623 AAAAAAA-TTTTTTTT-------------------------------------------------------------------TA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843523 15 + 123690457 TAAAAT---TTTTTTT-------------------------------------------------------------------TA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443788 16 + 204787373 AAAAAAA--ATTTTTT-------------------------------------------------------------------TA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51616 16 + 192460366 AAAAAAA--ATTTTTT-------------------------------------------------------------------TA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527205 16 + 19675229 AAAAAAA--TTTTTTT-------------------------------------------------------------------TA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463280 16 + 16847902 AAAAAAA--ATTTTTT-------------------------------------------------------------------TA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399309 18 - 91754291 AAAAAAATTTTTTTTT-------------------------------------------------------------------TA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556657 17 - 1977891 AAAAAAA-ATTTTTTT-------------------------------------------------------------------TA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435772 16 + 7796314 AAAAAAA--TTTTTTT-------------------------------------------------------------------TA i colAng1.NW_012118932v1 I 327 C 0 s calJac3.chr17 916572 13 - 74750902 ---AACA--TTTTTTT-------------------------------------------------------------------AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444801 12 + 17725628 ---AA-A--TGTTTTT-------------------------------------------------------------------AA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407588 13 - 6778120 ---AAAA--ATTTTTT-------------------------------------------------------------------AA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 404120 83 - 608964 TAAAAAA--tttttttatttttttgatacagagtctcactcttttgtccaggctagagtgtaatagcatcagcctcactcacaca i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3881982 14 + 6579706 -AAACAG--TCTTTTT-------------------------------------------------------------------C- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29058350 37 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=56849.000000 s hg38.chr3_KI270779v1_alt 107284 10 + 205312 ACTCCAACCT s panTro5.chr3 200090910 10 + 202621043 ACTCCAACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70500 10 + 190779 ACTCCAACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35395 10 + 106623 ACTCCAACCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843538 10 + 123690457 ACTCCAAGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443804 10 + 204787373 ACTCCAAGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51632 10 + 192460366 ACTCCAAGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527221 10 + 19675229 ACTCCAAGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463296 6 + 16847902 ACTCTA---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399327 6 - 91754291 ACTCTA---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556674 6 - 1977891 ACTCTA---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435788 10 + 7796314 ACTCCAAGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916585 10 - 74750902 ACTCCAAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444813 10 + 17725628 ACTCCAAGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407601 10 - 6778120 ACTCCAAGCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 404203 10 - 608964 acctcaaatt i otoGar3.GL873829 C 0 I 202 s canFam3.chr33 29058387 9 + 31377067 tTCCCAAGT- i canFam3.chr33 I 37 C 0 s dasNov3.JH569502 3881996 10 + 6579706 ATGCCAAACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=145910.000000 s hg38.chr3_KI270779v1_alt 107294 18 + 205312 ACCTT------------------------TTACACCATCTGC s panTro5.chr3 200090920 18 + 202621043 ACCTT------------------------TTACACCATCTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70510 18 + 190779 ACCTT------------------------TTACACCATCTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35405 18 + 106623 ACCTT------------------------TTACACCATCTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843548 18 + 123690457 ACCTT------------------------TTACACCATCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443814 17 + 204787373 ACCTT------------------------TTATACCATCT-C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51642 17 + 192460366 ACCTT------------------------TTATACCATCT-C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527231 17 + 19675229 ACCTT------------------------TTATACCATCT-C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463302 18 + 16847902 ACCTT------------------------TTATACCATCTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399333 18 - 91754291 ACCTT------------------------TTATACCATCTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556680 18 - 1977891 ACCTT------------------------TTATACCATCTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435798 18 + 7796314 ACCTT------------------------TTATACCATCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916595 18 - 74750902 GCCTT------------------------TTACACTATCTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444823 18 + 17725628 ACCTT------------------------TTACACTATGTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407611 18 - 6778120 ACCTT------------------------TTACACTATCTCT i cebCap1.NW_016107444v1 C 0 I 2 s otoGar3.GL873829 404415 42 - 608964 ACCTTTTTTGGTTTTCATTTCAGACTGCCTTTCACTATCTCT i otoGar3.GL873829 I 202 C 0 s canFam3.chr33 29058396 18 + 31377067 ACCTT------------------------TCACACTGTCTTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3882006 18 + 6579706 ACCCT------------------------TCCTATTGCTGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25890809 381 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=1348570.000000 s hg38.chr3_KI270779v1_alt 107312 118 + 205312 AGAG----CTTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCAGGATGGAATCCCCACCTTCGTATGCAAGGGTcttcatgatatggcctcagccaactatcttagctccaggt--c s panTro5.chr3 200090938 118 + 202621043 AGAG----CTTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCAGGATGGAATCCCCACCTTCGTATGCAAGGGTCTTCATGATATGGCCTCAGCCAACTATCTTAGCTCCAGGT--C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70528 118 + 190779 AGAG----CTTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCAGGATGGAATCCCCACCTTCGTATGCAAGGGTcttcatgatatggcctcagccaactatcttagctccaggt--c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35423 118 + 106623 AGAG----CTTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCAGGATGGAATCCCCACCTTTGTATGCAAGGGTCTTCATGATATGGCCTCAGCCAACTATCTTAGCTCCAGGT--C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843566 118 + 123690457 AGAG----CTTTCCTCTCCCAAATCAAAGCCACTCCTGTTCCTATCTCCAGGATGAAACCCCCACCTTGGTATGCAAGGGTcttcatgatatggcctcagccaactatcttagctccaggt--c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202443831 118 + 204787373 AGAG----CCTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51659 118 + 192460366 AGAG----CCTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527248 118 + 19675229 AGAG----CCTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTCTTCATGATACGGCCTCAGCCAACTACCTTAGCTCCAGGT--G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463320 118 + 16847902 AGAG----CCTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399351 118 - 91754291 AGAG----CTTTCCTCTCCCAAATCAAAGCTACTCCTATTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTCTTCATGATACGGCCTCAGCCAACTACCTTAGCTCCAGGT--C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556698 118 - 1977891 AGAG----CCTTCCTCTCCCAAATCAAAGCTACTCCTATTCCTACCTCCGGGATGAAATCCCCACCTCGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--c i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435816 118 + 7796314 AGAG----CCTTCCTCTCCCAAATCAAAGCTACTCCTATTCCTACCTCTGGGATGAAATCCCCACCTTGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916613 120 - 74750902 AGAG----CTTTTCTCTCCCAAATCAAAGCTACTCCTCTTCCCACCTCCAGGATGAAATCCCCACCTTGGTGTGCAAGGGCcttcaagatttggcctcagccaacttccttagttccaggttct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444841 120 + 17725628 AGAG----CTTTTCTCTCCCAAATCAAAGCTACTCCTGTTCCCACCTCCAGGATGAAATCCCCACCTTGGTGTGCAAGGGCcctcaaggtttggcctcagccagcttcattagctccaggctct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407631 120 - 6778120 AGAG----CTTTTCTCTCCTAAATCAAAGCTACTCCTGCTCCCACCTCCAGGATGAAATCCCCACCTTGGTGTGCAAGGGCcttcaagatttggcctcagccaacttccttagctccaggttct i cebCap1.NW_016107444v1 I 2 C 0 s micMur3.chr1 25891190 116 - 114275543 AGAG----CTTTCCTGTCTAAAATCAAAACTATTCCTGTTCCTACCTACAGGAT--AAACCCCAGCTTGGTATAGAAGGGTCTTTGGCATATGGCCTCAGCCAACTCCCTCAGCTCCAGGT--C i micMur3.chr1 I 381 I 367 s otoGar3.GL873829 404457 101 - 608964 AGAG----CTTTCCTCTCTAAAATCAAAGCTATTCCTGTTCCTACCTACAGGAT-AAAACCTCAGCTT-GTATACAA---------------GGCCTGTGCCAGCATCCTCAATTCCAGAT--T i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29058414 102 + 31377067 AAGG----GCTCCCTTTCCA-----AAAGCTAGTCCTGTTCCTACCAAAGGAACAAAACTCCCAGCCTTGTATATCAGGGTCCTCGTGATCAGGGTT-----------CCCAGCTCTGTGT--C i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3882024 115 + 6579706 AGAGCTTTCTTTCCTCTTCCAAATCAAAGTGAGTCCTATTCCTACCTACCGGGCACAATACCCAGCTTGGTATATAAGGGTCTTCCTGA-------TTGGCCAGTTTCCCCAGCTCTGTGT--C i dasNov3.JH569502 C 0 I 2 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=600061.000000 s hg38.chr3_KI270779v1_alt 107430 59 + 205312 acggccccatcttccatatcctatgctgcttgcacaggaagcagctcgctaaccccagg- s panTro5.chr3 200091056 59 + 202621043 ACGGCCCCATCTTCCATATCCTATGCTGCTTGCACAGGAAGCAGCTCGCTAACCCCAGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70646 59 + 190779 acggccccatcttccatatcctatgctgcttgcacaggaagcagctcgctaaccccagg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35541 59 + 106623 ACGGCCCCATCTTCCATATCCTATGCTGCTTGCACAGGAAGCAGCTCTCTAACCCCAGG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120843684 59 + 123690457 gccaccccatcttccatatcctatgctccttgcacaggaagcagctcgctaaccccagg- i nomLeu3.chr11 C 0 I 315 s rheMac8.chr2 202443949 59 + 204787373 gcggccccatcttccatatcctgtgctccttgcacagggagcagctcgctaaccccagg- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51777 59 + 192460366 gcggccccatcttccatatcctgtgctccttgcacagggagcagcttgctaaccccagg- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527366 59 + 19675229 GCGGCCCCATCTTCCATATCCTGTGCTCCTTGCACAGGAAGCAGCTCGCTAACCCCAGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463438 59 + 16847902 gcggccccatcttccatatcctgtgctccttgcacagagagcagctcgctaaccccagg- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399469 59 - 91754291 GCGGCCCCATCTTCCATATCCTGTGCTCCTTGCACAGGGAGCAGCTCGCTAACCCCAGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556816 59 - 1977891 gcggccccatcttccatatcctgtgctccttgcacagggagcagctcgctaaccccagg- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435934 59 + 7796314 gctgccccatcttccatatcctgtgctccttgcacagggagcagctcgctaaccccagg- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916733 59 - 74750902 gtgaccccatcttccagattctatgctccttccacagggggcacctcgccaaccccagg- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 444961 59 + 17725628 gtgaccccatcttccatatcctgtgctccttccacagggggcatctcgctaaccccacg- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407751 59 - 6778120 gtgagcccatcctccataacctatgctccctccacagggggcatctcgctaaccccagg- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 404560 59 - 608964 AAGGTCCCATCTCCAGCTTCCTATGCCTCTTCCACAGGGAGCTTCTCAGTAATCCTGCT- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 29058518 59 + 31377067 GTAGACCCGCCTGCTATGTCTtatgttacttccacaggtaacttctcactacttccctg- i canFam3.chr33 I 2 I 1 s dasNov3.JH569502 3882141 60 + 6579706 ATGGCCCCATCTTCCACAGCCGACATTCCTTCCACAGGAAACTTCTCACCACTATCCGGC i dasNov3.JH569502 I 2 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25891306 367 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=797483.000000 s hg38.chr3_KI270779v1_alt 107489 80 + 205312 cacacctgctttcatctggagcgtctgcccatcatgattcctccccc--------------------tggtcccttcacctggaaaactcctattcattc s panTro5.chr3 200091115 80 + 202621043 CACACCTGCTTTCATCTGGAGTGtctgcccatcatgattcctccccc--------------------tggtcccttcacctggaaaactcctattcattc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70705 80 + 190779 cacacctgctttcatctggagtgtctgcccatcatgattcctccccc--------------------tggtcccttcacctggaaaactcctattcattc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35600 80 + 106623 CACACCTGCTTTCATCTGGAGTGtctgcccatcatgattcctcctcc--------------------tggtcccttcacctggaaaactcctattcattc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844058 79 + 123690457 cacacctgctttcatgtggagtgtctgcacatcatgattcttccccc---------------------ggtcccttcacccggaaaactcctattcattc i nomLeu3.chr11 I 315 C 0 s rheMac8.chr2 202444008 79 + 204787373 cacacctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggtccctttgcctggaaaactcctattcattc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51836 79 + 192460366 cacatctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggtccctttgcctggaaaactcctattcattc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527425 79 + 19675229 CACACCTGCTTCCATCTGGAGTGTCTGCACATCATGATtcttcccct---------------------ggtccctttgcctggaaaactcctattcattc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463497 79 + 16847902 cacacctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggtccctttgcctggaaaactcctattcgttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399528 79 - 91754291 CACACCTGCTTCCATCTGGAGTGTCTGCACATCATGATtcttcccct---------------------ggtccctttgcctggaaaactcctattcattc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556875 79 - 1977891 cacacctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggcccctttgcctggaaaactcctattcattc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 435993 79 + 7796314 cacacctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggtccctttgcctggaaaactcctattcattc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916792 80 - 74750902 cacacctgctttcatttggagtttctgcccatcgtgattcgtccccc--------------------ttgtccctccccttggaaaactcctattcattc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 445020 80 + 17725628 cacacctcctttcatctggagtttctgcccgccatgattcgtccccc--------------------ttgtcccttcccctggaaaactcctattcactc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407810 77 - 6778120 cacacctgctttcatctggagtttctgcccacc---atttgtccccc--------------------ttgtcccttcccctggaaaactcctactcattc i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 404619 55 - 608964 CACACCAGCTTTGCCCCAGGGTATCTGCGCACCGTGATTCTTCCCTT---------------------------------------------GTTGATTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29058578 100 + 31377067 catacctgctttgatccagagagtttgtacatcatgactcttgcccccaggatgctctcccgctctctggtccctccatctggaaaacttctgttcatgc i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3882201 98 + 6579706 CACACCCGCTTTGATCTGAAATGCTTGCACATCATGATTTCTCCCTC-AGATTATTTTCCCTCCCCCTGGTCCCTTTA-CTGGGAAGCTCCTATTCATTC i dasNov3.JH569502 C 0 I 158 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25891306 367 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=2682293.000000 s hg38.chr3_KI270779v1_alt 107569 287 + 205312 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac----ttcatcagattccctacagaggtgctgattttct-ggtct----------------------cttgtgtttctgttgtaacacttaacatgctgtattataatgtgcttattttatttacaagtttgttacattgtacgtgctcgaggacaagcagccggtagtattcacctctgtcatcacagaagctggcgtggagccctccacat-gagggcactgatgtgtttgctgagtgactgGGAC-AATGGTGGGCCACGTGA-------GCCCCGAAA-------CTTTCAG s panTro5.chr3 200091195 292 + 202621043 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac----ttcatcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctattgtaacacttaacatgctgtattataatgtgcttattttatttacaagtttgttacattgtacgtgctcgaggacaagcagccggtggtattcacctctgtcatcacagaagctggcgtggagccctccacat-gagggcactgatgtgtttgctgagtgactgGGAC-AATGGTGGGCCACGTGA-------GCCCCGAAA-------CTTTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 70785 292 + 190779 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac----ttcatcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttgtaacacttaacatgctgtattataatgtgcttattttatttacaagtttgttacattgtacgtgctcgaggacaagcagccggtagtattcacctctgtcatcacagaagctggcgtggagccctccacat-gagggcactgatgtgtttgctgagtgactgGGAC-AATGGTGGGCCACGTGA-------GCCCCGAAA-------CTTTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35680 287 + 106623 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac----ttcatcagattccctacagaggtgctgattttct-ggtct----------------------cttgtgtttctgttgtaacacttaacacgctgtattataatgtgcttattttatttacacgtttgttacattgtacgtgctcgaggacaagcagccggtagtattcacctctgtcatcacagaagctggcgtggagccctccacat-gagggcactgatgtgtttgctgagtgactgGGAC-AATGGTGGGCCACGTGA-------GCCCCGAAA-------CTTTCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844137 288 + 123690457 ctgaa---------------------------------------agcccagttcagatggcacctctcc---atgac----ttcgtcagattccctgcaggggtgctgattttct-ggtct-----------------ctttacatgtgtttctgttgtaacacttaacatgctgtactataatgtgcttattttatttacaagtttgtTACATTGTACGTGCTCTAGGACAAGCAG-----------CACCTCTGTCATCACAGAAGCTAGCGTGGAGCCCTCCACAT-CAGGGCAACGATGTGTTTGCTGAGTGACTGGGAC-CATGGTGGGCCACGTGAGCAGATGGCCCCGAAA-------CTTTCAG i nomLeu3.chr11 C 0 I 11 s rheMac8.chr2 202444087 299 + 204787373 ctcaa---------------------------------------agcccagttcaggtggcacctctct---atgac----ttcgtcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacattgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGTCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 51915 299 + 192460366 ctcaa---------------------------------------agcccagttcaggtggcacctctcc---atgac----ttcgtcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacattgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527504 299 + 19675229 ctcaa---------------------------------------agcccagttcaggtggcacctctcc---atgac----ttcgtcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacattgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463576 299 + 16847902 ctcaa---------------------------------------agcccagttcaggtggcacctctcc---atgac----ttcgtcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacactgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399607 299 - 91754291 ctcaa---------------------------------------agcccagttcaggtggcacctctcc---atgac----ttcgtcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttataacacataacatgctgtactataatgtgcttattttatttacaagtttgttacattttaggtgctctaggacaagcagccgatagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 556954 299 - 1977891 ctcaa---------------------------------------agcccagctcaggtggcacctctcc---atgac----ttcgtcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacactgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGCCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436072 299 + 7796314 ctcaa---------------------------------------agcccagttcaggtggcacctctcc---atgac----ttcatcagattccctacagaggtgctgattttct-ggtct-----------------ctttacttgtggttctgttataacacttaacatgctgtactataatgtgcttattttatttacaagtttgttacattgtaggtgctctaggacaagcagccggtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAA-------CTTTCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 916872 280 - 74750902 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac----tttgtcagattcccTGCAGAGGCACTGATTTCCT-GATCT-----------------CTTTACTTGTGTTTC-----TAACTCGGAACATGCTGTATTATAAAGTGCTTATTTTATTTACAAGTTTGTTAC-------------TGGGACAAGCAGCCGCCAGTCTTCGC--CAGTCTTCACAGAAGCTAGCATGGAGCCCTCCACAT-GAGGGCGCTGATGTGTTGGCTGAGTGACCGAGACGAATGGCGGGCCACGTGAGCAGGTGGCCCCAAAA-------CTTGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 445100 263 + 17725628 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac----tttgtcagattccccgcagaggtgcggatttcct-gatct-----------------ttttacttgtgtttctgttataacactgaacgtgctgtgttacaatgtgcttattttatttacaagtttgttac---------------------------------attcgc--cggtctTCACGGAAGGTGCCATGGAGCCCTCCACGT-GAGGGCGCCGAGGTCTTGGCTGAGTGAC--AGACGCACAGCGGGCCATGTGAGCAGGTGACCCCAAAA-------CTTGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 407887 292 - 6778120 ctcaa---------------------------------------agcccagttcagatggcacctctcc---atgac------tgtcagattccctgcagaggcgctgatttcct-gatct-----------------ctttacttgtgtttctgttatgacaccgaacacgctgtattacaatgtgcttattttatttacaagtttgttacattgcacgtgctctgggacaagcggccgctagtattcac--cagtcttcacagaagctggcatagagCCCTCCACAT-GAGGG-GCTGATGTCTTGGCTGAGTGAC--AGATGAATGGCGGGCCACGTGAGCAGATGGCCCCAAAA-------GTTG-AG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 404674 264 - 608964 TTAGA---------------------------------------AGTCCAGTTTAGATGGCACCTCTTC---ATGAC----TTTGTCAGATCCCCTAGGAAGGGGCTGATTTCTT-AATCT-----------------CTTT-------------------------ATGTGCtgtattgtaa---------tttacttacacatctgttaaattgcatgtgctttgggacaggaacc----agtgttcatctctgtagttacagaacccagcCTGGAGCCCT-AAGGT-GAGAGTACTCACTTGTTGGCTGAACAACTGAGATAGATGATGGGCTGTGTGAACAGATAGCCCGGAGAGAGGGACCCT---- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29058678 292 + 31377067 ttaga---------------------------------------ggcccagttcattcggtgcctcctt---gtggtggctttcctcaaattccctgaggagggtctagtttcat-cgtcc-----------------cttta----tgtttctgttatgacacttaacatactacat-----cctgcttcattcgcttatgagttggttaagtcatctgtgcttcaggacaggtgccatgcggtactcctccctgtagccacagaacctagtgcagagctctgtacctggaggatactcagctgttcgctgcataactgaGAG----GATGGGCCACGTGAGCAGGTGACCATGAAA-------TATGGGC i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3882457 317 + 6579706 cccaactgcctgagccacatttgttccccctattcgttcttagcagctcagttcagatggcccctccttctgatggc----tttcctcaactccctggggaggggctgggtttctcagtctcctgggctcccctaacactttgtttctatttctgttacagcatgcaacatgctatattataa--------ttttatttacaagtttgctaaactgtaagtgcttccgaacgagcaccatgaattcttcatctctgtagccatagagcctagtacagaga----------gagg----tga-atgtctgctgtgtgactgaGAT----GGTGGACC-CATGAGCAGACA----------------------- i dasNov3.JH569502 I 158 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e micMur3.chr1 25891306 367 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=603261.000000 s hg38.chr3_KI270779v1_alt 107856 51 + 205312 TGGGCTCTGAAAGTTAAGAAAAGGGCATTCAGTACTGAAATCACACAAAac s panTro5.chr3 200091487 51 + 202621043 TGGGCTCTGAAAGTTAAGAAAAGGGCATTCAGTACTGAAATCACACAAAac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71077 51 + 190779 TGGGCTCTGAAAGTTAAGAAAAGGGCATTCAGTACTGAAATCACACAAAac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 35967 51 + 106623 TGGGCTCTGAAAGTTAAGAAAAGGGCATTCAGTACTGAAATCACACAAAac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844436 51 + 123690457 TTAGCTCTGAAAGTTAAGAAAATGGCATTTGGTATTGAAGTCACACAAAAT i nomLeu3.chr11 I 11 C 0 s rheMac8.chr2 202444386 51 + 204787373 TGGGCTCTGAAAATTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52214 51 + 192460366 TGGGCTCTGAAAGTTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527803 51 + 19675229 TGGGCTCTGAAAGTTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463875 51 + 16847902 TGGGCTCTGAAAGTTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399906 51 - 91754291 TGGGCTCTGAAAGTTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557253 51 - 1977891 TAGGCTCTGAAAGTTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436371 51 + 7796314 TGGGCTCTGAAAGTTAAGAAAATGGCATTCGGTATTGAAGTCACACAAAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917152 51 - 74750902 TGAGCTCTGAAAGTTAAGAAAATGGCAGTTGGTATTGAAGTCAAACAAAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 445363 51 + 17725628 TGAGCTCTGAAAGTTAAGAAAACGGAATTCAGTATTGAAGTCAAACAAGAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408179 51 - 6778120 GGAGCTCTGAAAGTTAAGAAAATGGCATTCAGTATTGAAGTCAAACAAAAT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891673 51 - 114275543 TGGGCTCTGAAAGTTTCAACAATGGCATTCAGTGTTGaagtcaaacagaat i micMur3.chr1 I 367 C 0 s otoGar3.GL873829 404938 50 - 608964 -GGGCTCTGAAAGTCTAAAAAATGGCATTCAGTGTTGAAGTCAAACAGAAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29058972 51 + 31377067 TGGGCTCTGAAAGGTGAGAAAATAGTATTTAATATTGAAATCTAACAAAAT i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3882774 40 + 6579706 TGGG-----------AAAAAATGGGCAGTGAATTCTGAAAGTTAAGAAAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7408504 1083 + 22200726 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=652016.000000 s hg38.chr3_KI270779v1_alt 107907 58 + 205312 gtaaatttaatgatataattgttcc---gaagctgctctataatttggcatgaatggagag s panTro5.chr3 200091538 58 + 202621043 gtaaatttaatgatataattgttcc---gaagctgtactataattaggcatgaatggagag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71128 58 + 190779 gtaaatttaatgatataattgttcc---gaagctgtactataattaggcatgaatggagag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36018 58 + 106623 gtaaatttaatgatataattgttcc---gaagctgcactataattaggcatgaatggagag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844487 55 + 123690457 GTAAatttaatgat---attgttct---gaagctgcactataattaggcatgaatggagag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444437 58 + 204787373 GTAAatttaatgatataattgttct---gaagctgcactataattaggcatgaatggagag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52265 58 + 192460366 GTAAatttaatgatataattgttct---gaagctgcactataattaggcatgaatggagag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527854 58 + 19675229 GTAAatttaatgatataattgttct---gaagctgcactataattaggcatgaatggagag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463926 58 + 16847902 GTAAatttaatgatataattgttct---gaagctgcactacaattaggcatgaatggagag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 399957 58 - 91754291 GTAAatttaatgatatgattgttct---gaagctgcattataattaggcatgaatggagag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557304 58 - 1977891 GTAAatttaatgatataattgttct---gaagctgcactacaattaggcatgaatggagag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436422 58 + 7796314 GTAAatttaatgatataattgttct---gaagctgcactataattaggcatgaatggagag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917203 58 - 74750902 GTAAATGTAATGATATAATTGTTAT---GAAGCTGCACTATAATTAGGGATGGATGAAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 445414 57 + 17725628 GTAAGTTGAATGATG-AATTGTCAT---GAAGCTGCACTATGATCAGGTCTGAATGGAGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408230 55 - 6778120 GTAAatttaatgata-aattgttac---aaagctgcactctaattaggtatgaatg--gag i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891724 58 - 114275543 ataaatttgatgatatacatgttac---gaagttgcgctctaattaggcatgaatggagaa i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7409587 58 + 22200726 gtaaatttgatgatataaatgttag---gaagctgcgctataattaggcatgaatggagaa i proCoq1.NW_012133858v1 I 1083 C 0 s otoGar3.GL873829 404988 61 - 608964 GGAAATCTGTTGATATAAATGTTACCCTGCAGCTGCCCTGCAGTTAGACATGAATGGAGAA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059023 52 + 31377067 ATTAATTTAACGATATCAT---------TAAGCTACACTATAGTTAGGCATGAATGGATTG i canFam3.chr33 C 0 I 416 s dasNov3.JH569502 3882814 26 + 6579706 -----------------GGTATTCG---G---------TGTTattaaacacagaa------ i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=89805.000000 s hg38.chr3_KI270779v1_alt 107965 8 + 205312 cagtttac s panTro5.chr3 200091596 8 + 202621043 cagtttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71186 8 + 190779 cagtttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36076 8 + 106623 cagtttac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844542 8 + 123690457 cagtttac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444495 8 + 204787373 cagttgac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52323 8 + 192460366 cagttgac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527912 8 + 19675229 cagttgac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463984 8 + 16847902 cagttgac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400015 8 - 91754291 cagttgac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557362 8 - 1977891 cagttgac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436480 8 + 7796314 cagttgac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917261 8 - 74750902 CAGTTTAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 445471 8 + 17725628 CAGTTTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408285 7 - 6778120 cag-ttac i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891782 8 - 114275543 cagtttgc i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7409645 8 + 22200726 cagtttgc i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 405049 8 - 608964 CAGTTTGC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3882840 8 + 6579706 aagttaac i dasNov3.JH569502 C 0 I 133 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29059075 416 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=224750.000000 s hg38.chr3_KI270779v1_alt 107973 23 + 205312 aaaaatgac---AACACCACTGT-------TAT s panTro5.chr3 200091604 26 + 202621043 aaaaatgacaataacaccactgt-------tat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71194 26 + 190779 aaaaatgacaataacaccactgt-------tat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36084 26 + 106623 aaaaatgacaataacaccactgt-------tat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844550 26 + 123690457 aaaagtgacaataaCACCACTGT-------TAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444503 26 + 204787373 aaaaatgacaacagcaccactgt-------tat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52331 26 + 192460366 aaaaatgacAACAGCACCACTGT-------TAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527920 26 + 19675229 aaaaatgacaacagcaccactgt-------tat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 463992 26 + 16847902 aaaaatgacaataacaccactgt-------tat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400023 26 - 91754291 aaaaatgacaataaCACCACTGT-------TAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557370 26 - 1977891 aaaaatgacaataacaccactgt-------tat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436488 26 + 7796314 aaaaatgacaataacaccactgt-------tac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917269 26 - 74750902 GAAAGTGACAATAACACCACTGT-------TAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 445479 23 + 17725628 AGGAGTGAC---ACCACCACTGT-------TAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408292 23 - 6778120 aaaggtgac---aacaccactgt-------tac i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891790 31 - 114275543 ataaatgacaataacgccactgt--tatttaac i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7409653 33 + 22200726 ataaacgacagtaacatcactgttatatttaac i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 405057 25 - 608964 ATAAACCGTAATAACACCAC--------ATAAT i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e canFam3.chr33 29059075 416 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=551815.000000 s hg38.chr3_KI270779v1_alt 107996 48 + 205312 ATAAACCCAATTCTTAAATAGGTTTTCTTCTCTTGCTTTGTATTTCCT s panTro5.chr3 200091630 48 + 202621043 ataaacccaattcttaaataggttttcttctcttgctttgtatttcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71220 48 + 190779 ataaacccaattcttaaataggttttcttctcttgctttgtatttcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36110 48 + 106623 ataaacccaattcttaaataggttttcttctcttgctttgtatttcct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844576 48 + 123690457 ATAAACCCAGTTCTTAAATAGGTTTTCTCCTCTTGCTTTGTATTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444529 48 + 204787373 ataaacccaattcttaaatagttgttcttctcttgctttgtacttcct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52357 48 + 192460366 ATAAACCCAGTTCTTAAATAGTTGTTCTTCTCTTGCTTTGTACTTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 527946 48 + 19675229 ataaacccaattcttaaatagttgttcttctcttgctttgtacttcct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464018 48 + 16847902 ataaacccaattcttaaatagttgttcttctcttgctttgtacttcct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400049 48 - 91754291 ATAAACCCAATTCTTAAATAGTTGTTCTTCTCTTGCTTTGTACTTCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557396 48 - 1977891 ataaacccaattcttaaatagttgttcttctcttgctttgtacttcct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436514 48 + 7796314 ataaacccagttcttaaatagttgttcttctcttgctttgtACTTCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917295 41 - 74750902 ATAAACCCAATTCTTAG-------Tttttgttttgttttgtttttttt i calJac3.chr17 C 0 I 49 s saiBol1.JH378146 445502 41 + 17725628 ATGAACCCAATTCTTGG-------TTCTTCTCTTGCTTTGTACCCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408315 44 - 6778120 ataaacccaattcttag----tttttcttctcttgctttgtACCTCCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891821 44 - 114275543 ataaacccaatttttag----gttttttcctcttgctttgtacttctt i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7409686 44 + 22200726 ataaacctaattcttag----tttttcttctcttgctttgtacttctt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 405082 44 - 608964 ATGAACCCAGTTCTTAG----TTTTTCTTTTCTTGCTTTGTACTTCTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059491 48 + 31377067 ATAAATCCTATTCTTAAGTAGTTTTTCTTTTCCTGCTTTGCATTTATT i canFam3.chr33 I 416 C 0 e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=598244.000000 s hg38.chr3_KI270779v1_alt 108044 57 + 205312 CAAGTGGGTGATACTTAATACAGTGGCTCATGTAATCTTAATTAC-TACATATGAGGA s panTro5.chr3 200091678 57 + 202621043 cagATGGGTGATACCTAATACAGTGGCTCATGTAATCTTAATTAC-TACATATGAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71268 57 + 190779 cagATGGGTGATACCTAATACAGTGGCTCATGTAATCTTAATTAC-TACATATGAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36158 57 + 106623 caAATGGGTGATACCTAATACAGTGGCTCATGTAATCTTAATTAC-TACATATGAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844624 57 + 123690457 CAAATGGGTGATACCTAATACAGTGGCTCATGTAATCTTAGTTAC-TACATATGAAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444577 57 + 204787373 caAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATATGAGGA i rheMac8.chr2 C 0 I 2 s macFas5.chr2 52405 57 + 192460366 CAAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATATGAGGA i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 527994 57 + 19675229 caAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATATGAGGA i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 464066 57 + 16847902 caAATTGGTGTTACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATATGAGGA i cerAty1.NW_012004056v1 C 0 I 36 s chlSab2.chr15 400097 57 - 91754291 CAAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAG-TACATATGAGGA i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 557444 57 - 1977891 caAATTGGTGTTACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATATGAGGA i manLeu1.NW_012102020v1 C 0 I 36 s colAng1.NW_012118932v1 436562 57 + 7796314 CAAATTGGCGGTGCCTAATACAGGGGCTCACGTAATATTAATTAC-TACATATGAGGA i colAng1.NW_012118932v1 C 0 I 2 s saiBol1.JH378146 445543 57 + 17725628 CAAATTGGTGGTACCTAATACAGTGGTTCATGTCACCTTAATTAC-TGCATATGAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408359 57 - 6778120 CAAATTGGTGGTACCTAATACAGTGGTTCACGTCATCTTAAGTGC-TGCATACGAGGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891865 52 - 114275543 caAATTGGTGACACCTAATACAGTGG-----TTAATCTTAATTAT-TACATATGAGGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7409730 57 + 22200726 caAATTGGTGATACCTAATACAGTGGTTAACTTAATCTTAATTAC-TACATATAAGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 405126 57 - 608964 CAGATTGGTGGTATCTAACACAGCAGTTAATTTAATCTCAATTTC-TATGTATAAGGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059539 57 + 31377067 TGAATCGAGGATACCTGATAAAGTGGATAATTT-ATTTTAATTACATGCATATAAGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=11591.000000 s hg38.chr3_KI270779v1_alt 108101 8 + 205312 CACGGACA s panTro5.chr3 200091735 8 + 202621043 CACGGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71325 8 + 190779 CACGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36215 8 + 106623 CACGGACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844681 6 + 123690457 CAC--ACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444636 8 + 204787373 CATGTACA i rheMac8.chr2 I 2 I 23 s macFas5.chr2 52464 8 + 192460366 CATGTACA i macFas5.chr2 I 2 I 23 s macNem1.NW_012014355v1 528053 8 + 19675229 CATGTACA i macNem1.NW_012014355v1 I 2 I 23 s chlSab2.chr15 400156 8 - 91754291 CATGTACA i chlSab2.chr15 I 2 I 23 s colAng1.NW_012118932v1 436621 8 + 7796314 CATGTACA i colAng1.NW_012118932v1 I 2 I 23 s saiBol1.JH378146 445600 6 + 17725628 CACGCA-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408416 6 - 6778120 CACGCG-- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891917 6 - 114275543 CACACA-- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7409787 6 + 22200726 CACACA-- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 405183 6 - 608964 CACACA-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059596 6 + 31377067 CATATA-- i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I e manLeu1.NW_012102020v1 557501 36 - 1977891 I e cerAty1.NW_012004056v1 464123 36 + 16847902 I a score=634732.000000 s hg38.chr3_KI270779v1_alt 108109 69 + 205312 TGTACATATGATGC-----------TGATTACTGTTATTTTTGGAAGT--AAAAAAATTGTAAAATTTGACTAGCTTAAAAA s panTro5.chr3 200091743 69 + 202621043 TGTACATATGATGC-----------TGATTACTGCTATTTTTGGAAGT--AAAAAAATTGTAAAATTTGACTAGCTTAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71333 69 + 190779 TGTACATATGATGC-----------TGATTACTGCTATTTTTGGAAGT--AAAAAAATTGTAAAATTTGACTAGCTTAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36223 69 + 106623 TGTACATATGATGC-----------TGATTACTGTTATTTTTAGAAGT--AAAAAAATTGTAAAATTTGACTAGCTTAAAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844687 69 + 123690457 TGTACGTATAGTGC-----------TGATTACTGTTATTTTTGGAAGT--AAAAAAATTGTAAAATTTGACTAGCTTAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444667 68 + 204787373 TGTACATATAATGT-----------TGATTATTGTTATTTTTGGAAGT--AAAAAA-ATGTAAAATTTGACTAGTTTAAAAA i rheMac8.chr2 I 23 C 0 s macFas5.chr2 52495 68 + 192460366 TGTACATATAATGT-----------TGATTATTGTTATTTTTGGAAGT--AAAAAA-ATGTAAAATTTGACTAGTTTAAAAA i macFas5.chr2 I 23 C 0 s macNem1.NW_012014355v1 528084 69 + 19675229 TGTACATATAATGT-----------TGATTATTGTTATTTTTGGAAGT--AAAAAAGATGTAAAATTTGACTAGTTTAAAAA i macNem1.NW_012014355v1 I 23 C 0 s cerAty1.NW_012004056v1 464159 66 + 16847902 TGTACATATAATGC-----------TGATTA---TTATTTTTGGAAGT--AAAAAAAGTGTAAAATTTGACTAGTTTAAAAA i cerAty1.NW_012004056v1 I 36 C 0 s chlSab2.chr15 400187 66 - 91754291 TGTACATATAATGC-----------TGATTA---TTATTTTTGGAAGT--AAAAAAAGTGTAAACTTTGACTAGTTTAAAAA i chlSab2.chr15 I 23 C 0 s manLeu1.NW_012102020v1 557537 66 - 1977891 TGTACATATAATGC-----------TGATTA---TTATTTTTGGAAGT--AAAAAAAGTGTAAAATTTGACTAGTTTAAAAA i manLeu1.NW_012102020v1 I 36 C 0 s colAng1.NW_012118932v1 436652 69 + 7796314 TGTACATATAATGC-----------TGATTATTGTTATTTTTGGAAGT--AAAAAAAGTGTAAAATTTGACTAGTTTTAAAA i colAng1.NW_012118932v1 I 23 C 0 s saiBol1.JH378146 445606 69 + 17725628 TGTGCATACAACGC-----------TGATTATCGTTATTTTTGGAAGT--CAAAAATCTGTGACATTTGACAACCTTTAAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408422 69 - 6778120 TGTACATACAACGC-----------TGATTATCGTTATTTTTGGAAGT--CAAAAATTTGTGAAATTTGACTACCTTTAAAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25891923 70 - 114275543 TGTACATACAACAC-----------TGATTACTGTTGTTATTGGAAGT-CAAAAAATTTGTAAAATTTGACTAGCCTAAAAA i micMur3.chr1 C 0 I 25 s proCoq1.NW_012133858v1 7409793 70 + 22200726 TGTACATGCAATGC-----------TGATTACTGTTTTTATTGGAAGT-CAAAAAATTTGTAACATTTAACTAGCCTAAAAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 405189 71 - 608964 TGTACATACAATGC-----------TGATAGCTGTTTTGATCAGAAGTAAAAAAAACTTGTGAAATTTGACTGTTCAAAACA i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29059602 54 + 31377067 TGTACATGCAATGCTTCCAATAACATGATTACTGTTA---TTGGAAGC--CAAAAATTT----------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=14025.000000 s hg38.chr3_KI270779v1_alt 108178 2 + 205312 AT s panTro5.chr3 200091812 2 + 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71402 2 + 190779 AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36292 2 + 106623 AT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844756 2 + 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444735 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52563 2 + 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528153 2 + 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464225 2 + 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400253 2 - 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557603 2 - 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436721 2 + 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 445675 2 + 17725628 AT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408491 2 - 6778120 AT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7409863 2 + 22200726 AT i proCoq1.NW_012133858v1 C 0 I 277 s otoGar3.GL873829 405262 1 - 608964 A- i otoGar3.GL873829 I 2 C 0 e micMur3.chr1 25891993 25 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e canFam3.chr33 29059656 0 + 31377067 C e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=140897.000000 s hg38.chr3_KI270779v1_alt 108180 14 + 205312 CTGTAAAATATGGG s panTro5.chr3 200091814 14 + 202621043 CTGTAAAATATGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71404 14 + 190779 CTGTAAAATATGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36294 14 + 106623 CTGTAAAATATGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844758 14 + 123690457 CTGTAAAATATGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444737 14 + 204787373 CTGTAAAATATGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52565 14 + 192460366 CTGTAAAATATGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528155 14 + 19675229 CTGTAAAATATGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464227 14 + 16847902 CTGTAAAATATGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400255 14 - 91754291 CTGTAAAATATGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557605 14 - 1977891 CTGTAAAATATGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436723 14 + 7796314 CTGTAAAATATGGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 445677 14 + 17725628 CTGTAAAATAAGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408493 14 - 6778120 CTGTAAAATAAGGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 405263 14 - 608964 TTGTAAAATATGAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059656 13 + 31377067 -TGTAAAATATAGG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25891993 25 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=770075.000000 s hg38.chr3_KI270779v1_alt 108194 108 + 205312 -ATACACAAATTAG--------------------------------------------------------------------------------------------------------------------------Agactgggtgcggtggctcatgcctgtaatcccagcactttgagaggccgaggcaggcggatcacttgaggccaggagtttgagaccaacccagg s panTro5.chr3 200091828 108 + 202621043 -ATACACAAATTAG--------------------------------------------------------------------------------------------------------------------------Agactgggtgcggtggctcatgcctgtaatcccagcactttgagaggccgaggcgggcggatcacttgaggccaggagtttgagaccaacccagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71418 108 + 190779 -ATACACAAATTAG--------------------------------------------------------------------------------------------------------------------------Agactgggtgcggtggctcatgcctgtaatcccagcactttgagaggccgaggcgggcggatcacttgaggccaggagtttgagaccaacccagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36308 108 + 106623 -ATACACAAATTAG--------------------------------------------------------------------------------------------------------------------------Agactgggtgcggtggctcatgcctgtaatcccagcactttgagaggccgaggcgggcggatcacttgaggccaggagtttgagaccaacccagg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844772 106 + 123690457 -ATACACAAATTAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgcggtggctgacgcctgtaatcccagcactttgagaggccgaggcgggcggatcac--gaggtcaggagtttgagaccaacctagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444751 108 + 204787373 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgcggtggctcacgcctgtaatcccggcactttgagaggccaaggcgggcagatcacttgaggccagaagtttgagaccaacttagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52579 108 + 192460366 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggcagggtgcggtggctcacgcctgtaatcccggcactttgagaggccaaggcgggcagatcacttgaggccagaagtttgagaccaacttagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528169 108 + 19675229 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgcggtggctcacgcctgtaatcccggcactttgagaggccaaggcgggcagatcacttgaggccagaagtttgagaacaacttagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464241 108 + 16847902 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgcggtggctcacgcctgtaatcccagcactttgagaggccaaggcaggcagatcacttgaggccagaagtttgagaccaacttacg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400269 108 - 91754291 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgcggtggctctcgcctgtaatcccagcactttgagaggccgaggcaggcggatcacttgaggctagaagtttgagaccaacttagg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557619 108 - 1977891 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgcggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggtggatcatttgaggccagaagtttgagaccaacttagg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436737 108 + 7796314 -ATACACAAATCAG--------------------------------------------------------------------------------------------------------------------------Aggctgggtgccgtggctcacgcctgtaatcccagcactttgagaggccaaggcgggcggatcacttgaggccagaagtttgagaccaacttagg i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 445691 92 + 17725628 -ATATAGAAATTAG--------------------------------------------------------------------------------------------------------------------------AGGCTGAG----------------tgtgatcccagcacttggagaggctgaggggggcacattgcttgaggccaggagtttgagaccaacctggg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408507 92 - 6778120 -GTATACAAATTAG--------------------------------------------------------------------------------------------------------------------------AGGCTGAG----------------tgtcatctcagcactttgagaggctaaggggggcagattgcttgaggcccggagtttgagaccagcctggg i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 405277 230 - 608964 CATTTGGGAATTAAAGTGTATAATTATGATTGCATgagagagagagagagaggagagaagaaagaagagagagaATGGGGTATGTGTGTGTGTGTGAGAAAGAGTACTACTAGAGATTATCAATGTTAGCAAAATTAggctgggcacagtggctcacacctgtaatcct-gcactctggaaggccaaggtaggaggattgcttgaactcaggagtatgagaccagcctgag i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25891993 25 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3882848 133 + 6579706 I e canFam3.chr33 29059669 0 + 31377067 C e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=1441649.000000 s hg38.chr3_KI270779v1_alt 108302 203 + 205312 caacatggtga--aatcctgtctctact-aaaaatacacaaattagctgggcatagtggcaggtgcctgtaatcccaactactcaaaagggtgaggcaggagaa--tcacttgaacctgggaggcggaggttgcagtgagctgagattgcgtcactgcactccagcct--ggtgacagagcgagaccgtgtctcaaa-----aCGTCAACAAGAA s panTro5.chr3 200091936 203 + 202621043 caacatggtga--aatcctgtctctact-aaaaatacacaaattagctgggcgtagtggcaggtgcctgtaatcccaactactcaagagggtgaggcaggagaa--tcacttgaacctgggaggcagaggttgcagtgagctgagattgtgtcactgcactccagcct--ggtgacggagcgagaccctgtctcaaa-----aCATCAACAGCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71526 203 + 190779 caacatggtga--aatcctgtctctact-aaaaatacacaaattagctgggcgtagtggcaggtgcctgtaatcccaactactcaagagggtgaggcaggagaa--tcacttgaacctgggaggcggaggttgcagtgagctgagattgtgtcactgcactccagcct--ggtgacggagcgagaccctgtctcaaa-----aCATCAACAGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36416 203 + 106623 caacatggtga--aatcctgtctctact-aaaaatacacaaattagctgggcatagtggcaggtgcctgtaatcccaactactcaagagggtgaggtagaagaa--tcacttgaacctgggaggcggaggttgcagtgagctgagattgcgtcactgcactccagcct--ggtgacagagcgagaccctgtctcaaa-----aCATCAACAACAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120844878 204 + 123690457 caacatggtga--aaaactgtctctact-aaaaatacacaaattagctgggtgtagtggcaggtgcctgtaatcccagttactcaggaggctgaggcaggagaa--ttgcttgaacctgggaggcagaggttgcagtgagctgagactgcgtcactgccctccagcct-gggtgacagagcgagaccgtgtctcaaa-----aCATCAACGACAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202444859 200 + 204787373 caacatggtga--aatcctatctctact-aaaaatacacaaattagctgggtgtggtggcatgtggctgtaatcccaactactcaggaagctgaggcaggagaa--tcacttgaacccgggaagtggaggttgccgtgagcagagattgcatcactgcactccagcct--ggcgacagagcgagcccctgtctcaaa-----a---caacaacaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52687 200 + 192460366 caacatggtga--aatcctatctctact-aaaaatacacaaattagctgggtgtggtggcatgtggctgtaatcccaactactcaggaagctgaggcaggagaa--tcacttgaacccgggaagtggaggttgccctgagcagagattgcatcactgcactccagcct--ggcgacagagcgagcccctgtctcaaa-----a---caacaacaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528277 200 + 19675229 caacatggtga--aatcctatctctact-aaaaatacacaaattagctgggtgtggtggcgggtggctgtaatcccaactactcaggaagctgaggcaggagaa--tcacttgaacccgggaagtggaggttgccgtgagcagagattgcatcactgcactccagcct--ggcgacagagcgagcccctgtctcaaa-----a---caacaacaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464349 200 + 16847902 caacatggtga--aatcctatctctact-aaaaatacacaaactagctgggtgtggtggcatgtggctgtaatcccaactactcaggaagctgaggcaggagaa--tcacttgaacccagaaagtggaggttgccgtgagctgagattgcgtcactgcactccagcct--ggcgacagagcgagcccctgtctcaaa-----a---caacaacaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400377 200 - 91754291 caacatggtga--aatcctgtctctact-aaaaatacacaaattagcagggcgtggtggcatgtggctgcaatcccaactactcaggaggctgaggcaggagaa--tcgcttgaacccaggaagtggaggttgctgtgagctgagattgtgtcactgcactccagcct--ggcgacagagcgagcccctgtctcaaa-----a---caacaacaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557727 200 - 1977891 caacatggtga--aatcctgtctctact-aaaaatacacaaactagctgggcgtggtggcatgtggctgtaatcccaactactcaggaggctgaggcaggagaa--tcgcttgaacccggaaagtggaggttgccgtgagctgagattgcgtcactgcactccagcct--ggcgacagagcgagcccctgtctcaaa-----a---caacaacaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 436845 200 + 7796314 caacatggtga--aatcctgtctctact-aaaaatacacaaattagctgggcatggtggcatgtggctgtaatcccaactactcaggaggctgaggcaggagaa--tcacttgaacccaggaagtggaggttgccgtgagctgagattgcgtcactgcactccagcct--ggcaacagagtgagcccctgtctcaaa-----a---caacaacaa i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 445783 206 + 17725628 caacatggtga--aaccccatccctact-aaaaatagaaaaattagccgggcatggtggtgcacgcctgtagtcccaactacttgggaggctgaggcaggagaa--ttgcctgaacccgggaggcagaggttgcagggagctgagatcacaccactgcactccagcct-gggcaactgagcgagaccctgtctcacacaaaaa---cagcaacaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408599 196 - 6778120 caacgtggtga--aaccctgtccctact-aaaaatagaaaaattagcaggccgtggtggctcacacctgtaatcccagctactcaggaggccgaggcaggagaattttgcttgaacccgggaggcagaggttgcagtgcgctgagat--------tgcactccagcct-gagcagctgagcgggaccctgtctcaaac----a---caacaacaa i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 405507 191 - 608964 caaga--gcaa--gatgctgtccctattaaaaaatagaaaaattagcctggcattgtggtaggtgcttatagtctcagctactcagaaggctggggcaggaaga--ttgcttgaacccag-agtttgaggttgccatgagctaagctgatgccatgacactctagcctggggcaacagagtgagataccgcatcaaa-----a------------ i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3882981 98 + 6579706 CAATACAGTAGATAATTTCATCTTAATT-AAGGACACACACACT-------------------TACACACAATGCTGACTACT-----------------GTTA--TTATTGGAGTCCAAAAAATGTAAAATATGGG------------------------------------------------------------------------------ i dasNov3.JH569502 I 133 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25891993 25 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29059669 0 + 31377067 C e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=57679.000000 s hg38.chr3_KI270779v1_alt 108505 9 + 205312 CAACACAAA s panTro5.chr3 200092139 9 + 202621043 CAACACAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71729 9 + 190779 CAACACAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36619 9 + 106623 CAACACAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845082 9 + 123690457 CAACACGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445059 9 + 204787373 caaaacaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52887 9 + 192460366 caaaacaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528477 9 + 19675229 caaaaCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464549 9 + 16847902 caaaacaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400577 9 - 91754291 caaaacaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557927 9 - 1977891 caaaacaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437045 9 + 7796314 caaaacaaa i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 445989 9 + 17725628 caaaacaaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408795 9 - 6778120 CACAACAGA i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29059669 9 + 31377067 CTATGCCAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883079 9 + 6579706 ATACGCCAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25891993 25 - 114275543 I e otoGar3.GL873829 405698 0 - 608964 C e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=456269.000000 s hg38.chr3_KI270779v1_alt 108514 42 + 205312 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT s panTro5.chr3 200092148 42 + 202621043 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71738 42 + 190779 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36628 42 + 106623 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845091 42 + 123690457 TTAGAAGCATTTGGGAACTAAAGAGTATAATTATGATTGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445068 42 + 204787373 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52896 42 + 192460366 TTAGAAGCATTTGGGAACTAAAATGTTTCATTATGATTGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528486 42 + 19675229 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464558 42 + 16847902 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400586 42 - 91754291 TTAGGAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557936 42 - 1977891 TTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437054 42 + 7796314 TTAGGAGCATTTGGGAACTAAAATGTATCATTATGATTGCAT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 445998 42 + 17725628 TCAGAAGCATTTGGGAACTAAAGTGTATAATTATGATTGCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 408804 42 - 6778120 TTAGAAGCGTTTGGGAACTAAAGTGTATAATTATGATTGCAT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25892018 42 - 114275543 TTAGAAGCATTTGGAAATTAAAGTGTATAATTATGATTGCAT i micMur3.chr1 I 25 I 143 s canFam3.chr33 29059678 42 + 31377067 TTAGAAGCATTTGGGAACTAAAGTGTATAATTAtgtgtgtgt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883088 37 + 6579706 TCAGAAGCATTTGGGAATTGAAGTATATAATT-----TGCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e otoGar3.GL873829 405698 0 - 608964 C e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=131641.000000 s hg38.chr3_KI270779v1_alt 108556 60 + 205312 GTGG---GTGGGTT-GGGGGGGGACAATAAAGAGGAAGAGAGAC--------------------------tgtgt----gtgtgtgtgtgtgtg- s panTro5.chr3 200092190 58 + 202621043 GTGG---GTGGGTT-GGGGGGGGACAATAAAGAGGAAGAGAGAC----------------------------AGA----gtgtgtgtgtgtgtg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71780 60 + 190779 GTGG---GTGGGTT-GTGGGGGGACAATAAAGAGGAAGAGAGAC--------------------------AGAgt----gtgtgtgtgtgtgtg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36670 77 + 106623 GTGG---GTGGGTTGGGGGGGGGACAATAAAGAGGAAGAGAGAGAGAG--AGAgtgtgtgt--------gtgtgt----gtgtgtgtgtgtgtg- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845133 74 + 123690457 GTGGTGCGGGGGTT--GGGGGGAACAATAAAGAGGAAGAAAGAG------AGAAtgtgtgt--------gtgtgt----gtgtgtgtgtgtgtg- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445110 78 + 204787373 GTG----GTGG----TGGGAGGAACAATAAAGAGGAAGAAAGAGAA----tgtgtgtgtgtgtgtaaatgtgtgt----gtatgtgcgtgtgtg- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 52938 78 + 192460366 GTG----GTGG----TGGGAGGAACAATAAAGAGGAAGAAAGAGAA----tgtgtgtgtgtgtgtaaatgtgtgt----gtatgtgcgtgtgtg- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528528 80 + 19675229 GTG----GTGG----TGGGAGGAACAATAAAGAGGAAGAAAGAGAAtg--tgtgtgtgtgtgtgtaaatgtgtgt----gtatgtgcgtgtgtg- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464600 86 + 16847902 GTG----GTGG----TGGGGGGGACAATAAAGAGGAAGAAAGAGAGAGAAtgtgtgtgtgtgtgtgtatgtgtgtgcgcgtatgtgtgtatgtA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400628 70 - 91754291 GTG----GTGG----GGGGGGGGACAATAAAGAGGGAGAAAGAGAGAGAAtgtgtgtgtgtatgtatgtgtgtg----------------tgtg- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 557978 84 - 1977891 GTG----GTGG----TGGGGGGGACAATAAAGAGGAAGAAAGAGAGAGAAtgtgtgtgtgtgtgtatgtgtgtgc--gcgtatgtgtgtatgtA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437096 68 + 7796314 GTG----GTGG----TGGGGGTGACAATAAAGAGGAAGAAAGAGAGAGAAtatgtgtgtgt------------------gtatgtgtgtgtgtg- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 446040 56 + 17725628 GTT------------GAGAAGGGACAATAAAGAGGAAGAAAGAGAGAA----------------------tgtgt----gtgtttttgtgtgtc- i saiBol1.JH378146 C 0 I 106 s cebCap1.NW_016107444v1 408846 54 - 6778120 GTG------------GGG--GGGGCAATAAAGAGGAAGAAAGAGAGAA----------------------tgtgt----gtgtgtttgcgtgtg- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 405698 16 - 608964 -----------------------gaaatgaaaaaaaaaa-------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059720 38 + 31377067 gtgt---gtgt----gtgagagagagagagagagagagagagaga-------------------------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883125 22 + 6579706 ---------------------------------------------------------------------GTAGGT----GACAGTGTGTGTGAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25892060 143 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 917336 49 - 74750902 I a score=39542.000000 s hg38.chr3_KI270779v1_alt 108616 6 + 205312 tgtgtg s panTro5.chr3 200092248 6 + 202621043 tgtgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71840 6 + 190779 tgtgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36747 6 + 106623 tgtgCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845207 6 + 123690457 CGCGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445188 6 + 204787373 tgtgcg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 53016 6 + 192460366 tgtgCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528608 6 + 19675229 tgtgCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464686 6 + 16847902 CGCGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400698 6 - 91754291 cgtgCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558062 6 - 1977891 CGCGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437164 6 + 7796314 CATGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917385 6 - 74750902 TGTGTG i calJac3.chr17 I 49 C 0 s saiBol1.JH378146 446202 6 + 17725628 tgtgtg i saiBol1.JH378146 I 106 C 0 s cebCap1.NW_016107444v1 408900 6 - 6778120 tgtgtg i cebCap1.NW_016107444v1 C 0 I 366 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25892060 143 - 114275543 I e otoGar3.GL873829 405714 0 - 608964 C e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883147 0 + 6579706 C e canFam3.chr33 29059758 0 + 31377067 C e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=28721.000000 s hg38.chr3_KI270779v1_alt 108622 6 + 205312 CACGCC s panTro5.chr3 200092254 6 + 202621043 CACGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71846 6 + 190779 CACGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36753 6 + 106623 CACGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845213 6 + 123690457 CATGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445194 6 + 204787373 cacact i rheMac8.chr2 C 0 C 0 s macFas5.chr2 53022 6 + 192460366 CACACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528614 6 + 19675229 CACACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 464692 6 + 16847902 CACACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 400704 6 - 91754291 CACACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558068 6 - 1977891 CACACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437170 6 + 7796314 CACACC i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25892060 143 - 114275543 I e otoGar3.GL873829 405714 0 - 608964 C e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883147 0 + 6579706 C e canFam3.chr33 29059758 0 + 31377067 C e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 408906 366 - 6778120 I e calJac3.chr17 917391 0 - 74750902 C e saiBol1.JH378146 446208 0 + 17725628 C a score=1042195.000000 s hg38.chr3_KI270779v1_alt 108628 101 + 205312 TGTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCTAACAGGAGCCAGAAGTCCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA s panTro5.chr3 200092260 101 + 202621043 TGTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCTAACAGGAGCCAGAAGTCCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71852 101 + 190779 TGTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCTAACAGGAGCCAGAAGTCCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36759 101 + 106623 TGTATTACTGGAGATGACGAAAGTTAGCAGGAGTAATGTTACCAAGCTAACAGGAGCCAGAAGTCCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845219 101 + 123690457 TGTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445200 101 + 204787373 tctattactggagatgaccaaAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i rheMac8.chr2 C 0 I 1 s macFas5.chr2 53028 101 + 192460366 TCTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 528620 101 + 19675229 TCTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 464698 101 + 16847902 TATATTACTGGAGACGACCAAAGTTAGCAGGAGTAACGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCGCCAGCTATTTAAGATTCTAAA i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 400710 101 - 91754291 TGTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 558074 101 - 1977891 TATATTACTGGAGATGACCAAAGTTAGCAGGAGTAACGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCATCTATTTAAGATTCTAAA i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 437176 101 + 7796314 TGTATTACTGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTAGAGAAAACTCTCCAGCTATTTAACATTCTAAA i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 917391 100 - 74750902 TGTATTCCTGGA-ATGGTCAACCTTACCAGGAGTAATGTTACCAAACCAGCAGGAGCCAAAAGCACCCGGAGAAAACTCTCCAGAGATTGAAGATTCCAAA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 446208 100 + 17725628 tgtgtTCCTGGAGATGATCAAACTTAGCAGGAGTTATATTACCAAACCAACAGGAGCCAAAAGCA-CCGGAGAAAACTCTCCAGCGACTTCTGATCCTAAA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 409272 101 - 6778120 tgtATTCCTGGAAATGATCAAACTTAGCAGGAGTAATATTACCAAACCAACAGGAGCCAGAAGCACCCGGAGAAAACTCTCCAGCAATTTAAGATTCTAAA i cebCap1.NW_016107444v1 I 366 I 1 s otoGar3.GL873829 405714 57 - 608964 ------------------------TAGCAG--------TTACCAAACCAGCAAGAACC------------AGAAAAGTCTCCAGTTATATAAGATTCTAAA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29059758 99 + 31377067 -gaATTACTGGAGATGACCAGAATTAGCAGAACTAATGCAAGAACAGCAGCAAGAACCCGAAG-GCCTGGGGAAAATTCTCCAGTTATTTAAGACTTAAAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883147 95 + 6579706 -----TACTGCAGATAACTAAAGTTAGCAGAAGCAATTCCA-CAAACCAGCAAGAACCAGAAGTACCTGGAGAAAAATCACCAGCTATTTATGGTTCTAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e micMur3.chr1 25892060 143 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=569497.000000 s hg38.chr3_KI270779v1_alt 108729 52 + 205312 -GTGTGTGTATATGAGGTAAAAATGCCAC--GTTTTATAAAGACAAATTTAAGCA s panTro5.chr3 200092361 54 + 202621043 -GTGTGTGTATATGAGGTAAAAATGCCACATGTTTTATAAAGACAAATTTAAGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 71953 52 + 190779 -GTGTGTGTATATGAGGTAAAAATGCCAC--GTTTTATAAAGACAAATTTAAGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36860 54 + 106623 -GTGTGTGTATATGAGGTAAAAATGCCACATGTTTTATAAAGACAAATTTAAGCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845320 52 + 123690457 -GTGTATGTATATGAGGTAAAAATGCCAC--GTTTTATAAAGACAAATCTAAGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445302 54 + 204787373 -GTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCG i rheMac8.chr2 I 1 C 0 s macFas5.chr2 53130 54 + 192460366 -GTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCG i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 528722 54 + 19675229 -GTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCG i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 464800 54 + 16847902 -GTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCG i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 400812 54 - 91754291 -GTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCG i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 558176 52 - 1977891 -GTGCGTGTATATGAGGTAAAAATGTCAC--GTTTTATAAAGACAAATTTAAGCG i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 437278 54 + 7796314 -GTGTGTGTATATGCGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCG i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 917492 50 - 74750902 -G--GGTGCATGTGAGGTAAAACTGTCAC--GTTTTATAAAGACAAATGGAAGCG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 446309 54 + 17725628 -GCATGTGCGTGTGAGCTGAAACTGTCGCGTGTTTTATAAAGACGAAGGGAAGCG i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 409374 52 - 6778120 -GTGTGTGCATGTGAGGTAAAACTGTCAC--GTGTTACAAAGACAAATGGAAGCG i cebCap1.NW_016107444v1 I 1 C 0 s micMur3.chr1 25892203 53 - 114275543 -GTGTGTATATATGAGGTGAAA-TGCCACATGTTTCATGAAGACAAATGTGGGTG i micMur3.chr1 I 143 C 0 s otoGar3.GL873829 405772 53 - 608964 -CTGTGTATATAGGAGGTGAAG-TGCCACATATTTCATAAAGACAAATGCAAGTG i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29059857 53 + 31377067 -GTGTGTGTGTATGAGGTGAAA-TGGCACATATTTCATGAAAATGGAGCGGGGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883242 55 + 6579706 GGGGTGTGCATGTGAGATGAAGAAACCACGTCTTTCATAAAGACAGGGGTGGGCG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7409865 277 + 22200726 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=792123.000000 s hg38.chr3_KI270779v1_alt 108781 62 + 205312 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGTGTGAGCTCTGAGACGGC s panTro5.chr3 200092415 62 + 202621043 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTCGGCGTGAGCTCTGAGACGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72005 62 + 190779 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTCGGCGTGAGCTCTGAGACGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36914 62 + 106623 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTCGGCGTGAGCTCTGAGACGGT i gorGor5.CYUI01000576v1 C 0 I 1 s nomLeu3.chr11 120845372 62 + 123690457 TGGACCTAAACCAGATGGCCTGTCTAAAGTCACCTGTGACTCGGCGTGAGCTCTGAGACGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445356 62 + 204787373 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i rheMac8.chr2 C 0 I 15 s macFas5.chr2 53184 62 + 192460366 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i macFas5.chr2 C 0 I 11 s macNem1.NW_012014355v1 528776 62 + 19675229 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i macNem1.NW_012014355v1 C 0 I 15 s cerAty1.NW_012004056v1 464854 62 + 16847902 TGGACCTACACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i cerAty1.NW_012004056v1 C 0 I 15 s chlSab2.chr15 400866 62 - 91754291 TGCGCCTAAACAGGATAGCCTGTTTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGATGGC i chlSab2.chr15 C 0 I 15 s manLeu1.NW_012102020v1 558228 62 - 1977891 TGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i manLeu1.NW_012102020v1 C 0 I 15 s colAng1.NW_012118932v1 437332 62 + 7796314 TGGACCTAAACAACATGGCCTGTTTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGATGGC i colAng1.NW_012118932v1 C 0 I 15 s calJac3.chr17 917542 61 - 74750902 TAGTCCT-AACAAGACAGCCCGTCTGAAGTCCCCGGCGACTCTGCGTGAACTGTGAGTTGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 446363 62 + 17725628 CAGCCCTAAACTGGACAGCCCGTCCAACATCCCCTGCGACTCTGCGTGGACTCTGAGTCGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 409426 62 - 6778120 TAGTCCTGAACAAGACTGCCTGTGTAAAGTCCCCTGCGACTCTGCGTGAGCTCTGAGTTGCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25892256 62 - 114275543 TGGACCTAAACAAGATAGTCTGTCTAAAGTCACCTGTGACCCAGCATGAACTCTGAGAAGAC i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7410142 62 + 22200726 TGGACCTAAACAAGATAGCCTGTCTAAAGTCACCTGTGACCCAGCATGAACTCTGAGAAGGC i proCoq1.NW_012133858v1 I 277 I 1 s otoGar3.GL873829 405825 61 - 608964 TGGACATAAACAAGAT-GCCTATCTAAAGTCACCTGTGACCCAGCATGAACTCTGAAAAGGC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29059910 57 + 31377067 TGGACTTAAACAAGATAGCCTGGCTAAAGTCACCTGTGAC--AGCACAAACACACAGGC--- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3883297 62 + 6579706 TGTCCCTAAACGAGAGAGCCTGTCTAAAGTTACCCGGGACTCAGCCCAAACTCTGAGAAGGC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=16894.000000 s hg38.chr3_KI270779v1_alt 108843 8 + 205312 -GAAACTCC s panTro5.chr3 200092477 8 + 202621043 -GAAACTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72067 8 + 190779 -GAAACTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36977 8 + 106623 -GAAACTCC i gorGor5.CYUI01000576v1 I 1 C 0 s nomLeu3.chr11 120845434 8 + 123690457 -AAAACTCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 53257 4 + 192460366 -GAAG---- i macFas5.chr2 I 11 C 0 s calJac3.chr17 917603 8 - 74750902 -GAAACTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 446425 8 + 17725628 -GAAACTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 409488 8 - 6778120 -GAAACTCC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25892319 7 - 114275543 -AAAACCC- i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 7410205 7 + 22200726 -AAAACCC- i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 405887 7 - 608964 -AAAACCC- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29059968 7 + 31377067 -AAAACAC- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3883359 8 + 6579706 AAAAAGGC- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e macNem1.NW_012014355v1 528838 15 + 19675229 I e colAng1.NW_012118932v1 437394 15 + 7796314 I e manLeu1.NW_012102020v1 558290 15 - 1977891 I e chlSab2.chr15 400928 15 - 91754291 I e cerAty1.NW_012004056v1 464916 15 + 16847902 I e rheMac8.chr2 202445418 15 + 204787373 I a score=982091.000000 s hg38.chr3_KI270779v1_alt 108851 75 + 205312 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAG---- s panTro5.chr3 200092485 75 + 202621043 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAG---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72075 75 + 190779 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAG---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 36985 75 + 106623 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAG---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845442 75 + 123690457 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTCACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAG---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445433 75 + 204787373 ATAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAG---- i rheMac8.chr2 I 15 C 0 s macFas5.chr2 53261 75 + 192460366 ATAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAG---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528853 75 + 19675229 ATAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAG---- i macNem1.NW_012014355v1 I 15 C 0 s cerAty1.NW_012004056v1 464931 75 + 16847902 ACAGCAATGAGGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAG---- i cerAty1.NW_012004056v1 I 15 C 0 s chlSab2.chr15 400943 75 - 91754291 ACAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTCCTGCCACAACCAG---- i chlSab2.chr15 I 15 C 0 s manLeu1.NW_012102020v1 558305 75 - 1977891 ACAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAG---- i manLeu1.NW_012102020v1 I 15 C 0 s colAng1.NW_012118932v1 437409 75 + 7796314 ACAGCAATGATGAAGACAATGTGGGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCTACAGCCAG---- i colAng1.NW_012118932v1 I 15 C 0 s calJac3.chr17 917611 72 - 74750902 ACAGCA---ATGAAGACAGCATGAGGTGGAACTTTTCTGCCCAGAGACCTCATCTGAAGCTTCGGCCACAGCCAG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 446433 75 + 17725628 ACAGCAGTTATGAAGACAGCATGAGGTGGGACTTTTCTGCCCAGACAGCTCATCGGAAGCTTCTGCCACAGCCAG---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 409496 74 - 6778120 ACAGCAATGATGAAGACAGCATGAGGTGGAAC-TTTCTGCCCAGAGACCTCATCCGAAGCTTCTGCCACAGCCAG---- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25892326 75 - 114275543 AGAGCTATGATGAGGCCAACGTGAGGTGGAATTTTTCTGACCAAAGTCTTCATCAGAAACCTCTGCCACAGCcag---- i micMur3.chr1 C 0 I 3613 s proCoq1.NW_012133858v1 7410212 73 + 22200726 AGAGCCATG--GAGGCCAACGTGAGGTGGAACTTTTCCTACCAGAGTCTTCATCAGAAGCCTCTGCCACAGCcag---- i proCoq1.NW_012133858v1 C 0 I 591 s otoGar3.GL873829 405894 74 - 608964 AGAGCCATGATGAGGACAACGGGA-GTGGAACTATTCTAACCAGAGTCTTCATCTGAAGCTTCAGCCACAGCCAG---- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29059975 75 + 31377067 AAGGCCGTGACGAAGACAACGTGAGGTGGGACTATTGTGACAAGAGACTTCAGCTGAAGCTCCCGCCACAGCCAG---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883367 75 + 6579706 --GGGGCGGGGGAGAGCCACACCAAGTGCAACTT-TCTGACAAGAGGCTCCAACTGAA-CTTCTGCCACAACCTGTCAG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=523783.000000 s hg38.chr3_KI270779v1_alt 108926 55 + 205312 TCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAAAGCATTTG s panTro5.chr3 200092560 55 + 202621043 TCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAAAGCATTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72150 55 + 190779 TCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAAAGCATTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37060 54 + 106623 TCCTGCCTTCATCCCTTGAG-GGGG------------------GATTGGCCACCAAAGTATGCAAAGCATTTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845517 55 + 123690457 TCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAGAGCATTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445508 55 + 204787373 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 53336 55 + 192460366 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528928 55 + 19675229 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 465006 55 + 16847902 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401018 55 - 91754291 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558380 55 - 1977891 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCGCCAAATTATGCAAAGCATTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437484 55 + 7796314 TCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 917683 53 - 74750902 TCCTGCCTTCATCCTTTGTGAGGGG-------------------ACTGGCCACCAAATTATACAAAGCA-GTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 446508 53 + 17725628 TCCTGCCTTCATCCTTTGGGAGGGG-------------------ACCGGCCGCCAAATCATGCAAAGCA-GTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 409570 53 - 6778120 TCCTGCTTTCATCCTTTGTGAGGGG-------------------ACCGGCCACCAAATTATGCACAGCA-GCG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 405968 54 - 608964 TCCTTCCCTCATTTCTGGTGAAGAG------------------GAATGGCCACCACCTTGTGGAAAGCA-GTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29060050 72 + 31377067 TCCTTTGTTCAACCTCTGTAAggggcggggggggggcgggggggggccgccACCAGTGAGTGGAAAGCA-CTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3883442 52 + 6579706 TCCTTTCTTCATCCCTCGTGAGAGG------------------ACTTGGCCACCCATTTGTG---AGCAGTTG i dasNov3.JH569502 C 0 I 1738 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=923912.000000 s hg38.chr3_KI270779v1_alt 108981 106 + 205312 AATGGAAACGAATTCCGTGGGTGCGCCCCACACTTTAAT-AGTGGCCATCA-TATCACTTTCTGGTGCCAGTAAATGCGTAAAGGGGTGCATCATGCCAGTGACCTAT s panTro5.chr3 200092615 106 + 202621043 AATGGAAACGAATTCCGTGGGTGCGCCCCACACTTTAAT-AGTGGCCATCG-TATCACTTTCTGGTGCCAGTAAATGCGTAAAGGGGTGCATCATGCCAGTGACCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72205 106 + 190779 AATGGAAACGAATTCCGTGGGTGCGCCCCACACTTTAAT-AGTGGCCATCG-TATCACTTTCTGGTGCCAGTAAATGCGTAAAGGGGTGCATCATGCCAGTGACCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37114 107 + 106623 AATGGAAACGAATTCCATGGGTGTGCCCCACACTTTAAT-AGCGGGCATCATTATCACTTTCTGGTGCCAGTAAATGCGTAAAGGGGTGTATCATGCCAGTGACCTAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845572 106 + 123690457 AATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAAT-CGTGGGCATCA-TATCACTTTCTGGTGCCAATAAATGCGTAAAGGGGTATATCATGCCAGTGACCTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445563 107 + 204787373 AATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAATGAGTGGACAGCA-TGTCACTTTCTGGTGCCAATAAATGCGTAAAGGTGTGTATCATGCCAGTTACCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 53391 107 + 192460366 AATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAATGAGTGGACAGCA-TGTCACTTTCTGGTGCCAATAAATGCGTAAAGGTGTGTATCATGCCAGTTACCTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 528983 105 + 19675229 AATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAATGAGTGGACAGCA-TGTCACTTTCTGGTGCCAATAAATGC--AAAGGTGTGTATCATGCCAGTTACCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 465061 107 + 16847902 AATGGAAACAAGTTCCATGGGTGTGCCCCACACTTTAATGAGTGGACAGCA-TGTCACTTTCTGGTGCCAATAAGTGCGTAAAGGTGTGTATCATGCCAGTTACCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401073 107 - 91754291 AAAGGGAACAAATTCCATGGGTGTGCCCCACACTTTAATGTGTGGGCAGCA-TGTCACTTTCTGGTGCCAATAAATGTGTAAAGGTGTGTGTCATGCCAATTACCTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558435 107 - 1977891 AATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAATGAGTGGATAGCA-TGTCACTTTCTGGTGCCAATAAATGCGTAAAGGTGTGTATCATGCCAGTTACCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 437539 107 + 7796314 AATGGAAACAAATTCCATGGATGTGCCCCACACTTTAATGAGTGGGCAGCA-TGTCACTTTCTGGTGCCAATAAATGCATAAAGGTGTGTATCATGCCAGTTACCTAT i colAng1.NW_012118932v1 C 0 I 1504 s calJac3.chr17 917736 107 - 74750902 AATGGACGTACATTCCATGGGCACGCCCCATACCTTCATGAGTGGGCGGCA-CACCACTTTCTGGTGCCAGTAAATGCTTGAAGGGGCATATCACGCCAGTTACCTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 446561 107 + 17725628 AATGGACGCCAATTCCATGGGCATGCCCCGCACCTTCATGAGTGGGCAGCA-TACCACCTTCTGGGGCCAGTAAATGCTTAAAGGGGCATATCATGCCAGTTATCTAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 409623 107 - 6778120 AATGGACGCGAATTCCGTGCGCATGCCCTGCACCGTCATGAGTGGGCAGTA-CACCACTTTCTGGTCCCAGTAAGTGCCTAAAGGGGCACATCATGCCAGTTACCTAT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406022 101 - 608964 AATGGTAACAAATTCTGTGGGCATGCTGCACATTTAAATGAATGGGCATCA--ATCACTCTCTGGTATCCATGTTTAGTTGA-----TGTAGCACTCCAGTTATCTAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29060122 102 + 31377067 AATGGCAACTGATCCCACGGGTGTACCCCAAATTCAAATGAGTGGGCGTCA-T-----TTTTTGGCATCAATAAATGTTTACATTGGTCTACGATGCCAGTTATCCAT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=2749289.000000 s hg38.chr3_KI270779v1_alt 109087 328 + 205312 CACTCATCATCCCAGTCATTA--AGCCACTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCCAGATAGCTCCTTTTGCCACT--CTCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------AGCAGGGGTCGGGG-GTCTGCACCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCC---TGGGG--------AAGGGTCAGTCAGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACTTGTAGCCAGGGAATGAGCTGACGAAAATGGATGGT s panTro5.chr3 200092721 331 + 202621043 TACTCATCATCCCAGTCATTA--AGCCACTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCCAGATAGCTCCCTTTGCCACT--CTCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------AGCAGAGGTCGGGG-GTCTGCACCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCCCCATGGGG--------AAGGGTCAGTCAGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACTTGTAGCAAGGGAATGAGCTGACGAAAATGGATGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72311 331 + 190779 TACTCATCATCCCAGTCATTA--AGCCACTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCCAGATAGCTCCCTTTGCCACT--CTCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------AGCAGGGGTCGGGG-GTCTGCACCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCCCCATGGGG--------AAGGGTCAGTCAGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACTTGTAGCAAGGGAATGAGCTGACGAAAATGGATGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37221 328 + 106623 TACTCCTCGTCCCAGTCATTA--AGCCACTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCCAGATAGCTCCCTTTGCCACT--CTCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------AGCAGGGGCCGGGG-GTCTGCAGCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCC---TGGGG--------AAGGGTCAGTCAGTTATTTTATTCCAGGGGCCGAAGCGACAGAATCCAGACCACTTGCAGCCAGGGAATGAGCTGATGAAAATGGATGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120845678 336 + 123690457 TACTCATCATCCTAGTCATTA--AGCCACTTACTTCAGGCCTACGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGCACAAGGGAGTCTGTGTCTTTGGCCAAGCTTCACCCCAGATAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------TGCAGGGGATGGGG-GTCTGCGCCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCC---TGGGAAGTTTGCTAAGGGTCAGTCTGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACCTGTAGCCAGGGAATGAGCTGACGAAAATGGATGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445670 329 + 204787373 TACTCATTATCCTAGTCATTA--AGCCACTTACTTCAGGCCTGCAGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGAGAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCGCCCTTATTTCTTCCAAGCAAAATCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 53498 329 + 192460366 TACTCATTATCCTAGTCATTA--AGCCACTTACTTCAGGCCTGCGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGAGAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCGCCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 529088 329 + 19675229 TACTCATTATCCTAGTCATTA--AGCCACTTACTTCAGGCCTGCAGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGAGAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCGCCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 465168 329 + 16847902 TACTCATTATCCTAGTCGTTA--AGCCACTTACTTCAGGCCTGCGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGATAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCACCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGAGGAAAATGGATGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401180 328 - 91754291 TACCTATTATCCTAGTCATTA--AGCCACTTACTTCA-GCCTACGGGGAGTTTCTGGAAGGCTTCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCTAGATAGCTCCCTTTGCCACT--CCCGAGTCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCACCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558542 329 - 1977891 TACTTATTATCCTAGTCATTA--AGCCATTTACTTCAGGCCTGCGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGATAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCACCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGATGAAAATGGATGGT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 917843 325 - 74750902 TACTCATCATCCTGGTCATTA--AGCCCCTGACTTCA-GCCTGTGGGGAATTTCTGGAAGGCTCCTTCAAGAGCAGGGAAGAAGGGGCAAGGGAATTTGTGTCTCTGGTCGCGCTTTGTCCCAGATG---------GCCACT--GCTGAGCCCACTGAAGGTGTTCCAGCTGCCTGCCACCAGGAAGAGCAGGAGACAGGG-GTCCGCGCTCTTCTCTCTGCCAAGCAAACTCATGCCTGGCACCC---TGGAG--------AAGAGCCAGTCAGTTCTTTCATTCCA-GGCCCAAAGTGACAGAATCCAGAGCACTCAGAACCAGGGAGTATGCTGAGGAAAACGCATGGT i calJac3.chr17 C 0 I 316 s saiBol1.JH378146 446668 323 + 17725628 TACCCATCATCCTGGTCATCA-------CTTACTTCAGGCCGGCGGGGAGTTTCTGAAAGGCTCCTTCAAGAGCAGGGAAGAATGGGCAGGGGAATCTCTGTCTCTGGCCAAGCTTTGTCCCAGATAGCTCCCTTTGCCACT--CCTGAGCCCACTGAAGGTGTTCCAGCTGCCTGCCACC------AGCAGGGGACAGGG-GTCTGCGTCCTTCTCTCTGCCAAGTAGACTCATACCTGGCACCC---TGGAG--------AAGAGCTGGTCAGTTCTTTTATTCCA-GGCCCAAAGGGACAGAACCCAGACCACTCAGAGCCAGGGAGTAAGCTGAGGAAGACGCGTGG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 409730 328 - 6778120 CACTCATCATCCTGGTCATGA--AGCCGCTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTCCAGAGCAGGGAAGAATGAGCAAGGGAATCTGTGTCTCTGGCCAAACTTTGTCCCAGATAGCTCCCTTTGCCACT--CCTGAG-CCACTGAAGGTGTTCCAGCTGCCTGCCACC------AGCAGGGGACAGGG-GTCTGCACCCTTCTCCCTGCCAAGCAAACTCATGCCTGGCACCC---TGGAG--------TAGAGTTGGTCAGTTATTTTATTCCA-GGCTCAAAGTGACAGAATCCAGACCACTCAGAGCCAGGGAGTAAGCTGAGGAAAACGCACGGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406123 327 - 608964 TATTTGTCATTCTGGTCATTA--AGCTCCTTACCTAAGACCCACAGGGAGTTTCTGGAAGGCTCCTTTGAGAGCAGGGAAGAATGCACCAGGGAATCTGTGTCTATGGCTAAGTATTGTCCCAGACAGCT-CGTTGGCCTCC--CCAGTGTCCACCAAAGGTGTCTCACCTG-CTGCCACT------AGTAGGGGATGAGG-GCCTGCTCCCTTTTCTCTGCCCAGAAAACTCACACCTGGCACCC---TGGGG--------CAGGGCCAGTTAGCTATTT-ATTCCAGGTGCCAAAGTGGCAGAATCCAAACCATACAGAGCAAGGGACTGAGCTGATGAAAATGTGCAGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29060224 293 + 31377067 TGTTTGCTATCTTGGTCTTTAAAAGCTGCTCATCTTAAGCTCATGGGGATTTTCTGGAAGGTTCCTTGGAGAACAGGGAAGTATAAGCA----------TGTCT----------------CCAGACAGCTCCCTTTAAGGGTGCCCCGGGCCCACTGAGGGTGTTTCAACTGCCTG-CACC------AACTGGGAATGGGGTGGAGGCTTCTCCCCCTCTGCCAGGCTAACACGGGCCTGGAACCC---TGAAG--------AAGGGTCCATCAGTTCTTC-ATTCTAGGTGCATAAGCAGCAGAATCCACATCACACAGATTCGGCGGGTGGGCTGA-------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=296506.000000 s hg38.chr3_KI270779v1_alt 109415 48 + 205312 TGTGTCCTTGTCCTTCTGACTGTCCCACTCGTGAAGGGGCAGCTCCCT s panTro5.chr3 200093052 48 + 202621043 TGTGTCCTTGTCCTTCTGACTGTCCCACTCGTGAAGGGGCAACTCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72642 48 + 190779 TGTGTCCTTGTCCTTCTGACTGTCCCACTCGTGAAGGGGCAACTCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37549 47 + 106623 TGTGTCCTTGTCCTTCTAACTGTCCCACTCGTGAAGGGGCAGCT-CCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846014 48 + 123690457 TGTGTCCTTGTCCTTCTAACTGTCCCACTTGTGAAGGGGCATCTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202445999 39 + 204787373 TGTGTTCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 53827 39 + 192460366 TGTGTTCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 529417 39 + 19675229 TGTGTTCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 465497 35 + 16847902 TGTGTCCTTGTCC----AACTGTCCCACTCATGAAGGGG--------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401508 39 - 91754291 TGTGTCCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558871 39 - 1977891 TGTGTCCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 918484 48 - 74750902 TGTGCCCATGTCCTTCTAACTGTCCCACTCATGAAGGGGCAGCTCCCT i calJac3.chr17 I 316 C 0 s saiBol1.JH378146 446991 47 + 17725628 TGCACCCTTGTCC-TCTAACTGTCCCACTCATGAAGGGGCAGCTCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410058 48 - 6778120 TGCGAACTTGTCCTTCGAACTGTCCCACTCATGAAGGGGCAGCTCCCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406450 44 - 608964 TATGTCCTT---TATCTAACTGCATCACTCAT-AAGGGACACCCTCCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29060517 34 + 31377067 --------------TCTGACTGCACCACTCACCAAGAGGCCTTTCCTT i canFam3.chr33 C 0 I 669 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=1289034.000000 s hg38.chr3_KI270779v1_alt 109463 164 + 205312 GTCCAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTT-GGGACGCCTCCTCCTCCCGTGCTGTCAGGGCCTCAGCGGCTTTGACTGGGCTCACCA-AGaaaacacagaacagccacttaaatgagaacctcggataaacggtgaacacttaaaaatatac s panTro5.chr3 200093100 164 + 202621043 GTCCAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTC-GGGACGCCTCCTCCTCCCGTGCTGTCAGGGCCTCAGCGGCTTTGACTGGGCTCACCA-AGaaaacacaggacatccacttaaatgagaacctcagataaacggtgaacacttaaaaatatac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72690 164 + 190779 GTCCAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTC-GGGACGCCTCCTCCTCCCGTGCTGTCAGGGCCTCAGCGGCTTTGACTGGGCTCACCA-AGaaaacacaggacatccacttaaatgagaacctcagataaacggtgaacacttaaaaatatac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37596 164 + 106623 GTCCAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTT-GGGACGCCTCCTCCTCCCGTGCTGTCAGGGCCTCAGAGGCTTTGACTGGGCTCACCA-AGaaaacacaggacatccacttaaatgagaacctcggataaacggtgaacacttaaaaatatac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846062 163 + 123690457 GTCCAGCTAGAGAAGGGTGTC-CCCAGGTGCCTTCTCCTTTCCC--GGACGCCTCCTCCGCCCATGCAGTCAGGGCCTCAGCGGCTTTGACTGGGCTCAACA-AGaaaacacaggacgcccagttaaattagaacctcagataaatgatgaacacttaaaaatagac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446038 161 + 204787373 ---CAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTT-GGGACGCCTCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCA-AGaaaacacaggacgtccagttaaatgagaacctcagataaacgatgaacacttAAAAATATAC i rheMac8.chr2 C 0 I 183 s macFas5.chr2 53866 161 + 192460366 ---CAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTT-GGGACGCCTCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCA-AGaaaacacaggacgtccagttaaatgagaacctcagataaacgatgaacacttAAAAATATAC i macFas5.chr2 C 0 I 183 s macNem1.NW_012014355v1 529456 161 + 19675229 ---CAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCTT-GGGATGCCTCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCA-AGaaaacacaggacgtccagttaaatgagaacctcagataaacgatgaacacttAAAAATATAC i macNem1.NW_012014355v1 C 0 I 180 s cerAty1.NW_012004056v1 465532 161 + 16847902 ---CAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCTTTTCCT-GGGACGCCTCTTCCTCCCATGCAGTCAGGGCTTCAGTGGTTTTGACTGGGCTCACCA-AGaaaacacaggatgtcctgttaaatgagaacctcagataaacgatgaacacttaaaaatatac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401547 161 - 91754291 ---CAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCCTTTCCT-GGGACGCCCCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCA-AGaaaacccaagatgtccagttcaatgagaacctcagataaacgatgaacacttaaaaatatac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 558910 161 - 1977891 ---CAGCTAGAGAAGGGTGTC-CCCAGGTGCCCTCTCTTTTCCT-GGGATGCCTCTTCCTCCCATGCAGTCAGGGCCTCAGTGCCTTTGACTGGGCTCACCA-AGaaaacacaggatgtccagttaaatgagaacctcagataaacgatgaacacttaaaaatatac i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 918532 162 - 74750902 GTCCAGCTAGAGGAGGGTGTT-CCCCGGTGCCCTCTCCCTTCCT-GTGATGTCTCCTCCTCCCTCACAGTCAGGGCCTCAGCAGCTTTGACTgggttcacca-agaaaacacaggacgtccagttaaattagaaccttggataaatgacggacacttaaaaacac-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447038 162 + 17725628 GTGCAGCTAGAGAAGGGTGTC-CCCAGGCGCCCTCTCCTTTCCT-GTGACGTCTCTTCCTCCCTCGCAGTCAGGGCCTCAGTAGCTTTGACTGGGCTCACCA-AGaaaacagaggacgtccagttaaattagaaccttggataaatgacgaacacttaaaaacac-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410106 161 - 6778120 GTCCAGCTAGAGAAGGGTGTC-CCCAGGTG-CCTCTCCTTTCCC-GTGACGCCTCCTCCTCCCTCGCAGTCAGGGCCTCAGTAGCTTTGACTGGGCTCACCA-AGaaaacacagggtgtccagttaaattagagccttggataaatgatgaacacttaaaaacac-- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406494 162 - 608964 GCCCAGCCAGAGAAGGGTGTCACCCATCTGCCATCTTCCTTCTTCATGACACCTCCTTTTCCTATACTGTCAACGCCTTAGCTGTTTTGACtaggatcaccagataaaatacaggacatccagttaaattagaatttcagatgaacaatgaatactttaaaa----- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=897654.000000 s hg38.chr3_KI270779v1_alt 109627 122 + 205312 aagaatgttccaaatagttcatgggatatctttaaactaaaacaattatttgtggttaatctgaaattta-----agctgggctgcttgtattttcatttgctaaattggacagccctaCtttc----------att s panTro5.chr3 200093264 119 + 202621043 aagaatgttccaaatagttcaggggatatctttaaactaaaacaattatttgtggttaatctgaaattta-----aactgggctgcttgtattttcatttgctaaattggacagccctaCtttc------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72854 122 + 190779 aagaatgttccaaatagttcaggggatatctttaaactaaaacaattatctgtggttaatctgaaattta-----aactgggctgcttgtattttcatttgctaaattggacagccctaCtttc----------att i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37760 114 + 106623 aagaatgttccaaatagttcatgggatatctt-----taaaacaattatttgtggttaatctgaaattta-----agctgggcttcttgtattttcatttgctaaattggacagccctaCtttc------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846225 132 + 123690457 aagaatgttccagatagttcatgagatatctttaaactaaaacaattatttgtggttaatctgaaattta-----agcttggcttcttgtattttcatttgctaaattggacagccctaCTTTttattattattgtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446382 122 + 204787373 aagaatgttccaaatagttcatgggatgtctttacactaaaacaattatttgtggttaatccgaaattta-----agctgagcttcctacattttcatttgctaaatcggacagccctaCtttt----------att i rheMac8.chr2 I 183 C 0 s macFas5.chr2 54210 122 + 192460366 aagaatgttccaaatagttcatgggatgtctttacactaaaacaattatttgtggttaatctgaaattta-----agctgagcttcctacattttcatttgctaaatcggacagccctaCtttt----------att i macFas5.chr2 I 183 C 0 s macNem1.NW_012014355v1 529797 122 + 19675229 aagaatgttccaaatagttcatgggatgtctttacactaaaacaattatttgtggttaatctgaaattta-----agctgagcttcctacattttcatttgctaaatcggacagccctaCtttt----------att i macNem1.NW_012014355v1 I 180 C 0 s cerAty1.NW_012004056v1 465693 122 + 16847902 aagaatgttccaaatagttcatgggatatctttaaactaaaacaattatttgtggttaatctgaaattta-----agctgagcttcctacattttcatttgctgaatcggacagccctaCtttt----------att i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401708 122 - 91754291 aagaatgttccaaatagttcatgggatatctttaaactaaaacgattatttgtggttaatctgaaattta-----agctgagcttcccatattttcatttgctaaatcggacagccctaCtttt----------att i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 559071 122 - 1977891 aagaatgttccaaatagttcatgggatacctttaaactaaaacagttatttgtggttaatctgaaattta-----agctgagcttcctacattttcatttgctgaatcggacagccctaCtttt----------att i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 918694 121 - 74750902 aggaacgtccgaaatggttcatgggatgtctttatactaaaccagttatttgtggttaatctgaaattta-----agctggcc-tcctgtattttcatttgctgaatcagacagccttaCtttt----------att i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447200 121 + 17725628 aagaatgtcc-aaatggttcatgggatatctttatagtaaaccaattatttgtgattcatctgaaattta-----agctggccttcctgtattttcatttactaaatcagacagccttaCTTTT----------ATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410267 122 - 6778120 aagaatgtccaaaatggttcatgggatatctttatagtaaaccaattatttgtgattaatctgaaattta-----agctggccttcctgtattttcatctgctaaatcagacagacttaCtttt----------att i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406656 107 - 608964 -----------aaat--ttcatgggacatccttatgctaaaaaaat--tttgtggtttatgtaaaatttaattttaactgggcatcttatatct-----tgctaaatccgacaaccctaCTTTT----------AAT i otoGar3.GL873829 C 0 I 46 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=1804149.000000 s hg38.chr3_KI270779v1_alt 109749 265 + 205312 attattattattattattatt-gagacccagtctcactctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaagctccgcctcctggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtgtgcgccaccacgcccagctaatttgttatatttttggtagaaacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgacttgcctgcctcggcctccca s panTro5.chr3 200093383 265 + 202621043 attattattattattattatt-gagaccgagtctcactctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaagctccgcctcctggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtgtgcgccaccacgcccagctaatttgttatatttttggtagaaacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgacttgcctgcctcggcctccca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 72976 265 + 190779 attattattattattattatt-gagaccgagtctcactctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaagctccgcctcctggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtgtgcgccaccacgcccagctaatttgttatatttttggtacaaacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgacttgcctgcctcggcctccca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 37874 265 + 106623 attattattattattattatt-gagaccgagtctcgctctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaagctccgcctcctggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtgtgtgccaccacgcccagctaatttgttatatttttggtagaaacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgacttgcctgcctcggcctccca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846357 265 + 123690457 attattattattattattatt-aagaccgagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcagctcactgcaagctccgcctcccggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtatgtgccaccacgcccagctaattttttatatttttggtagaaacggggtttcaccatgttggtcaggctggtcttgaactcctggcctcaggtgacctgcctgcctcggcctccca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446504 265 + 204787373 atttttgtttgtattttattt-gagaccgagtctcgctctgtctcccaggctggagcacagtggtgccaactgggctcattgcaaccatcacctcctgggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccaagcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcagcctccca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54332 265 + 192460366 atttttgtttgtattttattt-gagacggagtctcgctctgtctcccaggctggagcgcagtggtgccaactgggctcattgcaaccatcacctcctgggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccaagcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcggcctccca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 529919 265 + 19675229 atttttgtttgtattttattt-gagaccgagtctcgctctgtctcccaggctggagcgcagtggtgccaactgggctcattgcaaccatcacctcctgggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccaagcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcggcctccca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 465815 265 + 16847902 atttttgtttttattttattt-gagactgagtctcgctctgtcacccaggctggagtgcagtggtgccaactcggctcattgcaaccatcgcctcctgggttcaagggagtctcctgtctcagccacccgagtagctcggattacaggtgtgtgccaccaagccccgctaattttttatatttttggtggagacagggtttccccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcggcctccca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 401830 265 - 91754291 atttttgtttttattttattt-gagactgagtctcgctctgttgcccaggctggagtgcagtggtgccaacttggctcattgcaaccatagcctccgaggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccacgcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcagcctccca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 559193 265 - 1977891 atttttgtttttattttattt-gagactgagtctcgctctgtcgcccaggctggagtgcagtggtgccaacacggctcattgcaaccatcgcctcccaggttcaagggagtctcgtgtctcagcctcccaagtagctcggattacaggtgtgtgccaccaggcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgatctctggtgattcgcctgcctcggcctccca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 918815 259 - 74750902 agt-------ttatttttttttaagccggagtctcactctgtcgcccaggctggagtgtagtggcaccatcttggctcactgcaacctctgcctcccaggttcaagggaccctcctgactcaacctcctgagtagctgggactacaggcgtgcgtcaccacccctggctagttttttatatttttggtagagatggggtttcatcgtgctggtcaggctggtctcaaactcctgacttcaggtgatccacctgcctcggtctccca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447321 235 + 17725628 AGt-------ttatttttttt---gacggagtctcactc--tcgcccaggctggagtgtagtggcaccatctcggctcactgcaacctctgcctcccggggtcaagggattctcctgtctcagccgcctgagtggctgggactacaggcatgcgccaccacccctggctaattttttatatttttggtggagatggggtttcaccatgttggtcagtctggtctcaaa-------------------cacctgcctcggtctccca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410389 258 - 6778120 agt-------ttatttttttt-gagatgaagtctcgctctgtcgccctggctggagtgtagtggcgccatctcagctcactgcaacctccgcctcccgggttcaagggattctcctgtctcagcgtcctgagtagctgggactacaagcgtgcgccaccacccctggctaattttttatattttcagtggagatggggtttcaccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggtctccca i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 406763 46 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=197999.000000 s hg38.chr3_KI270779v1_alt 110014 23 + 205312 aagtgctgggattacaggtgtga s panTro5.chr3 200093648 23 + 202621043 aagtgctgggattataggtgtga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73241 23 + 190779 aagtgctgggattataggtgtga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38139 23 + 106623 aagtgctgggattataggtgtga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846622 23 + 123690457 aagtgctgggattataggtgtga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446769 23 + 204787373 aagtgctgggattataggcgtga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54597 23 + 192460366 aagtgctgggattataggcgtga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 530184 23 + 19675229 aagtgctgggattataggcgtga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466080 23 + 16847902 aagtgctgggattataggcgtga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402095 23 - 91754291 aagtgctgggattataggcgtga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 559458 23 - 1977891 aagtgctgggattacaggcgtga i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 919074 23 - 74750902 aagtgctgggattataggcgtga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447556 23 + 17725628 aagtgctgggattacaggcgtga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410647 23 - 6778120 aagtgctgggattacaggcatga i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406809 23 - 608964 AGGAGATGGGGACACTGGTGTGA i otoGar3.GL873829 I 46 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=136210.000000 s hg38.chr3_KI270779v1_alt 110037 18 + 205312 gccaccacacctggccCA s panTro5.chr3 200093671 18 + 202621043 gccaccacacctggGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73264 18 + 190779 gccaccacacctggGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38162 18 + 106623 gccaccacacctggccCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846645 18 + 123690457 gccaccgcacctggccCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446792 18 + 204787373 gccaccgcacctggccCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54620 18 + 192460366 gccaccgcacctggccCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 530207 18 + 19675229 gccaccgcacctggccCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466103 18 + 16847902 gccaccgcacctggccCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402118 18 - 91754291 gccaccgcacctggccCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 559481 18 - 1977891 gccaccgcacctggccCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 919097 18 - 74750902 gccaccatgcctggccTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447579 18 + 17725628 gccacctcgcctggccCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410670 18 - 6778120 gccaccatgcctggccCA i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 406832 0 - 608964 C e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3883494 1738 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=637142.000000 s hg38.chr3_KI270779v1_alt 110055 87 + 205312 GACAGCCCTACTTTTAATGCATCCTCTCCCACGAGGGTCCCTGGCTCCTCTCTTCCGTCCAATCTGCGGGTCTCCTTCAGGGGTAGC s panTro5.chr3 200093689 87 + 202621043 GACAGCCCTACTTTTAATGCATCCTCTCCCACGAGGGTCCCTGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCAGGGGTAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73282 87 + 190779 GACAGCCCTACTTTTAATGCATCCTCTCCCACGAGGGTCCCTGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCAGGGGTAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38180 87 + 106623 GACAGCCCTACTTTTAATGCATCCTCTCCCACGAGGGTCCCTGCCTCCTCTCTTCCCTCCAATCTGTGGGTCTCCTTCAGGGGTAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846663 87 + 123690457 GACAGCCCTACTTTTAAGGCATCCTCTCCCACCAGAGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCAGGGGTAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446810 86 + 204787373 GACAGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54638 86 + 192460366 GACAGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 530225 86 + 19675229 GACAGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466121 86 + 16847902 GACAGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGCATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402136 86 - 91754291 GACAGCCCTACTTTTAATGCACCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 559499 86 - 1977891 GACAGCCCTACTTTTAATGCATCGCCTCCCATCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 919115 87 - 74750902 GAAAGCCCAACTTTTCATGTATCCTCTCCCACCAGGCTCCCCACCTCCTCTTTTCTCTCCAATCTGCAGGGCTCCTTCAGCGGTAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447597 87 + 17725628 GAAAGCCCTTCTTTTCATGTATCCTCTCCCACCAGGGTCCCCACCTCCTCTCTTCTCTCCAATCTGCAGGGCTTCTTCAGTGGTAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410688 87 - 6778120 GAAAGCCCTACTTTTCATGTATCCTCTCCCACCAGGGTCCCCACCTCCTCTTTTCTCTCCAATCTGCAGGGCTCCTTCAGCGGTAGC i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3885232 68 + 6579706 GACAACCCTA-TTTTAATGCTTCCTTTCCCACCAGTGCCCCCACTTGGTGACTTTCCTTCAATT------------------GTAGC i dasNov3.JH569502 I 1738 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 406832 0 - 608964 C e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=1358518.000000 s hg38.chr3_KI270779v1_alt 110142 191 + 205312 AAGCTCCCAGCCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCAAACACAGGCTCTGTCCTCCCGCT--CCCTCCATTGCTTA--------------------GTGTG-TGAAGGTGGACA------GGGGAGGAGGGACCTTGGGTTTGGGGCGGTTC-TGCTCCCCACTCGCTGCTTTGCTTTTGCTCTTTCTGGTTTCCT s panTro5.chr3 200093776 191 + 202621043 AAGCTCCCAACCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCAAACACAGACTCTGTCCTCCCGCT--CCCTCCATTGCTTA--------------------GTGTC-CGAAGGTGGACG------GGGGAGGAGGGACCTTGGGTTCGGGGCGGTTC-TGCTCCCCACTCGCTGCTTTGCTTTTGCTCTTTCTGGTTTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73369 191 + 190779 AAGCTCCCAACCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCAAACACAGACTCTGTCCTCCCGCT--CCCTCCATTGCTTA--------------------GTGTC-CGAAGGTGGACG------GGGGAGGAGGGACCTTGGGTTTGGGGCGGTTC-TGCTCCCCACTCGCTGCTTTGCTTTTGCTCTTTCTGGTTTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38267 191 + 106623 AAGCTCCAAACCTTCTCCCAGGTACTGGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCAAACACAGACTCTGTCCTCCCGCT--CCCTCCATTGCGTA--------------------GTGTC-CGAAGGTGGACG------GGGGAGGAGGGACCTTGGGTTTGGGGCGGTTC-TGCTCCCCACCCGCTGCTTTGCTTTTGCTCTTTCTGGTTTCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846750 179 + 123690457 AAGCTCCCAGCCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGGGCTGTCCATCACACACAGACTCTGTCTTCCCGCT--CCCTCCATTGGTTA--------------------GTGTC-CGAAGATGGACG------GGGGAGGAGGGCCCTTGGGTTTGGGGCGGTTC-TGCTCCCCACTCGCCGCTTTGCTTTTGCTCT------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202446896 190 + 204787373 AAGCTCTCAACCTCCCCCCACGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCT--CCCTCCATTGCTCA--------------------GCGTC-GGAAG-TGGACG------CGGGAGGACGGACCTTGGGTTTGGGGCAGCTC-TGCTCCCCACTCACCACTTTGCTTTTGCTCTTTCCGGTTTCCC i rheMac8.chr2 C 0 I 2 s macFas5.chr2 54724 190 + 192460366 AAGCTCTCAACCTCTCCCCACGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCT--CCCTCCATTGCTCA--------------------GCGTC-GGAAG-TGGACG------GGGGAGGACGGACCTTGGGTTTGGGGCAGCTC-TGCTCCCCACTCACCACTTTGCTTTTGCTCTTTCCGGTTTCCC i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 530311 190 + 19675229 AAGCTCTCAACCTCCCCCCACGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCT--CCCTCCATTGCTCA--------------------GCGTC-GGAAG-TGGACG------GGGGAGGACGGACCTTGGGTTTGGGGCAGCTC-TGCTCCCCACTCACCACTTTGCTTTTGCTCTTTCCGGTTTCCC i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 466207 190 + 16847902 AAGCTCTCAACCTTCCCCCAGGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCT--CCCTCCATTGCTCA--------------------GTGTC-GGAAG-TGGACG------GGGGAGGACGGACCTTGGGTTTGGGGCAGCTC-TGCTCCCCACTCGCCACTTTGCTTTTGCTCTTTCCGGTTTCCC i cerAty1.NW_012004056v1 C 0 I 425 s chlSab2.chr15 402222 188 - 91754291 ACGCTCTCAACCTCCCCCCAGGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTC--TCTTCTCGCT--CTCTCCATTGCTCA--------------------GTGTC-GGAAG-TGGACG------GGGGAGGACGGACCTTGGGTTTGGGGCAGCTC-TGCTCCCCACTCGCCACTTTGCTTTTGCTCTTTCCGGTTTCCC i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 559585 190 - 1977891 AAGCTCTCAACCTTCCCCCAGGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCT--CCCTCCATTGCTCA--------------------GTGTG-GGAAG-TGGACC------GGGGAGGACGGACCTTGGGTTTGGGGCAGCTC-TGCTCCCCACTCGCCACTTTGCTTTTGCTCTTTCCGGTTTCCC i manLeu1.NW_012102020v1 C 0 I 2 s calJac3.chr17 919202 198 - 74750902 AAGCCCCCATCATTCTCCCAGGCACTGCATCTCTTGTCTGCTTCGGGAGA-----------ACACACGAACTCCGTCCTCCTGCT--TCCTCCATTGCACAGTGGCAGCAGGGGAAGCT--GTGTC-TGAAGATGGACG------GGGGAGGAGGGACCTTGGGTTTGGGGCGGGCC-TGCTTCCCGTTTGCCACTTTGCTTTTGCTCTTCCTGGTTTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447684 198 + 17725628 AAGCCCCCATCATTCTCCCTGGCACTGGATCTCTTGTCTGCTTCGGGAAA-----------ACACATGAACTCTGTCCTCCCGCT--TCCTCCATGGCTCAGTGG-AGCAGGGGAAGCTCAGTGTC-TGAAGATGGAT-------GGGGAGGAGGAGCCTTGGGTTCGGGGCGGGCC-TGCTTCCTACTTGCCACGTTGCTTCTGCTCTTCCTGGGTTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410775 198 - 6778120 AAGTCCCCATCATTCTCCCTGGCGTTGGATCTCTTGTCTTCTTTGGGAGA-----------ACACACAAACTCCGTCCTCCCGCT--GCCTCCATTGCTCAGTGGGAGC-GGGGAAGCTTAGTGCC-TGCAGATGGACG------GGGGAGGAGGGACTTTGGGTTTGGGGC-GGCC-TGCTTCCCATTTGCCGCTTCGCTTCTGCTCTTCCTGGTTTCCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 406832 174 - 608964 AAGCCCCCTATCCTTTCTCAGGCATTGGACATCTCCAGTGCTTCCTCCAGAGTTGTCCATCACACATAAACCCTGTCTTCCTGTT--CCCTGCATTGCTCA--------------------GTGGGAGGAAGATGCATG------AGAGAAGAAGGACTTTG-------------------CCCCCATCTGCCACCTTCCTTTTGTTCTTTCTGTTTTTCC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3885300 194 + 6579706 AGGCCCTCAGTGTCCTCGTAGGTTTGGGACATCTTCCCTGCCTCTGGCAG-TTTGTCTGTCACATACA----TTGTCTTTCCGCCCACCCTCCATTGCTCA--------------------GTGCC-AGGAG-AGGAAACTTAGCAAGGAGGAGGAACTTCAGGTTAGGGGTGGCCCTTGCTCCCCACTTGTTGCCTTGCCTTAGTTCCTTCTGGTTTCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I a score=2997.000000 s hg38.chr3_KI270779v1_alt 110333 1 + 205312 T s panTro5.chr3 200093967 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73560 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38458 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846929 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 919400 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447882 1 + 17725628 T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410973 1 - 6778120 T i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 407006 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3885494 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e macNem1.NW_012014355v1 530501 2 + 19675229 I e colAng1.NW_012118932v1 437646 1504 + 7796314 I e manLeu1.NW_012102020v1 559775 2 - 1977891 I e chlSab2.chr15 402410 2 - 91754291 I e cerAty1.NW_012004056v1 466397 425 + 16847902 I e macFas5.chr2 54914 2 + 192460366 I e rheMac8.chr2 202447086 2 + 204787373 I a score=115289.000000 s hg38.chr3_KI270779v1_alt 110334 12 + 205312 TCTCCGCAGTTG s panTro5.chr3 200093968 12 + 202621043 TCTCTGCAGTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73561 12 + 190779 TCTCTGCAGTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38459 12 + 106623 TCTCCGCAGTTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846930 12 + 123690457 TCGCCGCAGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447088 12 + 204787373 TCTCCACAGTTG i rheMac8.chr2 I 2 C 0 s macFas5.chr2 54916 12 + 192460366 TCTCCACAGTTG i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 530503 12 + 19675229 TCTCCACAGTTG i macNem1.NW_012014355v1 I 2 I 455 s cerAty1.NW_012004056v1 466822 12 + 16847902 TCTCCACAGTTG i cerAty1.NW_012004056v1 I 425 C 0 s chlSab2.chr15 402412 12 - 91754291 TCTCCACAGTTG i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 559777 12 - 1977891 TCTCCACAGTTG i manLeu1.NW_012102020v1 I 2 C 0 s colAng1.NW_012118932v1 439150 12 + 7796314 TCTCCACAGTTG i colAng1.NW_012118932v1 I 1504 C 0 s calJac3.chr17 919401 12 - 74750902 TCCCCACAGTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447883 12 + 17725628 TCTCCACGGTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410974 12 - 6778120 TCTCCACGGTTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 407007 9 - 608964 ---TCACCTTTG i otoGar3.GL873829 C 0 I 3 s dasNov3.JH569502 3885495 12 + 6579706 TCCCCACATTTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=31024.000000 s hg38.chr3_KI270779v1_alt 110346 3 + 205312 ATG s panTro5.chr3 200093980 3 + 202621043 ATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73573 3 + 190779 ATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38471 3 + 106623 ATG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846942 3 + 123690457 ATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447100 3 + 204787373 ATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54928 3 + 192460366 ATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 530970 3 + 19675229 ATG i macNem1.NW_012014355v1 I 455 C 0 s cerAty1.NW_012004056v1 466834 3 + 16847902 ATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402424 3 - 91754291 ATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 559789 3 - 1977891 ATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439162 3 + 7796314 ATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919413 3 - 74750902 ATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447895 3 + 17725628 ATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 410986 3 - 6778120 ATG i cebCap1.NW_016107444v1 C 0 I 50 s otoGar3.GL873829 407019 3 - 608964 ACA i otoGar3.GL873829 I 3 C 0 s dasNov3.JH569502 3885507 3 + 6579706 CTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=36069.000000 s hg38.chr3_KI270779v1_alt 110349 4 + 205312 ACAC s panTro5.chr3 200093983 4 + 202621043 ACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73576 4 + 190779 ACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38474 4 + 106623 ACAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846945 4 + 123690457 ACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447103 4 + 204787373 ACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54931 4 + 192460366 ACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 530973 4 + 19675229 ACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466837 4 + 16847902 ACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402427 4 - 91754291 ACAC i chlSab2.chr15 C 0 I 524 s manLeu1.NW_012102020v1 559792 4 - 1977891 ACAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439165 4 + 7796314 ACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919416 4 - 74750902 GCGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447898 4 + 17725628 GCAC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 407022 4 - 608964 GCAC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3885510 4 + 6579706 AAAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 410989 50 - 6778120 I a score=17618.000000 s hg38.chr3_KI270779v1_alt 110353 4 + 205312 AGGG s panTro5.chr3 200093987 4 + 202621043 AGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73580 4 + 190779 AGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38478 4 + 106623 AGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846949 4 + 123690457 ACGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447107 4 + 204787373 GCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 54935 4 + 192460366 GCGG i macFas5.chr2 C 0 I 628 s macNem1.NW_012014355v1 530977 4 + 19675229 GCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466841 4 + 16847902 GCGG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 559796 4 - 1977891 GCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439169 4 + 7796314 GTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919420 4 - 74750902 ACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447902 4 + 17725628 ACAG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 407026 4 - 608964 ACAG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3885514 4 + 6579706 ACAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 410989 50 - 6778120 I e chlSab2.chr15 402431 524 - 91754291 I a score=86161.000000 s hg38.chr3_KI270779v1_alt 110357 18 + 205312 CACCCACAGCGCTCACGT s panTro5.chr3 200093991 18 + 202621043 CACCCACAGCGCTCACAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73584 18 + 190779 CACCCACAGCGCTCACAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38482 18 + 106623 CACCCACAGCGCTCACAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846953 18 + 123690457 CGCCCACAGCGCTCACAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447111 18 + 204787373 CCCCCACAGCGCTCCCAT i rheMac8.chr2 C 0 I 628 s macFas5.chr2 55567 18 + 192460366 CGCCCACAGCGCTCCCAC i macFas5.chr2 I 628 C 0 s macNem1.NW_012014355v1 530981 18 + 19675229 CCCCCACAGCGCTCCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466845 18 + 16847902 CCCCCACAGCGCTCCCAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 559800 18 - 1977891 CCCCCACAGCGCTCCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439173 18 + 7796314 CGCCCACAGCGCTCCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919424 18 - 74750902 TGCCTACAGCAGTCGTAT i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 447906 18 + 17725628 TGCCTACAGCAGTCACAC i saiBol1.JH378146 C 0 I 5 s otoGar3.GL873829 407030 16 - 608964 GATCCATAGCAATCAT-- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3885518 16 + 6579706 TATTTATGAAAATCAT-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 410989 50 - 6778120 I e chlSab2.chr15 402431 524 - 91754291 I a score=22650.000000 s hg38.chr3_KI270779v1_alt 110375 14 + 205312 GCCTTCCATGGT----GG-- s panTro5.chr3 200094009 14 + 202621043 GCCTTCCATGGT----GG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73602 14 + 190779 GCCTTCCATGGT----GG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38500 14 + 106623 GCCTTCCATGGT----GG-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846971 14 + 123690457 GCCTTCCATGGT----GG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447757 12 + 204787373 GTCTTCCATGGC-------- i rheMac8.chr2 I 628 C 0 s macFas5.chr2 55585 12 + 192460366 GTCTTCCATGGC-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 530999 12 + 19675229 GTCTTCCATGGC-------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466863 12 + 16847902 GTCTTCCATGGC-------- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 559818 14 - 1977891 GTCTTCCATGGCGG------ i manLeu1.NW_012102020v1 C 0 I 554 s colAng1.NW_012118932v1 439191 14 + 7796314 GTCTTCCATGGT--GG---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919447 9 - 74750902 ACTGCGCAT----------- i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 447929 9 + 17725628 ACCGTGCAT----------- i saiBol1.JH378146 I 5 C 0 s otoGar3.GL873829 407046 12 - 608964 GTCTTTCACGAC-------- i otoGar3.GL873829 C 0 I 2 s dasNov3.JH569502 3885534 14 + 6579706 GTCTTCCACAGC------AT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 410989 50 - 6778120 I e chlSab2.chr15 402431 524 - 91754291 I a score=244214.000000 s hg38.chr3_KI270779v1_alt 110389 34 + 205312 GGGTGAATCCTTTGCCAATAGTGCCTGGTGGGTT s panTro5.chr3 200094023 34 + 202621043 GGGTGAATCCTTTACCAGTAGTGCCTGGTGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73616 34 + 190779 GGGTGAATCCTTTACCAATAGTGCCTGGTGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38514 34 + 106623 GGGTGAATCCTTTGCCAATAGTGCCTGGTGGGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120846985 34 + 123690457 CGGTGAATCCTTTGCCAATAGTGCCTGGTGGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447769 34 + 204787373 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 55597 34 + 192460366 GGGTGAATCCTTTGCCAATAGTCCCTGGTGTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 531011 34 + 19675229 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466875 34 + 16847902 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402955 34 - 91754291 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTT i chlSab2.chr15 I 524 C 0 s manLeu1.NW_012102020v1 560386 34 - 1977891 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTT i manLeu1.NW_012102020v1 I 554 C 0 s colAng1.NW_012118932v1 439205 32 + 7796314 --GTGAATCCTTTGCCAACAGTCCCTGGTGGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919456 19 - 74750902 GGGTGAGTCC--------------TTGG-GGGTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447938 33 + 17725628 GGGTGAGTCCTTTGCCAACGGTCTTTGG-GGATA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 407060 34 - 608964 GGGTCCATCCCTTGCCAAGAGTCTACAATGGGTT i otoGar3.GL873829 I 2 C 0 s dasNov3.JH569502 3885548 34 + 6579706 GGGTTAATTTCTCGCCAAGGGCTTAGGATGAGAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 410989 50 - 6778120 I a score=843592.000000 s hg38.chr3_KI270779v1_alt 110423 110 + 205312 TCAGGTAAGTTGTAACTTTTGGACCTTCTGCTGTCTCTGACTTTGAGTCACATGACAAGGTCCTCAT----------GGAATTGGGAT--------TCTGGC-----AGCCAG--GTGAGGGCGGTCT------CACCAGC s panTro5.chr3 200094057 110 + 202621043 TCAGGTGAGTTGTAACTTTTGGACCGTCTGCTGTCTCTGACTTTGAGTCACATGACAAGGTCCTCAT----------GGAACTGGGAT--------TCTGGC-----AGCCAG--GTGAGGGCGGTCT------CACCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73650 110 + 190779 TCAGGTGAGTTGTAACTTTTGGACCGTCCGCTGTCTCTGACTTTGAGTCACATGACAAGGTCCTCAT----------GGAACTGGGAT--------TCTGGC-----AGCCAG--GTGAGGGCGGTCT------TACCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38548 110 + 106623 TCAGGTAAGTTGTAACTTTTGGACCTTCTGCTGTCTCTGACTTTGAGTCACATGACAAGGTCCTCAT----------GGAATTGGGAT--------TCTGGC-----AGCCAG--GTGAGGGCGGTCT------CACCAGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120847019 108 + 123690457 TCAGGTAAGTTGTAACTTTTGTACCTTCTGCTGTCTCTGAC--TGAGTCACATGACAAAGTCCTCAT----------GGAATTGGGAT--------CCTGGC-----GGCCAG--GTGAGGGCGGTCG------CACCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447803 110 + 204787373 TCGGGTGAGTCGTAGCTTTTGGGCCTCCTGCTGGCTCCGACTCTGAGTCACATGACGAAGTCCTCAC----------GGAAGTGGGAT--------TCTGGC-----GGCCAG--GTGAGGGCTGTCT------CATCAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 55631 110 + 192460366 TCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGGCTCCGACTCTGAGTCACATGACGAAGTCCTCAC----------GGAAGTGGGAT--------TCTGGC-----GGCCAG--GTGAGGGCTGTCT------CATCAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 531045 110 + 19675229 TCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGGCTCCGACTCTGAGTCACATGACGAAGTCCTCAC----------GGAATTGGGAT--------TCTGGC-----GGCCAG--ATGAGGGCTGTCT------CATCAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 466909 110 + 16847902 TCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGGCTCCGACTCTGAGTCACATGAGGAAGTCCTCAG----------GGAATTGGGAT--------TCTGGC-----GGCCAG--GGGAGGGCTGTCT------CATCAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 402989 92 - 91754291 TCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGTCTCCGACTCTGAGTCACATGACGAAGTCCTCAC----------GGAATTGGGAT--------TCTGGC-----GGCCAG--------------------------GT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 560420 110 - 1977891 TCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGTCTCCGACTCTGAGTCACATGAGGAAGTCCTCAG----------GGAATTGGGAT--------TCTGGC-----GGCCAG--GTGAGGGCTGTCT------CATCAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439237 110 + 7796314 TCGCCTGAGTTGTAGCTTTTGGGCCTTCTACTGTCTCCGACTTTGAGCCACATGACGAAGTCCTCAT----------GGAACTGGGAT--------TCTGGC-----GGCCAG--GTGAGGGCTGTCT------CATCAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919475 110 - 74750902 TCGGATGAATTGTCACGTTTGGACCTTCTGCTGTCTCTGACCTTGAGTCACACGTCAAAGCCCTCAT----------GGACTTGGGAT--------TCTGCT-----GGCCAG--GTGAGGGCAGTCT------CACCAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 447971 98 + 17725628 TTGGATGAATTGTAACATTTGGACCTTCTGCTGTCTCTGACCTTGAGTCGCATGACAAAGCCCTCGT----------GGACTTGGGAT--------TCTGGT-----GGCCGG--GTGAGGGC------------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 411039 107 - 6778120 TTGGCTGTGTTGTAACGTTTGGACCTTCTGCTGTCTCCGACCTTGAGTCACATGACGAAGCCCTCAT----------GGACTTGGGAT--------TCTGGT-----GGCCAG--GTGAGGGCAGCCT---------CAGC i cebCap1.NW_016107444v1 I 50 C 0 s otoGar3.GL873829 407094 128 - 608964 GCATATGAGCT----TTTTTGGACC-TATGCCTTCCTTGACCTCAAGTCACATTGCAAAATCCTTGTCACATAGCTGGGTGTTGGGATCGCAATGGTCAGACAAAGGGGTCAG--ACAAAGGCAGTCT------CACCAGC i otoGar3.GL873829 C 0 I 12 s dasNov3.JH569502 3885582 126 + 6579706 TTAAACTAGT-GTACCTTTTGGACCTTATGCTAAA-AGGACCTGGAGTCAGGTTACCAAGTCCTCATCATATAATTTAGCCTTGGGTC--------TGCAAT-----TGTCAGGGGTAAGAGCAGTCCCTCTCCCACCATC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=705469.000000 s hg38.chr3_KI270779v1_alt 110533 91 + 205312 --TCCTTCATGCCTGCAGG---CCTCC----------------CCCTTCCTCACAACTGATGGATGGTTGGCTC-CCTAGCCGCCC--CGTTAGTGCCATGTGTGCTTAATTCTT s panTro5.chr3 200094167 91 + 202621043 --TCCTTCGTGCCTGCAGG---CCTCC----------------CCCTTCCTCACAACTGATGGATGGTTGGCTC-CCTAGCCGCCC--CCTTAGTGCCATGTGTGCTTAATTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73760 91 + 190779 --TCCTTCGTGCCTGCAGG---CCTCC----------------CCCTTCCTCACAACTGATGGATGGTTGGCTC-CCTAGCCGCCC--CCTTAGTGCCATGTGTGCTTAATTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38658 91 + 106623 --TCCTTCGTGCCTGCAGG---CCTCC----------------CCCTTCCTCACAACTGATGGATGGTTGGCTC-CCTAGCCGCCC--CCTTAGTGCCATGTGTGCTTTATTCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120847127 90 + 123690457 --TCCTTCGTGCCTGC-GG---CCTCC----------------CCCTTCCTCACAACTGATGGACGGTGGGCTC-CCTAGCCGCCC--CCTTAGTGCCATATGTGCTTAATTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202447913 91 + 204787373 --TCCTTCGTGCCTGCTGG---CCTCC----------------CCCTTCCTCACAACTGACGGACGGTTGACTC-CCTAGCCACCC--CCTCAGTACAATGTGTGCTTAATTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 55741 91 + 192460366 --TCCTTCGTGCCTGCTGG---CCTCC----------------CCCTTCCTCACAACTGACGGACGGTTGACTC-CCTAGCCACCC--CCTCAGTACAATGTGTGCTTAATTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 531155 91 + 19675229 --TCCTTCGTGCCTGCTGG---CCTCC----------------CCCTTCCTCACAACTGACGGACGGTTGACTC-CCTAGCCACCT--CCTCAGTACAATGTGTGCTTAATTCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 467019 91 + 16847902 --TCCTTCCTGCCTGCTGG---CCTCC----------------CCCTTCCTCGCAACTGACGGACGGTTGACTC-CCTAGCCACCC--CCTCAGTACAATGTGTGCTTAATTCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 403081 91 - 91754291 --TCCTTCGTGCCTGCTGG---CCTCC----------------CCCTTCCTCGCAACTGACGGACAGTTGACTC-CCTAGCCGCCC--CCTCAGTACGATGTGTGCTTAATTCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 560530 91 - 1977891 --TCCTTCGTGCCTGCTGG---CCTCC----------------CCCTTCCTCGCAACTGACGGACGGTTGACTC-CCTAGCCACCC--CCTCAGTACAATGTGTGCTTAATTCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439347 91 + 7796314 --TCCTTTGTGCCTGCTGG---CCTCC----------------CCCTTCCTCGCAACTGACGGACGGTTGACTC-CCTAGCCACCC--CCTTAGTACAATGTGTGCTTAATTCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919585 88 - 74750902 --TCCA-CGTGCCTACGGG---C--CT----------------CTCTTCCTCGCAACTGACGGGTGCTTGGCTC-CCAAGCTGCCC--CCTTAGTGCCATGTGTGCTTTATTCtt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 448069 73 + 17725628 ------------------G---T--CT----------------CCCTTCCTCGAAACGAACGGGTGGTTGGCTC-CCAAGCTGCTC--CCTTAGTGCCGTGTGTGCTTAATCCtt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 411146 91 - 6778120 --TCCATCGTGCCTGCAGG---CCTCT----------------CCCTCCCTCACAACGGGCGGGTGGTTGGCTC-CCAAGCTGCCC--CCTTAGTGCCATGTGTGCTTAATTCTT i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3885708 114 + 6579706 CCCGTTCCACATTTGCACGGTACCTCCCTTTTTGTTCTGTATTCCCTTCCTAGTAACTCTTGGACAATGTTCCCACCTACCTGCCTCACCCCTGTGCCAC-TTTATTCAATTCCT i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=8859625.000000 s hg38.chr3_KI270779v1_alt 110624 1109 + 205312 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttgc---tttttagagcagttttgggtttacagcaaaattttcctgagtggaaaatacagaaagttcccatatgccccctgccacacacacatatacctacgcccagcctcccccaccaccaacgccctgcaccag--gtgg--cacgtgtgacagtcgatgcgtccacgtcaacatatcctca----tcaaagtccagagttgacagcacatttttggcgttggatattctccattctctattcaacaacgtatcggctggcccggcgcagtggctcatgcctgtaatctcagcactttgggaggtggaggcgggtggatctctttgaga-tcaggagttcgagaccagcctggccaacacggcgaaaacccatctctactaaaaatacaaaaattagccgggtgtggtggcgcatgcctgtagtcttagctacatggaag--------------------gctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagcagagatcgcaccactgcactccattctgggcgacagagtgagactcaatctcaa---------------aaaataacataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccccaacccctggcaaccactgatcttttcactgtctccatagttttaccttttccagaatgtcatataattgcaaccgtaaggtaaatagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatggctgtgtaattcatttcattttagcactgaataatattccatcgtctgaatgcaccataggttatttacccgttcacctgctgaaggacatcttggttgcttccaagttttggcaattatg--aataaagctgctataaattatgaataaagctgctataaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaatatcaaggagtgtgattgctggactgcatagtaagagtatggtttag-tttggtaagaaagtgcc s panTro5.chr3 200094258 1113 + 202621043 TTAAAAATTTAAATATATTAATTTTAAAAATCATCttttaaataataaaatttgc---tttttagagcagttttgcgtttacagcaaaattgtcctgagtggaaaatacagaaagttcccatatgccccctgccacacacacatatacctacgcccagcctcccccaccaccagcgccctgcaccag--gtgg--cacgtgtgacagtcgaggcgtccacgtcaacatatcctca----tcaaagtccagagttgacagcacatttctggcgttggatattctccattctctattcaacaatgtatcggctggccaggcacagtggctcatgcctgtaatctcagcactttgggaggtggaggcgggtggatctc-ttgaga-tcaggagttctagaccagcctggccaacac-gcgaaaacccatctctactaaaaatacaaaaattagccgggtgtggtggcgcatgcctgtagtcttagctacttggaag--------------------gctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccattctgggtgacagagtgagactcaatctcaaaaaat----------aaaataacataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccccaacccctggcaaccactgatcttttcactgtctccgtagttttaccttttccagaatgtcatataattgcaaccgtaagctaaatagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatggctgtgtagttcatttcattttagcactgaataatattccattgtctgaatgcaccataggttatttacccgttcacctgctgaaggacatcttggttgcttccaagttttggcaattatg--aatgaagctgctataaattatgaataaagctgctacaaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaatatcaaggagtgtgattgctggactgcatagtaagagtatggtttag-tttggtaagaaagtgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 73851 1112 + 190779 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttgc---tttttagagcagttttgcgtttacagcaaaattgtcctgagtggaaaatacagaaagttcccatatgccccctgccacacacacatatacctacgcccagcctcccccaccaccagcgccctgcaccag--gtgg--cacgtgtgacagtcgaggcgtccacgtcaacatatcctca----tcaaagtccagagttgacagcacatttctggcgttggatattctccattctctattcaacaatgtatcggctggccaggcacagtggctcattcctgtaatctcagcactttgggaggtggaggcgggtggatctc-ttgaga-tcaggagttctagaccagcctggccaacac-gcaaaaacccatctctactaaaaatacaaaaattagccgggtgtggtggcgcatgcctgtagtcttagctacttggaag--------------------gctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccattctgggtgacagagtgagactcaatctcaaaaaat----------aaaataacataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccccaacccctggcaaccactgatcttttcactgtctccgtagttttaccttttccagaatgtcatataattgcaaccgtaagctaaatagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatggctgtgtagttcatttcattttagcactgaataatattccattgtctgaatgcaccataggttatttacccgttcacctgctgaaggacatcttggttgcttccaagttttggcaattatg--aatgaagctgctataaattatgaataaagctgctacaaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaatatcaaggagtgtgattgctggactgcatagtaagagtatggtttag-tttggtaagaaagtgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 38749 1112 + 106623 TTAAAAATTTAAATATATTAATTTT-GAAATCATCttttaaataataaaatttgc---tttttagagcagttttgggtttacagcaaaattttcctgagtggaaaatacagaaagttcccatatgccccctgccacacgcacatatacctacacccagcctcccccaccaccaacgccctgcaccag--gtgg--cacgtgtgacagtcaatgcgtccacgtcaacatatcctca----tcaaagtccagagttgacagcacatttttggcgttggatattctccattctctatccaacaatgtatcggctggccaggcgcagtggctcatgcctgtaatctcagcactttgggaggtggaggcgggtggatctc-ttgaga-tcaggagttcgagaccagcctggccaacacggcgaaaacccatctctactaaaaatacaaaaattagccgggcgtggtggcgcatgcctgtagtcttagctacttggaag--------------------gctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcgcaccactgcactccattctgggcgacagagtgagactcaatctcaaaaaat----------aaaataacagaaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccccaacccgtggcaaccactgatcttttcactgtctccatagttttaccttttccagaacgtcatataattgcaatcataaggtaaatagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatggctgtgtagttcattgcattttagcactgaataatattccatcgtctgaatgcaccataggttatttacccattcacctgctgaaggacatcttggttgcttccaag-tttggcaattatg--aataaagctgctataaattatgaaaaaagctgctataaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaatatcaaggagtgtgattgctggactgcatagtaagagtgtggtttag-tttggtaagaaagtgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120847217 1114 + 123690457 TTCAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---gtcttagagcagttttgggtttacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctgccacacacgcatatacctacgcccagcctcccccaccacgaacgccctgcaccag--gtggcacacgtgtgacagtcgatgcgtccacgtcaacatatcctca----tcaaagtccagagtcgacagcgcatttttggcactggatattctccattctctattcaacaatgtatcggctggccgggtgcagtggctcatgcctgtaatcccagcactttgggaggtcgaggcgggtggatctc-ttgaga-tcaggagttctagaccagcctggccaacatggcgaaaacccatctctactaaaaatacaaaaattagccgggcatgatggcgcacacgtgtagtctcagctacgtggaag--------------------gctgaggcaggacagtcgcttgaacccaggaggcggaggttgcagtgagtcaagattgcaccactgcactccatcctgggcgacagagtgagactc-gtctcaaaaaat----------aaaataacataaatgtttctgccattgtagcatcatacagaaaaattagtagcttcagtgccctaaaaatcctctg-------tgcttcacttattcatccccaacccctggcaaccactgatcttttcactgtctccatagttttaccttttccagaatgtcatataattgcagtcataaggtaaatagccttttcagattgtcttctttcacacagt-atatgcattgaagttttctgtatgtattttcatggctgtgtagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccgttcacctgctgaaggacatcttggttgcttccaagttttggcaattatg--aataaagctgctataaattatgaataaagctgctataaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttag-tttggtaagaaactgcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202448004 1131 + 204787373 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---tttttaaagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctgccacacacacatatccatacgcccagcttcccccaccatcaacaccctgca-cgg--ggggcacatgtgtgacagtccatgcgtccacgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcggctggtcgggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcataccactgcactccatcctgggcgatagagcaagactgcatctcaaaaaat----------aaaataaaataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccgtttccagaataccatataattgcaatcatgaggtaagtagccttttcagattctcctctttcacatagt-atatgcatttaagttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccattcacctgctgaagggcatcttgattgcttccaagttttggcaattatg--aataaagctgctataaattatgaataaagctgctataaatctccatgtgcaggttttcgtgtggacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttgg-tttggtaagaaactgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 55832 1131 + 192460366 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---tttttaaagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctgccacacacacatatccatacgcccagcttcccccaccatcaacaccctgca-cgg--ggggcacatgtgtgacagtccatgcgtccacgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcggctgttcgggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcataccactgcactccatcctgggcgatagagcgagactgcatctcaaaaaat----------aaaataaaataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccgtttccagaataccatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccattcacctgctgaagggcatcttgattgcttccaagttttggcaattatg--aataaagctgctataaattatgaataaagctgctataaatctccatgtgcaggttttcgtgtggacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttgg-tttggtaagaaactgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 531246 1131 + 19675229 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---tttttaaagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatatactccctgccacacacacatatccatacgcccagcttcccccaccatcaacaccctgca-cgg--ggggcacatgtgtgacagtccatgcgtccacgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcggctggttgggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcataccactgcactccatcctgggtgatagagcgagactgcatctcaaaaaat----------aaaataaaataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccttttccagaataccatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctatatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccattcacctgctgaagggcatcttgattgcttccaagttttggcaattatg--aataaagctgctataaattatgaataaagctgctataaatctccatgtgcaggttttcgtgtggacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttgg-tttggtaagaaactgcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 467110 1133 + 16847902 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---tttttagagcagttttaggttcacagcaaaattttcctaagtggaaaatacagaaagttcccatatacgccctgccacacacacatatccatacgcccagcttcccccaccatcaacaccctgca-agg--ggggcacatgtgtgacagtcgatgcgtccacatcagcatatcctta----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcggctggtcaggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccatcctaggcgatagagcgaaactccatctcaaaaaat----------aaaataaaataaatgtttctgccattgcagcatcatacagaaaaataaatagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccttttccagaatatcatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcatctgaatgtaccatggattatttacccattcacctgctgaaggacatcttgattgcttccaagttttggcaattatgaaaataaagctgctataaattatgaataaagctgctataaatctccatgtgcaggttttcatgtgaacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttgg-tttggtaagaaactgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 403172 1131 - 91754291 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---tttttagagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctg-cacacacgcatatccatatgcccagcctcccccaccatcaacaccctgca-cgg--ggggcacgtgtgtgacagtccatgagtctgtgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgctggacatt---cattctctattcaacaatgtatcggctggtcaggcgcggtggttcatgcttgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttggggatcaggagttcaagaccagcctggtcaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtatcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccatcctcggcgatagagtgagactccatctcaaaaaat----------aaaattaaaaaaatgtttctgccattgtagaatcatacagaaacataagtagtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccttttccagaatatcatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccactcacctgctgaagggcatcttgattgcttccaagttttggcaattatg--aataaagctgctataaattgtgaataaagctgctataaatctccgtgtgcaggttttcatgtggacaaaaacattttccatccctttgggtaaataccaaggagtatgattgctggactgcatagtaagagtatgctttgg-tttggtaagaaactgcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 560621 1129 - 1977891 TTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac---tttttagagcagttttaggttcacagcaaaattttcctaagtggaaaatacagaaagttcccatatacgccctgccacacacacatatccatacgcccagcttccccgaccatcaacaccctgca-ggg--ggggcacatgtgtgacagtcgatgcgtccacatcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtattggctggtcaggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccatcctaggcgatagagcgagactccatctcaaaaaat----------aaaataaaataaatgtttctgccattgcagcatcatacagaaaaataa--agtttcagtgccctaaaaatcctctg-------tgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccttttccagaatatcatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaagttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcatctgaatgtaccatagattatttacccattcacctgctgaaggacatcttgattgcttccaagttttggcaattatg--aataaagctgctataaattatgaataaagctactataaatctccatgtgcaggttttcatgtggacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttgg-tttggtaagaaactgcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 439438 1106 + 7796314 TTAAAAATTTAAATATATTAGTTTT-AAAATCATCttttaaataataaaaattac---tttttagagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatatacaccctgccacacacgcatatccatacgcccagcctcccccaccatcaacaccctgca-cag--ggggcacatgtgtgacagtcgatgcatccacgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcagctggtcaggcgcggtggttcatgcctgtaatcccagcactttgggaggctgaggcaggtggatctc-ttgagg-tcaggagttcaagaccagcctggccaatatggcgaaaccccatatctactaaaaatacaaaaattagccaggtgtgatgacgcacacttttagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactatactccatcctgggcgatagagtgagactctgtctcaaaaaat----------aaaataaaataagtgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaattcctctg-------tgcttcactta-tcatccctaatgcctggcaaccactgatctttttactgtctccataattttaccttttccagaatatcatataattacaatcgtgaggtaagtagccttttcagattgtcttattt--catagt-atatgcgtttaagttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaaataatttccatcatctgaatgtaccatagattatttacccgttcacctgctgaaggacatcttgattgtttccaagttttggcaattatg------------------------agtaaagctgctataaatctccgtgtgcagattttcatgtggacaaaaacattttctgtccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggtttag-tttggtaagaaactgcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 919673 1088 - 74750902 ttaaaaatttaagtatattaattta-aaaatCATCttttaaacaataaaatttac-tttttttagagcagttttaggttcacagcaaaattttccagagtgggagatacagaaagttcccatataccccctgccacacac-catctgcgcacgcacagcctcccccaccatcaacatcctgcgccagagggggtacatttgtgacagccgatgcatccacagcaacctatcctcatcactcaaggtccagcgtctacagttcacttttggcgtcgga-------cattctccattcaacagtgtatctgctggccgggcgcggtggctcatgcctgtaatcccagcaatttgggaggttgaggtaggcagatctc-ttgagg-tcaggagttcaagaa-aacctgggcaacatggtaaaaccctgactctactaaaaatacaaaaattggctgagcatggtgtcgcgcgcctataatcccagctacttgggag--------------------gctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgaaccaaggtcatgccgctgcactccagcctgggtgacagagcgaggctccgtctcaaaaaataaaacaaaacaaaataaaata--tgtttctgccattgtagcatcatatagaaaaacaagtattttcagtgccctaaacctcctctg-------tgctccacctgttcagccctaagccctggcaaccacggatctttttactgtctccataattttgccctttccagaacgtcatgtgatgggaatcataaggtaagtagccttttcagattgccttctttcacatggcaacatgcattgcagttttctgtatggctttttgtggctgtatagtt--tgtcattttagcgctgaacactattccgtcgtctgagtgttccgtacg------------tcccctgctgaaggacatcgtggttgcttccaagttttggcaattatg------------------------aataaggctgctataaacatccacgtacaggtttttgtgtggacaaaaaagttttccgtccctttgggtaaatacccccgagtgtgattgctagactgggtagtaagagaatggtttcatttttgtaagaaactgcc i calJac3.chr17 C 0 I 3482 s saiBol1.JH378146 448142 1074 + 17725628 taaaaaatttaaatatgttaattta-aaaatCATCTTTCAAATaataaagtttac--ttttttagagcagttttaggttcacagcaaaattttcctgagtgggaaatacagaaatttcccgtgta-cccctgccacacat-catctacaaacgcacagcctcccccgccatcagcatcccg-gccaga-gcggtacgtttgtgacggccgacgcgtccacagcagcacatcctcatcactcaaagtccagagtctacaattcacttttggtgtcgga-------cattctccactcagcagtgtatctgctggccgggcgcagtggctcatgcctgtaatcccagcactttgggaggttgaggtaggcagatgtc-ttgagg-tcaggagttcaagaacagcctgggcaacatggtgaaactcta-------taaaaatacaaaatttagctgagcatggtgttgtgtgcctgtaatcccagctacttgggag--------------------gctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccaaggtcacgccactgcactccagcctgggcgacagagcaaggctgcatctcaaaaaat----------aaaataaaata--tgtttctgccgttgtagtgtcatacagaataacaagtattttcagggccctaaaactcctctgttcagcctgctccacctgctcagccc-aacccctggcaaccacggatcttgttactgtctccataattttgccctttccagaatgtcatataatgggaatcataaggtaagtagccttttcagattgccttctttcacatagtaacatgcatttaagttttctgtatgga-tttcatggctgtatagttcatttcactttagcactgaataatatcacattgtctgaatgttctgtaga------------cctgctgctaaaggacatcttgattgcttccaagttttggcaattatg------------------------aataaagctgctaccaacatccatgtacaggtttttgtgtggacaaaaaagttttccgtcccttttgttaaataccatggagtgtgattgctagactgtatagtaagagtgtggtttaa-ttttgtaagaaactgcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 411237 1072 - 6778120 TAAAAAATTTAAATATATTCATTTA-AAAATCATCttttaaataatcaaatttacttttttttagagcagttttaggttcacagcaaaattttcctgagtgggaaatacag-aagctcccgtataccccctgccacacac-catctacaaacgcacagcct-ccccgccatcagcatcctgcaccgga-gaggtgcatttgtgatggtcgatgcatccacagcaacatatcctcatcactcacagtccagggtttacagttcacttttggcgtcgga-------cattctccattcagcagtgtatctgctggccgggcgcagtggctcatgcctgtaatcccagcacttc----------ggtaggcagatctc-ttgagg-tcaggagttcaagaacagcctgggaaacatggtgaaaccctgactcta-taaaaatacaaaaattagctgagcatggtgttgtgtgcctgtaattccagctacttgggag--------------------gctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgaaccaaggtcatgccactgcactccagcctgggcaacacagcaaggctccatctcaaaaaataaaataaaataaaataaaata--tgtttctgccgttgtagtatcatacagaaaaacaagtattttcagtgccctaaaactcctctg-------tgctccacctgttcagccctaacccctggcaaccatgaatctttttactgtgttcataattttgccctttccagaatgtcatatagtgggaatcatgaggtaagtagccttttcagattgctttctttcacatagtaatatgcatttaggttatctgtatgga-ttccatggctgtatagttcatctcattttagcactgaataacattccatcgtctgaatgttccgtagg------------tcccctgctgaaggacatcttgattgcttccaagttttggcaattatg------------------------aataaagctgctataaacatccatgtacaggtttttgtgtggacaaaaaagttttccgtccctttgggtaaataccacggagtgtgact----gattgtatagtaagagtatggtttaa-ttttgtaagaagctgcc i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I a score=47840.000000 s hg38.chr3_KI270779v1_alt 111733 6 + 205312 aaattg s panTro5.chr3 200095371 6 + 202621043 aaattg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 74963 6 + 190779 aaattg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39861 6 + 106623 aaattg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120848331 6 + 123690457 aaattg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202449135 6 + 204787373 aaattg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 56963 6 + 192460366 aaattg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 532377 6 + 19675229 aaattg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 468243 6 + 16847902 aaattg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 404303 6 - 91754291 aaattg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 561750 6 - 1977891 aaattg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 440544 6 + 7796314 aaattg i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 449216 6 + 17725628 aacttg i saiBol1.JH378146 C 0 I 3058 s cebCap1.NW_016107444v1 412309 6 - 6778120 aaattg i cebCap1.NW_016107444v1 C 0 I 3308 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e calJac3.chr17 920761 3482 - 74750902 I a score=3301771.000000 s hg38.chr3_KI270779v1_alt 111739 660 + 205312 cgggcgcctgtggtcccagctgctgaggaggctgaggcaggagaatcgcgtgaacccgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcc--agactccatctccaaaaaaaaaaaaaaaaaagaaactgccaaattgtcttccaaagtggttgtaccatgttgccttcccaccagcaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttgatcattctt------------tttttctttttcttttgagacggggtctcactccattgctcaggctggagtgaaggctggatcgcggctcactgcagcctcaacctcctgggctcaagcaatcctgccatctcagcctccagagtagctgggaccacagtcacatgctaccgtgcccatataattttttaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatcctcctgcttcagcctcccaaagtgctgggagtacaggtgtgagccacagtgcctggtgactgtggtcattctaacaggtgtgtattgAGTA----------------------------------------------------------CAGTTGTGAGCCACGATGCCTGGCgattgtggtcattctaacgggtgtg s panTro5.chr3 200095377 653 + 202621043 cgggtgcctgtggtcccagctactgaggaggctgaggcaggagaatcgcgtgaacctgggaggtggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcc--agactccatctcc----aaaaaaaaaaaaaagaaactgccaaattgtcttccaaagtggttgtaccatgttgccttcccactggcaat---ggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttgatcattctt------------tttttctttttcttttgagacagggtctcactccgttgctcaggctggagtgaaggctggatcacggctcactgcagcctcaacctcctgggctcaagcaatcctgccatctcagcctccagagtagctgggaccacagtcacatgctaccgtgcccatataattttttaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatcctcccgcttcagcctcccaaagtgctgggagtacaggtgtgagccacagtgcctggcgactgtggtcattctaacaggtgtgtattgagta----------------------------------------------------------cagttgtgagccacgatgcctggcgattgtggtcattctaacgggtgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 74969 648 + 190779 cgggtgcctgtggtcccagctactgaggaggctgaggcaggagaatcgcgtgaacctgggaggtggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcc--agactccatctcc-------aaaaaaaaaaaagaactgccaaattgtcttccaaagtggttgtaccatgttgccttcccactggcaat---ggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttgatcattctt------------tttt--cttttcttttgagacagggtctcactccgttgctcaggctggagtgaaggctggatcacggctcactgcagcctcaacctcctgggctcaagcaatcctgccatctcagcctccagagtagctgggaccacagtcacatgctaccgtgcccatataattttttaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatcctcccgcttcagcctcccaaagtgctgggagtacaggtgtgagccacagtgcctggcgactgtggtcattctaacaggtgtgtattgagta----------------------------------------------------------cagttgtgagccacgaagcctggcgattgtggtcattctaacgggtgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 39867 712 + 106623 cgggcgcctgtggtcccagctactgaggaggctgaggcaggagaatcgcgtgaacccgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagcc--agactccatctcc------aaaaaaaaaaaagaaactgccaaattgtcttccaaagtggttgtaccatgttgccttcccaccggcaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttgatcattctc------------tttttctttttcttttgagacggggtctcactccgttgctcaggctggagtgaaggctggatcacggctcactgcagcctcaacctcctgggctcaagcagtcctgccatctcagcctccagattagctgggaccacagtcacatgctaccgtgcccatataattttttaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatcctcccgcttcagcctcccaaagtgctgggagtacaggtgtgagccacagtgcctgacgactgtggtcattctaacaggtgtgtattgAGTACGGGTGTAAGCCACGGTGCCTGGCGATTGTGGTCATTCTAACAGGTGTGTATTGAGTCCAGGTGTAAGCCAcggtgcctggcgattgtggtcattctaacgggtgtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120848337 660 + 123690457 cgggcacctgtggtcccagctactcaggaggctgaggcaggagaatcgtgtgaacttgagaggcggagcttgcagtgagccaagattgtgccactacactccagcctgggcgacaaaagcggagactccatctcc--aaaaaaaagaaaaaaacaaactgccaaattgtcttccagagtggttgtaccatgctgccttcccaccagcaatgaaggagggttcctgtttgctccacatcccggacagcgtttgaagttttcagtgctgtggatttggatcattctt------------tttttctttttcttttgagacagggtctcactctgttgctcaggctggagtgcaggctggatcatggttcactgcagcctcaacc-cctgggctcaagccatcctctcacctcagcctccagagtagctgggaccacagtcacgtgccaccgtgcccatacaatttttaaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatccgcctgcttcagcctcccaaagtgctgggagcacaggtgtgagccacagtgcctggcgattgtggtcattgtaacgggtgtgtattgagca----------------------------------------------------------cagctgtgagctacggtgcctggcgattgtggtcattgtaacaggtgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202449141 609 + 204787373 cgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagggtg--aaactccgtctca---agaaaaataaaaaaataaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagagttcttg-ttgctccacatcctgaacagcatttgaagttttcaatgctgtggattttggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccagagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggtgtgtatt---------------------------------------------------------------------------------------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 56969 609 + 192460366 cgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagggtg--aaactccgtctca---agaaaaataaaaaaataaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcttg-ttgctccacatcctgaacagcatttgaagttttcaatgctgtggattttggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccagagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggtgtgtatt---------------------------------------------------------------------------------------------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 532383 609 + 19675229 cgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagggtg--aaactccgtctca---agaaaaataaaaaaataaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcttg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccagagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggggtgtatt---------------------------------------------------------------------------------------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 468249 609 + 16847902 cgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggccgagcttgcagtgagccgagatcacgccactgcactccagcctgggggacagagtg--aaactccgtctca---agaaaaataaaaaaataaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccggagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggtgtgtatt---------------------------------------------------------------------------------------------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 404309 615 - 91754291 tgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggagccagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagtg--aaactccgtctca---agaaaaataaaaaaataaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttggtcaTTCTTtttttctttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtataggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccggagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgcggtcattctaacaggtgtgtatt---------------------------------------------------------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 561756 615 - 1977891 cgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggggacagagtg--aaactccgtctca---agaaaaataaaaaaataaactaccgaattgtctttcaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttggtcaTTCTTtttttctttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccggagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctggactcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggtgtgtgtt---------------------------------------------------------------------------------------------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 440550 651 + 7796314 cgggcacctgtagtcccagctacttgggagactgaggcagaagaattgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagtg--aaactctgtctca---agaaaaataaaaaaagagactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttggtcattctt------tttttctttttctttttcttttgccacagggtctcactgtgtttctc------------agactggatcacgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccagagtagctgggaccacagtcacctgctaccacgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggttcaagtcatcctcctgcttcagtctcccaaagtgctgggagtagaggtgtgagccacaatgcctggcaattgtagtcattctaataggtgtgtactgAGTA----------------------------------------------------------CATGTGTGAGCCACTGTGTCTGGTGATTGTGGTCATTCTAACAGGTGTG i colAng1.NW_012118932v1 C 0 I 3110 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I a score=1433861.000000 s hg38.chr3_KI270779v1_alt 112399 324 + 205312 catgggtttcgcgttgtttgcggttccctaatgacatacgatgttgaacatctttgtagatgcttatgtgccatgtgaatgtcttctttgg---tgatatgtatgttcag-tttttttacccatttaaaaaactgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaattaa---tattttttgagacagagtctcactctgttgcccaggctggagtgcagtggcgcgatctcagttcactgcaatctccgcctcctgggttcaagtgattatcctgcctcagcctcccgagtagctgggattac s panTro5.chr3 200096030 325 + 202621043 cattggtttcgcgttgtttgcggttccctaatgacatacgatgttgaacatctttgtagatgcttatgtgccgtgtgaatatcttctttgg---tgataggtatgttcagttttttttacccatttaaaaaactgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaattaa---tattttttgagacagagtctcactctgttgcccaggctggagtgcagtggcgcgatctcagttcactgcaatctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggggttac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75617 324 + 190779 cattggtttcgcgttgtttgcggttccctaatgacatacgatgttgaacatctttgtagatgcttatgtgccgtgtgaatatcttctttgg---tgataggtatgttcag-tttttttacccatttaaaaaactgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaattaa---tattttttgagacagagtctcactctgttgcccaggctggagtgcagtggcgcgatctcagttcactgcaatctccgcctcctgggttcaagtgattctcctgcctcggcctcccgagtagctggggttac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40579 325 + 106623 tattggtttcgcgttgtttgcggttccctaatgacatacgatgttgaacatctttgtagatgcttttgtgccatgtgaatatcttctttgg---tgatatgtatgttcagttttttttacccatttaaaaaactgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaattaa---tattttttgagacagagtctcactgtgttgcccaggctggagtgcagtggcgcgatctcagttcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggattac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120848997 318 + 123690457 tattggtttcacgttgtttgcagttccctaatgacatacgatgttgaatatctttgtagatgcttatgtgccatgtgaatatcttctttggtgatgatatgtatgttcag-tttt------------aaaaactgggttattcattttcttattgttgagttgtaagagttatttgtatatttcgttaattaattaatgttattttttgagacagactctcactctgttgcccaggctggcatgcagtgatgtgatctcagctcactgcaacctccacctcccggattcaagtgattatcctgcctcagcctcctgagtagctgggattac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202449750 321 + 204787373 ----ggttgtgcgatgtttgcagttccctaaggacat--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcag-tttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcagtggtgcaatctcagttcactgcaatctccgcctcccgggttcaagcgattctcctgcctcggccttccgagtagctgggattac i rheMac8.chr2 C 0 I 7 s macFas5.chr2 57578 321 + 192460366 ----ggttgtgcgatgtttgcagttccctaaggacat--gatgttgaacgtctttttagatgcttatgtgccatatgaataccttctttgg---tgatatgtatgttcag-tttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcagtggtgcaatctcagttcactgcaatctccgcctcccgggttcaagcgattctcctgcctcggccttccgagtagctgggattac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 532992 321 + 19675229 ----ggttgtgcgatgtttgcagttccctaaggacat--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcag-tttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcagtggtgcaatctcagttcactgcaatctccgcctcccgggttcaagcgattctcctgcctcggccttccaagtagctgggattac i macNem1.NW_012014355v1 C 0 I 7 s cerAty1.NW_012004056v1 468858 321 + 16847902 ----agttgtgcgatgtttgcagttccctaatgacat--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcag-tttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcaggggtgcaatctcagttcactgcaatctctgcctcccggattcaagcgattctcctgcctcagccttctgagtagctgggattac i cerAty1.NW_012004056v1 C 0 I 7 s chlSab2.chr15 404924 316 - 91754291 ----ggttgtgcgatgtttgcagttcccta-----at--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcag-gttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcagtggtgcaatctcagttcactgcaatctccgcctcccaggttcaagcgattctcctgcctcggccttctgagtagctgggattac i chlSab2.chr15 C 0 I 7 s manLeu1.NW_012102020v1 562371 321 - 1977891 ----ggttgtgcgatgtttgcagttccctaatgacat--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcag-tttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaactaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcaggggtgcaatctcagttcactgcaatctccgcctcccggattcaagcgattctcctgcctcagccttctgagtagctgggattac i manLeu1.NW_012102020v1 C 0 I 7 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I a score=2701.000000 s hg38.chr3_KI270779v1_alt 112723 25 + 205312 tactactggtagtagtaatggcgcc s panTro5.chr3 200096355 7 + 202621043 ------------------aggtgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75941 7 + 190779 ------------------aggtgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40904 7 + 106623 ------------------aggcgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120849315 7 + 123690457 ------------------aggcgtc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 57899 7 + 192460366 ------------------aggcatg i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 533313 7 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e manLeu1.NW_012102020v1 562692 7 - 1977891 I e chlSab2.chr15 405240 7 - 91754291 I e cerAty1.NW_012004056v1 469179 7 + 16847902 I e rheMac8.chr2 202450071 7 + 204787373 I a score=1165183.000000 s hg38.chr3_KI270779v1_alt 112748 246 + 205312 cgccaccacacccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaacgcctgacctcaattgatccgcttacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacccggctctttgtata-ttttagataaaagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgcctttcacagagaagaagttttt s panTro5.chr3 200096362 246 + 202621043 cgctgccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaacacctgacctcaattgatccacttacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacccggctctttgtata-ttttagataaaagtctgtaatcagatgggacttttgcaaatattttcattctcttgccattgcctttcacagagaagaagttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 75948 246 + 190779 cgctgccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaacacctgacctcaattgatccacttacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacccggctctttgtata-ttttagataaaagtctgtaatcagatgggacttttgcaaatattttcattctcttgccattgcctttcacagagaagaagttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 40911 243 + 106623 cgccaccacacccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggactccaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacccggctctttgtata-ttttagataaaagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgcctttcacag---agaagttttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120849322 246 + 123690457 cgccaccacacccagctaatttttgtatttttagtagagacagggtttcaacatgttggccaggctggtctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgagatttcaggtctgagccagtgcacctggctctttgtata-ttttagataacagtctttaatcagatgagacttttgcaaatattttcattttcttgccattgcctttcacagagaagaagttttt i nomLeu3.chr11 C 0 I 2287 s rheMac8.chr2 202450078 247 + 204787373 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtgtgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i rheMac8.chr2 I 7 C 0 s macFas5.chr2 57906 247 + 192460366 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtgtgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 533320 247 + 19675229 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtgtgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttctgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i macNem1.NW_012014355v1 I 7 C 0 s cerAty1.NW_012004056v1 469186 247 + 16847902 caccaccacacccagctaatttttgtgtttttaatagagacagggtttccccatgttgaccaggctgttctcaaacgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacggagaggtagttttt i cerAty1.NW_012004056v1 I 7 C 0 s chlSab2.chr15 405247 247 - 91754291 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaacgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i chlSab2.chr15 I 7 C 0 s manLeu1.NW_012102020v1 562699 247 - 1977891 caccaccacacccagctaatttttgtgtttttaatagagacagggtttccccatgttgaccaggctgttctcaaacgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggtagttttt i manLeu1.NW_012102020v1 I 7 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I a score=1753355.000000 s hg38.chr3_KI270779v1_alt 112994 485 + 205312 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttgctattgtatctaaaatgtcatcaccatactcaaggtcatttagattttctcctatattatcttctgggagtcttacagttttgcat------tttattgaggtttatgattcattttgagtttttatgaaaggtataaggtctgtgtctagatttttttttttttttttttttttttttttt-tttttttgcttgtggatgtccggttgtcccagcgtcatttattgaaaacactatctctgctccattgtgtggcctctgctgctttgtcaaagatcagttgacacatttatacaggtctattagaaatattacttttaatattctgggctctctattctgttccattgatctatttgtctattcttttgccagtatcatgctgctttcatgactatagctttagagtaagccttgaagtcaggtggtatcagtcctc s panTro5.chr3 200096608 467 + 202621043 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttgctattgtatctaaaacgtcatcaccatactcaaggtcatttagattttctcctatattatcttctgggagtcttacagttttgcat------tttattgaggtttatgattcattttgagtttttatgaaaggtataaggtctgtgtctaga------------------tttttttttttt-tttttttgcttgtggatgtccggttgtcccagcgtcatttattgaaaacactatctctgctccattgtgtggcctctgctgccttgtcaaagatcagttgacacatttatacaggtctattagaaatattacttttaatattctgggctctctattctgttccattgatctatttgtctattcttttgccagtatcatgctgctctcatgactatagctttagagtaagccttgaagtcaggtggtatcagtcctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76194 465 + 190779 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttgctattgtatctaaaacgtcatcaccatactcaaggtcatttagattttctcctatattatcttctgggagtcttacagttttgcat------tttattgaggtttatgattcattttgagtttttatgaaaggtataaggtctgtgtctag--------------------tattttttttt-tttttttgcttgtggatgtccggttgtcccagcgtcatttattgaaaacactatctctgctccattgtgtggcctctgctgccttgtcaaagatcagttgacacatttatacaggtctattagaaatattacttttaatattctgggctctctattctgttccattgatctatttgtctattcttttgccagtatcatgctgctctcatgactatagctttagagtaagccttgaagtcaggtggtatcagtcctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41154 473 + 106623 aatgttaatgaagttcagctgatcaattatttccttcatggatcatgcccttgctattgtatctaaaacgtcatcaccatactcaaggtcatttagattttctcctatgttatcttctgggagtcttacagttttgcat------tttattgaggtttatgattcattttgagtttttatgaaaggtataaggtctgtgtctaga------------tttttttttttttttttt-tttttttgcttgtggatgtccggttgtcccagcgtcatttattgaaaacactatctctgctccattgtgtggcctctgctgctttgtcaaagatcagttgacacatttatacaggtctattagaaatattacttttaatattctgggctctctattctgttccattgatctatttgtctattcttttgccagtatcatgctgctctcatgactatagctttagagtaagccttgaagtcaggtggtatcagtcctc i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202450325 474 + 204787373 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttggtattgtatctaaaaagtcatcaccatccccaaggtcatttagattttctcctatgttatcttgttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctcta---------------tataaatatattta--tttttttgcatgtgaatgtccagttgtcccagtatcgtttgttgtaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatacaggtcgattagaaatattacttttaatattctgggctctctattctgtcccattgatctatttgtctattcttttgccagtatcatgcggttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i rheMac8.chr2 C 0 I 461 s macFas5.chr2 58153 475 + 192460366 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttggtattgtatctaaaaagtcatcaccatccccaaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctata---------------tataaatatatttat-tttttttgcatgtgaatgtccagttgtcccagtatcgtttgttgtaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatacaggtcgattagaaatattacttttaatattctgggctctctattctgtcccattgatctatttgtctattcttttgccagtatcatgcggttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 533567 476 + 19675229 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttggtattgtatctaaaaagtcatcaccatccccaaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctata---------------tataaatatatttatatttttttgcatgtgaatgtccagttgtcccagtatcgtttgttgaaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatacaggtcgattagaaatattacttttaatattctgggctctctattctgtcccattgatctatttgtctattcttttgccagtatcatgcggttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i macNem1.NW_012014355v1 C 0 I 460 s cerAty1.NW_012004056v1 469433 474 + 16847902 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttggtatcgtatctaaaaagtcatcaccatccccaaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttca-tttattgaggtttatgattcattctgagtttttatgaaaggtataaagtctgtgtctata---------------tataaatatatttat-ttattttgcgtgtgaatgtccagttgtcccagtatcgtttgttgaaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatacaggtctattagaaatattacttttaatattctgggctctctattctgttccatcgatctatttgtctattcttttgccagtatcatgcagttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 405494 473 - 91754291 aatgttaatgaagttcagctcatcaattatttcctgcatggatcatgcccttggtatcgtatctaaaaagtcatcaccatctcccaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctata---------------tataaatatatttat-t--ttttgcgtgtgaatgtccagttgtcccagtatcgtttgttgaaaacactatctctgctccatggcatggcctctgctcctttgtcaaagatcagttgacacatgtatacaggccgattagaaatattacttttaatattctgggctctctgttctgttccattgatctatttgtctattcttttgccagtatcatgcagttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 562946 475 - 1977891 aatgttaacgaagttcagctcatcaattatttccttcatggatcatgcccttggtatcgtatctaaaaagtcatcaccatctccaaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtgtaaagtctgtgtctata---------------tataaatatatttat-ttcttttgcgtgtgaatgtccagttgtcccagtgtcgtttgttgaaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatgcaggtctattagaaatattacttttaatattctgggctctctattctgttccatcgatctatttgtctattcttttgccagtatcatgcagttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e nomLeu3.chr11 120849568 2287 + 123690457 I a score=20948.000000 s hg38.chr3_KI270779v1_alt 113479 12 + 205312 tgaccattctcc s panTro5.chr3 200097075 12 + 202621043 tgaacgttctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76659 12 + 190779 tgaacgttctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41627 12 + 106623 tgaccgttatcc i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 58628 12 + 192460366 caactgttcgcc i macFas5.chr2 C 0 I 449 s cerAty1.NW_012004056v1 469907 12 + 16847902 cgactgttctcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 405967 12 - 91754291 cgactgttctcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 563421 12 - 1977891 cgactgttctcc i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 534043 460 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e rheMac8.chr2 202450799 461 + 204787373 I e nomLeu3.chr11 120849568 2287 + 123690457 I a score=1939699.000000 s hg38.chr3_KI270779v1_alt 113491 1103 + 205312 atcaatattgatttggctattttggatcttttgcctctccacataaactttagagccagtttatccatatctacaaataacttcctgggattttgattaagattgtgtcattatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctatcttaataatattgagtcttctggcctgttgtgctggcgcacacctataatcccagcactttgggatgccgaggagggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgccgaaaccctatctctactaaaaatacaaaaaaaaattagccaggcgtggtggtgtgtgcctgtaatcccagctactcatgaggctgaggcaagagaattgcttgaacccgggaggctgaggttgcagtgagctgagatggtgccactgcactccagcctgggtgacagagggagactccatctc------aaaaaaaaaaaaaaaaaagagtcttcctgttcataaacatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttacacctcagtatttcattttgggggatgctaatgtaaatggtcatatgtatttaattttattattcatttttc--tttttttgtttcctgtcttgctcaaatatttttaattctaaattccaattgttctttgctggcacacacgaaagctgttgacgttaggacactaaccttatatcatgaaacttgtctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaac-aaagcagttttgtttcttcctttttattctgtataccttttatttcccttttgtgtctagttgcattggccaagacctccagcaggatgttgagaatcgatggtgagaggggacgttcttgccttgttactaatcttaggggaaagcatctaatttctcaccgttaaggatgatgttagctgtaggtttttgtagatattcttttattta s panTro5.chr3 200097087 1103 + 202621043 atcaatattgatttggctattttggatcttttgcctctccacataaactttagagccagtttatcaatatctacaaataacttcctgggattttgattaagattgtgttatgatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctatcttaataatattgagtcttctggcctggtgtgctggcgcacacctataatcccagcactttgggatgccgaggagggtggatcacctgagatcaggagtttgagatcagcctggccaaaatgccgaaaccctatctctactaaaaatac-aaaaaaaattagccaggcgtggtggtgtgtgcctgtaatcccagctactcatgaggctgaggcaagagaattgcttgaacccgggaggctgaggttgcagtgagctgagatggcgccactgcactccagcctgggtgacagagggagactccgtcgc-------aaaaaaaaaaaaaaaatgagtcttcctgttcataaatatagaatgtcatcccatttatgaggttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttacacctcagtatttcattttgggggatgctaatgtaaatggtcatgtgtatttaattttattattagtttttctttttttttgtttcctgtcttgctcaaatgtttttaattctaaattccaattgttctttgctggcacacacgaaagctgttgacgttaggacactaaccttatatcatgaaacttgtctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaac-aaagcagttttgtttcttcctttttattctgtataccttttatttcccttttgtgtctagttgcattggccaagacctccagcaggatgttgagaatcgatggtgagaggggacattcttgccttgttcctaatcttaggggaaagcatctagtttctcaccgttaaggatgatgttagctgtaggtttttgtagatattcttttattta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 76671 1105 + 190779 atcaatattgatttggctattttggatcttttgcctctccacataaactttagagccagtttatcaatatctacaaataacttcctgggattttgattaagattgtgttattatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctatcttaataatattgagtcttctggcctggtgtgctggtgcacacctataatcccagcactttgggatgccgaggagggtggatcacctgagatcaggagtttgagatcagcctggccaaaatgccgaaaccctatctctactaaaaatac-aaaaaaaattagccaggcgtggtggtgtgtgcctgtaatcccagctactcatgaggctgaggcaagagaattgcttgaacccgggaggctgaggttgcagtgagctgagatggcgccactgcactccagcctgggtgacagagggagactccgtcta----caaaaaaaaaaaaaaaaatagagtcttcctgttcataaatatagaatgtcatcccatttatgaggttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttacacctcagtatttcattttgggggatgctaatgtaaatggtcatgtgtatttaattttattattagtttttc-ttttttttgtttcctgtcttgctcaaatgtttttaattctaaattccaattgttctttgctggcacacacgaaagctgttgacgttaggacactaaccttatatcatgaaacttgtctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaac-aaagcagttttgtttcttcctttttattctgtataccttttatttcccttttgtgtctagttgcattggccaagacctccagcaggatgttgagaatcgatggtgagaggggacattcttgccttgttcctaatcttaggggaaagcatctagtttctcaccgttaaggatgatgttagctgtaggtttttgtagatattcttttattta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 41639 1108 + 106623 atcaatattgatttggctattttggatcttttgcctctccacataaactttagagccagtttatcaatatctacaaataacttcctgggattttgattaagattgtgttattatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctatcttaataatattgagtcttctggcctggtgtgctggcgcacacctataatcccagcactttgggatgccgaggagggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgccaaaaccctatctctactaaaaatac-aaaaaaaattagccaggcatggtggtgtgtgcctgtaatcccagctactcatgaggctgaggcaagagaattgcttgaacccgggaggctgaggttgcagtgagctgagatggcgccactgcactccagcctgggtgacagagggagactccgtctcaaaaaaaaaaaaaaaaaaaaaaatgagtcttcctgtgcataaatatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatacatcttgtacatattttgttacatttacacctcagtatttcattttgggggatgctaatgtaaatggtcatgtgtatttaattttattattagtttttc--tttttttgtttcctgtcttgctcaaatgtttttaattctaaattccaattgttctttgctggcacacacgaaagctgttgccgttaggacattaaccttatatcatgaaacttgtctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaac-aaagcagttttgtttcttcctttttattctgaataccttttatttcccttttgtatctagttgcattggccacgacctccagcaggatgttgagaatcgatggtgagaggggacattcttgccttgttcctaatcttaggggaaagcatctagtttctcaccgttaaggatgatgttagctgtaggtttttgtagatattcttttattta i gorGor5.CYUI01000576v1 C 0 C 0 s cerAty1.NW_012004056v1 469919 1072 + 16847902 atcaatactgagttggctattttggatcttttgcctctccacataaactttagagccagtttatcaatctctacaaataacttcctgggattttgattaagattgtgttactatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctgtcttaataatattgagtcttctggcctggcacggtggctcacacctataatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgttgaaaccctgtctctactaaaaatac--aaaaaaactagctaggcatggtgatgtgtacctgtaatcccagct--------------------------------acctgggaggctgaggttgcagtgagctgagatggcgccactgcactccagcctgggtgacagagggagactccgtctc--aaaaataaaataaaataaatttgaatcttcctgtccataaacatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttatacctcagtatttcattttgggggatgctaacgtaaatggtaatgtgtatttaatttcattattagtttttc-ttttttttgcttcctgtcttgctcaaatgtttttaattctaaattccaattgttctttgctggcacacatgaaagccattgatgctgggacactaaccttatatcatgaaacttggctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaacaaaaacagttttatttcttcctttttattctgtataccttttatttcccttttgtgtcttgttgcattggccaagacctccagtatgatgttgaaaat---tggtgggaggggacatcctggccttcttcctcatcttaggggaaagcatctagtttctcaccgttaaggatgatgttagcagttggtttttgtagatattattttattta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 405979 1072 - 91754291 atcaatactgagttggctattttggatcttttgcctctccacataaactttagagccagtttatcaatctctacaaataacttcctgggattttgattaagattgtgttattatgtacaatctgtagatcaagttggctatcttgatctgttgctatcttgataatattgagaactgctatcttaataatactgagtcttctggcctggcgcagtggctcacacctataatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgttgaaaccctgtctctactaaaaatac--aaaaaaactagctaggcatggtgatgtgtacctgtaatcccagct--------------------------------acctgggaggctgaggttgcagtgagctgagatggcgccattgcactccagcctgggtgacagagggagactccgtctc--aaaaataaaataaaataaatttgaatcttcctgtccataaacatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttatacctcagtatttcattttgggggatgctaatgtaaatggtaatgtgtatttaattttaTTATTAGTTTTTC-TTTTTTTTGCTTCCTATCTTGCTCAAAtgtttttaattctaaattccaattgttctttgctggcacacacgaaagccattgacgctgggacactaaccttacatcatgaaacttggctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaacaaaaacagttttatttcttcctttttattctgtataccttttatttcccttttgtgtcttgttgcattggccaagacctccagtatgatgttgaaaat---tggtaggaggggacatcctggccttcttcctcatcttaggggaaagcatctagtttctcaccattaaggatgatgttagcagttggtttttgtagatattcttttattta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 563433 1072 - 1977891 atcaatactgagttggctattttggatcttttgcctctctacataaactttagagccagtttatcaatctctaaaaataacttcctgggattttgattaagattgtgttattatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctatcttaataatgttgagtcttctgtactggcgcggtggctcacacctataatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgttgaaaccctgtctctactaaaaatac--aaaaaaactagctaggcatggtgatgtgtacctgtaatcccagct--------------------------------acctgggaggctgaggttgcagtgagctgagatggcgccattgcactccagcctgggtgacagagggagactccgtctc--aaaaataaaataaaataaatttgaatcttcctgtccataaacatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttatacctcagtatttcattttgggggatgctaacgtaaatggtaatgtgtatttaattttattattagtttttc-ttttttttgcttcctgtcttgctcaaatgtttttaattctaaattccaattgttctttgctggcacacatgaaagccattgatgctgggacactaaccttatatcatgaaacttggctgaaattgcttctttgttctgggtttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaacaaaaacagttttatttcttcctttttattctgtataccttttatttcccttttgtgtcttgttgcattggccaagacctccagtatgatgttgaaaat---tggtgggaggggacatcctggccttcttcctcatcttaggggaaagcatctagtttctcaccgttaaggatgatgttagcagttggtttttgtagatattattttattta i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 534043 460 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e macFas5.chr2 58640 449 + 192460366 I e rheMac8.chr2 202450799 461 + 204787373 I e nomLeu3.chr11 120849568 2287 + 123690457 I a score=620653.000000 s hg38.chr3_KI270779v1_alt 114594 293 + 205312 tttatttatttatttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaatctccgcctcctgggttcacaccattctcctgcctcagcctcccaagcagctgggactacaggcgcccaccaccacgcccagctaattttttgtg-tttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgaactcgtgatccgcctgcctcggcctcccaaagtgctgggattacagacgtgagccacc s panTro5.chr3 200098190 290 + 202621043 tttatttat---ttttttttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaatctccacctcctgggttcacgccattctcctgcctcagcctcccaagcagctgggactacaggcgcccaccaccacgcccagctaattttttgtg-tttttagtagagacggggtttcaccgtgttagccaggatagtctcgatctcccgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagacgtgagccacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 77776 289 + 190779 tttattta----tttattttttgagacagagtctcactctgtcacccaggctggagtgcggtggtgtgatctcggctcactgcaatctccacctcctgggttcacgccattctcctgcctcagcctcccaagcagctgggactacaggcgcccaccaccacgcccagctaattttttgtg-tttttagtagagacggggtttcaccgtgttagccaggatagtctcgatctcccgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagacgtgagccacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 42747 293 + 106623 tttatttattttttttttttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaatctctgcctcctgggttcacgccattctcctgcctcagcctcccaagcagctgggactacaggcgcccgccaccacgcccagctaattttttgtg-tttttagtagagacggggtttcaccgtgttagccaggatagtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagacgtgagccacc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120851855 293 + 123690457 tttcttcttctttttttttcttgagacggagtctcgctctgtcgcccagcctggagtgcagtggcacgatctcagctccctgcaatctccacctcctgggttcacgccattctcctgcctcagcctcccaagtagttgggactacaggtgcccgccaccacgcccagctaattttttgtg-tttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacctgcctcaacctcccaaagtgctgggattacaggcgtaagccacc i nomLeu3.chr11 I 2287 C 0 s cerAty1.NW_012004056v1 470991 280 + 16847902 ------------tttatttatttagacagagtctcactctgtcgcccaggctggaatgcagtggtgcgttctcagctcactgcaacctccgcctctcgggttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggcgctgaccaccacgcctggct-actctttgta-tttttaatagagacagggtttcaccatattggccaggctggtctcgaattcctaaccttgtgattcgcccgcctcagcctcccaaagtgctgggattataggcatgagccacc i cerAty1.NW_012004056v1 C 0 I 203 s chlSab2.chr15 407051 279 - 91754291 ------------tttgtctatttagacagagtctcactctgtcgcccaggctggaatgcag-ggtgcgttctcagctcactgcaaccttcgcctctcgggttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggcgctgaccaccatgcctggct-actccttgta-tttttaatagagacagggtttcaccatattggccaggctggtcttgaattcctaaccttgtgattcgcccgcctcagccttccaaagtgctgggattataggcatgagccacc i chlSab2.chr15 C 0 I 203 s manLeu1.NW_012102020v1 564505 281 - 1977891 ------------tttatttatttagacagggtctcactctgtcgcccaggctggaatgcagtggtgcgttctcagctcactgcaacctccgcctctcgggttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggcgctgaccaccacgcctggct-actctttgtattttttaatagagacagggtttcaccatattggccaggctggtctcgaattcctaaccttgtgattcgcccgcctcagcctcccaaagtgctgggattataggcatgagccacc i manLeu1.NW_012102020v1 C 0 I 203 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 534043 460 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e macFas5.chr2 58640 449 + 192460366 I e rheMac8.chr2 202450799 461 + 204787373 I a score=8525.000000 s hg38.chr3_KI270779v1_alt 114887 11 + 205312 atgcctggccg s panTro5.chr3 200098480 11 + 202621043 acgcctggccg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78065 11 + 190779 acgcctggccg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43040 11 + 106623 acgcctggccg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852148 11 + 123690457 gtgcccagccg i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e canFam3.chr33 29060551 669 + 31377067 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 534043 460 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e manLeu1.NW_012102020v1 564786 203 - 1977891 I e chlSab2.chr15 407330 203 - 91754291 I e cerAty1.NW_012004056v1 471271 203 + 16847902 I e macFas5.chr2 58640 449 + 192460366 I e rheMac8.chr2 202450799 461 + 204787373 I a score=7805.000000 s hg38.chr3_KI270779v1_alt 114898 6 + 205312 atcatg s panTro5.chr3 200098491 6 + 202621043 atcatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78076 6 + 190779 atcatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43051 6 + 106623 atcatg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852159 6 + 123690457 atcatg i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29061220 6 + 31377067 atcata i canFam3.chr33 I 669 C 0 e proCoq1.NW_012133858v1 7410285 591 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 534043 460 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e manLeu1.NW_012102020v1 564786 203 - 1977891 I e chlSab2.chr15 407330 203 - 91754291 I e cerAty1.NW_012004056v1 471271 203 + 16847902 I e macFas5.chr2 58640 449 + 192460366 I e rheMac8.chr2 202450799 461 + 204787373 I a score=4011.000000 s hg38.chr3_KI270779v1_alt 114904 2 + 205312 tg s panTro5.chr3 200098497 2 + 202621043 tg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78082 2 + 190779 tg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43057 2 + 106623 tg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852165 2 + 123690457 tg i nomLeu3.chr11 C 0 C 0 s proCoq1.NW_012133858v1 7410876 2 + 22200726 tg i proCoq1.NW_012133858v1 I 591 C 0 s canFam3.chr33 29061226 2 + 31377067 tg i canFam3.chr33 C 0 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e macNem1.NW_012014355v1 534043 460 + 19675229 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I e colAng1.NW_012118932v1 441201 3110 + 7796314 I e manLeu1.NW_012102020v1 564786 203 - 1977891 I e chlSab2.chr15 407330 203 - 91754291 I e cerAty1.NW_012004056v1 471271 203 + 16847902 I e macFas5.chr2 58640 449 + 192460366 I e rheMac8.chr2 202450799 461 + 204787373 I a score=689793.000000 s hg38.chr3_KI270779v1_alt 114906 93 + 205312 atttttcttctctagcctgttgatgtaacggattgcattagctgatttttgaatattgaaccagtcttgcatacctgggataaatctctgttg s panTro5.chr3 200098499 93 + 202621043 atttttcttctctagcctgttgatgtaatggattgcattagctgatttttgaatattgaaccagtcttgcatacctgggataaatctctgttg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78084 93 + 190779 atttttcttctctagcctgttgatgtaatggattgcattagctgatttttgaatattgaaccagtcttgcatacctgggataaatctctgttg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43059 93 + 106623 atttttcttctctagcctgttgatgtaacggattgcattagctgatttttgaatattgaaccagtcttgcatacctgggataaatctctgtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852167 93 + 123690457 atttttcttctctagcctgttgatgtcacggattgcattagctgatttttgaatagtgaactagtcttgcatacctgggataaatccctgttg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451260 93 + 204787373 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctattg i rheMac8.chr2 I 461 C 0 s macFas5.chr2 59089 93 + 192460366 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctattg i macFas5.chr2 I 449 C 0 s macNem1.NW_012014355v1 534503 93 + 19675229 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctattg i macNem1.NW_012014355v1 I 460 C 0 s cerAty1.NW_012004056v1 471474 93 + 16847902 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctgttg i cerAty1.NW_012004056v1 I 203 C 0 s chlSab2.chr15 407533 93 - 91754291 atttttcttctctagtttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctgttg i chlSab2.chr15 I 203 C 0 s manLeu1.NW_012102020v1 564989 93 - 1977891 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctgttg i manLeu1.NW_012102020v1 I 203 C 0 s colAng1.NW_012118932v1 444311 93 + 7796314 atttttcttctctagcttgttgatgtaacagattatattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctgttg i colAng1.NW_012118932v1 I 3110 C 0 s proCoq1.NW_012133858v1 7410878 93 + 22200726 atttttcttctttagcctgttaatatgatggattacattagctaagttttgaattttgaactagccttgcatacctgggataaatcccacttg i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29061228 92 + 31377067 atttttcttctttattctgttgatgtgatagattgcactaattgattttcgattgttgaatcagccttgca-acctggactaaatgccacttg i canFam3.chr33 C 0 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e aotNan1.NW_018503669v1 58030 2356 - 69927 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I e calJac3.chr17 920761 3482 - 74750902 I e saiBol1.JH378146 449222 3058 + 17725628 I a score=175720.000000 s hg38.chr3_KI270779v1_alt 114999 17 + 205312 gtcatggcctataattc s panTro5.chr3 200098592 17 + 202621043 gtcatggcctataattc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78177 17 + 190779 gtcatggcctataattc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43152 17 + 106623 gtcatggcctataattc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852260 17 + 123690457 gtcatggcctataattc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451353 17 + 204787373 gtgatggcctataattc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59182 17 + 192460366 gtgatggcctataattc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 534596 17 + 19675229 gtgatggcctataattc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 471567 17 + 16847902 gtgatagcctataattc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 407626 17 - 91754291 gtgatggcctataattc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565082 17 - 1977891 gtgatagcctataattc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444404 17 + 7796314 gtgatcgcctataattc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924243 17 - 74750902 gtcatggcctataattc i calJac3.chr17 I 3482 C 0 s saiBol1.JH378146 452280 17 + 17725628 gtcatggcctataattc i saiBol1.JH378146 I 3058 C 0 s aotNan1.NW_018503669v1 60386 17 - 69927 gtcatggcctataattc i aotNan1.NW_018503669v1 I 2356 I 2 s proCoq1.NW_012133858v1 7410971 17 + 22200726 gttgtggcacataatta i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29061320 17 + 31377067 ttcatggcatgtaattc i canFam3.chr33 C 0 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I e cebCap1.NW_016107444v1 412315 3308 - 6778120 I a score=2606270.000000 s hg38.chr3_KI270779v1_alt 115016 256 + 205312 tttttacatattgttgaactgtatttgctaatattttgttggtaatttttgcatctatg----tgagatatattggtctatagtc-----gtcttgtaatgtctttgtcccgttttggcattagggtgacagtgac------aaatgacttaggaagtattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcc-ccttaaatatctgctaaaattcaccagcgaactcatctgtgctgtgtgcttgctTCTTG s panTro5.chr3 200098609 256 + 202621043 tttttacatattgttgaactgtatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtc-----gtcttgtaatgtctttgtctggttttggcattagggtgacagtgac------aaatgacttaggaaatattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcc-ccttaaatatttggtaaaattcaccagcgaactcatctgtgctgtgtgcttgctTCTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78194 256 + 190779 tttttacatattgttgaactgtatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtc-----gtcttgtaatgtctttgtctggttttggcattagggtgacagtgac------aaatgacttaggaaatattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcc-ccttaaatatttggtaaaattcaccagcgaactcatctgtgctgtgtgcttgctTCTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43169 256 + 106623 tttttacatattgttgaactgtatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtc-----gtcttgtaatgtctttgtctggttttggcattagggtgacagtgac------aaatgacttaggaagtattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcc-ccttaaatatttggtaaaattcaccagcgaactcatctgtgctgcgtgcttgctTCTTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852277 256 + 123690457 tttttacatattgttgaactctatttgctaatattttgttggtaatttttgcatctgtg----tgagagatattggtctatagtc-----atcttgtaatgtctttgtctggttttggtactagggtgacactgac------aaatgacttaggaagtattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcc-ccttaaatattcggtaaaatgcaccagcgaactcatctgtgctgtgtgcttgcttcttG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451370 260 + 204787373 tttttacgtattgttgaactcaatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtcag-tcgtcttgtaatggttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctgctgcttctgtcttctagaaaagattgcagaaaataggtattattttc-ccttaaatatttggtaaaattcaccagcgaagtcatctatgctgtgtgcttactTCTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59199 260 + 192460366 tttttacgtattgttgaactcaatttgctaatatttggttggtaatttttgcatctatg----tgagagatattggtctatagtcag-tcgtcttgtaatggttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctgctgcttctgtcttctagaaaagattgcagaaaataggtattattttc-ccttaaatatttggtaaaattcaccagcgaagtcatctatgctgtgtgcttactTCTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 534613 260 + 19675229 tttttacgtattgttgaactcaatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtcag-tcgtcttgtaatggttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctgctgcttctgtcttctagaaaagattgcagaaaataggtattattttc-ccttaaatatttggtaaaattcaccagcgaagtcatctatgctgtgtgcttactTCTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 471584 250 + 16847902 tttgtacgcattgttgaactcaatttgctaatattttgttggtaa-ttttgcatctatg----tgagagatattggtctatagtcag-tcgtcttgtaatgtttttgtctggttttggcattagggtgacactgac------aaatgacttaggaagtattcctcctgcttctgtcttccagaaaagattgcagaaaataggtat----------ttaaatatttggtaaaatccaccagcgaagtcatGTGTGCTGTGTGCTTACTTCTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 407643 260 - 91754291 tttttacgtattgttgaactcaatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtcag-ttgtcttgtaatgtttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctcctgcttctgtcttccagaaaagattatagaaaataggcattatttcc-ccttaaatatttggtaaaattcaccagctaagtcatctatgttgtgtgcttgctTCTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565099 260 - 1977891 tttttacgcattgttgaactcaatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtcag-tcgtcttgtaatgtttttgtttggttttggcattagggtgacactgac------aaatgacttaggaagtattcctcctgcttctgtcttccagaaaagattgcagaaaataggtattatttcc-ccttaaatatttggtaaaatccaccagtgaagtcatGTGTGCTGTGTGCTTACTTCTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444421 254 + 7796314 tttttacatattgttgaactcaatttgttaatattttattgataatttttgcatctatg----tgagagatattggtctatagtcag-tcgtgttgtaatgtttttgtctggttttggtattagggtgacagtgac------aaatgacttaggaagtattcctcctgcttctgtcttccagaaaagattacagaaaataggtattatttcc-ccttaaatatttggtaaaattc------gaagtcatcTGTGCTGTGTGCTTACTTCTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924260 246 - 74750902 tttttatatattgttgaacttgatttgctaata-tttgttgctaatttttgcatcttcg----tgacagatactggtctatagtc-----ttctggtaacgtctttg----gtttcggtattagggtgacactgac------caatgacttagggggtag---tcctgcttctgtcttctggaaaagattgcacaaaatagg---tattttctccttaaatattttgcacaattcaccagcgaacccctctgtgttgtgtgcttAATTCTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 452297 244 + 17725628 tttttacatattgttgaacttgatttgctagtattttgttgctaatttttgcatctttg----tgagaggtactggtctgtagtc-----ttctggtgatgtctttg----gttttggtattagagtgaca------------aatgacttagggagtag---tcctgcttctgtcttctggaaaagattgcagaaaataggtattattttctccttaaatatttggtataattcaccagcgaacccctctgtgttgtgtgcttAATTCTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 415623 246 - 6778120 tttttacata-tgttgaacttgatttgctaatattttgttgctaatttttgcatctttg----tgagagatactggtctttagtc-----ttctggtaatgtctttg----gttttggtattagagtgaca------------aatgacttagggagtagtcctcctgcttctgtcttctggaaaagattgcagaaaataggtattattttctccttaaatatttggtataattcaccagtgaacccctctgtgttgtgtgcttAATTCTTG i cebCap1.NW_016107444v1 I 3308 C 0 s aotNan1.NW_018503669v1 60405 251 - 69927 tttttatatattgttgaacttgatttgctagtattttgttgctaatttttgcatctt------tgagagctactggcctgtagcc-----ttctggtactgtctttg----gttttggtgtgagagtgacactgac------aaacgactcagggagtagtcctcctgcttctctcttctggaaaagatggcagaagataggtattattttctcctgaaatatttggtaaaattctccagcgaacccctctgTGTTGTGTGCTGAATTCTTG i aotNan1.NW_018503669v1 I 2 C 0 s proCoq1.NW_012133858v1 7410988 247 + 22200726 tttttatacattgttggattcaatttactaatattttgttgagtatttttgcatctatgttcatgagagatattggtctgtagttttctttttttataatgtctttgtctgattttggtattgg----------at------gaatgacttaggaagtattccctctgcttctatcttctggaaaagattgtagagagttggtataatttattccttaaatgtttggtagaattcaccagtgaacccatc---------tgCTTAATTCTTG i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29061337 265 + 31377067 tttttattcactgttggattttatttgctaatgttttgttgaagatttttgcatctatgttcatgagagatattcctgtagggtt------tttttttttttttctttctggttttggtat-agggtaacgctggcctcatagactgagttaggaggtattccctctgcttcaatcttctgaaagagattatagagaactgaaagagtctcttcctgcagtgtttggtagaactcaccagtgaatccatttgggctatgtacttAATTCTTG i canFam3.chr33 C 0 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885822 1 + 6579706 I a score=260404.000000 s hg38.chr3_KI270779v1_alt 115272 19 + 205312 ATAAATGAATGCTGTGACT s panTro5.chr3 200098865 19 + 202621043 ATAAATGAATGCTGTGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78450 19 + 190779 ATAAATGAATGCTGTGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43425 19 + 106623 ATAAATGAATGCTGTGACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852533 19 + 123690457 ATAAATGAATGCTGTGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451630 19 + 204787373 ATAAATGAATGTTGTGACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59459 19 + 192460366 ATAAATGAATGTTGTGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 534873 19 + 19675229 ATAAATGAATGTTGTGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 471834 19 + 16847902 ATAAATGAATGTTGTGACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 407903 19 - 91754291 ATAAATGAATGTTGTGACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565359 19 - 1977891 ATAAATGAATGTTGTGACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444675 19 + 7796314 ATAAATGAATGTTGTGACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924506 19 - 74750902 AGAAATGAATGCTGTGACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 452541 19 + 17725628 GTAAATGAATGCTGTGACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 415869 19 - 6778120 ATAAATGAATGCTGTGACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 60656 18 - 69927 AGAAATGAATGCTGTGAC- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7411235 19 + 22200726 ATAAATGAATGCTGCGGCT i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29061602 19 + 31377067 ATAAATGAATGCTAGGATT i canFam3.chr33 C 0 I 127 s dasNov3.JH569502 3885823 19 + 6579706 ATAAATGAATGCTGTGACC i dasNov3.JH569502 I 1 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I a score=1243147.000000 s hg38.chr3_KI270779v1_alt 115291 108 + 205312 GCAGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTATGTAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTC s panTro5.chr3 200098884 108 + 202621043 ACAGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78469 108 + 190779 ACAGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43444 108 + 106623 ACAGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGAAGAGTGGCTTCACCTATTG--GGAGAAGTAATTCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852552 108 + 123690457 ACGGTTTTGTATGGAGATTCCATTACATTCCACTTTGGGCCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451649 108 + 204787373 ATGGTTTCGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCATCACCCACTG--GGAGAAGTCATTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59478 108 + 192460366 ATGGTTTCGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCATCACCTATTG--GGAGAAGTCATTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 534892 108 + 19675229 ATGGTTTCGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCATCACCTATTG--GGAGAAGTCATTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 471853 108 + 16847902 ATGGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTAAATAGGAGAGTGACTTCACCTATTG--GGAGAAGTCATTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 407922 108 - 91754291 ATGGTTTTGTATAGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGACTTCACCTATTG--GGAGAAGTCATTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565378 108 - 1977891 ATGGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCCACAGCTTTGTATATAGGAGAGTGACTTCACCTATTG--GGAGAAGTCATTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444694 108 + 7796314 ATGGTTTTGTATGAAGACTTCATTACATTCCATTTTGGGGCATATGAGGGTAAAGCCACAGCTTTGTACATAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924525 107 - 74750902 GTGGTTTTGTATGGAGACTTCATTACATTACACTTTGGGGAGTATGGTGGTAGAGCTACGGCTCTGTACATAAGAGGGTGGCTTTGCCCACTG--GGGGAA-TCCTCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 452560 108 + 17725628 GTAGTTTTGTATGGAGACTTCATTACATTACACTTTGAGGAGTCTGATGGTAAAGCTACAGCTCTGTACGTAAGACAGTGGCTTCGACTACTG--GGAGAAGTCATTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 415888 108 - 6778120 ATGTTTTTGTATGGAGACTTCATTACATTGCACTTTGGGGAGTCTAATGGTAAAGCTACAGCTCTGTACATAAGACAGTGGCTTTGCCTATTG--GGAGAACTCATTCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 60674 106 - 69927 -TGGTTTTGTGTGGAGACTTCATTACATTGCACTTTGGGGAGTATGATGGTAAA-CTATAGCTCCGTGCATAAGAGACCAGCTTCGCCTATTG--GGAGAAGTCATTCTC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7411254 103 + 22200726 ATGATTTTATATGGAGACTTGATTA-----CACTTTGGGGCTCATTAGGGTAAAGCTATAGCCTTATAAGCAGAAGAGTGGCTTCACCAGCTG--GAAGAAGTCATTCTC i proCoq1.NW_012133858v1 C 0 I 114 s canFam3.chr33 29061748 101 + 31377067 GTGGTTTTATATGGAGGCTTGATTA-----CACTTTGGGGTGTTTGAGGGTAAAGTCACAACGTTGCATGTATGGGAGGGGCTTCACCTACTGTTAAGAAAAGCAT---- i canFam3.chr33 I 127 C 0 s dasNov3.JH569502 3885842 101 + 6579706 ATGGTTTTCTATTGAGACCTGATTA-----CACTTCAAGGCCTCTGAAGGTGGAACCACAGCCCTGGGCACTAG-GGGTGG-TTTGCCTGCTG--GGAAAAGCCACTCTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I a score=68960.000000 s hg38.chr3_KI270779v1_alt 115399 7 + 205312 CATGTAA s panTro5.chr3 200098992 7 + 202621043 CATGTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78577 7 + 190779 CATGTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43552 7 + 106623 CATGTAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852660 7 + 123690457 CATATAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451757 7 + 204787373 CATATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59586 7 + 192460366 CATATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535000 7 + 19675229 CATATAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 471961 7 + 16847902 CATATAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 408030 7 - 91754291 CATGTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565486 7 - 1977891 CATATAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444802 7 + 7796314 CATATAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924632 7 - 74750902 CAGATAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 452668 7 + 17725628 CATATAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 415996 7 - 6778120 CATATAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 60780 7 - 69927 CATATAA i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 3885943 7 + 6579706 TGTGTAA i dasNov3.JH569502 C 0 I 24 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29061849 0 + 31377067 C a score=304837.000000 s hg38.chr3_KI270779v1_alt 115406 25 + 205312 --------GTTTGGAGTCTGCTCAGATCAAAGA s panTro5.chr3 200098999 25 + 202621043 --------GTTTGGAGTCTGCTCAGATCAAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78584 25 + 190779 --------GTTTGGAGTCTGCTCAGATCAAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43559 25 + 106623 --------GTTTGGAGTCTGCTCAGATCAAAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852667 25 + 123690457 --------GTTTGGAGTCTGCTCAGATCAAAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451764 33 + 204787373 CGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59593 33 + 192460366 CGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535007 33 + 19675229 CGTAGACCGTTTGGAGTCTGCTCAGATCAAAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 471968 33 + 16847902 CGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 408037 33 - 91754291 TGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565493 33 - 1977891 CGTAGACAGTTTGGAGTCTCTTCAGATCAAAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444809 33 + 7796314 TGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924639 33 - 74750902 AGTGGGCAGTTTGGAGTCTGCTCAGATCAAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 452675 33 + 17725628 AGCGGACAGTTTGGGGTCTGCTCAGATCAAAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416003 33 - 6778120 AGTGGACAGTTTGGAGTCTGCTCAGATCAAAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 60787 33 - 69927 AGGGGACAGTCTGGAGTCTGCTCAGATCCAAGA i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29061849 26 + 31377067 -------AGTTTAGGGTCTGCTCAGGTCAGAGA i canFam3.chr33 C 0 I 13 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I a score=4367257.000000 s hg38.chr3_KI270779v1_alt 115431 472 + 205312 Ctgtgaaggttaatattgagtgtcaacttgattggactgaaggatgcaacgtattgttcctgggtgtctctctgtgagggtgttggcaatggagactaatatttgaatcagtggactgggagaggcaggctcactctcagtctgggtggacacaatctaatcagctgccagcatagcca----g-aataaagcaggcagaggaatgtggaagga-ttacactggctaagtcttccagccttcatctttctcccgtgctggatgcttcctgccctcaaacatcggacttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctcttgggccttctgccacagacttaaggttacactgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacagcctattgtgg-acctcactttgtgatcgtgtgagtc s panTro5.chr3 200099024 472 + 202621043 Ctgtgaaggttaatattgagcgtcaacttgattggactgaaggatgcaacgtattgttcctgggtgtctctctgtgagggtattggcaacggagactaatatttgaatcagtggactgggagaggcaggctcactctcagtctgggtggacacaatctaatcagctgccagcgtagcca----g-aataaagcaggcagaggaatgtggaagga-ttacactggctaagtcttccagccttcatctttctcccgtgctggatgcttcctgccctcaaacatcggacttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctcttgggccttctgccacagacttaaggctgcactgtcagtttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacagcctattgtgg-acctcaccttgtgattgtgtgagtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 78609 472 + 190779 Ctgtgaaggttaatattgagcgtcaacttgattggactgaaggatgcaacgtattgttcctgggtgtctctctgtgagggtattggcaacggagactaatatttgaatcagtggactgggagaggcaggctcactctcagtctgggtggacacaatctaatcagctgccagcgtagcca----g-aataaagcaggcagaggaatgtggaagga-ttacactggctaagtcttccagccttcatctttctcccgtgctggatgcttcctgccctcaaacatcggacttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctcttgggccttctgccacagacttaaggctgcactgtcagtttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacagcctattgtgg-acctcaccttgtgattgtgtgagtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 43584 472 + 106623 Ctgtgaaggttaatattgagtgtcaacttgattggattgaaggatgcaacgtattgttcctgggtgtctctctgtgagggtgttggcaacggagactaatatttgaatcagtggactgggagaggcaggctcactctcagtctgggtggacacaatctaatcagctgccagcgtagcca----g-aataaagcaggcagaggaacgtggaagga-ttacactggctaagtcttccagccttcatctttctcccgtgctggatgcttcctgccctcaaacatcagacttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctcttgggccttctgccacagacttaaggctgcactgtcggcttccctgcttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacaccctattgtgg-accgcaccttgtgatcgtgtgagtc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120852692 472 + 123690457 Ctgtgaaggttaatattgagcgtcaacttgattggactgaaggatgcaaagtattgttcctgggtgtctctctgtgagggtgttggcaacggagactaatatttgaatcagtggactgggagaggcagactcactctcagtctgggtggacacaatctaatcagctgccagtatagcca----g-aataaagcaggcagaggaacgtggaagga-ttatactggctaagacttccagccttcatctttctcccatgctggatgcttcctgccctcgaacattggatttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctctcgggcctttgaccacagacttaaggctgcactgtcggcttccctacttttgagatcttgggattcagactggcttccctgcttgtcagcttgcagacggcctattgtgg-acctcaccttgtgatcctgtgagtc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202451797 473 + 204787373 Ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtcttggcaacggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtaggcacaatctaatcagctgccagtgtagcta----gaaataaagcaggcagaggaacatggaggga-ttacactggctgagtcttccagccttcatctttcccccgtggtagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacactggtggtttgccaggggctctcgggccttcggccacagacttgaggctgcactgtcggcttccgtacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgattgtgtgagtc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 59626 473 + 192460366 Ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtcttggcaacggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagcta----gaaataaagcaggcagaggaacatggaggga-ttacactggctgagtcttccagccttcatctttcccccatgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacactggtggtttgccaggggctctcgggccttcggccacagacttgaggctgcactgtcggcttccgtacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgattgtgtgagtc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535040 473 + 19675229 Ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtcttggcaacggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagcta----gaaataaagcaggcagaggaacatggaggga-ttacactggctgagtcttccagccttcatctttcccccgtgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacactggtggtttgccaggggctctcgggccttcggccatagacttgaggctgcactgtcggcttccgtacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgattgtgtaagtc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 472001 472 + 16847902 Ctgtgatggttaatattgagtgttaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtgttggcaacggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagttgccagtgtagcta----g-aataaagcaggcagaggaacacggaagga-ttacactggctgagtcttccagccttcatctttcccccgtgctggatgcttcctgccctcgaacatcggactccaagctcttcagcttttggactcttggactcacaccagtggtttgccaggggctctcgggcctttggccacagactgaaggctgcgctgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgatcgtgtgagtc i cerAty1.NW_012004056v1 C 0 I 3072 s chlSab2.chr15 408070 472 - 91754291 Ctgcaatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtgttggcaatggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagcta----g-aataaagcaggcagaggaacatggaagga-ttacactagctgagtcttccaggcttcatctttcccccgtgctagatgcttcctgccctcgaacatcggatttcaagttcttcagcttttggactctcggacttacaccggtggtttgccaggggctctcaggcctttggccacagacttaaggctgcactgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagatggcctattgtgg-acctcaccttgtgatcgtgtgagtc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 565526 472 - 1977891 Ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtgttggcaacggagactaatatttgcatcagtggactgggagaggcagacccactctcaatctgagtagacacaatctaatcagttgccagtgtagcta----g-aataaagcaggcagaggaacacggaagga-ttacactggctgagtcttccagccttcatctttcccccgtgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacaccagtggtttgccaggggctcttgggcctttggccacagacttaaggctgcgctgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgatcgtgtgagtc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 444842 464 + 7796314 Ctgtgacagttaatatggagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtgttggcaacagagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagcta----g-aataaagcaggcagaggaa--------ga-ttacactggctaagtcttccagccttcatctttctcccgtgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacaccggtggtttgccaggggatctcgggcctttggccacagacttaaggctgcgctgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacagcctattgtgg-acctcaccttgtgatcgtgtgagtc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 924672 469 - 74750902 Ctgtgatggctaatagtgagtgtcaacttgattggactg-aggaggcaaagtgttgctcctgggtgta--tctgtgaggctgttgccaatggaggctaatatttgaatcagt-gactgggagaggcagacccaccctgaatctgggtagccacaatcttatcagttgccagcatacctc----g-agtaaggcaggcagaggaacatggaaggagttcctcttgctgagtcttccagcc-tcatcatcctcccaggctgggtgcttcctgccctcaaacatcagactccaggttcttcagctgtgggactcttgcacttacacctgcggtttgccaggggcccttgggccctcggccacagactgaaggctgcactatcggcttccctacttctgaggtcttgggattcagaccggcttccttacttcttagcttgcagacagcctgttgtggaacttcaccatatgatcatgtgagtc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 452708 467 + 17725628 Ctgcgatggcaaatagtgagtgtcaacttgattggactg-aggatgcgaagtactgttcct-ggtgtg--tctgtgagggtgttgccaacggaggctaatatttgagtcagtggaccagaggaggcagacccaccctgaatccgggtaggcacaatctaatcagctgccagcatgccca----g-agcaaggcaggcagaggaacatggaagga-ttagacttgctgagtcttccaacc-tcatctttctccctcgctgggtgcttccggccctcaaatgtcggactccaggttcttcagctgttggactcgtgcactgacaca-gtggtttgccctgggccctcgggcccttggctgcagactgaaggctgcaccatcggcttccctccttctgaggtcttgggattcagactagcttccttacttcttagcttgcagacggcctgttgtggaacttcaccttgtgatcatgtgagtc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416036 460 - 6778120 Ctgtgatggcaaatagtgagtgtcaacttgattggactg-aggatgcaacgtattgttcct-ggtgtg--tctgtgagggtgttgccaatggagactaatatttgaatcagtggaccgggagaggcagacccactctgaatctgggtaggcacaatctaatcagctgccagcataccca----g-agcaaggcaggcagaggaacatggaagg--ctagacttgctgagtcttccagcc-tcacgtttctcccacgctgggtgcctcctgccctcaaacgtcggacttgaggttcttcagctgttggactcttgcacttacaccagtggtttgacaggggccctcgggcccttggccacagactgaaggctgcactgtcggcttccctgcttctgaggtc---ggattcagaccggcttc----tttcttagcttgcagacagcctgtggtggaacttcaccttgtgatcatgtgagtc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 60820 450 - 69927 Ctgtgacggctaatagtgagtgtcaacttgattggaccg-aggatgcaaagtattgttcctgggtgta--tctgtgagggcgttgccgacggagactaatatttgaatcagtgggctgggaggggcagacccaccctgaacctgggcaggcaccatctaaccagctgccagcacacctgacgtg-tgtaaggcgggcagaggaacacggaagga-ctagacttgct--gtcttccagcc-tcatctttctcccacgcggggtgcttcctgccctcaaacatcggactccaggctcttcagctgttggactcttgcacttacgccagtgat---------------------tcagccacagactgaaggctgcaccgtcggcttccctacttctgcggtcttgggattcagaccagcttcctttcttctcagcttgcagacggcctgttgtggaacttcaccttgtgatcacgtgagtc i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I e canFam3.chr33 29061875 13 + 31377067 I a score=653426.000000 s hg38.chr3_KI270779v1_alt 115903 89 + 205312 gatactccttcataaactcccctttatatatacatctatcctattagtcctgaccctctagggaacc----ctaatacaAAGATtatatata--t s panTro5.chr3 200099496 89 + 202621043 gatactccttcataaactcccctttatatatacctctatcctattagtcctgaccctctagggaacc----ctaatacaAAGATtatatata--t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79081 89 + 190779 gatactccttcataaactcccctttatatatacatctatcctattagtcctgaccctctagggaacc----ctaatacaAAGATtatatata--t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44056 89 + 106623 gatactccttcataaactcccctttatatatacatctatcctattagtcctgaccctctagggagcc----ctaatacaAAGATtatatata--t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853164 89 + 123690457 gatactccttcataaactcccctttatatatacatctatcctattagtcctgaccatctagggaacc----ctaatacaAAGATTTtatata--t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452270 92 + 204787373 gatactccttcataaactcccctttatatatacatctatcctattagtcctgtccctctagggaaccctgactaacacaAAGATCatatgta--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60099 92 + 192460366 gatactccttcataaactcccctttatatatacatctatcctattagtcctgtccctctagggaaccctgactaacacaAAGATCatatgta--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535513 92 + 19675229 gatactccttcataaactcccctttatatatacatctatcctattagtcctgtccctctagggaaccctgactaatacaAAGATCatatgta--- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 408542 93 - 91754291 gatactccttcataaactcccctttatatatacatctatcctattagccctgtccctctagggaaccctgactaatacaAAGATCatatgtat-- i chlSab2.chr15 C 0 I 55 s manLeu1.NW_012102020v1 565998 93 - 1977891 gatactccttcataaactcccctttatatatacatctatcctattagtcctgtccctctagggaaccctgactaatacaAAGATCatatgtat-- i manLeu1.NW_012102020v1 C 0 I 36 s colAng1.NW_012118932v1 445306 89 + 7796314 gatactccttcataaactcccctttatgtatacatctatcctattagtcctgtccctctagggaacc----ctaatacaAAGATCATATGTA-T- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925141 84 - 74750902 aatactccttaataaactccccttcgtatacacat-----ctattagtcctgtccctctggagaacc----ctaatacaAAGGCCGTATATA--T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453175 84 + 17725628 aacactccttcataaactctccttcgtatacacat-----ctattagttctgtccctctagagaacc----ctAGTACAGAGGTTTTATATA--T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416496 84 - 6778120 aatactccttagtaaactctgcttcgtatacacat-----ctattagtcctgtccctctagagagcc----ctAGTACAAAGGTCATATATA--T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 61270 84 - 69927 aatactccttaataaactccccttcatatacacat-----ctattagtcctgtccctctagagaacc----ctaatacaAAGGTCATCTATA--T i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I e canFam3.chr33 29061875 13 + 31377067 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=4853.000000 s hg38.chr3_KI270779v1_alt 115992 2 + 205312 at s panTro5.chr3 200099585 2 + 202621043 at i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79170 2 + 190779 at i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44145 2 + 106623 at i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853253 2 + 123690457 at i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 925225 2 - 74750902 AT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453259 2 + 17725628 AT i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 416580 2 - 6778120 AC i cebCap1.NW_016107444v1 C 0 I 17 s aotNan1.NW_018503669v1 61354 2 - 69927 AC i aotNan1.NW_018503669v1 C 0 I 17 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I e canFam3.chr33 29061875 13 + 31377067 I e macNem1.NW_012014355v1 535605 0 + 19675229 C e colAng1.NW_012118932v1 445395 0 + 7796314 C e manLeu1.NW_012102020v1 566091 36 - 1977891 I e chlSab2.chr15 408635 55 - 91754291 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I e macFas5.chr2 60191 0 + 192460366 C e rheMac8.chr2 202452362 0 + 204787373 C a score=12880.000000 s hg38.chr3_KI270779v1_alt 115994 45 + 205312 --tctttatatatatatatatatata-------------------tattttttttttttttttttt s panTro5.chr3 200099587 40 + 202621043 --tctttatatatatatatatatata-------------------ta-----tttttttttttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79172 36 + 190779 --tctttatatatatatatatatata----------------------------tttttttttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44147 25 + 106623 --tct-----tatatatatatatata----------------------------------tttttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853255 29 + 123690457 -------atatatatatatatatata------------------------------taAttttttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452362 24 + 204787373 --tttatatatatatacacatacata---------------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60191 24 + 192460366 --tttatatatatatacacatacata---------------------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535605 24 + 19675229 --tttatatatatatacacatacata---------------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 445395 41 + 7796314 ----tatatatatatatatatatatatgtatgtatgtatatatat--------------------- i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 925227 15 - 74750902 -----------ACATATAAAGAGAGA---------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453266 26 + 17725628 cacacacacacacacacacaTATGGA---------------------------------------- i saiBol1.JH378146 I 5 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I e canFam3.chr33 29061875 13 + 31377067 I e aotNan1.NW_018503669v1 61356 17 - 69927 I e cebCap1.NW_016107444v1 416582 17 - 6778120 I e manLeu1.NW_012102020v1 566091 36 - 1977891 I e chlSab2.chr15 408635 55 - 91754291 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=12285.000000 s hg38.chr3_KI270779v1_alt 116039 3 + 205312 ttt s panTro5.chr3 200099627 3 + 202621043 ttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79208 3 + 190779 ttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44172 3 + 106623 ttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853284 3 + 123690457 ttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452386 3 + 204787373 ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60215 3 + 192460366 ttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535629 3 + 19675229 ttt i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 408690 3 - 91754291 ttt i chlSab2.chr15 I 55 C 0 s colAng1.NW_012118932v1 445437 3 + 7796314 ttt i colAng1.NW_012118932v1 I 1 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I e canFam3.chr33 29061875 13 + 31377067 I e aotNan1.NW_018503669v1 61356 17 - 69927 I e cebCap1.NW_016107444v1 416582 17 - 6778120 I e calJac3.chr17 925242 0 - 74750902 C e saiBol1.JH378146 453292 0 + 17725628 C e manLeu1.NW_012102020v1 566091 36 - 1977891 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=2361345.000000 s hg38.chr3_KI270779v1_alt 116042 275 + 205312 gagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattataggcgtgtgccaccatgcccagcgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtctcaaactcctggcctcaagtgatctgcccgccttggcctcccaaaatgttgggattacaggcgtgagccaccgtgc s panTro5.chr3 200099630 275 + 202621043 gagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattataggcgtctgccaccatgcccagcgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtctcaaactcctggcctcaagtgatctgcccgccttggcctcccaaagtgttgggattacaggcgtgagccactgtgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79211 275 + 190779 gagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattataggcgtctgccaccatgcccagcgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtctcaaactcctggcctcaagtgatctgcccgccttggcctcccaaagtgttgggattacaggcgtgagccactgtgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44175 275 + 106623 gagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcctgggttcaagagattctcctgccccagcctcctgagtagctgggattataggcatgtgccaccatgcccagcgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtctcaaactcctggcctcaagtgatctgccgaccttggcctcccaaagtgttgggattacaggcgtgagccaccgtgc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853287 275 + 123690457 gagacagagtcttgctctgtcacccaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaacagattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccatgcccagtgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtttcaaactcctggcctcaagtgatccacccgcctcgacctcccaaagtgttgggattacaggcatgagccgcggtgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452389 276 + 204787373 gagacagagtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtgccaccatgcccagctaatttttgtatttttagtagagacagcatttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtgagccactgtgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60218 276 + 192460366 gagacagagtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtgccaccatgcccagctaatttttgtatttttagtagagacagcatttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtaagccactgtgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535632 276 + 19675229 gagacagagtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcctcttgagtagctgggattacaggcacgtgccaccatgcccagctaatttttgtatttttagtagagacagcatttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtaagccactgtgc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 408693 274 - 91754291 gagac--agtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtgcccccacgcccagctaatttttgtatttttagtagagacagcgtttcaccatgtcagccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggactacaggcgtgagccactgtgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566127 273 - 1977891 gagacagagtcttgctctgtcacccaggctggagtgcagtgacatgatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtg---ccacgcccagctaatttttgtatttttagtagagaccgcgtttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcggcctctcaaagtgttgggattacaggtgtgagccactgcgc i manLeu1.NW_012102020v1 I 36 C 0 s colAng1.NW_012118932v1 445440 276 + 7796314 gagacagagtctttctctgtcacccaggctggagtgcagtggcatgatctcagctcgctgcaacctccgcctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacatgccaccatgcccagctaatttttgtatttttagtagagacagcgtttcaccacgtcggccaagctggtctcaaactcttggcctcaagtgatctgcccgcctcagcctcccaaagtgttgggattacaggcgtgagccactgtgc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925242 275 - 74750902 gagagagaggcttgctctgccgcccaggctggagtgcagtggcgtgatcttagctcactgcaacctctacctcccagattcaagagatcctcctgcctctgcctcctgagtagctgggattacaggtgtgcaccaccatgcctggctaatttttgta-ttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtggtccgcctgccttggccttccaaagtgttggaattacaggcgtgagccaccgcac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453292 275 + 17725628 gagagagaggcgagctctgtcacccaggctggagtgcagtggcatgatcttagctcactgcaaactctacctcccagattcaagagattctcctgcctcagcctcctcagtagctgggattataggcatgcaccaccatgcctggctaatttttgta-ttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcttggcctcaagtgatccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416599 275 - 6778120 gagagagaggcgagctctgtcgcccaggctggagtgcagtggcacgatctcagctcactgcaacctctacctcccagattcaaaagattctcctgcctcaacctcctgagtagctgggattacaggcgtgcaccaccatccctggctaatttttgtg-ttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtgatccgcctgccttggcctcccaaagtgctgggattacaggcatgagccactgcac i cebCap1.NW_016107444v1 I 17 C 0 s aotNan1.NW_018503669v1 61373 267 - 69927 gagagagaggctagctctgtcgcccaggctggagcgcaggggcgcgatcttagctcactgcaacctctacctcccagattcaagagattctcctgcctcaacctcctgagtagctgggattacaggtgtgtaccaccacgcctggctaatttttgta-tattagtagagatagggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtgat--------cttggccttccaaagtgttgggatcacaggcatgagccactgcac i aotNan1.NW_018503669v1 I 17 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e dasNov3.JH569502 3885950 24 + 6579706 I e canFam3.chr33 29061875 13 + 31377067 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=185655.000000 s hg38.chr3_KI270779v1_alt 116317 22 + 205312 ccaaccAAAGAT---ATTCCTTTGG s panTro5.chr3 200099905 22 + 202621043 ccaaccAAAGAT---ATTCCTTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79486 22 + 190779 ccaaccAAAGAT---ATTCCTTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44450 22 + 106623 ccaaccAAAGAT---ATTCCTTTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853562 22 + 123690457 ccagccAAAGAT---ATTCCTTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452665 22 + 204787373 ccaaccAAAGAT---ATTCCTTTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60494 22 + 192460366 ccaaccAAAGAT---ATTCCTTTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535908 22 + 19675229 ccaaccAAAGAT---ATTCCTTTGG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 408967 22 - 91754291 ccaaccAAAGAT---ATTCCTTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566400 22 - 1977891 ccaaccAAAGAT---ATTCCTTTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 445716 22 + 7796314 ccaaccAAAGAT---ATTCCTTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925517 25 - 74750902 ccAATCAAAGATCATATTTCTTTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453567 24 + 17725628 ccAATC-AAGATCATATATCTCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416874 25 - 6778120 ccAATCAAAGATCATATTTCTTTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 61640 25 - 69927 ccAATCAAAGATCACATTTCTTTGG i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 3885974 25 + 6579706 CTGATCAAAGATCATCTTTCTCTGA i dasNov3.JH569502 I 24 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29061875 13 + 31377067 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=228195.000000 s hg38.chr3_KI270779v1_alt 116339 25 + 205312 GAGCTTCCTTCAACAGCACTTAccc s panTro5.chr3 200099927 25 + 202621043 GAGCTTCCTTCAACAGCACTTAccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79508 25 + 190779 GAGCTTCCTTCAACAGCACTTAccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44472 25 + 106623 GAGCTTCCTTCAACAGCACTTAccc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853584 25 + 123690457 GAGCTTCCTTCAACAGCACTTAccc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452687 25 + 204787373 GAGCTTCCTTCAACAGCACTTAccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60516 25 + 192460366 GAGCTTCCTTCAACAGCACTTAccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535930 25 + 19675229 GAGCTTCCTTCAACAGCACTTAccc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 408989 25 - 91754291 GAGCTTCCTTCAACAGCGTTTAccc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566422 25 - 1977891 GAGCTTCCTTCAACAGCATTTAccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 445738 25 + 7796314 GAGcttccttcagcagcacttcccc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925542 24 - 74750902 GTGCTTCCTTCA-CACCACTTACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453591 24 + 17725628 GTGCTTCCTTCA-Caccacttacgc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416899 24 - 6778120 GTGCTTCCTTCA-CACCATTTAccc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 61665 24 - 69927 GTGCTTCCTTCA-Caccacttaccc i aotNan1.NW_018503669v1 C 0 C 0 s canFam3.chr33 29061888 25 + 31377067 GAACTTCCTCCAGCaccacttgctc i canFam3.chr33 I 13 C 0 s dasNov3.JH569502 3885999 25 + 6579706 CAATTTCCCACACCACCACTTAGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e otoGar3.GL873829 407222 12 - 608964 I e mm10.chr16 65424179 927 - 98207768 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=136039.000000 s hg38.chr3_KI270779v1_alt 116364 11 + 205312 acccgcaagaa s panTro5.chr3 200099952 11 + 202621043 acccgcaagaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79533 11 + 190779 acccgcaagaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44497 11 + 106623 acccgcaagaa i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853609 11 + 123690457 acccacaagaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452712 11 + 204787373 acccgcaagag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60541 11 + 192460366 acccgcaagag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535955 11 + 19675229 acccgcaagag i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 409014 11 - 91754291 acccgcaagag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566447 11 - 1977891 acccgcaagag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 445763 11 + 7796314 acccgcaagag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925566 11 - 74750902 ACCCACAAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453615 11 + 17725628 acctacaagag i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416923 11 - 6778120 acccacaagac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 61689 11 - 69927 acccacaagag i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 407234 11 - 608964 acccacaggag i otoGar3.GL873829 I 12 C 0 s canFam3.chr33 29061913 11 + 31377067 acccacaagag i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886024 11 + 6579706 ACCCACAAGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I e cerAty1.NW_012004056v1 472473 3072 + 16847902 I a score=269632.000000 s hg38.chr3_KI270779v1_alt 116375 24 + 205312 tgagcttgaacacctgctttgcac s panTro5.chr3 200099963 24 + 202621043 tgagcttgaacacctgctttgcac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79544 24 + 190779 tgagcttgaacacctgctttgtac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44508 24 + 106623 tgagcttgaacacctgctttgcac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853620 24 + 123690457 tgagcttgaacacctgctttgcac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452723 24 + 204787373 tgagcttgaacacctgctttgcac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60552 24 + 192460366 tgagcttgaacacctgctttgcac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535966 24 + 19675229 tgagcttgaacacctgctttgcac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 475545 24 + 16847902 TGAGCTTGAACACCTGCtttgtac i cerAty1.NW_012004056v1 I 3072 C 0 s chlSab2.chr15 409025 24 - 91754291 tgagcttgaacacctgctttgcac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566458 24 - 1977891 tgagcttgaacacctgctttgcac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 445774 24 + 7796314 tgagcttgaacacccgctttgcac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925577 24 - 74750902 TAAGCTTGAACACTGACTTTGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453626 24 + 17725628 tgagcttgaacatcgactttgcac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416934 24 - 6778120 tgagcttgaacacagactttgtgc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 61700 24 - 69927 tgagcttgaacaccggctttgcac i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 407245 24 - 608964 tgagcccaagcacagagtttgttt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29061924 24 + 31377067 tgagcctgagcaccaggatcatgt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886035 24 + 6579706 TGAGCCTGGCCTCCAGGAATGGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7411357 114 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I a score=4581823.000000 s hg38.chr3_KI270779v1_alt 116399 345 + 205312 catgtgacctcctttctgaccccatga-ctacattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattgtggACCAATTG-TGTTGGAGTTATTACACCAGATAGG--TGTAAAAGTCCCGCCTGCT----GAGAG------GATTCTGTGGAAGCTGATCAGGTTGCTGGGG-CAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA s panTro5.chr3 200099987 346 + 202621043 catgtgacctcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattgtggACCAATTG-TGTTGGAGTTATTACACCAGATAGG--TGTAAAAGTCCCACCTGCT----GAGAG------GATTCTGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79568 346 + 190779 catgtgacctcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattgtggACCAATTG-TGTTGGAGTTATTACACCAGATAGG--TGTAAAAGTCCCACCTGCT----GAGAG------GATTCTGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 44532 346 + 106623 catgtgacctcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattgtggACCAATTG-TGTTGGAGTTATTACACCAGATAGG--TGTAAAAGTCCCGCCTGCT----GAGAG------GATTCTGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGATAGAGGTGAA--------GGGCTCTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853644 346 + 123690457 catgtgacctcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttggggtttagaactaagaggcagctacctagtttctgcataaagtt----ggaactgaaattttctagacacaggaattgtggACCAATTG-CGTTGGAGTTATTACACCAGATATG--TGTAAAAGTCCCGCCTCCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAGGACTCCATCTGGGGTCCGGGAAAGGACAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202452747 346 + 204787373 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattggggACCAATGG-TGTTGGAGTTGTTACACCAGATAGG--TGTAAAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCCGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCAGGAAAGGACAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60576 346 + 192460366 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattggggACCAATGG-TGTTGGAGTTGTTACACCAGATAGG--TGTAAAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCCGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCAGGAAAGGACAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 535990 346 + 19675229 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagagggagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattggggACCAATGG-TGTTGGAGTTGTTACACCAGATAGG--TGTAAAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCCGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCAGGAAAGGACAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 475569 349 + 16847902 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagagGCAGCCACCTAGTTTC-GCGTAAAGTTTTGCAGAATTGAGATTTTCTAGACACAGGAATTGGGGACCAATGG-TGTTGGAGTTGTTACACCAGATAGG--TGTAAAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409049 358 - 91754291 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagtttctctcttcaggg---------atttgggatttagaactaagaggcagccacctagtttctgcATAAAGTTTTGCAGAATTGAGATTTTCTAGACACAGGAATTGGGGACCAATGG-TGTTGGAGTTGTTACAGCAGATAGG--TGTAAAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGGGCTGAAGGGCTGTGGGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566482 350 - 1977891 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atttgggatttagaactaagaggcagccacctagtttctgcATAAAGTTTTGCAGAATTGAGATTTTCTAGACATAGGGATCGGGGACCAATGG-TGTTGGAGTTGTTACACCAGATAGG--TGTAAAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCCGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 445798 346 + 7796314 catgtgacttcctttctgaccccatga-ctgcattttattggaccaggcattaacaactgatgtaaattggaccagtcagattctctcttcaggg---------atctgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaactgagattttctagacacaggaattggggACCAATGG-TGCTGGAGTTGTTACACCAAATAGG--TGTACAAGTCCTGCCTGCT----GAGAG------GATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAG--AACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925601 339 - 74750902 CACGTGACCTCCTTTCTCACCCCATGA-TTGCATTTTATTGGACCAGGCATAAACAACTGATGTAAATGGGACCAATCAGATTCTGTCTTCAGGG---------ATTTGGGATTTAGAACTAAGAGGCAGCTACCTAGTTTCTGCATGAAGTT----GGAA-TGAGGTTTT------GCAGGAAGTGTGGACCAATTG-TGTTGGAGTTGTTACACCAGATAGG--TGTAGAAGTCCTGCCTGCT----GAGAG------GATCATGCGGGAGCTGATCAGGTTGCTGGGGACTAGTAGAGGCAGGGTAGGGCTGAG--------GGGCTGTGGAATGGAG--AACCTCAGAACACTCCATCTGGGGTCCCGGAAAGGACGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453650 337 + 17725628 cacgtgaccccctttctcaccccatgg-ttgcattttattggaccaggcataaacaattgatgtaaattggaccaaccagattctctcttcaggg---------atttggaatttagaactaagaggtagctacctagtttctgcATAAAGTT----GGAATTGAGGTTTT------GCAGGAATTGCGGACCAACTG-TGTTGGAGTTGCTACACCAGATAGG--TTTAAGAGTCCTGCCTGCT----GAGAG------TATTATGTGGGAGCTGATCAGGTTGCTGGGGAC---TAGAGGCAGGGTAGGGCTGAG--------GGGCTGTGGGATGCAG--AACCTCAGAGCACTCCATCTGGGGTCCCGGAAAGGACGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 416958 340 - 6778120 cacgtgacctcctttctcacgccatga-ttgcattttattggaccaggcataaacaacggacgtaaactggaccaatcagattctctcttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgaggtttt------gcaggaattgtggaccagttg-tgttGGAGTTGTTACACCAGATAGG--TGTAAGAGTCCTGCCTGCT----GAGAG------GATGATGTGGGAGCTGATCAGGTTGCTGGGGACTAGTAGAGGCAGGGTAGGGCTGAG--------GGGCTGTGGGATGGAG--AACCTCAGAACACTCCGTCTGGGGTCCCGGAAAGGACGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 61724 332 - 69927 catgtga---cctttctcaccccatga-tcgccttttactggaccaggcataaacaactgacgtaaattggaccaatcagattctcccttcaggg---------atttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgaggtttt------gcaggaattgtggACCAATTG-TGTTGGAGTTGTGACACCAGATAGG--TGTAAAAGTCCCACCTGCT----GAGAG------GATTATGTGGGAGCTGATCAGGTTGCTGGGGAT-AGTAGAGGCAGGGTAGGGCTGAG--------GGGCTGTGGGATGGAG--AACCTCAGAACAC----TCTGGGGTCCCGGAAAGGACGGA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7411471 353 + 22200726 catgtgacttcctttctgtaaccatgg-ccacacttgattggaccagggatggacaactgacataaattgggccaatcagattcatttttcaggg---------atttgggatttaggaccaacaggcagctacctagtttctgcatagaatt----ggaattgaggtgttttagacacaaaagttgtggACCAACTGTTGTTGGAATTGTTACACCAGATGGCTGTATAAAAGTTCCGCCTGCT----GAGAGAG--ATGATGATGTGAAAGCTGATCAGGTTGCTGGGAACAAGTGGAGATAGAATAGGGCTGAA--------GGACTGTGGGATGGAG--AACCTCAGAAGACTCTACCTGGGGTCTAGGAAAGGACAGA i proCoq1.NW_012133858v1 I 114 I 269 s otoGar3.GL873829 407269 334 - 608964 catgtggcttcctttcgggcactatgg-ccagatttgatttgatca-ggatggacaattgacataaattgagccaacaagatttccttttcaggg---------atttgg---ttaagagatctaggcaggtacctagtttctgcatggaatt----ggaattgaggaactcaagacacagaagttatggATCAATTGTTGTTGGAATTGTTACACCAGTTAAT--TATAAAAGTTCTGCCTCCT----AAGAGAGA-ATGATGACGTGGAGGCTGATCAT--------------GTGGAGATAGAGTGGGGCTGAG--------GGATTGTAGGGTGGAG--AAACTCAGAAAACTCCACTTGGAGTCTAGGAAAGGACAGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29061948 344 + 31377067 catgtgacctcctttcctaccctatggtccacacttatttggaccagtgatagacaattgacataagctggactaatcatattctcccctcaggg---------agttgggatttaggagcaagaggcagctctctagtttctccatagaggt----ggaattgaggtattctagacctaggagctgtggACCAGTTTTTGTTGGACTAGTTACACCAGATAGG--TGT-GACGTTCTTTCTGCTAGGAGAGAA------GATGAGGTGGAAACCGATCATGTGGCTGGGAAT------GGGCAGAGAGGGACCAAG--------GGATCATGGGGTGAAG--AGACTCAGAAGGCTCCAG-TGGGGCTCAGGAAAGGACAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886059 320 + 6579706 CCTGCGACCTCCCTTCTCTCCCTATGG-CTACACTTGCCTGGA-------------------ATAAACTGAGCCACTCAGGTCCTCTCCTCAGGACAAATCCGTCTCTCGAATTTAGGACCAAGTGGCAGCTACGTAGTGTCAGCACGGAGCT----GGAACTGAGATGCTCTAGATGCAGGAGTTGTGGACCAGTAA-TG-------------AACAGATAGG--TGTTGATGTCCTGCCTGCC----AAGAGGAACAGGACGACGTGGAAACTAATCAGGCTGCTGGGGACAGAT--------GATGTGGCTGTG--------GGACTGTGGAGTGGAGGAGAACCCAGAAGGGTCAG---GGGGCCCAGGAAGAGACAGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I a score=2064493.000000 s hg38.chr3_KI270779v1_alt 116744 189 + 205312 G-AGGGTATATGAGGGGTCGGGCCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCGCTCTTCCATGAAACGCAGGCGGTGGGGACAGCCACCAG-ACAGGTAAACACACTGTGCATTGAT-CCTTTTACGACTTTTGTGAAACTGATGG s panTro5.chr3 200100333 190 + 202621043 GAAGGGTATATGAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACACACTGTGCATTGAT-CCTTTTACGACTTTTGTGAAATTGATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 79914 190 + 190779 GAAGGGTATATGAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGACAGGCCACCAG-ACAGGAAAACACACTGTGCATTGAT-CCTTTTACGACTTTTGTGAAATTGATGG i panPan2.chrUn_NW_014024201v1 C 0 I 1954 s gorGor5.CYUI01000576v1 44878 189 + 106623 C-AGGGTATATGAGGAATGGGGTGCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCCGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACGCAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACACGCTGTGCATTGAT-CCTTTTACGACTTTTGTGAAATTGATGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120853990 189 + 123690457 G-AAGGTATATTAGGGCTCGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGCTGGTTCCTGGAAATGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACACACTCTACATTGAT-CCTTTTACGACTTTTGTGAAATTGATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453093 186 + 204787373 G-AAGG--TATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACACACTGTACATTGAT-CCTTTTATGAC-TTTTTGAAATTGATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60922 186 + 192460366 G-AAGG--TATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACACACTGTACATTGAT-CCTTTTATGAC-TTTTTGAAATTGATGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536336 186 + 19675229 G-AAGG--TATTAGGGATTGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTGCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACGCACTGTACATTGAT-CCTTTCATGAC-TTTGTGAAATTGATGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 475918 188 + 16847902 G-AAGGTATATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGCTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACACACTGTACATTGAT-CCTTTTATGAC-TTTGTGAAATTGATGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409407 188 - 91754291 G-AAGGTATATTAGGGATTGGGTCCTCCAGATCTAAGGGTGGGGTGG-TGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTGTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAG-ACAGGAAAACGCACCGTACACTGAC-CCTTCTATGAC-TTTGTGAAATTGATGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 566832 188 - 1977891 G-AAGGTATATTAGGGATCGGGTCCTCCAGATCTAAGGGTGCGGTGG-TGGCATGTTTCTTGAGTTGGCTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCAGTGGGGACAGCCAACAG-ACAGGAAAACGCACTGTACATTGAT-CCTTTTATGAC-TTTGTGAAATTGATGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446144 188 + 7796314 G-AAGGCATATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGTGG-CGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGACATGGTTTAATCCCTCTTCCATGAAACACAGGTGGTGGGGACAGCCACCAG-ACAGGAAAACACACTGTACATTGAT-CCTTTTATGAC-TTTGTGAAATTGATGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 925940 181 - 74750902 G-AAGGCATATTAGGGATCAGGTCCTCCAGATCTAAGGGTGGGTGGG-TGGCACGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCCAAAATGGTTTAATCCCTCTTCCATGAAAGACAGGC-GTGGGGACAGCCACCAG-ACAGGAAA----ACTG--CATTTAT-CCTTTTACAAC-TTTGTGAAATTGATAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 453987 185 + 17725628 G-GAGGTCTATTAGGGATCAGGTCCTCCAGATCTAAAGGTGGGTAGG--GGCACGTTTCTTGAGTTGGTTCCTGGACAGGGAGCCAAAATGGTCTAATCCCTCTTCCATGACACATGGGT-GTGGGGACAGCCACCAG-ACAGGAAAAGACACTG--CATTTATCCCTTTTACAGT-TTTGTGAGATTGATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417298 184 - 6778120 G-AAGGTATATTAGGGATCAGGTCCTCCAGATCTAAGGGTGGGGGGT--GGCACGTTTCTTGAGTTGGTTCCTGGACAGGGGGCCAAAATGGTTTAATCCCTCTTCCATGAAACAGGGGC-ATGGGGACAGCCACCAG-ACAGGAAAAGACACTG--CATTTAT-CCTTTTACAAT-TTTGTGAAATTGACGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 62056 168 - 69927 G-AAGGTATATTAGGGATCAGGTCCTCCAGATCTAAGGGTGGTGGGC--GGCACTTTTCTTGAGTTGGTTCCCGGAAAGGGAGCCAAAATGGTTTAATCCCTCTTCCATGAAACACAGGC-GTGG-----------------GGAGAAGACACTG--CATTTAT-CCTTTTACAAT-TTTGTGAAATTGATGG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 407603 189 - 608964 -AAAAGTATATTAGGGATTAGGTGCCCCAGATATAAAGATGGAGTGGAGGGCATGCTTCTTGAGATTGCT-CTGGAAAGGGAGCTGAAATGACTTAATTCCTTTTCTAGAGAACTCAAGCAGTGGGGACAGCAATTAG-ACAGAAAAATATACTGTGTGTTTAT-TCTTTTGCTATTTTTGTAAAAATGATAG i otoGar3.GL873829 C 0 I 7 s canFam3.chr33 29062292 164 + 31377067 G-AGAGTATATTAGG-ATTGTGTGCTCCAGGTCTAAGGAGGGGGTGGGTGGCACGCTTCTCAAATTGGTTCTTGGAAAGGGA--------GGTGTAAGCCCTCCTCCAGGGAACACA----GTGGGAGCAA-GAGCAG-ATAGGTAAAGGCACTGTGTATTTAC-CCTCTCGGAAC---TGTTA--------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886379 191 + 6579706 G-AAAGTGAACCAGGGACTGGGTACCCCGGGCCTAAGGATGGGGTGGGTGGCATGCTCCTTGAGTTGGTTCCTGGAAAGGAAGCTGAAATGGCTTAATCCATTCTCCAGGGAACACTGGCAGTGGGCACAGGAGCCAGAACAGGAAAAGCCACTATGAATTCTG-AAGCTTATCATTTTTGTGAAACTGATGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7411824 269 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I a score=698473.000000 s hg38.chr3_KI270779v1_alt 116933 67 + 205312 -------ACAGGCAGGCAGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCT s panTro5.chr3 200100523 67 + 202621043 -------ACAGGCAGGCAGGGAGGGGTCCTGGG--AGAGGGTCTGGGGCACTCCATCTTGGGGTAACTCTTTCGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82058 67 + 190779 -------ACAGGCAGGCAGGGAGGGGTCCTGGG--AGAGGGTCTGGGGCACTCCATCTTGGGGTAACTCTTTCGCT i panPan2.chrUn_NW_014024201v1 I 1954 C 0 s gorGor5.CYUI01000576v1 45067 66 + 106623 -------ACAGGCAGGCAGGGAGGGGTCCT-GG--AGAGGGTCTGGGGCATTCCATCTTGGGGTATCTCTTTCACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854179 67 + 123690457 -------ACAGGCAGGCAGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453279 67 + 204787373 -------ACAGGCAGGTGGGGAGGGGTCCTGGG--AGAGAGTCTGGGTCACTCCATCTTGGGGTATCTCTTTCGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61108 67 + 192460366 -------ACAGGCAGGTGGGGAGGGGTCCTGGG--AGAGAGTCTGGGTCACTCCATCTTGGGGTATCTCTTTCGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536522 67 + 19675229 -------ACAGGCAGGTGGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476106 67 + 16847902 -------ACAGGCAGGTGGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTTGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409595 67 - 91754291 -------ACAGGCAGGTGGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567020 67 - 1977891 -------ACAGGCAGGTAGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTTGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446332 67 + 7796314 -------ACAGGCAGGTGGGGAGGGGTCCTGGG--AGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926121 64 - 74750902 -------ACAAGCAGGCGGGGAGGGGTCCTGGGAGAGACAGTCTGGGGCACTCCATCTTGGGGTATCTCTG----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454172 64 + 17725628 -------ACAAGCAGGCAGGGAGGGGTCCCAGGACAGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTG----- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417482 64 - 6778120 -------ACAAGCAGGCAGGGAGGGGTCCTGGGAGAGAGAGTCTGGGGCACTCCATCTTGGGGTATCTGTG----- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 62224 64 - 69927 -------ACAAGCAGGCAGGGAGGAGTCCTGGGAGAGAGAGTCTGGGGCACTCCATCTTGGGGTATCTCTG----- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 407799 69 - 608964 -------TCAGAAAAACAGGGAGAGGTCCCAGGACAGAGAGTCTGGGATACTCCATTTAGTGGTATCTCTGGCAGT i otoGar3.GL873829 I 7 C 0 s canFam3.chr33 29062456 49 + 31377067 --------------------GAGGGTGCCCGGG----TGAGTCTGGGCTACTCCATGTGGGGGTGTCTCTACT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886570 73 + 6579706 ACAGAGATCAGCAAGGCAGGGAGGGGTCCTGGGAGAGAGAGTATGGAATCAGCCCTGCGGGCTTAGCTGGACC--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7411824 269 + 22200726 I e micMur3.chr1 25892401 3613 - 114275543 I e mm10.chr16 65424179 927 - 98207768 I a score=157177.000000 s hg38.chr3_KI270779v1_alt 117000 16 + 205312 CTCCTCCTTAGCGGGC s panTro5.chr3 200100590 16 + 202621043 CTCCTCCTTAGCGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82125 16 + 190779 CTCCTCCTTAGCGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45133 16 + 106623 CTCCTCCTTAGCGGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854246 16 + 123690457 TTCGTCCTTAGCGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453346 15 + 204787373 CTCCTCCTTAGAGGG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61175 15 + 192460366 CTCCTCCTTAGAGGG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536589 15 + 19675229 CTCCTCCTTAGAGGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476173 15 + 16847902 CTCCTCCTTAGAGGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409662 15 - 91754291 CTCCTCCTCAGAGGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567087 15 - 1977891 CTCCTCCTTAGAGGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446399 15 + 7796314 CTCCTCCTTAGAGGG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926185 15 - 74750902 -TCCTCCTTAGAGGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454236 15 + 17725628 -TCCTCCTTAGAGGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417546 11 - 6778120 -TCCTCCTTAGA---- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 62288 15 - 69927 -TCCTCCTTAGAGGGT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896014 16 - 114275543 CTCCTCCCTAGAGGGC i micMur3.chr1 I 3613 C 0 s otoGar3.GL873829 407868 10 - 608964 ------CTTAGAGGGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29062505 16 + 31377067 GTCCTCCTCAGAAGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886643 14 + 6579706 CTCCCCCTCAGAGG-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7411824 269 + 22200726 I e mm10.chr16 65424179 927 - 98207768 I a score=31593.000000 s hg38.chr3_KI270779v1_alt 117016 3 + 205312 GAA s panTro5.chr3 200100606 3 + 202621043 GAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82141 3 + 190779 GAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45149 3 + 106623 GAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854262 3 + 123690457 GAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453361 3 + 204787373 GAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61190 3 + 192460366 GAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536604 3 + 19675229 GAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476188 3 + 16847902 GAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409677 3 - 91754291 GAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567102 3 - 1977891 GAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446414 3 + 7796314 GAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926200 3 - 74750902 GAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454251 3 + 17725628 GAA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 62303 3 - 69927 GAA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896030 3 - 114275543 CAG i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 407878 3 - 608964 CAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425106 3 - 98207768 GAA i mm10.chr16 I 927 C 0 s canFam3.chr33 29062521 3 + 31377067 CAG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7411824 269 + 22200726 I e dasNov3.JH569502 3886657 0 + 6579706 C e cebCap1.NW_016107444v1 417557 0 - 6778120 C a score=744917.000000 s hg38.chr3_KI270779v1_alt 117019 58 + 205312 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGGTGATGTGGAGCATGAAGCAAGGT-------- s panTro5.chr3 200100609 58 + 202621043 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGGTGATGTGGAGCATGAAGCAAGGT-------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82144 58 + 190779 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGGTGATGTGGAGCATGAAGCAAGGT-------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45152 58 + 106623 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGGTGATGTGGAGCATGAAGCAAGGT-------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854265 55 + 123690457 GCTATGGCC--TGCACT---------GGGGT-AGGG---GAAGAAGGTGATGTGGATTATGAAGCAAGGT-------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453364 58 + 204787373 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAAGGT-------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61193 58 + 192460366 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAAGGT-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536607 58 + 19675229 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAAGGT-------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476191 58 + 16847902 GCTTTGGCC--CTTGCT---------GGGGT-GGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAAGGT-------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409680 55 - 91754291 GCTTTGGCC--TGTGCT---------GGGGT-GGGG---GAAGAAGATGATGTGGAGCCTGAAGCAAGGT-------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567105 58 - 1977891 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAAGGT-------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446417 58 + 7796314 GCTTTGGCC--TGTGCT---------GGGGT-GGGGGAAGAAGAAGATAATGTGGAGCCTGAAGCAAGGT-------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926203 57 - 74750902 ACTTTGGCC--TGTGTT----------GGGT-GGGGGAAGAAGCAGATGATGTGGAGCATGAAGCAAGGT-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454254 57 + 17725628 ACTCTGGCC--TGTGTT----------GGGT-GGGGGAAGAAGCAGGTAATGTGGAGCATAAGGCAAGGT-------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417557 42 - 6778120 ---------------------------GGGT-GGGGGAAGAAGCAGGTGATGTGGAGCATGAAGCAACAT-------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 62306 56 - 69927 ACTGTGGCC--TGTGTT----------GGGT-GGGGG-AGGAGCAGGTGATGTGGAGCGTGAAGCAAGGT-------- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896033 58 - 114275543 GCTTTGGCC--TGTGTT---------GGGGT-GGGGGATGAAGAGGGTGATGTGGAGTGTGAAGCAAGGT-------- i micMur3.chr1 C 0 I 133 s proCoq1.NW_012133858v1 7412093 59 + 22200726 GCTTTGGCC--TGTGTT---------GGGGTGGGGGGATGAAGAAGGTGATCTGGAGTGTGAAACAAGGT-------- i proCoq1.NW_012133858v1 I 269 I 133 s otoGar3.GL873829 407881 54 - 608964 GCTTTAGCC--GGTGTT---------GGGGT-AGGTGATGAA----GTGACCTGGAGTGTGAAGCAAGGT-------- i otoGar3.GL873829 C 0 I 7 s mm10.chr16 65425109 53 - 98207768 GCACTGGCTGAGGTGCA---------GGGCT-GGGTGAGAAAGGAG-------GAAGCAAGGACCAAGCC-------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29062524 64 + 31377067 GCTTTGGCT--TGCATTTCTTCCCCCTGGGA-AGGG---GAAGAAGGTGACGTGGAGGCGGAAGCAAGGA-------- i canFam3.chr33 C 0 I 6 s dasNov3.JH569502 3886657 63 + 6579706 --CTTGGCG--TGTACT---------GGGGT-GGGG-AGGAGAGAGCTGATGTGGAGGTTGTGGCAAGGGCCCATGTC i dasNov3.JH569502 C 0 C 0 a score=1692378.000000 s hg38.chr3_KI270779v1_alt 117077 172 + 205312 TGGGGTGGAGCAACTGAGGGTTTCCAGCA-TG-GGTAACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTAATGCTCCACTG-CTGC-CCAGCACTTAACCTCCACACTCTGTGCCCTCTGATGGTTGGGAGAA--G--TCTGTGTCCAGCCCTTCGGCCACCAGAAGAAAATCAAGAA s panTro5.chr3 200100667 173 + 202621043 TGGGGTGGAGCAACTGAGGGTTTCCAGCA-TG-GGTAACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTAATGCTCCACTGCCTGC-CCAGCACTTAACCTCCACACGCTGTGCCCTCTGATGGTTGGGAGAA--G--CCTGTGTCCAGCCCTTCGGCCACGAGAAGAAAATCAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82202 173 + 190779 TGGGGTGGAGCAACTGAGGGTTTCCAGCA-TG-GGTAACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTAATGCTCCACTGCCTGC-CCAGCACTTAACCTCCACACTCTGTGCCCTCTGATGGTTGGGAGAA--G--CCTGTGTCCAGCCCTTCGGCCACGAGAAGAAAATCAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45210 173 + 106623 TGGGGTGGAGCAACTGAGGGTTTCCAGCA-TG-GGTAACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACTGCCTGC-CCAGCACTTAACCTCCACACTCTGTGCCCTCTGATGGTTGGGAGAA--G--CCTGTGTCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854320 173 + 123690457 TGGGGTGGAGCAACTGAGGGCTTCCAGCA-TG-GGTGACC--AGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACCGCCTGC-CCAGCACTTAACCTCCACACTCGGTGCCCTCTGATGGTTGGGAGAA--G--CCTGTGCCCAGCCCTTCAGCCACCAGAAGAAAATCAGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453422 172 + 204787373 TAGGGTGGAGCAACTGAGGATTTCCAGCA-TG-GGTGACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCC-ACTGCTCCACCGCCTGC-CCAACACTTAACCTCCACACACTGTGCCCTCGGATGGTTGGGAGAA--G--CCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61251 172 + 192460366 TAGGGTGGAGCAACTGAGGATTTCCAGCA-TG-GGTGACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCC-ACTGCTCCACCGCCTGC-CCAACACTTAACCTCCACACACTGTGCCCTCGGATGGTTGGGAGAA--G--CCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536665 172 + 19675229 TAGGGTGGAGCAACTGAGGATTTCCAGCA-TG-GGTGACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCC-ACTGCTCCACCGCCTGC-CCAACACTTAACCTCCACACACTGTGCCCTCGGATGGTTGGGAGAA--G--CCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476249 173 + 16847902 TAGGGTGGAGCAACTGAGGATTTCCAGCG-TG-GGTGACC--TGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACTGCCTGT-CCAACACTTAACCTCCACACACTGTGCCCTCTGACGGTTTGGAGAA--G--CCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409735 173 - 91754291 TAGGGTGGAGCAACTGAGGATTTCCAGCA-TG-GGTGACC--GGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACTGCCTGC-CCAACACTTAACCTCCACACACTGTGTCCTCGGACGGTTGGGAGAA--G--CCTGTGCCCAGTCCTTTGGCCACCAGAAGAAAATCAGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567163 173 - 1977891 TAGGGTGGAGCAACTGAGGATTTCCAGCA-TG-GGTGACC--TGGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTTCTGCTCCACTGCCTGT-CCAACACTTAACCTCCACACACTGTGCCCTCTGACAGTTTGGAGAA--G--CCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446475 173 + 7796314 TAGAATGGAGCAACTGAGGATTTCCAGCA-TG-GGTGACC--GGGCTGAT-TAGGGCTGGAT----CCAGCTGACCCTACTGCTCCACCGCCTGT-CCAACACTTAACCTCCACACACTGTGCCCTCTGATGGTTGGAAGAA--G--CCTGTGACCAGCCCTTCGGGCACCAGAAAAAAATCAGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926260 168 - 74750902 TGGG--GGAGCAATGGAGGATTTCCAACA-TG-GCTAACCAAGGGCTGAC-CAGGGCTGGA-----CCAGCTGCCCCTACTACTCTACCACCTGC-CCAACACACCACCTCCACACCCTGCACCCTC----TGTTGGGAGAA--G--CCTGTGCCCAGCCCTTTGGCCACCAGAAGAAAATCAGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454311 171 + 17725628 T-GG--GGAGCAGCGGAGGATTTCCAACA-TG-GGTAACCAATGGCTGAC-CAGGGCTGGA-----CCAGCTGCCCCCACTCCTCTACCACCTGC-CCAGCACGCCACCTCCACACCCTGTGCCCTCAGATGGTTGGGAGAA--G--CCTGTGTTCAGCCCTTTGGCCACCAGAAGAAAATCAGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417599 169 - 6778120 TGGG--GGAGCAAGGGAGGATTTCCAACA-TG-GGTAACCAAGGGCTGAC-CAGGGCTGGA-----CCAGCTGCTCCTA---CTCTACCATCTGC-CCAACACGCCACCTCCACACCCTGTGCCCTCTGATGGTGGGGAGAA--G--CCTGTGCCCAGCCCTTTGGCCACCAGAAGAAAATCAGGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 62362 172 - 69927 TGGG--GGAGCAACGCAGGATTTCCAACA-TG-GGTAACCAAGGGCTGAC-CAGGGCTGGA-----CCAGCTGCGCCTACTCCTCCACCACCTGC-CCAACACGCCACCTCCACACCCTGTGCCCTCTGATGGTTGGGAGAA--G--CCTGTGCCCAGCCCTTTGGCCACCAGAAGAAAATCAGGAA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 407942 146 - 608964 AGAATTGGAGCAACTGA-GATTTCCAACA-TGAAGTAACTGAGAGCTGAT-TAGGACTGGAT----CCAGCCCTCCC--------------CTGT-CTCCCAC----------CACCCTGTGCCTTCCCACGGTTGGGAGA------CCTGT--CTAGCTCTTCAGCCACCAGAAAAAAATCAGAG- i otoGar3.GL873829 I 7 C 0 s mm10.chr16 65425162 178 - 98207768 AGCGTTGTGGCCACCGATG--CAGCAGCA-TGGGGCAGCCGGGAGCTGTCGTAGGGCTGGGCTCCACCATCTGAATTTTCCACCCCCCACCCTCC-CTAATATGCAACTGTCACA-ACTATGT-TTATGAGGAATGGAAGAACGT--GCTGTGCCTAACACTACAGCCACCAGAAGAAACCTGGTA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29062594 105 + 31377067 TGGGCTGGAGCAAC--AAGCTTCCCAACA-GA-----------------C-CGTGGCTGGTT----CCAACCCACCTCTCCCCTCCGCT-------------------------------------------------------C--CCTGTACCTAGCCTGTCAGCCACACAAGGAAAATCACCAG i canFam3.chr33 I 6 C 0 s dasNov3.JH569502 3886720 167 + 6579706 CCAGCTGCAGAAATGCAGGCTCCCGAACACCG-AGTGACT--GAGC-GAG-CAGGACT-GAT----TCAGC-----ACACTGCTCCTCGCCACACACCCACACTTAATCCCC-CACCCTGTGCTGTCTGCGGCTGAGGAAAG--GACCCTGTGCTCA--CCTCCAGTCACCAGAGGAAAATCATCAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412152 133 + 22200726 I e micMur3.chr1 25896091 133 - 114275543 I a score=1708817.000000 s hg38.chr3_KI270779v1_alt 117249 117 + 205312 TGGAATTCCTGGTTTTGGAGAC-ACAAAAAGTCAGAGAGACTTTATTTAAATAGAG-TTAATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATC s panTro5.chr3 200100840 113 + 202621043 TGGAATTCCTGGTTTTGAAGAC-ACAAAAAGTC----AGACTTTATTTAAATAGAG-TTGATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82375 113 + 190779 TGGAATTCCTGGTTTTGAAGAC-ACAAAAAGTC----AGACTTTATTTAAATAGAG-TTGATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45383 117 + 106623 TGGAATTCCTGGTTTTGAAGAC-ACAAAAAGTCAGAGAGACTTTATTTAAATAGAG-TTAATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854493 114 + 123690457 TGGAATTCCTGGTTTTGAAGAC-ACAAAAAGTCAGAGAGAC----TTTAAATAGAGTTTAATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453594 116 + 204787373 TAGAATCTCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61423 116 + 192460366 TAGAATCTCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536837 116 + 19675229 TAGAATCTCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476422 116 + 16847902 TGGAATCCCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 409908 116 - 91754291 TGGAATCCCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAATTATTTTG---CTTAACTTAGGGCCATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567336 116 - 1977891 TGGAATCCTTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446648 116 + 7796314 TGGAATCCCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTGAATTCGAAGTAAACCAGAAAG-TTTTGTGTGCAGAAACATTTTG---CTTAACTTAGGGCCATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926428 119 - 74750902 TAGAATCCCTGCTTCTGAACACAAAAAAAAGACAGAGGGACTTCATTTAAATAGACTTTAATTAGAAGTAAACCAGAGAA-TTTTATGTGCGGAAGCATTCTG---GTTAACTTAGAGCCATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454482 119 + 17725628 TAGAATCCCTGCGTTTGAAGACCAAAGAAAGTCAGAGGGACTTTATTTAAATAGACTTTAATTAGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCCTTTTG---GTTAACTTAGAGCCATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417768 118 - 6778120 TAGAATCCCTGCGTTTGAAGAC-AAAAAAAGTCAGAGGGACTTTATTTAAATAGACTTTAATTAGAAGTACACCAGAGAA-TTTTGTGTGCAGAAGCATTTTG---GTTAACTTAGAGCCATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 62534 118 - 69927 TAGAATCCCTGCTTTTGAAGAC-AAAAAAAGTCAGAGGGACTTTATTTAAATAGACTTTAATTAGAAGTAAACCAGAGAA-TTTTGTGTGCAGAAGCATTTTG---GTTAACTTAGAGCCATC i aotNan1.NW_018503669v1 C 0 I 429 s micMur3.chr1 25896224 116 - 114275543 TGGAATCCATGGCTTTGAAGAC-ACAAAAAGTCAGAGGGACTTTATTTAAATAGACTTTAATTAGAAGTAAACCAGAG---TTTTGTGTGCAGAAGCACTGTG---CTTAAATTAAGGCTATC i micMur3.chr1 I 133 C 0 s proCoq1.NW_012133858v1 7412285 116 + 22200726 TGGAATCCATGGTTTTGACGAC-ACAAAAAGTCAGAGGGACTTTATTTAAATAGACTTTAATTAGAAGTAAACCAGAG---TTTTGTGTGCAGAAGCATTGTG---CTTAACTTAGGGCTATC i proCoq1.NW_012133858v1 I 133 C 0 s otoGar3.GL873829 408088 117 - 608964 TAGAATCCATGGCTTTGAAGAC-ACAAAAAGTCAGAGGGACTTCATTTAAATAGACTTTAGTTAGAAGTAAACCAGAG-T-TTTTGTGTGCAGAAGCATTTTA---GTTAACTTACAGTTATC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425340 109 - 98207768 TGGAATCCATAG-TTTGAAGAC-ATAAAAAGATAGAGA--CTTTATTTAAATAGATTTTAATGAGAAGTAAGCCTGTG-----TTATATGTAAAAACATCTTG---GTAAATGTAAAGCCA-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29062699 120 + 31377067 TGGAATTCACAGCTTTGGAAAC-AC--AAAGTCAGAAGGATTTTACTTAAATAGACTTCAACTAGAAGGAAACTGGAGGGTTTTTTTATACAGATGAATTTTGGCTTTTAACTTGGAGCCATC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3886887 121 + 6579706 TGGAGTTCATGGCTCTGGAGAC-ACAAAAAGTCAGAGGGACTTTATTTAAATAGATTTTAATTAGAAGTAAACAAGAGAG-TTTTGTGTGCAAAAATATTTTGGTTTTTAACTTAGAGCCATC i dasNov3.JH569502 C 0 C 0 a score=17757.000000 s hg38.chr3_KI270779v1_alt 117366 2 + 205312 AC s panTro5.chr3 200100953 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82488 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45500 2 + 106623 AC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854607 2 + 123690457 AC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453710 2 + 204787373 AC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61539 2 + 192460366 AC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536953 2 + 19675229 AC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476538 2 + 16847902 AC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410024 2 - 91754291 AC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567452 2 - 1977891 AC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446764 2 + 7796314 AC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926547 2 - 74750902 CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454601 2 + 17725628 CC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 417886 2 - 6778120 CC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25896340 2 - 114275543 AC i micMur3.chr1 C 0 I 187 s proCoq1.NW_012133858v1 7412401 2 + 22200726 AC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 408205 2 - 608964 AT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425449 2 - 98207768 GT i mm10.chr16 C 0 C 0 s canFam3.chr33 29062819 2 + 31377067 AG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887008 2 + 6579706 AC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018503669v1 62652 429 - 69927 I a score=103093.000000 s hg38.chr3_KI270779v1_alt 117368 11 + 205312 CACAT-TATGAA s panTro5.chr3 200100955 11 + 202621043 CACAT-TATGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82490 11 + 190779 CACAT-TATGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45502 11 + 106623 CACAT-TATGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854609 11 + 123690457 CGCAT-TATGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453712 11 + 204787373 TGCAT-TATGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61541 11 + 192460366 TGCAT-TATGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536955 11 + 19675229 TGCAT-TATGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476540 11 + 16847902 TGCAT-TATGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410026 11 - 91754291 TGCAT-TATGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567454 11 - 1977891 TACAT-TATGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446766 11 + 7796314 TGCAT-TATGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926549 11 - 74750902 TGCAT-GATGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454603 11 + 17725628 TGCAT-GATGAA i saiBol1.JH378146 C 0 I 206 s cebCap1.NW_016107444v1 417888 11 - 6778120 TGCAT-GATGAA i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7412403 11 + 22200726 CCCAT-TATTAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 408207 11 - 608964 CCCAT-TATTAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425451 12 - 98207768 CACATCCATTAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29062821 11 + 31377067 CCCAT-TAGTAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887010 8 + 6579706 TTCAT-TAA--- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25896342 187 - 114275543 I e aotNan1.NW_018503669v1 62652 429 - 69927 I a score=32209.000000 s hg38.chr3_KI270779v1_alt 117379 3 + 205312 CTC s panTro5.chr3 200100966 3 + 202621043 CTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82501 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45513 3 + 106623 CGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854620 3 + 123690457 CTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453723 3 + 204787373 CTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61552 3 + 192460366 CTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536966 3 + 19675229 CTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476551 3 + 16847902 CTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410037 3 - 91754291 CTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567465 3 - 1977891 CTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446777 3 + 7796314 CTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926560 3 - 74750902 ATC i calJac3.chr17 C 0 I 5 s cebCap1.NW_016107444v1 417899 3 - 6778120 ATC i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7412414 3 + 22200726 CTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 408218 3 - 608964 TTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425463 3 - 98207768 CTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29062832 3 + 31377067 CTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887018 3 + 6579706 CTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25896342 187 - 114275543 I e aotNan1.NW_018503669v1 62652 429 - 69927 I e saiBol1.JH378146 454614 206 + 17725628 I a score=-94796.000000 s hg38.chr3_KI270779v1_alt 117382 3 + 205312 gt------------------------g s panTro5.chr3 200100969 3 + 202621043 TT------------------------T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82504 3 + 190779 TT------------------------T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45516 3 + 106623 TT------------------------T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854623 3 + 123690457 TT------------------------T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453726 11 + 204787373 TG----------------gtgtgtgtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61555 11 + 192460366 TG----------------gtgtgtgtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536969 3 + 19675229 TG------------------------g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476554 23 + 16847902 TG----gtgtgtgtgtgtgtgtgtgtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410040 11 - 91754291 TA----------------gtgtgtgtg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567468 11 - 1977891 TG----------------gtgtgtgtg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446780 27 + 7796314 TGgtgtgtgtgtgtgtgtgtgtgtgtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926568 2 - 74750902 tg------------------------- i calJac3.chr17 I 5 I 112 s saiBol1.JH378146 454820 2 + 17725628 tg------------------------- i saiBol1.JH378146 I 206 I 2 s cebCap1.NW_016107444v1 417902 2 - 6778120 TG------------------------- i cebCap1.NW_016107444v1 C 0 I 1 s proCoq1.NW_012133858v1 7412417 3 + 22200726 -----------------------TGG- i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65425466 3 - 98207768 -----------------------TGG- i mm10.chr16 C 0 C 0 s canFam3.chr33 29062835 3 + 31377067 -----------------------TGA- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887021 3 + 6579706 -----------------------CGG- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25896342 187 - 114275543 I e otoGar3.GL873829 408221 0 - 608964 C e aotNan1.NW_018503669v1 62652 429 - 69927 I a score=173448.000000 s hg38.chr3_KI270779v1_alt 117385 14 + 205312 tgtgtgtg--tg--tgtg s panTro5.chr3 200100972 14 + 202621043 tgtgtgtg--tg--tgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82507 14 + 190779 tgtgtgtg--tg--tgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45519 14 + 106623 tgtgtgtg--tg--tgtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854626 14 + 123690457 TGTGTGTG--TG--TGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453737 14 + 204787373 tgtgtgtg--ta--tgta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61566 14 + 192460366 tgtgtgtg--tg--tgta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536972 14 + 19675229 tgtgtgtg--tg--tgta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476577 14 + 16847902 tgtgtgtg--tg--tgta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410051 16 - 91754291 tgtgtgtg--tgtgtgta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567479 10 - 1977891 tgtgtgtg--tg------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446807 14 + 7796314 tgtgtgta--tg--cgtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926682 14 - 74750902 tgtgtgta--tg--tgtg i calJac3.chr17 I 112 C 0 s saiBol1.JH378146 454824 16 + 17725628 tgtgtgtaggtg--tgtg i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 417905 14 - 6778120 Cgtgtgtg--tg--tgtg i cebCap1.NW_016107444v1 I 1 I 578 s proCoq1.NW_012133858v1 7412420 14 + 22200726 TGTGTGTG--TG--TGTG i proCoq1.NW_012133858v1 C 0 I 131 s otoGar3.GL873829 408221 12 - 608964 --TGTGTG--TG--TGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425469 14 - 98207768 TGTGTGTG--TG--TGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29062838 14 + 31377067 TGTGTGTG--TT--TGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887024 14 + 6579706 TGCGTACG--TC--TGAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25896342 187 - 114275543 I e aotNan1.NW_018503669v1 62652 429 - 69927 I a score=204191.000000 s hg38.chr3_KI270779v1_alt 117399 34 + 205312 tg----tgCACGCGCG---------CGTGCACAGGCTAGTG---TCCTTC s panTro5.chr3 200100986 34 + 202621043 tg----tgCACGCGCA---------CGTGCACAGGCTAGTG---TCCTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82521 34 + 190779 tg----tgCACGCGCA---------CGTGCACAGGCTAGTG---TCCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45533 38 + 106623 tgtgtatgCACGCGCG---------CGTGCACAGGCTAGTG---TCCTTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854640 34 + 123690457 TA----CGCACGCACG---------CGTGCACAGGCTAGTG---TCCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453751 34 + 204787373 tg----tgCGCGCACG---------CGTGCACAGGCCAGTG---TCCTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61580 34 + 192460366 tg----tgCGCGCACG---------CGTGCACAGGCCAGTG---TCCTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 536986 34 + 19675229 tg----tgCGCGCACG---------CGTGCACAGGCCAGTG---TCCTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476591 34 + 16847902 tg----tgCGCGCACG---------CGTGCACAGGCCAGTG---TCCTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410067 34 - 91754291 tg----tgCACGCACG---------CGTGCACAGGCCAGTG---TCCTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567489 34 - 1977891 CG----CGCGCGCACG---------CGTGCACAGGCCAGTG---TCCTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446821 34 + 7796314 tg----tgCGCGCACG---------CGTGCACAGGCCAGTG---TCCTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926696 34 - 74750902 ca----tgtgtgcgtg---------cgtgCACAGGCCAGTG---TCCTGT i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 454840 36 + 17725628 ca----tgcgtgtgtg---------tg-GCACAGGCCAGTGTCCTCCTGT i saiBol1.JH378146 C 0 I 3 s otoGar3.GL873829 408233 25 - 608964 TG----TGCGCGCGCG---------CG---------CAGTG---TCTTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425483 42 - 98207768 TA----TGCACACACAGTCTGCATTCATATATAAGC-AATA---TCCTCC i mm10.chr16 C 0 I 1 s canFam3.chr33 29062852 13 + 31377067 ---------------------------------GATCGGTA---TCCTT- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887038 8 + 6579706 TG----TGCGCG-------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412434 131 + 22200726 I e micMur3.chr1 25896342 187 - 114275543 I e aotNan1.NW_018503669v1 62652 429 - 69927 I e cebCap1.NW_016107444v1 417919 578 - 6778120 I a score=983751.000000 s hg38.chr3_KI270779v1_alt 117433 106 + 205312 TGTGGGTGTGTCTGCGTGAGGACCCATCCAT--GCATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGCGCCTATGGA-TAAGGTATAGTCTTGTCTTGATTCCCAG s panTro5.chr3 200101020 106 + 202621043 TGTGGGTGTGTCTGCGTGAGGACCCATCCAT--GTATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGCGCCTATGGA-TAAGGTATAGTCTTGTCTTGATTCCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82555 106 + 190779 TGTGGGTGTGTCTGCGTGAGGACCCATCCAT--GTATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGCGCCTATGGA-TAAGGTATAGTCTTGTCTTGATTCCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45571 106 + 106623 TGTGGGTGTGTCTGCGTGAGGACCCATCCAT--GCATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGCGCCTATGGA-TAAGGTATAGTCTTGTCTTGATTCCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854674 96 + 123690457 TGTGGGTGTGTCTGCGTGAGGACCCATCCAT--GCATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGTGCCTGTGG-----------GTCTTGTCTTGATTCCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453785 101 + 204787373 TGTGGGGGTGTCTGCGTGAGGACCCCTCCAT--GC----TTG-TCATTATGGCCTCCCCCTG--TGCACCTGAGCCTATGGA-TAAGGTATAGTCTTGTCTTGAGTCCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61614 101 + 192460366 TGTGGGGGTGTCTGCGTGAGGACCCCTCCAC--GC----TTG-TCATTATGGCCTCCCCCTG--TGCACCTGAGCCTATGGA-TAAGGCATAGTCTTGTCTTGAGTCCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537020 101 + 19675229 TGTGGGGGTGTCTGCGTGAGGACCCCTCCAC--GC----TTG-TCATTATGGCCTCCCCCTG--TGCATCTGAGCCTATGGA-TAAGGCATAGTCTTGTCTTGAGTCCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476625 105 + 16847902 TGTGGGGGCGTCTGCGTGAGGACCCCTCCAC--GCTTGTTTG-TCTTTATGGCCTCCCCCTG--TGCACCTGAGCCTATGGA-TAAGGTATAGTCTTGTCTTGAGTCCCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410101 101 - 91754291 TGTGGGGGTGTCTGCGTGAGGACCCCTCCAC--GC----TTG-TCATTATGGCCTCCCCCTG--TGCACCTGAACCTATGGA-TAAGGTATAGTCTTGTCTTGAGTCCCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567523 105 - 1977891 TGTGGGGGCGTCTGCGTGAGGACCCCTCCAC--GCTTGTTTG-TCTTTAAGGCCTCCCCCTG--TGCACCTGAGCCTATGGA-TAAGGTATAGTCTTGTCTTGAGTCCCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446855 106 + 7796314 TGTGGGGGTGTCTGCGTGAGGACCCATCCAC--GCTTGTTTG-TCTTTATGGCCTCCGCCTA--TGCACCTGCGCCGATGGATTAAGGTCTAGTCTTGTCTTCATTCCCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926733 105 - 74750902 TGTGGGTGTGTCTGTGTGAGGACCCATCCAT--GC-CACTGGATCCTTATGGCCTCCCCATG--TGTCCCTGCGCCTACCCA-CAAGGCGTAGTCTTGTCTTGATTCCCGG i calJac3.chr17 I 3 C 0 s saiBol1.JH378146 454879 105 + 17725628 TGTGGGTGTGTCTGTGTGAGGACCCAT-CAT--GCACGTTTGGTCCTTATGGCCTCCCCATG--TGCCCCTGCGCCTACCCA-CAAGGCATAGTCTTGTCTTGAGGCCCAG i saiBol1.JH378146 I 3 C 0 s cebCap1.NW_016107444v1 418497 105 - 6778120 TGTGGGTGTGTCCGTGTGAGGACCCATCCAT--GCACGTTTGGTCCTTATGGCC-CCCCGTG--TGCCCCTGCGCCTACCCA-CAAGGCACAGTCTTGTCTTGAGGCCCAG i cebCap1.NW_016107444v1 I 578 C 0 s aotNan1.NW_018503669v1 63081 106 - 69927 TGTGGGTGTGTCTGTGTGAGGACCCATCCAT--GCACGTTTGGTCCTTATGGCCTCCTCATG--TGCCCCTGCGCCTACCCC-CAAGGCATAGTCTTGTCTTGATTCCCAG i aotNan1.NW_018503669v1 I 429 C 0 s otoGar3.GL873829 408258 105 - 608964 ---CTGCGTGGCTGTGTGAAGACCCATCCGTTAGTGTATTTGTTCTCCATGGCCTCTTCCTG--TGCGCCTATGCCTACTGA-CATGGAGTAGTCTTATCTTTATTCCCAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425526 97 - 98207768 TCCTGATATATCTGTGTAGGAACCCATCCATCTGTATATTTGGCCACCATGGCCTTTTCCTG--TACCCCCA-GTCTACTAA-ACAGGTAGAGTCTGGTTT---------- i mm10.chr16 I 1 C 0 s canFam3.chr33 29062865 95 + 31377067 -GTGGGTACATCTGTGAGAGAATTCATCCGG--G---------TCTTTATGGCTCCTTCCTGTCTGTCTCTGTATTGACTGA-GAAGGTGTGGTCTTGTCTTTATTAT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887046 52 + 6579706 --------------TGTGTGAACCCATGCCT--G-------------TGTGGCCTCTTCCTC--TGCACCTCTGTCTAGCCT-T--------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412434 131 + 22200726 I e micMur3.chr1 25896342 187 - 114275543 I a score=199518.000000 s hg38.chr3_KI270779v1_alt 117539 14 + 205312 TATTCATTCTCCTT s panTro5.chr3 200101126 14 + 202621043 TATTCATTCTCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82661 14 + 190779 TATTCATTCTCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45677 14 + 106623 TATTCATTCTCCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854770 14 + 123690457 TATTCATTCTCCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202453886 14 + 204787373 TATTCACTCCCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61715 14 + 192460366 TATTCACTCCCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537121 14 + 19675229 TATTCACTCCCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476730 14 + 16847902 TATTCACTCCCCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410202 14 - 91754291 TATTCACTCCCCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567628 14 - 1977891 TATTCACTCCCCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446961 14 + 7796314 TATTCACTCCCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926838 14 - 74750902 TATTCATTCTCCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454984 14 + 17725628 TATTCATTCTCCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418602 14 - 6778120 TATTCATTCTCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63187 14 - 69927 TATTCATTCTCCTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896529 14 - 114275543 TATTCATTCTCTTT i micMur3.chr1 I 187 C 0 s otoGar3.GL873829 408363 14 - 608964 TATTCATTCTCCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425623 10 - 98207768 -ATTCACTCTT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29062960 13 + 31377067 TATGTATTTCCTT- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887098 14 + 6579706 TATTCATGCTCCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412434 131 + 22200726 I a score=509007.000000 s hg38.chr3_KI270779v1_alt 117553 42 + 205312 GAAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC s panTro5.chr3 200101140 42 + 202621043 GAAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82675 42 + 190779 GAAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45691 42 + 106623 GAAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202453900 42 + 204787373 GTAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61729 42 + 192460366 GTAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537135 42 + 19675229 GTAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476744 42 + 16847902 GTAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410216 42 - 91754291 GTAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567642 42 - 1977891 GTAGAATC-CTGA-CAGCCTTCAGTCACCTC---CCCTTTTCCAGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 446975 42 + 7796314 GTAGAATC-CTGA-CAGCCTTCAGTCACCTT---CCCTTTTCCAGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926852 42 - 74750902 GAAGAATC-CCAG-TAGTCTTCAGTCACCTT---CCCTTTTCCAGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 454998 42 + 17725628 GAAGAATC-CCAG-TAGTCTTCAGTCACCTT---CCCTTTTCCAGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418616 42 - 6778120 GAAGAATC-CCAG-CAGTCTTCAGTCACCTT---CCCTTTTCCAGTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63201 42 - 69927 GAAGAATC-CCAG-GAGTCTTCAGTCACCTT---CCCTTTTCCAGTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896543 40 - 114275543 GAAGAATC-CCGA-TCATCTTCAGTCACCTT---CCCCTTCC--GCC i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 408377 40 - 608964 GAAGAATC-CGGG-TCATTATCAGTCACCTT---CCCCTTTC--GTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425633 43 - 98207768 GAAGAGTCTCAAA-TCATCTTCATGCCGCAG---GCCCTTTCCAGTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29062973 40 + 31377067 GAAGAATC-CTGAGTCACCTTTAAGCACATT------TTTCTGAGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887112 46 + 6579706 GAAGAATC-CTGAATTGTCTTCAATCATCTTCTTCCCTTTTCCAGTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412434 131 + 22200726 I e nomLeu3.chr11 120854784 0 + 123690457 C a score=1056816.000000 s hg38.chr3_KI270779v1_alt 117595 78 + 205312 TCCCAAAAGCAATGGCGCC----T-TAAATGTGC-GG-TAAGGATGAGGTGAGTCTTGAGGTAGCCTAGGCCACAGCTGCCCCTT s panTro5.chr3 200101182 78 + 202621043 TCCCAAAAGCAATGGCGCC----T-TAAATGTGC-GG-TAAGGATGAGGTGAGTCTTGAGGTAGCCTAGGCCACGGCTGCCCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82717 78 + 190779 TCCCAAAAGCAATGGCGCC----T-TAAATGTGC-GG-TAAGGATGAGGTGAGTCTTGAGGTAGCCTAGGCCACGGCTGCCCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45733 78 + 106623 TCCCAAAAGCAATGGCGCC----T-TAAATGTGC-AG-TAAGGATGAGGTGAGTCTTGAGGTAGCCTAGGCCACAGCTGCCCCTT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202453942 78 + 204787373 TCCCAAAAGCAATGGCGCC----T-TAAGTGTGC-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGACCACAGCTGTCCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61771 78 + 192460366 TCCCAAAAGCAATGGCGCC----T-TAAGTGTGC-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGACCACAGCTGTCCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537177 78 + 19675229 TCCCAAAAGCAATGGCGCC----T-TAAGTGTGC-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGACCACAGCTGTCCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476786 78 + 16847902 TCCCAAAAGCAATGGCGCC----T-TAAGTGTGC-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGGCCACAGCTGTCCCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410258 78 - 91754291 TCCCAAAAGCAATGGCGCC----T-TAAGTGTGC-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGGCCACAGCTGTCCCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567684 78 - 1977891 TCCCAAAAGCAATGGCGCC----T-TAAGTGTGC-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGGCCACAGCTGTCCCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447017 78 + 7796314 TCCTAAAAGCAATGGCACC----T-TAAGTGTGT-GG-TGAGGATGGGGTGGGTCTTGAGGTAGCCTAGGCCACAGCTGCCCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926894 77 - 74750902 TCCCAAAAGCAATGGCATC----T-TAGGTGTGT-GG-TGAGGACGGGGTGGGTCTTAAGGTATCCTA-GTCACAGCTGCCCCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455040 78 + 17725628 TCCCAAAAGCAATGGCGTC----T-TAGGTGTGT-GG-TGAGGATGGGGTGGGTCTTGAGGTACCCTAGGCCACAGCTGCCCCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418658 76 - 6778120 T--CAAAAGCAATGGCATC----T-TAGGTGTGT-GG-TGAGGACGGGGTGGGTCTTGAGGTATCCTAGGCCACAGCTGCCCCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63243 78 - 69927 TCCCAAAAGCAATGGCGTC----T-TAGGTGTGT-GG-TGAGGATGGGGAGGGTCTTGAGGTATCCTGGGCCACAGCTGCCCCTT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896583 78 - 114275543 TCCGCAAAGCAATGGCTCC----T-GAAGTGTGC-GG-CGAGGATGGGGTGGGCCCTGAGGTATCCTAGGCCACAGCTGTCCCTT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7412565 78 + 22200726 TCCCCAAAGCAATGGCTCC----T-GAGGTGTGC-GG-TGAGGATGGGCTGGGTCCTGAGGTATCCTAGGCCACAGCTGTCCCTT i proCoq1.NW_012133858v1 I 131 I 52 s otoGar3.GL873829 408417 77 - 608964 TCCCCAAAGCAACAGC-CC----T-TAAGTGTGC-AG-TGATGCTGGGACGAGTTCTGAGGTATCCTAGGTCACAGGCGTCCCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425676 59 - 98207768 -CCACAGAGCAGGGGCAGA----C-TGA-----------------GGGATGGGTCCCGAGGT--CCTAGGT-GCAGCTGCCCATC i mm10.chr16 C 0 C 0 s canFam3.chr33 29063013 83 + 31377067 TCCTCAAAGGATCGGTGCCACCTG-CAAGTGTGTGGG-TGAGGCTGGGGTGGGTCCTGAGGTATCCTAGGTCACAGCTGCCCCTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887158 79 + 6579706 TCCCCGAAGCA-TGGCGCC----TGGAAGTCCGT-GGCTGGGTTTGAGGTGGGCTCTGAGGTGTCCTGAGCCACAGCGGCCCGGT i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120854784 0 + 123690457 C a score=243357.000000 s hg38.chr3_KI270779v1_alt 117673 18 + 205312 CAAGGC--AAGGCCT--CAGCT s panTro5.chr3 200101260 18 + 202621043 CAAGGC--AAGGCCT--CAGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82795 18 + 190779 CAAGGC--AAGGCCT--CAGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45811 18 + 106623 CAAGGC--AAGGCCT--CAGCT i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202454020 18 + 204787373 CAAGGC--GAGGCCT--CAGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61849 18 + 192460366 CAAGGC--GAGGCCT--CAGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537255 18 + 19675229 CAAGGC--GAGGCCT--CAGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476864 18 + 16847902 CAAGGC--GAGGCCT--CAGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410336 18 - 91754291 CAAGGC--GAGGCCT--CAGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567762 18 - 1977891 CAAGGC--GAGGCCT--CAGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447095 18 + 7796314 CAAGGC--GAGGCCT--CAGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926971 18 - 74750902 CAAGGT--GAGGCCT--CAGCT i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 455118 18 + 17725628 CAAGGC--GAGGCCT--CAGCT i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 418734 18 - 6778120 CAAGGT--GATGCCT--CAGCT i cebCap1.NW_016107444v1 C 0 I 4 s aotNan1.NW_018503669v1 63321 18 - 69927 CAAGGC--GAGGCCT--CAGCT i aotNan1.NW_018503669v1 C 0 I 4 s micMur3.chr1 25896661 17 - 114275543 -TGGGC--GAGGCCT--CAGCT i micMur3.chr1 C 0 I 23 s otoGar3.GL873829 408494 18 - 608964 TGGGGC--GAGGCCT--CAGCT i otoGar3.GL873829 C 0 I 4 s mm10.chr16 65425735 20 - 98207768 TGGGAC--AGGGCCTTACAATT i mm10.chr16 C 0 I 2 s canFam3.chr33 29063096 18 + 31377067 TGGGGC--CAGGCCT--CAGCC i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3887237 17 + 6579706 ---GGCCTGAGCCCT--CAGCT i dasNov3.JH569502 C 0 I 4 e proCoq1.NW_012133858v1 7412643 52 + 22200726 I e nomLeu3.chr11 120854784 0 + 123690457 C a score=166291.000000 s hg38.chr3_KI270779v1_alt 117691 16 + 205312 GAGTTCAGGAAATAGG s panTro5.chr3 200101278 16 + 202621043 GAGTTCAGGAAATAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82813 16 + 190779 GAGTTCAGGAAATAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45829 16 + 106623 AAGTTCAGGAAATAGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202454038 16 + 204787373 GAGTGCAGGAGATAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61867 16 + 192460366 GAGTGCAGGAGATAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537273 16 + 19675229 GAGTGCAGGAGATAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476882 16 + 16847902 GAGTGCAGGGGATAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410354 16 - 91754291 GAGCGCAGGAGATAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567780 16 - 1977891 GAGTGCAGGGGATAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447113 16 + 7796314 GAGTGCAGGAGATACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 926993 16 - 74750902 GAGTCCAGAGGGTAGG i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 455140 16 + 17725628 GTGTCCAGAGGATAGG i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 418756 16 - 6778120 GTGTCCAGAGGATAGG i cebCap1.NW_016107444v1 I 4 C 0 s aotNan1.NW_018503669v1 63343 16 - 69927 GAGTCCAGAGGATATG i aotNan1.NW_018503669v1 I 4 C 0 s otoGar3.GL873829 408516 16 - 608964 GAGTCCAGACGGTAGT i otoGar3.GL873829 I 4 C 0 s mm10.chr16 65425757 16 - 98207768 GAGTCCAAAGGGTAGG i mm10.chr16 I 2 C 0 s canFam3.chr33 29063118 16 + 31377067 GAGTCCAGGCGGTGGG i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 3887258 16 + 6579706 GAGTCCAGGGCGTAGG i dasNov3.JH569502 I 4 C 0 e proCoq1.NW_012133858v1 7412643 52 + 22200726 I e micMur3.chr1 25896678 23 - 114275543 I e nomLeu3.chr11 120854784 0 + 123690457 C a score=139218.000000 s hg38.chr3_KI270779v1_alt 117707 12 + 205312 AGAACCTGGCCC s panTro5.chr3 200101294 12 + 202621043 AGAACCTGGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82829 12 + 190779 AGAACCTGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45845 12 + 106623 AGAACCTGGCCC i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202454054 12 + 204787373 AGAAGCTGGTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61883 12 + 192460366 AGAAGCTGGTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537289 12 + 19675229 AGAAGCTGGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476898 12 + 16847902 AGAAGCTGGTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410370 12 - 91754291 AGAAGCTGGTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567796 12 - 1977891 AGAAGCTGGTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447129 12 + 7796314 AGAATCTGGTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927009 12 - 74750902 AGAATCTGGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455156 12 + 17725628 AGAATCTGGTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418772 12 - 6778120 AGAATCTGGTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63359 12 - 69927 AGAATCTGGTCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896701 12 - 114275543 AGTACTTGGTCC i micMur3.chr1 I 23 C 0 s otoGar3.GL873829 408532 12 - 608964 CATACTTGGTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425773 12 - 98207768 AGAACTTGTTCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29063134 12 + 31377067 AGTAGTGGTTCC i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3887274 12 + 6579706 AGTACCCGGTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412643 52 + 22200726 I e nomLeu3.chr11 120854784 0 + 123690457 C a score=2596716.000000 s hg38.chr3_KI270779v1_alt 117719 162 + 205312 CGGAGCAACCCCAGAAGCG---------CAGGACCACGAACGTCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGCCCCAAAGAAGATGCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG s panTro5.chr3 200101306 162 + 202621043 CGGAGCAACCCCAGAAGCG---------CAGGACCACGAACGTCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGCCCCAAAGAAGATGCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCAGGCCATGTAGATGGAGAAGGACACACAGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 82841 162 + 190779 CGGAGCAACCCCAGAAGCG---------CAGGACCACGAACGTCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGCCCCAAAGAAGATGCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCAGGCCATGTAGATGGAGAAGGACACACAGCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 45857 162 + 106623 CGGAGCAACCCCAGAAGCG---------AAGGACCACGAACGTCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGCCCCAAAGAAGATGCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCAGGCCGTGTAGATGGAGGACGACACACAGCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202454066 162 + 204787373 TGGAGCAATTCCAGAAGCG---------CAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61895 162 + 192460366 TGGAGCAATTCCAGAAGCG---------CAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537301 162 + 19675229 TGGAGCAATTCCAGAAGCG---------CAGGACCACGAGCACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 476910 162 + 16847902 TGGAGCAATTCCAGAAGCG---------CAGGACCACGAACACCCCGACCCCAAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATAGAGAAGGACACACAGCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410382 162 - 91754291 TGGAGCAATTCCAGAAGCG---------CAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCAAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567808 162 - 1977891 TGGAGCAATGCCAGAAACG---------CAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447141 162 + 7796314 TGGAGCAATCCCAGAAGCG---------CAGGACCACGAACATCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCGAAGAAGATCCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGCGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927021 162 - 74750902 TGGAGCAACCCCAGAAGTG---------CAGGACCACAAACATCCCGAACCCCAGCAGCAAGAGGGCACTGAGGGCCCCAAAGAAGATCCCGAAGAACGCTTTGAGTTTCATGCTCAGGTGCTCACAGCGCTCACCCCAGGCTGTGTAGATGGAGAAGGACACGCAGCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455168 162 + 17725628 TGGAGCAGCCCCAGAAATG---------CAGGACCACACACATCCCGATCCCCAGCAGCAAGAGGGCCCCGAGGGCCCCGAAGAAGATCCCGAAGAACGCTTCGAGTTTCATGCTGAGGTGCTCACAGCGCTCACCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418784 162 - 6778120 TGGAGCAACCCCAGAAGCG---------CAGGACCACAAACGTCCCGAACCCCAGCAGCAAGAGGGCACCGAGGGCCCCAAAGAAGATCCCGAAGAACGCTTCGAGTTTCATGCTCAGGTGCTCACAGCGCTCACCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63371 162 - 69927 TGGAGCAACCCCAGAAGTG---------CAGGACCATAAACGTCCCGAACCCCAGCAGCAAGACGGCACCGAGGGCCCCGAAGAAGATCCCGAAGAACGCTTCGAGTTTCACGCTCAGGTGCTCACAGCGCTCACCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25896713 162 - 114275543 CGGAGCAGCCCCAGAAGCG---------CAGGACCACAAAGACCGCGACCCCGAGCACCAAGAGGACGCTCAGGGCCCCAAAGAGGATCCCGAAGAACGCGCCGAGTTTCACACTCAGGTGCTCACAGCGCTCGCCCCAGGCGGTGTAGATGGTGAAGGACACACAGCTGG i micMur3.chr1 C 0 I 784 s proCoq1.NW_012133858v1 7412695 162 + 22200726 CGGAGCAGCCCCAGAAGCG---------CAGGACCACAAACACCGCGGCCCCCAGCAGCAAGAGGACGCTCAGGGCGCCAAAGAGGATCCCGAAGAACGCGCCGAGTTTCACACTCAGGTGCTCACAGCGCTCGCCCCAGGCCGTGTAGATGGTGAAGGACACACAGCTGG i proCoq1.NW_012133858v1 I 52 I 113 s otoGar3.GL873829 408544 162 - 608964 CGGAGCAGCCCCAGAAGCG---------CAGGCACACAAAAACCACGACCCCCAGCAGGAAGAGGGCGCTCAGGGCCCCAAAGAGGATCCCGAAGAACGCGCCGAGTTTCACGCTCAGATGCTGACAGCGCTCGCCCCAGGCGGTGTAGATGGAGAAAGACACGCAGCTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425785 162 - 98207768 TGGAGCAGCCGCAGAAGTG---------AAAGATCATAAATGCTAAGATCCCCAGTAGCAAGAGGGCGCCCAGGGTTCCGAAGAGGATCCCGTAGAATGCCCCAAGTTTCACACTTAGGTGCTCACAGTGTTCGCCCGAGGATGAGTAGATGGTGAAGGATGCGCAGCTGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29063149 171 + 31377067 GGGAGTAGCGCCAGAAGCGCCAGAAGTACAGGACTGCAAACCCCACAGCCCCCAGCAGCAGGAGGATGAACAGGGCTCCAAAGAGGATTCCAAAGAAGGCACTGAGCTTCATGCCCAGATGCTCACAGCGCTCGCCCCAGGGCGTGTAGATGGAGAAAGGCACACAGCTGT i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3887286 162 + 6579706 GGGAGGAGCGGAGGAAGCG---------CAGCACCACGAAGGCCCCGGCCCCGAGCACCAGGAGGGCGCCCAGGGTCCCAAAGAAGATCCCGAAGAAGGCTCTGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCACGGTGTGTAGATGGAGAAGGGCACACAGCTGG i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120854784 0 + 123690457 C a score=155003.000000 s hg38.chr3_KI270779v1_alt 117881 27 + 205312 TGACCAAGAG---------AGACAGACAGGCG-GTCA s panTro5.chr3 200101468 27 + 202621043 TGACCAAGAG---------AGACAGACAGGTG-GTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83003 27 + 190779 TGACCAAGAG---------AGACAGACAGGTG-GTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46019 27 + 106623 TGACCAAGAG---------AGACAGACAGGTG-GTCA i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202454228 25 + 204787373 GGACCGAGAG---------AG--AGACAGCGT-GTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 62057 25 + 192460366 GGACCGAGAG---------AG--AGACAGCGT-GTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537463 25 + 19675229 GGACCGAGAG---------AG--AGACAGCGT-GTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477072 25 + 16847902 CGACCGAGAG---------AG--AGACAGTGT-GTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410544 25 - 91754291 GGACCGAGAG---------AG--AGACAGCGT-GTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567970 25 - 1977891 CGACCGAGAG---------AG--AGACAGTGT-GTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447303 25 + 7796314 GGCCCGCGAG---------AG--AGACAGCGT-GTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927183 26 - 74750902 GGACCGAGAG---------AG--AGACAGCGTGGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455330 26 + 17725628 GGACGGAGAG---------AG--AGACAGTGTGGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418946 26 - 6778120 GGACCGAGAG---------AG--AGACAGCGTGGTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63533 26 - 69927 GGACCGAGAG---------AG--AGGCAGCGTGGTCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 408706 28 - 608964 GGACAGAGGGACCACGATTAG--AGGCGGG------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425947 25 - 98207768 AGACAGAGAG---------A---ATGCATTGTGGTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29063320 24 + 31377067 GGACAGAGGGA--------AG--GGACAAG---GTCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887448 24 + 6579706 GGACACAGAG---------CG--GGG-AGGGG-GTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7412857 113 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e nomLeu3.chr11 120854784 0 + 123690457 C a score=199573.000000 s hg38.chr3_KI270779v1_alt 117908 21 + 205312 ------GAGGCGGGAGCTCA----------------------GCCTCCC s panTro5.chr3 200101495 21 + 202621043 ------GAGGCGGGAGCTCA----------------------GCCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83030 21 + 190779 ------GAGGCGGGAGCTCA----------------------GCCTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46046 21 + 106623 ------GAGGCGGGAGCTCA----------------------GCCTCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854784 21 + 123690457 ------GAGGCGGGAGCTCA----------------------GCCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202454253 21 + 204787373 ------GAGGCGGGAGCTCA----------------------GCCTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 62082 21 + 192460366 ------GAGGCGGGAGCTCA----------------------GCCTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537488 21 + 19675229 ------GAGGCGGGAGCTCA----------------------GCCTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477097 21 + 16847902 ------GAGGTGGGAGCTCA----------------------GCCTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410569 43 - 91754291 ------GAGGCGGGAGCTCAGCCTCCCAGCCCCACCTCTTCCGCCTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 567995 21 - 1977891 ------GAGGCGGGAGCTCA----------------------GCCTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447328 21 + 7796314 ------GAGGCGGGAGCTCA----------------------GCCTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927209 21 - 74750902 ------GAGGTGGGTGCTCA----------------------GCCTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455356 19 + 17725628 ------CGG--CGGTGTTCA----------------------GCCTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418972 21 - 6778120 ------GAGGTGGGTGCTCA----------------------GCCTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63559 21 - 69927 ------GAGGCGGCTGCTCA----------------------GCCTCCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 408734 21 - 608964 ------GAGGCGGGTGCTCA----------------------GCCTGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425972 15 - 98207768 ------------GTGACGAT----------------------TCCTTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29063344 16 + 31377067 ---------GCAGTGGGGAG----------------------GCCCC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887472 27 + 6579706 GCAGCGCGGAGGGGCGCTCA----------------------GCCTCCC i dasNov3.JH569502 C 0 I 5 e proCoq1.NW_012133858v1 7412857 113 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I a score=68825.000000 s hg38.chr3_KI270779v1_alt 117929 8 + 205312 AGCCCCTC s panTro5.chr3 200101516 8 + 202621043 AGCCCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83051 8 + 190779 AGCCCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46067 8 + 106623 AGCCCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854805 8 + 123690457 AGCCCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202454274 8 + 204787373 AGCCCCGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 62103 8 + 192460366 AGCCCCGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537509 8 + 19675229 AGCCCCGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477118 8 + 16847902 AGCCCCGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410612 8 - 91754291 AGCCCCGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568016 8 - 1977891 AGCCCCGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447349 8 + 7796314 AGCCCCGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927230 8 - 74750902 AGCCTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455375 8 + 17725628 AGCCTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 418993 8 - 6778120 AGCCTCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63580 8 - 69927 AGTCTCTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 408755 8 - 608964 CACCCCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425987 1 - 98207768 A------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7412857 113 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e dasNov3.JH569502 3887499 5 + 6579706 I e canFam3.chr33 29063360 0 + 31377067 C a score=523910.000000 s hg38.chr3_KI270779v1_alt 117937 58 + 205312 CTCTTCTGCTGGGG--AAGAAGAGGTTCTGTAGGAGAGGCTGGGCTCGCCCCACTCTCCG s panTro5.chr3 200101524 58 + 202621043 CTCTTCTGCTGGGG--AAGAAGAGGTTCTGTAGGAGAGGCTGGGCTTGCCCCACTCTCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83059 58 + 190779 CTCTTCTGCTGGGG--AAGAAGAGGTTCTGTAGGAGAGGCTGGGCTCGCCCCACTCTCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46075 58 + 106623 CTCTTCTGCTGGGG--AAGAAGAGGTTCTGTAGGAGAGGCTGGGCTCGCCCCACTCTCCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854813 58 + 123690457 CTCTTCTGCTGGGG--AAGAAGAGGTTCTGTAGGAGAGGCTGGGCTCGCCCCACTCTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202454282 55 + 204787373 CTCTTCCGCTGGG-----GAAGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCACTCTCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 62111 55 + 192460366 CTCTTCCGCTGGG-----GAAGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCACTCTCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537517 55 + 19675229 CTCTTCCGCTGGG-----GAAGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCGCTCTCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477126 55 + 16847902 CTCTTCCGCTGGG-----GAAGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCACTCTCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410620 55 - 91754291 CTCTTCCGCTGGG-----GAAGAGGTTCTCTGGGAGGGGCTGGGCTTGCCCCGCTCTCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568024 55 - 1977891 CTCTTCCGCTGGG-----GAAGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCACTCTCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447357 58 + 7796314 CTCTTCTCCTGGGG--AAGAAGATGTTCTCTAGGAGACGCTGGGCTTGCCCCACTCTCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927238 58 - 74750902 TTCTCCTGCTGGGG--CAGAGGAGGTTCTCTAGGAGAGGCTGGGCTCGCCCCACTCTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455383 58 + 17725628 TTCTTCTGCTGGGG--CAGAGGAGGTTCTCCAGGAGAGGCTGAGCTCGCCCCACTCTCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419001 58 - 6778120 TTCTTCTGCTGGGG--CAGAGGAGGTTCTCTAGGAGAGGCTGGGCTCGCCCCACTCTCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63588 55 - 69927 TT---CTGCTGGGG--CAGAGGAGGTTCTCTAGGAGAGGCTGGGCTCGCCCCACTCTCTA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 408763 58 - 608964 CTCTTCTGCCGAGG-CCAGAGGAGGTTCTACAGGACAGGCTGGGCACACGCAGTAGACA- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65425988 50 - 98207768 -----CTCCTGGG---GACCAGGGGTTATGCAAGACAGGCAGGGCT--ATCAGCTGGGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29063360 33 + 31377067 -------------------AGGAGGTTTCCCTCCACAGGCTGGG--------ACTCTCCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3887504 56 + 6579706 CTCTCCTCGTGGGGCCAGTGAGACGCTCCC---GTCAGGCTGGGCTC-CCCCGCTAACTA i dasNov3.JH569502 I 5 C 0 e proCoq1.NW_012133858v1 7412857 113 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I a score=87064.000000 s hg38.chr3_KI270779v1_alt 117995 6 + 205312 GAGAGA s panTro5.chr3 200101582 6 + 202621043 GAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83117 6 + 190779 GAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46133 6 + 106623 GAGAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854871 6 + 123690457 GAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202454337 6 + 204787373 GAGAGA i rheMac8.chr2 C 0 I 1498 s macFas5.chr2 62166 6 + 192460366 GAGAGA i macFas5.chr2 C 0 I 4 s macNem1.NW_012014355v1 537572 6 + 19675229 GAGAGA i macNem1.NW_012014355v1 C 0 I 4 s cerAty1.NW_012004056v1 477181 6 + 16847902 GAGAGA i cerAty1.NW_012004056v1 C 0 I 4 s chlSab2.chr15 410675 6 - 91754291 GAGAGA i chlSab2.chr15 C 0 I 4 s manLeu1.NW_012102020v1 568079 6 - 1977891 GAGAGA i manLeu1.NW_012102020v1 C 0 I 4 s colAng1.NW_012118932v1 447415 6 + 7796314 GAGAGA i colAng1.NW_012118932v1 C 0 I 4 s calJac3.chr17 927296 6 - 74750902 GAGAGA i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 455441 4 + 17725628 --GAGA i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 419059 6 - 6778120 GAGAGA i cebCap1.NW_016107444v1 C 0 I 4 s aotNan1.NW_018503669v1 63643 6 - 69927 GAGAGA i aotNan1.NW_018503669v1 C 0 I 4 s proCoq1.NW_012133858v1 7412970 6 + 22200726 GAGAGG i proCoq1.NW_012133858v1 I 113 C 0 s otoGar3.GL873829 408821 4 - 608964 --GAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65426038 6 - 98207768 GAGGGT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3887560 6 + 6579706 GGGAGA i dasNov3.JH569502 C 0 I 4 e micMur3.chr1 25896875 784 - 114275543 I e canFam3.chr33 29063393 0 + 31377067 C a score=708953.000000 s hg38.chr3_KI270779v1_alt 118001 60 + 205312 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGTGTGGG s panTro5.chr3 200101588 60 + 202621043 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGCGTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83123 60 + 190779 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGCGTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46139 60 + 106623 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCGGGTGTGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854877 60 + 123690457 CTGAGTCAGCCCTGAGGCTGCGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGTGTGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62176 59 + 192460366 CTGAGTCAGCCCTGAGGCCGTTCTGAAGTGAGGCCACTGGGCCAA-GAGGCAGCTGTGGG i macFas5.chr2 I 4 C 0 s macNem1.NW_012014355v1 537582 59 + 19675229 CTGAGTCAGCCCTGAGGCCGTTCTGAAGTGAGGCCACTGGGCCAA-GAGGCAGCTGTGGG i macNem1.NW_012014355v1 I 4 C 0 s cerAty1.NW_012004056v1 477191 59 + 16847902 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGGCCACTGGGCAAA-GAGGCAGCTGTGGG i cerAty1.NW_012004056v1 I 4 C 0 s chlSab2.chr15 410685 60 - 91754291 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGGCCACTGAGCAAAGGAGGCAGCTGTGGG i chlSab2.chr15 I 4 C 0 s manLeu1.NW_012102020v1 568089 59 - 1977891 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGGCCGCTGGGCAAA-GAGGCAGCTGTGGG i manLeu1.NW_012102020v1 I 4 C 0 s colAng1.NW_012118932v1 447425 60 + 7796314 CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGTTGTGGG i colAng1.NW_012118932v1 I 4 C 0 s calJac3.chr17 927306 58 - 74750902 CTGAGTCAGCCCTGAGGTCATGCTGAA--GAGACCATTGGGCAAAGGAGGCAGGTGTGGG i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 455449 58 + 17725628 CTGAGTCAGCCCTGACGTCATGCTGAA--GAGACCACTGGGCAAAGGAGGCAGGTGTAGG i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 419069 58 - 6778120 CTGAGTCAGCCCTGAGGTCATGCCGAA--GAGACCACTGGGCAAAGGAGGCAGGTGTGGG i cebCap1.NW_016107444v1 I 4 C 0 s aotNan1.NW_018503669v1 63653 57 - 69927 CTGAGTCAG-CCTGAGGTCATGCTGAA--GAGGCTGCTGGGCAAAGGAGGCAGGTGTGGG i aotNan1.NW_018503669v1 I 4 C 0 s proCoq1.NW_012133858v1 7412976 60 + 22200726 CCGAGTCAGCCCAGAGGCCGTGCTGAGGCGAGGCCACCGGGCAAAGGAGGCAGGCGTGGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 408825 59 - 608964 -CGGGTCAGGGCTGAGGCCGTGCGGAGGCGAGGCCACCGGGCAAAGGAGGCAGGTGGGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65426044 59 - 98207768 -CCAGCCAGCTCTAAGGCCATTTTGAATTGAGGTCACCAATCAAAGGAGGGAGGCATAAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29063393 54 + 31377067 CTGGGGAAG----GAGGCAGAACCGAA--GTGCCTACTGGGTAGGGGAGACTGGCAGGGG i canFam3.chr33 C 0 I 403 s dasNov3.JH569502 3887570 60 + 6579706 CCGCGTCAGCCCTGAAGCCGCGCTGAGGCAAGGCCACTAAGCAAAGGCTGCAGGCGGGGG i dasNov3.JH569502 I 4 C 0 e micMur3.chr1 25896875 784 - 114275543 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=12637.000000 s hg38.chr3_KI270779v1_alt 118061 1 + 205312 C s panTro5.chr3 200101648 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83183 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46199 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854937 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62235 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537641 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477250 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410745 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568148 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447485 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927364 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455507 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419127 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63710 1 - 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7413036 1 + 22200726 C i proCoq1.NW_012133858v1 C 0 I 624 s otoGar3.GL873829 408884 1 - 608964 T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65426103 1 - 98207768 C i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3887630 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25896875 784 - 114275543 I e canFam3.chr33 29063447 403 + 31377067 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=151015.000000 s hg38.chr3_KI270779v1_alt 118062 20 + 205312 -TTTAAAAACATGGGCCTGgg s panTro5.chr3 200101649 20 + 202621043 -TTTAAAAACATGGGCCTGgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83184 20 + 190779 -TTTAAAAACATGGGCCTGgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46200 20 + 106623 -TTTAAAAACATGGGCCTGgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854938 20 + 123690457 -TTTAGAAACCTGGGCCTGgg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62236 19 + 192460366 -TTT-AAAACATGGGCCTGgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537642 19 + 19675229 -TTT-AAAACATGGGCCTGgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477251 19 + 16847902 -TTT-AAAACATGGGCCTGgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410746 19 - 91754291 -TTT-AAAACATGGGCCTGgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568149 19 - 1977891 -TTT-AAAACATGGGCCTGgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447486 20 + 7796314 -TTTAAAAACAAGGGCCTGgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927365 19 - 74750902 -TTT-AAAATGTGGGTCTAgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455508 19 + 17725628 -TTT-AAAACATGGGCCTAgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419128 19 - 6778120 -TTT-AAAACGTGGGCCTAgg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 63711 19 - 69927 -TTT-AAAACATGGGTCTAgg i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 408885 9 - 608964 -TTC-----------CCTGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65426104 18 - 98207768 --TT-AAAAACCATGTCTGGG i mm10.chr16 C 0 I 363 s dasNov3.JH569502 3887631 20 + 6579706 CTTG-GAAACGCACGTCTGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e canFam3.chr33 29063447 403 + 31377067 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=16117.000000 s hg38.chr3_KI270779v1_alt 118082 2 + 205312 cc s panTro5.chr3 200101669 2 + 202621043 cc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83204 2 + 190779 cc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46220 2 + 106623 cc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854958 2 + 123690457 cc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62255 2 + 192460366 cc i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 537661 2 + 19675229 cc i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 477270 2 + 16847902 cc i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 410765 2 - 91754291 cc i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 568168 2 - 1977891 cc i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 447506 2 + 7796314 cc i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 927384 2 - 74750902 ct i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 455527 2 + 17725628 cc i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 419147 2 - 6778120 cc i cebCap1.NW_016107444v1 C 0 I 16 s aotNan1.NW_018503669v1 63730 2 - 69927 cc i aotNan1.NW_018503669v1 C 0 I 15 s otoGar3.GL873829 408894 2 - 608964 GT i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 3887651 2 + 6579706 TT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=45939.000000 s hg38.chr3_KI270779v1_alt 118084 11 + 205312 ggcgcgggggc s panTro5.chr3 200101671 11 + 202621043 ggcgcgggggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83206 11 + 190779 ggcgcgggggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46222 11 + 106623 ggcgcgcgggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854960 11 + 123690457 ggcgcgggggg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62258 11 + 192460366 ggcctggtggc i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 537664 11 + 19675229 ggcctggtggc i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 477273 11 + 16847902 ggcctggtggc i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 410768 11 - 91754291 ggcctggtggc i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 568171 11 - 1977891 ggcctggtggc i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 447509 11 + 7796314 ggcctggtggc i colAng1.NW_012118932v1 I 1 C 0 s saiBol1.JH378146 455530 11 + 17725628 ggcatggtggt i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 408897 3 - 608964 --------CGC i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3887653 11 + 6579706 CACCTGGGAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=213367.000000 s hg38.chr3_KI270779v1_alt 118095 41 + 205312 tcacgcctgtaatcccagcacattgagaggctgaggcgggc s panTro5.chr3 200101682 41 + 202621043 tcacgcctgtaatcccagcacattgagaggctgaggcgggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83217 41 + 190779 tcacgcctgtaatcccagcacattgagaggctgaggcgggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46233 41 + 106623 tcaagcctgtaatcccagcacattgagaggctgaggcgggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120854971 41 + 123690457 ctcagcctgtaatcccagcacattgagaggctgaggtgggt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62269 41 + 192460366 tcacgcctggaatcccagcactctgaaaggctgaggcgggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537675 41 + 19675229 tcacgcctggaatcccagcactctgaaaggctgaggcgggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477284 40 + 16847902 tcacgcctggaatcccagcactctgaaaggctgaggc-ggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410779 41 - 91754291 tcacgcctggaatcccagcactttgagaggctgaggcgggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568182 41 - 1977891 tcacgcctggaatcccagcactctgaaaggctgaggcgggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447520 41 + 7796314 tcacgcctggaattccagcactttgaggggctgaggcgggc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 455541 41 + 17725628 tcccgcctgtaatcccagcacgttgggaggccaaggcgggt i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 408900 30 - 608964 TC-CGCCTGGA----CAGCA------GGGACAGAGACTGGC i otoGar3.GL873829 C 0 I 111 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887664 0 + 6579706 C e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=401994.000000 s hg38.chr3_KI270779v1_alt 118136 76 + 205312 gcatcacttgaggtcaggggttcgagaccagactg-gccaacacggtgaaa-ccccatctctactaaaaatac-aaaat s panTro5.chr3 200101723 76 + 202621043 ggatcacttgaggtcaggggttcgagaccagactg-gccaacatggtgaaa-ccccatctctactaaaaatac-aaaat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83258 76 + 190779 ggatcacttgaggtcaggggtttgagaccagactg-gccaacatggtgaaa-ccccatctctactaaaaatac-aaaat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46274 76 + 106623 ggatcacttgaggtcaggggttcgagaccagactg-gccaacatggtgaaa-ccccatctctactaaaaatac-aaaat i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855012 77 + 123690457 ggattacttgaggtcaggggttcgagaccagactg-gccaacatggtgaaacccccatctctactaaaaatac-aaaat i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62310 77 + 192460366 ggatcacttgagatcaggagttcaagaccagactg-gccaacacggtaaaa-ccccatctctactaaaaatacaaaaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537716 77 + 19675229 ggatcacttgagatcaggagttcaagaccagactg-gccaacacggtaaaa-ccccatctctactaaaaatacaaaaat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477324 77 + 16847902 ggatcacttgaggtcaggagttcaagaccagactg-gccaacacggtaaaa-ccccatctctactaaaaatacaaaaat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410820 77 - 91754291 ggatcacttgaggtcaggagttcaagaccagactg-gccaacacggtaaag-ccccatctctactaaaaatacaaaaat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568223 77 - 1977891 agatcacttgaggtcaggagttcaagaccagactg-gccaacacggtaaaa-ccccatctctactaaaaatacaaaaat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447561 77 + 7796314 ggatcacttgaggtcaggagttcaagatcagactg-gccaacacggtaaaa-ccccatctcgactaaaaatacaaaaat i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 455582 78 + 17725628 ggatcacctgaggttgggagttcaagaccagcctgaaccaccatggtgaaatccccatctctactaaaaatacaaaaa- i saiBol1.JH378146 C 0 I 1 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 408930 111 - 608964 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887664 0 + 6579706 C e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=261466.000000 s hg38.chr3_KI270779v1_alt 118212 54 + 205312 tagccaggcgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggc s panTro5.chr3 200101799 54 + 202621043 tagccaggcgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83334 54 + 190779 tagccaggcgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46350 54 + 106623 tagccaggcgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855089 54 + 123690457 tagccaggcatggtggtgcgcacctgtagtcccagctactcaggaggctgaggc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62387 54 + 192460366 tagccaggcgtggtggcgcgcacctgtagtcccagctactcgggaggctgaggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537793 54 + 19675229 tagccaggcgtggtggcgcgcacctgtagtccctgctactcgggaggctgaggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477401 54 + 16847902 taaccaggcatggtggcgcgcacctgtagtcccagctactcgggaggctgaggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410897 54 - 91754291 gagccaggcgtggtggcgcacacctgtagtgccagctactcgggaggctgaggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568300 54 - 1977891 tagccaggcgtggtggcgcgcacctgtagtcccagctactcgggaggctgagac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 447638 54 + 7796314 tagccaggcgtggtggcgcgcacctgtagtcccagctacttgggagactgaggc i colAng1.NW_012118932v1 C 0 M 875 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 408930 111 - 608964 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887664 0 + 6579706 C e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e rheMac8.chr2 202454343 1498 + 204787373 I a score=273684.000000 s hg38.chr3_KI270779v1_alt 118266 67 + 205312 agaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcaacactgcactccagcctg s panTro5.chr3 200101853 67 + 202621043 agaatcgcttgaacctgggaggtggaggttgcagtgagcccagattgcaacactgcactccagcctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83388 67 + 190779 agaatcgcttgaacctgggaggtggaggttgcagtgagcccagattgcaacactgcactccagcctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46404 67 + 106623 agaatcgctcgaacctgggaggtggaggttgcagtgagccgagattgcaacactgcactccagcctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855143 67 + 123690457 agaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcaacactgcactccagcctg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62441 67 + 192460366 agaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537847 67 + 19675229 agaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477455 67 + 16847902 agaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 410951 67 - 91754291 agaatcgcttgaacctgggaggtggagcttgcagtgagccgagattgcaacactgcactccagcctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568354 67 - 1977891 agaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctg i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 408930 111 - 608964 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887664 0 + 6579706 C e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=20690.000000 s hg38.chr3_KI270779v1_alt 118333 4 + 205312 gggg s panTro5.chr3 200101920 4 + 202621043 gggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 83455 4 + 190779 ggGG i panPan2.chrUn_NW_014024201v1 C 0 T 3335 s gorGor5.CYUI01000576v1 46471 4 + 106623 gggg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855210 4 + 123690457 gggg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62508 4 + 192460366 gggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537914 4 + 19675229 gggg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477522 4 + 16847902 gggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411018 4 - 91754291 gggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568421 4 - 1977891 gggg i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409041 4 - 608964 GAGG i otoGar3.GL873829 I 111 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887664 0 + 6579706 C e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=140457.000000 s hg38.chr3_KI270779v1_alt 118337 67 + 205312 acagagcaagactccgtctcaaaaaac-------aaaaaca-----aaaaCCTGGTGTGAATTCAGCTGCACGTGCAGT s panTro5.chr3 200101924 67 + 202621043 acagagcaagactccgtctcaaaaaac-------aaaaaca-----aaaaCCTGGTGTGAATTCAGCTGCACGTGCAGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 46475 56 + 106623 acagagcaagactccgtctcaaaaaac-------aaaaacaaaaacaaaaCCTGGTGTGAAT----------------T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855214 74 + 123690457 acagagcaagactccgtctcaaaaaacaaaacaaaaaaaca-----aaaaCCTGGTGTGAATTCAGCTGCATGTGCAGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 62512 64 + 192460366 acaga--gagaccccgtctc-aaaaac-------aaaaaca-----aaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537918 64 + 19675229 acaga--gagaccccgtctc-aaaaac-------aaaaaca-----aaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477526 66 + 16847902 acagagcgagaccccgtctc-aaaaac-------aaaaaca-----aaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411022 66 - 91754291 acagagcgagactccatctc-aaaaac-------aaaaaca-----aaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568425 66 - 1977891 acagagcgagaccccgtctc-aaaaac-------aaaaaca-----aaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGT i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409045 19 - 608964 -----------------------------------ACAGCG-----CCAACG------------GGCTGCA-------- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887664 0 + 6579706 C e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e panPan2.chrUn_NW_014024201v1 83459 3335 + 190779 T e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=35935.000000 s hg38.chr3_KI270779v1_alt 118404 12 + 205312 CAGCTGCACCTG s panTro5.chr3 200101991 12 + 202621043 CAGCTGCACCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 46531 12 + 106623 CAGCCGTACCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855288 12 + 123690457 CAGCTGCACCTG i nomLeu3.chr11 C 0 M 186 s macFas5.chr2 62576 12 + 192460366 CAGCTGTGCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 537982 12 + 19675229 CAGCTGTGCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477592 12 + 16847902 CAGCTGTGCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411088 12 - 91754291 CAGCTGCGCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568491 12 - 1977891 CAGCTGCGCCTG i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409064 4 - 608964 CAGC-------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3887664 12 + 6579706 CAGGCGCGCAGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e panPan2.chrUn_NW_014024201v1 83459 3335 + 190779 T e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=137477.000000 s hg38.chr3_KI270779v1_alt 118416 50 + 205312 GGCGGCAGGGATGCC----GGCCAC--AGGTGGGCATGCGCAGTCAC-ACccc----cgcc s panTro5.chr3 200102003 50 + 202621043 GGCAGCAGGGATGCC----GGCCAC--AGGTGGGCACGCGCAGTCAC-ACccc----cgcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 46543 50 + 106623 GGCAGCAGGGATGCC----GGCCAC--AGGTGGGCATGCGCAGTCAC-ACccc----cgcc i gorGor5.CYUI01000576v1 C 0 C 0 s macFas5.chr2 62588 54 + 192460366 GGCAGCAGGGATGCCGACTGGCCAC--AAGTGGGCATGCGCAGTCAC-AGCCC----CGCC i macFas5.chr2 C 0 M 425 s macNem1.NW_012014355v1 537994 53 + 19675229 GGCAGCAGGGATGCCGACTGGCCAC--AAGTGGGCATGCGCAGTCGC-Agccc----cgc- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477604 54 + 16847902 GGCAGCAGGGATGCCGACTGGCCAC--AAGTGGGCATGCGCAGTCAC-Agccc----cgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411100 54 - 91754291 GGCAGCAGGGATGCCGACTGGCCAC--AAGTGGGCATGCGCAGTCAC-Agccc----cgcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568503 54 - 1977891 GGCAGCAGGGATGCCGACTGGCCAC--AAGTGGGCATGCGCAGTCAC-Agcgc----cgcc i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409068 48 - 608964 ------AGGGACAGAGACTGGCCAC--GGATGGGCATGCGCAGTCGCAAATCC----CAC- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3887676 54 + 6579706 -GCCCGACGGGCGC-----GGCTGCTAAGCAGAGCATGCGCAGTCCC-Agcccgccgcgcc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e panPan2.chrUn_NW_014024201v1 83459 3335 + 190779 T e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e rheMac8.chr2 202454343 1498 + 204787373 I e nomLeu3.chr11 120855300 186 + 123690457 M a score=44352.000000 s hg38.chr3_KI270779v1_alt 118466 43 + 205312 ccagcccggccccgccccgccccg----------------cccACCC---GGAG--------------------------AGCC--GGgc s panTro5.chr3 200102053 49 + 202621043 ccagcccggccccgccccgccccgcccc----------gccccgccc---GGAG--------------------------AGCT--GGgc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 46593 43 + 106623 cc------gccccgccccgccccgcccc----------gccccgccc---GGAG--------------------------AGCT--GGgc i gorGor5.CYUI01000576v1 C 0 C 0 s macNem1.NW_012014355v1 538047 35 + 19675229 --------------cccggccccgcccc----------tccccgccc---ggag--------------------------agct--gggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477658 34 + 16847902 ---------------ccggcccggcccc----------gccccgccc---ggag--------------------------agct--gggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411154 29 - 91754291 --------------------ccggcccc----------gccccgccc---ggag--------------------------agct--gggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568557 29 - 1977891 --------------------ccggcccc----------gccccgccc---ggag--------------------------agct--gggc i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409116 73 - 608964 ---------------CCGGCCCCGCCCCCAGAGAGATGGTCCCGCCCCCTGGATTGANNNNNNNNNNNNNNNNNNNNCACGGAT--GGGC i otoGar3.GL873829 C 0 I 26 s dasNov3.JH569502 3887730 41 + 6579706 ----------cccgcccgcgcccgcccg----------cccccgccc---gggg--------------------------AGCTCCGGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e panPan2.chrUn_NW_014024201v1 83459 3335 + 190779 T e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I e nomLeu3.chr11 120855300 186 + 123690457 M a score=359691.000000 s hg38.chr3_KI270779v1_alt 118509 177 + 205312 cccgccccacccgc-----gctccgcccgccccCTCCTTCGGCGGGATCTGGAACTGCAGCTGGCGGAGGGCCCGGAGCCCAGGTCTGCGTGGGGCCGCGGCTTCCTGCGCTGTTAACCAGCGGAGCCCCGGGGACTGCTGA---TGAGGG----CAGGGG----CA--AAGGCGCCTCGCTT----GACTGAGGGGCA s panTro5.chr3 200102102 172 + 202621043 cccgccccacccgc-----gctccgcccgccccCTCCTTCGGCGGGATCTGGAACTGCAGCTGGCCGAGGGCCCGGAGACCACGCCTGCGTGGGGCCGCGGCTTCCTGTG-----AACCAGCGGAGCCCCGGGGACTGCTGG---TGAGGG----CAGGGG----CA--AAGGCGCCTCGCTT----GACTGAGGGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80124 172 + 190779 CCCGCCCCACCCGC-----GCTCCGCCCGCCCCCTCCTTCGGCGGGATCTGGAACTGCAGCTGGCGGAGGGCCCGGAGACCACGCCTGCGTGGGGCCGCGGCTTCCTGTG-----AACCAGCGGAGCCCCGGGGACTGCTGG---TGAGGG----CAGGGG----CA--AAGGCGCCTCGCTT----GACTGAGGGGCA i panPan2.chrUn_NW_014024201v1 T 3335 C 0 s gorGor5.CYUI01000576v1 46636 177 + 106623 cccgccccacccgc-----gctccgcccgccccCTCCTTCGGCGGGATCTGGAACTGCAGCTGGCGGAGGGCTCGGAGACCAGGCCTGCGTGGGGCCGCGGCTTCCTGCGCTGTTAACCAGCGGAGCCCCGGGGACTGCTGG---TGAGGG----CAGGGG----CA--AAGGCGCCTCGCTT----GACTGAGGGGCA i gorGor5.CYUI01000576v1 C 0 C 0 s macNem1.NW_012014355v1 538082 169 + 19675229 -----cccgccccc-----gctccgcccacccccTTCTTCGGC-GGATCTGGAACTGCAGCTGGCGGAGGGCGCGGAGACCAGGCCTGCGT-GCGCCGCGGCTTCCTGCGCTGTTCACCAGCGGAACCCC-GGGACTGCTGG---TGAGGG----CAGGGG----CA--AAGGCGCCTCCCGT----GACTGAGGGGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477692 169 + 16847902 -----cccgccccc-----gctccgcccacccccTTCTTCAGC-GGATCTGGAACCGCAGCAGGCGGAGGGCGCGGAGACCAGGCCTGCGT-GCACCGCGGCTTCCTGCGCTGTTCACCAGCGGAACCCC-GGGACTGCTGG---TGAGGG----CAGGGG----CA--AAGGCGCCTCCCGT----GACTGAGGGGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411183 169 - 91754291 -----cccggcccc-----gccccgcccATCCCGTTCTTGGGCGGGATCTGGAACCGCAGCAGGCGGAGGGCGCGGAGACCAGGCCTGCGT-GCGCTGCGGCTTCCTGCGCTGTTCACCAGCGGGA-CGC-GGGACTGCCGG---TGAGGG----CAGGGG----CA--AAGGCGCCGCCCGT----GACTGAGGGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568586 169 - 1977891 -----cccgccccc-----gctccgcccacccccTTCTTCGGC-GGATCTGGAACCGCAGCAGGCGGAGGGCGCGGAGACCAGGGCTGCGT-GCACCGCGGCTTCCTGCGCTGTTCACCAGCGGAACCCC-GGGACTGCTGG---TGAGGG----CAGGGG----CA--AAGGCGCCTCCCGT----GACTGAGGGGCA i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409215 158 - 608964 -----CCCGCCCCCAGAGAGATGGTCCCGCCCCCTGGATTGACCGGATCCGGAGCTGCAGCCGGGCGAAGGCTGGCAGA-------------GGACAGCGCC-------------AACGGGCTGCACTCC-CGAACCCCTCAGCCTGAAGGGGCCCAGAGG----CCATAAGGCGCCTCGCCTCCCCGACTGAG----- i otoGar3.GL873829 I 26 C 0 s dasNov3.JH569502 3887771 129 + 6579706 -----CTGGCCTGC----AGCTTCTGGCCGCCGCTGCTCTGCCTGGCT---------------GCGGGGCGTGCGGGGGCAGAGTCTG----GGGCTGAGG------------------AGCGGGCGATCTGGGACTGC-AG---TGGGGG----CGGGGTGGTCCG--AGGGCGGCTGCACC----CA---------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I e nomLeu3.chr11 120855300 186 + 123690457 M a score=239929.000000 s hg38.chr3_KI270779v1_alt 118686 88 + 205312 GGACTGG-CCTAGACACAGGACTG--CAGGTTCTTTTCCCAcaaggagacagcagggaagcagcagccagatcaggtgggagggtttgact s panTro5.chr3 200102274 90 + 202621043 GGACTGG-CCTAGACACAGGACTGCACAGGTTCTTTTCCCACAAGAAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80296 90 + 190779 GGACTGG-CCTAGACACAGGACTGCACAGGTTCTTTTCCCACAAGAAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46813 88 + 106623 GGACTGG-CCTAGACACAGGACTG--CAGGTTCTTTTCCCACAAGGAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855488 88 + 123690457 GGGCTGG-CCTAGACACAGGACTG--CAGGTTCTTTTCCCACAAGGAGGCAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACT i nomLeu3.chr11 M 186 C 0 s macNem1.NW_012014355v1 538251 89 + 19675229 GGGCTGGCCCTAGACACAGGACTG--CAGGTTCCTTCCCCACAAGGAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477861 89 + 16847902 GGGCTGGCCCTAGACACAGGACTG--CAGGTTCCTTCCCCACAAGGAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTCACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411352 89 - 91754291 GGGCTGGCCCTAGACACAGGACTG--CAGGTTCCTTCCCCAcaaggagacagcagggaagcagcagccagatcaggtgggagggtttgact i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568755 89 - 1977891 GGGCTGGCCCTAGACACAGGACTG--TAGGTTCCTTCCCCACAAGGAGACGGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACT i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 409373 24 - 608964 ------------------------------TGCTCTTAACATAGG--------------------------------GGCAGGGCT----- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3887900 45 + 6579706 GCCCTGG-CCTGGGCAGGGCGTCA--CTGGTGT----------AAGAGACGGCCCGGG--------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e saiBol1.JH378146 455660 1 + 17725628 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=5389.000000 s hg38.chr3_KI270779v1_alt 118774 9 + 205312 ttgggccct s panTro5.chr3 200102364 9 + 202621043 TTGGGCccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80386 9 + 190779 TTGGGCccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46901 9 + 106623 TTGGGCcct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855576 9 + 123690457 CTGGGCcct i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 538340 6 + 19675229 TTGGGC--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477950 6 + 16847902 TTGGGC--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411441 6 - 91754291 ttgggc--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568844 6 - 1977891 TTGGGC--- i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 455661 8 + 17725628 taAggcca- i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 409397 6 - 608964 ---GGCCCT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3887945 1 + 6579706 T-------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e calJac3.chr17 927386 1 - 74750902 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=18215.000000 s hg38.chr3_KI270779v1_alt 118783 8 + 205312 ggcgcggt s panTro5.chr3 200102373 8 + 202621043 ggcgcggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80395 8 + 190779 ggcgcggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46910 8 + 106623 ggcgcggt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855585 8 + 123690457 ggcgcggt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 927387 8 - 74750902 ggcatggt i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 455669 8 + 17725628 ggcgtggt i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3887946 8 + 6579706 GGCGCGGG i dasNov3.JH569502 C 0 I 212 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 409403 0 - 608964 C e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e macNem1.NW_012014355v1 538346 0 + 19675229 C e colAng1.NW_012118932v1 447692 875 + 7796314 M e manLeu1.NW_012102020v1 568850 0 - 1977891 C e chlSab2.chr15 411447 0 - 91754291 C e cerAty1.NW_012004056v1 477956 0 + 16847902 C e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=19061.000000 s hg38.chr3_KI270779v1_alt 118791 6 + 205312 ggctca s panTro5.chr3 200102381 6 + 202621043 ggctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80403 6 + 190779 ggctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46918 6 + 106623 ggctca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855593 6 + 123690457 ggctca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 538346 4 + 19675229 --ctcg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477956 4 + 16847902 --ctca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411447 4 - 91754291 --ctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568850 4 - 1977891 --ctca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 927395 6 - 74750902 ggttcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455677 6 + 17725628 ggctca i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 409403 0 - 608964 C e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887954 212 + 6579706 I e canFam3.chr33 29063447 403 + 31377067 I e aotNan1.NW_018503669v1 63732 15 - 69927 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=4246.000000 s hg38.chr3_KI270779v1_alt 118797 1 + 205312 c s panTro5.chr3 200102387 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80409 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46924 1 + 106623 c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855599 1 + 123690457 c i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 538350 1 + 19675229 c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 477960 1 + 16847902 c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411451 1 - 91754291 c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 568854 1 - 1977891 c i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 927401 1 - 74750902 c i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455683 1 + 17725628 a i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 63747 1 - 69927 c i aotNan1.NW_018503669v1 I 15 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 409403 0 - 608964 C e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887954 212 + 6579706 I e canFam3.chr33 29063447 403 + 31377067 I e cebCap1.NW_016107444v1 419149 16 - 6778120 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=1352786.000000 s hg38.chr3_KI270779v1_alt 118798 245 + 205312 gcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccgtctctact----------------------------aaaaatgcaaaaatcagctgggcgtggtggtgcatgcctgtagtcccaactactcgggaggctgaggcaggagaatcgcttgaacgcgggagaaggacgttgcagtgagccgagaacgcaccactgcactccagcctgggcgaca s panTro5.chr3 200102388 245 + 202621043 gcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccgtctctact----------------------------aaaaatgcaaaaatcagctgggcgtggtggtgcgtgcctgtagtcccaactactcgggaggctgaggcaggagaatcgcttgaacgcgggagaaggacgttgcagtgagccgagaacgcaccactgcactccagcctgggcgaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80410 245 + 190779 gcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccgtctctact----------------------------aaaaatgcaaaaatcagctgggcgtggtggtgcgtgcctgtagtcccaactactcgggaggctgaggcaggagaatcgcttgaacgcgggagaaggacgttgcagtgagccgagaacgcaccactgcactccagcctgggcgaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 46925 245 + 106623 gcctgtaatctcagcactttgggagaccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccgtctctact----------------------------aaaaatgcaaaaatcagcagggcgtggtggtgcgtgcctgtaatcgcaactactcgggaggctgaggcaggagaatcgcttgaacgcgggagaaggacgttgcagtgagccgagaacgcaccactgcactccagcctgggcgaca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855600 245 + 123690457 gcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccatctctact----------------------------aaaaatgcaaaaatcagctgggcgtggtggtgcatgcctgtagtcccaactacttgggaggctgaggcaagagaatcgcttgaactcgggagaaggacgtggcagtgagccgagaacgcaccactgcactccagcctgggcgaca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 538351 245 + 19675229 gcctgtaatcccagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctact----------------------------aaaaatacaaaaatcagctgggtgtggtggtgcgcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggaggttgcagtgagtcgagatcacgccactgcactccagcctgggcgacg i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 477961 244 + 16847902 gcctgtaatgtcagcactttgggaggctgaggtgggcggatcacctgaggtcaggggtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctact----------------------------aaaaatacaaaaatcagctgggtgtggtggcgggcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggaggttgcagtgag-cgagaatgcaccactgcactccagcccgggcgacg i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 411452 243 - 91754291 gcctgaaatctcagcactttggaaggctgaggtgggcggatcacctgaggtca-gagtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctact----------------------------aaaaatacaaaaatcagctgggtgtggtggtgcgcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggaggttgcagtgag-cgagaacgcaccattgcactccagcctgggcgacg i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 568855 244 - 1977891 gcctgtaatgtcagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctact----------------------------aaaaatacaaaaatcaactgggtgtggtggtgcgcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcggaggttgcagtgag-cgagaatgcaccactgcactccagcccgggcgacg i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 927402 247 - 74750902 acctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggttgggagttcaagaccagcctgaaccaatatggtgaaacccccatctctact----------------------------aaaaatacaaaagttagccaggtgtggtggcgtgcacctatcatctcagctactggggaggtggaggcagaagaatcgcttgaacccgggaggcagaggttgctgtgagctgagaatgcaccactgcactccagcctgggtaacc i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 455684 267 + 17725628 gcctgtaatcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcaagaccatcctg-gtcaacatggtgaaa-ccccgtttctactaaaaacaaaaaaacaaaaaacaaaaaacaaaaatacaaaaatt----aggcgtggtggcacgcacctgtaatcccagctactggggaggtggaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagctgagaacacaccactgcactccagcctgggtgaca i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 419165 247 - 6778120 gcctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggttgggagttcaagaccagcctgaaccaacatggtgaaacccccgtctctact----------------------------aaaaatacaaatactagtcaggcgtggtggcgcgcacctgtaatcccagctcctggggaggtggaggcaggagaattgcttgaacccaggaggcagaggttgcagtgagctgagaacacaacactgcactccagcctgggtggca i cebCap1.NW_016107444v1 I 16 I 1 s aotNan1.NW_018503669v1 63748 246 - 69927 gcctgtaatcccagcactttgggaggccaaggcggctagatcacctgaggtcaggagttcaagaccagcctgaaccaacatggtgaaa-ccccatctctact----------------------------aaaaatacaaaaattagccaggcatggtggcatgcacctgtaatcccagctactggggaggctgagggaggagaatcacttgcacccgggaggcagaggttgcagtgagctgagaacgcaccactgcactccagcctgggtgaca i aotNan1.NW_018503669v1 C 0 I 1 s otoGar3.GL873829 409403 42 - 608964 -----------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCGCCCACAG--------------------GAGACagcagaagca----aaattgggggaaaga------------------------------------------------ i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887954 212 + 6579706 I e canFam3.chr33 29063447 403 + 31377067 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e macFas5.chr2 62642 425 + 192460366 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=100832.000000 s hg38.chr3_KI270779v1_alt 119043 24 + 205312 aatgacactccatctcaaa----acata s panTro5.chr3 200102633 24 + 202621043 aatgacactccatctcaaa----acata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80655 24 + 190779 aatgacactccatctcaaa----acata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47170 24 + 106623 aatgacactccatctcaaa----acata i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855845 24 + 123690457 aatgacactccatctcaaa----acata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 63072 21 + 192460366 AATGACACTCCATCTCAAA----AA--- i macFas5.chr2 M 425 C 0 s macNem1.NW_012014355v1 538597 21 + 19675229 aatgacactccatctcaaa----aa--- i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 478206 24 + 16847902 aatgacactccatctcaaa----aaata i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 411696 24 - 91754291 aatgacactccatctcaaa----aaata i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 569100 24 - 1977891 aatgacactccatctcaaa----aaata i manLeu1.NW_012102020v1 I 1 C 0 s calJac3.chr17 927650 20 - 74750902 agagatactcagtctcaaa---t----- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 455952 19 + 17725628 agagatactcagtctcaaa--------- i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 419413 23 - 6778120 agagatactcagtctcaaaaatt----- i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018503669v1 63995 19 - 69927 agagatactcagtctcaaa--------- i aotNan1.NW_018503669v1 I 1 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e otoGar3.GL873829 409445 0 - 608964 C e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887954 212 + 6579706 I e canFam3.chr33 29063447 403 + 31377067 I e colAng1.NW_012118932v1 447692 875 + 7796314 M e rheMac8.chr2 202454343 1498 + 204787373 I a score=67202.000000 s hg38.chr3_KI270779v1_alt 119067 15 + 205312 aaaatataaaaaatg s panTro5.chr3 200102657 15 + 202621043 aaaatataaaaaaTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80679 15 + 190779 aaaatataaaaaaTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47194 15 + 106623 aaaatataaaaaaTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855869 15 + 123690457 aaaatataaaaaaTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202455841 15 + 204787373 AAAAAATAAaaaatg i rheMac8.chr2 I 1498 C 0 s macFas5.chr2 63093 10 + 192460366 -----ATAAaaaatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538618 10 + 19675229 -----ataaaaaaTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478230 13 + 16847902 --aaaataaaaaaTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411720 14 - 91754291 -aaaaataaaaaatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569124 14 - 1977891 -aaaaataaaaaaTG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 927670 14 - 74750902 -aaaaaataaaaaaG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455971 14 + 17725628 -aaacaaaaaaaaaG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419436 14 - 6778120 -aaaaaataaaaaaG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64014 14 - 69927 -aaataaaaaataaG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 409445 1 - 608964 --------------g i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e dasNov3.JH569502 3887954 212 + 6579706 I e canFam3.chr33 29063447 403 + 31377067 I e colAng1.NW_012118932v1 447692 875 + 7796314 M a score=212652.000000 s hg38.chr3_KI270779v1_alt 119082 17 + 205312 tttggcttt-ggaaacca s panTro5.chr3 200102672 17 + 202621043 TTTGGCTtt-ggaaacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80694 17 + 190779 TTTGGCTtt-ggaaacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47209 17 + 106623 TTTGGCTtt-ggaaacca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855884 17 + 123690457 TTTGGCTtt-ggaaacca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202455856 17 + 204787373 tttggcttt-ggaaacca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63103 17 + 192460366 tttggcttt-ggaaacca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538628 17 + 19675229 TTTGGCTtt-ggaaacca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478243 17 + 16847902 TTTGGCTtt-ggaaacca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411734 17 - 91754291 tttggcttt-ggaaacca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569138 17 - 1977891 TTTGGCTtt-ggaaacca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 927684 17 - 74750902 TTTGGCTtt-ggaaacca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 455985 17 + 17725628 TTTGGCTTT-AGAAACCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419450 17 - 6778120 TTTGGCTtt-ggaaacca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64028 16 - 69927 TCTGGCTTT-GGAAG-CG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 409446 18 - 608964 tttggctttgggaaacca i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29063850 17 + 31377067 TTTGCCTTT-GGAACCCA i canFam3.chr33 I 403 C 0 s dasNov3.JH569502 3888166 17 + 6579706 tttggcttt-ggaagcca i dasNov3.JH569502 I 212 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e mm10.chr16 65426122 363 - 98207768 I e colAng1.NW_012118932v1 447692 875 + 7796314 M a score=268424.000000 s hg38.chr3_KI270779v1_alt 119099 30 + 205312 tgccctgctgcttaacctactgcgtcctgg- s panTro5.chr3 200102689 30 + 202621043 tgccctgctgcttaacctactgcgtcctgg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80711 30 + 190779 tgccctgctgcttaacctactgcgtcctgg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47226 30 + 106623 tgccctgctgcttaacctactgcgtcctgg- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855901 30 + 123690457 cgccctgctgcttaacctgctgcatcccag- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202455873 30 + 204787373 tgccctgctgcttaacctactggctccccg- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63120 30 + 192460366 tgccctgctgcttaacctactggctccccg- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538645 30 + 19675229 tgccctgctgcttaacctactggctccccg- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478260 30 + 16847902 tgccctgctgcttaacctactggctccccg- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411751 30 - 91754291 tgccctgctgcttaacctactggctccccg- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569155 30 - 1977891 tgccctgctgcttaacctactggctccccg- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 927701 29 - 74750902 taccctgct-tttaaccgactgggtgccgg- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456002 29 + 17725628 TACCCTGCT-CTTAACCTACTGGGCCCTCG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419467 29 - 6778120 taccctgct-cttaacctactgggtccccg- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64044 28 - 69927 TACCCTGCT-CTTAACCTACTGGGCCCCC-- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 409464 30 - 608964 aacgctgcaacttaacttgctggtaccttg- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65426485 30 - 98207768 TACCCTGGTATTTTACTTCCTGGGTGCCTA- i mm10.chr16 I 363 I 1 s canFam3.chr33 29063867 30 + 31377067 TGTTCTGTTATTTAACCTCCTGGCTACCTG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3888183 31 + 6579706 tgccctgctatttaacttcttgggtatcttg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e colAng1.NW_012118932v1 447692 875 + 7796314 M a score=597292.000000 s hg38.chr3_KI270779v1_alt 119129 56 + 205312 ggcaggttccttgtcatctctaagctgcagt-tttctcatcttcgaaatagttct-aa s panTro5.chr3 200102719 56 + 202621043 ggcaggttccttgtcatctctaagctgcagt-tttctcatcttcgaaatggTTCT-AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80741 56 + 190779 ggcaggttccttgtcatctctaagctgcagt-tttctcatcttcgaaatggTTCT-AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47256 56 + 106623 ggcaggttccttgtcatctctaagctgcagt-tttctcatcttcgaaatggTTCT-AA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855931 56 + 123690457 ggcagcttccttgtcatctctaagccgcagt-tttctcatcttcaaaatggctct-aa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202455903 56 + 204787373 ggcaagttcctggtcatctttaagctgcagt-tttctcatcttcgaaatggTTTC-AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63150 56 + 192460366 ggcaagttcctggtcatctttaagctgcagt-tttctcatcttcgaaatggTTTC-AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538675 56 + 19675229 ggcaagttcctggtcatctttaagctgcagt-tttctcatcttcgaaatggtttc-aa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478290 56 + 16847902 ggcaagttcctggtcatctttaagctgcagt-tttctcatcttcgaaatggtttc-aa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411781 56 - 91754291 ggcaagttccttgtcatctttaagctgcagt-tttctcatcttcgaaatggTTTC-AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569185 56 - 1977891 ggcaagttcctggtcatctttaagctgcagt-tttctcatcttcgaaatggtttc-aa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 448567 56 + 7796314 ggcaagttccttgtcatctttaagctgcagt-tttctcatcttcgaaatggtttc-aa i colAng1.NW_012118932v1 M 875 C 0 s calJac3.chr17 927730 54 - 74750902 ggcagtttcctt---atctctcagctgccat-tttctcatcttcgaaatggttctaaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456031 56 + 17725628 GGTAGTTTCCTTCCCAGCTCTCAGCTGCCAT-GTTCTCATCTTGGAAATGGTTCT-AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419496 56 - 6778120 ggcagtttccttctcatctctcagctgccat-tttctcatctttgaagtggttct-aa i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64072 56 - 69927 GGCAGCTTCCTTCTCATCTCCGAGCTGCCAT-TTTCTCATCTTCGAAGTGGTTCT-AA i aotNan1.NW_018503669v1 C 0 I 27 s otoGar3.GL873829 409494 56 - 608964 gacaagttccttgtcatcactaagctgcagt-tttctcaccttcaacacggtctt-aa i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65426516 52 - 98207768 TGGAGCCTCCTC----TCTCTTCAATGCAGTATTCCCCAAGTCTGGAATGGTTGA-A- i mm10.chr16 I 1 I 2 s canFam3.chr33 29063897 40 + 31377067 GGCAGATTCATTACC-----------------TACCTCTTCTTTAAAAGGGTCAT-AC i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3888214 56 + 6579706 gacagctgacttagcctctccaatctacagt-tttctcatctttaaaatggtcaa-aa i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I a score=271894.000000 s hg38.chr3_KI270779v1_alt 119185 52 + 205312 gcccc-cctatggctcttttgggtttcagagtt---tgtaatatagcgcctttatt s panTro5.chr3 200102775 52 + 202621043 GCCCC-CCTATGGCTCTTTTGGGTTTCAGAGTT---TGTAATATAGCGCCTTTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80797 52 + 190779 GCCCC-CCTATGGCTCTTTTGGGTTTCAGAGTT---TGTAATATAGCGCCTTTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47312 52 + 106623 TCCCC-CCTATGGCTCTTTTGGGTTTCAGAGTT---TGTAATATAGCGCCTTTATT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120855987 52 + 123690457 tGCCC-CTTGTGGCTCCTTTGGGTTTCAGAGTT---TGTAATATAGCGCCTTTATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202455959 43 + 204787373 TACCC-CCTGTGGCTCCTTTGGGTTTCAGAGTT---TGTAATA---------TATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63206 43 + 192460366 TACCC-CCTGTGGCTCCTTTGGGTTTCAGAGTT---TGTAATA---------TATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538731 43 + 19675229 taccc-cctgTGGCTCCTTTGGGTTTCAGAGTT---TGTAATA---------TATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478346 43 + 16847902 taccc-cctgTGGCTCCTTTGGGTTTCAGAGTT---TGTAATA---------TATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411837 43 - 91754291 TACCC-CCTGTGGCTCCTTTGGGTTTCAGAGTT---TGTAATA---------TATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569241 43 - 1977891 taccc-cctgTGGCTCCTTTGGGTTTCAGAGTT---TGTAATA---------TATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 448623 52 + 7796314 taccc-cctgTGGCTCCTTTGGGTTTCAGAGTT---TGTAATATAGCGCCTTTATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927784 50 - 74750902 tacccaactGTGGCTCCTTTGGGCCTCCGAG------GTAATATAGCGCCCTTATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456087 50 + 17725628 TGCCCCACTGTGGCTCCTTTGGGTCTCAGAG------GTGGTATAGTGCCTTTCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419552 49 - 6778120 taccc-gctgtggctcctcTGGGTCTCAGAG------GTAGTATAGCACCTTTCTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 409552 23 - 608964 cccac-cttgtggttcgttT--------------------------------TATT i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65426570 48 - 98207768 AACCT-TTTGTGACTAGCTTGACTTTCAGAA------GCAATG-CATGTCTTTCTC i mm10.chr16 I 2 C 0 s canFam3.chr33 29063939 49 + 31377067 CCTAC-CCAGAAGC-----TAAGTGTCAGTGTTAGAAGTCATGCAGCATCTTTAT- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3888271 43 + 6579706 aatac-cctgtgacttgttcaagggtcatggtC--ACATAGCATGG---------- i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I e aotNan1.NW_018503669v1 64128 27 - 69927 I a score=931050.000000 s hg38.chr3_KI270779v1_alt 119237 80 + 205312 ctccacacagagcaggcactcaCA-ACTCTCCTTTT--CCACTGTCCTCTCTTCCCTGGTCTCTGATCTCTC--------------GAGCCATCCTA s panTro5.chr3 200102827 80 + 202621043 CTCCACACAGAGCAGGCACTCACA-ACTCTCCTTTT--CCACTGTCCTCTCTTCCCTGGTCTCTGATCTCTC--------------GAGCCATCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80849 80 + 190779 CTCCACACAGAGCAGGCACTCACA-ACTCTCCTTTT--CCACTGTCCTCTCTTCCCTGGTCTCTGATCTCTC--------------GAGCCATCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47364 80 + 106623 CTCCACACAGAGCAGGCACTCACA-ACTCTCCTTTT--CCACTGTCCTCTCTTCCCTGGTCTCTGATCTCTC--------------GAGCCATCCTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856039 92 + 123690457 CTCCACACACAGCAGGCACTCACA-ACTCTcctttt--ccactgtcccctcttccctggtctctgatctctCTC--TTTACAAAGGGAGCCATCCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456002 92 + 204787373 CTCCACACAGAGCAGGCACTCACA-ACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63249 92 + 192460366 CTCCACACAGAGCAGGCACTCACA-ACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538774 92 + 19675229 CTCCACACAGAGCAGGCACTCACA-ACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478389 92 + 16847902 CTCCACACAGAGCAGGCACTCACA-ACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411880 92 - 91754291 CTCCACACAGAGCAGGCACTCACA-ACTCTCCCTTC--CCACTGTCCCCTCTTCCCTGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569284 92 - 1977891 CTCCACACAGGGCAGGCACTCACA-ACTCTCCTTTC--CCACTGTCCCTTCTTCCCTGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 448675 92 + 7796314 CTCCACACAGAGCAGGCACTCACA-ACTCTCCTTTC--CCACTGTCCCCTCTTCCCTGGTCTCCAATCTTTCTC--ATTACAAAGGGAGCCATCCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927834 96 - 74750902 CTCCACACAGAGCAGGCACTCACA-ACCCTCCTTTCTTCCACTGTCCCCTCTTCCCTGGTCTCTGGTTTCTCTCCAATCTCAAAGGGAGCCATCCTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456137 96 + 17725628 CTCCACACAAAGCAGGCACTCACA-ACCCTCCTTTCTTCCACTGTCCCCTCTTCCCTGGTCTCCGATTTCTCTCCGATCTCAAAGGGAGCCATCCTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419601 95 - 6778120 CTCCACACAAAGCAGGCACTCACA-ACCCGCCTTTTCTCCACTGT-CCCTCTTCCCTGGCCTCCGATTTCTCTCCGATCTCAAAGGGAGCCATCCTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64155 96 - 69927 CTCCACACAGAGCAGGCACTCACA-GCCCTCCTTTTTTCCACTGTCCCCTCTTCCCTGGTCTCCGAATTCTCTCCGATCTCAAAGGGAGCCATCGTA i aotNan1.NW_018503669v1 I 27 C 0 s otoGar3.GL873829 409575 79 - 608964 --CTCCACAAAGTAGGCACTCACA-CAGTTCCTTTT---CATTG----------CCTGGCCCCTGATCTCGCTA--ATTACAAGGGGAGCCACCCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65426618 85 - 98207768 CTCCATGCAGAGGAGTGCCACACA----CCCTTCTC--CTACTGCCCACT-TTCTCTGCTTTTCACCCTCCAGCCACT-----GGGGAGTCATCCCA i mm10.chr16 C 0 I 28 s canFam3.chr33 29063988 85 + 31377067 --CCACACAGAGTAAGTGCTCACA----CATCTTTT--CTATGGTCCCTTTTTCTCTGATCCCTGCTCTCTG----AGTCATCAGAGAACCATCCTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3888314 85 + 6579706 ---AACTCAGAGTAGGCATTCCCGCACCATCTTTCC--CTTTTGTCTGCTTTTCTCTGATCCCTGTTCGCAGTT-------ACAGAGACCCATCTTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e micMur3.chr1 25896875 784 - 114275543 I a score=6821.000000 s hg38.chr3_KI270779v1_alt 119317 1 + 205312 -A s panTro5.chr3 200102907 1 + 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80929 1 + 190779 -A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47444 1 + 106623 -A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856131 1 + 123690457 -A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456094 1 + 204787373 -A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63341 1 + 192460366 -A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538866 1 + 19675229 -A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478481 1 + 16847902 -A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411972 1 - 91754291 -A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569376 1 - 1977891 -A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 448767 1 + 7796314 -A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927930 1 - 74750902 -A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456233 1 + 17725628 -A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419696 1 - 6778120 -A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64251 1 - 69927 -A i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25897659 1 - 114275543 -A i micMur3.chr1 I 784 C 0 s otoGar3.GL873829 409654 1 - 608964 -A i otoGar3.GL873829 C 0 I 18 s canFam3.chr33 29064073 1 + 31377067 -A i canFam3.chr33 C 0 I 28 s dasNov3.JH569502 3888399 1 + 6579706 T- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7413037 624 + 22200726 I e mm10.chr16 65426703 28 - 98207768 I a score=4868732.000000 s hg38.chr3_KI270779v1_alt 119318 294 + 205312 --TTCC--------------------------TGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCCTCCACCTCCTGGCCACAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATCGCATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGAAAGCAACCGATGAACACTAAAT s panTro5.chr3 200102908 294 + 202621043 --TTCC--------------------------TGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCCTCCACCTCCTGGCCACAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATCGCATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGGAAGCAACCGATGAACACTAAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 80930 294 + 190779 --TTCC--------------------------TGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCCTCCACCTCCTGGCCACAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATCGCATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGGAAGCAACCGATGAACACTAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47445 294 + 106623 --TTCC--------------------------TGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCCTCCACCTCCTGGCCACAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATCGCATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGAAAGCAACTGATGAACACTAAAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856132 294 + 123690457 --TTCC--------------------------TGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCACTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGAAAGCAACTGATGAACACTAAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456095 294 + 204787373 --TTTC--------------------------TGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCTCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTATAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACATAGATTAACACAGAAAGCAACTGATGAACACTAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63342 294 + 192460366 --TTTC--------------------------TGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCTCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTATAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACATAGATTAACACAGAAAGCAACTGATGAACACTAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 538867 294 + 19675229 --TTTC--------------------------TGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCTCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTATAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACATAGATTAACACAGAAAGCAACTGATGAACACTAAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478482 294 + 16847902 --TTTC--------------------------TGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCAGGAAGGACACAGATTAACACACAAAGCAACTGATGAACACTAAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 411973 294 - 91754291 --TTTC--------------------------TGGGCCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGAAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCATAGCCCTTGTAGCCATTGCATTCGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGGTTAACACAGAAAGCAACTGATGAACACTAAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569377 294 - 1977891 --TTTC--------------------------TGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACACAAAGCAACTGATGAACACTAAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 448768 294 + 7796314 --TTTC--------------------------TGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAACGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCAGGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGAAAGCAACTGATGAACACTCAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 927931 291 - 74750902 --TTCC--------------------------TGGG-CCTTTGCAGGGTCT-TGCCCAGCTTGAGTTCCCCAGCAC--TCATCCGCCTCCTGGCCGTGG--CCCTACGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCGTGGTCACAGTAGCCCCTACTGCACGGGGACACACAGGTGAAGCCGCTCTGGGGGCCGTAAACCAGGTTGTAGCCCTCGTAGCCACTGCATTTGAAGTAAGTCCTCAGCATGCTCACGTTCACTGTCAGGAAGAACACAGGTGAACACAGAAAGCAACCGATGGACACAAAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456234 291 + 17725628 --TTCC--------------------------TGGG-CCCTTGCAGGGTCT-GGCCCAGCTTGGGCTCCCCAGCAC--TCATCCACCTCCTGGCCGTGG--CCCTACGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACACAGGTGAAGCCGCTCTGGGGGTCGTAAACCAGGTCGTAGCCCTCATAGCCACTGCATGTGAAGTAAGCCCTCAGCATGCTCACGCTCACTGTCAGGAGGAACACAGGTGAACACAGAGAGCAGCCGGTGAACAGGAAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 419697 290 - 6778120 --TTCC--------------------------TGGG-CCCTTGCAGGGTCT-TGCCCAGCTTGGGCTCCCCAGCAC--TCATCCA-CTCCTGGCCGTGG--CCCTACGCACCTGCAGTGGGGCCCGCTGGGTAGGTGCTGGCACTGGCCTCCTTGGTCACAGTAGCCCCTACTGCACGGGGACACACAGGTGAAACCGCTCTGGGGGTCGTAAACCAGCTCATAGCCCTTGTAGCCACTGCATGTGAAGTAAGCCCTCAGCATGCTCACGTTCACTGTCAGAAGGAACACAGGTGAACACAGAAAGCAACCGATGAACACGAAAT i cebCap1.NW_016107444v1 C 0 I 209 s aotNan1.NW_018503669v1 64252 290 - 69927 --TTCC--------------------------TGGG-CCTTTGCAGTGTCT-TG-CCAGCTTGGGCTCCCCAGCAC--TCATCCACCTCCTGGCCGTGG--CCCTACACACCTGCAGCGGGGCCCGCTGGGCAGGTGCTGGCACTGGCCTCCGTGGTCACAGTAGCCCCGACTGCACGGGGACACACAGGTGAAGCCGCTCTGGGGGCCGTAAACCAGGTCGTAGCCCTCGTAGCCACTGCATTTGAAGTAAGCCCTCAGCATGCTCACGTTCACTGTTAGGACGAACACAGGCGAACACAGAAAGCAGCCAATGAACACAAAAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25897660 293 - 114275543 --TTCC--------------------------TGGACCGCCAGCAGAGTCT-TGCCCAGTTTGGATTCCCC-TCACTGTCTTTCCCCTCCTGCACCCGG--CCCCACGCACCTGCAGCGGGGCCCATCCGGCAGGTGCTGGCACTGGCCACCGTGATCACAGAAGCCCTCACTGCACGGGGACACGCAGGTGAGGCCGCTCTCGGGGCTGTAGACCATGTGGTAGCCCTTGTAGCCACTACAGCTGAAGTAAGTCTTCAGCGTGCTCAAGTTCACTGTCAGGGAGGACACGGATTAACATGGAAAGCAACTGATTAGCACTAAat i micMur3.chr1 C 0 I 1544 s proCoq1.NW_012133858v1 7413661 294 + 22200726 --TTCC--------------------------CGGACCGCTAGCAGAGTCT-TGCCCAGTTTGGATTCCCCAGCACTGTCTTTCCCCTCCTGCGCCCCG--CCCTACGCACCTGCAGCGGGGCCCGTCCGGCAGGTGCTGGCACTGGCCTCCGTGATCGCAGTAGCCTTCACTGCACGGGGACACGCAGGTGAGGCCGCTCTGGGGGCTGTAGACCATGTGGTAGCCCTTGTAGCCACTGCAGCTGAAGTACGTCTTCAGCGTGCTCAAGTTCACTGTCAGGTAGGACACAGATTAACATGGAAAGCAACTGATTAACACTAAAT i proCoq1.NW_012133858v1 I 624 C 0 s otoGar3.GL873829 409673 280 - 608964 --TTCC--------------------------CGGACCGCTAGCAGAGCCT-GGTCCAGCTA----------GCGCTGCCTCCCACGTCCCGCGCCCGG--CCCTAAGCACCTGCAGCGGGGCCCATCCGGCAGGTGCTGGCACTGGCCTCCGTGATCACAGAAGCCCTCACTGCACGGCGACACGCAGGTGAGGCCGCGCTGGGGGCTGTAGGACAGGTAGTAGCCCTTGTAGCCACTGCAGTTGAAGTAAGTCTTCAATGTACTTATGTTCACTGTC----AGGACACGGATGGACACGGAAAGCAATGGATTAACACTAGAA i otoGar3.GL873829 I 18 C 0 s mm10.chr16 65426731 289 - 98207768 --TTCC--------------------------TGGGCCTACTGTGGTGTCT-CGTCAAATCTGAGTTCCCCAGTGC-----TTTGCTTTCCTGCCCCAGGCCCCTACCCACCTGCATTGGGGCCCATCTGGCAGGTGCTTGCATTGGCCTCCATTGTGACAGTAGCCCTCACTACATGGGGACACACAGGTGACACCATCCTGTGGGCTGTAGACCAGGTGGTAGCCTTTGTAGCCATCACATGTGAAGTACTCCTCCAGCATACTTAGGTTCACTGT-AGGCAGGAAAAGGATACATGGAGTAAGCAAACCACAGA-GGTAAAT i mm10.chr16 I 28 C 0 s canFam3.chr33 29064102 285 + 31377067 --TTTC--------------------------TACGCCCCTTGCGGTATCTGTGCCCGGCCTGGAGTCTCCGGCTCTG-----CTCGTCCTGCCCTCTC--CCCGACTCACCTGCAGCGGGGCCCTTGGGGCAGGTGCTGACACTGGCCTCCGTGCTTACAATAGCCCTCACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGCGGTAGTCCTTGTAGCTGTTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTC----AGGACACAGATGAACATGGAAAGCAATCAAT-AGCACCGGAt i canFam3.chr33 I 28 C 0 s dasNov3.JH569502 3888400 308 + 6579706 GTTTTCACTTGCCATGGGGAACCATGGCATAACTGGCCCCTTGTCGTATTT-TGCCCA---------CCACAGT----CCTCCCACCTCCTGA-CACTG--CCCCCCTCACCTGCAGCGGGCCCCAGTGGGCAGGTGCTGGCACCGGCCTCCGTGCTTACAGAAGCCCGTGCTGCACGGGGACACGCAGGTGAAGCCGCTCTGCGGGCTGTAGGCCAGGCGGTACCCCTTGTAGCCACTGCATCTGAAGTAAGTCTCCAGTGTGCTCACGTTCACTGCCAGGCAGGACACAGATTAACATGGAAATCAACTGGCTGGCACCAAAT i dasNov3.JH569502 C 0 C 0 a score=12292.000000 s hg38.chr3_KI270779v1_alt 119612 1 + 205312 C s panTro5.chr3 200103202 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81224 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47739 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856426 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456389 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63636 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539161 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478776 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412267 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569671 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449062 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928222 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456525 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 64542 1 - 69927 C i aotNan1.NW_018503669v1 C 0 I 144 s proCoq1.NW_012133858v1 7413955 1 + 22200726 T i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 409953 1 - 608964 T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65427020 1 - 98207768 T i mm10.chr16 C 0 C 0 s canFam3.chr33 29064387 1 + 31377067 c i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3888708 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I a score=620584.000000 s hg38.chr3_KI270779v1_alt 119613 83 + 205312 AGtaccttttcagccacgaattcc-tt-----------tt----cgggtgttt--------atcctgagaaataattggagaagtgcacagatacatatgcccctgg s panTro5.chr3 200103203 83 + 202621043 Aataccttttcagccacgaattcc-tt-----------tt----cgggtgttt--------atcctgagaaataattaaagaagtgcacagatacatatgcccctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81225 83 + 190779 Aataccttttcagccacgaattcc-tt-----------tt----cgggtgttt--------atcctgagaaataattaaagaagtgcacagatacatatgcccctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47740 83 + 106623 Aataccttttcagccacgaattcc-tt-----------tt----cgggtgttt--------atcctgagaaataattagagaagtgcacaaatacatatgctcctgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856427 83 + 123690457 Aataccttttcagccacgaattcc-tt-----------tt----tgggtgttt--------atcctgagaaataagtaaagaagtgcacagatacatatgcccctgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456390 83 + 204787373 AATACCTTTTCAACCACGAATTCT-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63637 83 + 192460366 AATACCTTTTCAACCACGAATTCT-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539162 83 + 19675229 AATACCTTTTCAACCACGAATTCT-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478777 79 + 16847902 AATACCTTTTCAACCACGAATTCC-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAA----TAGAGAGGTGCACAGATACATATGCCCCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412268 79 - 91754291 AATACCTTTTCAACCACGAATTCC-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAA----TAGAGAGGTGCACAGATACATATGCCCCTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569672 83 - 1977891 AATACCTTTTCAACCACGAATTCC-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449063 82 + 7796314 AATACCTTTTCAACCACGAATTCC-TT-----------TT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGGTGCGCAGATACATATGCCCC-GC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928223 45 - 74750902 -------------------------------------------------------------CTCCTGAGAAACGACTAGAGAAGTGCAC-GATACGTATGTCCCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456526 44 + 17725628 -------------------------------------------------------------CTCCTGAGGAACGACCAGAGACATGCA--GATACATACGTCCCTGG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7413956 84 + 22200726 Aatacattttcactcaagaatttcatt-----------tt----taggtgatc--------attctgagaaataattggaaaggtgcacaaatgcatatgtccttgg i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 409954 95 - 608964 Aatacctttccactcaagaatttcatttcactcaagaatt----tcagtgatc--------attctgagaaataattggaaaagtgcacaaatacgtatgtccttgg i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65427021 95 - 98207768 CATTCCTTTCCATCAGGTAGTCAA-GT-----------TTCAGGCAGGTGTTTATGAGATGTTTCTGAGAAACATCTGGTCAAGTGCCTAGAGTCCTGTATCCGTAG i mm10.chr16 C 0 I 573 s canFam3.chr33 29064388 84 + 31377067 tatacctcttcaatcgggaattctgtt-----------tt----caggcattt--------atcctgagaaatccttggaaaagcatgcaaatctgtatgttcatgg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3888709 70 + 6579706 --------------AATTTGttccatt-----------tt----caagggtta--------atcctcagaaatatttggaaaagaacacgaatacatatgtttgtgg i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e aotNan1.NW_018503669v1 64543 144 - 69927 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I a score=691481.000000 s hg38.chr3_KI270779v1_alt 119696 74 + 205312 acgttcagatcagcatggtggataat-------------------------agtaac---gtttcagaagtag-ggtctggttaaataa--actactgcacatcc s panTro5.chr3 200103286 74 + 202621043 acgttcagatcagcgtggtggataat-------------------------agtaac---gtttcagaagtag-agtctggttaaataa--actactgcacatcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81308 74 + 190779 acgttcagatcagcgtggtggataat-------------------------agtaac---gtttcagaagtag-agtctggttaaataa--actactgcacatcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47823 77 + 106623 acgttcagatcagcgtggtggataat-------------------------agtaacaatgtttcagaagtag-ggtctggttaaataa--actactgcacatcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856510 77 + 123690457 acattcagatcagcgtggtggataat-------------------------agtaacaacatttcagaagtgg-ggtctggttaaataa--actactgcacatcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456473 74 + 204787373 ATATTCAGATCAGCGTGGTGGATAAT-------------------------AGTAACAACGTTTCAGAAGTGG-GGTCGGGTTAAATAA-----ACTGCACATCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63720 74 + 192460366 ATATTCAGATCAGCGTGGTGGATAAT-------------------------AGTAACAACGTTTCAGAAGTGG-GGTCGGGTTAAATAA-----ACTGCACATCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539245 74 + 19675229 ATATTCAGATCAGCGTGGTGGATAAT-------------------------AGTAACAACGTTTCAGAAGTGG-GGTCGGGTTAAATAA-----ACTGCACATCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478856 74 + 16847902 ATATTCAGATCAGCGTAGTGGATAAT-------------------------AGTAACAATGTTTCAGAAGTGG-GATGGGGTTAAATAA-----ACTGCATATCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412347 74 - 91754291 ATATTCAGATTAGCGTGGTGGGTAAT-------------------------AGTAACAACGTTCCAGAAGTGG-GGTCGGGTTAAATAA-----ACTGCACATCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569755 74 - 1977891 ATATTCAGATCAGCGTGGTGGATAAT-------------------------AGTAACAATGTTTCAGAAGTGG-GGTCGGGTTAAATAA-----ACTGCATATCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449145 74 + 7796314 ATATTCAGATCAGCGTGGTGGATAAT-------------------------AGTAACAACGTTTCAGAAGTGG-GGTCGGGTTAAATAA-----ACTGCACATCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928268 75 - 74750902 GCATTCGGATCAGCATGGTGGAAA---------------------------TGCAACAATGTTTCAGAAGTGG-GGTCTGGTTAAATGA--ACTACTGCGGATCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456570 77 + 17725628 ACATTCCGATCAGCGCGCTGGAGAAT-------------------------GGTGAGAACGTTTCAGAAGTGG-GGTCTGGTTAAATAA--ACTACTGCATATCG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7414040 77 + 22200726 atattcagatcagcgcggttgataat-------------------------agcaacaatgtttaacaagagg-ggtcttgttaaataa--gttactatatatcc i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410049 76 - 608964 atattcagatcagcgtggttgatgat-------------------------ggcaaccatgtttaacaagagg-ggtcttgttaaataa--gtt-ttgtgtattc i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29064472 79 + 31377067 acgtccagagcagcgtggtttataat-------------------------agcaaCAGTGTTTAATAGGTGA-GGTTTTGTTAAACAAGGAATACTGTGCAACC i canFam3.chr33 C 0 I 58 s dasNov3.JH569502 3888779 103 + 6579706 atgtccagattagcatggtttataattaaaccagggtgggtgggtggagagagtaacaatgtgtaataggaggagggctggttaaataa--gttagtacatatcc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e aotNan1.NW_018503669v1 64543 144 - 69927 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I a score=114999.000000 s hg38.chr3_KI270779v1_alt 119770 11 + 205312 ttaccaaggga--- s panTro5.chr3 200103360 11 + 202621043 ttaccaaggga--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81382 11 + 190779 ttaccaaggga--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47900 11 + 106623 ttaccaaggga--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856587 11 + 123690457 ttaccaaggga--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456547 11 + 204787373 TTACCAAGGGA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63794 11 + 192460366 TTACCAAGGGA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539319 11 + 19675229 TTACCAAGGGA--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478930 11 + 16847902 TTACCAAGGGA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412421 11 - 91754291 TTACCAAGGGA--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569829 11 - 1977891 TTACCAAGGGA--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449219 11 + 7796314 TTACCATGGGA--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928343 11 - 74750902 TTACCAAGGGA--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456647 11 + 17725628 CTACCAAGGGA--- i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7414117 11 + 22200726 ctatcaaggga--- i proCoq1.NW_012133858v1 C 0 I 16 s otoGar3.GL873829 410125 11 - 608964 ctaccaaggga--- i otoGar3.GL873829 C 0 I 1 s dasNov3.JH569502 3888882 14 + 6579706 ttccaaaaggaata i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e canFam3.chr33 29064551 58 + 31377067 I e aotNan1.NW_018503669v1 64543 144 - 69927 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I a score=71107.000000 s hg38.chr3_KI270779v1_alt 119781 74 + 205312 tGGTGCTTCCTATGGAAAAAGTTTCC--TAGGGAAAAAGG------------------------------------------------TTCCTAGGGAAAAAGGTTCCTGTGGAAAAAGGTTCC s panTro5.chr3 200103371 74 + 202621043 tGGTGCTTCCTATGGAAAAAGTTTCC--TAGGGAAAAAGT------------------------------------------------TTCTTAGGGAAAAAGGTTCCTAGGGAAAAAGGTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81393 74 + 190779 tGGTGCTTCCTATGGAAAAAGTTTCC--TAGGGAAAAAGG------------------------------------------------TTCCTAGGGAAAAAGGTTCCTGTGGAAAAAGGTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47911 74 + 106623 tGGTGCTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT------------------------------------------------TTCCTAGGGAAAAAGGTTCCTGTGGAAAAAGGTTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856598 122 + 123690457 tGGTGGTTCCCATGGAAAAAGTTTCC--TAGGGAAAAAGGTTCCTATGGAAAAAGGTTCCAAGGGATGGTGGTTCCTATGGAAAAAGTTTCCTAGGGAAAAAGGTTCCTATGGAAAAAGGTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456558 42 + 204787373 TGACAGTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT--------------------------------------------------------------------------------TTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63805 42 + 192460366 TGACAGTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT--------------------------------------------------------------------------------TTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539330 42 + 19675229 TGACAGTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT--------------------------------------------------------------------------------TTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478941 42 + 16847902 TGACAGTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT--------------------------------------------------------------------------------TTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412432 26 - 91754291 TGACAGTTCCTATGGACAAAGTTTC--------------------------------------------------------------------------------------------------C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569840 42 - 1977891 TGACAGTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT--------------------------------------------------------------------------------TTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449230 42 + 7796314 TGACAGTTCCTATGGAAAAAGTTTCC--TATGGAAAAAGT--------------------------------------------------------------------------------TTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928354 18 - 74750902 TGCC---------------AGTTTCC--TATGG-AA---------------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456658 19 + 17725628 TGAC---------------AGTTTCC--TATGGAAA---------------------------------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 410137 15 - 608964 tGACAATTTCAATGG------------------------------------------------------------------------------------------------------------- i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3888896 24 + 6579706 ---------ttgtgcgaccagtaaacatgatgG------------------------------------------------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7414128 16 + 22200726 I e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e canFam3.chr33 29064551 58 + 31377067 I e aotNan1.NW_018503669v1 64543 144 - 69927 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I a score=99491.000000 s hg38.chr3_KI270779v1_alt 119855 12 + 205312 TATGGAAAATGC s panTro5.chr3 200103445 12 + 202621043 TATGGAAAATGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81467 12 + 190779 TATGGAAAATGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47985 12 + 106623 TATGGAAAATGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856720 12 + 123690457 TAGGGAAAATGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456600 12 + 204787373 TATGGAAAATGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63847 12 + 192460366 TATGGAAAATGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539372 12 + 19675229 TATGGAAAATGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478983 12 + 16847902 TATGGAAAATGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412458 12 - 91754291 TATGGAAAATGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569882 12 - 1977891 TATGGAAAATGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449272 12 + 7796314 TACGGAAAATGC i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7414144 12 + 22200726 TAAGGAAAATGC i proCoq1.NW_012133858v1 I 16 C 0 s otoGar3.GL873829 410152 12 - 608964 TGTGGaaaatgc i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3888920 12 + 6579706 AATAGAAaacat i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e canFam3.chr33 29064551 58 + 31377067 I e aotNan1.NW_018503669v1 64543 144 - 69927 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I e calJac3.chr17 928372 0 - 74750902 C e saiBol1.JH378146 456677 0 + 17725628 C a score=110152.000000 s hg38.chr3_KI270779v1_alt 119867 15 + 205312 TTTCCTGaagagcac s panTro5.chr3 200103457 15 + 202621043 TTTCCTGaagagcac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81479 15 + 190779 TTTCCTGaagagcac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 47997 15 + 106623 TTTCCTGaagagcac i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856732 15 + 123690457 TTTCCTGaagagcac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456612 15 + 204787373 TTTCCTaaagagcgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63859 15 + 192460366 TTTCCTaaagagcgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539384 15 + 19675229 TTTCCTaaagagcgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 478995 15 + 16847902 TTTCCTaaagagcgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412470 15 - 91754291 TTTCCTaaagagcgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569894 15 - 1977891 TTTCCTaaagagtgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449284 15 + 7796314 TTTCCTaaagagtgt i colAng1.NW_012118932v1 C 0 C 0 s proCoq1.NW_012133858v1 7414156 15 + 22200726 TTTCGCaaagagcat i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410164 15 - 608964 tttactaaggagtgt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29064609 15 + 31377067 tttttttaagagcat i canFam3.chr33 I 58 C 0 s dasNov3.JH569502 3888932 15 + 6579706 gatggttaaaagcac i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e aotNan1.NW_018503669v1 64543 144 - 69927 I e cebCap1.NW_016107444v1 419987 209 - 6778120 I e calJac3.chr17 928372 0 - 74750902 C e saiBol1.JH378146 456677 0 + 17725628 C a score=1347115.000000 s hg38.chr3_KI270779v1_alt 119882 103 + 205312 atgctttgaaggtggccagacttgggtggaaactgaaactctgctagtgactagatgtgtaattcagg----ga-----------------------------acattccttcactctttcagcttcagtttcctt s panTro5.chr3 200103472 103 + 202621043 atgctttgaaggtggccagacttgggtggaaactgaaactctgctagtaactagatgtgtaattcagg----ga-----------------------------acattccttcactctttcagcttcagtttcctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81494 103 + 190779 atgctttgaaggtggccagacttgggtggaaactgaaactctgctagtaactagatgtgtaattcagg----ga-----------------------------acattccttcactctttcagcttcagtttcctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48012 103 + 106623 atgctttgaaggtggccacacttgggtggaaactgaaactctgctggtaactagatgtgtaattcagg----ga-----------------------------acattccttcactctttcagcttcagtttcctt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856747 103 + 123690457 atgctttgaaggtggccagacctgggtggaaactgaaactctgctagttactagacgtgtaattcagg----ga-----------------------------acactctttcactctttcagcttcagtttcctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456627 103 + 204787373 atgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcagg----ga-----------------------------acattccttaactctttcagtgtcagtttcctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63874 103 + 192460366 atgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcagg----ga-----------------------------acattccttaactctttcagtgtcagtttcctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539399 103 + 19675229 atgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcagg----ga-----------------------------acattccttaactctttcagtgtcagtttcctt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479010 103 + 16847902 atgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcagg----ga-----------------------------acattccttaactctttcagtgtcagtttcctt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412485 102 - 91754291 atgctttgaaggtggccagacccgggttgaaactgaaactctactagtaactagatgtgtaattcagg----ga-----------------------------acatt-cttaactctttcagtgtcagtttcctt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 569909 103 - 1977891 atgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcagg----ga-----------------------------acattccttaactctttcagtgtcagtttcctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449299 103 + 7796314 atgctttgaaggtggccagacctgggttgaaactgaacctctactagtaactagatgtgtaattcagg----ga-----------------------------acattccttaactctttcagtgtcagtttcttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928372 101 - 74750902 ATgctttgaaggtggccagacctgagttgaaactcaaactc-actggtagctagttgtgtaattcagg----ga-----------------------------acactccttatctc-tgcagcttcagtttcctt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456677 103 + 17725628 ATgctttgaaggtggccagaccggagtcgaaactcaaactctgctcgtaactagttgtgtgattcagg----ga-----------------------------acattccttacctcgtgcagtctcagtttcctt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 420196 107 - 6778120 ATgctttgaaggtggccagacctgagttgaaactcaaactctgctcctaactagttgtgtgattccgggaacga-----------------------------acgttccttatctcttgcagcttcagtttcctt i cebCap1.NW_016107444v1 I 209 C 0 s aotNan1.NW_018503669v1 64687 102 - 69927 ATgctttgaaggcggccagacctgagttgaaactcaaactctgc-cgtaactagttgtgtgattcagg----ga-----------------------------acattccttatctcgtgcagcttcagtttcctt i aotNan1.NW_018503669v1 I 144 C 0 s proCoq1.NW_012133858v1 7414171 103 + 22200726 atgctttgaacttggccagacctgagttgcaactcagagtctactattaactagctgtgtgattcagg----gg-----------------------------aaatttcttaactctttcagcctcagtttcctt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410179 103 - 608964 atgctttgaggttcatcagacttgattggtaactcagattctactattaactagctgcgcgacttagg----gg-----------------------------agctttcttaactcttttagcctcagtttcctt i otoGar3.GL873829 C 0 I 334 s canFam3.chr33 29064624 132 + 31377067 acgctttgaagtaaaccagacctacgttgaaattcaagctctactactaactagttgtgtgctttggg----gaaatttcttTTTTTTTTTTGGGGGGGggggaaatttcttaactccttcagcctcagtttcctt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3888947 102 + 6579706 gtgtttggaagttggccagacttgacttgaaactcaaactc-actatttactagttgtgtggtttggg----gg-----------------------------aaatttcttaactctttcggcctcagcttcctt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I a score=86414.000000 s hg38.chr3_KI270779v1_alt 119985 6 + 205312 atcttt s panTro5.chr3 200103575 6 + 202621043 atcttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81597 6 + 190779 atcttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48115 6 + 106623 atcttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856850 6 + 123690457 atcttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456730 6 + 204787373 atcttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63977 6 + 192460366 atcttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539502 6 + 19675229 atcttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479113 6 + 16847902 atcttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412587 6 - 91754291 atcttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570012 6 - 1977891 atcttt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449402 6 + 7796314 atcttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928473 6 - 74750902 atgtct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456780 6 + 17725628 atgttt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 420303 6 - 6778120 gtgttt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64789 6 - 69927 atgttt i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414274 6 + 22200726 atcttt i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410616 6 - 608964 atcttt i otoGar3.GL873829 I 334 C 0 s canFam3.chr33 29064756 6 + 31377067 atctTT i canFam3.chr33 C 0 I 572 s dasNov3.JH569502 3889049 6 + 6579706 atcttt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I a score=1430923.000000 s hg38.chr3_KI270779v1_alt 119991 131 + 205312 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtc--cacagtactcagtacagtgccggacacacagtaagcactcaaacaatggtaatgattattatAATGTATTT s panTro5.chr3 200103581 127 + 202621043 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtc--cacagtactcagtacagtgccggacacacagtaagcact----caatggtaatgattattatAATGTATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81603 126 + 190779 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtc--cacagtactcagtacagtgccggacacacagtaagcact----caatggtaatgattattatAATGTA-TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 48121 131 + 106623 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtc--cacagtactcagtacactgccggacacacagtaagcactcaaacaatggtaatgattattatAACGTATTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856856 131 + 123690457 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtc--cacagtactcagtacactgcctgacacacagtaagcactccaaaaatggtaatgattattatAACGTATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456736 131 + 204787373 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggaaatgattattCTAATGTATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 63983 131 + 192460366 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggaaatgattattCTAATGTATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539508 131 + 19675229 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggaaatgattattCTAATGTATTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479119 131 + 16847902 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggtaatgattattCTAACGTATTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412593 131 - 91754291 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatggggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcaatcaaaaaatggtaatgattattCTAACGTATTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570018 131 - 1977891 aaaaggaaattatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggtaatgattattCTAATGTATTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449408 131 + 7796314 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtc--cacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggtaatgattattCTAACGTATTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928479 121 - 74750902 aaaagcacagga----------acttacgctgctgtgagatttaaatgagataacgtgtc--cacaatactccgtacactgcctgacacacagtaaaccctcaaaaaacgaaaatggttattatAACGTATTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456786 121 + 17725628 aaaagcatagga----------acttacgctgctgtgagatttaaatgagataatatatc--cacaatacttagtacactgcccaacacacagtaaacactcaaaaaatggaaatgactattatAACACATTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 420309 121 - 6778120 aaaagcatagga----------acttacactgcggtgagatttaaatgagataatatgtc--cacaatacttagtacactgcccgacacacagtaaacactcaaaaaatggaaatgattattatAACATATTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64795 121 - 69927 aaaggcatcgga----------acttacgctgctgtgagatttaaatgagataatatgtc--cacaatacccagtacactgcctgacacagagtaaacactcaaaaaatggaaatgattattatAACATATTT i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414280 116 + 22200726 aaaaggaaatgataataatagcac--------ttgtgagatttaaatgagataaag------cagagtactcagtacagtgcctgacgcatagtaagcactcagcaaatggtaattattatga---tatattT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410622 126 - 608964 aaaatga----ttaataatagcacttactttgttgtgagatttaagtgagataatgcata--cagggtactcattacagtgcctgacacat-gtaagccctcagcaaatggtaactttCATGACCTTATATTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3889055 118 + 6579706 aaaaggaaacga---taatagcaactactttgttgtgaaatttaaatgagataatatataggaagagtactctgtgcagtgcctgatactc------------aaaaacagtggttattattATAACatattt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e canFam3.chr33 29064762 572 + 31377067 I a score=279488.000000 s hg38.chr3_KI270779v1_alt 120122 25 + 205312 TAAAATAT----GACACT-----ATATTCAAACA---- s panTro5.chr3 200103708 25 + 202621043 TAAAATAT----GACACT-----ATATTCAAACA---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 81729 25 + 190779 TAAAATAT----GACACT-----ATATTCAAACA---- i panPan2.chrUn_NW_014024201v1 C 0 I 3599 s gorGor5.CYUI01000576v1 48252 25 + 106623 TAAAATAT----GACACT-----ATATTCAAACA---- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120856987 25 + 123690457 TAAAATAT----GACACT-----ATATTCAAACA---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456867 25 + 204787373 TAAAATAT----GACACT-----ATATTCAAACC---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64114 25 + 192460366 TAAAATAT----GACACT-----ATATTCAAACC---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539639 25 + 19675229 TAAAATAT----GACACT-----ATATTCAAACC---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479250 25 + 16847902 TAAAATAT----GACACT-----ATATTCAAACC---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412724 25 - 91754291 TAAAATAT----GACACT-----ATATTCAAACC---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570149 25 - 1977891 TAAAATAT----GACACT-----ATATTCAAACC---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449539 25 + 7796314 TAAAAGAT----GACACT-----ATATTCAAACC---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928600 25 - 74750902 TAAAATGT----GACACT-----ATATTCAAATG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456907 25 + 17725628 TAAAATAT----GCCACT-----ATATTCATACA---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 420430 25 - 6778120 TAAAATGT----GACACT-----ACATTCAAACA---- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64916 25 - 69927 TAGAATAC----GACACT-----ATATTCAAACA---- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414396 26 + 22200726 -AAAATAT--AAGACACT-----ATCTTCAAACA---- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410748 32 - 608964 AAAAATAT--AAGACACTGgggcagctcctatgg---- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29065334 27 + 31377067 taaaaTAT--AGCACACC-----ACATTAAAATG---- i canFam3.chr33 I 572 C 0 s dasNov3.JH569502 3889173 32 + 6579706 -aaaatatataatacatt-----atattCAACGAATCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I a score=2917989.000000 s hg38.chr3_KI270779v1_alt 120147 287 + 205312 TACCATCAT-----AATATGTC-----------------------------------------------------------AAATGGGAATGTGGACAGA-ATATATGAGA------CAACCTGTTCACAACTGTTTAA-TGA---GGAGGTTTTCCAACATTAGGAATGATTtg----atccttcagt-----aaaaaatgga--tgtctgaaggttcctag-gcat--aa---aagaaagttcagaaggatatgtaggaaatactgttgtctctctggggattgggattacaggg--tttttttcc---tcttttctttttgttaagtttgtgtttcctaaagtttctgcaataaacatacgatg---cttgtataataaaaaTT s panTro5.chr3 200103733 286 + 202621043 TACCATTAT-----AATATGGC-----------------------------------------------------------AAATGGGAATGTGGACAGA-ATATATGAGA------CAACCTGTTCACAACTGTTTAA-TCA---GGAGGTTCTCCAGCATTAGGAatgatttg----at-cttcaat-----aaaaaatcaa--tgtgtgaaggttcctag-gcat--aa---aagaaagttcagaaggatatgtacgaaatattgttgtctctctggggattgggattacaggg--tttttttcc---tcttttctttttgttaagtttgtgtttcctaaagtttctgcaataaatgtacgatg---cttgtataataaaaaTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48277 287 + 106623 TACCATTAT-----AATATGGC-----------------------------------------------------------AAATGGGAATATGGACACA-ATATATGAGA------CAACCTGTTCACAATTGTTTAA-TGA---GGAGGTTATCCAACATTAGGAATGATTtg----atccttcaat-----aaaaaatcaa--tgtgtgaaggttcctag-gcat--aa---aagaaagttcagaaggatatgtacgaaatattgttgtctctctggggattgggattacaggg--tttttttcc---tcttttctttttgttaagtttgtgtttcctaaagtttctgcaataaacatacgatg---cttgtataataaaaaTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857012 286 + 123690457 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGACACA-ATATATGAGA------CAACCTGTTCACAATTGTTGAA-CGa---gcaggttatccaacattaggaatgatttg----atccttcaat-----aaaaaatcga--tgtgtgaaggttcctag-gcat--aa---aagaaagttcagacggatatgtatgaaatattgttgtctctctgggggttgggattacaggg--tttttttcc---ttttttctttttgttaagtttg-gtttcctaaagtttctgcaataaacatacgatg---cttgtataataaaaaTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202456892 286 + 204787373 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAAATGTTTAA-CGA---GGAGGTTATCAAACATTAGGAATGATTTG----ATCCTTCAAt-----aaaaaatcga--tgtgtgaa-gttcttag-gcat--aa---atgaaagttcagaaggatatgtacaaaatattgttgtctctctggggattgggattacaggg--ttttttccc---tcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggata---cttgtataataaaaaTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64139 286 + 192460366 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAAATGTTTAA-CGa---ggaggttatcaaacattaggaatgatttg----atccttcaat-----aaaaaatcga--tgtgtgaa-gttcttag-gcat--aa---atgaaagttcagaaggatatgtacaaaatattgttgtctctctggggattgggattacaggg--tttttttcc---tcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggata---cttgtataataaaaaTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539664 286 + 19675229 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAAATGTTTAA-CGA---GGAGGTTATCAAACATTAGGAATGATTTG----ATCCTTCAAt-----aaaaaatcga--tgtgtgaa-gttcttag-gcat--aa---atgaaagttcagaaggatatgtacaaaatattgttgtctctctggggattgggattacaggg--ttttttccc---tcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggata---cttgtataataaaaaTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479275 286 + 16847902 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAAATGTTTAA-CGA---GGAGGTTATCAAACATTAGGAATGATTTG----ATCCTTCAAt-----aaaaaatcga--tgtgtgaa-gttcttag-gcat--aa---aaggaagttcagaaggatatgtacaaaatattgttgtctctctggggattgggattacaggg--gttttttcc---tcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggata---cttgtataataaaaaTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 412749 285 - 91754291 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAATTGTTTAA-CGa---ggaggttatcaaacattaggaatgatttg----atccttcaat-----aaaaaatcga--tatgtgaa-gttcttag-gtgt--aa---acgaaagttcagaagaatatgtac-aaatattgttgtctctctggggattgggattacaggg--gttttttcc---tcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggata---cttgtataataaaaaTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570174 286 - 1977891 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAAATGTTTAA-CGA---GGAGGTTATCAAACATTAGGAATGACTTG----ATCCTTCAAt-----aaaaaatcga--tgtgtgaa-gttcttag-gcat--aa---acggaagttcagaaggatatgtacaaaatattgttgtctctctggggactgggattacaggg--gttttttcc---tcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggata---cttgtataataaaaaTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449564 288 + 7796314 TACCATTAT-----AATATGTC-----------------------------------------------------------AAATGGGAATATGGATACA-ATATATGAGA------CAATCTGTTCACAATTGTTTAA-CGA---GGAGGTTATCAAACATTAGGAATGATTTG----ATCCTTCAAT-----AAAAAATCGA--TGTGTGAA-GTTCTTAA-GCAT--AAAAGAAGAAAGTTCAGAAGGATGTGTACAAAATATTGTTGTCTCTCTAGGGATTGGCATTACAGGG---CTTTTTCC---TCTTTTCTTTTTGTTCAATTTGTGTTTCCTAAAGTTTCTGCAATAAATATAGGATA---CTTGTATAATAAAAATT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928625 287 - 74750902 T---ATTATAAAGCAATATGTG-----------------------------------------------------------AAATGGGAACATGGACACA-GCACATGAGA------TTGTCTGTTCACAACTGTTGaa-gaa---ggaggttaccaaacattaggaacgatttg----atccttcagt-----aaaaagccac--cgtgtgaaggttcctcg-gcat--aa---aagaaagctcagaaggaaatgcacaaaa---tattg--tctctgggcacgggaattacaggt--ttttctttcttctctcttctttttgttaaatgtttgtttcctacagtttctgcagtaaacatatgata---cttatataacaaaaaTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 456932 290 + 17725628 TACCATTATAAGGCAATATGTC-----------------------------------------------------------CAATGGGAATATGGACACA-ATATATGAGA------TACTCTGTTCACAACTGTTTAA-GGA---GGAGGTTATCAAACATTAGGAACGATTTG----ATCCTTCAAT-----AAAAAACCAG--TGTGTGAAGGTTCCtag-gcat--aa---aagaaagttcagaaggatatgtacaaaa---tattg--tctctggggattggaattacaggt--ttttctatcttctctcttctttttgttaaatgtatgtttcctaaagtttctgcaataaacatatgata---cttatataataaaaaTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 420455 296 - 6778120 CACCATTATAAGGCAATATGTC-----------------------------------------------------------AAATGGGAATATGGACATG-ATAGATGAGA------TACTCTGTTCACAGCTGTGTAA-GGA---GGAGGTTGTCAGACATTAGGAATGATTCG----ATCCTTCAAT-----AAAAAACCAA--CGTGTGAAGGTTCCtag-gcat--aa---aagaaagttcagaagggtatgtacaaaatgttgttg--tctctggggattggaattacaggt--ttttctttcttctctcttctttttgttaaatgtatgtttcctaaagtttctgcaataaacatatgatacttcttatataataaaaaTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 64941 290 - 69927 TACCATTATAAGGCAATATGTC-----------------------------------------------------------AAATGGGAATATTGACACA-ATATATGAGA------TACTCTGTTCACAACTGCTTAA-GGA---GGAGCTTATGAAATATTAGGAAT-ATTTG----ATCCTTCAAT-----AAAAAGCCAA--TGTGTGAAGGTTCCGAG-gcat--aa---aagaaggttcagaaaggtatgtacaaaatattgttg--tctctgggggttggaattgcaggg--ttttctttct--tctcttctttttgttaaatgtatgtttcctaaagtttctgcaataaacatatgata---cttatataataaaaaTT i aotNan1.NW_018503669v1 C 0 I 612 s proCoq1.NW_012133858v1 7414422 282 + 22200726 ---TATCATAAAATAATATGTC-----------------------------------------------------------AAATGGAAATATAGACACA-ATATATGAGT-------AATATGGTCATAATTGTTTAA-T------GAGGTTATCAAACATTAGGTATGATTTG----ATCCCTTAAT-----AAAAAATTGATATGTGTGAAAGTTCCTAG-GCAC--AA---AAGAAAGTTCAGAAGGATGTGTACAAAATATAGTTG--TCTCTGAGGATTGGGATTATGGGT--TATTTTTTT---C--CTTCTTTTTGTTAA-TTTGTGTTTCCTAGAGTTTCTGCAATAAACATATTATA---CTCATATAATAGAAATT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 410780 346 - 608964 ---ctcaaagaagtgagatgccggccccatatgccagaggtggcgggttcaaacccagccctggccaaaaactgaaaaaaaaAAAAGAAATATATATATATATATATGACTGTATTCAAACATATGCA-ATATGTCAAA-T------TGGAATAT-ACACGTAACATATGAGGTAATGCATTCCTTAAT-----AAAGAATTGATGTGTGTGAAGGCTCCtat-gcat--aa---aaataagttcagagggg-atgtacaaaatattgtta--tctctgaggattggaattacaggt--tgtttcttt---cctcttatttttgttaa-tttgtgtttcctaaagtttctataataaacatatT---------GTATAATATTAATT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29065361 292 + 31377067 ---TATGAT-----aaaataat-----------------------------------------------------------aaatgggaacacatataca-atatacaagg------taatatgttcacaattgcttaagtaa---taaggtcaccaaacattaggtactacttg----atccccttattataaaaaatattggtatgtgtgaagactcctaatgcat--aa---aagaaaattcagaaggataggtgcaaaatggacttg--tctttggggcttggaattacacgtgattttttttc---tctcttccttttgttaa-tctgtgtctcctcaagtttctacaataaacatattgta---cttgtataataaaaaCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889205 274 + 6579706 TGATAAAAT-----AGCATATC-----------------------------------------------------------AAATGGGAATAGTTACACA-ATATTCAAGG------TAATATGTTCACAATTGTTTAA-CTAATGAAAGGTCTTCAAGCATTAGgtatgatttg----attcct---t-----aacaaattaatatatttgaaggtccctgt-gtacgaaa---aataaagttcaaaaggatatgttcaaaatagagttg--tctctggggattgagattataggt--gattttttt---tt-----------tTAA---CGTGTTTCCTAAAATCTCTGCAATAAACACATTGCA----TTATATAATTAAAGTT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=16118.000000 s hg38.chr3_KI270779v1_alt 120434 2 + 205312 AT s panTro5.chr3 200104019 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48564 2 + 106623 AT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857298 2 + 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457178 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64425 2 + 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539950 2 + 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479561 2 + 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413034 2 - 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570460 2 - 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449852 2 + 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928912 1 - 74750902 -T i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 457222 1 + 17725628 -T i saiBol1.JH378146 C 0 I 621 s cebCap1.NW_016107444v1 420751 1 - 6778120 -T i cebCap1.NW_016107444v1 C 0 I 1 s proCoq1.NW_012133858v1 7414704 2 + 22200726 GT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 411126 2 - 608964 GT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29065653 2 + 31377067 GT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889479 2 + 6579706 GT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e aotNan1.NW_018503669v1 65231 612 - 69927 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=92534.000000 s hg38.chr3_KI270779v1_alt 120436 8 + 205312 -------------------AGGTTTTC s panTro5.chr3 200104021 8 + 202621043 -------------------AGGTTTTC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48566 8 + 106623 -------------------AGGTTTTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857300 8 + 123690457 -------------------AGGTTTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457180 8 + 204787373 -------------------AGGTTTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64427 8 + 192460366 -------------------AGGTTTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539952 8 + 19675229 -------------------AGGTTTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479563 8 + 16847902 -------------------AGGTTTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413036 8 - 91754291 -------------------AGGTTTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570462 8 - 1977891 -------------------AGGTTTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449854 8 + 7796314 -------------------AGGTTTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 928914 8 - 74750902 -------------------AGGTTTTC i calJac3.chr17 I 1 I 912 s saiBol1.JH378146 457844 8 + 17725628 -------------------AGGTTTTC i saiBol1.JH378146 I 621 C 0 s cebCap1.NW_016107444v1 420753 8 - 6778120 -------------------AGGTTTTC i cebCap1.NW_016107444v1 I 1 I 636 s aotNan1.NW_018503669v1 65843 8 - 69927 -------------------AGGTTTTC i aotNan1.NW_018503669v1 I 612 C 0 s proCoq1.NW_012133858v1 7414706 8 + 22200726 -------------------GGGTTTTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 411128 8 - 608964 -------------------GTGTGTTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29065655 8 + 31377067 -------------------GGGGTTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889481 27 + 6579706 GTGGGGGGTGTGTTTTTGTTTGTTTTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=45997.000000 s hg38.chr3_KI270779v1_alt 120444 8 + 205312 CTTAATTG--- s panTro5.chr3 200104029 8 + 202621043 CTTAATTG--- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48574 8 + 106623 CTTAATTG--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857308 8 + 123690457 CTTAATTG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457188 8 + 204787373 CTTAATTG--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64435 8 + 192460366 CTTAATTG--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539960 8 + 19675229 CTTAATTG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479571 8 + 16847902 CTTAATTG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413044 8 - 91754291 CTTAATTG--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570470 8 - 1977891 CTTAATTG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449862 8 + 7796314 CTTAATTG--- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 457852 8 + 17725628 TTTAATAG--- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 65851 8 - 69927 TTTAATAG--- i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414714 8 + 22200726 TTTATCAG--- i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 411136 8 - 608964 TTTTTAAA--- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29065663 7 + 31377067 -TTGGTTG--- i canFam3.chr33 C 0 I 18 s dasNov3.JH569502 3889508 11 + 6579706 TTTAAAAAAGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e mm10.chr16 65427116 573 - 98207768 I e cebCap1.NW_016107444v1 420761 636 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 928922 912 - 74750902 I a score=53901.000000 s hg38.chr3_KI270779v1_alt 120452 5 + 205312 CATAG s panTro5.chr3 200104037 5 + 202621043 CATAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48582 5 + 106623 CATAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857316 5 + 123690457 CATAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457196 5 + 204787373 CATAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64443 5 + 192460366 CATAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539968 5 + 19675229 CATAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479579 5 + 16847902 CATAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413052 5 - 91754291 CATAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570478 5 - 1977891 CGTAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449870 5 + 7796314 CATAG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 457860 5 + 17725628 CACAA i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 65859 5 - 69927 CGTAG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414722 5 + 22200726 CATAG i proCoq1.NW_012133858v1 C 0 I 7 s otoGar3.GL873829 411144 5 - 608964 CAATG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65427689 5 - 98207768 CACAG i mm10.chr16 I 573 C 0 s canFam3.chr33 29065688 5 + 31377067 CACAG i canFam3.chr33 I 18 C 0 s dasNov3.JH569502 3889519 5 + 6579706 CATAG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e cebCap1.NW_016107444v1 420761 636 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 928922 912 - 74750902 I a score=135587.000000 s hg38.chr3_KI270779v1_alt 120457 24 + 205312 ----TCAGGG-------CT--------T------------GCCTCCCTGCGCCTC s panTro5.chr3 200104042 24 + 202621043 ----TCAGGG-------CT--------T------------GCCTCCCTGTGCCTC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48587 24 + 106623 ----TCAGGG-------CT--------T------------GCCTCCCTGCGCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857321 24 + 123690457 ----TCAGGG-------CT--------T------------GCCTCCCTGCGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457201 24 + 204787373 ----TCAGGG-------TT--------T------------GCCTCCCTGGGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64448 24 + 192460366 ----TCAGGG-------TT--------T------------GCCTCCCTGGGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539973 24 + 19675229 ----TCAGGG-------TT--------T------------GCCTCCCTGGGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479584 24 + 16847902 ----TCAGGG-------TT--------T------------GCCTCCCTGGGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413057 8 - 91754291 ----TCAGGG-------TT------------------------------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570483 24 - 1977891 ----TCAGGG-------TT--------T------------GCCTCCCTGGGCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449875 24 + 7796314 ----TCAGGG-------TT--------T------------GCCTCCCCGGGCCTC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 457865 23 + 17725628 ----TCAGAG-------CT--------T-------------CCTTCCTGCTCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421397 24 - 6778120 ----TCAGAG-------CT--------C------------GCCTTCCTGCTCCTC i cebCap1.NW_016107444v1 I 636 C 0 s aotNan1.NW_018503669v1 65864 24 - 69927 ----TCAGAG-------CT--------T------------GCCTTCCTGCTCCTC i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414734 36 + 22200726 ----TGAGGT-------CT--------TTGCTCCCTTACTGCCTCCCCACTCCTC i proCoq1.NW_012133858v1 I 7 C 0 s otoGar3.GL873829 411150 33 - 608964 ------AGGG-------CT--------TTGCTCCCTTACTGCCT-CCTACTCCTC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65427694 31 - 98207768 ----TCGGGGATGCCCCCT--------T------------ACCTGACTGTGCCTG i mm10.chr16 C 0 I 5 s canFam3.chr33 29065693 32 + 31377067 ----TCAGGT-------CTAGGGGAGTT------------GTGTCCGTATGCCAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889524 27 + 6579706 GTTTGGAGGA-------GT--------T------------GTTTCCTTAT-CCTC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 928922 912 - 74750902 I a score=626177.000000 s hg38.chr3_KI270779v1_alt 120481 64 + 205312 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CCCTG-CTCCGG--GAGAGAGCG s panTro5.chr3 200104066 64 + 202621043 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CCCTG-CTCCGG--GAGAGAGCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48611 64 + 106623 -----------------CTACCCC-AATTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CACTG-CTCCGG--GAGAGAGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857345 64 + 123690457 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CCCTG-CTCCGG--GAGAGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457225 64 + 204787373 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CACTG-CTCCAG--GAGAGAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64472 64 + 192460366 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGAGATTTCACC-CACTG-CTCCAG--GAGAGAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 539997 64 + 19675229 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGAGATTTCACC-CACTG-CTCCAG--GAGAGAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479608 64 + 16847902 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CACTG-CTCCAG--GAGAGAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413065 56 - 91754291 --------------------------ACTCCCCA--------ACATAAAGTAGTTCTGAGGGATTTCACC-CACTG-CTCCAG--GAGAGAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570507 64 - 1977891 -----------------CTACCCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CACTG-CTCCAG--GAGAGAGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449899 64 + 7796314 -----------------CTACTCC-AACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCACC-CACTG-CTCCAG--GAGAGAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 929834 65 - 74750902 -----------------CTACCCC-AGCTCGCCA--------ACATACAGCAGTTCTAAGGGATTTCATCTTGTTC-CTCCAG--GAGAGAGGG i calJac3.chr17 I 912 C 0 s saiBol1.JH378146 457888 65 + 17725628 -----------------CTACCCC-AACTCGCCA--------ACGTATAGTAGTTCTGAGGGATTTCATCTTATTC-CTCCAG--AAGAGAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421421 66 - 6778120 -----------------CGACCCCAAACTCGCCA--------ACACAGAGTAGTTCTGAGGGATTTCTCCTTATTC-CTCCAG--GAGACAGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 65888 65 - 69927 -----------------CTACCCC-AACTCGCCA--------GCATAGAGTAGTTCTGAGGGATTTCACCGTATTC-CTCCAG--GAGAGAGGG i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7414770 65 + 22200726 -----------------CTACCCT-GACTCCTTA--------ACATATAGTAGTCCTGAGGGATTTTGCCTTGTTG-CCCCAG--GAGGGAGGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 411183 66 - 608964 -----------------CCACCCT-GGC-CCTTA--------ACACACAGTAGTGCTGAGGGATTTCACCTTGTTG-GCTTGGGAGAGGAAGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65427730 64 - 98207768 -----------------CCACTGC-AGCTACCCA--------ATGCACAGTAGTT-GGAGTGACTTCACTTTACTG-CTCCAA--AAGGCAGGA i mm10.chr16 I 5 C 0 s canFam3.chr33 29065725 70 + 31377067 --------------------CCCT-AACGCCCTACCACACATACACAAAGTAGTT-TGGAGGATTTCACATTGTTGCCCCCAG--GAGGGAGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889551 68 + 6579706 CTATTCAAACACCGCCCCCCCCAC-AACTCCCAC--------ACACACAGTGGTTTTAAGGACTTTGA---TGTTG-C-------GAG------ i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25897953 1544 - 114275543 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=2189989.000000 s hg38.chr3_KI270779v1_alt 120545 181 + 205312 GGCTTAGCCTGGATTCTGGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTCCTGTTGTGTTTGGG--GCGGCCCCTGCCCTGTTCTCTGCCCTA-TACAGAAAATAGGA-----CGTGTTATTCCTTTGTTTCTCT----------------------------GACAAGCTTGCCAACTTAT-----TCCTGTTCCAGGaaaaccgg----gg s panTro5.chr3 200104130 181 + 202621043 GGCTTAGCCTGGATTCTGGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTTCTGTTGTGTTTGGG--GCAGCCCCTGCCCTGTTCTCTGCCCTA-TACAGAAAATAGGA-----CGTGTTATTCCTTTGTTTCTCT----------------------------GACAAGCTTGCCAACTTAT-----TCCTGTTCCGGGagaaccgg----gg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48675 181 + 106623 GGCTTAGCCTGGATTCTGGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTTCTGTTGTGTTTGGGGTGTGGCCACTGCC-------CTGCCCTA-TATAGAAAATAGGATGCGTTGCGTTATTCCTTTGTTTCTCT----------------------------GACAAGCTTGCCAACTTAT-----TCCTGTTCCGGGagaaccgg----gg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857409 176 + 123690457 GGCTTAGCCTGGATTCTGGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTTCTGTTGTGTTTGGGGTGTGGCCACTGCC-------CTGCCCTA-TACAGAAAATAGGA-----TGCGTTATTCCTTTGTTTCTCT----------------------------GCCAAGCTTGCCAACTTAT-----TCCTGTTCTGGAagaaacag----gg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457289 181 + 204787373 GGCTTAGCCTGCATTCTAGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGGA-----TGTGTTATTCGTTTGTTACTCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCAGGagaaccag----gg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64536 181 + 192460366 GGCTTAGCCTGCATTCTAGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGGA-----TGTGTTATTCGTTTGTTACTCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCAGGagaaccag----gg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540061 181 + 19675229 GGCTTAGCCTGCATTCTAGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGGA-----TGTGTTATTCGTTTGTTACTCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCAGGagaaccag----gg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479672 181 + 16847902 GGCTTAGCCTGCATTCTAGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-GACAGAAAATAGGA-----TGTATTACTCCTTTGTTACTCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCGGGagaaccag----gg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413121 181 - 91754291 GGCTTAGCCTGCATTCTAGGAGAAG--CTCTTGCTTGGTCCCAGAACCAAGTAAAACAGCACTTTCTGTTGTGTTTGAG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGGA-----TGTGTTATTCCTTTGTTACTCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCAGGagaaccag----gg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570571 181 - 1977891 GGCTTAGCCTGCATTCTAGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-GACAGAAAATAGGA-----TGTGTTACTCCTTTGTTACTCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCGGGagaaccag----gg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 449963 181 + 7796314 GGCTTAGCCAGGGTTCTAGGAGAAG--CTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCCGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGGA-----TGTGTTATTCCTTTGTTACCCT----------------------------GACAAGCTTGCCAACTTAT-----ACCTGTTCCGGGagaagcag----gg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 929899 185 - 74750902 GGCTTAACCTGGATTCTAGAAGAAG--CTCTTGCTTGCTCCTGGACCCGAGTAAAACAGCAGTTTCTGTTGTGTTTGGG--ATGGCCGCTGCTCTATTCTCTGCCCCA-TCCAGAAAATAGGG-----TGCGTTATTCTTTTCTTTCTCT----------------------------GACAAGCTTGCCAACTCAT-----TCCTGTTCTGGGAGAACAGGGGCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 457953 167 + 17725628 GGCTTAACCTGGATTCTAGAAGAAG--CTCTT------------------GTCAAACAGCAGTTTCTGTTGTGTTTGGG--ATGGCCACTGCTCTGTTCTCTGCCCCA-TCCAGAAAATAAGG-----TGCGTTATTCTTTTCTTTCTCT----------------------------GACAAGCTCGCCAACTTAT-----CCCTGTTCCCGGAGAACAGGGGCtgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421487 185 - 6778120 GGCTTAACCTGGATTCTAGAAGAAG--CTCTTGCTTGCTCCTGGACCCGAGTCAAACGGCAGTTTCTGTTATGTTTGGG--ATGGCCACTCCTCTATTCTCTGCCCCA-TCCAGAAAATAGGG-----TGCGTTATTCTTTTCCTTCTCT----------------------------GACAAGCTTGCCAACTTCT-----TCCTGTTCCGGGAGAACAGGGGCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 65953 184 - 69927 GGCTTGACCTGGATTCTAGAAGAAG--CTCTGGCTTGCTCCTGGACCCGAGTAAAACAGCAGTTTCTGTTGTG-TTGGG--ACGGCCACTGCTCTGTTCTCTGCCCCA-TCCAGAAAACAGGG-----TGCATTATTCTTTTCTTTCTCT----------------------------GACAAGCTTGCCAACTTAT-----TCCTGTTCCGGGAGAACAGGGGCTGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25899497 187 - 114275543 GGCTTAACCTGGATTCTAGGGGAAGCTCTCTTGCTTGGTTCTGGACCGTAGTGAAACAGCAGTTTCTGTTGTGTTCAGA--CTGGTCACTACCCTATTCTTTGCCCTGTTCCAGAAAATAGGG-----TGGGTTAGTCCTTTCTGTCTCT----------------------------GGCAAGCTTGCCAACTTAT--CACTCCTGTTCCAGGagaaccag----gg i micMur3.chr1 I 1544 C 0 s proCoq1.NW_012133858v1 7414835 185 + 22200726 GGCTTAATCTGGATTCTAGGAGAAG--CTCTTGCTTGGTTCTGGATCCAAGTACAACAGCAGTTTCTGTTGTGTTCAGA--CTGGTCACTACCCTATTCTTTGCCCCGTTCCAGAAAATAGGG-----TGGGTTAGTCCTTTCTGTCTCT----------------------------GGCAAGCTTGCCAACTCAT--CATTCCTGTTCCAGGagaaccag----gg i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 411249 210 - 608964 GGCTTAACCTGGATTCTAGGAGAAT--CTCTTGCTTGGTCCTGGACCCAAGTAAAACAGCAGTTTCTGCTGTGTTCAGA--ATGGTCACTATCCTATTCTCTGCCCCATTCCAGAAAATA--------TGGTTCATTCTTTTCTTTCTTTTTTCTTTCTTTCAGCTAGTTAATTGGTAGCCAAGCTTGCCAATTTAT--CATTCCTATTCCAGGAGAACCAG----AG i otoGar3.GL873829 C 0 I 706 s mm10.chr16 65427794 168 - 98207768 AACATAAACTGGTTTCTAGAAGCCG--CTCTCATCAGGTGCTAGACCCAAGTTGAATAGCAGTTTCTCCCAAGTTGGGC--ATAGTCCCTACCCTATTCTCTGCTCCATTTCAGAAGCTAGGGAG---GGGGCTGTTCCTCTGTCTCCCT----------------------------TGC---------------T-----CCCTG-CCCAGGAGAACCAG----AG i mm10.chr16 C 0 C 0 s canFam3.chr33 29065795 155 + 31377067 GGCACTGCCTGGATTC------AAT--CCCAC-------------CCTCAGTGACACAGCGGCTTCCGCAGGGTTTGGT--GTGGTCACTGCCTCACT------CCTA-------GGATAGGG-----TGGTCTATTCCTTTCCTCCTCT----------------------------GGCAAGCTTACCAACTGATCCCATTCTTGTTTCGGGGTaatcag----gg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889619 165 + 6579706 GGCTTCACCAGGATTCTAG---AAG--C-CTTTTCTGGTCCTGGTCTGAAGTAAAACAGCAGCTTCTGCTGTGTTTAGA--ACAGTTGCTGCCTTGTTCTCTGCCCCATTCCGGAAAATAAAG-----TTGGTTCTTTCTTTTTCTCCTT----------------------------GGTAAGGTTGCCAATTTGa------------------gcatcag----gg i dasNov3.JH569502 C 0 C 0 e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=325364.000000 s hg38.chr3_KI270779v1_alt 120726 26 + 205312 gctgtcagcactgaaagggggctcag s panTro5.chr3 200104311 26 + 202621043 gctgtcagcactgaaagggggctcag i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48856 26 + 106623 gctgtcagcactgaaagggggctcag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857585 26 + 123690457 gctgtcagcactgaaagggggctcag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457470 26 + 204787373 gctgtcagcactgaaagggggctcag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64717 26 + 192460366 gctgtcagcactgaaagggggctcag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540242 26 + 19675229 gctgtcagcactgaaagggggctcag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479853 26 + 16847902 gctgtcagcactgaaagggggctcag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413302 26 - 91754291 gctgtcagcacggaaagggggctcag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570752 26 - 1977891 gctgtcagcactgaaagggggctcag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450144 26 + 7796314 gctgtcagcactgaaagggggctcag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930084 26 - 74750902 GCTGTCAGCACTGAAACGGGGCTCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458120 26 + 17725628 actgtcagcactgaaaggcggctccg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421672 26 - 6778120 GCCgtcagcgctgaaaggcggctcag i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66137 26 - 69927 GCtgtcagcactgaaagggggctcag i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25899684 26 - 114275543 gctgtcagacctaaaaggggcttcgg i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7415020 26 + 22200726 gctgtcagagctaagaggggcctcag i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65427962 8 - 98207768 GCTGCCA------------------G i mm10.chr16 C 0 C 0 s canFam3.chr33 29065950 26 + 31377067 atcatcacagctgacggggacctcag i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3889784 26 + 6579706 attgtcagaactgaaagggacctcag i dasNov3.JH569502 C 0 M 400 e otoGar3.GL873829 411459 706 - 608964 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=328385.000000 s hg38.chr3_KI270779v1_alt 120752 30 + 205312 aaatcccatctcatttt-cagatgggggtgc s panTro5.chr3 200104337 30 + 202621043 aaatcccatctcatttt-cagatgggggtgc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 48882 30 + 106623 aaatcccatctcatttt-cagatgggggtgc i gorGor5.CYUI01000576v1 C 0 I 151 s nomLeu3.chr11 120857611 30 + 123690457 aaatcccatctcatttt-cagatgggggtgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457496 30 + 204787373 aaatctcatctcatttt-cagatgggggtgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64743 30 + 192460366 aaatctcatctcatttt-cagatgggggtgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540268 30 + 19675229 aaatttcatctcatttt-cagatgggggtgc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479879 30 + 16847902 aaatcccatctcatttt-cagatgggggtgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413328 30 - 91754291 aaatcccatctcatttt-cagatgggggtgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570778 30 - 1977891 aaatcccatctcatttt-cagatgggggtgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450170 30 + 7796314 aaatcccatctcatttt-cagatgggggtgc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930110 29 - 74750902 AAATCCCACCTCATTTT-CAGGTGGGGGTG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458146 29 + 17725628 aaatcccacctcatttt-cagcaggggtac- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421698 29 - 6778120 aaaccccacctcatttt-caggtggggtac- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66163 29 - 69927 aaatcccaccttatttt-caggtcggggta- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25899710 30 - 114275543 aaatcctgtctcgtttt-tagatggggatgt i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7415046 30 + 22200726 aaatcctgtctcatttt-cagacgggggtgt i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65427970 30 - 98207768 AAACCCCATCCCATTTT-CCCATTGGGACCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29065976 31 + 31377067 aaatcccatctatttttccacatgggggtgt i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 411459 706 - 608964 I e dasNov3.JH569502 3889810 400 + 6579706 M e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=37893.000000 s hg38.chr3_KI270779v1_alt 120782 3 + 205312 tga s panTro5.chr3 200104367 3 + 202621043 tga i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49063 3 + 106623 TGA i gorGor5.CYUI01000576v1 I 151 C 0 s nomLeu3.chr11 120857641 3 + 123690457 tga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457526 3 + 204787373 tga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64773 3 + 192460366 tga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540298 3 + 19675229 tga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479909 3 + 16847902 tga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413358 3 - 91754291 tga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570808 3 - 1977891 tga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450200 3 + 7796314 tga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930139 3 - 74750902 TGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458175 3 + 17725628 tga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421727 3 - 6778120 tga i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66192 3 - 69927 tgg i aotNan1.NW_018503669v1 C 0 I 1 s micMur3.chr1 25899740 3 - 114275543 tga i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7415076 3 + 22200726 tga i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65428000 3 - 98207768 TGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29066007 3 + 31377067 caa i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 411459 706 - 608964 I e dasNov3.JH569502 3889810 400 + 6579706 M e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I a score=136955.000000 s hg38.chr3_KI270779v1_alt 120785 11 + 205312 ggcctggcctg- s panTro5.chr3 200104370 11 + 202621043 ggcctggcctg- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49066 11 + 106623 GGCCTGGCCTG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857644 11 + 123690457 ggcctggCCTG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457529 11 + 204787373 ggcctggcctg- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64776 11 + 192460366 ggcctggCCTG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540301 11 + 19675229 ggcctggcctg- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479912 11 + 16847902 ggcctggcctg- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413361 11 - 91754291 ggcctggCCTG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570811 11 - 1977891 ggcctggcctg- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450203 11 + 7796314 ggcctggCCTG- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 458178 11 + 17725628 ggcctggcctg- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421730 11 - 6778120 ggcctggCCTG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66196 11 - 69927 ggcctggcctg- i aotNan1.NW_018503669v1 I 1 C 0 s micMur3.chr1 25899743 11 - 114275543 ggcctggcctg- i micMur3.chr1 C 0 I 46 s proCoq1.NW_012133858v1 7415079 11 + 22200726 ggcctggcctg- i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65428003 11 - 98207768 GTTCTGGCTTG- i mm10.chr16 C 0 C 0 s canFam3.chr33 29066010 11 + 31377067 -gccttggatgg i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 411459 706 - 608964 I e dasNov3.JH569502 3889810 400 + 6579706 M e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C a score=11504.000000 s hg38.chr3_KI270779v1_alt 120796 1 + 205312 g s panTro5.chr3 200104381 1 + 202621043 g i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49077 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857655 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457540 1 + 204787373 g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64787 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540312 1 + 19675229 g i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479923 1 + 16847902 g i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413372 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570822 1 - 1977891 g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450214 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 458189 1 + 17725628 g i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421741 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66207 1 - 69927 g i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7415090 1 + 22200726 g i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65428014 1 - 98207768 A i mm10.chr16 C 0 C 0 s canFam3.chr33 29066021 1 + 31377067 g i canFam3.chr33 C 0 C 0 e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e dasNov3.JH569502 3889810 400 + 6579706 M e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C a score=48596.000000 s hg38.chr3_KI270779v1_alt 120797 7 + 205312 ggaaggt s panTro5.chr3 200104382 7 + 202621043 ggaaggt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49078 7 + 106623 GGAAGGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857656 7 + 123690457 GGGAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457541 7 + 204787373 ggaagGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64788 7 + 192460366 GGAAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540313 7 + 19675229 ggaagGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479924 7 + 16847902 ggaagGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413373 7 - 91754291 GGAAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570823 7 - 1977891 ggaagGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450215 7 + 7796314 GGAAGGT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 421742 7 - 6778120 GGAGGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66208 7 - 69927 ggaaggt i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7415091 7 + 22200726 ggactgt i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65428015 7 - 98207768 GTTGGGC i mm10.chr16 C 0 I 387 s canFam3.chr33 29066022 3 + 31377067 gga---- i canFam3.chr33 C 0 C 0 e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e dasNov3.JH569502 3889810 400 + 6579706 M e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=16497.000000 s hg38.chr3_KI270779v1_alt 120804 2 + 205312 gc s panTro5.chr3 200104389 2 + 202621043 gc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49085 2 + 106623 GC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857663 2 + 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457548 2 + 204787373 GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64795 2 + 192460366 GC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540320 2 + 19675229 GT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479931 2 + 16847902 GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413380 2 - 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570830 2 - 1977891 GC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450222 2 + 7796314 GC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 421749 2 - 6778120 GC i cebCap1.NW_016107444v1 C 0 I 18 s aotNan1.NW_018503669v1 66215 2 - 69927 gc i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7415098 2 + 22200726 gc i proCoq1.NW_012133858v1 C 0 C 0 e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066025 0 + 31377067 C e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=15378.000000 s hg38.chr3_KI270779v1_alt 120806 3 + 205312 ttg s panTro5.chr3 200104391 3 + 202621043 ttg i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49087 3 + 106623 TTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857665 3 + 123690457 TGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457550 3 + 204787373 TCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64797 3 + 192460366 TCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540322 3 + 19675229 TCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479933 3 + 16847902 TCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413382 3 - 91754291 TCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570832 3 - 1977891 TCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450224 3 + 7796314 TCG i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018503669v1 66217 3 - 69927 ttg i aotNan1.NW_018503669v1 C 0 I 15 s proCoq1.NW_012133858v1 7415100 3 + 22200726 ttg i proCoq1.NW_012133858v1 C 0 I 33 e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066025 0 + 31377067 C e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=5500.000000 s hg38.chr3_KI270779v1_alt 120809 1 + 205312 G s panTro5.chr3 200104394 1 + 202621043 G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49090 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857668 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457553 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64800 1 + 192460366 G i macFas5.chr2 C 0 I 184 s macNem1.NW_012014355v1 540325 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479936 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413385 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 570835 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 I 354 s colAng1.NW_012118932v1 450227 1 + 7796314 G i colAng1.NW_012118932v1 C 0 I 26 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066025 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=9700.000000 s hg38.chr3_KI270779v1_alt 120810 2 + 205312 GG s panTro5.chr3 200104395 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49091 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857669 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457554 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 64985 2 + 192460366 GG i macFas5.chr2 I 184 C 0 s macNem1.NW_012014355v1 540326 2 + 19675229 GG i macNem1.NW_012014355v1 C 0 I 78 s cerAty1.NW_012004056v1 479937 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413386 1 - 91754291 -G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571190 2 - 1977891 GG i manLeu1.NW_012102020v1 I 354 C 0 s colAng1.NW_012118932v1 450254 2 + 7796314 gg i colAng1.NW_012118932v1 I 26 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066025 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=745.000000 s hg38.chr3_KI270779v1_alt 120812 1 + 205312 A s gorGor5.CYUI01000576v1 49093 1 + 106623 A i gorGor5.CYUI01000576v1 C 0 I 38 s nomLeu3.chr11 120857671 1 + 123690457 G i nomLeu3.chr11 C 0 I 78 s rheMac8.chr2 202457556 1 + 204787373 G i rheMac8.chr2 C 0 I 151 s macFas5.chr2 64987 1 + 192460366 A i macFas5.chr2 C 0 I 24 s chlSab2.chr15 413387 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571192 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450256 1 + 7796314 a i colAng1.NW_012118932v1 C 0 I 12 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066025 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e macNem1.NW_012014355v1 540328 78 + 19675229 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C e cerAty1.NW_012004056v1 479939 0 + 16847902 C e panTro5.chr3 200104397 0 + 202621043 C a score=45579.000000 s hg38.chr3_KI270779v1_alt 120813 17 + 205312 GTGTTG-------------------------------------------------AGGCCTGGCCT s panTro5.chr3 200104397 17 + 202621043 GTGTTG-------------------------------------------------AGGCCTGGCCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49132 17 + 106623 GTGTTG-------------------------------------------------AGGCCTGGCCT i gorGor5.CYUI01000576v1 I 38 C 0 s nomLeu3.chr11 120857750 17 + 123690457 GTGTTG-------------------------------------------------AGGCCTGGCCT i nomLeu3.chr11 I 78 C 0 s rheMac8.chr2 202457708 16 + 204787373 GTGTTG-------------------------------------------------AGGCCTCGCC- i rheMac8.chr2 I 151 I 1 s macFas5.chr2 65012 66 + 192460366 GTGCTGGGGGGTGTTGAGGCCTGGCCTGGCCTGGGGAAGGTGCTGGGGGGTGTTGAGGCCTGGCCT i macFas5.chr2 I 24 I 5 s macNem1.NW_012014355v1 540406 17 + 19675229 GTGTTG-------------------------------------------------AGGCCTGGCCT i macNem1.NW_012014355v1 I 78 I 5 s cerAty1.NW_012004056v1 479939 17 + 16847902 GTGCTG-------------------------------------------------AGGCCTGGCCT i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 413388 12 - 91754291 GTGCTG-------------------------------------------------AGGCCT----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571193 17 - 1977891 GTGTTG-------------------------------------------------AGGCCTGGCCT i manLeu1.NW_012102020v1 C 0 I 399 s colAng1.NW_012118932v1 450269 17 + 7796314 gtgctg-------------------------------------------------aggcctggcct i colAng1.NW_012118932v1 I 12 I 5 s canFam3.chr33 29066025 6 + 31377067 ------------------------------------------------------------tggctt i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=-3743.000000 s hg38.chr3_KI270779v1_alt 120830 1 + 205312 -C s panTro5.chr3 200104414 1 + 202621043 -G i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49149 1 + 106623 -G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857767 1 + 123690457 -G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457725 1 + 204787373 -G i rheMac8.chr2 I 1 C 0 s macFas5.chr2 65083 1 + 192460366 -G i macFas5.chr2 I 5 C 0 s macNem1.NW_012014355v1 540428 1 + 19675229 -G i macNem1.NW_012014355v1 I 5 C 0 s cerAty1.NW_012004056v1 479961 1 + 16847902 -G i cerAty1.NW_012004056v1 I 5 C 0 s manLeu1.NW_012102020v1 571609 1 - 1977891 -T i manLeu1.NW_012102020v1 I 399 C 0 s colAng1.NW_012118932v1 450291 1 + 7796314 -g i colAng1.NW_012118932v1 I 5 C 0 s canFam3.chr33 29066031 1 + 31377067 c- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C e chlSab2.chr15 413400 0 - 91754291 C a score=82194.000000 s hg38.chr3_KI270779v1_alt 120831 25 + 205312 GGGGAGGTGC-TGGGGGGTGTTGAGG s panTro5.chr3 200104415 26 + 202621043 GGGAAGGTGCTTGGGGAGTGTTGAGG i panTro5.chr3 C 0 I 5546 s gorGor5.CYUI01000576v1 49150 25 + 106623 GGGAAGGTGC-TTGAGGGTGTTGAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857768 25 + 123690457 GGGAAGGTGC-TGGGGGGTGTTGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457726 25 + 204787373 GGGAAGGTGC-TGAGGAGCGTTGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65084 25 + 192460366 GGGAAGGTGC-TTAGGGGTGTTGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540429 25 + 19675229 GGGAAGGTGC-TTGGGGGTGTTGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479962 25 + 16847902 GGGAAGGTGC-TCGGGGGTGCTGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413400 2 - 91754291 ------------------------GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571610 25 - 1977891 GGGAAGGTGC-TGGGGGGTGTTGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450292 25 + 7796314 gGGAAGGTGC-TTGGGGGTGTTGAGG i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=100027.000000 s hg38.chr3_KI270779v1_alt 120856 21 + 205312 CCTGGCCTGGGGAAGGTGCTG s panTro5.chr3 200109987 21 + 202621043 CCTGGCCTGGGGAAGGTGCTG i panTro5.chr3 I 5546 C 0 s gorGor5.CYUI01000576v1 49175 20 + 106623 CTTGGCCTGGGGAAGGTGCT- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120857793 21 + 123690457 CCTGGCCTGGGGAAGGTGCTG i nomLeu3.chr11 C 0 I 292 s rheMac8.chr2 202457751 21 + 204787373 CCTGGCCTGGGGAAGGTGCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65109 21 + 192460366 CCTGGCCTGGGGAAGGTGCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540454 21 + 19675229 CCTGGCCTGGGGAAGGTGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 479987 21 + 16847902 CCTGGCCTGGGGAAGGTGCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413402 21 - 91754291 CCTGGCCTGGGGAAGGTGCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571635 21 - 1977891 CCTGGCCTGGGGAAGGTGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450317 21 + 7796314 CCTGGCCTGGGGAAGGTGGTG i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=146695.000000 s hg38.chr3_KI270779v1_alt 120877 28 + 205312 GGGGGTGTTGAGGCCTGGCCTGGCCTGG s panTro5.chr3 200110008 28 + 202621043 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i panTro5.chr3 C 0 I 34 s gorGor5.CYUI01000576v1 49195 28 + 106623 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858106 28 + 123690457 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i nomLeu3.chr11 I 292 I 34 s rheMac8.chr2 202457772 28 + 204787373 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65130 28 + 192460366 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i macFas5.chr2 C 0 I 34 s macNem1.NW_012014355v1 540475 28 + 19675229 GGGGGTGTTGAGGCCTGGCCTGGCTTGG i macNem1.NW_012014355v1 C 0 I 175 s cerAty1.NW_012004056v1 480008 28 + 16847902 GGGGGTGCTGAGGCCTGGCCTGGCCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413423 28 - 91754291 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571656 28 - 1977891 GGGGGTGTTGAGGCCTGGCCTGGCCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450338 28 + 7796314 AGGGGTGTTGAggcctggcctggcctgg i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=149280.000000 s hg38.chr3_KI270779v1_alt 120905 32 + 205312 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGCCT s panTro5.chr3 200110070 32 + 202621043 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGCCT i panTro5.chr3 I 34 C 0 s gorGor5.CYUI01000576v1 49223 32 + 106623 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858168 32 + 123690457 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGTCT i nomLeu3.chr11 I 34 C 0 s rheMac8.chr2 202457800 32 + 204787373 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65192 32 + 192460366 GGAAGGTGCTGAGGGGTGTTGA---------------------------------------GGCCTGGCCT i macFas5.chr2 I 34 C 0 s macNem1.NW_012014355v1 540678 32 + 19675229 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGCCT i macNem1.NW_012014355v1 I 175 C 0 s cerAty1.NW_012004056v1 480036 71 + 16847902 GGAAGGTGCTGGGGGGTGTTGAGGCCTCGCCTGGGGAAGGTGCTGAGGAGTATTGAGGCCTGGCCTGGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413451 32 - 91754291 GGAAGGTGCTGGGGAGTGTTGA---------------------------------------GGCCTGGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571684 32 - 1977891 GGAAGGTGCTGGGGGGTGTTGA---------------------------------------GGCCTGGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450366 32 + 7796314 ggaaggtgcttgggggtgttga---------------------------------------ggcctggcct i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e calJac3.chr17 930142 0 - 74750902 C e saiBol1.JH378146 458190 0 + 17725628 C a score=26400.000000 s hg38.chr3_KI270779v1_alt 120937 4 + 205312 GGCC s panTro5.chr3 200110102 4 + 202621043 GGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 49255 4 + 106623 GGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858200 4 + 123690457 GGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457832 4 + 204787373 GGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65224 4 + 192460366 GGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540710 4 + 19675229 GGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480107 4 + 16847902 GGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413483 4 - 91754291 GGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571716 4 - 1977891 GGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450398 4 + 7796314 ggcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930142 4 - 74750902 GGCC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e panPan2.chrUn_NW_014024201v1 81754 3599 + 190779 I e saiBol1.JH378146 458190 0 + 17725628 C a score=22698.000000 s hg38.chr3_KI270779v1_alt 120941 3 + 205312 TGG s panTro5.chr3 200110106 3 + 202621043 TGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85353 3 + 190779 TGG i panPan2.chrUn_NW_014024201v1 I 3599 C 0 s gorGor5.CYUI01000576v1 49259 3 + 106623 TGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858204 3 + 123690457 TGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457836 3 + 204787373 TGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65228 3 + 192460366 TGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540714 3 + 19675229 TGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480111 3 + 16847902 TGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413487 3 - 91754291 TGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571720 3 - 1977891 TGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450402 3 + 7796314 tgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930146 3 - 74750902 TGG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e saiBol1.JH378146 458190 0 + 17725628 C a score=63293.000000 s hg38.chr3_KI270779v1_alt 120944 9 + 205312 GGAAGGTGC s panTro5.chr3 200110109 9 + 202621043 GGAAGGTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85356 9 + 190779 GGAAGGTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49262 9 + 106623 GGAAGGTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858207 9 + 123690457 GGAAGGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457839 9 + 204787373 GGAAGGTGC i rheMac8.chr2 C 0 I 146 s macFas5.chr2 65231 9 + 192460366 GGAAGGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540717 9 + 19675229 GGAAGGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480114 9 + 16847902 GGAAGGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413490 9 - 91754291 GGAAGGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571723 9 - 1977891 GGAAGGTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450405 9 + 7796314 GGAAGGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930149 9 - 74750902 GGAAGGTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458190 9 + 17725628 ggtaagtgc i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I a score=8281.000000 s hg38.chr3_KI270779v1_alt 120953 1 + 205312 T s panTro5.chr3 200110118 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85365 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49271 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858216 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457994 1 + 204787373 T i rheMac8.chr2 I 146 C 0 s macFas5.chr2 65240 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540726 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480123 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413499 1 - 91754291 T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571732 1 - 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450414 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930158 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458199 1 + 17725628 t i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e canFam3.chr33 29066032 0 + 31377067 C e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I a score=185513.000000 s hg38.chr3_KI270779v1_alt 120954 34 + 205312 TGCACAGGGTGACACCATTTCAGGGAGTAGTTGC s panTro5.chr3 200110119 34 + 202621043 TGCACAGGGTGACACCATTTCAGGGAGTAGTTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85366 34 + 190779 TGCACAGGGTGACACCATTTCAGGGAGTAGTTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49272 34 + 106623 TGCACAGGGTGACATCATTTCAGGGAGTAGTTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858217 34 + 123690457 TGCACAGGGTCACATCATTTCAGGGAGTAGTTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202457995 34 + 204787373 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65241 34 + 192460366 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540727 34 + 19675229 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480124 34 + 16847902 TGCACAGGGTCCCATCATTTCTGAGAGGAGTTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413500 34 - 91754291 TGCACAGAGTCCCATCATTTCAGGGAAGAGTTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571733 34 - 1977891 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450415 34 + 7796314 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930159 17 - 74750902 TGCA--------GATCATTTCCGGG--------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458200 17 + 17725628 tgca--------caCCCTTCCCTGG--------- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29066032 31 + 31377067 tgcacagggtcacCC---TTCAAGGAGGGGAAAC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7415103 33 + 22200726 I e micMur3.chr1 25899754 46 - 114275543 I e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I a score=134916.000000 s hg38.chr3_KI270779v1_alt 120988 18 + 205312 CTCTGTCCCTGG--CCAGTC s panTro5.chr3 200110153 18 + 202621043 CTCTGTCCCCAG--CCAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85400 18 + 190779 CTCTGTCCCCAG--CCAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49306 18 + 106623 CTCTGTCCCCGG--CCAGTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858251 18 + 123690457 CTCTGTCCCTGG--CCAGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458029 18 + 204787373 CTCTGTCCCTGG--CCGGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65275 18 + 192460366 CTCTGTCCCTGG--CCAGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540761 18 + 19675229 CTCTGTCTCTGG--CCAGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480158 18 + 16847902 GTCTGTCCCTGG--CCAGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413534 18 - 91754291 CTCTGTCCCTGG--CCAGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571767 12 - 1977891 CTCTGTCCCTGG-------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450449 18 + 7796314 CTCTGTGCCTGG--CCAGTC i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 25899800 18 - 114275543 CTCTGTCCCTGG--CCAGTC i micMur3.chr1 I 46 C 0 s proCoq1.NW_012133858v1 7415136 18 + 22200726 CTCTGCCCCTGG--CCAGTC i proCoq1.NW_012133858v1 I 33 C 0 s canFam3.chr33 29066063 20 + 31377067 CTCTGCCCCTAGGTCAGGTC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e dasNov3.JH569502 3889810 400 + 6579706 M e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e calJac3.chr17 930176 0 - 74750902 C e saiBol1.JH378146 458217 0 + 17725628 C a score=9555.000000 s hg38.chr3_KI270779v1_alt 121006 1 + 205312 T s panTro5.chr3 200110171 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85418 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49324 1 + 106623 T i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858269 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458047 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65293 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540779 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480176 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413552 1 - 91754291 T i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 450467 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s micMur3.chr1 25899818 1 - 114275543 T i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7415154 1 + 22200726 T i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29066083 1 + 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890211 1 + 6579706 T i dasNov3.JH569502 M 400 C 0 e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I e aotNan1.NW_018503669v1 66220 15 - 69927 I e cebCap1.NW_016107444v1 421751 18 - 6778120 I e calJac3.chr17 930176 0 - 74750902 C e saiBol1.JH378146 458217 0 + 17725628 C e manLeu1.NW_012102020v1 571779 0 - 1977891 C a score=584548.000000 s hg38.chr3_KI270779v1_alt 121007 49 + 205312 CCAGTCTCCAGCTTCATATCCTCCCGCTGGAGAGCAGAGACGATGGGGG s panTro5.chr3 200110172 49 + 202621043 CCAGTCTCCAGCTTCATATCCTCCCGCTGGAGGGCAGAGACGATGGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85419 49 + 190779 CCAGTCTTCAGCTTCATATCCTCCCGCTGGAGGGCAGAGACGATGGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49325 49 + 106623 CCAGTCTCCAGCTTCATATCCTCCCGCTGGAGGGCAGAGACGATGGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858270 49 + 123690457 CCAGTCTCCAGCTTCATATCCTCCCGCTAGAGGGCAGAGACGATGGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458048 49 + 204787373 CCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65294 49 + 192460366 CCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540780 49 + 19675229 CCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480177 49 + 16847902 CCAGTCTTCAGGTTAATATCCTGCAGCTGGAGGACATACACGTTGGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413553 49 - 91754291 CCAGTCTCCAGCTTAATATCCTGCAGCTGGAGGACAGACATGATGGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571779 49 - 1977891 CCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450468 49 + 7796314 CCAGTCCCCAGCTTAATATCCTGCAGCTGGAGGACAGACACGATGGGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930176 49 - 74750902 CCAGTCTCCAGCTTCACACCCACCAGCTGGAGGGCAGAGATGACGGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458217 48 + 17725628 CCAGTCTCCAGCTTCATGTCCTCCAGCTGGAGGGCAGAGACGATGGG-A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421769 49 - 6778120 CCAGTCTCTAGCTTCACGTCCTCCAGCTGGGGGGCAGAGACGACGGCGA i cebCap1.NW_016107444v1 I 18 C 0 s aotNan1.NW_018503669v1 66235 49 - 69927 CCAGTCTCCAGCTTCATACCCTCCAGCTGGAGGGCAGAGACGATGGGGA i aotNan1.NW_018503669v1 I 15 C 0 s micMur3.chr1 25899819 48 - 114275543 CCAGCCTTCAGCTTAATATCCTCCAGCTGGAGGGCAAAGACGAGGGAA- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7415155 48 + 22200726 CCAGCCTCCAGCTTAAAATCCTCCAGCTGAAGGGCAAAGGTGAGGGGA- i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29066084 49 + 31377067 CCAGCCTTCAACTGAATTTCCTCCAGCTGGAGGGCAAAGGCAAAAGGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890212 36 + 6579706 CCTGGCTCCAACTTAATATCCTCCAGCTGGAGGGGA------------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 411459 706 - 608964 I e mm10.chr16 65428022 387 - 98207768 I a score=759309.000000 s hg38.chr3_KI270779v1_alt 121056 50 + 205312 TGTCCCTGTGTATGCTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCA s panTro5.chr3 200110221 50 + 202621043 TGTCCCTGTGTATGCTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85468 50 + 190779 TGTCCCTGTGTATGCTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49374 50 + 106623 TGTCCCTGTGTATGCTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858319 50 + 123690457 TGTCGCTGTGTATGTTT---AAATGCAATGGCATTTTAAGAAAACTATTAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458097 50 + 204787373 TGTCCTTGTGTATGTTT---AAGTGCAATGGCATCTTAAGAAAACTATTAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65343 50 + 192460366 TGTCCTTGTGTATGTTT---AAGTGCAATGGCATCTTAAGAAAACTATTAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540829 50 + 19675229 TGTCCTTGTGTATGTTT---AAGTGCAATGGCATCTTAAGAAAACTATTAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480226 50 + 16847902 TGTCCTTGTGTATGTTT---TAGTGCAAAGGCATTTTAAGAAAACTATTAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413602 50 - 91754291 TGTCCTTGTATATGTTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571828 50 - 1977891 TGTCCTTGTGTATGTTT---TAGTGCAAAGGCATCTTAAGAAAACTATTAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450517 50 + 7796314 TGTCCTTGTGTATGTTT---AAGTGCAATGGCATTTTAAGAAAACTACTAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930225 50 - 74750902 TGCCCTTGTGTAGGTTT---AAGTGCAATGGCACTTTCAGAAAACCAGTAGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458265 50 + 17725628 TGCCCTTGTGCCTGTTT---AAGTGCAATGGCACTTTAAGAAAACCAGCAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421818 49 - 6778120 TGCCCTTGTGTATGTTT---AAGTGCAATGGCACTTTAAGAAAA-CAGGAGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66284 50 - 69927 TGCCCTTGTGTATGTTT---AAGTGCAATGGCACTTTAAGAAAACCAGTAGCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25899867 50 - 114275543 TGTCCTTGTATATGTTT---AAGTGCAACAATATTTTAAGAAAACCATTAGCA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7415203 50 + 22200726 CGTCCTTGTGTATATTT---AAGTGCAACAGTATTTTAAGAAAACCATTAGCA i proCoq1.NW_012133858v1 C 0 I 308 s otoGar3.GL873829 412165 50 - 608964 TGCCCTTGTGTATGTTT---AAGTGCAATGATACTTTAAGAAAACCATCAGCA i otoGar3.GL873829 I 706 C 0 s canFam3.chr33 29066133 53 + 31377067 TGTCCTTGTTTATGTTTATAAAGCACAATGGTTTTTTAACAAAATCATTACCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890248 53 + 6579706 TGCCCTTGGTGAGGTTTATAAAGTGCAATAGCATTTTAAGAAAACCATTAGCA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I a score=29944.000000 s hg38.chr3_KI270779v1_alt 121106 2 + 205312 AT s panTro5.chr3 200110271 2 + 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85518 2 + 190779 AT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49424 2 + 106623 AT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858369 2 + 123690457 AT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458147 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65393 2 + 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540879 2 + 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480276 2 + 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413652 2 - 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571878 2 - 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450567 2 + 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930275 2 - 74750902 AT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458315 2 + 17725628 AT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421867 2 - 6778120 AT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66334 2 - 69927 AT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25899917 2 - 114275543 AT i micMur3.chr1 C 0 I 670 s otoGar3.GL873829 412215 2 - 608964 GC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29066186 2 + 31377067 AT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890301 2 + 6579706 AT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415253 308 + 22200726 I e mm10.chr16 65428022 387 - 98207768 I a score=388716.000000 s hg38.chr3_KI270779v1_alt 121108 46 + 205312 TTTAT-----GAAACTAAATTGCTGCTGTTTTATTAGCAGCCACAGTCAGC- s panTro5.chr3 200110273 46 + 202621043 TTTAT-----GAAACTAAATTGCTGCTGTTTTATTAGCAGCCACAGTCAGC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85520 46 + 190779 TTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCAGCCACAGTCAGC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49426 46 + 106623 TTTAT-----GAAACTAAATTGCTGCTGTTTTATTAGCAGCCACAGTCAGC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858371 46 + 123690457 TTTAT-----GAAAATGAATTGCTGCTGTTTGATTAGCAGCCACAGTCAGC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458149 46 + 204787373 GTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65395 46 + 192460366 GTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540881 46 + 19675229 GTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480278 46 + 16847902 GTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413654 46 - 91754291 GTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCAGCCACGGTCAGC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571880 46 - 1977891 GTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450569 46 + 7796314 GTTAT-----GAAAATAAATTGCTGCTGCTTTACTAGCAGCCACAGTCAGC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930277 46 - 74750902 TTTAT-----GAAAACAAATTGCTGCTGTTTCCTGAGCAGCGGCAGTCAGC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458317 46 + 17725628 TTTAT-----GAAAATGAATTGCTGCTGTTTCCTGAGCAGCCGCCATCAGC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421869 42 - 6778120 TTTAT-----GAA----AATTGCTGCCGTTCCGTGGGCAGCCGCGGTCCGC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66336 46 - 69927 TTTGT-----GAAAATAAATTGCTGCTGTTTCGTGAGCAGCCGCAGTCAGC- i aotNan1.NW_018503669v1 C 0 I 14 s otoGar3.GL873829 412217 17 - 608964 AATAT-----TAGGGAGAAATG------------------------------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29066188 40 + 31377067 TTCATCAAAAGAAAGAAAACCG-----------TCAGCAGTGATGGTCAGG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890303 37 + 6579706 TTCAT-----TCAAAGAAAGTCC----------TTAGCGGCAATAGTTTAGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415253 308 + 22200726 I e micMur3.chr1 25899919 670 - 114275543 I e mm10.chr16 65428022 387 - 98207768 I a score=103774.000000 s hg38.chr3_KI270779v1_alt 121154 14 + 205312 AAGGCCCTGGCTGG s panTro5.chr3 200110319 14 + 202621043 AAGGCCCTGGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85566 14 + 190779 AAGGCCCTGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49472 14 + 106623 AAGGCCCTGGCTGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858417 14 + 123690457 AAGGCCCTGGCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458195 14 + 204787373 AAGGCCCTGGCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65441 14 + 192460366 AAGGCCCTGGCTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540927 14 + 19675229 AAGGCCCTGGCTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480324 10 + 16847902 AAGGCCCTGG---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413700 14 - 91754291 AAGGCCCTGGCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571926 14 - 1977891 AAGGTCCTGGCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450615 14 + 7796314 AAGGCCCTGGCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930323 13 - 74750902 AAGGCT-GGGCCGG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 458363 14 + 17725628 AGGGCTGGGGCTGG i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 421911 14 - 6778120 AAGGCTGGGGCTGG i cebCap1.NW_016107444v1 C 0 I 1 s canFam3.chr33 29066228 14 + 31377067 AAGGTGGCAATTAG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3890340 14 + 6579706 AAGACCTCTGTTGG i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 7415253 308 + 22200726 I e micMur3.chr1 25899919 670 - 114275543 I e otoGar3.GL873829 412234 0 - 608964 C e mm10.chr16 65428022 387 - 98207768 I e aotNan1.NW_018503669v1 66382 14 - 69927 I a score=338622.000000 s hg38.chr3_KI270779v1_alt 121168 38 + 205312 GTGCTTGCTCCGT-GAAGCTGTATACGTG---TGACTGCCTC s panTro5.chr3 200110333 38 + 202621043 GTGCTTGCTCCGT-GAAGCTGTATACGTG---TGACTGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85580 38 + 190779 GTGCTTGCTCCAT-GAAGCTGTATACGTG---TGACTGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49486 38 + 106623 GTGCTTGCTCCGT-GAAGCTGTATACGTG---TGACTGCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858431 38 + 123690457 GTACTTGCTCTGT-GAAGCTGTCTGCATG---TGACTGCCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458209 38 + 204787373 GTACTTGCTCTGT-GAAGCTGCATACATG---GGACTGCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65455 38 + 192460366 GTACTTGCTCTGT-GAAGCTGCATACATG---GGACTGCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540941 38 + 19675229 GTACTTGCTCTGT-GAAGCTGCATACATG---GGACTGCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480334 38 + 16847902 GTACTTGCTCTGT-GAAGCTGCATACATG---GGACTGCCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413714 38 - 91754291 GTACTTGCTCTGT-GAAGCTGCATACATG---TGACTGTCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571940 38 - 1977891 GTACTTGCTCTGT-GAAGCTGCATACGTG---GGACTGCCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450629 38 + 7796314 GTACTTGCTCTGT-GAAGCTGTATACATG---TGACTGCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930337 38 - 74750902 GCACTCGCTCTGT-GAAACCGCAGGCACG---TGGCTGCCTT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 458378 39 + 17725628 GTGCTCGCTCCGCGGGAGCCGTATGCACA---TGGCTGCCTC i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 421926 38 - 6778120 GCGCTCGCTCCGT-GAAGCCGGACGCATG---TGGCTGCCTT i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018503669v1 66396 38 - 69927 GGACGGGCTCTGG-GAAGCCGCATGCATC---TGGCTGCCTT i aotNan1.NW_018503669v1 I 14 C 0 s otoGar3.GL873829 412234 30 - 608964 ------GCTCTGC-GAAACTACGT--ATG---TGGATGCCTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29066243 38 + 31377067 GTAATTGGTCTGT-GAAACCATATCCCTG---GGGACTCACC i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3890355 37 + 6579706 GGGATTGCCGGGT-GAAACTACGTACGTGGATTGAGAG---- i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 7415253 308 + 22200726 I e micMur3.chr1 25899919 670 - 114275543 I e mm10.chr16 65428022 387 - 98207768 I a score=1674170.000000 s hg38.chr3_KI270779v1_alt 121206 188 + 205312 AGCAG-TGCTGGCTGCTCCTGCTCTCGAATCTAAAAA--GCAGCTGGACAAAATGTTC-ACGTTTTCGCTCAAAACCAAACAAACAGA-AAAACT---CAATTAGCTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----TGAAG--------CA------------CCTCTGTTTGCCC------------------------------GCCCCCCGC------------AGTGA-CCCCCATAGTGTCCCCGGAATGGACGGACTCACGGGCTGTCA s panTro5.chr3 200110371 188 + 202621043 AGCAG-CGCTGGCTGCTCCTGCTCTTGAATCTAAAAA--GCAGCTGGACAAAATGTTC-ACGTTTTCGCTCAAAACCAAACAAACAGA-AAAACT---CAATTAGCTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----TGAAG--------CA------------CCTCTGTTTACCC------------------------------GCCCCCCGC------------AGTGA-CCCCCATAGTGTCCCCGGAATGGACGGACTCACGGGCTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85618 188 + 190779 AGCAG-CGCTGGCTGCTCCTGCTCTTGAATCTAAAAA--GCAGCTGGACAAAATGTTC-ACGTTTTCGCTCAAAACCAAACAAACAGA-AAAACT---CAATTAGCTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----TGAAG--------CA------------CCTCTGTTTACCC------------------------------GCCACCCGC------------AGTGA-CCCCCATAGTGTCCCCAGAATGGACGGACTCACGGGCTGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49524 188 + 106623 AGCAG-TGCTGGCTGCTCCTGCTCTTGAATCTAAAAA--GCAGCTGGACAAAATGTTC-ACGTTTTCGCTCAAAACCAAACAAACAGA-AAAACT---CAATTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----TGAAG--------CA------------CCTCTGTTTACCC------------------------------GCCACCCGC------------AGTGA-CCCCCATAGTGTCCCCGGAATGGACGGACTCACAGGCTGACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858469 184 + 123690457 AGCAG-CGCTGGCTGCTCCTGCTCCTGAATCTAAAAA--GCAGCTGGATAAAATGTTC-ACGTTTTCGCTCAAAAC----CAAACAGA-AAAACT---CAGTTAGCTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----TGAAG--------CA------------CCTCTGTTTACCC------------------------------GCCCCCCGC------------AGTGA-CCCCCATACTGTCCCCGGAATGGACGGACTCACGGGCTGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458247 188 + 204787373 AGCAG-TGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGA-AAAACT---CAACTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------CA------------CCTCCGTTTACCC------------------------------GCCCCCTGC------------AGTGA-CCCCCACATTGTCCCTGGAATGGATGGACTCACGGGCTGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65493 188 + 192460366 AGCAG-TGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGA-AAAACT---CAACTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------CA------------CCTCCGTTTACCC------------------------------GCCCCCTGC------------AGTGA-CCCCCACATTGTCCCTGGAATGGATGGACTCACGGGCTGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 540979 188 + 19675229 AGCAG-TGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGA-AAAACT---CAACTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------CA------------CCTCCGTTTACCC------------------------------GCCCCCTGC------------AGTGA-CCCCCACATTGTCCCTGGAATGGATGGACTCACGGGCTGTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480372 188 + 16847902 AGCGG-TGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTCCTCTCAAAACCAAGCAAACAGA-AGAACT---CAACTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------CA------------CCTCCGTTTACCC------------------------------GCCCCCTGC------------AGTGA-CCCCCACACTGTCCCCGGAATGGATGGACTCACAGGCTCTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413752 185 - 91754291 AG----TGCTGGGTGCTCCTGCTCTTGAATCTAAACG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGA-AAAACT---CAACTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------CA------------CCTCCGTTTACCC------------------------------ACCCCCTGC------------AGTGA-CCCCCACACTGTCCCCGGAATGGATGGACTCACGGGCTGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 571978 188 - 1977891 AGCGC-TGCTGGCTGCTCCTGCTCTGGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGA-AAAACT---CAACTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------CA------------CCTCCGTTTACCC------------------------------GCCCCCTGC------------AGTGA-CCCCCACACTGTCCCCGGAATGGATGGACTCACGGGCTCTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450667 189 + 7796314 AGCGG-TGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGA-AAAACT---CAATTAACTTG----------------------------------------------TT------------------------------------------------T---GTGTGGGC-----GGAAG--------GA------------CCTCTGTTTACCC------------------------------ACCCCCTGC------------AGTGACCCCCCACACTGTCCCCGGAATGGATGGACTCACGGGCTGTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930375 181 - 74750902 AGCAG-CACT------TCCTGCTCTTGAATCTAAAAA--GCGGATGGATAAAATGTTC-ACGTTTTCTCTCAGAATCAAACAA--AGA-AAAACT---AAATTAACTTG----------------------------------------------CA------------------------------------------------T---GTGTGGGC-----TGAAG--------CA-----------CCCTCGGTTTACCC------------------------------GCCCCCCCC-----------CAGTCA--CCCCACACTGTCCCCGGGATGGACTGACTCACGGGCCGCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458417 183 + 17725628 AGCAG-CGCTGGGCGCTGCTGCTCTTGAATCTAAAAA--GCAACTGGATAAAATGTTC-GCGTTTTCTCTCAAAACCAAACAA--ACA-AAACCT---AAACTGACGTG----------------------------------------------TA------------------------------------------------T---GCGTGGGC-----TGAGG--------CA-----------CGCTCGGTTC-CCC------------------------------GCCCCCCAC-------------GCTG--TCCCACACTGTCCCCAGT-TGGACTGACTCACGGGCGGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 421964 183 - 6778120 GGCAG-CACTGGGTGCTCCTGCTCCTGAATCCAAAAA--GCAGCTGGATAAAATGTTT-ACGTTTTCTCTCAAAGCCAAACAA--AGA-AAAACT---AAATTAACGTG------------------------------------------------------------------------------------------------T---GTGGGGGC-----TGAAG--------CA-----------CCCTGGGTTCACCC------------------------------GCCCACCGC------------AGTTG--TCCCACACCGTCCCCGGA-TGGACCGACTCACCGGCCGTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66434 186 - 69927 AGCAG-CACCGGGAGCTCCTGCTCTCGAATCTAAAAC--GCGGCTGGATAAAACGTTC-ACGTTTTCTCTCAAAACCAAACAA--AGT-AAAACT---AAATTAACGTG----------------------------------------------TA------------------------------------------------T---GTGTGGGC-----TGAAG--------CA-----------GCCTCGGTTTACCT------------------------------GCCCCCCGA------------AGTTA--TCCCACACTGTCCCCGGGATGGACTGACTCACGGGCCGTCA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 412264 251 - 608964 GGCAG-CATTTTGGGCTTCTGCTCTTGG--TGAAAAG--GCTGATGGGTAAAATATTT-ACATTTTCTCTTAACATTTACAAAACAAAGAAAATG---AAATTAATGTG----------------------------------------------CTTCTTCCTTGTCTGTGGACCTCCATAGAATGCTTTGTCTACTACAAGTGT---GTGTGGCC-----TCAAGATCCTTGACA-------AGTTCCCTCTATCTACCT------------------------------GCCACCCGC-------CTCCCAATTA-TCCTTGTACTTTCCCTGAGA--GAGTAACTCACGAGCTGTCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65428409 234 - 98207768 AGCTA-CATCTTGTGTCCCTGTTCT-GAGTCTAAAAGTAGCTGTTGTGGGAAGTTTTA-AA---TTCATTCAAAGATTTACAGACATC-CAAGCT---AACTTAACCTG----------------------------------------------CT------------------------------------------------TCAGCTGTGGACCTGCTGCACA--------CA------------TTACTTTCTACCAAGGGTTGACATGGCCTGCAGATCTGTCATGGCCCTCTGCTTTTCTCCTCTAACAAA-TCCCTCCATTGTCTCCAAGATAG--TGACTCACGAGCCATCT i mm10.chr16 I 387 C 0 s canFam3.chr33 29066282 158 + 31377067 AGCAA-TGTTTGGTGCT-CTGCTCTTGAGTCTAGAAA--GCTGGTGGGTGAAATGTTTAACGATTTCCCTCAAAAATGATAAAAAAAA---------------------------------------------------------------------------------------------------------------------T----------C-----T--AG--------TC------------CCCCTGTTCACCT------------------------------GCCCCCTTG------------GCTGT-CTCTGTGACTATGGCCAGGA--GAGTGACTCACGAGCCAGCA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3890392 229 + 6579706 AGCAGCCTTTTTGGGCTCCTGCTCCTAAACCTAGAAA--GCTGGTGGGtaaaatattt-aaaatttctttaaaaaattacaagtaata-ataatttaaaaattaaCTTGCATCTTACTTACTTTGGACCTCGATGGAATATTTTTCTGCCGTGGGTT------------------------------------------------T---GTGTGGGC-----TGAAG--------CTCTGGGAAGCTCCCCTCCATCCACCC------------------------------CATCCCTTG------------GCTGA-CTC---------------------TGTACTCACGAGCCTGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415253 308 + 22200726 I e micMur3.chr1 25899919 670 - 114275543 I a score=3353866.000000 s hg38.chr3_KI270779v1_alt 121394 206 + 205312 CATCGCGCACGTCTTCCCCGGAGATGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCTCCGT------------GGAAC---GTGGTATAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTCAATGACCGGGCCCCGAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGGATGGGGCTTCCCGAGGCCGGTGCT s panTro5.chr3 200110559 206 + 202621043 CGTCGCGCACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCTCCGT------------GGAAC---GTGGTATAAGAACGCCTCCACCACCGCGACCAGCAGCTGGTTGTTCAGGAAGTCAATGACGGGGCCCCGAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGGATGGGGCTTCCCGAGGCCGGTACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 85806 206 + 190779 CGTCGCGCACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCTCCGT------------GGAAC---GTGGTATAAGAACGCCTCCACCACCGCGACCAGCAGCTGGTTGTTCAGGAAGTCAATGACGGGGCCCCGAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGGATGGGGCTTCCCGAGGCCGGTACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49712 206 + 106623 CATCGCGTACGTCTTCCTTGGAGATGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCTCCGT------------GGAAC---GTGGTATAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTCAATGACCGGGCCCCGAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGGACAGGGCTTCCCGAGGCCGGTACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858653 206 + 123690457 CGTCGCGCACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTCATTCCTGGGCTTCTCACTCCTCCGT------------GGAAC---ATGGTATAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACAGGGCCCCGAGGGCGGTACTGGAACTCTGAGATGACTACCCAGTGTTGAATGGGGCTTCCCGAGGCCGGTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458435 206 + 204787373 CATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACATGGTTCCTGGACTCCTCCCTCCTCCGT------------GGAAC---CTGGTAGAAGAACGCCTCCACTACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65681 206 + 192460366 CATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCTCCGT------------GGAAC---CTGGTAGAAGAACGCCTCCACTACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541167 206 + 19675229 CATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCTCCGT------------GGAAC---CTGGTAGAAGAACGCCTCCACTACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480560 206 + 16847902 CATCCCACACGTCTTCCCCGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCTCGGT------------GGAAC---CTGGTATAAGAACGCCTCCACCACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCCGGTGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 413937 206 - 91754291 CATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACACCTCACTCCTCCGT------------GGAAC---CTGGTATAAGAACGCCTCCACCACTGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCCTCCAGTGTTGAATGGGGCTTCCCGAGGCCGGTGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572166 206 - 1977891 CATCCCACACGTCTTCCCCGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCTCCGT------------GGAAC---CTGGTATAAGAACGCCTCCACCACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACCGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 450856 206 + 7796314 CATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCACTCCTCCGT------------GGAAC---CTGGTGTAAGAATGCCTCCACCACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCTGAGGTGACCATCCAGTGTTGAATGGGGTTTCCCGAGGCAGGTGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930556 209 - 74750902 CATCGCGCACGTCTTCCCTGGAGAGGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCTCCGG------------GGAACATGCTGGTGTAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTGGATGACAGGGCCCCAAGGGCGGTACTGGAACTGCGACATGACCGTCCAGTATTGCATGGGGCTTCCTGAGGCTGGTGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458600 209 + 17725628 CGTCGCTCACGTCTTCCCTGGAGAGGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCTGCGC------------GGGACGCGCTGGTGTAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTCGTTCAGGAAGTGGATGACAGGGCCCCCAGGGCGGTACTGGAACTGCGACGTGACCGTCCAGTATCGAACGGGGCTTCCCGAGGCCGGTGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 422147 209 - 6778120 CATCACGCACGTCTTCCCTGGAGAGGGGCTGGAAGACCACGTCGCTCCTGGGCTCCTCACGCCTCTGT------------GGAACCTGCCGGTGTAAGAACGCCTCCACCACGGCGGCCAGCAGCTGGTTGTTCAGGAAGTGGATGACAGGGCCCCCAGGGCGGTACTGGAACTGCGAGGTGACCGTCCAGTATTGAACGGGGCTTTCTGAGGCCGGTGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66620 209 - 69927 CATCGCGCACGTCTTCCCTGGAGAGGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCGCTCCTCCGT------------GGGACGCGCTGGTGTAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTGGATGACAGGGCCCCGAGGGCGGTACTGGAAGCGCGACGTGACCGTCCAGTATTGAGCGGGGCTTCCTGAGGCCGGGGCT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25900589 218 - 114275543 CATCACGCACGTCTTCTCTGGAGATGGGGTGGAAGACCACATTGTTCCTGGACCCCTCACTCCTCTTTGACCTCCTGGCCGGCAC---CTGGTGTAAGAATGCCTCCACCACTGCGCCCAGCAGCTGGTTGTTCAAGAAGTGAATGACAGGGCCCCAGGGGCGGTACTGGAACTCTGAGATGACCTTCCAGTGTTGAGTGGAGCTTCCTGAGGCTGGTGCT i micMur3.chr1 I 670 I 81 s proCoq1.NW_012133858v1 7415561 218 + 22200726 CATCACGCACGTCTTCCCTGGAGATGGGGTGGAAGACCACGTTGTTCCTGGACCCCTCACTCCTCTTCCACCTCCTGGTCGGCAC---CTGGGGTAAGAACACCTCCACCACCGCGTCCAGGAGCTGGTTATTTAGGAAGTGGATGACAGGGCCCCAAGGGCGGTACTGGAACTTTGAGATGACCTTCCAGTGTTGAGTGGAGCTTCCCGAGGCTGGTGCT i proCoq1.NW_012133858v1 I 308 C 0 s otoGar3.GL873829 412515 218 - 608964 CATCGTGCACATTTTCCTTGGAGATAGGGTAGAAGACCACGTTGTTTCTGGGCTCCTCGCTCCTCTTCGACCTTCTCCTGGGAAC---CCGCCGTAAGAAAGCCTCCACTACTGCATCCAGCAGCTGGTTATTCAGGAAGTTGATGACAGGCCCCCTAGGACGGTACTGGAACTTTGATATGACAATCCAACGATGAATGGAGTTTCCCAAGGCTGGTGCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65428643 218 - 98207768 GGTCCTGGACATCTGCCCTCGAGATGGGGAAGAAGTGGACGTCCTTCCTGGCTTCTCCACTCCTCTTCTGCCTCTCCTGCCGAGC---CTGCAGGAGGAAGGCCTCCATCACGGCGCCTATCAGCTGGTTGTTCAGATAGTGGATGAGCGGGCCCCTGGGACGGTACTTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCT i mm10.chr16 C 0 I 1 s canFam3.chr33 29066440 218 + 31377067 CACTGTGCACGTCTTCCCTGGAGATGGAGTGGAAGTTCACGTCGGTCCTGGGCCTCCCACTTCTGTTCTTCCTCCACCACGAGGC---CTGGGGTAAGAACGCTTCCACCACTGCATCCAGCAGCTTGGTGTTCAGGAAGTCGATGACGGGACCCTGAGGAAGGTACTGGAACTTCGAGAAGACTCTCCAGTGTCTACGTAAACTTCCCGAGGCCGGCGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890621 218 + 6579706 CACTGCGCACGTCTCCCATCGAGATGGGGTGGAAGAGCACGTTGTTCCTGGGCCCCTGGCTCCTGCTCCAAGTCCCCTGGGGGCC---CGGGGGTAAGAATGCCTCCACCATAGCGCTCAGCAGCCTGTTGTTCAGGAAGTCGATGACAGGGCCCGAAGGGCGGTACTGGAACTCAGAGATGACTTTCCAGCGTTGAAGGAAACCTCCTGAGGCTGGGGTG i dasNov3.JH569502 C 0 C 0 a score=19000.000000 s hg38.chr3_KI270779v1_alt 121600 1 + 205312 G s panTro5.chr3 200110765 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86012 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49918 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858859 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458641 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65887 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541373 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480766 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414143 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572372 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451062 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930765 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458809 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 422356 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66829 1 - 69927 G i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7415779 1 + 22200726 G i proCoq1.NW_012133858v1 C 0 I 83 s otoGar3.GL873829 412733 1 - 608964 G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29066658 1 + 31377067 G i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3890839 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25900807 81 - 114275543 I e mm10.chr16 65428861 1 - 98207768 I a score=354616.000000 s hg38.chr3_KI270779v1_alt 121601 30 + 205312 CAGAATCGCTGTGTGGG----AGGGCAACGGTGA s panTro5.chr3 200110766 30 + 202621043 CGGAATCGCTGTGTGGG----AGGGCAACGGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86013 30 + 190779 CGGAATCGCTGTGTGGG----AGGGCAACGGTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49919 30 + 106623 TGGAATCGCTGTGTGGG----AGGGCAACGGTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858860 30 + 123690457 GGGAATCGCTGTGTGGG----AGGGCGACAGTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458642 30 + 204787373 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65888 30 + 192460366 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541374 30 + 19675229 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480767 30 + 16847902 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414144 30 - 91754291 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572373 30 - 1977891 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451063 30 + 7796314 GGGAATTGCTGTGTGGG----AGAGTGACAGTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930766 30 - 74750902 GGGAATCGCTGTATGGG----AGGGCAACGGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458810 30 + 17725628 GGGAATCGCTGCACGGG----AGGGCCACGGTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 422357 30 - 6778120 GGGAATCGCTGTGTGGG----AGGGTGACGGTGA i cebCap1.NW_016107444v1 C 0 I 14 s aotNan1.NW_018503669v1 66830 29 - 69927 GGGAATTGCTGTA-GGG----GGGGCGACGGTGA i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 412734 29 - 608964 AAGAGTTGCTGTGTGGGGAGCAGGGGGGC----- i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65428862 29 - 98207768 CGGGAGAGCTGTATGGA----AGGGGTACAGTG- i mm10.chr16 I 1 C 0 s canFam3.chr33 29066662 30 + 31377067 TGGAATTGCTGCGTGGG----AGGGGCACCGTGA i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3890840 33 + 6579706 GGGCAGTGCTGGGGGGG-GGCAGGGAGACAGTGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415780 83 + 22200726 I e micMur3.chr1 25900807 81 - 114275543 I a score=98131.000000 s hg38.chr3_KI270779v1_alt 121631 28 + 205312 -----gggggggtggggggctggggg--------tggggga s panTro5.chr3 200110796 36 + 202621043 -----ggggggctggggggctggggggctgggggtgggggA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86043 28 + 190779 -----GGGGGGCTGGGGGGCTGGGGG--------TGGGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49949 27 + 106623 -----Ggggggct-gggggctggggg--------cggggga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858890 27 + 123690457 ------GGGGGCTGGGGGGCTGGGGG--------TGGGGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458672 21 + 204787373 -----GGGGGGCCAGGGAG---------------CGGGGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65918 21 + 192460366 -----GGGGGGCCAGGGAG---------------CGGGGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541404 21 + 19675229 -----GGGGGGCCAGGGAG---------------CGGGGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480797 21 + 16847902 -----GGGGGGCCAGGGAG---------------CGGGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414174 21 - 91754291 -----GGGGGGCCAGGGAG---------------CGGGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572403 21 - 1977891 -----GGGGGGCCAGAGAG---------------CGGGGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451093 21 + 7796314 -----GGGGGGCCAGGGAG---------------CGGGGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930796 17 - 74750902 -----GGGGGGCTGGGGGC---------------CGG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458840 17 + 17725628 -----GGGGGGCCGGGGGC---------------CGG---- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 66859 17 - 69927 -----GGGGGGCTGGGGGC---------------CGG---- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 412766 21 - 608964 -----GAGGAAGTGAGCAA---------------CATGAGA i otoGar3.GL873829 I 3 C 0 s mm10.chr16 65428891 21 - 98207768 -----GGGGGTTTGAGGAG---------------CAGGAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29066692 20 + 31377067 ------GGTGGTAAGGGTG---------------CAGGTGG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3890873 31 + 6579706 GAGGCTGAGGGTTGCGGGGCTGCGG---------Tagggg- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415780 83 + 22200726 I e micMur3.chr1 25900807 81 - 114275543 I e cebCap1.NW_016107444v1 422387 14 - 6778120 I a score=290687.000000 s hg38.chr3_KI270779v1_alt 121659 30 + 205312 tgaggaaga-gatctggggg----ctTA-GGGGGAC s panTro5.chr3 200110832 30 + 202621043 TGAGGAAGA-GATCTGGGGG----CTCA-GGGGGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86071 30 + 190779 TGAGGAAGA-GATCTGGGGG----CTCA-GGGGGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 49976 30 + 106623 tgaggaaga-gatctggggg----ctCA-GGGGGAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858917 31 + 123690457 TGAGGAAGAGGATCTGGGGG----CTCA-GGGAGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458693 31 + 204787373 TGAGGAAGAGGACCTGGGGG----CTCA-GGGGGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65939 31 + 192460366 TGAGGAAGAGGACCTGGGGG----CTCA-GGGGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541425 31 + 19675229 TGAGGAAGAGGACCTGGGGG----CTCA-GGGGGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480818 31 + 16847902 TGAGGAAGAGGACCTGGGGG----CTCA-GGGGGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414195 32 - 91754291 TGAGGAAGAGGACCTGGGGG----CTCAGGGGGGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572424 31 - 1977891 TGAGGAAGAGGACCTGGGGG----CTCA-GGGGGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451114 31 + 7796314 TGAGGAAGAGGACCTGGGGG----CTCA-AGGGGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930813 30 - 74750902 TGAGGAAGAAGACGTGGGGG----CTCA--GGGGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458857 30 + 17725628 TGAGGAAGAAGACCTGGGGG----CTCA--GGGGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 422401 29 - 6778120 TGAGGAAGAAGACCT-GGGG----CTCG--GGGGTC i cebCap1.NW_016107444v1 I 14 C 0 s aotNan1.NW_018503669v1 66876 30 - 69927 TGAGGAAGAAGACCCGGGGG----CTCA--GGGCTC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 412787 31 - 608964 TGGGAAAGAAGACCTGGGGA----CTCA-GGCAGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65428912 25 - 98207768 -GAGGGAGAGG-----GGAG----CCAT-GGGGGAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29066714 25 + 31377067 ---GGGGGA-GACGCGGGGG----CCAA-GGGGG-- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3890904 23 + 6579706 ---------agacccaggggagacccca-gggg--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415780 83 + 22200726 I e micMur3.chr1 25900807 81 - 114275543 I a score=1462096.000000 s hg38.chr3_KI270779v1_alt 121689 84 + 205312 ACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTCTGTATGCCACCTAGG s panTro5.chr3 200110862 84 + 202621043 ACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTCTGTATGCCACCTAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86101 84 + 190779 ACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTCTGTATGCCACCTAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50006 84 + 106623 ACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTCTGTATGCCACCTAGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120858948 84 + 123690457 ACAGTCCCACTTACATTT------GTTTCACTTGGCTGTTGTGGAGAAAGGCCCGCATGTCCAGGGATCCCAGTCTGTATGCCACCTAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458724 84 + 204787373 ACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 65970 84 + 192460366 ACAGTCCCACTTACATTC------GGTTCACCTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541456 84 + 19675229 ACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480849 84 + 16847902 ACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414227 84 - 91754291 ACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTACGCCACCTAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572455 84 - 1977891 ACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTACGCCACCTAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451145 84 + 7796314 ACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930843 84 - 74750902 ACCGTCCCACTTACATTT------GGTTCACTTCGCTGTTGTAGAGAAAGGCCTGCCCGTGCAGGGTCCGCAGTCTGTACGCCACCTAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458887 84 + 17725628 ACCGTCCCACTTACATTC------GGTTCACTTCGCTGTTGTAGAGAAAGGCCCGCACGCGCAGGGTCCGCAGTCTGTATGACACCTAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 422430 84 - 6778120 ACCGTCCCACTTACATTG------GGTTCACTTCGCTGTTGTAGAGAAAGGCCCGCACGTGCAGGGTCCGCAGTCTGTATGCCACCTAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66906 84 - 69927 ACCGTCCCACTTACATTC------GGTTCACTTCGCTGTTGTAGAGAAAGGCCCGCACGTGGAGGGTCCGCAGTCTGTATGCCACCTAGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25900888 84 - 114275543 ACAGTCCCACTTACATTA------GCTCCACTTTGCTGTTCTGGAGAAAGGCCCGCACCGCCAGGGTCCCCAGTCTGTATGCCACCTAGG i micMur3.chr1 I 81 C 0 s proCoq1.NW_012133858v1 7415863 84 + 22200726 ACAGTCCGACTTACATTT------GTTCCACTTTGCTGTTCTGGAGAAAGGCCCGCACCGCCAGGGTCCCCAGTCTGTATGCCACCTAGG i proCoq1.NW_012133858v1 I 83 I 996 s otoGar3.GL873829 412818 84 - 608964 ACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTCTGGAGAAAGGCCCGCACCTCCAGGGTCTCTAGTCTGTACGCCACCTAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65428937 88 - 98207768 --AGCTTCACTTACGTTCGTATCAGTTCCACTAAGCTGTTGGAGAAAAAAGCCCGCATGTCCAGGTTCTCTAGTATGTTCGCCACCTACA i mm10.chr16 C 0 C 0 s canFam3.chr33 29066739 84 + 31377067 ACAGTCCCACTTACATCT------GTAGCACTTCGGAGTTCTGGAGAAAGGCCCGCACATTCAGGTTCCCCAGTCTGTAGGCCACCTAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3890927 84 + 6579706 aCAGCCCCACTTACACCC------GTTCCACCAGGCTGTTCCGGAGAAAGGCCCGCACCTCCAGGGTCCCCAGCCTGTATGCCACCTGGG i dasNov3.JH569502 C 0 C 0 a score=97034.000000 s hg38.chr3_KI270779v1_alt 121773 9 + 205312 TTAGAGGAT s panTro5.chr3 200110946 9 + 202621043 TTAGAGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86185 9 + 190779 TTAGAGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50090 9 + 106623 TCAGAGGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859032 9 + 123690457 CCAGAGGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458808 7 + 204787373 AC--AGGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66054 9 + 192460366 ACAGAGGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541540 9 + 19675229 ACAGAGGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480933 9 + 16847902 ACAGAGGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414311 9 - 91754291 ACAGAGGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572539 9 - 1977891 ACAGAGGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451229 9 + 7796314 ACAGAGGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930927 9 - 74750902 GCAGAGGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 458971 9 + 17725628 GCAGAGGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 422514 9 - 6778120 GCAGGGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 66990 9 - 69927 GCAGAGGAT i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25900972 9 - 114275543 GCAGAGGAT i micMur3.chr1 C 0 I 250 s otoGar3.GL873829 412902 9 - 608964 GCAGAGGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65429025 8 - 98207768 ATGGAGGA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29066823 8 + 31377067 GCA-AGGAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891011 9 + 6579706 GTGGAGGAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I a score=17100.000000 s hg38.chr3_KI270779v1_alt 121782 1 + 205312 G s panTro5.chr3 200110955 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86194 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50099 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859041 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458815 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66063 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541549 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480942 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414320 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572548 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451238 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930936 1 - 74750902 G i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 458980 1 + 17725628 G i saiBol1.JH378146 C 0 I 7 s cebCap1.NW_016107444v1 422523 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 I 15 s aotNan1.NW_018503669v1 66999 1 - 69927 G i aotNan1.NW_018503669v1 C 0 I 1 s otoGar3.GL873829 412911 1 - 608964 G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29066831 1 + 31377067 G i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891020 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25900981 250 - 114275543 I e mm10.chr16 65429033 0 - 98207768 C a score=80033.000000 s hg38.chr3_KI270779v1_alt 121783 11 + 205312 GCAGATGGG--GG s panTro5.chr3 200110956 11 + 202621043 GCGGATGGG--GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86195 11 + 190779 GCGGATGGG--GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50100 11 + 106623 GCGGATGGG--GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859042 11 + 123690457 GGGGATGGG--GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458816 13 + 204787373 GGGGATGGGCGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66064 13 + 192460366 GGGGATGGGCGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541550 13 + 19675229 GGGGATGGGCGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480943 13 + 16847902 AGGGATGGGCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414321 13 - 91754291 GGGGATGGGCGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 572549 13 - 1977891 GGGGATGGGCGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451239 13 + 7796314 GGGGATGGGCGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 930938 11 - 74750902 GGGAATGGG--GG i calJac3.chr17 I 1 I 257 s cebCap1.NW_016107444v1 422539 11 - 6778120 GGCGGTGGG--GG i cebCap1.NW_016107444v1 I 15 C 0 s aotNan1.NW_018503669v1 67001 11 - 69927 GGGAATGGG--GG i aotNan1.NW_018503669v1 I 1 I 21 s otoGar3.GL873829 412912 13 - 608964 AGGGATGGAGTGA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65429033 9 - 98207768 --AGATGGG--GG i mm10.chr16 C 0 I 1 s canFam3.chr33 29066832 10 + 31377067 -GGGGTGGG--GG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3891021 7 + 6579706 ---GAGGGA--G- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25900981 250 - 114275543 I e saiBol1.JH378146 458981 7 + 17725628 I a score=1677483.000000 s hg38.chr3_KI270779v1_alt 121794 218 + 205312 TGGGG--GTG---AGGCCCCATCCGGGGGGGAGACGCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGtattcatcc----ctg-----tttcctcctggaacgggagccc-----------------------------------------------------------------caggac-cc-cagcaccttcctcacctgtctctgcacccttgcactctagcctagctcagtgagtgtcatgggtccttgcttaat-aa-tgtttgtt-gagagtgaaGGGTTTTCCATTCTGT--CCCCC--CCTCAGCCTC s panTro5.chr3 200110967 217 + 202621043 TGGGG--GTG---AGGCCCCATCCAGGGGGT-GACGCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACCTTCCTCACCTGTCTCTGCACCCTTGCACTCTAGCCTAGCTCAGTGAGTGTCACGGGTCCTTGCTTAAT-AA-TGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGT--CCCCG--CCTCGGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86206 217 + 190779 TGGGG--GTG---AGGCCCCATCCAGGGGGT-GACGCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACCTTCCTCACCTGTCTCTGCACCCTTGCACTCTAGCCTAGCTCAGTGAGTGTCACGGGTCCTTGCTTAAT-AA-TGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGT--CCCCG--CCTCGGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50111 217 + 106623 TGGGG--GTG---AGGCCCCATCCAGGGGGGAGACGCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGTATTCAT-C----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACCTTCCTCACCTGTCTCTGCACCCTTGCACTCTAGCCTAGCTCAGTGAGTGTCATGGGTCCTTGCTTAAT-AA-TGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGT--CCCCC--CCTCGGCCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859053 219 + 123690457 TGGGG--GTG---AGGACCCATCCAGGGGGGAGACCCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGCAAGCCC-----------------------------------------------------------------TAGGAC-CC-CAGCACCTTCCTCACCTGTCTCTGCACCCTCACACTCTGGCCTAGCTCAGTGACTGTCATGGGTCCTTGTTTCAT-AA-TGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGT--CCCCC-TCCTTGGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202458829 283 + 204787373 TGGGG--GTG---AGGCCCCATCCAGAGGGGAGATCCCC---------TCCCACCTTGATGGGTGTATTCATCCCTGTTTCCTCCTG----------------------------------------GAACAGGAGCCCCAGGGGAGACCCCCTCCCACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACATTCCTCACC-GTCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AA-CGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGT--CCCCC-TCCTCAGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66077 302 + 192460366 TGGGG--GTG---AGGCCCCATCCAGAGGGGAGATCCCC---------TCCCACCTTG-----------CATCAATA--------CATACACCTTGATGCATGTATTCAT--CCCTGTTTCCTCCTGGAACAGGAGCCCCAGGGGAGACCCCCTCCCACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACATTCCTCACC-GTCTCTGCATCCTCGCACTCGAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AA-TGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGT--CCCCC-TCCTCAGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541563 283 + 19675229 TGGGG--GTG---AGGCCCCATCCAGAGGGGAGATCCCC---------TCC--------------------------------------CACCTTGATGGGTGTATT--CATCCCTGTTTCCTCCTGGAACAGGAGCCCCAGGGGAGACCCCCTCCCACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACATTCCTCACC-GTCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGTGGGTCCTTGCTTAAT-AA-TGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGT--CCCCC-TCCTCAGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 480956 218 + 16847902 TGGGG--GTA---AGGCCCCATCCAGAGGGGAGATCCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGTATTCATCC----CTG-----TTTCCTCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACATTCCTCACC-GTCTCTGCATCCTCCCACTCTAACCTAGCCCAGTGACTATCGCGGGTCCTTGCTTAAT-AA-TGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGT--CCCCC-TCCTCAGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 414334 282 - 91754291 TGGGG--GTG---AGGCCCCATCCAGAGGGGAGACCCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGCATGTATTCATCC----CTG-----TTTCCTCCTGGAACAGGAGCCCCAGGGGAGACCCCCTCCCACCTGGATGGGTGTATCCATCCCTGTTTCCTCCTGGAACGGGAGCCGCAGGAC-CC-CAGCACATTCCTCACC-GTCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AA-TGTGTGTT-GTGAGTGAAGGGTTTTCCGTTCTGT---CCCC-TCCTCAGCCTC i chlSab2.chr15 C 0 I 884 s manLeu1.NW_012102020v1 572562 218 - 1977891 TGGGG--GTG---AGGCCCCATCCAGAGGGGAGATCCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGGGTGTATTCATCC----CTG-----TTTCCCCCTGGAACGGGAGCCC-----------------------------------------------------------------CAGGAC-CC-CAGCACATTCCTCACC-ATCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGCGGGTCCTTACTTAAT-AA-TGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGT--CCCCC-TCCTCAGCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451252 217 + 7796314 TGGGG--GTG---AGGCGCCATCCAGAGGGGAGACCCCC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGCGTGTATTCATCC----CTG-----TTTCCCCGTGGAATGGGAGCCT-----------------------------------------------------------------CAGGAC-CC-CAGCACATTCCTCACC-ATCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCTCCGGTCCTTGCTTAAT-AA-TGTCGGTT-GTAAGTGAC-GGTTTTCCATTCTGT--CGCCC-TCCTCAGACTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 931206 215 - 74750902 TGGGTGGGTG---AGGCCCCATACACAGAGGAGAGCCTC---------TCC---------------------------------------------------------------------------------------------------------CGCCTTGATCCGTTTATTCACCC----CTG-----TTTCCTCCTTGAATGTGAGTCC-----------------------------------------------------------------CAGGAC-CT-GGATACATTTCTCACCTATCTCTGCATCCTCGCCCTCTAGCCTAGTCCAGTGACGGTCACGGGTCCTTGTTTAAT-A----T---TT-GTGAGGGGAGGGTTTTCCATTCTCT--CCCCA-TCCTAGGCCTC i calJac3.chr17 I 257 C 0 s cebCap1.NW_016107444v1 422550 211 - 6778120 TGGGT--GTG---AGGCCCCATCCAGAGAGGAGAGCCTC---------CCC---------------------------------------------------------------------------------------------------------CACCTTGACGCGTTTGTTCATCC----CTG-----TTTCCTCCTTGAATGTGAGTCC-----------------------------------------------------------------CAGGAC-CC-GGACACATGGCTCGCCCAGCTCCGCATCCTCGCCCTCTGGCCTAGTCCAGTGACTGTCACGGGTCC----TTAAT-A----TTTGTT-GTGAGGGAAGCGTTTTCCATTCTCT--CCCC--TCCTAGGCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 67033 202 - 69927 CGGGT--GTG---AGGCCCCATCCAGAGAGGAGAGCCTC---------TCC---------------------------------------------------------------------------------------------------------CACCTTGATGCGTTTATTCATCC----CTG-----TTTCCTCCTTGAATGTGA--------------------------------------------------------------------------------GACACATTCCTCACCCATCTCTGCGTCCTCGCCCTCTAGCCTAGTCCAGTGACTGTCACAGGTCCTCGTTTAAC-G----TTTGTC-GTGAGGGAAGGGTTTTCCATTCTCT--CCCC--TCCTAGGCCTC i aotNan1.NW_018503669v1 I 21 C 0 s otoGar3.GL873829 412926 234 - 608964 GGGTG--GTG---AGACCCAGTCCAGGGAGGAAACCTCCCTAACTCATCCC---------------------------------------------------------------------------------------------------------CCCAAGGATGCATTTATTCATCA----Ttgtctgtttttgcctttgaatgtgaactc-----------------------------------------------------------------caggat-cc-ccagataattctcacccatctctgtatcctcataacctagcctagtccagggactggtgtaggtcctcactgaat-aa-tagttgtt-ggcaaatgaaGGACCAACATAATTT--CCCCCCTCCTCTGCCTC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65429043 171 - 98207768 TGGGA--GGATATAGGCCTAATGAGGATTAGAGAGGTCT---------CTC-------------------------------------------------------------------------------------------------------------------------------C----CAA-----TTTT------GAATGTGGGGCC-----------------------------------------------------------------TAG--------------------ATTGCTCTTTTCATTCCCACACCCAGGCTCAGGTCAGTGACTGACCTGGGTCCTTGCTTAAT-AA--ATATTCA-GTGGGTGAAGAATGTGGCATTCTTC--CCTTC-TGCCATA---- i mm10.chr16 I 1 C 0 s canFam3.chr33 29066844 214 + 31377067 TGGGA--GTG---AGGCCCCACCCGAAGAGGACA-CCTC---------TCC---------------------------------------------------------------------------------------------------------CACTTGCATGTACTTATTTGTCCACATCTG-----GCTCCGTTTTGCACACGAGCAC-----------------------------------------------------------------CAGGAC-CCACAGACTGCTTCTCACC---ATCTGCATCCCCACGCCCCAGCCTAGCCTGGTGGCCCTCGTGGGTCCCTGCTTACTGAA-CATTTGCTGGAGAGTCAAGG-------ACTCTGC--ACACC--TCCCTGCCTC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3891028 215 + 6579706 AGTGG--GTG-----------TCCAGAGGGGAGG--------------CCC---------------------------------------------------------------------------------------------------------CCCTTTAAAGCATTTCTTCATCC----CTGTTTGCTTTCTTCTTTGAACGTGAGCCC-----------------------------------------------------------------CAGGGTGTC-CAGAACGTTTTCCCTC-ATCTCTTCATCCCCACATTCTAGCCTACCCCAGCAACCCGCAGGGATCCCCACTGAAT-GAGTATTTGCTGGTGAGTGAAGGACTTGACTTTCTTTTTCCTCC-TCCTCTGCCTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25900981 250 - 114275543 I e saiBol1.JH378146 458981 7 + 17725628 I a score=31686.000000 s hg38.chr3_KI270779v1_alt 122012 12 + 205312 ATATGACGAGCA s panTro5.chr3 200111184 12 + 202621043 ATATGACGAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86423 12 + 190779 ATATGACGAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50328 12 + 106623 ATATGACGAGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859272 12 + 123690457 ATATGACGAGCG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 931421 12 - 74750902 ATATGACAAGCG i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 422761 12 - 6778120 ATATGACAAGCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 67235 12 - 69927 ACATGACAAGCG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 413160 12 - 608964 ATCTTACAAGAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65429214 12 - 98207768 ATGTTGCCAGGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29067058 12 + 31377067 CCATGACAAGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891243 11 + 6579706 GTGTTACAAAT- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25900981 250 - 114275543 I e macNem1.NW_012014355v1 541846 0 + 19675229 C e saiBol1.JH378146 458981 7 + 17725628 I e colAng1.NW_012118932v1 451469 0 + 7796314 C e manLeu1.NW_012102020v1 572780 0 - 1977891 C e chlSab2.chr15 414616 884 - 91754291 I e cerAty1.NW_012004056v1 481174 0 + 16847902 C e macFas5.chr2 66379 0 + 192460366 C e rheMac8.chr2 202459112 0 + 204787373 C a score=117588.000000 s hg38.chr3_KI270779v1_alt 122024 25 + 205312 GAGAATCTGACATGAATGGCCCCTA s panTro5.chr3 200111196 25 + 202621043 GAGAATCTGACATGAATGGCCCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86435 25 + 190779 GAGAATCTGACATGAATGGCCCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50340 25 + 106623 GAGAATCTGACATGAATGGCCCCTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859284 25 + 123690457 GGGAATCTGACATGAATGGCCCCTA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 931433 25 - 74750902 GAGAATCTGATGTGCATGGCCCCTC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 422773 25 - 6778120 GAGGATCTGACGTGCGTGGCCCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 67247 25 - 69927 GAGGATCTGATGTGCACGGCCCCTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25901231 25 - 114275543 GAGAATCTGACATGAATGGCCCCTA i micMur3.chr1 I 250 I 710 s otoGar3.GL873829 413172 25 - 608964 AAGAATCTGACACAAATGGTCCCTA i otoGar3.GL873829 C 0 M 868 s mm10.chr16 65429226 24 - 98207768 GAACATGTGAGACGAACATCTCTG- i mm10.chr16 C 0 C 0 s canFam3.chr33 29067070 25 + 31377067 GGGAATCTGAAATGAGTGGCCCCTA i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3891254 25 + 6579706 GAGAACCTGAAATGAATGGCCCCGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e macNem1.NW_012014355v1 541846 0 + 19675229 C e saiBol1.JH378146 458981 7 + 17725628 I e colAng1.NW_012118932v1 451469 0 + 7796314 C e manLeu1.NW_012102020v1 572780 0 - 1977891 C e chlSab2.chr15 414616 884 - 91754291 I e cerAty1.NW_012004056v1 481174 0 + 16847902 C e macFas5.chr2 66379 0 + 192460366 C e rheMac8.chr2 202459112 0 + 204787373 C a score=1240668.000000 s hg38.chr3_KI270779v1_alt 122049 170 + 205312 CCTTGCCTCTGACACATGACTCATGACCTC-------CTCCCCA--------GTATATTGAACAT------GGG----TTGTT------TAGAC----CTAGGAGATGGTC-GGGGCTGGGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTC-AAAGAGTGCATTGTCTGGCGCAGGTGACAAATGTCAACAGATTTTACCGTGT s panTro5.chr3 200111221 171 + 202621043 CCTTGCCTCTGACACATGACTCATGACCTC-------CTCCCCA--------GTATATTGAACAT------GGG----TTGTT------TAGAC----CTAGGAGATGgtcaggggctgggggtgtcaaggtgacttaggtggagtctaaactc-aaagagtgcattgtctggcgcaggtgacaaatgtcaacagaTTTTACCATGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86460 171 + 190779 CCTTGCCTCTGACACATGACTCATGACCTC-------CTCCCCA--------GTATATTGaacat------ggg----ttgtt------tagac----ctaggagatggtcaggggctgggggtgtcaaggtgacttaggtggagtctaaactc-aaagagtgcattgtctggcgcaggtgacaaatgtcaacagattttaccatGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50365 171 + 106623 CCTTGCCTCTGACGCATGACTCATGACCTC-------CTCCCCA--------GTATATTGAACAT------GGG----TTGTT------TAGAC----CTAGGAGATGgtcaggggctaggggtgtcaaggtgacttaggtggagtctaaactc-aaagagtgcattgtctggcgcagatgacaaatgtcaacagaTTTTACCgtgt i gorGor5.CYUI01000576v1 C 0 I 238 s nomLeu3.chr11 120859309 170 + 123690457 CCTTGCCTCTGATGCATGACTCATGACCTC-------CTCCCC---------GTATATTGAACAT------GGG----TTGTT------TAGAC----CTAGGAGATGGTCAGGGGCTGGGGGTGTCAAGGTGACTTAGGTGGAGTGTAAACTC-AAAGAGTGCATTGTCTGGCGCAGGTGACAAATGTCAACAGATTTTACCGTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459112 166 + 204787373 ----GCCTCTGCTGCATGACTCATGACC-C-------CTCCACA--------GTATACTGAACAT------GGG----TTAAG------TAGAC----CTAGGAGGTGGTCAGGGGCTGTGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTC-AAAGAGTGCATAGTCTGGTGCAGGTGACAAATGTCAACAGATTTTACCACGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66379 166 + 192460366 ----GCCTCTGATGCATGACTCATGACC-C-------CTCCACA--------GTATACTGAACAT------GGG----TTAAG------TAGAC----CTAGGAGATGGTCAGGGGCTGTGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTC-AAAGAGTGCATAGTCTGGTGCAGGTGACAAATGTCAACAGATTTTACCACGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 541846 166 + 19675229 ----GCCTCTGATGCATGACTCATGACC-C-------CTCCACA--------GTATACTGAACAT------GGG----TTAAG------TAGAC----CTAGGAGGTGGTCAGGGGCTGTGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTC-AAAGAGTGCATAGTCTGGTGCAGGTGACAAATGTCAACAGATTTTACCACGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481174 166 + 16847902 ----GCCTCTGATGCATGACTCATGACC-C-------CTCCACA--------GTATACTGAACAT------GGG----TTAAG------TAGAC----CTAGGAGGTGGTCAGGGGCTGGGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTC-AAAGAGTGCATAGTCTGGTGCAGGTGACAAATGTCAACAGATTTTACCAtgt i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 572780 166 - 1977891 ----GCCTCTGATGCATGACTCATGACC-C-------CTCCACA--------GTATACTGAACAT------GGG----TTAAG------TAGAC----CTAGGAGGTGGTCAGGGGCTGGGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTC-AAAGAGTGCATAGTCTGGTGCAGGTGACAAATGTCAACAGATTTTACCACGT i manLeu1.NW_012102020v1 C 0 I 671 s colAng1.NW_012118932v1 451469 167 + 7796314 ----GCCTCTGATGCATGACTCATGACC-C-------CTCCCCA--------GTATACTGAACAT------GGG----TTAAG------TAGAC----CTAGGAGATCCTcaggggctgggggtgtcaaggtgacttaggtggagtctaaactcaaaagagtgcatagtctggtgcaggtgacaaatgtcaacagaTTTTACCAtgt i colAng1.NW_012118932v1 C 0 I 35 s calJac3.chr17 931458 167 - 74750902 CTT-GCCTCTGGTCCACGACTCTTGGCCCC-------TGCCCCA--------GTATATTGGACAT------CGA----TTGTT------TAGGCAGAAGTAGGAGCTGGTCAGGTGCTGCAGGTGTCAAGGTGACTTAGGAGGAGTCTAAATTC---AGAGTGCATAGTCTGGTGCAGGTGACAAATGGCAACAGATTTTAC----- i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 422798 173 - 6778120 CTT-GCCTCTGATCCACAACTTTTGGCCCC-------TGCCCCA--------GCACATTGGACAT------CGA----TTGTT------TAGGCAGAActaggaggtggtcggg-gctgcgggtgtcaaggtgacttaggaggagtctaacttc-aaagagtgcgcagtctggtgcaggtgacagctgtcagcagaTCTCACCATGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 67272 174 - 69927 CTT-GCCTCTGATCCACGACCCTTGGCCCC-------TGCCCCA--------GTATATCAGACAT------CGA----TGGTC------TAGACAGAACTAGGAGGTGgtcaggtgctgcgggtgtcaaggtgacttaggaggagtctaaattc-aaagagtgcacagtctggtgcaggtgacaagtgtcgacagaTTTTACCACGT i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65429250 153 - 98207768 CTCCATCTCTGATCCCAGTC---------C-------ACCCTCA-------TATGTACCAAACAC------AAACTCTTCAGC------TAAGC----CCTAGAGATGTCCAGGTGCCAGGAATGTC------ACCTG--------TTATATCC-AAAGAGCCTTTGGTCAAGGGCAGCAGATGAATGTCATCAGACCTGATTCGTT i mm10.chr16 C 0 I 1 s canFam3.chr33 29067096 166 + 31377067 CTTTGCCTCCGCCCCCTGACTCACGCTCTCGTTCTCGCCCCACA--------TGTTTTTAAACAT------TGA----TTATGTCCAGCTAGAC----CTAGGGGATGGTCGGGTGCTGGGG--GTCAAGCTGACTCAGG---------------AAAGA-CCCCTAGT-TGGTGAAGTAGACAGGTGTCAACGGACTTCCCCTTAC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3891279 178 + 6579706 -CTTACTTCTGATCCCTGACCCACCCACTA-------TTCCCCACACCACGTGTCTGGTGGGTATCTGTTAGGT----TTAAG------TAAAC----CTAAGGGCTGGCCTCgtgctg-gggtgtcaggacggcttaggaactggccgtactc-acagagcacacattctggtgcaatggacaaatgtcaacagattttac----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e saiBol1.JH378146 458981 7 + 17725628 I e chlSab2.chr15 414616 884 - 91754291 I a score=51735.000000 s hg38.chr3_KI270779v1_alt 122219 6 + 205312 GGAGTG s panTro5.chr3 200111392 6 + 202621043 GGAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86631 6 + 190779 GGAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50774 6 + 106623 ggagtg i gorGor5.CYUI01000576v1 I 238 C 0 s nomLeu3.chr11 120859479 6 + 123690457 GGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459278 6 + 204787373 ggagtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66545 6 + 192460366 ggagtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542012 6 + 19675229 ggagtg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481340 6 + 16847902 ggagtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415500 6 - 91754291 GGAGTG i chlSab2.chr15 I 884 C 0 s manLeu1.NW_012102020v1 573617 6 - 1977891 GGAGTG i manLeu1.NW_012102020v1 I 671 C 0 s colAng1.NW_012118932v1 451671 6 + 7796314 ggagtg i colAng1.NW_012118932v1 I 35 C 0 s cebCap1.NW_016107444v1 422971 6 - 6778120 GGAGTG i cebCap1.NW_016107444v1 C 0 I 380 s aotNan1.NW_018503669v1 67446 6 - 69927 GGAGTG i aotNan1.NW_018503669v1 C 0 I 381 s mm10.chr16 65429404 5 - 98207768 GGATT- i mm10.chr16 I 1 C 0 s canFam3.chr33 29067262 6 + 31377067 AGGGTC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e dasNov3.JH569502 3891457 0 + 6579706 C e calJac3.chr17 931625 0 - 74750902 C e saiBol1.JH378146 458981 7 + 17725628 I a score=28986.000000 s hg38.chr3_KI270779v1_alt 122225 8 + 205312 TGGAGTGG s panTro5.chr3 200111398 8 + 202621043 TGGAGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86637 8 + 190779 TGGAGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50780 8 + 106623 tggagtgg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859485 8 + 123690457 TGGAATGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459284 8 + 204787373 gggagtgg i rheMac8.chr2 C 0 I 392 s macFas5.chr2 66551 8 + 192460366 gggagtgg i macFas5.chr2 C 0 I 358 s macNem1.NW_012014355v1 542018 8 + 19675229 gggagtgg i macNem1.NW_012014355v1 C 0 I 421 s cerAty1.NW_012004056v1 481346 8 + 16847902 gggagtgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415506 8 - 91754291 TGGAGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573623 8 - 1977891 GGGAGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451677 8 + 7796314 gggagtgg i colAng1.NW_012118932v1 C 0 I 49 s calJac3.chr17 931625 2 - 74750902 ----AT-- i calJac3.chr17 C 0 C 0 s mm10.chr16 65429409 6 - 98207768 --TAATGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29067268 4 + 31377067 TAGA---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891457 8 + 6579706 gagggtgt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e aotNan1.NW_018503669v1 67452 381 - 69927 I e cebCap1.NW_016107444v1 422977 380 - 6778120 I e saiBol1.JH378146 458981 7 + 17725628 I a score=1820.000000 s hg38.chr3_KI270779v1_alt 122233 1 + 205312 -G s panTro5.chr3 200111406 1 + 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86645 1 + 190779 -G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50788 1 + 106623 -g i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859493 1 + 123690457 -G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459684 1 + 204787373 -g i rheMac8.chr2 I 392 C 0 s macFas5.chr2 66917 1 + 192460366 -g i macFas5.chr2 I 358 C 0 s macNem1.NW_012014355v1 542447 1 + 19675229 -g i macNem1.NW_012014355v1 I 421 C 0 s cerAty1.NW_012004056v1 481354 1 + 16847902 -g i cerAty1.NW_012004056v1 C 0 I 532 s chlSab2.chr15 415514 1 - 91754291 -G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573631 1 - 1977891 -G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451734 1 + 7796314 -g i colAng1.NW_012118932v1 I 49 C 0 s calJac3.chr17 931627 1 - 74750902 -G i calJac3.chr17 C 0 C 0 s dasNov3.JH569502 3891465 1 + 6579706 c- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e mm10.chr16 65429415 0 - 98207768 C e canFam3.chr33 29067272 0 + 31377067 C e aotNan1.NW_018503669v1 67452 381 - 69927 I e cebCap1.NW_016107444v1 422977 380 - 6778120 I e saiBol1.JH378146 458981 7 + 17725628 I a score=429844.000000 s hg38.chr3_KI270779v1_alt 122234 88 + 205312 GAGTGCTAGGCTTGCAGT---AGTGataatagca---gtcatcatgtttgaatac-----ttgtgtgtcaggcactggactaaatgcttgacacgcgtt s panTro5.chr3 200111407 88 + 202621043 GAGTGCTAGGCTTGCAGT---AGTGataatagca---gtcatcatgtttgaatac-----ttgtgtgtcaggcactggactaaatgcttgacacgcgtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86646 88 + 190779 GAGTGCTAGGCTTGCAGT---AGTGataatagca---gtcatcatgtttgaatac-----ttgtgtgtcaggcactggactaaatgcttgacacgcgtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50789 88 + 106623 gagtgCTAGGCTTGCAGT---AGTGatcatagca---gtcatcatgtttgaatac-----ttgtgtgtcaggcattggactaaatgcttgacacacatt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859494 85 + 123690457 GAGTGCTAGGCTTGCAGT---AGTaataatagca------atcatgtttgaatac-----ttgtgtgtcaggcactggactaaatgcttgacacacgtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459685 85 + 204787373 gagtgCTATGTGTGCAGT---AGTaataatagca---attacaatgtttgaatac-----ttgcgtgtcgggcaccgtactaaatgcttgacgcac--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 66918 85 + 192460366 gagtgCTATGTGTGCAGT---AGTaataatagca---attacaatgtttgaatac-----ttgtgtgtcgggcaccgtactaaatgcttgacgcac--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542448 85 + 19675229 gagtgCTATGTGTGCAGT---AGTaataatagca---attacaatgtttgaatac-----ttgcgtgtcgggcaccgtactaaatgcttgacgcac--- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 415515 85 - 91754291 GAGTGCTATGCTTGCAGT---AGTaataatagca---attagaatgtttgaatac-----ttgcgtgtcgggcaccgtactaaatgcttgacgcac--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573632 85 - 1977891 GAGTGCTATGTGTGCAGT---AGTaataatagca---attacaatgtttgaatac-----ttgcatgtcgggcatggtactaaatgcttgacgcac--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451735 85 + 7796314 gagtgCTATGCTTGCAGT---AGTaataatagca---attacaaggtttgaatac-----tggcctgtcgggcaccgtactaaatgcttgacgcac--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 931628 81 - 74750902 GAGTGCCACGCTAACAGC---AGTAATAACAAAA------ATAGTTTTCGAATAC-----CTGTGTGTCGGCCACCATAC----TGCTTTACATGCATT i calJac3.chr17 C 0 C 0 s mm10.chr16 65429415 81 - 98207768 --------CTCTGGCAGTCAGGGTATTAATagta---ataatcactttgaattatgcctgttgtgtttcag------tactaagtgctttacactatt- i mm10.chr16 C 0 C 0 s canFam3.chr33 29067272 91 + 31377067 TGCTGTTGTACCAGCAGT---AGGAATAATTATTATCATtataatttttgagcac-----ttgtattttaggcaccatggtaagcgctttacatacatt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891466 81 + 6579706 gagtgctatagtaacagt---agtagcagcagta---ct-----ttttagaacaagta--ttgtgtttcaggcactgtactaaat-----acatacatt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e aotNan1.NW_018503669v1 67452 381 - 69927 I e cebCap1.NW_016107444v1 422977 380 - 6778120 I e saiBol1.JH378146 458981 7 + 17725628 I e cerAty1.NW_012004056v1 481355 532 + 16847902 I a score=9090.000000 s hg38.chr3_KI270779v1_alt 122322 1 + 205312 a s panTro5.chr3 200111495 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86734 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50877 1 + 106623 a i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859579 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459770 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67003 1 + 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542533 1 + 19675229 a i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481887 1 + 16847902 a i cerAty1.NW_012004056v1 I 532 C 0 s chlSab2.chr15 415600 1 - 91754291 a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573717 1 - 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451820 1 + 7796314 a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 931709 1 - 74750902 G i calJac3.chr17 C 0 C 0 s mm10.chr16 65429496 1 - 98207768 a i mm10.chr16 C 0 C 0 s canFam3.chr33 29067363 1 + 31377067 a i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891547 1 + 6579706 a i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e aotNan1.NW_018503669v1 67452 381 - 69927 I e cebCap1.NW_016107444v1 422977 380 - 6778120 I e saiBol1.JH378146 458981 7 + 17725628 I a score=36256.000000 s hg38.chr3_KI270779v1_alt 122323 3 + 205312 tca s panTro5.chr3 200111496 3 + 202621043 tca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86735 3 + 190779 tca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50878 3 + 106623 tca i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859580 3 + 123690457 tca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459771 3 + 204787373 tca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67004 3 + 192460366 tca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542534 3 + 19675229 tca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481888 3 + 16847902 tca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415601 3 - 91754291 tca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573718 3 - 1977891 tca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451821 3 + 7796314 tca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 931710 3 - 74750902 TTA i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 67833 3 - 69927 tca i aotNan1.NW_018503669v1 I 381 C 0 s mm10.chr16 65429497 3 - 98207768 tca i mm10.chr16 C 0 C 0 s canFam3.chr33 29067364 3 + 31377067 tca i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891548 3 + 6579706 tca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e cebCap1.NW_016107444v1 422977 380 - 6778120 I e saiBol1.JH378146 458981 7 + 17725628 I a score=13923.000000 s hg38.chr3_KI270779v1_alt 122326 1 + 205312 t s panTro5.chr3 200111499 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86738 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50881 1 + 106623 t i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859583 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459774 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67007 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542537 1 + 19675229 t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481891 1 + 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415604 1 - 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573721 1 - 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451824 1 + 7796314 t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 931713 1 - 74750902 T i calJac3.chr17 C 0 I 3982 s cebCap1.NW_016107444v1 423357 1 - 6778120 t i cebCap1.NW_016107444v1 I 380 C 0 s aotNan1.NW_018503669v1 67836 1 - 69927 t i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65429500 1 - 98207768 t i mm10.chr16 C 0 C 0 s canFam3.chr33 29067367 1 + 31377067 t i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891551 1 + 6579706 t i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e saiBol1.JH378146 458981 7 + 17725628 I a score=33848.000000 s hg38.chr3_KI270779v1_alt 122327 3 + 205312 tta s panTro5.chr3 200111500 3 + 202621043 tta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86739 3 + 190779 tta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50882 3 + 106623 ttc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859584 3 + 123690457 tta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459775 3 + 204787373 tta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67008 3 + 192460366 tta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542538 3 + 19675229 tta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481892 3 + 16847902 tta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415605 3 - 91754291 tta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573722 3 - 1977891 tta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451825 3 + 7796314 tta i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 423358 3 - 6778120 tta i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 67837 3 - 69927 tta i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65429501 3 - 98207768 tta i mm10.chr16 C 0 C 0 s canFam3.chr33 29067368 3 + 31377067 tta i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891552 3 + 6579706 tta i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e otoGar3.GL873829 413197 868 - 608964 M e calJac3.chr17 931714 3982 - 74750902 I e saiBol1.JH378146 458981 7 + 17725628 I a score=2672659.000000 s hg38.chr3_KI270779v1_alt 122330 313 + 205312 aacggtgatacggcctgttgactcaggtgc----tatgattgtcc----ctgtgtttacagatgacctgttatatgatgtgtctagttagcacacctgctctagtga----------------------ggggcagagcagggattctgattctgggtgtgcaggattctacagcccCAACCACTCAGCAGTTGTGCCACTTTGCCTGTGACTGAGGTAT-------GGCATg-gcagccaagaagagggagccgcccgttccctctgggaagtcagggaagactcccgggaggtgaaatgtc--c-tttA--GTTT---CTTTCAGATCATAACCAAGATG------------------CTTAGAGGTCTCGGCTG s panTro5.chr3 200111503 313 + 202621043 aacggtgatacggcctgttgactcaggtgc----tatgattgtcc----ctgtgtttacagatgacctgttatatgatgtgtctagttagcacacctgctctagtga----------------------ggggcagagcagggattctgattctgggtgtgcaggattctacagcccCAACCACTCGGCAGTTGTGCCACTTTGCCTGTGACTGAGGTAT-------GGCATg-gcagccaagaagagggagccgcctgttccctctgggaagtcagggaagactcccgggaggtgaaatgtc--c-tttA--GTTT---CTTTCAGATCATAACCAAGATG------------------CTTAGAGGTCTCGGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 86742 313 + 190779 aacggtgatacggcctgtggactcaggtgc----tatgattgtcc----ctgtgtttacagatgacctgttatatgatgtgtctagttagcacacctgctctagtga----------------------ggggcagagcagggattctgattctgggtgtgcaggattctacagcccCAACCACTCGGCAGTTGTGCCACTTTGCCTGTGACCGAGGTAT-------GGCATG-GCAGCCAAGAAGAGGGAGCCGCCGGTTCCCTCTGGGAAGTCAGGGAAGACTCCCGGGAGGTGAAATGTC--C-TTTA--GTTT---CTTTCAGATCATAACCAAGATG------------------CTTAGAGGTCTCGGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 50885 313 + 106623 aacggtgatacggcctgttgactcaggtgc----tatgactgtcc----ctgtgtttacagatgacctgttacatgatgtgtctagttagcacaactgctctagtga----------------------ggggcagagcagggattctgattccgggtgtgcaggattctacagcccCAACCACTCGGCAGTTGTGCCACTTTGCCTGTGACTGAGGTAT-------GGCATg-gcagccaagaagagggagccgcccgttccctctgggaagtcagggaagactcccaggaggtgaaatGTC--C-TTTA--GTTT---CTTTCAGATCATAACCAAGATG------------------CTTAGAGGTCTCGGCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859587 312 + 123690457 aatggtgatacagcctgttgactcaggtgc----tatgattgtcc----ctgtgtttacagatgacctgttatatgatgtgtctagttagcaca-ctgctctagtga----------------------ggggcagagcagggattctgattctgggtgtgcaggattctagagccccaaccactcggcagttgcgccactttgcctGTGACTGAGGTAT-------GGCATg-gcagccaagaagagggagctgccagttccctcttggaagtcagggaagactccctggaggtgaaatgtc--c-tttA--GTTT---CTTTCAGATCATAACCAGGAAG------------------CTTAGAGGTCTCAGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202459778 313 + 204787373 aacggtgagacagcctgttgactcaggtgc----tatgcttgtcc----ctgtgtttacagatgacctgttacataatgtgtgtaattaacatacctgctctagtga----------------------ggggcagcgcagaggttttgattctgggtgtgcaggatgctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCTGTGATTGGGGTAT-------GGCatg-gaagccaagagcagggagcacccagttccctctgggaagtcagggaagactccctggaggTGAAACGTC--C-TTTG--GTTT---CTTCCAGGTCATACCCGAGATG------------------CTTAGAGGTCTCGGCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67011 313 + 192460366 aacggtgagacagcctgttgactcaggtgc----tatgcttgtcc----ctgtgtttacagatgacctgttacataatgtgtgtaattaacatacctgctctagtga----------------------ggggcagcgcagaggttttgattctgggtatgcaggatgctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCTGTGATTGGGGTAT-------GGCatg-gaagccaagagcagggagcacccagttccctctgggaagtcagggaagactccctggaggTGAAACGTC--C-TTTG--GTTT---CTTCCAGGTCATACCCGAGATG------------------CTTAGAGGTCTCGGCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542541 313 + 19675229 aacggtgagacagcctgttgactcaggtgc----tatgcttgtcc----ctgtgtttacagatgacctgttacataatgtgtgtaattaacatacctgctctagtga----------------------ggggcagcgcagaggttttgattctgggtgtgcaggatgctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCTGTGATTGGGGTAT-------GGCatg-gaagccaagagcagggagcacccagttccctctgggaagtcagggaagactccctggaggTGAAACGTC--C-TTTG--GTTT---CTTCCAGGTCATACCCGAGATG------------------CTTAGAGGTCTCGGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 481895 313 + 16847902 aacggtgagacagcctgttgactcaggtgc----tatgcttgtcc----ctgcgtttacagatgacctgttatataatgtgtgtaattaacatacctgctctagtga----------------------ggggcagcgcagagattttgattctgggtgtgcacgatgctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCTGTGATTGGGGTAT-------GGCATG-GACGCCAAGAGCAGGGAGCACCCCGTTCCCTCTGGGAAGTCCGGGAAGACTCCCTGGAGGCGAAACGCC--C-TTTG--GTTT---CTTCCAGGTCATACCCGAGATG------------------CTCAGAGGGCTCGGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415608 310 - 91754291 aacggtgagacagcctgttgactcaggtgc----tgtgcttgtcc----ctgtgtttacagatgacctgttac---atgtgtgtaattaacatgcctgctctagtga----------------------ggagcagcgcagagattttgattctgggtgtgcaggattctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCTGTGATTGGGGTAT-------GGCatg-gaagccaagaacagggagcacccagttccctctgggaagtcagggaagactgcctggaggTGAAACGTC--C-TTTC--GTTT---CTTCCAGATCATACCCGAGATG------------------CTTAGAGGTCTCGGATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 573725 312 - 1977891 aacggtgagacagcctgtcgactctggtgc----tatgcttgtcc----ctgcgtttacagatgacctgttatataatgtgtgtaattaacgtacctgctctagtga----------------------ggggcagcacagagattttgattctgggtgtgcaggattctagagccTCAAACACTCGGCCGTTGTGCAACTTTGCCTgtgatt-gggtat-------ggcctg-gaagccaagagcagagagcaccccgttccctctgggaagtccgggaagactccctggaggCGAAACGTC--C-TTTG--GTTT---CTTCCAGGTCATACCCGAGATG------------------CTCAGAGGGCTCGGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 451828 313 + 7796314 aacggtgagacagcctgttgcctcaggtgc----tgtgattgtcc----ctgtgtttacagaggacctgttatataatgtgtctaattaacatacctgctctagtga----------------------gggacagtgcagagattttgaatctgggtgtgcaggattctagagccTCAGCCACTCAGCAGTTGTGCCACTTTGCCTGTGATTGAGGTgt-------ggcatg-gaagccaagaacagggagcacccagttctctctgggaagtcagggaagactccctggaggTGAAATGTC--C-TTTC--GTTT---CTTCCAGATCATACCCAAGATG------------------CTTAGCGGTCTCGGCTG i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 423361 327 - 6778120 aacggtgatacaacctattgactcaggtgc----tatgactgtcc----ctgtgtttacagatgacccgttatataatgtgtctaattagcacacttgttctagtga----------------------gtggcagggcaggggttttgaatctgggtgtgcaggattc-agagCTGCAACAACTCAGCAATTGCGCTACTTTGCCTGTGACTGAGGTAt-------ggcatg-ggagccaagac---agagcccccagttccctctgggaagccagggaagactccctggaCGTGAAATGCC--C-TTTG--TTTT---CTTCCAGATAACACCCAAGAAGTACAGGTCCTGAGAGATTCTTAGAGGGAGAGGCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 67840 322 - 69927 aatggtgatacaacctgttgactcaggtgc------tgattgtcc----ctgtgtttacagatgaCCCGTTATATGATG-GTCTAATTAGTACACTTGTTCTAGT------------------------GCAGCAGGGCAGGGGTTGTGAATCT-GCCGTGCAGGACTCTGGGGCTGCAGCCATTCGGCAATTGTGCTACTTTGCCTGTGACTGAGGTAT-------GGCACg-ggagccaagac---ggagcccccagttccctctgggaagtcagggaagactccctggaggtgaaatgcc--c-tttA--TTTT---CTTCCAGATAACACCCAAGAAGTACAGGTCCGGAGATATTCTTAGAGGGAGAGGCTG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 414075 326 - 608964 AAccttgctacagtctattgacataggtac----tattattgtcc----ctacatctgcagatgacctgctgcattatgtgttaaattatgacacctactccagtaa----------------------gtggctgagcaggaatttgaa----------gtgggattctagagcttcag-cactcaacagctgtgctaCTTTGCCTGTGATTGAGGTGTGAACTAGGGCATG-GGAGCCAAGAAGAGGGAGC-TCCAATTCCCTCTGGGAAGTCT-GGATGGCTCCATGGAGGTGAAATGTC--CATCTA--GGTT---CTTCCATATACTACCCAAGAAGTACAAGTTTTGAGAGGTGCTTAGAGGTAGAGGTGG i otoGar3.GL873829 M 868 C 0 s mm10.chr16 65429504 310 - 98207768 aatcttaatacaacctactgacc--ggtactacttactatcgtccacttttatatacaaagTTGATA---TAAATAACTTGTTTAATTATTGCTCCTGCTCTAGAGA----------------------GAGGCAGGGTAGAGTTTCAGGTTCC-TGTGTATAGGAGTCTAGAGGTCCTGCCATTCACCAATCTGGCTACTTtgct--taatggggatatagacgaggtcatg-gtatc-------agaggggtccctgtgccctttggggaatcaggga---------ggaggtga--------c---------tt---ctgCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTACCCAGAGGGACAGACTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29067371 361 + 31377067 aaccttgacacaacccgttgacacaggtat----tatgggtattt----ctac-tttacagatgagacatcaaatagtttgtctaattattgcacctgttctagggaatgattattgcacctgttctagggaatgttctagaggattagaacccgggtatgtatgactctggagcctcagcgcttcagctattgtgctacTTGGCGTGTGGTTGAGGGatggacaggggcctacggggccaagaggaaggagctgctggttccctctgggaagtcgaggagggcttcctggaggTGAAATACCTTC-CTGG--GGTTGAAATACCATATGACACCCAAG-TG--CAAGTCTCTAGGGACACTCAGGAGG-GAGGCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891555 331 + 6579706 aaccttaacacaacccatcgacccaggtac----tattattattc----ctacctttacaagtgag--actacgtaatttgcctaa----ggtcacaattccagtaa----------------------gaggtagagcagggagttgaat--caggtgtttagggctttatagcttacacc-ctcaataactgtgctCCTTTGCctatgactgaggtatagacaagggcatg-gcagccaagaagaggaagcccccagctctctttgggaagtcagggaaggcttccgagaggcgccatgcc--c-tctgGTGTTT---CTTCTTTATAATATCCAACAAGTGCAGATGTTGAAGGACGCTCATAGGGAGGGGCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e calJac3.chr17 931714 3982 - 74750902 I e saiBol1.JH378146 458981 7 + 17725628 I a score=440859.000000 s hg38.chr3_KI270779v1_alt 122643 49 + 205312 GGGTGACTTGG-CACCCTGGCCTCTGCTTATGATGAGT-------------------CGAGGTTTCTGT s panTro5.chr3 200111816 49 + 202621043 GGGTGACTTGG-CACCCTGGCCTCTGCTTATGATGAGT-------------------CGAGGTTTCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87055 49 + 190779 GGGTGACTTGG-CACCCTGGCCTCTGCTTATGATGAGT-------------------CGAGGTTTCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51198 49 + 106623 GGGTGACTTGG-CACCCTGGCCTCTGCTTATGATGAGT-------------------CGAGGTTTCTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859899 49 + 123690457 GGGTGACTTGG-CATCCTGGCCTCTGCTTATGATGAGT-------------------CGAGGTTTCTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460091 49 + 204787373 GGGTGACTTGG-CACCCTGGCCTCTGCTTGTGGTGAGC-------------------TGAGGTTTCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67324 49 + 192460366 GGGTGACTTGG-CACCCTGGCCTCTGCTTGTGGTGAGC-------------------TGAGGTTTCTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542854 49 + 19675229 GGGTGACTTGG-CACCCTGGCCTCTCCTTGTGGTGAGC-------------------TGAGGTTTCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482208 49 + 16847902 GGGTGACTTGG-CACCCTGGCCTCTGCTTGTGGTGAGC-------------------TGAGGTTTCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415918 49 - 91754291 GGGTGACTTGG-CACCCTGGCCTCTGCTTATGGTGAGT-------------------TGAGGTTTCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574037 49 - 1977891 GGGTGACTTGG-CACCCTGGCCTCTGCTTGTGGTGAGT-------------------TGAGGTTTCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452141 44 + 7796314 GGG-----TGG-CACCCTGGTCTCTGCTTATGGTGAGT-------------------TGAGGTTTCTGT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 458988 68 + 17725628 GGGTGACTTGG-CACCCCGGCCTCTGCTCATGACGAGTTGGTGACTCCAGCCCCTTCTGAGGTTTCTGT i saiBol1.JH378146 I 7 I 311 s cebCap1.NW_016107444v1 423688 67 - 6778120 GGGTGACTTGG-CACCCTGG-CTCTGCTCATGATGAGTTGGTGACTCCAACCCCTTCTGAGGTTTCTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68162 66 - 69927 GGGTGACTTGG-CACCCCGGCCTCTGCTCACGATGAGTCGGTGACTCCAGCCCCTTCTGAGATTTGT-- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 414401 35 - 608964 AGGTACCTTGG-CACCCTAACCTC---------------------------------CAAAATCTCTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65429814 68 - 98207768 GAGTGACGTGC-CACCCGAGATTCTTCTCAGGGCAAGCTGGTGATTCTAACACATTCTGTGGTCTCTAA i mm10.chr16 C 0 I 1 s canFam3.chr33 29067732 55 + 31377067 GGGTGACTCGGCCACCCTACACCCGAGTTATTCCAGTC--------------CCCTGGGGGGTCACTGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891886 68 + 6579706 -GATGACTTGGCCGCCTTTGACCCTGACCATGGAGAGTTGGTCATTCCAACCCTTTCTGAGGTCTCTGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e calJac3.chr17 931714 3982 - 74750902 I a score=255349.000000 s hg38.chr3_KI270779v1_alt 122692 31 + 205312 CTTGGGCCTTCCTCACTTCCTAATGC-CCTGC s panTro5.chr3 200111865 31 + 202621043 CCTGGGCCTTCCTCACTTCCCAATGC-CCTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87104 31 + 190779 CCTGGGCCTTCCTCACTTCCTAATGC-CCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51247 31 + 106623 CCTGGGCCTTCCTCACTTCCTAATGC-CCTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859948 31 + 123690457 CCTGGGCCTTCCTCACTTCCTAATGC-CCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460140 31 + 204787373 CCCCGGCCTTCCTCACTTCCTAATGC-CCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67373 31 + 192460366 CCCCGGCCTTCCTCACTTCCTAATGC-CCTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542903 31 + 19675229 CCCCGGCCTTCCTCACTTCCTAATGC-CCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482257 31 + 16847902 CCCCGGCCTTCCTCACTTCCTAATGC-CCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415967 31 - 91754291 CCCCCGCCTTCCTCACTTCCTAATGC-CCTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574086 31 - 1977891 CCCCGGCCTTCCTCACTTCCTAATGC-CCTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452185 31 + 7796314 CCCCGGCCTTCCTCACTTCCTAATGC-CCTGC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 459367 31 + 17725628 cccggccCTTCCTCACTTCCTAACCA-CCTGC i saiBol1.JH378146 I 311 C 0 s cebCap1.NW_016107444v1 423755 31 - 6778120 CCTGAGCCTTCCTCACTTCCTAACCA-CCTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68228 31 - 69927 CCTGGGCCTCCCTCACCTCCTAACCC-CCTGC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 414436 18 - 608964 CCTCAGGCTGACCC-CTTC------------- i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65429883 31 - 98207768 CCTGAAGCTTCCTGGCATCCTAGGCC-CTTGA i mm10.chr16 I 1 I 3 s canFam3.chr33 29067787 31 + 31377067 -CCTGGGCTTCCTGCCTTCCCCATCCTTCCGC i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3891954 20 + 6579706 CTGGGGTTTTCCCGGCCCCC------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e micMur3.chr1 25901256 710 - 114275543 I e calJac3.chr17 931714 3982 - 74750902 I a score=98256.000000 s hg38.chr3_KI270779v1_alt 122723 8 + 205312 ACCTCCCA s panTro5.chr3 200111896 8 + 202621043 ACCTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87135 8 + 190779 ACCTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51278 8 + 106623 ACCTCCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859979 8 + 123690457 ACCTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460171 8 + 204787373 ACCTCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67404 8 + 192460366 ACCTCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542934 8 + 19675229 ACCTCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482288 8 + 16847902 ACCTCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 415998 8 - 91754291 ACCTCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574117 8 - 1977891 ACCTCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452216 8 + 7796314 ACCTCCCA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 459398 8 + 17725628 ACCTCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 423786 8 - 6778120 ACCTCCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68259 8 - 69927 ACCTCCCA i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25901966 8 - 114275543 ACCTCCCC i micMur3.chr1 I 710 C 0 s otoGar3.GL873829 414456 8 - 608964 GCCTCCCA i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65429917 5 - 98207768 ACCCC--- i mm10.chr16 I 3 C 0 s canFam3.chr33 29067821 7 + 31377067 CCCTCCT- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3891974 6 + 6579706 -CCTCCC- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7415947 996 + 22200726 I e calJac3.chr17 931714 3982 - 74750902 I a score=1008410.000000 s hg38.chr3_KI270779v1_alt 122731 84 + 205312 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGCGATGGTTCCGCCCTG- s panTro5.chr3 200111904 84 + 202621043 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCAC----AC-AGCGATGGTTCCGCCCTG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87143 84 + 190779 TGGGGCAAGAGGCTCC-GGCCACCTCTGGCAGTTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCAC----AC-AGCGATGGTTCCGCCCTG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51286 84 + 106623 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGTGATGGTTCTGCCCTG- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120859987 84 + 123690457 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGAGAGATGAC------------------------------------AAGACGAAGGCCAC----AC-AGTGATGGTCCTGCCCTC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460179 84 + 204787373 TGGGGCAACAGGCTCC-GGCCTTCTCTGGCAATTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGGGATGGTTCCGCCCTC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67412 84 + 192460366 TGGGGCAACAGGCTCC-GGCCTTCTCTGGCAATTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGGGATGGTTCCGCCCTC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 542942 84 + 19675229 TGGGGCAACAGGCTCC-GGCCTTCTCTGGCAGTTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGGGATGGTTCCGCCCTC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482296 84 + 16847902 TGGGGCAAGAGGCTTC-GGCCTCCTCTGGCAATTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGGGATGGTTCCGCCCTC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416006 82 - 91754291 TGGGGCAAGAGGCTCC-GGCCTC--CTGGCAATTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGGGATGGTTCCGCCCTC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574125 84 - 1977891 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAATTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGCCGC----AC-AGGGATGGTTCCGCCCTC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452224 84 + 7796314 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAATTGAATCCAGATGGATGAG------------------------------------AAGATGAAGGCCGC----AC-AGTGATGGTTCCGCCCTC- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 459406 84 + 17725628 TGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGATAGATGAC------------------------------------AAGATGAAGGATGC----CA-GGCGATGGCTCGGCCCCG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 423794 84 - 6778120 GGGGGCAAGAGGCTCC-GGCCTCCTCTGGCAACTGAATCCAGATGGATGAC------------------------------------GAGATGAAGGGTGC----CC-AGTGATGGCTCAGCCCTG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68267 84 - 69927 TGGGGCAAGAGACTCC-GGCCTCCTCTCTCAACTGAATCCAGATGGATGAC------------------------------------AAGATGAAGGATGG----CC-AGTGATGGCTCAGCCCTG- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25901974 85 - 114275543 TGGAGCAAGAGGATCC-GGCCTCCTCTGGCAATTGAATCGAGATGAACGAC------------------------------------AAGATGAAGGACAC----ACAAGTGATGGCTCAGCCCTT- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7416943 85 + 22200726 TGGAGCAAGAGGCTCC-AGCCTCCTCTGGCAATTGAATCTAGATGAATGAC------------------------------------AAGATGAAGGACAC----ACAAGGCATGGCTCAGCCCTT- i proCoq1.NW_012133858v1 I 996 C 0 s otoGar3.GL873829 414464 120 - 608964 TGGGTTAAGAGACTCC-TGCCTCCTCTGGCAATTGAATCTACATGAATGATAAGATGAAGGACTCttttttttttttaatttttttGAAGATGAAGGACTC----TTAAGTGATGGCT-GGCTCTT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65429922 71 - 98207768 -TGGGCAAGAGGCTCC---CCCTCTTTGGGAAATTAAGGTAGCTGAAGGAT---------------------------------------GTGTAAGCTAC-------TGCAAGGTCCCTG------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29067828 88 + 31377067 GGGGGCAGGAGGCTCTGGGCCTCCTCTGGCAGTCAAGTCTCGATGGGTGGC-------------------------------------AGATGTGGAGCCCGGGAGC-AGGGCTGGCCCCTGCTTG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3891980 70 + 6579706 --------------CC-AGCCACTCCTGGCAATCGAATCTAGGTGGGTGTT------------------------------------GAGATGCAGGACAC----A--AGCGATGGCTCAGCCCACT i dasNov3.JH569502 C 0 C 0 e calJac3.chr17 931714 3982 - 74750902 I a score=3145972.000000 s hg38.chr3_KI270779v1_alt 122815 204 + 205312 GCCTGAACCCGCCAAGC-GCCCCCTCCCACCCAGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACTTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAAAAGTCTGTCGGGCCAGCC s panTro5.chr3 200111988 204 + 202621043 GCCTGAACCCGCCAAGC-GCCCCCTCCCACCCAGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACATCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTAGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAAAAGTCTGTCGGGCCAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87227 204 + 190779 GCCTGAACCCGCCAAGC-GCCCCCTCCCACCCAGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACATCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAAAAGTCTGTCGGGCCAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51370 204 + 106623 GCCTGAACCCGCCAAGC-GCCCCCTCCCACCCACAGCGTGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAG-G-GTTAACCCAGACTT-ACCCAAAAAGTCTGTCGGGCCAGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860071 204 + 123690457 GCCTGAACCCGCCAAGC-ATCCCCTCCCACCCAGAGCATGGCCTGCAGCACTGACCAAGGCGTTGAGCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTGTCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAAAAGTCTGTCGGGCCAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460263 205 + 204787373 GCCTGAACCCGCCAAGC-GTCCCCTCCCACCCGGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTTAACCCAAGAAGTCCGTCGGGCCAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67496 204 + 192460366 GCCTGAACCCGCCAAGC-GTCCCCTCCCACCCGGAGCGTGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAAAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAGAAGTCCGTCGGGCCAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543026 204 + 19675229 GCCTGAACCCGCCAAGC-GTCCCCTCCCACCCGGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAGAAGTCCGTCGGGCCAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482380 204 + 16847902 GCCTGAACCCGCCAAGC-GCCCCCTCCCACCCGGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAGAAGTCCGTCGGGCCAGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416088 204 - 91754291 GCCTGAACCCGCCAAGC-GTCCCCTCCCACCCGGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTAGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAGAAGTCCGTGGGGCCAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574209 204 - 1977891 GACTGAACCCGCCAAGC-GCCCCCTCCCACCCGGAGCGCGGCCTGCAGCACCGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCGT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-ACCCAAGAAGTCCGTCGGGCCAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452308 204 + 7796314 GCCTGAACCTGCCAAGC-GTCCCCGCCCACCCAGAGCACGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCACGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCAC-G-GTTTACCCAGACTT-TCCCAAGATGTCCGTCGGGCCAGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 935696 243 - 74750902 GCCTGAA--CCCCAAGC-TCTCCTTCCCGCCCAGAGTGCAGCCTGCAGCACTGACCGAGGCGTTGATGTCTGCCATGGAGGCATTTTCCTCTTCGCTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGGAAATTCATCATCACCCCATGGTTTACACAGATGGGAGAAGGAAATTCATCAGCACCCCAT-G-GTTTACCCATACTT-ACCCAAGAAGTTTGTTGGGTCGGCC i calJac3.chr17 I 3982 C 0 s saiBol1.JH378146 459490 203 + 17725628 GCCTGAA-CCCCCAAGC-TCTCCTTGCCACCCCGAGCGAAGCCTGCAGCACTGACCGAGGCGTTGACGTCTGCCATGGAGGCATTTTCCTCTTCGCTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGGAAATTCATCAT-----------------------------------------CACCCCAT-G-GTTTACCCAGACTT-ACCCAAGAAGTTTGTTGGGCCAGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 423878 203 - 6778120 GCCTGAA-CCCCCAAGC-TCTCCTTCCCACCCAGAGCGCTGCCTGTAGCACTGACCGAGGCGTTGACGTCTGCCATGGAGGCATTTTCCTCTTCGCTGAGCAAGAGCTGGATGACTCTTAGGGGAGGTTCTGGAGATGGGAGAAGGAAATTCATCAT-----------------------------------------CACCCCGT-G-GTTTACCCAGACTT-ACCCAAGAAGTTTGCTGGGCCAGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68351 204 - 69927 GCCTGAACCCCCCAAGC-TCTCCTTCCCACCCAGAGCGCAGCCTGCAGTACTGACCGAGGCGTTGACGTCTGCCATGGAGGCACTTTCCTCTTCGCTGAGCAAGAGCTGGATGACTCGTAAGGGAGGTTCTGGAGGTGGGAGAAGGAAATTCATCAT-----------------------------------------CGCCCCAT-G-GTTTACCCAGACTT-ACCCAAGAAGTCTGTTGGGCCAGCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902059 204 - 114275543 GTCCGAACCTGCCAAGA-TCCACCTCCCACCCTAACCCCAG-CTACAGCACTGACCGAGGCGTTGACATCTGTCATGGAGGCATTTTGGTCTTCACTGAGTGAGATCTGGATGACTCTTAAGGGAAGCTCTGGAGATTAGAGAAACAAATTCATCAC-----------------------------------------CACCTCACAG-GTTTACCCAGATTT-ACCCAAGAAGGCCGTTGGGCCAGTC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7417028 200 + 22200726 GCCTGAACCTGCCAAGA-TCCACCTCCCTCCCAAAGCCCGG-CTGCAGCACTGACCGAGGCGTTGACATCTGCCATGGAGGCATTTTCGTCTTCACTGAGTGAGAGCTGGATGACTCTTAAGGGAAGCTCTGGAGAT----GGGACAAATTCATCAT-----------------------------------------CACCTCACAG-TTTTACCCAGATTT-ACTCAAGAAGGCCGTTGGGCCAGCC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 414584 198 - 608964 TCCTGAACCTGCCAAGA-TCCACCTCCCACCCACAGCCTGG-CTGCAGCACTGACCGAGGCGTTGACCTCTGCTTTGGAGGCATTTTCATCTTCCATGAGTGAGAGCTGGATGACTCTTAAGGGAAGCTCTAGAGATGGGAGAAACAAGTTCATTAT-----------------------------------------CACCTCATGG-GTTTACCCAGACTT-ACCCAAGA------CTTATCAAACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65429993 191 - 98207768 -GGAGACCCTTTCAAGA-TCCACTTCCCACTGGGAGCC-------CAGCACTGACCGAGGCGTTGACGTCAGCGGCGGAGGCATTTTCATCCTCCCTGAGAGAGAGCACGATGGTCCTTAAGGGAAGCTCTGGAGAT----AAAGAAGACCCATCTC-----------------------------------------AGACCCAG-A-GGGTTCCCAGACTT-ATCCAACTTCTATCCTGTGC-GGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29067916 181 + 31377067 -CCC---CCTGCCAGGC--CGCCTCCCCACCCTG---CTGGCCTGCAGCACCGACCGAGGCGTTGACATCGGCCACGGAGGCATTTTCTTCTTCACTGAGCCAGAGCTGGATGAGCCTCACCGGAAGCCCTGGAAACGGGAGACG-----------------------------------------------------CAGGCCAC-G-GTCACCCCCGG----CCCCGGGGAGGTGGCTGGGCCTGTC i canFam3.chr33 C 0 I 113 s dasNov3.JH569502 3892050 191 + 6579706 CCCTGAATCAGCCAACCTGCCCCCCCGCACCCAGAGCCTGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCGATCGAGGCATTCTCTTCCTCACTGAGCAAAAGCTGGATGACTCTTGAGGGAAGCTCTGGAGATGGGAGAAGCAGATTCTTAAT-----------------------------------------TGCCTCAT-GCGTTTACCCAGCCTC-ACCTGGGAAA--------------- i dasNov3.JH569502 C 0 C 0 a score=156208.000000 s hg38.chr3_KI270779v1_alt 123019 14 + 205312 CAAGTTGACTGCTC s panTro5.chr3 200112192 14 + 202621043 CAAGTCGACTGCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87431 14 + 190779 CAAGTCGACTGCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51574 14 + 106623 CAAGTCGACTGCTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860275 14 + 123690457 CAGGCCGACTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460468 14 + 204787373 CAGGGCAACGGCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67700 14 + 192460366 CAGGGCAACGGCTC i macFas5.chr2 C 0 I 7 s macNem1.NW_012014355v1 543230 14 + 19675229 CAGGGCAACGGCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482584 14 + 16847902 CAGGGCGACGGCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416292 14 - 91754291 CAGGGCGACGGCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574413 14 - 1977891 CAGGGCGACGGCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452512 14 + 7796314 CAGGGCGACTGCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 935939 14 - 74750902 CAGGGAGACTACTC i calJac3.chr17 C 0 I 7 s saiBol1.JH378146 459693 14 + 17725628 CAGGGAGACTACTC i saiBol1.JH378146 C 0 I 7 s cebCap1.NW_016107444v1 424081 14 - 6778120 CAGGGAGACTACTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68555 14 - 69927 CAGGGAGACTCCTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902263 14 - 114275543 CAAGAGAACTGCTC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7417228 14 + 22200726 CAGGCGAACTGCTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 414782 14 - 608964 CAGGCAGCCCACTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430184 14 - 98207768 CAGAGAGACAGCTC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3892241 8 + 6579706 ------GACCACCC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29068097 113 + 31377067 I a score=43928.000000 s hg38.chr3_KI270779v1_alt 123033 5 + 205312 CATTC s panTro5.chr3 200112206 5 + 202621043 CATTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87445 5 + 190779 CATTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51588 5 + 106623 CATTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860289 5 + 123690457 CATTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460482 5 + 204787373 CATTC i rheMac8.chr2 C 0 I 2 s macNem1.NW_012014355v1 543244 5 + 19675229 CATTC i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 482598 5 + 16847902 CATTC i cerAty1.NW_012004056v1 C 0 I 2 s chlSab2.chr15 416306 5 - 91754291 CATTC i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 574427 5 - 1977891 CATTC i manLeu1.NW_012102020v1 C 0 I 2 s colAng1.NW_012118932v1 452526 5 + 7796314 CATTC i colAng1.NW_012118932v1 C 0 I 2 s aotNan1.NW_018503669v1 68569 5 - 69927 CATTC i aotNan1.NW_018503669v1 C 0 I 2 s micMur3.chr1 25902277 5 - 114275543 TATGT i micMur3.chr1 C 0 I 2 s proCoq1.NW_012133858v1 7417242 5 + 22200726 TGTGT i proCoq1.NW_012133858v1 C 0 I 2 s otoGar3.GL873829 414796 5 - 608964 CATTC i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65430198 5 - 98207768 CATCC i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3892249 5 + 6579706 CATAC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e calJac3.chr17 935953 7 - 74750902 I e saiBol1.JH378146 459707 7 + 17725628 I e macFas5.chr2 67714 7 + 192460366 I a score=246729.000000 s hg38.chr3_KI270779v1_alt 123038 22 + 205312 CAGTGACAGAAGGTCACTGAAG s panTro5.chr3 200112211 22 + 202621043 CAGTGACAGAAGGTCACTGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87450 22 + 190779 CAGTGACAGAAGGTCACTGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51593 22 + 106623 CAGTGACAGAAGGTCACTGAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860294 22 + 123690457 CAGTGACAGAAGGTCACTGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460489 19 + 204787373 CAGTGAC---AGGTCACTGAAG i rheMac8.chr2 I 2 C 0 s macFas5.chr2 67721 19 + 192460366 CAGTGAC---AGGTCACTGAAG i macFas5.chr2 I 7 C 0 s macNem1.NW_012014355v1 543251 19 + 19675229 CAGTGAC---AGGTCACTGAAG i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 482605 19 + 16847902 CAGTGAC---AGGTCACTGAAG i cerAty1.NW_012004056v1 I 2 C 0 s chlSab2.chr15 416313 19 - 91754291 CAGTGAC---AGGTCACTGAAG i chlSab2.chr15 I 2 C 0 s manLeu1.NW_012102020v1 574434 19 - 1977891 CAGTGAC---AGGTCACTGAAG i manLeu1.NW_012102020v1 I 2 C 0 s colAng1.NW_012118932v1 452533 19 + 7796314 CAGTGAC---AGGTCACTGAAG i colAng1.NW_012118932v1 I 2 C 0 s calJac3.chr17 935960 22 - 74750902 CAGTGACAGAAGGTCACTGAAG i calJac3.chr17 I 7 C 0 s saiBol1.JH378146 459714 22 + 17725628 CAGTGACAGAAGGTCACTGAAG i saiBol1.JH378146 I 7 C 0 s aotNan1.NW_018503669v1 68576 22 - 69927 CAGTGACAGAAGGTCACTGAAG i aotNan1.NW_018503669v1 I 2 C 0 s micMur3.chr1 25902284 22 - 114275543 CAGTGACAGAAGGTCACTGGAG i micMur3.chr1 I 2 C 0 s proCoq1.NW_012133858v1 7417249 22 + 22200726 CAGTGACAGAAGGTCACTGGAG i proCoq1.NW_012133858v1 I 2 C 0 s mm10.chr16 65430204 20 - 98207768 CCATGGC--AAGGTCACTGAAA i mm10.chr16 I 1 I 221 s dasNov3.JH569502 3892254 18 + 6579706 ----TACAGAAGGTCACAGGGG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 414801 2 - 608964 I e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C a score=13435.000000 s hg38.chr3_KI270779v1_alt 123060 3 + 205312 AAA- s panTro5.chr3 200112233 3 + 202621043 AAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87472 3 + 190779 AAA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51615 3 + 106623 AAA- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860316 3 + 123690457 AAA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460508 3 + 204787373 ACA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67740 3 + 192460366 ACA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543270 3 + 19675229 ACA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482624 3 + 16847902 ACA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416332 3 - 91754291 ACA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574453 3 - 1977891 ACA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452552 3 + 7796314 ACA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 935982 3 - 74750902 AAA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459736 3 + 17725628 AAA- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 68598 3 - 69927 AAG- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902306 3 - 114275543 AAA- i micMur3.chr1 C 0 I 226 s proCoq1.NW_012133858v1 7417271 3 + 22200726 AAA- i proCoq1.NW_012133858v1 C 0 I 313 s dasNov3.JH569502 3892272 3 + 6579706 -GAT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 414801 2 - 608964 I e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C a score=114093.000000 s hg38.chr3_KI270779v1_alt 123063 15 + 205312 CCGGGAGAAGTGGCC s panTro5.chr3 200112236 15 + 202621043 CCGGGAGAAGTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87475 15 + 190779 CCGGGAGAAGTGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51618 15 + 106623 CCGGGAGAAGTGGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860319 15 + 123690457 CCGGGAGAAGTGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460511 14 + 204787373 CC-GGAGAAGTGGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67743 14 + 192460366 CC-GGAGAAGTGGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543273 14 + 19675229 CC-GGAGAAGTGGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482627 14 + 16847902 CC-GGAGAAGTGGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416335 14 - 91754291 CC-GGAGAAGTGGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574456 14 - 1977891 CC-GGAGAAGTGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452555 14 + 7796314 CC-GGAGAAGTGGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 935985 15 - 74750902 TCAGTACAAGTGACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459739 15 + 17725628 TCGGGAGAAGTGATC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018503669v1 68601 15 - 69927 TCAGGACAAATGACC i aotNan1.NW_018503669v1 C 0 C 0 s dasNov3.JH569502 3892275 15 + 6579706 CCAGGAGAAGTGGCC i dasNov3.JH569502 C 0 I 8 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414801 2 - 608964 I e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C a score=61110.000000 s hg38.chr3_KI270779v1_alt 123078 6 + 205312 CTCACC s panTro5.chr3 200112251 6 + 202621043 CTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87490 6 + 190779 CTCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51633 6 + 106623 CTCACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860334 6 + 123690457 CTCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460525 6 + 204787373 CTCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67757 6 + 192460366 CTCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543287 6 + 19675229 CTCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482641 6 + 16847902 CTCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416349 6 - 91754291 CTCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574470 6 - 1977891 CTCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452569 6 + 7796314 CTCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936000 6 - 74750902 CTCACC i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 459754 6 + 17725628 CTCACC i saiBol1.JH378146 C 0 T 56 s aotNan1.NW_018503669v1 68616 6 - 69927 CTCACC i aotNan1.NW_018503669v1 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414801 2 - 608964 I e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C a score=7291.000000 s hg38.chr3_KI270779v1_alt 123084 3 + 205312 CTA s panTro5.chr3 200112257 3 + 202621043 CTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87496 3 + 190779 CTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51639 3 + 106623 CTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860340 3 + 123690457 CTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67763 3 + 192460366 CTA i macFas5.chr2 C 0 I 5 s calJac3.chr17 935950 3 - 74750902 CTC i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 459704 3 + 17725628 CTC i saiBol1.JH378146 T 56 C 0 s aotNan1.NW_018503669v1 68622 3 - 69927 CTA i aotNan1.NW_018503669v1 C 0 I 35 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414801 2 - 608964 I e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e rheMac8.chr2 202460531 0 + 204787373 C a score=28706.000000 s hg38.chr3_KI270779v1_alt 123087 12 + 205312 CATTCCACAGTG s panTro5.chr3 200112260 12 + 202621043 CATTCCACAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87499 12 + 190779 CATTCCACAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51642 12 + 106623 CATTCCACCGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860343 12 + 123690457 CATTCCACAGTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67771 12 + 192460366 CACTCCACTATG i macFas5.chr2 I 5 T 69 s calJac3.chr17 935953 12 - 74750902 CATTCCACAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459707 12 + 17725628 CACTCCACAGTG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 414803 5 - 608964 -------CAGTG i otoGar3.GL873829 I 2 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e rheMac8.chr2 202460531 0 + 204787373 C a score=91914.000000 s hg38.chr3_KI270779v1_alt 123099 44 + 205312 ACAGAAGGTCGCTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA s panTro5.chr3 200112272 44 + 202621043 ACAGAAGGTCGCTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87511 44 + 190779 ACAGAAGGTCGCTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51654 44 + 106623 ACAGAAGGTCGCTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860355 44 + 123690457 ACAGAAGGTCACTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 935965 44 - 74750902 ACAGAAGGTCACTGAAGAAATCAGTACAAGTGACCCTCACCCTA i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 459719 44 + 17725628 ACAGAAGGTCACTGAAGAAATCGGGAGAAGTGATCCTCACCCTA i saiBol1.JH378146 C 0 I 5 s otoGar3.GL873829 414808 41 - 608964 ACAGAAAGTCACTAGAGAAGTCAGAACTGGTCACCCTCACC--- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e macFas5.chr2 67783 69 + 192460366 T e rheMac8.chr2 202460531 0 + 204787373 C a score=13944.000000 s hg38.chr3_KI270779v1_alt 123143 7 + 205312 CATTCCA s panTro5.chr3 200112316 7 + 202621043 CATTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87555 7 + 190779 CATTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51698 7 + 106623 CATTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860399 7 + 123690457 CATTCCA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 935953 7 - 74750902 CATTCCA i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 459768 7 + 17725628 CATTCCA i saiBol1.JH378146 I 5 T 61 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414849 0 - 608964 C e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e macFas5.chr2 67783 69 + 192460366 T e rheMac8.chr2 202460531 0 + 204787373 C a score=2781.000000 s hg38.chr3_KI270779v1_alt 123150 2 + 205312 CA s panTro5.chr3 200112323 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87562 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 51705 2 + 106623 CC i gorGor5.CYUI01000576v1 C 0 I 336 s nomLeu3.chr11 120860406 2 + 123690457 CA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 935960 2 - 74750902 CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459714 2 + 17725628 CA i saiBol1.JH378146 T 61 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414849 0 - 608964 C e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e macFas5.chr2 67783 69 + 192460366 T e rheMac8.chr2 202460531 0 + 204787373 C a score=34969.000000 s hg38.chr3_KI270779v1_alt 123152 18 + 205312 GTGACAGAAGGTCGCTGA s panTro5.chr3 200112325 18 + 202621043 GTGACAGAAGGTCGCTGA i panTro5.chr3 C 0 T 112 s panPan2.chrUn_NW_014024201v1 87564 18 + 190779 GTGACAGAAGGTCGCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52043 18 + 106623 GTGACAGAAGGTCGCTGA i gorGor5.CYUI01000576v1 I 336 C 0 s nomLeu3.chr11 120860408 18 + 123690457 GTGACAGAAGGTCGCTGA i nomLeu3.chr11 C 0 I 105 s calJac3.chr17 935962 18 - 74750902 GTGACAGAAGGTCACTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459716 18 + 17725628 GTGACAGAAGGTCACTGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414849 0 - 608964 C e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e macFas5.chr2 67783 69 + 192460366 T e rheMac8.chr2 202460531 0 + 204787373 C a score=1130.000000 s hg38.chr3_KI270779v1_alt 123170 2 + 205312 GC s panTro5.chr3 200112231 2 + 202621043 AG i panTro5.chr3 T 112 C 0 s panPan2.chrUn_NW_014024201v1 87582 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52061 2 + 106623 AG i gorGor5.CYUI01000576v1 C 0 C 0 s calJac3.chr17 935980 2 - 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459734 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414849 0 - 608964 C e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e macFas5.chr2 67783 69 + 192460366 T e rheMac8.chr2 202460531 0 + 204787373 C e nomLeu3.chr11 120860426 105 + 123690457 I a score=47777.000000 s hg38.chr3_KI270779v1_alt 123172 27 + 205312 AAACCGGGAGAAGTGGCCCTCACCCTA s panTro5.chr3 200112233 27 + 202621043 AAACCGGGAGAAGTGGCCCTCACCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87584 27 + 190779 AAACCGGGAGAAGTGGCCCTCACCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52063 27 + 106623 AAACCGGGAGAAGTGGCCCTCACCCTA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860531 27 + 123690457 AAACCGGGAGAAGTGGCCCTCACCCTA i nomLeu3.chr11 I 105 C 0 s calJac3.chr17 935982 27 - 74750902 AAATCAGTACAAGTGACCCTCACCCTA i calJac3.chr17 C 0 T 56 s saiBol1.JH378146 459736 27 + 17725628 AAATCGGGAGAAGTGATCCTCACCCTA i saiBol1.JH378146 C 0 T 56 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414849 0 - 608964 C e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e cebCap1.NW_016107444v1 424095 0 - 6778120 C e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e macFas5.chr2 67783 69 + 192460366 T e rheMac8.chr2 202460531 0 + 204787373 C a score=58406.000000 s hg38.chr3_KI270779v1_alt 123199 23 + 205312 CATTCCACAGTGACAGAAGGTTG s panTro5.chr3 200112260 23 + 202621043 CATTCCACAGTGACAGAAGGTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87611 23 + 190779 CATTCCACCGTGACAGAAGGTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52090 23 + 106623 CATTCCACCGTGACAGAAGGTCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860558 23 + 123690457 CATTCCACAGTGACAGAAGGTCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67714 20 + 192460366 CATTCCACAGTGAC---AGGTCA i macFas5.chr2 T 69 C 0 s calJac3.chr17 935953 23 - 74750902 CATTCCACAGTGACAGAAGGTCA i calJac3.chr17 T 56 C 0 s saiBol1.JH378146 459707 23 + 17725628 CACTCCACAGTGACAGAAGGTCA i saiBol1.JH378146 T 56 C 0 s cebCap1.NW_016107444v1 424095 23 - 6778120 CATTCCACAGTGACAGAAGGTCA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 414849 4 - 608964 -----------------GGGT-- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e mm10.chr16 65430224 221 - 98207768 I e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e rheMac8.chr2 202460531 0 + 204787373 C a score=15264.000000 s hg38.chr3_KI270779v1_alt 123222 4 + 205312 CTGA s panTro5.chr3 200112283 4 + 202621043 CTGA i panTro5.chr3 C 0 I 56 s panPan2.chrUn_NW_014024201v1 87634 4 + 190779 CTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52113 4 + 106623 CTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860581 4 + 123690457 CTGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67734 4 + 192460366 CTGA i macFas5.chr2 C 0 C 0 s calJac3.chr17 935976 4 - 74750902 CTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459730 4 + 17725628 CTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424118 4 - 6778120 CTGA i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65430445 4 - 98207768 ctta i mm10.chr16 I 221 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414853 0 - 608964 C e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e rheMac8.chr2 202460531 0 + 204787373 C a score=38878.000000 s hg38.chr3_KI270779v1_alt 123226 15 + 205312 AGAAACCGGGAGAAG s panTro5.chr3 200112343 15 + 202621043 AGAAACCGGGAGAAG i panTro5.chr3 I 56 C 0 s panPan2.chrUn_NW_014024201v1 87638 15 + 190779 AGAAACCGGGAGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52117 15 + 106623 AGAAACCGGGAGAAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860585 15 + 123690457 AGAAACCGGGAGAAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67738 14 + 192460366 AGACACC-GGAGAAG i macFas5.chr2 C 0 C 0 s calJac3.chr17 935980 15 - 74750902 AGAAATCAGTACAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459734 15 + 17725628 AGAAATCGGGAGAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424122 15 - 6778120 AGAAATCAGGAGAAG i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65430449 15 - 98207768 agagtttgaagcaaa i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414853 0 - 608964 C e dasNov3.JH569502 3892290 8 + 6579706 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e rheMac8.chr2 202460531 0 + 204787373 C a score=29199.000000 s hg38.chr3_KI270779v1_alt 123241 11 + 205312 TGGCCCTCACG s panTro5.chr3 200112358 11 + 202621043 TGGCCCTCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87653 11 + 190779 TGGCCCTCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52132 11 + 106623 TGGCCCTCACG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860600 11 + 123690457 TGGCCCTCACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67752 11 + 192460366 TGGCCCTCACC i macFas5.chr2 C 0 C 0 s calJac3.chr17 935995 11 - 74750902 TGACCCTCACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459749 11 + 17725628 TGATCCTCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424137 11 - 6778120 TGGCCCTCACC i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65430464 10 - 98207768 tctctctcca- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3892298 11 + 6579706 TGACTTGCACA i dasNov3.JH569502 I 8 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e otoGar3.GL873829 414853 0 - 608964 C e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I e macNem1.NW_012014355v1 543293 0 + 19675229 C e colAng1.NW_012118932v1 452575 0 + 7796314 C e manLeu1.NW_012102020v1 574476 0 - 1977891 C e chlSab2.chr15 416355 0 - 91754291 C e cerAty1.NW_012004056v1 482647 0 + 16847902 C e rheMac8.chr2 202460531 0 + 204787373 C a score=235236.000000 s hg38.chr3_KI270779v1_alt 123252 38 + 205312 CTAGGGCTCACTCCACTATGCTCCGGGCCTCCCCAGCG s panTro5.chr3 200112369 38 + 202621043 CTAGGACTCACTCCACTATGCTCCGGGCCTCCCCAGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87664 38 + 190779 CTAGGACTCACTCCACTATGCTCCGGACCTCCCCAGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52143 38 + 106623 CTAGGGCTCACTCCACTATGCTCCGGGCCTCCCCAGCG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860611 38 + 123690457 CTAGCGCTCACTCCACTATGCTCCGGACCTCCCCGACG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460531 37 + 204787373 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67763 37 + 192460366 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543293 37 + 19675229 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482647 37 + 16847902 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416355 37 - 91754291 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574476 37 - 1977891 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCCGCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452575 37 + 7796314 CTAGCGCTCACTCCACTGTGCCGCGGGCCT-CCCGCCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936006 38 - 74750902 CTAGTGCTCATTCAGTTGTGGTTAGGGCCTCCCTGACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459760 28 + 17725628 CTAGTGCTCATTCCATTCTGGTCAGGGC---------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424148 38 - 6778120 CTAGTGCTCATTCCCTTCTGGTCAGGGTCTCCCTGACT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 414853 33 - 608964 ----GGCTCGCTCTACT-TGCCCAGAGCTTCCCTGACT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430474 34 - 98207768 ctgaaatcccctc---tctgtgctggaact-tctacct i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3892309 37 + 6579706 CTCGTGTTCATTCTACTATGGGCAGGGGTCCCTGGCC- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68625 35 - 69927 I a score=1503035.000000 s hg38.chr3_KI270779v1_alt 123290 151 + 205312 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCGTGGTCCTTGCCGTGACAGCTTGCCTCGCCAGCTCCCATAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCTGGAGCTCTGTCCTGT s panTro5.chr3 200112407 138 + 202621043 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCGTGGTCCTTGCC-------------TCGCCAGCTCCCACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCTGGAGCTCTGTCCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87702 138 + 190779 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCGTGGTCCTTGCC-------------TCGCCAGCTCCCACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCTGGAGCTCTGTCCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52181 151 + 106623 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCGTGGTCCTTGCCGTGACAGCTTGCCTCGCCAGCTCCCACAGCCCGCATCTTA-C-ACCATCCCAGAGAAATCTGGAGCTCTGTCCTGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860649 151 + 123690457 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCATGGTCCTTGCCATGACAGCTTTCCTCGCCAGCTCCCATAGCCTGCACCTTA-C-ACCGTCCCAGAGAAATCTGGAGCTCTGTCCTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460568 149 + 204787373 CTCATCTCACTGAGCCAGCTGTGAAGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCGCCAGCTCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAG--CTGTCCTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 67800 149 + 192460366 CTCATCTCACTGAGCCAGCTGTGAAGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCGCCAGCTCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAG--CTGTCCTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543330 149 + 19675229 CCCATCTCACTGAGCCAGCTGTGAAGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCGCCAGCCCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAG--CTGTCCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482684 151 + 16847902 CTCATCTCACTGAGCCAGCTGTGAAGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCCCCTGCTCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAGCTCTGTCCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416392 149 - 91754291 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTTCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTGGCCAGCTCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAG--CTGTCCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574513 151 - 1977891 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCCCCTGCTCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAGCTCTGTCCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452612 151 + 7796314 CTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCAGACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCCCGCCAGCTCCTACAGCCCGCACCTTA-C-ACCATCCCAGAGAAATCCGGAGCTCTGTCCTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936044 150 - 74750902 GTCTTCTCCCTGAGCCAGCCATGAGGTC------------------------------------------------------------------------TCTGCCTCCACCCTTCCTCAGAAGGTC-CACAGGCCCACGGTCCTTGCCGTGACAGCTGCCCTCGCCAGCTCCCGCAGCCCACACCTTA-C-CCCATCCCAGAGAAACCTGGAGCTCTGTGCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459788 145 + 17725628 -----CTCCCTGAGCCAGCTATGAGGTC------------------------------------------------------------------------TCTGCCTCCACCCTTCCTCAGTAGGTC-CACAGGCCCATGGTCCTCGCCGTGACAGCGGCCCTCACCAGCTCCCGCAGCCCACACCTTA-C-AGCATCCCAGAGAAACCCGGAGCTCTGTGCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424186 150 - 6778120 CTCATCTACCTGAGCCAGCTATGAGGTC------------------------------------------------------------------------TCTGCCTCCACCCTTCCTCAGTAGGTC-CACAAGCCCATGGTCCTCGCCGTGACAGCGGCCCTCACCAGCTCCCGCAGCCCACACCTTA-C-AGCACCCCAGAGAAGCCTGGAGCTCTGTGCCGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68660 130 - 69927 CTCATCTCCCTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCACCCTTCCTCAGGAGGTC-CACAGGCTCATGGTCCGCGCCGTGACAGCTGTCGTCGCCGGCCCCCGCAGCCCACACCTTA-C-ACCGTCCCAGAGA-------------------- i aotNan1.NW_018503669v1 I 35 C 0 s otoGar3.GL873829 414886 148 - 608964 CTTATCTGGCTGAACC----TCGAAATG------------------------------------------------------------------------CCTGCTGCAGTCTTTTCTCCGCAGAGTGCATAAGCCCGTGGTCCACGCTGTGACAGTGGCCCTCACCAGCTCCCACAGCCTATGACTTACC-ACCACCCAAGAGAAATCCAGAATTCTGCCTGGC i otoGar3.GL873829 C 0 I 21 s mm10.chr16 65430509 208 - 98207768 cctatttc-ctgcctaagctaggaggccaacagcgtcttattgacacttgatgcttccacacgatgcacaagagattctctctacaCTGCCGAGGCTTCTTCTGCCTCCGTCTGTCCTCTGCAGATGACCAAGGCCGGTGGTTCACACTGGGAGAGCTCTCCTCATCATGTCCTCCAGCCCCAAACT---C-ACCACCTCAG------------TTCTGATCTGT i mm10.chr16 I 1 I 16 s dasNov3.JH569502 3892346 145 + 6579706 CTCATCTTGCTGAGGG----GCAAGATT------------------------------------------------------------------------TC--CTTCTGTCTTTCCTCAGCAAACTGGGCAG-CCCATGGTTCATGTGGAGACAGCTGTCACCATCAGCTCCCATGGCCTACATTTGA-CTATCACCTGAGAGAGATTTGGAATTCTGCCTTAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902309 226 - 114275543 I e canFam3.chr33 29068097 113 + 31377067 I a score=191793.000000 s hg38.chr3_KI270779v1_alt 123441 15 + 205312 ----------------------GACCCCAGA-----GCTTCC s panTro5.chr3 200112545 15 + 202621043 ----------------------GACCCCAGA-----GCTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87840 15 + 190779 ----------------------GACCCCAGA-----GCTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52332 15 + 106623 ----------------------GACCCCAGA-----GCTTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860800 15 + 123690457 ----------------------GACCCCAGA-----GCTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460717 15 + 204787373 ----------------------GACCCCAGA-----GCTTCC i rheMac8.chr2 C 0 I 21 s macFas5.chr2 67949 15 + 192460366 ----------------------GACCCCAGA-----GCTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543479 15 + 19675229 ----------------------GACCCCAGA-----GCTTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482835 15 + 16847902 ----------------------GACCCCAGA-----GCTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416541 15 - 91754291 ----------------------GACCCCAGA-----GTTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574664 15 - 1977891 ----------------------GACCCCAGA-----GCTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452763 15 + 7796314 ----------------------GACCCCAGA-----GCTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936194 14 - 74750902 ----------------------G-TCCCAGA-----GCTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459933 15 + 17725628 ----------------------GACCCCAGA-----GCTTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424336 15 - 6778120 ----------------------GACCCCAGA-----GCGTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68790 13 - 69927 ------------------------CCCCAGA-----GCTTCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902535 15 - 114275543 ----------------------GACCCCAGA-----GTTCCC i micMur3.chr1 I 226 C 0 s otoGar3.GL873829 415055 15 - 608964 ----------------------GACCCCAGA-----GTTTCC i otoGar3.GL873829 I 21 C 0 s mm10.chr16 65430733 20 - 98207768 ----------------------GACCTCAGACACTGGTTTTC i mm10.chr16 I 16 C 0 s dasNov3.JH569502 3892491 37 + 6579706 GAGTTTGAGGAACTTAGCCTTGGGGGCCAGA-----GTCTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e canFam3.chr33 29068097 113 + 31377067 I a score=65319.000000 s hg38.chr3_KI270779v1_alt 123456 5 + 205312 TCATC s panTro5.chr3 200112560 5 + 202621043 TCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87855 5 + 190779 TCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52347 5 + 106623 CCATC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860815 5 + 123690457 TCATC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67964 5 + 192460366 CCATC i macFas5.chr2 C 0 I 16 s macNem1.NW_012014355v1 543494 5 + 19675229 CCATC i macNem1.NW_012014355v1 C 0 I 16 s cerAty1.NW_012004056v1 482850 5 + 16847902 CCATC i cerAty1.NW_012004056v1 C 0 I 16 s chlSab2.chr15 416556 5 - 91754291 CCATC i chlSab2.chr15 C 0 I 16 s manLeu1.NW_012102020v1 574679 5 - 1977891 CCATC i manLeu1.NW_012102020v1 C 0 I 16 s colAng1.NW_012118932v1 452778 5 + 7796314 CCATC i colAng1.NW_012118932v1 C 0 I 16 s calJac3.chr17 936208 5 - 74750902 CCATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459948 5 + 17725628 CCATC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424351 5 - 6778120 CCATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68803 5 - 69927 CTGTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902550 5 - 114275543 TCATC i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 415070 5 - 608964 TCATC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430753 5 - 98207768 CCATC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3892528 5 + 6579706 CCACC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e canFam3.chr33 29068097 113 + 31377067 I e rheMac8.chr2 202460732 21 + 204787373 I a score=191454.000000 s hg38.chr3_KI270779v1_alt 123461 15 + 205312 TTCCCCAAAGGTGGG s panTro5.chr3 200112565 15 + 202621043 TTCCCCAAAGGTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87860 15 + 190779 TTCCCCAAAGGTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52352 15 + 106623 TTCCCCAAAGGTGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860820 15 + 123690457 TTCTCCAAAGGTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460753 15 + 204787373 TTCCCCAAAGGTGGG i rheMac8.chr2 I 21 C 0 s macFas5.chr2 67985 15 + 192460366 TTCCCCAAAGGTGGG i macFas5.chr2 I 16 C 0 s macNem1.NW_012014355v1 543515 15 + 19675229 TTCCCCAAAGGTGGG i macNem1.NW_012014355v1 I 16 C 0 s cerAty1.NW_012004056v1 482871 15 + 16847902 TTCCCCAAAGGCGGG i cerAty1.NW_012004056v1 I 16 C 0 s chlSab2.chr15 416577 15 - 91754291 TTCCCCAAAGGTGGG i chlSab2.chr15 I 16 C 0 s manLeu1.NW_012102020v1 574700 15 - 1977891 TTCCCTAAAGGTGGG i manLeu1.NW_012102020v1 I 16 C 0 s colAng1.NW_012118932v1 452799 15 + 7796314 TTCCCCAAAGGTGGG i colAng1.NW_012118932v1 I 16 C 0 s calJac3.chr17 936213 15 - 74750902 ATCCCCAAAGGTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459953 14 + 17725628 TTCCCCAAAGGCGG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424356 15 - 6778120 TTCCCCAAAGGTGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68808 15 - 69927 TTCCCCAAAGGCGGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902555 15 - 114275543 TCCCCCAAAGGTGGG i micMur3.chr1 C 0 I 52 s otoGar3.GL873829 415075 10 - 608964 TGCCCCAAAG----- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430758 15 - 98207768 ATCCCCATATACGAG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3892533 11 + 6579706 TTCCCCAAAGG---- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e canFam3.chr33 29068097 113 + 31377067 I a score=49168.000000 s hg38.chr3_KI270779v1_alt 123476 7 + 205312 CGGAGTG s panTro5.chr3 200112580 7 + 202621043 CGGAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87875 7 + 190779 CGGAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52367 7 + 106623 CGGAGTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860835 7 + 123690457 CGGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460768 7 + 204787373 AGGAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68000 7 + 192460366 AGGAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543530 7 + 19675229 AGGAGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482886 7 + 16847902 AGGAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416592 7 - 91754291 AGGAGCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574715 7 - 1977891 AGGAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452814 7 + 7796314 AGGAGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936228 7 - 74750902 AAGAGTG i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 424371 7 - 6778120 AGAAGTG i cebCap1.NW_016107444v1 C 0 I 14 s aotNan1.NW_018503669v1 68823 7 - 69927 AGGAATG i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65430773 5 - 98207768 --AGACG i mm10.chr16 C 0 I 2 s dasNov3.JH569502 3892544 3 + 6579706 ----ATA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e otoGar3.GL873829 415085 0 - 608964 C e canFam3.chr33 29068097 113 + 31377067 I e saiBol1.JH378146 459967 0 + 17725628 C a score=3364.000000 s hg38.chr3_KI270779v1_alt 123483 1 + 205312 C s panTro5.chr3 200112587 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87882 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52374 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860842 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460775 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68007 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543537 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482893 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416599 1 - 91754291 T i chlSab2.chr15 C 0 I 294 s manLeu1.NW_012102020v1 574722 1 - 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452821 1 + 7796314 T i colAng1.NW_012118932v1 C 0 I 21 s calJac3.chr17 936235 1 - 74750902 C i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 68830 1 - 69927 C i aotNan1.NW_018503669v1 C 0 C 0 s mm10.chr16 65430780 1 - 98207768 T i mm10.chr16 I 2 C 0 s dasNov3.JH569502 3892547 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e otoGar3.GL873829 415085 0 - 608964 C e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424378 14 - 6778120 I e saiBol1.JH378146 459967 0 + 17725628 C a score=51590.000000 s hg38.chr3_KI270779v1_alt 123484 9 + 205312 GGGGGTGAG s panTro5.chr3 200112588 9 + 202621043 GGGGGTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87883 9 + 190779 GGGGGTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52375 9 + 106623 GGGGGTGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860843 9 + 123690457 GGAGGCAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460776 9 + 204787373 GGAGGTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68008 9 + 192460366 GGAGGTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543538 9 + 19675229 GGAGGTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482894 9 + 16847902 GGGGGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416894 9 - 91754291 GGGGGTGAG i chlSab2.chr15 I 294 C 0 s manLeu1.NW_012102020v1 574723 9 - 1977891 GGAGGTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452843 9 + 7796314 GGGGATGAG i colAng1.NW_012118932v1 I 21 C 0 s calJac3.chr17 936236 8 - 74750902 AATGGTGA- i calJac3.chr17 C 0 C 0 s aotNan1.NW_018503669v1 68831 9 - 69927 AGAGGTGAG i aotNan1.NW_018503669v1 C 0 I 13 s otoGar3.GL873829 415085 4 - 608964 -----TGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430781 8 - 98207768 GGGGCTGG- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3892548 5 + 6579706 GAGGG---- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e canFam3.chr33 29068097 113 + 31377067 I e cebCap1.NW_016107444v1 424378 14 - 6778120 I e saiBol1.JH378146 459967 0 + 17725628 C a score=-10878.000000 s hg38.chr3_KI270779v1_alt 123493 23 + 205312 AGGGTGGGGCCCAGGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGC s panTro5.chr3 200112597 23 + 202621043 AGGGTGGGGCCCGGGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87892 23 + 190779 AGGGTGGGGCCCGGGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52384 23 + 106623 AGGGTGGGGCCCGGGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120860852 23 + 123690457 AGGGTGGGGCCCGGGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGC i nomLeu3.chr11 C 0 I 9614 s rheMac8.chr2 202460785 119 + 204787373 AGGGCGGGGCCCGGGTGGGGCGCAGGGGTAAGAGGGCGGAGCCTGGGTGGGGTGCGGGGGTAAGAAGGCGGAGCCTGGATGGGG-----------------------------------------------------------TGTGAGGGTGAGAGGGCGGGGCCTGGGTAGAGTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68017 119 + 192460366 AGGGCGGGGCCCGGGTGGGGCGCA-----------------------------------------------------------GGGGTAAGAGGGCGGAGCCTGGGTGGGGTGCGGGGGTAAGAAGGTGGAGCCTGGCTGGGGTGCGAGGGTGAGAGGGCGGGGCCTGGGTAGAGTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543547 23 + 19675229 AGGGCGGGGCCCGGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482903 23 + 16847902 AGGGCGGGGCCTGGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416903 23 - 91754291 AGGGCGGGGCCTGGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574732 23 - 1977891 AGGGCGTGGCCCCGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452852 23 + 7796314 AGGGCGGGGCCCGGGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 415089 7 - 608964 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430789 10 - 98207768 -----------CAGGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------CAGT-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3892553 14 + 6579706 -GTGTAGAGACAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68840 13 - 69927 I e cebCap1.NW_016107444v1 424378 14 - 6778120 I e calJac3.chr17 936244 0 - 74750902 C e saiBol1.JH378146 459967 0 + 17725628 C a score=63505.000000 s hg38.chr3_KI270779v1_alt 123516 11 + 205312 GGGGGTGAGAG s panTro5.chr3 200112620 11 + 202621043 GGGGGTGAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87915 11 + 190779 GGGGGTGAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52407 11 + 106623 GGGGGTGAGAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870489 11 + 123690457 AGGGGTGAGAG i nomLeu3.chr11 I 9614 C 0 s rheMac8.chr2 202460904 11 + 204787373 GGAGGTGAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68136 11 + 192460366 GGAGGTGAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543570 11 + 19675229 AGGGGTAAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482926 11 + 16847902 GGGGGTGAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416926 11 - 91754291 GGGGGTGAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574755 11 - 1977891 AGGGGTGAGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452875 11 + 7796314 GGGAGTGAGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936244 6 - 74750902 --GGGTGG--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459967 6 + 17725628 --GGATGG--- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 415096 11 - 608964 GGAGGTGGGGA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e mm10.chr16 65430799 0 - 98207768 C e dasNov3.JH569502 3892567 0 + 6579706 C e canFam3.chr33 29068097 113 + 31377067 I e aotNan1.NW_018503669v1 68840 13 - 69927 I e cebCap1.NW_016107444v1 424378 14 - 6778120 I a score=13715.000000 s hg38.chr3_KI270779v1_alt 123527 2 + 205312 GG s panTro5.chr3 200112631 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87926 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52418 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870500 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460915 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68147 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543581 2 + 19675229 GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482937 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416937 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574766 2 - 1977891 GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 452886 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 415107 2 - 608964 TA i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 29068210 2 + 31377067 GG i canFam3.chr33 I 113 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e mm10.chr16 65430799 0 - 98207768 C e dasNov3.JH569502 3892567 0 + 6579706 C e aotNan1.NW_018503669v1 68840 13 - 69927 I e cebCap1.NW_016107444v1 424378 14 - 6778120 I e calJac3.chr17 936250 0 - 74750902 C e saiBol1.JH378146 459973 0 + 17725628 C a score=12000.000000 s hg38.chr3_KI270779v1_alt 123529 1 + 205312 C s panTro5.chr3 200112633 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87928 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52420 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870502 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460917 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68149 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543583 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 482939 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416939 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 574768 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 I 927 s colAng1.NW_012118932v1 452888 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936250 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459973 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424392 1 - 6778120 C i cebCap1.NW_016107444v1 I 14 C 0 s canFam3.chr33 29068212 1 + 31377067 C i canFam3.chr33 C 0 I 1 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e otoGar3.GL873829 415109 3 - 608964 I e mm10.chr16 65430799 0 - 98207768 C e dasNov3.JH569502 3892567 0 + 6579706 C e aotNan1.NW_018503669v1 68840 13 - 69927 I a score=11854.000000 s hg38.chr3_KI270779v1_alt 123530 2 + 205312 GG s panTro5.chr3 200112634 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87929 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52421 2 + 106623 GG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870503 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460918 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68150 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543584 2 + 19675229 GG i macNem1.NW_012014355v1 C 0 I 345 s cerAty1.NW_012004056v1 482940 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 416940 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 452889 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 I 103 s calJac3.chr17 936251 2 - 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459974 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424393 2 - 6778120 AG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 415112 2 - 608964 GG i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 29068214 1 + 31377067 A- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3892567 2 + 6579706 GG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e mm10.chr16 65430799 0 - 98207768 C e aotNan1.NW_018503669v1 68840 13 - 69927 I e manLeu1.NW_012102020v1 574769 927 - 1977891 I a score=9745.000000 s hg38.chr3_KI270779v1_alt 123532 2 + 205312 -GG s panTro5.chr3 200112636 2 + 202621043 -GG i panTro5.chr3 C 0 I 31 s panPan2.chrUn_NW_014024201v1 87931 2 + 190779 -GG i panPan2.chrUn_NW_014024201v1 C 0 I 31 s gorGor5.CYUI01000576v1 52423 2 + 106623 -GG i gorGor5.CYUI01000576v1 C 0 I 32 s nomLeu3.chr11 120870505 2 + 123690457 -GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460920 2 + 204787373 -GG i rheMac8.chr2 C 0 I 25 s macFas5.chr2 68152 2 + 192460366 -GG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 482942 2 + 16847902 -GG i cerAty1.NW_012004056v1 C 0 I 122 s chlSab2.chr15 416942 2 - 91754291 -GG i chlSab2.chr15 C 0 I 186 s calJac3.chr17 936253 2 - 74750902 -GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459976 2 + 17725628 -GG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424395 2 - 6778120 -GG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 415114 2 - 608964 -AG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29068215 2 + 31377067 -GG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3892569 2 + 6579706 CA- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e mm10.chr16 65430799 0 - 98207768 C e aotNan1.NW_018503669v1 68840 13 - 69927 I e macNem1.NW_012014355v1 543586 345 + 19675229 I e colAng1.NW_012118932v1 452891 103 + 7796314 I e manLeu1.NW_012102020v1 574769 927 - 1977891 I a score=2656.000000 s hg38.chr3_KI270779v1_alt 123534 3 + 205312 TCT s panTro5.chr3 200112669 3 + 202621043 TCT i panTro5.chr3 I 31 C 0 s panPan2.chrUn_NW_014024201v1 87964 3 + 190779 TCT i panPan2.chrUn_NW_014024201v1 I 31 C 0 s gorGor5.CYUI01000576v1 52457 3 + 106623 TCT i gorGor5.CYUI01000576v1 I 32 C 0 s nomLeu3.chr11 120870507 3 + 123690457 TCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 68154 1 + 192460366 --C i macFas5.chr2 C 0 C 0 s calJac3.chr17 936255 3 - 74750902 CAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459978 3 + 17725628 CAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424397 3 - 6778120 TAT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 415116 3 - 608964 CAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29068217 1 + 31377067 --C i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3892571 3 + 6579706 CAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e mm10.chr16 65430799 0 - 98207768 C e aotNan1.NW_018503669v1 68840 13 - 69927 I e macNem1.NW_012014355v1 543586 345 + 19675229 I e colAng1.NW_012118932v1 452891 103 + 7796314 I e manLeu1.NW_012102020v1 574769 927 - 1977891 I e chlSab2.chr15 416944 186 - 91754291 I e cerAty1.NW_012004056v1 482944 122 + 16847902 I e rheMac8.chr2 202460922 25 + 204787373 I a score=12772.000000 s hg38.chr3_KI270779v1_alt 123537 2 + 205312 CT s panTro5.chr3 200112672 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87967 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52460 2 + 106623 CT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870510 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 68155 2 + 192460366 CT i macFas5.chr2 C 0 I 22 s calJac3.chr17 936258 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459981 2 + 17725628 CC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424400 2 - 6778120 CT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68853 2 - 69927 CT i aotNan1.NW_018503669v1 I 13 C 0 s otoGar3.GL873829 415119 2 - 608964 CT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430799 1 - 98207768 -T i mm10.chr16 C 0 C 0 s canFam3.chr33 29068220 2 + 31377067 CC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3892574 2 + 6579706 CT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I e macNem1.NW_012014355v1 543586 345 + 19675229 I e colAng1.NW_012118932v1 452891 103 + 7796314 I e manLeu1.NW_012102020v1 574769 927 - 1977891 I e chlSab2.chr15 416944 186 - 91754291 I e cerAty1.NW_012004056v1 482944 122 + 16847902 I e rheMac8.chr2 202460922 25 + 204787373 I a score=210909.000000 s hg38.chr3_KI270779v1_alt 123539 19 + 205312 GGCGGTACCTAGGTTGACA s panTro5.chr3 200112674 19 + 202621043 GGCCATACCTAGGTTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87969 19 + 190779 GGCCGTACCTAGGTTGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52462 19 + 106623 GGCGGTACCTAGGTTGACA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870512 19 + 123690457 GGCAGTACCTAGGTTGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460947 19 + 204787373 GGCGGTACCTAGGTGGACA i rheMac8.chr2 I 25 C 0 s macFas5.chr2 68179 19 + 192460366 GGCGGTACCTAGGTGGACA i macFas5.chr2 I 22 C 0 s macNem1.NW_012014355v1 543931 19 + 19675229 GGCGGTACCTAGGTGGACA i macNem1.NW_012014355v1 I 345 C 0 s cerAty1.NW_012004056v1 483066 19 + 16847902 GGCGGTACCTAGGTGGACA i cerAty1.NW_012004056v1 I 122 C 0 s chlSab2.chr15 417130 19 - 91754291 GGCGGTACCTAGGTGGACA i chlSab2.chr15 I 186 C 0 s manLeu1.NW_012102020v1 575696 19 - 1977891 GGCGGTACCTAGGTGGACA i manLeu1.NW_012102020v1 I 927 C 0 s colAng1.NW_012118932v1 452994 19 + 7796314 GGCGGTACCTAGGTGGACA i colAng1.NW_012118932v1 I 103 C 0 s calJac3.chr17 936260 19 - 74750902 GGTGGTACCTAGGCGGACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 459983 19 + 17725628 GGTGGTACCTGGGCTGACG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424402 19 - 6778120 GGTGGTACCCAGGCTGACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68855 19 - 69927 GGTGGTACCTAGGCTGATG i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 415121 19 - 608964 GGTGCTACCTGGACTCGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430800 19 - 98207768 AGCCATACCCATAGAGATG i mm10.chr16 C 0 C 0 s canFam3.chr33 29068222 19 + 31377067 GGTGGTACCTGCAGGGGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3892576 19 + 6579706 CGACGTACCTAGCTTGATG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417274 313 + 22200726 I e micMur3.chr1 25902570 52 - 114275543 I a score=3371150.000000 s hg38.chr3_KI270779v1_alt 123558 193 + 205312 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGCGGCTGTCAGTGAAGGCTGGGGGGCAGGTGCACATGGGCTGACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCTGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGT---CAG s panTro5.chr3 200112693 193 + 202621043 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGCGGCTGTCAGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGT---CAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 87988 193 + 190779 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGCGGCTGTCAGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGT---CAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52481 193 + 106623 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGCGGCTGTCAGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGT---CAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870531 190 + 123690457 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTGTCGGTGAAGGCCGGGGGACAGATGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGT------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202460966 193 + 204787373 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCATGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGT---CAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68198 193 + 192460366 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGT---CAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 543950 193 + 19675229 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGT---CAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483085 193 + 16847902 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGT---CAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417149 193 - 91754291 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGT---CAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 575715 193 - 1977891 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCACGTCGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGT---CAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453013 193 + 7796314 GTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCCGGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAAAGAGCTCCCCGGAGCTGCAGAGTGAGCAGGGAGGT---CAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936279 196 - 74750902 GTCGGAGTGAAGTTGTTTCCAGCCAGGAGGCAGCGGCTATCGGTGAAGGCTGGGGGGCAGGTGCACGAGGGCCGGCAGCCCAGAGCCTCAGAGATATAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACAGAGGGAAGAGCTGCCCAGAGCTGCAGAGGGAGCAGGGAGGTCAGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460002 193 + 17725628 GTCGGAGTGAAGTTGTTTCCAGCCAGGAGGCAGTGGCCATCGGTGAAGGCTGGGGGGCAGGTGCAGGAGGGCCGGCAGCCCAGAGCCTCGGAGATGTAGCAGTGGCCTTGATTGTGGCAATAATTCATGGGGCAGGACTGGTTCCGACAGAGGGAAGAGCTGCCCAGAGCTGCAGAAGGAGCAGGGAGGT---CAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424421 193 - 6778120 GTCGGAGTGAAGTTGTTTCCAGCCAGGAGGCAGTGGCTGTCGGTGAAGGCTGGGGGGCAGGTGCACGAGGGCTGGCAGCCCAGAGCCTCGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACAGAGGGGAGAGCTGCCCAGAGCTGCAGAGGGAGCAGGGAGGT---CAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 68874 191 - 69927 GTCGGAGTAAAGTTGTTTCCAGCCAGGAGGCAGCGGCTGTCGGTGAAGGCTGGGGGGCAGGTGCATGAGGGCTGGCAGCCCAGAGCCTCGGAGATGTAGCAGTGGCCTTGATTATAGCAGTAATTCACAGGGCAGGACTGGTTCCGACAGAGGGAAGAGCTGCCCAGAGCTGCGGAGGGAGC--GGAGGT---CAG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902622 193 - 114275543 GTTGGAGTGAAGTTGTTCCCAGCCAGGAAGCAGCGGGTGTCGGTGAAGGCCGGGGGGCAGGTACATGTGGGTTCACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCGTGGTTGTAGCAGTAGTTCACAGGACAAGACTTGTTCTGACAGAGGAAAGAGTTCTCCAGAGCTGCAGAGGGAACAGGGAGGT---CAG i micMur3.chr1 I 52 I 110 s proCoq1.NW_012133858v1 7417587 193 + 22200726 GTTGGAGTGAAGTTGTTCCCAGCCAGGAAGCAGCGGGTGTCGGTGAAGGCCGGGGGGCAGGTACACATGGGTTCGCAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCGTGGTTGTAGCAGTAGTTCACAGGACAGGACTTGTTCTGACAGAGGAAAGAGTTCTCCAGAGCTGCAGATGGAGGAAGGAGGT---CAG i proCoq1.NW_012133858v1 I 313 I 107 s otoGar3.GL873829 415140 193 - 608964 GTTGGAGCAAAGTTGTTCCCAGCCAGCAAGCAGCGACTGTCAGTGAAGGCTGGGGGGCAGGTGCACGCAGGCTGGCAGCCTAGAGTCTGGGAGATGTAGCAGTGGCCATGGTTGTAGCAGTAATTCACAGGACAGGACCGGTTCTGACAGAGGATAGAGTTCTCCAGAGCTGCAGAGGGAACAGGGAAAT---TAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65430819 187 - 98207768 GTGGGAGTGAAACTGTTCCCAGCCAGGAAGCAGCGGTTATCAGTGAAGGCAGGGGGACAGGTGCAAGTGGGCTGGCAGCCTGGAGCCTCAGAGATGTCGCAATGGCCATTGTTATAGCAGTAATTCATGGGACAGGAACGGTTTGGGCA------GGAGTCCTCCAGAGCTGTAAAGGGAGAAGGGGAAT---CAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29068241 184 + 31377067 GCCGGAGTGAAGGGGTTCCCCGCCACCAGGCAGCGGCTGTCCGAGAAGGCGGGGTGGCAGGTGCAGGCCGGCTGGCAGTCCCTCTCGGGGGACACGTGGCAGTGGCCCCGGTTGTAGCAGTAACTGGCGGGGCAGGACCGGTTCCCACAGTGCAGCCCGGGGGCCAGAGCTGCGGAGGGAGGAG------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3892595 193 + 6579706 GTTGGAGTGAAGTTGTTCCCAGCCAGGAAGCAGCGGGTGTCGGTGAAGGCTGGGGGGCAGGTACAGGTGGGCTCGCAGCCCTGTGTCTGGGAGAGGGAGCAGTGGCCGTGGTTGTAGCAGTAATTCACTGGACAGGACTTGTTCTGACAGAGGACAAAGTTCTCCAGAGCTACTGTGGGAGGAGGGAGGT---TAG i dasNov3.JH569502 C 0 C 0 a score=604866.000000 s hg38.chr3_KI270779v1_alt 123751 86 + 205312 CAGCAGCGCGCA--GGGCAGCAGAGGG-----------------ACGG-----C---CCAGCCCGTGGAAACCCGCTCC--GGGACA----GGCTTGCTTTC--------CCC--C----------------AGTG--------------TTCCACTTC- s panTro5.chr3 200112886 86 + 202621043 CAGCAGCGCGCT--GGGCAGCAGAGGG-----------------ACAG-----C---CCAGCCCGTGGAAACCCGCTCC--GGGACA----GGCTTGCTTTC--------CCC--C----------------AGTG--------------TTCCGCTTC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88181 86 + 190779 CAGCAGCGCGCT--GGGCAGCAGAGGG-----------------ACAG-----C---CCAGCCCGTGGAAACCCGCTCC--GGGACA----GGCTTGCTTTC--------CCC--C----------------AGTG--------------TTCCGCTTC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52674 86 + 106623 CAGCAGCGCGCT--GGACAGCAGAGGG-----------------ACAG-----C---CCAGCCCGTGGAAACCCGCTCC--GGGACA----GGCTTGCTTTC--------CCC--C----------------AGTG--------------TTCCGCTTC- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870721 75 + 123690457 CAGCAGCGCGCT--GGGGAGCAGAGGG-----------------ACAG-----C---CCAGCCCGTGGAAACCCGCTCC--GGGACA----GGCCTGCTTTC--------------------------------TT--------------TCCC------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461159 91 + 204787373 CAGCAGCGCACT-GGGGCAGCGGAGGG-----------------AGAG-----C---CCAGCCCGTGGAAACCCGCTCT--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGTG--------------TTCTGCTGT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68391 91 + 192460366 CAGCAGCGCACT-GGGGCAGCGGAGGG-----------------AGAG-----C---CCAGCCCGTGGAAACCCGCTCT--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGTG--------------TTCTGCTGT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544143 91 + 19675229 CAGCAGCGCACT-GGGGCAGCGGAGGG-----------------AGAG-----C---CCAGCCCGTGGAAACCCGCTCT--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGTG--------------TTCTGCTGT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483278 91 + 16847902 CAGCAGCGCACT-GGGGCAGCGGAGGG-----------------AGAG-----C---CCAGCCCGTGGAAACCCGCTCT--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGCG--------------TTCTGCTGT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417342 91 - 91754291 CAGCAGCGCACC-GGGGCAGCGGAGGG-----------------AGAG-----C---CCAGCCCGTGGAAACCTGCTCC--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGTG--------------TTCTGCTGT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 575908 91 - 1977891 CAGCAGCGCACT-GGGGCAGCGGAGGG-----------------AGAG-----C---CCAGCCCGTGGAAACCCGCTCT--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGCG--------------TTCTGCTGT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453206 91 + 7796314 CAGCAGCGCACT-GGGGCAGCAGAGGG-----------------AGAG-----T---CCAGCCCGTGGAAACCCGCTCC--GGGACA----GGCCTGCTTTCT----TTCCCC--C----------------AGTG--------------TTCTGCGGT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936475 88 - 74750902 CAGCAGC-------AGGCAGCAGAGGG-----------------AGAG-----CCCAGCAGCCGGTGGAAACCTGCTCT--GGGACA----GGCCTGGTTTCT----TTCCCG--C----------------AGTG--------------TTCTGCTGT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460195 68 + 17725628 CAGCAGC-------GGGCGGCAGAGGG-----------------AACG-----C--------------------GCTCT--GGGACA----GGCCTGGCTTCT----TTCCTG--C----------------CATG--------------TTCTGCCGT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424614 84 - 6778120 CAGCAGT-------GGGCAGCAGAGGG-----------------AGAG-----C----CAGCCCGTGGAAAACCGCTCT--GGGACA----GGCCTGGTTTCT----TTCCTG--C----------------GGTG--------------TCCTGCTGT- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69065 85 - 69927 CAGCAGT-------GGGCAGCAGAGGG-----------------AGAG-----C---CCAGCCCTTGGAAACCTGCTCT--GGGACA----GGCCTTGTTTCT----TTCCCA--C----------------AGTG--------------TTCTGCTGT- i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 415333 104 - 608964 TAACACCATTCT-GGGGTCACAGGTGG-----------------AAGGAGACCC---CTAGCCCATGGAAGCCTG----------CA----GGCTTGGTTTCT----TTTCCC--CTAAAGCCTGCTCAATTGGTA--------------TTCTGCCTG- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65431006 112 - 98207768 CCACGCCGCGAC-GAGGCAGCTGATGGGCAATGAGCCGCCTGTTGGAG-----C---CTAACCCTAGGATATCT--TCT--AGGATATCTTGTTTGGTTCTCC----CTCCCCGAC----------------AATG--------------CTTGCCCAA- i mm10.chr16 C 0 I 12 s canFam3.chr33 29068425 73 + 31377067 --GCAGG-------AGGCAG-GGAGGC-----------------CCAG-GATCC---CCAGCCCAGGGG---CCCCCCC--AGGACG------CTCGGGCCC--------CCC--A----------------AGCC--------------CTCTC----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3892788 117 + 6579706 CAATGACATGTTTGGATCATAGGGGAG-----------------ACAG-AGTCC---CCAGCCCCTAGAAACCTGCTTCCAGGAAAA----GCCTTGGCTTCTTACCTTCCCC--C----------------AATGCCTTCCAATCTGCATTCTGCCTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7417780 107 + 22200726 I e micMur3.chr1 25902815 110 - 114275543 I a score=935408.000000 s hg38.chr3_KI270779v1_alt 123837 68 + 205312 GGGCCACTCGG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAGGGCAACCCCTTT- s panTro5.chr3 200112972 68 + 202621043 GGGCCACTCGG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGAGTTTCTCTGCAGGGCAACCCCTTT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88267 68 + 190779 GGGCCACTCGG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGAGTTTCTCTGCAGGGCAACCCCTTT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52760 68 + 106623 GGGCCACTCGG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCATTTCTCTGCAGGGCAACCCCTTT- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870796 65 + 123690457 ---CCACTCGG-AA--CC-CCAAACCAT------CCTTCCCTG--CTTTTCCAGGCGTTTCTCTGCAGGGCAACCCCTTT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461250 68 + 204787373 GGGCCACTCAG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68482 68 + 192460366 GGGCCACTCAG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544234 68 + 19675229 GGGCCACTCAG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483369 68 + 16847902 GGGCCACTCAG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417433 68 - 91754291 GGGCCACTCAG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGTGTTTCTCTGCAGGGCAACCCCTTT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 575999 68 - 1977891 GGGCCACTCAG-AA--CC-CCAAACCAT------CCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453297 69 + 7796314 GGGCCACTCAGAAA--CC-CCAAACCAT------CCTTCCCCA--CTTTTCCAGGCGTTTCTCTGCAGGGCAACCCCTTT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936563 50 - 74750902 GGGCCA--------------------CT------CCTTCTCCC--CTTTTCCAGGCATT--TCTGCAGGGAAACCCCCTT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460263 68 + 17725628 GGGCCACTCGG-AA--CC-CCAAACCCT------CCTCCTCCC--CTTTTCCAGGCATTTCTCTGCAGGGAAACACTCTT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424698 68 - 6778120 GGGCCACTCGG-AA--CC-CCAGACCCT------CCTTCTCCC--CTTTTCCAGGCATTTCTCTGCAGGGAAACACTCTT- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69150 68 - 69927 GGGCCACTTGG-AA--CC-CCAGACCCT------CCTTCTCCC--CTTTTCCAGGCATTTCTCTGCAGGGAAACCCTCTT- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25902925 69 - 114275543 GGGCCACTCAG-AA--CCTCCAAACCAT------CCTTCTCCC--CCTTTCCAGGCTTTTCTCTGCAGGACAACCCTTTT- i micMur3.chr1 I 110 I 121 s proCoq1.NW_012133858v1 7417887 69 + 22200726 GGGCCACTCAG-AA--CCTCCAAACCAT------CCTTCTCCC--CCTTTCCAGGCTTTTCTCTGCAGGGCAACCCTTTT- i proCoq1.NW_012133858v1 I 107 I 118 s otoGar3.GL873829 415438 69 - 608964 GGGCCACTCAG-AA--CCCCCAAACCAT------CCTTTCCCC--CACTTCCAGGCATTTCTATGCAGGCAACCCCGTTT- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65431130 70 - 98207768 TCACTACTCTG-AA--CC-CCACACTGC------CTTCCCCACATCTTCCCCAAGCATGTCTCTGTAAAGCAACCGTTCT- i mm10.chr16 I 12 C 0 s canFam3.chr33 29068498 70 + 31377067 GGCCTGCCTAG-CAGTCC-CCGACCCCTGAAGTCTCCCCCTCC--CTTCTCCTGG---TCCCCTGCCCG--AAGCCTTT-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3892905 61 + 6579706 GAGCTACTCTG-AA--CC-CCAAACTAT------C----------CTTCTCCAGGCCTTTCCCTGCCTGGTAACCTTTTTT i dasNov3.JH569502 C 0 C 0 a score=1456647.000000 s hg38.chr3_KI270779v1_alt 123905 128 + 205312 CCCCGGCCAGACAGGTATTCTTCCACTTTTGTGGAGGGACTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCTGGCTTTCCTCACGCCCTCCC s panTro5.chr3 200113040 128 + 202621043 CCCCGGCCAGACAGGTATTCTTCCACTTCTGTGGAGGGACTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCTGGCTTTCCTCATGCCCTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88335 128 + 190779 CCCCGGCCAGACAGGTATTCTTCCACTTCTGTGGAGGGACTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCTGGCTTTCCTCACGCCCTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52828 128 + 106623 CCCCGGCCAGACAGGTATTCTTCCACTTCTGTGGAAGGACTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCTGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCTGGCTTTCCTCACGCCCTCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870861 128 + 123690457 CCCTGGCCAGGCAGGTATTCTTCCACTTCTGTGGAGGGACTGGAGTGTGTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCTGGCTTTCCTCACGCCCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461318 128 + 204787373 CCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTC-A-GAAAGGACCCTGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTCGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68550 128 + 192460366 CCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTC-A-GAAAGGACCCTGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTCGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544302 128 + 19675229 CCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTC-A-AAAAGGACCCTGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTCGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483437 128 + 16847902 CCTCGACCAGGCAGGTATTCTTCCACTTTTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTC-A-GAAAGGACCCTGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417501 128 - 91754291 CCTCGGCCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGCTTCTCACACCTTCTGCTTC-A-GAAAGGACCCTGAATGCT---GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTCGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576067 128 - 1977891 CCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTC-A-GAAAGGACCCTGAAGGCT---GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453366 124 + 7796314 CCTCGGCCAGGCAGGTATTCTTCGACTTCTAGAGAGGGACTGGAGTGTTTTTCAGACCTTCTGCTTC-A-GAAAGGACCCTGAA-------GGCAGAGGAGGGGCCC-CCAGCCGGCTTTCCTCACGCCCTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936613 127 - 74750902 CCTCAGCCAGGCAGGCATTCGTCCACTTCTGCAGCAGGAGTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCGGAAGGCT---GGCAGATGAGGGT-CC-CCAGCCAGCTTTCCTCATACTCTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460331 126 + 17725628 CCTCGGCCAGGCAGGTGTTCTTCCACTTCTGCAGCGGGAGTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCAAAGGCT---GGCAGAGGAGGGG--C-CCAGTCGGCTGTCCTCACACTCTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424766 126 - 6778120 CCTCCGCCAGGCAGGTATTCTTCCACTTATGCAGTGGGAGTGGAGTGTTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCGAAGGCC---GGCAGAGGAGGGC--C-CGGGCCGGCTCTCCCCACATTCTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69218 130 - 69927 CCTCGGCCAGGCAGGTATTCTTCCACTTCTGCAGCAGGAGTGGAGTGCTTCTCAGACCCTCTGCTTC-A-GAAAGGACCCCAAAGGCTGGCGGCAGAAGACGGA-CC-CCAGCCGGCTTTCCTCACACTCTCCC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 415507 121 - 608964 CCTCTGCCAGGTAAGTATTCTTCCACTTCCACAGAGGGAACGGAGAATTTATCAGACCCTCTGCATCAA-GAAAGGACCCTGAAGGCC---TGCAGGAGAAGGGCCCGGCAGCTTGCTTTCCTCT--------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431200 123 - 98207768 -GTCTGCCAGGTGAGTGGTTTTTCCCCTCTGCACAGGGCATGGCTTGCTGACCAGAGCATCCTCGCC-A-GAGAGGGACCCAGAAGCT---GGTGGGAGAAAGA-TG-TCAGTCTGCT-TCCTCCCCTTCTC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29068568 88 + 31377067 -------------------------CCTCTGCA--------------TTTAGCAGACCTGCTGCAGC-G-GGAAGGGACCCCAAGGCC----GCGGAGTGGGGAGCC-CCAGCCTGCTTGTCTCGCCCCCTCCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3892966 129 + 6579706 CCTCAGCCAGTTAGGTATTCTCCCACTTCTGCAGAGGGAGTAGAGTGTTAATCAGACCCTGGGCATC-AGGGAAGGACCCATGAGACT---GTAGGAGAAAGGCCCC-CTAGcctcctttccttgctccctccc i dasNov3.JH569502 C 0 I 9 e proCoq1.NW_012133858v1 7417956 118 + 22200726 I e micMur3.chr1 25902994 121 - 114275543 I a score=43707.000000 s hg38.chr3_KI270779v1_alt 124033 3 + 205312 CTC s panTro5.chr3 200113168 3 + 202621043 CTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88463 3 + 190779 CTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52956 3 + 106623 CTC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870989 3 + 123690457 CTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461446 3 + 204787373 CTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68678 3 + 192460366 CTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544430 3 + 19675229 CTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483565 3 + 16847902 CTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417629 3 - 91754291 CTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576195 3 - 1977891 CTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453490 3 + 7796314 CTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936740 3 - 74750902 CTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460457 2 + 17725628 C-C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424892 3 - 6778120 CTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69348 3 - 69927 CTC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903115 3 - 114275543 CTC i micMur3.chr1 I 121 C 0 s otoGar3.GL873829 415628 3 - 608964 CTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431323 3 - 98207768 CCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29068656 2 + 31377067 -TC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3893104 3 + 6579706 ccc i dasNov3.JH569502 I 9 C 0 e proCoq1.NW_012133858v1 7417956 118 + 22200726 I a score=127562.000000 s hg38.chr3_KI270779v1_alt 124036 8 + 205312 TCACGTCC s panTro5.chr3 200113171 8 + 202621043 TCACGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88466 8 + 190779 TCACATCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52959 8 + 106623 TCACGTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120870992 8 + 123690457 TCACGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461449 8 + 204787373 TCACTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68681 8 + 192460366 TCACTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544433 8 + 19675229 TCACTTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483568 8 + 16847902 TCACTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417632 8 - 91754291 TCACTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576198 8 - 1977891 TCACTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453493 8 + 7796314 TCACTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936743 8 - 74750902 TCACTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460459 8 + 17725628 TCACTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424895 8 - 6778120 TCACTTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69351 7 - 69927 T-ACTTCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903118 8 - 114275543 TCACTTCC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7418074 8 + 22200726 TCACTTCC i proCoq1.NW_012133858v1 I 118 C 0 s otoGar3.GL873829 415631 8 - 608964 TCACTTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431326 8 - 98207768 TCACATCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29068659 8 + 31377067 TCCCGCCC i canFam3.chr33 I 1 I 151 s dasNov3.JH569502 3893107 8 + 6579706 tcatttcc i dasNov3.JH569502 C 0 C 0 a score=1186053.000000 s hg38.chr3_KI270779v1_alt 124044 88 + 205312 ATCTCCTTTTCTGCCTTTATAAAAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTGTAGATTTTATTTGGG s panTro5.chr3 200113179 88 + 202621043 ATCTCCTTTTCTGCCTTTATAAAAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTGTAGATTTTATTTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88474 88 + 190779 ATCTCCTTTTCTGCCTTTATAAAAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTGTAGATTTTATTTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 52967 88 + 106623 ATCTCCTTTTCTGCCTTTATAAAAGCTGCAGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTGTAGATTTTATTTGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871000 86 + 123690457 ATCTCCTTTTCTGCCTTTATAACAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAA--CGCAGTGATCTGTAGATTTTATTTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461457 88 + 204787373 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGACCTCTAGATTTTATTTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68689 88 + 192460366 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGACCTCTAGATTTTATTTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544441 88 + 19675229 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGACCTCTAGATTTTATTTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483576 88 + 16847902 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTCTAGATTTTATTTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417640 88 - 91754291 GTCTCCTCTTCTGCATTTATAGAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTCTAGATTTTATTTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576206 88 - 1977891 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTCTAGATTTTATTTGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453501 88 + 7796314 ACCTCCTTGTCTGCGTTTATAAAATCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTCTAGATTTTATTTGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936751 88 - 74750902 ATCTCCTTTTCTGCCTTTATAGAAGCTGCAGTTCCACCCACTCTGGCCTTGGCTCTGAAGACACAGTGATCTCTAGATTTTATTTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460467 88 + 17725628 GTCTCCTTTTCTGCCTTTATCAAAGCTGCAGCCCCACCCACTCTGGCCTTGGATCTGAAGACACAGTGATCTCTAGATTTTATGTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424903 88 - 6778120 ATCTCCTTTTCTGCCTTTATCAAAGCTGCACTCCCACCCACTCTGGCCTTGGCTCTGAAGGCACAGTGATCTCTAGATTGTATTTGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69358 88 - 69927 ATCTCCTTTTCTGCCTTAATAAAAGCTGCAGTTCCACCCCCTCTGGCCTTGGCTCTGAAGACACAGTGATCTCTAGACTTTATTTGGG i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903126 86 - 114275543 ATCTCC-TTTCTGCCTTTAGA-ATGCTGTGGTTCTATCCACTCTGGCTTCTGCTCTGAAGACACAGTAATCTCTAGATGTTATTTGGG i micMur3.chr1 C 0 I 54 s proCoq1.NW_012133858v1 7418082 87 + 22200726 ATCTCCTTTTCCGCCTTTAGA-AGGCTGTGGTTCTACCCACTGTGGCTTCTTCTCTGAAGACTCAGTAATCTCTAGATGTTATTTGGG i proCoq1.NW_012133858v1 C 0 I 66 s otoGar3.GL873829 415639 82 - 608964 ATTTCCTCTGCTGCCTTCATC-AGGCTGTGGTTCTACCCACTCTGGCCTCTCTTCTAAAGA--CAGTGATTTCTAGATGTTATTT--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431334 48 - 98207768 GTCTCCT----------------------GGTCCCACCCA----------------GAAGGCGC--CAGTCTCCTGGTTGTGTTTGGC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893115 87 + 6579706 atctccttttctgcctccATA-AGACTGTGATTTTGCCCACTCTGGCCTCTGCTCAGAAGACCAAGTAGTCTCTGGGTTTTATTTGGG i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29068667 151 + 31377067 I a score=819350.000000 s hg38.chr3_KI270779v1_alt 124132 74 + 205312 TGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA---GACTCTGGTGACTCAGAGCGGGAGGAAC s panTro5.chr3 200113267 74 + 202621043 TGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA---GACTCTGGTGGCTCAGAGCGGGAGGAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88562 74 + 190779 TGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA---GACTCTGGTGGCTCAGAGCGGGAGGAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53055 74 + 106623 TGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA---GACTCTGGTGGCTCAGAGCGGGAGGAAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871086 74 + 123690457 TGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA---GACTCTGGTGGCTCAGAGCGGGAGGAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461545 74 + 204787373 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA---GACTCTGATGGCTCAGAGCGGGAGGAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68777 74 + 192460366 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA---GACTCTGATGGCTCAGAGCGGGAGGAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544529 74 + 19675229 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA---GACTCTGATGGCTCAGAGCGGGAGGAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483664 74 + 16847902 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTCTGATCTCCCTCATCA---GACTCTGATGGCTCAGAGCGGGAGGAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417728 74 - 91754291 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA---GACTCTGGTGGCTCGGAGCGGGAGGAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576294 74 - 1977891 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA---GACTCTGATGGCTCAGAGCGGGAGGAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453589 74 + 7796314 TGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA---GACTCTGATGGCTCAGAGCGGGAGGAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936839 57 - 74750902 TGCCTTAGGGGGCTTGGTAAAGGCCTCCCTGTGACCTCCCTCATC--------------------AGCGGGAGGGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460555 73 + 17725628 TGCCTTAGGGGGCTGGGTAAAGGCCTCACT-TGATCTCCCTCATCA---GACTATGGTGGCTCAGAGCGGGAGGGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 424991 73 - 6778120 TGCCTTA-GGGGCTGGGTAAAGGCCTCACTGTGATCTCCCTCGTCA---GACTCTGGTGGCTCAGAGCGGGAGGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69446 74 - 69927 TGCCTTAGGGGGCTTGGTAAGGGCCTCCCTGTGATCTCCCTCATCA---GACTCTGGTGGCTCAGAGCGGGAGGGAC i aotNan1.NW_018503669v1 C 0 C 0 s otoGar3.GL873829 415721 50 - 608964 -------GGGGACTTGATGGAAGCTTCACTGTGA-----------------CTCCAGTGGCTCAGAGGGAGAGG--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431382 73 - 98207768 AGCCTTAGAGGATTGG--AAAGGTTGCACTGTCACCTCTGTCATGGT--GACAACACTGGCTCAGAGGAAGAGGAGC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893202 73 + 6579706 TGCCT---GGGGCTTGGTGGA-GCCTCTCTGTCACCTCCCTCATCAGCAGGCCTCCGTGGCTCGGAAGTGGGGGAAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418169 66 + 22200726 I e micMur3.chr1 25903212 54 - 114275543 I e canFam3.chr33 29068667 151 + 31377067 I a score=141500.000000 s hg38.chr3_KI270779v1_alt 124206 10 + 205312 AGATGGCTGG--- s panTro5.chr3 200113341 10 + 202621043 AGATGGCTGG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88636 10 + 190779 AGATGGCTGG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53129 10 + 106623 AGATGGCTGG--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871160 10 + 123690457 AGATGGCTGG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461619 10 + 204787373 AGGTGGCTGG--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68851 10 + 192460366 AGGTGGCTGG--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544603 10 + 19675229 AGGTGGCTGG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483738 10 + 16847902 AGATGGCTGG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417802 10 - 91754291 AGGTGGCTGG--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576368 10 - 1977891 AGATGGCTGG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453663 10 + 7796314 AGATGGCTGG--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936896 10 - 74750902 AGATGGCTGG--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460628 10 + 17725628 AGATGGCGGG--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425064 10 - 6778120 AGATGGCTGG--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69520 10 - 69927 AGATGGCTGG--- i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903266 10 - 114275543 AGATGGCTGG--- i micMur3.chr1 I 54 I 2 s otoGar3.GL873829 415771 10 - 608964 AGATGGCAGG--- i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65431455 10 - 98207768 AGACGCATAG--- i mm10.chr16 C 0 I 2 s dasNov3.JH569502 3893275 13 + 6579706 AGAGGGCTGGGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418169 66 + 22200726 I e canFam3.chr33 29068667 151 + 31377067 I a score=1510653.000000 s hg38.chr3_KI270779v1_alt 124216 114 + 205312 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTCGTGAGATGCAGAGATCCTGAGCCTCGTGTCTCTGAAGATCCC s panTro5.chr3 200113351 114 + 202621043 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTCGTGAGATGCAGAGATCCTGAGCCTCGTGTCTCTGAAGATCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88646 114 + 190779 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTCGTGAGATGCAGAGATCCTGAGCCTCGTGTCTCTGAAGATCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53139 114 + 106623 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTCATGAGATGCAGAGATCCTGAGCCTCGTGTCTCTGAAGATCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871170 45 + 123690457 GAAGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCA--------------------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461629 114 + 204787373 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGACGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68861 114 + 192460366 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544613 114 + 19675229 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483748 114 + 16847902 GAGGACACAAAGGGAAAATCAGGCACCTTTGCTGCCAGATCCCCACACCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGACCCTGGGCCTCGTGTCTCTGAAGACCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417812 114 - 91754291 GAGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576378 114 - 1977891 GAGGACTCAAACGGAAAATCAGGCACCTTTGCTGCCAGATCCCCACACCAGCCCCTCCAAACGTCCTGACTCGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453673 113 + 7796314 GAGGACTCAAAGGGAAAATCAGGCAGCTTTGCTGCCAGATCCCCACGCCAGCCCCTCCAAACATCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGA-CCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 936906 113 - 74750902 GAGGACTCAAAGGGAAAATGAGGCACCTTTACTGCTGGATCCCTGTGCCAGCACCCACAAATGTCCTGATTTGTGAGATGCAGAGA-CCTGGGCCCCGTGTCTCTGAAGACGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460638 112 + 17725628 GAGGACTCAAAGGGAAAATCAGGCACC-TTACTGCTGGGTCCCCATGCCAGCACCCCCAAATGTCCTGATTTGTGAGATGCAGAGA-CCTGGGCCTCCCGTCTCTGAAGACGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425074 113 - 6778120 GAGGACTCAAAGGGAAAATCAGGTACCTTTACTGCTGGATCCCCGTGCCAGTACCCCCAAATGTCCTGATTTGTGAGATGCAGAGA-CCTGGGCCTCGTGTCTCTGAAGACGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69530 113 - 69927 GAGGACTCAAAGGGAAAATCAGGCACCTTTACTGCTGGATCCCCGTGCCAGCACCCCCAAATGTCCTGATTTGTGAGATGCAGAGA-CCCAGGCCTCGTGTCTCTGAAGACGCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903278 114 - 114275543 GAGGGCTCAAAGGGAAAATGAGGCACCTTTGCCTGCAGATCCCCATGGTGGTTCCTCCAAATGTCCTGACTTGTGAGATGCAGAGACCCTGGGCCTCCTGTGTCTGAAGACCCC i micMur3.chr1 I 2 I 132 s proCoq1.NW_012133858v1 7418235 113 + 22200726 GAGGGCTCAAAGGGAAAATGAGGCACCTTTGCCTCCAGATCCCCATGGCTGTTCCTCCAAATGTCCTGACTTGTGAGATGCAGAGACCCTGGGCCTCCTGTCCCTGAAGACCC- i proCoq1.NW_012133858v1 I 66 C 0 s otoGar3.GL873829 415783 114 - 608964 GAGAGCATAAAAGGAAAATGAGGCACCTTTGCTGCCAGATCCCCATGGAATTTCCTCTAAATGTCCTGACTTGTGAGAAGCAGAGACCCTGGGCCTCATGTCTCTGGAGACACC i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65431467 106 - 98207768 AAGAACCCAAAGGAAAACTGAGGTTCC--------GAGGTCCCCATAGCAACACCTCCAGATTCTCCAACTTGTCAAAGGCAGAGCCCCTGAGCACCGTGTTTCTGAAGATGCC i mm10.chr16 I 2 C 0 s dasNov3.JH569502 3893288 101 + 6579706 GAGGACTCA----GGAAACGAGGAGCTTCTGCCACCGG-CCCCCATGGCAGCACCTCCAGACGTCCCGAGTTGTGAGGTATAAAGACTGTGAG--------AGAGGAAGACCCC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29068667 151 + 31377067 I a score=1545892.000000 s hg38.chr3_KI270779v1_alt 124330 145 + 205312 CAGGGATCCCGAGGACC-CAGCTTGC--CC--GGTTCTCTGGCGGCTGCT-GA------AGTCTCCTCC-----------------CCAAACCATCTTCAGTCTTTCGCCCGGGGCTCCCCCCATCAATGCCTCAGGGATGCCC-AGCCCCGTCCCCTCCCCTATGCCTGTACAA s panTro5.chr3 200113465 145 + 202621043 CAGGGATCCCGAGGACC-CAGCTTGC--CC--GGTTCCCTGGCGGCTGCT-GA------AGTCTCCTCC-----------------CCAAACCATCTTCAGTCTTTCGCCCCGGGCTTCCCCCATCAATGCCTCAGGGATGCCC-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88760 145 + 190779 CAGGGATCCCGAGGACC-CAGCTTGC--CC--GGTTCCCTGGCGGCTGCT-GA------AGTCTCCTCC-----------------CCAAACCATCTTCAGTCTTTCGCCCGGGGCTCCCCCCATCAATGCCTCAGGGATGCCC-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53253 145 + 106623 CAGGGATCCCGAGGACC-CAGCTTGC--CC--GGTTCCCTGGCGGCTGCT-GA------AGTCTCCTCC-----------------CCAAACCATCTTCAGTCTTTCGTCCGGGGCTCCCCCCATCAATGCCTCAGGGATGCCC-AGCCCCGTCGCCTCCCCTATGCCTGTACAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871215 141 + 123690457 --------CCGAGGACC-CAGCTTGC--CC--GGTTCCCTGG-AGCTGCT-GA------AGTCTCCTCC------------CCTGGCCAAACCATCTTCAGTCTTTTGCCCGGGGTTCCCCCCATCAATGCCTCAGGGATGCTC-AGCCCCGTCCCCTCCGCTATGCCTGTACAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461743 150 + 204787373 CAGGGAGCCCGAGGAGC-CAGCTTGC--CC--GGTTCCCTGGCCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 68975 150 + 192460366 CAGGGAGCCCGAGGAGC-CAGCTTGC--CC--GGTTCCCTGGCCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544727 150 + 19675229 CAGGGAGCCCGAGGAGC-CAGCTTGC--CC--GGTTCCCTGGCCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 483862 150 + 16847902 CAGGGAGCCCGAGGAGC-CAGCTTGC--CC--GGTTCCCTGGCCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-AGCCCCGTCCCCTCCCCTATACCTGTACAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 417926 150 - 91754291 CAAGGTGCCCGAGGAGG-CAGCTTGC--CC--AGTTCCCTGACCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTGTCCCCCATCAATGCCTCAGGGATGCTC-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576492 150 - 1977891 CAGGGAGCCCGAGGAGC-CAGCTTGC--CC--GGTTCCCTGGCCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATTTTT-AGCCCCGTCCCCTCCCCTATGCCTGTACAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453786 150 + 7796314 CAGGGAGCCCGAGGACC-CAGCCTGC--CC--GGTTCCCTGGCCGCTGCT-GA------AGTCTCCTCC------------CCTGGGCAGACCACCTTCAGTCTTTTGCCCAGGGTTTCCCCCGTCAATGCCTCAGGGATGCTC-AGCCCTGTCCCCTCCCCTGTGCCTGTACAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937019 147 - 74750902 TAGAGAGCCCGAGGACC-CAGCTTTC--CC--GGTTCGCGGGCC---ACT-GA------AGTCTCCTCT------------TTTCACCAGATCATCTTCGGTCTTTTGCCTGGGGTTTTCCCCATTAATGTCTCAGGGATGCTG-AGTGCTATCCCCTCCCCTGTGCCTGTACAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460750 135 + 17725628 TAGGGAGCCCAAGGACC-CAGCTTTC--CC--GGTTCGCTGGCC---GCT-GA------AGTCCCCTCT------------CTTCACCAGACCATCTTCAGTC------------TTTTCCCCATCAATGTCTCAGGGATGCTG-AGTGCTGTCCCCGCCCCTGTGCCTGTACAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425187 145 - 6778120 CAGGGAGCCTGAGGACC-CAGCTTTC--CT--GGTTCGCTGGCC---GCT-GA------AGTCTCCTCT------------CTTCACCGCCCCATCTTCACTT--TGGCCTGGGGTTTTCCCCATCAATGTCTCGGGGGCGCTG-AGCACTGTCCCCTCCCCTGTGCCTGTACCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69643 146 - 69927 CAGGGAGCCCGAGGACC-CCGCTTTC--CC--GGTTCGCTGGCC----CT-GA------AGTCTCGTCT------------CTTCACCAGACCATCTTCAGTCTTGTGCCTGGGGTTTTCCCCATCAATGCCTCAGGGATGCTG-AGCGCTGTCCCCTCCCCTGTGCCTGTACAA i aotNan1.NW_018503669v1 C 0 C 0 s proCoq1.NW_012133858v1 7418348 147 + 22200726 TGAGGAGCCCGACGGCCCCAGCTTGC--CCCGGGTTCCCTGGCTGCTGCTGGA------AGCC-CCTCC------------CCTCTCCAGACCATCTTCAGTCTTTTTCCCTGTGTTTTCCCCATCAGTGCCTCAGGGGTGCTC-TGCCCTGTCCCCTCCCCTGTGCCT------ i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 415897 144 - 608964 TGAGGAGCCTGAGAGCCTCAGCTTGC--CTAGGGTTCCTGGGATGCTGCTAGA------AGCCTCTTCC------------CTTCTTCAGACCACCTTTGGGC-TTTTACCTGGGTTGTCCCCATCAGTGCTTCAGGGCTGCTC-TGCCCTGTCCCTTCCCCTGTG--------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431573 120 - 98207768 -CAGGTACCTGAGAGCC-TAGCTAGC--CT------------------CT-GATCAATTAGCCTTATCC---------------------------ATCAGTCTTT--CCCTATGTTTTCTCCAGCAGGGTCTTGAGGCTGCTCTGGTCCAGGCTCATCCTCGGCTTCTGCA--- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893389 164 + 6579706 TGAGCAGCCTGCGAGCCCCAGCTTGCTTCT--GGTTCCGAGGCCACCGCTGGA------AGTCTCCTCTTCCCTTCTCCTCCCAGTCCACCCCTTCTCAGGTCTTTTGTCCTGAGTTTGCTTC--CAGCTGCTTCCAGCTGCTC-TTCCCCGGACCCTCCTCTATGCCTGTACAA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25903392 132 - 114275543 I e canFam3.chr33 29068667 151 + 31377067 I a score=630375.000000 s hg38.chr3_KI270779v1_alt 124475 43 + 205312 CCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCA s panTro5.chr3 200113610 43 + 202621043 CCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88905 43 + 190779 CCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53398 43 + 106623 CCTCTTCTCCGCCAGCCCCACACCATCCACCACCGCCTTTCCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871356 43 + 123690457 CCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461893 40 + 204787373 CCTCTTCTCCTTCAGCACCACACCAT---CCACCCCCTTTCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69125 43 + 192460366 CCTCTTCTCCTTCAGCACCACACCATCTGCCACCCCCTTTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544877 43 + 19675229 CCTCTTCTCTTTCAGCACCACACCATCTGCCACCCCCTTTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484012 40 + 16847902 CCTCTTCTCCTTCAGCACCACACCAT---CCACCCCCTTTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418076 43 - 91754291 CCTCTTCTCCTTCAGCACCACACCCTCTGCCACCCCCTTTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576642 40 - 1977891 CCTCTTCTCCTTCAGCACCACACCAT---CCACCCCCTTTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453936 43 + 7796314 CCTCTTCTCCTTCAGCACCACACCATCCACCACCCCCTTTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937166 43 - 74750902 CCTCTTTTCCTTCAGCCCCACACCACCTACCACCCCCTTTTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460885 43 + 17725628 CCTCTTCTCCTTCAGCCCCACACCATCTGCCACCCCCTTTCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425332 43 - 6778120 CCTCTTCTCCTTCAGCCCCACACCATCTACCACCCGCTTTCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69789 43 - 69927 CCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCGTTTCCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903524 43 - 114275543 CCTCTTATCCTTCAGCCCCACACCATCCACCACCCCCTTTCCA i micMur3.chr1 I 132 C 0 s proCoq1.NW_012133858v1 7418495 40 + 22200726 ---CTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCA i proCoq1.NW_012133858v1 C 0 I 26 s otoGar3.GL873829 416041 31 - 608964 CCTCTTCTCCTTCAGCCCCACA-TGTCCACCA----------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431693 41 - 98207768 --TCCTCTCCTGCATCCCCACACTACCTCCCACCCCTTTCTAA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893553 42 + 6579706 CCTCTTCTCC-ACAGCCCCACATCATCTGCCACCCTATTTCCA i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29068667 151 + 31377067 I a score=14017.000000 s hg38.chr3_KI270779v1_alt 124518 4 + 205312 GGCC s panTro5.chr3 200113653 2 + 202621043 GG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88948 2 + 190779 GG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53441 2 + 106623 GG-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871399 2 + 123690457 GG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461933 4 + 204787373 GGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69168 4 + 192460366 GGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544920 4 + 19675229 GGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484052 4 + 16847902 GGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418119 4 - 91754291 GACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576682 4 - 1977891 GGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453979 4 + 7796314 GGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937209 4 - 74750902 AGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460928 4 + 17725628 AGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425375 4 - 6778120 AGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69832 4 - 69927 AGCC i aotNan1.NW_018503669v1 C 0 C 0 s micMur3.chr1 25903567 4 - 114275543 AGCC i micMur3.chr1 C 0 I 41 s otoGar3.GL873829 416072 4 - 608964 AGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431734 4 - 98207768 GTCC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893595 4 + 6579706 AGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418535 26 + 22200726 I e canFam3.chr33 29068667 151 + 31377067 I a score=28120.000000 s hg38.chr3_KI270779v1_alt 124522 27 + 205312 TGCCTAGATTTCCCATACCTGCCTAGA s rheMac8.chr2 202461937 15 + 204787373 TACCTAGATTTCCCG------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69172 15 + 192460366 TACCTAGATTTCCCG------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544924 27 + 19675229 TACCTAGATTTCCCGTACCTGCCTAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484056 15 + 16847902 TACCTAGATTTCCCG------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418123 15 - 91754291 TGCCTAGATTTCCCA------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576686 15 - 1977891 TACCTAGATTTCCCG------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453983 10 + 7796314 TACCTAGATT----------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937213 15 - 74750902 TACCTACATTTCCCA------------ i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 460932 15 + 17725628 TGCCTACATTTCCCA------------ i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 425379 1 - 6778120 T-------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018503669v1 69836 15 - 69927 TACCTACATTTCCCA------------ i aotNan1.NW_018503669v1 C 0 N 0 s otoGar3.GL873829 416076 7 - 608964 --------TTCCTTG------------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431738 7 - 98207768 --------TCCCCCA------------ i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3893599 6 + 6579706 ---------CTCCTA------------ i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418535 26 + 22200726 I e micMur3.chr1 25903571 41 - 114275543 I e canFam3.chr33 29068667 151 + 31377067 I e panPan2.chrUn_NW_014024201v1 88950 0 + 190779 C e nomLeu3.chr11 120871401 0 + 123690457 C e gorGor5.CYUI01000576v1 53443 0 + 106623 C e panTro5.chr3 200113655 0 + 202621043 C a score=36995.000000 s hg38.chr3_KI270779v1_alt 124549 42 + 205312 T-----------------------------------GATTTCCCACACCTGCCTAGATTTCCCACACCTG-------------CCTAGAT s panTro5.chr3 200113655 30 + 202621043 -----------------------------------------------CCTGCCTAGATTTCCCACACCTG-------------CCTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88950 30 + 190779 -----------------------------------------------CCTGCCTAGATTTCCCACACCTG-------------CCTAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53443 30 + 106623 -----------------------------------------------CCTGCCTAGATTTCCCATACCTG-------------CCTAGAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871401 30 + 123690457 -----------------------------------------------CCTGCCTAGATTTCCCATACCTG-------------CCTAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202461952 64 + 204787373 --------------------------TACCTGCCTAGATTTCCCGTACCTGCCTAGATTTCCCGTACCTGCCTAGATTACCTACCTAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69187 64 + 192460366 --------------------------TACCTGCCTAGATTTCCCGTACCTGCCTAGATTTCCCATACCTGCCTAGATTACCTACCTAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 544951 90 + 19675229 TTTCCCATACCTGCCTAGATTTCCCATACCTGCCTAGATTTCCCGTACCTGCCTAGATTTCCCGTACCTGCCTAGATTACCTACCTAGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484071 45 + 16847902 ---------------------------------------------TACCTGCCTAGATTTCCCGTACCTGCCTAGATTACCTACCTAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418138 45 - 91754291 ---------------------------------------------TACCTGCCTACATTTCCCATACCTGCCTAGATTACCTACCTAGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576701 45 - 1977891 ---------------------------------------------TACCTGCCTAGATTTCCCATACCTGCCTAGATTACCTACCTAGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 453993 35 + 7796314 -------------------------------------------------------GATTTCCCATACCTGCCTAGATTACCTACCTAGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937229 12 - 74750902 ------------------------------------------------------------------------------ACTGACCTAGAC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 460948 12 + 17725628 ------------------------------------------------------------------------------ACCTACCTAGCC i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 425380 8 - 6778120 ----------------------------------------------------------------------------------ACCTAGAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 416083 16 - 608964 -------------------------------------------------------------CCATACCCA-------------TCTATAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431746 15 - 98207768 ---------------------------------------------------TACAGCTTCTTATCA------------------------ i mm10.chr16 I 1 C 0 s dasNov3.JH569502 3893605 17 + 6579706 ------------------------------------------------------------CCCCCACCCA-------------CCTATAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418535 26 + 22200726 I e micMur3.chr1 25903571 41 - 114275543 I e canFam3.chr33 29068667 151 + 31377067 I a score=180212.000000 s hg38.chr3_KI270779v1_alt 124591 19 + 205312 TGAGCATTCTAAAGATCTG s panTro5.chr3 200113685 19 + 202621043 TGAGCATTCTAAAGATCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88980 19 + 190779 TGAGCATTCTAAAGATCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53473 19 + 106623 TGAGCATTCTAAAGATCTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871431 19 + 123690457 TGAGCATTCTAAAGATTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462016 19 + 204787373 TGCGCATTCTAAAGGCTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69251 19 + 192460366 TGTGCATTCTAAAGGCTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545041 19 + 19675229 TGTGCATTCTAAAGGCTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484116 19 + 16847902 TGCACATTCTAAAGGCTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418183 19 - 91754291 TGAGCATTCTAAAGGCTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576746 19 - 1977891 TGCGCATTCTAAAGGCTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454028 19 + 7796314 TGAGCATTCTAAAGGCTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937241 18 - 74750902 TGAGCATTCTAA-GGCTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460960 17 + 17725628 TGAGCATTCTGA--GCGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425388 18 - 6778120 TGGGCGTTCTAA-GGCTTG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7418561 19 + 22200726 TGAGCGTTGTAAAGATTTT i proCoq1.NW_012133858v1 I 26 C 0 s otoGar3.GL873829 416099 19 - 608964 TGAGCATTCTAAAGACTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431761 16 - 98207768 TGAG---GTAAAAGACACA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893622 19 + 6579706 TGAGCATTCTAAAGACTTG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25903571 41 - 114275543 I e canFam3.chr33 29068667 151 + 31377067 I a score=16511.000000 s hg38.chr3_KI270779v1_alt 124610 1 + 205312 C s panTro5.chr3 200113704 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 88999 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53492 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871450 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462035 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69270 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545060 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484135 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418202 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576765 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454047 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937259 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460977 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425406 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903612 1 - 114275543 C i micMur3.chr1 I 41 C 0 s proCoq1.NW_012133858v1 7418580 1 + 22200726 C i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 416118 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431777 1 - 98207768 T i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3893641 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29068667 151 + 31377067 I a score=392851.000000 s hg38.chr3_KI270779v1_alt 124611 33 + 205312 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCT s panTro5.chr3 200113705 33 + 202621043 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89000 33 + 190779 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53493 33 + 106623 TGGAAGAAGGAGAGAAATGGTTTGCCTTTGGCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871451 33 + 123690457 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462036 33 + 204787373 CAGAGAAGGGAGAGAAATGGTTTGCCTTTGGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69271 33 + 192460366 CGGAGAAGGGAGAGAAATAGTTTGCCTTTGGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545061 33 + 19675229 CGGAGAAGGGAGAGAACTAGTTTGCCTTTGGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484136 33 + 16847902 CGGAGAAGGGAGAGAAATAGTTTGCCTTTGGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418203 32 - 91754291 CGGAAAAGGGAGGGAAATGGTTTGCCTTTGG-T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576766 33 - 1977891 CGGAGAAGGGAGAGAAATAGTTTGCCTTTGGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454048 33 + 7796314 CGGAAAAGGGAGAGAAATGGTTTGCCTTTGGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937260 33 - 74750902 TGGAAAAGGGAGAGAAAGAGATTACCTGTGGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 460978 33 + 17725628 TGGAAAAGGGAGAGAAAGGGACAGCCTTTGGCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425407 33 - 6778120 TGGAAATGGGAGAGAAAGGGACTGCCTTTGGCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903613 33 - 114275543 TGGAATAGGGAGAGAAATGGTTTGCCTTTGGCT i micMur3.chr1 C 0 I 60 s proCoq1.NW_012133858v1 7418581 33 + 22200726 TGGAATAGGGAGAGAAAGGGTTTGCCTTTGGCT i proCoq1.NW_012133858v1 C 0 I 58 s otoGar3.GL873829 416119 33 - 608964 TGGAACAGGGAGAGAAATGGTTTGCCTTTCACT i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65431778 18 - 98207768 TGCTAAAGACAGAAACAC--------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29068818 32 + 31377067 TGGAGAAGGGAGACAAA-GGTTGGTCCCAGGCC i canFam3.chr33 I 151 C 0 s dasNov3.JH569502 3893642 31 + 6579706 TGGAAAAGGGAGAGAAAT-GTTTGTGT-TGACT i dasNov3.JH569502 C 0 C 0 a score=372991.000000 s hg38.chr3_KI270779v1_alt 124644 49 + 205312 -GTCTACACCCTTGAGCTATCAGCTGCTCCCAGAAGCGCCTGCT-CCAGGC s panTro5.chr3 200113738 49 + 202621043 -GTCTACACCCTTGAGCTATCAGCTGCTCCCAGAAGCGCCTGCT-CCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89033 49 + 190779 -GTCTACACCCTTGAGCTATCAGCTGCTCCCAGAAGCGCCTGCT-CCAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53526 49 + 106623 -GTCTACACCCTTGAGCTATCAGCTGCTCCCAGAAGCGCTTGCT-CCAGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871484 49 + 123690457 -GTCTACACCCTTGAGCTGTCAGCTGCTCCCAGAAGTGCCTCCT-CCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462069 49 + 204787373 -GTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGTCCCTCCT-CCAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69304 49 + 192460366 -GTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGTCCCTCCT-CCAGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545094 49 + 19675229 -GTCCACACCCTTGAGCTGTGAGCTGCTCCCAGCAGTCCCTCCT-CCAGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484169 49 + 16847902 -GTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGCCCCTCCT-CCAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418235 48 - 91754291 -GTCTACAGCCTTGAGCTGTGAGCTGCTCCCAGAAGCCCCTCCT-CCAGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576799 49 - 1977891 -GTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGCCCCTCCT-CCAGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454081 49 + 7796314 -GTCTACACCCTTGAGCTATGAGCTGCTCCCAGATGCCCCTCCT-CCAGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937293 49 - 74750902 -GTCACCACACTTGAGCTACCACCTGTCCCCAGATGTCCCTCCT-CCAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461011 47 + 17725628 -ATCTCCACAC-TGAGCTACCAGCTGTCGCC-GAAGCCCCTCCT-CCAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425440 48 - 6778120 -GTCTCCACACTTGAGCTACCACCTGTCCCC-GAAGCCCCTCCT-CCAGGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 416153 49 - 608964 -TCTTAGACCTTTGAAGTGTCACCTGTCCTT-GAACCTTCTCCTGCCAGGG i otoGar3.GL873829 I 1 I 1 s mm10.chr16 65431796 41 - 98207768 ---CAGGACCCTTGACCAATCACCT-------GGACCTCCTCTTGCCAGGG i mm10.chr16 C 0 I 1 s canFam3.chr33 29068850 48 + 31377067 ---CCAGGCCCTCCCGGTGTCAACTGTCCCCAGGCCGTGCTCCTGCCAGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3893673 42 + 6579706 GTCCCAGTTCCTCAGGGAGCCACCTGTCTCC--------TCCCT-CTAGGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418614 58 + 22200726 I e micMur3.chr1 25903646 60 - 114275543 I a score=92001.000000 s hg38.chr3_KI270779v1_alt 124693 6 + 205312 CCTGTT s panTro5.chr3 200113787 6 + 202621043 CCTGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89082 6 + 190779 CCTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53575 6 + 106623 CCTGTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871533 6 + 123690457 CCTGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462118 6 + 204787373 CCTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69353 6 + 192460366 CCTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545143 6 + 19675229 CCTGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484218 6 + 16847902 CCTGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418283 6 - 91754291 CCTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576848 6 - 1977891 CCTGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454130 6 + 7796314 CCTGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937342 6 - 74750902 CCTGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461058 6 + 17725628 CCTGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425488 6 - 6778120 CCTGTT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903706 6 - 114275543 CCTGTT i micMur3.chr1 I 60 C 0 s otoGar3.GL873829 416203 6 - 608964 CCTGTT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65431838 6 - 98207768 CCTGTC i mm10.chr16 I 1 C 0 s canFam3.chr33 29068898 6 + 31377067 CAGGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3893715 6 + 6579706 CCCGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418614 58 + 22200726 I a score=2825862.000000 s hg38.chr3_KI270779v1_alt 124699 178 + 205312 CCCG----------------------------GCTCACCCGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAACGCAGTGGACACTCGGGAAGCACGGCTCCTCACAGGCATCCTCGGAGCCCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGA s panTro5.chr3 200113793 178 + 202621043 CCCG----------------------------GCTCACCCGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAACGCAGTGGACACTCGGGAAGCACGGCTCCTCACAGGCATCCTCGGAGCCCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89088 178 + 190779 CCCG----------------------------GCTCACCCGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAACGCAGTGGACACTCGGGAAGCACGGCTCCTCACAGGCATCCTCGGAGCCCTCGCAGTAGCGGCCAAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53581 178 + 106623 CCCG----------------------------GCTCACCCGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAACGCAGTGGACACTCGGGAAGCACGGCTCCTCACAGGCATCCTCGGAGCCCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871539 178 + 123690457 CCCG----------------------------GCTCACCGGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAACGCAGCGGACACTCGGGAGGCACGGCTCCTCACAGGCATCCTCGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462124 178 + 204787373 CCCG----------------------------GCTCACCAGCACAGTGCCGTCCATCCCCAGTCAGGTGTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAATGCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69359 178 + 192460366 CCCG----------------------------GCTCACCAGCACAGTGCCGTCCATCCCCAGTCAGGTATGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAATGCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGTGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545149 178 + 19675229 CCCG----------------------------GCTCACCAGCACAGTGCCGTCCATCCCCAGTCAGGTGTGGAGGGCAGGGCTCGCAGCCCTTCCCAGGAATGCAGCGGACACTCGGGAAGCACGGTTCCTCACAGGCGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484224 178 + 16847902 CCCG----------------------------GCTCACCAGCGCAGTGCCGTCCATCCCCAGTCAGGTGTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAATGCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGCGCTGGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418289 178 - 91754291 CCCG----------------------------GCTCACCAGCGCAGTGCCGCCCATCCCCAGTCAGGTGTGGAGGGCAGGCCCCGCAGCCCTTCCCAGGAATGCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCGCATCACACTTGCAGCCGGCCATCTGGAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 576854 178 - 1977891 CCCG----------------------------GCTCACCAGCGCAGTGCCGTCCATCCCCAGTCAGGTGTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAATGCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGTGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454136 206 + 7796314 CCCGGAAGCCCGTCCTCCAGGCCCTGTTCCCAGCTCACCAGCGCAGTGCCGCCCATCCCCAGTCAGGTGTGGAGGGCAGGCCTCGCAGCCCTTTCCAGGAATGCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCACCTGGAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937348 178 - 74750902 CCCA----------------------------GCTCACCGGCACAGTGCCGCCCATCCCCGGTCAGGTCTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAACGCAGCTGACATTTGGAAAGCATGGCTCCTCACAGGCGTCCGCAGAGCGCTCGCAGTAGTGGCCGAAGGTGCCCCTGTCACACTTGCAGCTAGCCACCTGGAGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461064 178 + 17725628 CCCA----------------------------GCTCACCAGCACAGTGCCGCCCATCCCCAGTCAGGCCTGGAGGGCAGGCCTCGCAGCCCTTCCCGGGAATGCAGCTGACATTCAGAAAGCAGGGCTCCTCACAGGCGTCCGCAGAGCGCTCGCAGTACCGGCCGAAGGTGCCCCTGTCACACTTGCAGCCAGCCACCTGGAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425494 178 - 6778120 CCCA----------------------------GCTCACCGGCACAGTGCCGCCCATCCCCAGTCAGGCCTGGAGGGCAGGCCTCACAGCCCTTCCCAGGAACGCAGCTGACATTTGGAAAGCACGGCTCCTCACAGGCGTCCGCAGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCTGTCACACTTGCAGCCAGCCACCTGGAGAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903712 178 - 114275543 CACA----------------------------GCTCACCTGCACAGTGACGCCCATCCCCAGTGAGGTTTGGAGGGCAGGCCTCGCAGCCCTGCCCAGGAATGCAGCTGACATTCGGGAAGCATTGCTCCTCACAGGGGTCCTTGGAGCGTTCGCAGTAGAGGCCAAAGGTGTCCCCATCACATTTGCAACCAGCCATCTGGAACA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7418672 178 + 22200726 CCCA----------------------------GCTCACCTGCACAGTGACGCCCATCCCCAGTGAGGTTTGGGGGGCAGGCCTCGCAGCCCTGCCCAGGAATGCAGCTGACATTCGGGAAGCACTGCTCCTCACAGGGGTCCTTGGAGCGTTCGCAGTAGTGGCCAAAGGTGTCCCCGTCACACTTGCAACCAGCCACCTGGAACA i proCoq1.NW_012133858v1 I 58 I 12 s otoGar3.GL873829 416209 178 - 608964 GCCA----------------------------GCTCACCTGCACAATGCCGCCCATCCCCAGTGAGGTGTGGGGGGCAGGCCTCGCAGCCCACCCCACTAGTGCATTTGACCTCTGGGAAGCATTGCTCCTCACAGAGGTCCTTGGAGTGTTCGCAGTAGGGGCCAAAAGTATCCTTGTCACACTCGCAGCCAGCCATCTGGAACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65431844 178 - 98207768 CCAC----------------------------ACTCACCTGCACAATGACGTCCATCTCCAGTTGTGTTTGGAGGGCAGGCCTCACAGCCCTTCCCAGGAATGCAGTTCACGTTAGGGAAGCATGGCTCATCACACGGGTCCTTGGAGCGTTCACACAAGCGGCCAAAGGTGTCCCCATCACACTTGCAGCTGGTCACCTGAATGA i mm10.chr16 C 0 I 5 s canFam3.chr33 29068904 176 + 31377067 -CCC----------------------------GCTTACCTGCACAGTGACGCCCGTCGCCCGTCAGGTGCGGGGGGCAGGCCTCGCAGCCCCTCCCGGGGACGCAGGCCACACCCGCGAAGCACGGCGCCTCGCACTGGTCCCTGGAGCGCTCGCAGTAGTGGCCAAAGGTGCTGGAGCCACACCTGCAGCGGGCCACCTGGAAT- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3893721 178 + 6579706 TCCA----------------------------GCTCACATGCACAGTGACGCCCGTCTCCAGTCGTGTTCAGGGGGCAGGCTTCGCAGCCCTTCCCAGGATTGCACTTCACACCCGGGAAGCACTGCTCCTCACAGAGGCTCTTGGAGCGCTCGCAGTAGCGGCCATAGGTGTCTCTGTCACACTGGCAGGCGGCCACCTGGAATG i dasNov3.JH569502 C 0 C 0 a score=234569.000000 s hg38.chr3_KI270779v1_alt 124877 21 + 205312 GGGTTGCCGATCAC-GGGCGGC s panTro5.chr3 200113971 21 + 202621043 GGGTTGCCGATCAC-GGGCGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89266 21 + 190779 GGGTTGCCGATCAC-GGGCGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53759 21 + 106623 GGGTTGCCGATCAC-GGGCGGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871717 21 + 123690457 GGGTTGCTGATCAC-GGGCGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462302 21 + 204787373 AGGTTGCTGATCAC-GGGCGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69537 21 + 192460366 AGGTTGCTGATCAC-GGGCGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545327 21 + 19675229 AGGTTGCTGATCAC-GGGCGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484402 21 + 16847902 AGGTTGCTGATCAT-GGGCGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418467 21 - 91754291 AGGTTGCTGATCAC-AGGCGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577032 21 - 1977891 AGGTTGCTGATCAC-GGGCGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454342 21 + 7796314 GGGTTGCTGATCAC-GGGCGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937526 22 - 74750902 GGGTTGCTGATCACAGGGTAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461242 22 + 17725628 AGGTTGCTGATCACAGGGCGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425672 22 - 6778120 GGGTTGCTGATCACAGGGAGGC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903890 21 - 114275543 -AGTTGATGATCACTGGGCAGC i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 416387 21 - 608964 -AGTTGATGATTACTGGGTAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65432027 14 - 98207768 GGGCTGCTGGTGTC-------- i mm10.chr16 I 5 C 0 s canFam3.chr33 29069080 22 + 31377067 GGGTGGCTGGTTACTGCGCAGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3893899 21 + 6579706 -GGGAGCTGATCACTGGGCGGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7418850 12 + 22200726 I a score=21000.000000 s hg38.chr3_KI270779v1_alt 124898 1 + 205312 C s panTro5.chr3 200113992 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89287 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53780 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871738 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462323 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69558 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545348 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484423 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418488 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577053 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454363 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937548 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461264 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425694 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903911 1 - 114275543 C i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7418862 1 + 22200726 C i proCoq1.NW_012133858v1 I 12 C 0 s otoGar3.GL873829 416408 1 - 608964 C i otoGar3.GL873829 C 0 I 581 s mm10.chr16 65432041 1 - 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr33 29069102 1 + 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3893920 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 a score=2836369.000000 s hg38.chr3_KI270779v1_alt 124899 248 + 205312 AGGAGACCAAACTGGGAAGGGCTTCTGGGTGTTTCTG-A--CTGACCCCTTTGGCCTGAGAACCCGTGGAC----C-----------------------------------CTGAG-TCATGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTT-GACCAGGCCGTGGGGCGGCAAGGCCCTG--CCTAAAGCCACACGGTAGTCCTGCCCAGCTGGCCTCCCTGGGTCA--TTG-TTTA-CCCTGACCCC--CTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC s panTro5.chr3 200113993 248 + 202621043 AGGAGACCAAACTGGGAAGGGCTTCTGGGTGTTTCTG-A--CTGACCCCTTTGGCCTGAGAACCCGTGGAC----C-----------------------------------CTGAG-TCATGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTT-GACCAGGCCGTGGGGCGGCAAGGCCCTG--CCTAAAGCCACACGGTAGTCCTGCCCAGTTGGCCTCCCTGGGTCA--TTG-TTTA-CCCTGACCCC--CTGCCTGGC-CCTGCACCCGGATCTCAGCC------TCTT--------CCCTCTCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89288 248 + 190779 AGGAGACCAAACTGGGAAGGGCTTCTGGGTGTTTCTG-A--CTGACCCCTTTGGCCTGAGAACCCGTGGAC----C-----------------------------------CTGAG-TCATGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTT-GACCAGGCCGTGGGGCGGCAAGGCCCTG--CCTAAAGCCACACGGTAGTCCTGCCCAGTTGGCCTCCCTGGGTCA--TTG-TTTA-CCCTGACCCC--CTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 53781 248 + 106623 AGGAGACCAAACTGGGAAGGGCTTCTGGGTGTTTCTG-A--CTGACCCCTTTGGCCTGAGAACCCGTGGAC----C-----------------------------------CTGAG-TCATGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTT-GACCAGGCCGTGGGGCGGTAAGGCCCTG--CCTAAAGCCACACGGTAGTCCTGCCCAGTTGGCCTCCCTGGGTCA--TTG-TTTA-CCCTGACCCC--CTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871739 251 + 123690457 AGGAGACCAAACTGAGAAAGGCTTCTGGGTGTTTCTG-ACTCTGACCCCTTTGGCCTGAGAACCCGTGGAC----C-----------------------------------CTGAT-TTGTGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTT-GACCAGGCCGTGGGGCTGCAAGGTCCTG--CCTAAAGCCACACAGTAGTCCTTCCCAGTTGGCCTCCCTGGGTCA--TTGTTTTA-CCCTGACCCC--CTGCCTGGC-CCTGCACCGGGATCTCAGCC------TCTT--------CCCTCTCACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462324 248 + 204787373 AGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTG-A--CTGACCCCTTTGGCCTGGGAACCCGTGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTT-GACCAGGCCCTGGGGCTGCAAGGC------CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCCTCCCTGGTTCA--TTA-TTTA-CTCCGACTCC--TTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69559 248 + 192460366 AGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTG-A--CTGACCCCTTTGGCCTGGGAACCCGTGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTT-GACCAGGCCCTGGGGCTGCAAGGC------CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCTTCCCTGGTTCA--TTA-TTTA-CTCCGACTCC--TTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545349 248 + 19675229 AGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTG-A--CTGACCCCTTCGGCCTGGGAACCCGTGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTT-GACCAGGCCCTGGGGCTGCAAGGC------CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCCTCCCTGGTTCA--TTA-TTTA-CTCCGACTCC--TTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484424 249 + 16847902 AGGAGACCAAACCGGTAAGGGCTTCTGGCTGTCTCTG-A--CTGACCCCTTTGGCCTGGGAACCCATGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTT-GACCAGGCCCTGGGGCTGCAAGGC------CCTAAAGCCACATGGTAGTCCTGCCCATTTGGCCTCCCCGGTTCA--TTA-TTTACCCCCGACTCC--TTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418489 252 - 91754291 AGGAGACCAAACCGGTAGGGGCTTCTGGGTGTTTCTG-A--CTGACCCCTTTGGCCTGAGAACCCGTGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTACCTTCTT-GACCAGGCCCTGGGGCTGCGAGGCCCTG--CCTAAAGCCACACGGTGCTCCTGCCCATTTGGCCTCCCTGGTTCA--TTA-TTTA-CCCTGACTCC--CTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577054 248 - 1977891 AGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTG-A--CTGACCCCTTTGGCCTGGGAACCCGTGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTT-GACCAGGCCCTGGGGCTGCAAGGC------CCTAAAGTCACACGGTAGTCCTGCCCATTTGGCCTCCCTGGTTGA--TTA-TTTA-CCCCGACTCC--TTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454364 252 + 7796314 AGGAGACCAAACTGGTAAGGGCTTCTGGGTGTTTCTG-A--CTGACCCCTTTGGCCTGGAAACTTGTGGACCCTGC-----------------------------------CTGAG-TCATGTCTCAGCTCCACCAGCACCTGGTGAGTACCTTCTT-GACCAGGCCCTGGGGCTGCAAAGCCCTG--CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCCTCCCTGGTTCA--TTA-TCTA-CCCTGACTCC--CTGCCTGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937549 246 - 74750902 AGGAAGCCAAAGTAGTAAGGGCTTCTGGGTGTTTCTG-A--CGGATCCCTCTGGCTTGAGAACCCGGGGAC----C-------------------------------------GAG-TCATGTCTTAGTTCCTCCAGCACCTACTGAGCACCGTCTT-GACCGTGCCTGGGGGCTGCAAGGCCCTG--TTTAAAGCCACACGGCAGTGCTGCCCATCCGGCCTCCCTGGGTCA--TTG-TTTA-TGCTGACCCC--CTGACTGGT-CCTGCAACAGGAGCTCAGCC------TCTT--------CCCTCTCGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461265 247 + 17725628 AGGAAACCAAACTAGTAAGGGCTTCTGGGCGTTTCTG-A--CGGATCCCTCTGGCTTGAGAACCTGTGGAC----C-----------------------------------CTGAG-TCATGTCTCAGCTCCGCCAGCCCCTACTGAGCACCGTCTT-GACCACGCCTGGGGGCTGCAGGGCCCTG--CCTGAAGCCACACGGTAGCGCTGCCCAGTGGGCCTCCCTGGGTCA--TTG-TTCA-CCCTGA-CCC--CTGCCTGGT-CCTGCACCAGGAGCTCGGCC------TCTT--------CCCTCTCGCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425695 281 - 6778120 AGGAAACCAAACTAGTCAGGGCTTCTGGGTGTTTCTG-A--TGGATCCCTCTGGCTTGAGAACCGGTGGAC----CCTGAGTCATGTCTCTGGCTTGAGAACCGGTGGACCCTGAG-TCATGTCTTAGCTCTGCCAGCACCTACCGAGCACCGTCTTGGGCCAGGCCTGGGGGCTGCAAGGCCCTG--CCTAAAGCCACACGGTAGTGCTGCCCATCTGGCCTCCCCGGGTCA--TTG-TTTG-CCCTGACCCC--C---CCCGT-CCTGCACCAGGAGCTCAGCC------TCGT--------CCCTCTCACAC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25903912 249 - 114275543 AGGGTGTTGAATTATTAAGGGCTTCTGGATGTTTCTG-A--CTAATCTCTTTGATCTGAGGATCCATGGAC----C-----------------------------------CTGAATCCATGTCTTAGTTCCACCAGTGTCTACTGAGCACCTTCTT-GACCAGGCTCTGGGCCTCCAAGTCCCTG--TCTAAAGTCACACAGGTGTCCTGCCCATTTGGCCTTGCTGGGCCA--TTC-TTTA-CCCTGACCCC--CTACATGGC-CCTGCACCAGGATCTCAGCC------TCTT--------CCCTCTCACAC i micMur3.chr1 C 0 I 116 s proCoq1.NW_012133858v1 7418863 249 + 22200726 AGGGGGCCGAATTATTAAGGGCTTCTGGATGTTTCTG-A--CTGATCTCTTTGATCTGAGGATCCATGGAC----C-----------------------------------CTGCGTCCATGTCttagttccaccagcgtctactgagcaccttctt-gtccaggccctgagcCTGCAAGTCCCTG--TCTAAAGCCACACGGGTGCCCTGCCCATTTGGCCTCGCTGGGCCA--TTT-TTTA-CCCTGACCCC--CCACATGGC-CCTGCACCAGGATCTCAGCC------TCTA--------CCCTCTCACAC i proCoq1.NW_012133858v1 C 0 I 113 s otoGar3.GL873829 416990 242 - 608964 agGGGGCTGAATTATTAATAGCTTCTGGTTGTTTCTG-C--CTGATCTCTCAGATATGAGGATCAATAGAC----------------------------------------------CCATGTCTTAGTTCCACCAGCATCTACTGAACACCTTCTT-GACCAGCCCATGGACCTACAAGTCCCTG--TCTAAAGCCACATAAGTGTCCTGCCTGTTTGATCTCCCTGAGCCA--TTC-TCTA-CCCCGATTCC--CTATCTGGC-CCTGCACCAAGAGCTCAGCC------TCTT--------CCCTCTCATAC i otoGar3.GL873829 I 581 C 0 s mm10.chr16 65432042 164 - 98207768 ------ACAAGCTG--AAGACCACCTGCC------------CTGACACTTCTGTCATGAGAAGCC----------C-----------------------------------------CGCTGTCTCAGTCCCTCCAGC-----------ACCGTCCT-GAACAGGCC--AAGACTGTGAGTACCTT--CCCAAAGC-------------------------------------------TACA-C---AATCCC--CCGCCTGGC-CCTGTAGCAGGCTCTCAGCT------TCGC--------CTCTCTCAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29069103 195 + 31377067 GGGAGACCGACC----------------GTGTTTCTG-CGCCCCCCACCCCGGGCCTGGGAACCCACAGAC----T-----------------------------------CCGAGTCCCCGTCCCGATCCTGCCAGCACGTGCCGAGCGCCG-----GAGCCCGCTGTGGTCCTGC-----------TCCGA-----------------GCCCCCTGGGCCTCGCTGGACGG--TTC-TCTC-CCCGACCGCT--CTGCCCGGTGCCAGCCCTGGGACCCCAGCC------GCAC------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3893921 271 + 6579706 -AGGAGCTGAACCATTAAGGGCTGCTCAGCATTTCTGTG--CTGGGATCTCTGGTCTGAGAATCCAGGGAC----C-----------------------------------CTAAGCCCTTGTTTTAATTCAGACAGCATCTACTGAACCCCTTCTTTGGCCATTCCTGGGGCCTACAAGTCCCTGTTTCAAAGGGCACATGGTCCTCCTGCTCATTCAGCCTCCCTGGGCCAGGTCT-TTTA-TCCTGACCCCAGCTATCTGGCGCCTGCACCAGGATTCCAGCCATCCTGTCTTTTTCACAACCCACTCACAC i dasNov3.JH569502 C 0 C 0 a score=375816.000000 s hg38.chr3_KI270779v1_alt 125147 32 + 205312 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT s panTro5.chr3 200114241 32 + 202621043 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89536 32 + 190779 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54029 32 + 106623 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120871990 32 + 123690457 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462572 32 + 204787373 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69807 32 + 192460366 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545597 32 + 19675229 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484673 32 + 16847902 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418741 32 - 91754291 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577302 32 - 1977891 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454616 32 + 7796314 TCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937795 32 - 74750902 TCTAGCTCCTTGCCTAAAATCCTTTCTAGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461512 32 + 17725628 TCTAGGTCCTTGCCTGAAATCCTTTCTAGAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 425976 32 - 6778120 TGTAGCTCCTTGCCTAAAATGCTTTCCAGAGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417232 22 - 608964 CATATCTCCTTGCC----------TCTACAGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65432206 32 - 98207768 CATACCTCCTTCTCTGGAATCCTTGGTAGAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29069298 32 + 31377067 CACATCTCCTTGCCCGAACCCCTTCTTAGAGT i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3894192 32 + 6579706 CATATCTTCTTGCCTGAAAACCTTTCTAGAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I a score=57069.000000 s hg38.chr3_KI270779v1_alt 125179 4 + 205312 AAGA s panTro5.chr3 200114273 4 + 202621043 AAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89568 4 + 190779 AAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54061 4 + 106623 AAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872022 4 + 123690457 AAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462604 4 + 204787373 AAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69839 4 + 192460366 AAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545629 4 + 19675229 AAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484705 4 + 16847902 AAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418773 4 - 91754291 AAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577334 4 - 1977891 AAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454648 4 + 7796314 AAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937827 4 - 74750902 AAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461544 4 + 17725628 AAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426008 4 - 6778120 AAGA i cebCap1.NW_016107444v1 C 0 I 116 s otoGar3.GL873829 417254 4 - 608964 AAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65432238 4 - 98207768 AAGA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3894224 4 + 6579706 AAGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e canFam3.chr33 29069330 4 + 31377067 I a score=42560.000000 s hg38.chr3_KI270779v1_alt 125183 5 + 205312 TGGGG s panTro5.chr3 200114277 5 + 202621043 TGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89572 5 + 190779 TGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54065 5 + 106623 TGGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872026 5 + 123690457 TGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462608 5 + 204787373 CGGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69843 5 + 192460366 CGGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545633 5 + 19675229 CGGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484709 5 + 16847902 CAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418777 5 - 91754291 CGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577338 5 - 1977891 CGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454652 5 + 7796314 CGGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937831 5 - 74750902 CAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461548 5 + 17725628 CAGGg i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 417258 5 - 608964 CAGAg i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65432242 5 - 98207768 TAGGG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3894228 5 + 6579706 CAGAG i dasNov3.JH569502 C 0 I 53 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I a score=4278.000000 s hg38.chr3_KI270779v1_alt 125188 1 + 205312 G s panTro5.chr3 200114282 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89577 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54070 1 + 106623 G i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872031 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462613 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69848 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545638 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484714 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418782 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577343 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454657 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937836 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461553 1 + 17725628 g i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 417263 1 - 608964 a i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65432247 1 - 98207768 G i mm10.chr16 C 0 I 468 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I a score=236918.000000 s hg38.chr3_KI270779v1_alt 125189 35 + 205312 atgcatgaatgattgaagcatg----aatgaatgaatga s panTro5.chr3 200114283 35 + 202621043 atgcatgaatgattgaagcatg----aatgaatgaatga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89578 35 + 190779 atgcatgaatgattgaagcatg----aatgaatgaatga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54071 35 + 106623 atgcatgaatgattgaagcatg----aatgaatgaatga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872032 35 + 123690457 atgcatgaatgattgaagcatt----aatgaatgaatga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462614 35 + 204787373 ATGCGTGAATGATTGAAGCATT----Aatgaatgaatga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69849 35 + 192460366 ATGCGTGAATGATTGAAGCATT----Aatgaatgaatga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545639 35 + 19675229 ATGCGTGAATGATTGAAGCATT----Aatgaatgaatga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484715 35 + 16847902 ATGCGTGAATGATTGAAGCATT----Aatgaatgaatga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418783 39 - 91754291 atgcatgaatgattgaagcattaatgaatgaatgaatga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577344 35 - 1977891 ATGCGTGAATGATTGAAGCATT----Aatgaatgaatga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454658 35 + 7796314 ATGTGTGAATAATTGAAGCATT----AAGGAatgaatga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937837 32 - 74750902 atgaatgaatgattga---ctg----aatgcatgaatga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 461554 28 + 17725628 atgaatgaatgat-------tg----aatgcgtgactga i saiBol1.JH378146 C 0 I 5 s otoGar3.GL873829 417264 24 - 608964 atgaatgagtg---------------aatgaattagtga i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I a score=37239.000000 s hg38.chr3_KI270779v1_alt 125224 8 + 205312 --atgtatcc s panTro5.chr3 200114318 8 + 202621043 --atgtatcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89613 8 + 190779 --atgtatcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54106 8 + 106623 --atgtatcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872067 8 + 123690457 --atgtatcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462649 8 + 204787373 --atgtatcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69884 8 + 192460366 --atgtatcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545674 8 + 19675229 --atgtatcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484750 8 + 16847902 --atgtatcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418822 8 - 91754291 --atgtatcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577379 8 - 1977891 --atgtatcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454693 8 + 7796314 --atgtatcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 937869 1 - 74750902 ------a--- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 417288 8 - 608964 atgTGTAT-- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e saiBol1.JH378146 461582 5 + 17725628 I a score=23276.000000 s hg38.chr3_KI270779v1_alt 125232 4 + 205312 atgt s panTro5.chr3 200114326 4 + 202621043 atgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89621 4 + 190779 atgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54114 4 + 106623 atgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872075 4 + 123690457 atgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462657 4 + 204787373 atgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69892 4 + 192460366 atgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545682 4 + 19675229 atgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484758 4 + 16847902 atgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418830 4 - 91754291 gtgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577387 4 - 1977891 atgt i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 417296 4 - 608964 ATGT i otoGar3.GL873829 C 0 I 12 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e calJac3.chr17 937870 0 - 74750902 C e saiBol1.JH378146 461582 5 + 17725628 I e colAng1.NW_012118932v1 454701 0 + 7796314 C a score=1999.000000 s hg38.chr3_KI270779v1_alt 125236 4 + 205312 atag s panTro5.chr3 200114330 4 + 202621043 atag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89625 4 + 190779 atag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54118 4 + 106623 atag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872079 3 + 123690457 aca- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462661 4 + 204787373 atct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69896 4 + 192460366 atct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545686 4 + 19675229 atct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484762 4 + 16847902 atct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418834 4 - 91754291 atgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577391 4 - 1977891 atct i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e calJac3.chr17 937870 0 - 74750902 C e saiBol1.JH378146 461582 5 + 17725628 I e colAng1.NW_012118932v1 454701 0 + 7796314 C a score=64346.000000 s hg38.chr3_KI270779v1_alt 125240 32 + 205312 atgtatgtatccatgtatgtatgtatccatgt s panTro5.chr3 200114334 16 + 202621043 ----------------atgtatgtatccatgt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 54122 16 + 106623 ----------------atgtatgtatccacgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872082 17 + 123690457 ---------------tatgtgtgtatccatgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462665 16 + 204787373 ----------------atgtatgtatccatgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69900 16 + 192460366 ----------------atgtatgtatccatgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545690 16 + 19675229 ----------------atgtatgtatccatgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484766 16 + 16847902 ----------------atgtatgtattcatgt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418838 16 - 91754291 ----------------atgtatgtatccatgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 577395 16 - 1977891 ----------------atgtatgtatccatgt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 937870 32 - 74750902 ATGAGTGTGTACGTGTATGTATGTATGCATGT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e panPan2.chrUn_NW_014024201v1 89629 0 + 190779 C e saiBol1.JH378146 461582 5 + 17725628 I e colAng1.NW_012118932v1 454701 0 + 7796314 C a score=131375.000000 s hg38.chr3_KI270779v1_alt 125272 72 + 205312 atgt-------atgtgtgtatccatgcatgtatgc----atgtatgtatccatgtg----tgtatccatgt--------gtgtatgtat-catgta-------------------- s panTro5.chr3 200114350 68 + 202621043 atgt-------atgtgtgtatccatgcatgtatgc--------atgtatccatgtg----tgtatccatgt--------gtgtatgtat-catgta-------------------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 54138 81 + 106623 atgt-------atgtgtgtatccatgcatgtatgtatccatgtgtgtatccatgtgtgtatgtatccatgt--------gtgtatgtatccatgtg-------------------- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872099 46 + 123690457 atgc-------atgtgtgtatctatgcatgca----------------------------tgtatccacgt--------atgtgtgtat--------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462681 95 + 204787373 atgt-------atatatgtat-catgtgtgtatat--------atccatgcacgta----tatatccacgtatgtatcaatgtatgtat-catgtatgtatgtatccatgtgtgta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 69916 93 + 192460366 atgt-------atatatgtat-catgtgtgtatat--------atccatgcacgta----tatatccacgtatgtatcaatgtatgtat-catgtatgtatgtatcc--gtgtgta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545706 93 + 19675229 atgt-------atatatgtat-catgtgtgtatat--------atccatgcacgta----tatatccacgtatgtataaatgtatgtat-catgtatgtatgtatcc--atgtgta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484782 95 + 16847902 gtgt-------atatatgtat-cacgtgtgtatat--------atccatgcacgta----tgtatccacgtatgtatcaatgtatgtat-catgtatgtatgtatccatgtatgta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418854 75 - 91754291 atgtgtgtatcatgtatgtatccatgcatgtatgt--------aaccatgtatgta----tgtatccatgt--------atgtatgtat-catgca-------------------- i chlSab2.chr15 C 0 I 4 s manLeu1.NW_012102020v1 577411 71 - 1977891 atgt-------atatatgtat-catgtgtgtatat--------atcaatgcacgta----tgtatccacgt----atcaatgtatgtat-catgta-------------------- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e panPan2.chrUn_NW_014024201v1 89629 0 + 190779 C e calJac3.chr17 937902 0 - 74750902 C e saiBol1.JH378146 461582 5 + 17725628 I e colAng1.NW_012118932v1 454701 0 + 7796314 C a score=36036.000000 s hg38.chr3_KI270779v1_alt 125344 27 + 205312 tgtatccatgtagatatgtatca-atgt s panTro5.chr3 200114418 27 + 202621043 tgtatccatgtagagatgtatca-atgt i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 54219 23 + 106623 tgtatccatgtatccatgt-----gtgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872145 6 + 123690457 -gtatcc--------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462776 28 + 204787373 tgtatccatgcatgtatgtatcgtatgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70009 28 + 192460366 tgtatccatgcatgtatgtatcgtatgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545799 28 + 19675229 tgtatccatgcatgtacgtatcgtatgc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484877 28 + 16847902 tgtatccatgcatgtacgtatcgtatgc i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 577482 24 - 1977891 tgtatccatgcatgtatgtatcgt---- i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e panPan2.chrUn_NW_014024201v1 89629 0 + 190779 C e calJac3.chr17 937902 0 - 74750902 C e saiBol1.JH378146 461582 5 + 17725628 I e colAng1.NW_012118932v1 454701 0 + 7796314 C e chlSab2.chr15 418929 4 - 91754291 I a score=19333.000000 s hg38.chr3_KI270779v1_alt 125371 8 + 205312 atgtatcc s panTro5.chr3 200114445 8 + 202621043 atgtatcc i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000576v1 54242 7 + 106623 atgtatc- i gorGor5.CYUI01000576v1 C 0 C 0 s rheMac8.chr2 202462804 8 + 204787373 atgtatca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70037 8 + 192460366 atgtatca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545827 8 + 19675229 atgtatca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484905 8 + 16847902 atgtatca i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 577506 8 - 1977891 atgtatca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454701 8 + 7796314 atgtatct i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e panPan2.chrUn_NW_014024201v1 89629 0 + 190779 C e calJac3.chr17 937902 0 - 74750902 C e saiBol1.JH378146 461582 5 + 17725628 I e chlSab2.chr15 418929 4 - 91754291 I e nomLeu3.chr11 120872151 0 + 123690457 C a score=191971.000000 s hg38.chr3_KI270779v1_alt 125379 85 + 205312 atgtatgtat---ccatgtatgtatgtgtgtgt-c----atgcatgtatgcatgt------------atccatgtatgtatccata--tgtgtgtatc---catgtgtgt s panTro5.chr3 200114453 88 + 202621043 atgtatgtat---ccatgtatgtatgtgtgtatcc----atgcacgtatgcatgt------------atccatgtatgtatccatatgtgtgtgtatc---catgtgtgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89629 88 + 190779 atgtatgtat---ccatgtatgtatgtgtgtatcc----atgcatgtatgcatgt------------atccatgtatgtatccatatgtgtgtgtatc---catgtgtgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54249 58 + 106623 -----------------------atgtgtgtatcc----atgtatgtatccatg------------------tgtgtgtatccatgtatgtatgtatc---ca----tgt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872151 66 + 123690457 ---------------gtgtatgtatccgtgtgt--------gtatgtatccatg------------------tgtatgtatccatatgtgtatgtatc---catgtgtgt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462812 100 + 204787373 atgtatgtatgtatcatgtatgtatgcatgtatcc----atgtatgtatgtatccatgtatgtatcaatgtatgtatatatccatgtatgtgtat------catgtatgt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70045 100 + 192460366 atgtatgtatgtatcatgtatgtatgcatgtatcc----atgtatgtatgtatccatgtatgtatcaatgtatgtatatatccatgtatgtgtat------catgtatgt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545835 104 + 19675229 atgtatgtatgtatcatgtatgtatgcatgtatccatgtatgtatgtatgtatccatgtatgtatcaatgtatgtatatatccatgtatgtgtat------catgtatgt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 484913 94 + 16847902 atgtatgtat--------catgtatgtatgtatcc----atgtatgtatgtatcc----atgtatcaatgtatgtatatatccatgtatgtgtgtatcatgtatgtatgt i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 577514 82 - 1977891 atgtgtgtat------------------------c----atgtatgtatgtatccatgtatgtatcaatgtatgtatatatccatgtatgtgtgtatcatgtatgtatgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454709 86 + 7796314 atgtatgtat---ccatgtatgtatatatgtat-c----atgtgtgtatatatcc------------atgcatgtatgtatccatgtatgtat----catgtatgtatgt i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e calJac3.chr17 937902 0 - 74750902 C e saiBol1.JH378146 461582 5 + 17725628 I e chlSab2.chr15 418929 4 - 91754291 I a score=59333.000000 s hg38.chr3_KI270779v1_alt 125464 13 + 205312 atgtatccatgtg s panTro5.chr3 200114541 13 + 202621043 atgtatccatgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89717 13 + 190779 atgtatccatgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54307 13 + 106623 atgtatccatgtg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872217 13 + 123690457 atgcatccatgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462912 13 + 204787373 atgtatcaatgta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70145 13 + 192460366 atgtatcaatata i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545939 13 + 19675229 atgtatcaatgta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485007 13 + 16847902 atgtatcaatgta i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 577596 13 - 1977891 atgtatcaatgta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454795 13 + 7796314 atgtatccatgta i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 461587 13 + 17725628 gtgtgtgcgtgtg i saiBol1.JH378146 I 5 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e calJac3.chr17 937902 0 - 74750902 C e chlSab2.chr15 418929 4 - 91754291 I a score=59725.000000 s hg38.chr3_KI270779v1_alt 125477 16 + 205312 tgt---atgtatccatgta s panTro5.chr3 200114554 16 + 202621043 tgt---atgtatccatgta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89730 16 + 190779 tgt---atgtatccatgta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54320 16 + 106623 tat---atgtatccatgta i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872230 16 + 123690457 tgt---atgtatccatgta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462925 19 + 204787373 tgtatcatgtatgtgtgta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70158 19 + 192460366 tgtatcatgtatgtgtgta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 545952 19 + 19675229 tgtatcatgtatgtgtgta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485020 19 + 16847902 tgtatcatgtatgtgtgta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 418933 15 - 91754291 tgtatcatgta----tgta i chlSab2.chr15 I 4 C 0 s manLeu1.NW_012102020v1 577609 19 - 1977891 tgtatcatgtatgtgtgta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 454808 8 + 7796314 -----------tgtatgta i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 461600 16 + 17725628 tgt---atgtatgcatgta i saiBol1.JH378146 C 0 I 3 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I e calJac3.chr17 937902 0 - 74750902 C a score=208389.000000 s hg38.chr3_KI270779v1_alt 125493 27 + 205312 tgtCCTATTGCTTGAAAACTGGAttcc s panTro5.chr3 200114570 27 + 202621043 tgtCCTATTGCTTGAAAACTGGAttcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89746 27 + 190779 tgtCCTATTGCTTGAAAACTGGAttcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54336 27 + 106623 tgtCCTATTGCTTGAAAACTGGATTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872246 27 + 123690457 tgtTCTATTGCTTGAAAACTGGAttcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462944 27 + 204787373 tgtactatTGCTTGAAAACTGGAttcc i rheMac8.chr2 C 0 I 8 s macFas5.chr2 70177 27 + 192460366 tgtactatTGCTTGAAAACTGGATTCC i macFas5.chr2 C 0 I 4 s macNem1.NW_012014355v1 545971 27 + 19675229 tgtactatTGCTTGAAAACTGGAttcc i macNem1.NW_012014355v1 C 0 I 8 s cerAty1.NW_012004056v1 485039 27 + 16847902 tgtaCTATTGCTTGAAAACTGGAttcc i cerAty1.NW_012004056v1 C 0 I 8 s chlSab2.chr15 418948 27 - 91754291 tgtTCTGTTGCTTGAAAGCTGGACTCC i chlSab2.chr15 C 0 I 8 s manLeu1.NW_012102020v1 577628 27 - 1977891 tgtaCTATTGCTTGAAAACTGGAttcc i manLeu1.NW_012102020v1 C 0 I 8 s colAng1.NW_012118932v1 454816 27 + 7796314 tgtTCTATTGCTTGAAAACTGGATTCC i colAng1.NW_012118932v1 C 0 I 8 s calJac3.chr17 937902 27 - 74750902 TCTACTATTGCTTGAAAACTGGATTCC i calJac3.chr17 C 0 I 8 s saiBol1.JH378146 461619 27 + 17725628 TCTACTATTGCCTGAAAACTGGATTCC i saiBol1.JH378146 I 3 I 8 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I e cebCap1.NW_016107444v1 426012 116 - 6778120 I a score=3597018.000000 s hg38.chr3_KI270779v1_alt 125520 440 + 205312 ttatttattttgagacagggtcccactcggttgcccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctccc------gaggagctggggctacaggcatgcaccaccacgcccactaatttttgtatttttc-----------------ttctgctttttttttt-aatgagac--agtctcgttctgtttcccacgctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccaagttaaagcaattcttgtgcctcagcctcccaaatacttgagattacaggcatatgccaccacgcccagctaattttttgatttttagtagagacagggtcttgccatattgcccaggctggtctcaaagtcctgagctcaagcaatccgcctgcctcaggctcctaTGTGGCC s panTro5.chr3 200114597 440 + 202621043 ttatttattttgagacagggtcccactcggttgcccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaagttc--aagccatcctcccacct--cagcctccc------gaggagctggggctacaggcatgcaccaccacgcccACTAAtttttgtatttttc-----------------ttctgctttttttttt-tatgagac--agtctcgttctgtttcccacgctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccaagttaaagcaattcttgtgcctcagcctcccaaatacttgagattacaggcatatgccaccacgcccagctgattttttgatttttagtagagacagggtcttgccatattgcccaggctggtctcaaagtcctgagctcaagcaatccgcctgcctcaggctccTGTGTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 89773 439 + 190779 ttatttattttgagacagggtcccactcggttgcccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaagttc--aagccatcctcccacct--cagcctccc------gaggagctggggctacaggcatgcaccaccacgcccACTAAtttttgtatttttc-----------------ttctgctttttttttt--atgagac--agtctcgttctgtttcccacgctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccaagttaaagcaattcttgggcctcagcctcccaaatacttgagattacaggcatatgccaccacgcccagctaattttttgatttttagtagagacagggtcttgccatattgcccaggctggtctcaaagtcctgagctcaagcaatccgcctgcctcaggctccTGTGTGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54363 440 + 106623 ttatttattttgagacagggtcccactcggttgcccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctccc------gaggagctgggactacaggcatgcaccaccatgcccactaatttttgtatttttc-----------------ttctgctttttttttt-aatgagac--agtctcgttctgtttcccacgctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccaagctaaagcaattcttgtgcctcagcctcccaaatacttgagattacaggcatatgccaccacgcccagctaattttttgatttttaatagagacagggtcttgccatattgcccaggctggtctcaaagtcctgagctcaagcaatccgcctgcctcaggctcctaTGTGGCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872273 441 + 123690457 ttatttattttgagacagggtcccactgtgtcacccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcttccc------aaggagctgggactacaggcatgcaccaccacgcccACTAAtttttgtatttttc-----------------ttctgctttttttttttaatgagac--aatctcattctgtttcccaggctgcagtgcagtgtctcgatctcggctcattgcaatgtcccccgcccaagttaaagcaattcttgtgcctcagcctcccaaatagttgagattacaggcatatgccaacacgcccagctaattttttgatttttagtagagacacggtcttgccatattgcccaggctgatctcaaagtcctgagctcaagcaatccgcctgcctcaggctccTGTGTGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202462979 436 + 204787373 ttattta-tttgagacagggtcgcactatgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccACTAAtttttgtatttttc-----------------tttttcttttttt----tatgagac--agtctcgttctgttttccaggctgcagtgtaatgtctcgatctcggctcactgcaatgtccccctcctgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacagcgtcttcacatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggctcctaTGTGGCC i rheMac8.chr2 I 8 C 0 s macFas5.chr2 70208 437 + 192460366 ttatttattttgagacagggtcgcactatgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccactaatttttgtatttttc-----------------tttttcttttttt----tatgagac--agtctcgttctgttttccaggctgcagtgtaatgtcttgatctcggctcactgcaatgtccccctcctgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacagcgtcttcacatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggctcctaTGTGGCC i macFas5.chr2 I 4 C 0 s macNem1.NW_012014355v1 546006 437 + 19675229 ttatttatttttagacagggtcgcactatgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccACTAAtttttgtatttttc-----------------tttttcttttttt----tatgagac--agtctcgttctgttttccaggctgcagtgtaatgtctcgatctcggctcactgcaatgtccccctcctgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacagcgtcttcacatattgcccaggctggtctcgaagtcctgagcccaagcaatccacctgcctcaggcttctaTGTGGCC i macNem1.NW_012014355v1 I 8 C 0 s cerAty1.NW_012004056v1 485074 437 + 16847902 ttatttattttgagacagggtcacactctgtcacccaggctggagtgcagtgtcttgatcttggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccACTAAtttttgtatttttc-----------------tttttcttttttt----tatgagac--agtctcgttctgttttccaggctgcagtgcaatgtctcgatctcggctcactgcaatgtccccctcccgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacaatgtcttcacatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggcttctaTGTGGCC i cerAty1.NW_012004056v1 I 8 C 0 s chlSab2.chr15 418983 436 - 91754291 ttatttattttgagacagggtcgtactccgtcgcccaggctggagtgcagtgttttgatctcagctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcttgtaccaccatgcccACCAGtttttgtatttttc-----------------tttttc-tttttt----tatgagac--agtcttgttctgttttccaggctgcagtgcagtgtctcgatctcagctcactgcaatgtccccctcccgagttaaagcaattattgtacctcagcctcccaaatagctgggattacaggcatatgccaccacgcccagctaattttttgatttttagtagagacagcatcttgccatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggctcctaTGTGGCC i chlSab2.chr15 I 8 C 0 s manLeu1.NW_012102020v1 577663 437 - 1977891 ttatttattttgagacagggtcgcactctgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccACTAAtttttgtattttcc-----------------tttttcttttttt----tatgagac--agtctcgttctgttttccaggctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacagcgtcttcacatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggcttctaTGTGACC i manLeu1.NW_012102020v1 I 8 C 0 s colAng1.NW_012118932v1 454851 437 + 7796314 ttatttattttgagacagggtcccactctgttgcccaggctggaatgcagtgtcttgatattggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccgctaatttttgtatttttc-----------------tttttcttttttt----gatgagac--agtctcgttctgttttccaggctgcagtgtaatgtctcgatcttggctcactgcaatgtccccctcccgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccacgcccagctaatttttttatttttagtagagacagcgtcttgccatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggctcctaTGTGGCC i colAng1.NW_012118932v1 I 8 C 0 s calJac3.chr17 937937 441 - 74750902 ttatttattttgagacagggtctcactctgtcacccaggttggagtgcagtgtcttgatctctgctcactgcaacctccgcct-ccaggctcaaaagctatcctcccgcctcccatcctcccactagggaggggccaggactacaggcatgctctattatgcccAC---tttttgtatttttc--------------------tttttttttt----tatgagacagagtcgcattctgttgcccc-gctggagtgtagtgtttcaatatcggctcactgcaacgtccacctcccgagttaaagcaattcttgtgcctcagcctcccgaaaagctgggattacaggcacgtgccaccatgcccagctaattttttgatttttagtagacatggggtctggtcatattgcccaggctggtctcgaagtcctgagctcaagcaatctgcctgcctcagcctcccaTGTGGCC i calJac3.chr17 I 8 C 0 s saiBol1.JH378146 461654 455 + 17725628 ttatttattttgagacagtgtctcagtctgtcacccaggttggagggcagtgtctcgatctctgctcactgcaacctccacct-ccaggctcaaaagctgtcctcccacctcccagcctcccactagggaggggctgggactacaggcgtgtgctatcatgcccAC---TTTTTGTATTTCTC---tctctctctctcttttttttttttttt----aatgaggcagagtctcattctgttgccca-gctggagtgtagtgtctcagtctcggctcactgcaatgtccacctcccgaatgaaagcaattcttgtgcctcagcctcccgaaaagctgggattacaggcatgtgccaccaggcccagctaattttttgatttttagtagacatggggtctggccatattgcccaggctggtt---aagtcctgagctcaagcagtctgcctgcctcagcctcccaTGTGGCC i saiBol1.JH378146 I 8 C 0 s cebCap1.NW_016107444v1 426128 461 - 6778120 ttatttatgttgagacagggtctcaccctgtcacccgggttggagtgcagtgtcttgatctctgctcactgcaaactccacct-ccaggctcaaaagctgtcctcccacctcccatcctcccactagggaggagctgggactacagacatgtgctatcatgcccac---tttttgtatttttcttttctttctttcttttttttttttttttt----tatgaggcagagtctcattctgttgccca-gctggagtgtagtgtctcaatctcggctcactgctatgtcctcctccagagttaaagcaattcttgtgcctcagcctcctgaaaagctgggatgacaggcatgtgccaacacacccagctaattttttgatttttagtagacacggggtctggccatattgtccaggctggtctcggagtcctgagctcaagcaatccgcctgcttcatcctcccatgtggcc i cebCap1.NW_016107444v1 I 116 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e otoGar3.GL873829 417300 12 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I a score=28635.000000 s hg38.chr3_KI270779v1_alt 125960 3 + 205312 TGC s panTro5.chr3 200115037 3 + 202621043 TGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90212 3 + 190779 TGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54803 3 + 106623 TGC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872714 3 + 123690457 TGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463415 3 + 204787373 TGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70645 3 + 192460366 TGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546443 3 + 19675229 TGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485511 3 + 16847902 GGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419419 3 - 91754291 TGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578100 3 - 1977891 TGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455288 3 + 7796314 TGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938378 3 - 74750902 TGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 462109 3 + 17725628 TGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426589 3 - 6778120 tgc i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417312 3 - 608964 TGA i otoGar3.GL873829 I 12 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3894233 53 + 6579706 I e canFam3.chr33 29069330 4 + 31377067 I a score=236498.000000 s hg38.chr3_KI270779v1_alt 125963 29 + 205312 AAACTGGATTTCATATAAGCTGAAA---------TTGA s panTro5.chr3 200115040 29 + 202621043 AAACTGGATTTCATATAAGCTGAAA---------TTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90215 29 + 190779 AAACTGGATTTCATATAAGCTGAAA---------TTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54806 29 + 106623 AAACTGGATTTGATATAAGCTGAAA---------TTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872717 29 + 123690457 AAACTGGATTCCATAGAAGCTGAAA---------TTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463418 31 + 204787373 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70648 31 + 192460366 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546446 31 + 19675229 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485514 31 + 16847902 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419422 31 - 91754291 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578103 31 - 1977891 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455291 31 + 7796314 AAACTGGATTTCATATAAGCTGACAT-------TTTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938381 31 - 74750902 AAACTGGATTTCATATAAGCTGAAGT-------TTTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 462112 31 + 17725628 AAACTGGATTTCATATAAGCTGAAGT-------TTTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426592 30 - 6778120 aaactggatttcatcTAAGCTGAAG--------TTTGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417315 37 - 608964 AAACTGGATTCCATATAAGCTACTGTGTCTTTCTCTA- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3894286 29 + 6579706 AAACTTGATCTCACGGAGACTGCAG---------GTAA i dasNov3.JH569502 I 53 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e micMur3.chr1 25904161 116 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=15300.000000 s hg38.chr3_KI270779v1_alt 125992 1 + 205312 C s panTro5.chr3 200115069 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90244 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54835 1 + 106623 C i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872746 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463449 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70679 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546477 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485545 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419453 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578134 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455322 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938412 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 462143 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426622 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25904277 1 - 114275543 C i micMur3.chr1 I 116 C 0 s otoGar3.GL873829 417352 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3894315 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419112 113 + 22200726 I e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=593202.000000 s hg38.chr3_KI270779v1_alt 125993 51 + 205312 ----------CTCCCTTGCTGACTCCCAAACCAAGAAGACAGAGCCTCCCTGCTGAGCACT s panTro5.chr3 200115070 51 + 202621043 ----------CTCCCTTGCTGACTCCCAAACCAAGAAGACAGAGACTCCCTGCTGAGCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90245 51 + 190779 ----------CTCCCTTGCTGACTCCCAAACCAAGAAGACAGAGCCTCCCTGCTGAGCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54836 51 + 106623 ----------CGCCCTTGCTGACTCCCAAACCAAGAAGACGGAGCCTCCCTGCTGAGCACT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872747 51 + 123690457 ----------CTCCCTTGTTGACTCCTAGACCAAGAACACAGAGCCTCCCTGCTGAGCACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463450 50 + 204787373 ----------CTCCCTTGCTGACTCCCAAACCAAGAAGACGGAACCTCCCTGCTAAGTAC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70680 50 + 192460366 ----------CTCCCTTGCTGACTCCCAAACCAAGAAGACGGAACCTCCCTGCTAAGTAC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546478 50 + 19675229 ----------CTCCCTTGCTGACCCCCAAACCAAGAAGACGGAACCTCCCTGCTAAGTAC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485546 50 + 16847902 ----------CTCCCTTGCTGACCCCCAAACCAAGACGACAGAACCTCTCTGCTAAGTAC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419454 50 - 91754291 ----------CTCCCTTGCTGACCCCCAAACCAAGAAGACAGAACCTCCCTGCTAAGTAC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578135 50 - 1977891 ----------CTCCCTTGCTGACCCCCAAACCAAGAAGACGGAACCTCCCTGCTAAGTAC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455323 50 + 7796314 ----------CTCCGTTGCTGACTCCCAAACCAAGAAGACAGAACCTCCCTGCTAAGTAC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938413 51 - 74750902 ----------CTCCTTTGCTGACTCCCGAGCCAGGAAGACAGAGCCTCCCTGCTAAGCACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 462144 51 + 17725628 ----------CTCCTTTGCTGACTCCCAAGCCAGGAAAACAGAGCCTCCCTGCTAAGCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426623 51 - 6778120 ----------CTCCTTTGCTGACTCCCAAGCCAGGAAGACAGAGCCTCCCTGCTAAGCACC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25904278 51 - 114275543 ----------CTCCCTTCCTGACTCCCAAACCAAGAAGTCAGAGTCTCACTGCTAAGCACT i micMur3.chr1 C 0 I 244 s proCoq1.NW_012133858v1 7419225 51 + 22200726 ----------CTCCCTTCCTGACTCCCAAACCAAGAAGACAGAGCCTCACTGCTAAGTACC i proCoq1.NW_012133858v1 I 113 C 0 s otoGar3.GL873829 417353 51 - 608964 ----------CTTCCTTCTTGACACCCAAACCAGGAAGACAGACCCTCACCTCTAAGCACC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3894316 61 + 6579706 TTGCTCCACCTCTCCTTGCTGACCCCGAGACCAGTGATGCAGAGATTGACTGCTCAGCGCA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=175534.000000 s hg38.chr3_KI270779v1_alt 126044 21 + 205312 -GTGAGAAAACACAGCAGCCAG s panTro5.chr3 200115121 21 + 202621043 -GTGAGAAAACACAGCAGCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90296 21 + 190779 -GTGAGAAAACACAGCAGCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54887 21 + 106623 -GTGAGAAAACACAGCAGCCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872798 21 + 123690457 -GTGAGAAAACGCAGCAGCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463500 20 + 204787373 --TGAGAAAACACAGCAACCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70730 20 + 192460366 --TGAGAAAACACAGCAACCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546528 20 + 19675229 --TGAGAAAACACAGCAACCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485596 20 + 16847902 --TGAGAAAACGCAGCAACCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419504 20 - 91754291 --TGAGAAAACGCAGCAACCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578185 20 - 1977891 --TGAGAAAACACAGCAACCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455373 20 + 7796314 --TGAGAAAACGCGGCAACCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938464 21 - 74750902 -GTAAGAAAATGCAGCAACCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 462195 21 + 17725628 -GTAAGAAAACGCAGCAACCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426674 20 - 6778120 -GTAAG-AAATGCAGCAACCAG i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7419276 21 + 22200726 -ATGAGAAGACACAACAACCAG i proCoq1.NW_012133858v1 C 0 I 122 s otoGar3.GL873829 417404 13 - 608964 -ATGAGAA--------AACCAG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3894377 22 + 6579706 ATGGAAAACAGGCAGAACCCAA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25904329 244 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=712043.000000 s hg38.chr3_KI270779v1_alt 126065 98 + 205312 TACAGCAGCTCAGCAAAGGCT-GC-----GGCGCC-GAGACCTCACCAAGCTCCCTGCGCTCCCCTTTCTAACTCCC--TTACTGAAGCGACTCGGGGAATC-TCCCT s panTro5.chr3 200115142 97 + 202621043 TACAGCAGCTCAGCAAAGGCT-GC-----GGCGCC-GAGACCTCACCAAGCTCCCTG-GCTCCCCTTTCTAACTCCC--TTACTGAAGCGACTCGGGGAATC-TCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90317 97 + 190779 TACAGCAGCTCAGCAAAGGCT-GC-----GGCGCC-GAGACCTCACCAAGCTCCCTG-GCTCCCCTTTCTAACTCCC--TTACTGAAGCGACTCAGGGTATC-TCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 54908 98 + 106623 TACAGCAGCTCAGCAAAGGCT-GC-----GGCGCC-GAGACCTCACCAAGCTCCCTGCGCTCCCCTTTCTAACTCCC--TTACTGAAGCGACTCGGGGAATC-TCCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872819 98 + 123690457 AACAACAGCGCAGCAAAGGCT-GC-----GGCGCC-CAGGCCTCACCAAGCTCCCTGCACTTCCCTTTCTAACTCCC--TTACTGAATCGACTCAGGGAATC-TCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463520 96 + 204787373 AACAACAGCCCAGCAAAGGCT-GT-----GGCTCC-AATATCTCCCCATGCTCCCTGCACTCCCCTTTCTAACTCCC--TTACTGAAGCAACTCGGGGCAGT-TCC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70750 96 + 192460366 AACAACAGCCCAGCAAAGGCT-GT-----GGCTCC-AATATCTCCCCACGCTCCCTGCACTCCCCTTTCTAACTCCC--TTACTGAAGCAACTCGGGGCAGT-TCC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546548 96 + 19675229 AACAACAGCCCAGCAAAGGCT-GT-----GGCTCC-AATATCTCCCCATGCTCCCTGCACTCCCCTTTCTAACTCCC--TTACTGAAGCAACTCGGGGCAGC-TCC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485616 96 + 16847902 AACAACAGCCCAGCAAAGGCT-GT-----GGCTCC-AATATCTCCCCACGCTCCCTGAACTCCCCTTTCCAACTCCC--TTACTGAAGCAACTCGGGGCAGC-TCC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419524 98 - 91754291 AACAACAGCCCAGCAAAGGCT-GT-----GGCTCC-AATATCTCACCAAGCTCCCTGCCCTCCCCTTTCTAACTCCCTTTTACTGAAGCAGCTTGGGGCATC-TCC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578205 96 - 1977891 AACAACAGCGCAGCAAAGGCT-GT-----GGCTCC-AACATCTCCCCACGCTCCCTGCACTCCCCTTTCCAACTCCC--TTACTGAAGCAACTCGGGGCAGC-TCC-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455393 97 + 7796314 AACAACAGCCCAGCAAAGGCT-GT-----GGCTCC-AATATCTCACCAAGATCCCTGCACTCCCCTTTCTAACTCCC--TTACTGAAGCAACTCGGGGCATCTTCC-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938485 88 - 74750902 AACAACAGCCCAGCAAAGGCC-GT-----GG----------TTCACCAAGCTCCCAG-ACTCCCCTTTCTAACTCCC--TTACTGAAACGACTCAGGGAATC-TCCCt i calJac3.chr17 C 0 I 138 s saiBol1.JH378146 462216 92 + 17725628 AACAATAGCCCAGCAAAGGCT-GTATGTGGT----------TCCCCCAAGCTCCCTG-AC-CCCGTTTCTAACTCCC--TTACTGAAATGACTCAGGGAATC-TCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426694 87 - 6778120 AACAACAGCCCAGCAACGGCT-GT-----GG----------CTCACCAGGCTCCC-G-ACTCCCCTCTCAAACTCCC--TTACTGAAACGACCCAGGGAATC-TCCCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417417 97 - 608964 AATAATGGCAGAGCAAACGAT-G------GTTCCA-GAAATTTCATCAAGCTCTCTGGTCTCTCCTTTCTGACTCCC--CCACTGAAACCACTCTGGGAATC-TCCCT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3894399 98 + 6579706 AATAACGACACAGGAAATGTTAGT-----GGTTCCAAAAATCTCATCAAGTTTCATG--GTCTTTTTTTTTACTCCT--TCGTGAAACTGATTCTGGAAAGC-TCCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419297 122 + 22200726 I e micMur3.chr1 25904329 244 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=38767.000000 s hg38.chr3_KI270779v1_alt 126163 23 + 205312 AAAATGGAATC-CTCTAACACTTG s panTro5.chr3 200115239 23 + 202621043 AAAATGGAATC-CTCTAACACTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90414 23 + 190779 AAAATGGAATC-CTCTAACACTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55006 23 + 106623 AAAATGGAATC-CTCTAACACTTG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872917 23 + 123690457 AAAATGGAACC-TTCTAACACTTG i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 462308 22 + 17725628 -AAAGTGGAAC-CTCTAACACGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426781 22 - 6778120 -AAAATGGAAT-CTCTAACACGTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417514 23 - 608964 AAGATGGAAAC-TTCCAGTACTTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3894497 24 + 6579706 CAAATGTAGCCTCCCCAGTACTTA i dasNov3.JH569502 C 0 I 5 e proCoq1.NW_012133858v1 7419297 122 + 22200726 I e micMur3.chr1 25904329 244 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I e macNem1.NW_012014355v1 546644 0 + 19675229 C e calJac3.chr17 938573 138 - 74750902 I e colAng1.NW_012118932v1 455490 0 + 7796314 C e manLeu1.NW_012102020v1 578301 0 - 1977891 C e chlSab2.chr15 419622 0 - 91754291 C e cerAty1.NW_012004056v1 485712 0 + 16847902 C e macFas5.chr2 70846 0 + 192460366 C e rheMac8.chr2 202463616 0 + 204787373 C a score=23976.000000 s hg38.chr3_KI270779v1_alt 126186 7 + 205312 CTACTCC s panTro5.chr3 200115262 7 + 202621043 CTACTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90437 7 + 190779 CTACTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55029 7 + 106623 CTACTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872940 7 + 123690457 CTACTCC i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 462330 7 + 17725628 CTACTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426803 7 - 6778120 CTACTCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417537 7 - 608964 GTACTCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29069334 7 + 31377067 CTACTTC i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 3894526 7 + 6579706 CTAATCT i dasNov3.JH569502 I 5 C 0 e proCoq1.NW_012133858v1 7419297 122 + 22200726 I e micMur3.chr1 25904329 244 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e macNem1.NW_012014355v1 546644 0 + 19675229 C e calJac3.chr17 938573 138 - 74750902 I e colAng1.NW_012118932v1 455490 0 + 7796314 C e manLeu1.NW_012102020v1 578301 0 - 1977891 C e chlSab2.chr15 419622 0 - 91754291 C e cerAty1.NW_012004056v1 485712 0 + 16847902 C e macFas5.chr2 70846 0 + 192460366 C e rheMac8.chr2 202463616 0 + 204787373 C a score=527970.000000 s hg38.chr3_KI270779v1_alt 126193 85 + 205312 CAAGAGTGGATA-TTTGGGGATCTGTGGAATAGTATATTGATTTCAA--TC--TCTTTTTCCCATTGTGTATTTTATGCTTTTCTACCCC s panTro5.chr3 200115269 85 + 202621043 CAAGAGTGGATA-TTTGGGGATCTATGGAATAGTATATTGATTTCAA--TC--TCTTTTTCCCATTGTGTATTTTATCCGTTTCTACCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90444 85 + 190779 CAAGAGTGGATA-TTTGGGGATCTATGGAATAGTATATTGATTTCAA--TC--TCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55036 85 + 106623 CGAGAGTGGATA-TTTGGGGATCTATGGAATAGTATATTGATTTCAA--TC--TCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120872947 87 + 123690457 CAAGAGTGCATA-TTTGGGGATCTATGGAATAGTATATTGATTTCAATCTC--TCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463616 60 + 204787373 --------------------------AGAATAGTAGATT--TTTTAA--TCTGTCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70846 60 + 192460366 --------------------------AGAATAGTAGATT--TTTTAA--TCTGTCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546644 62 + 19675229 --------------------------AGAATAGTAGATTGATTTTAA--TCTGTCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485712 62 + 16847902 --------------------------AGAATAGTAGATTGATTTTCA--TCTGTCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419622 62 - 91754291 --------------------------AGAATAGTAGATTGATCTTAA--TCTGTCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578301 62 - 1977891 --------------------------AGAATAGTAGATTGATTTTCA--TCTGTCTTTTTCCCATTGTGTATTTTATCCTTTTCTACCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455490 62 + 7796314 --------------------------AGAATAGCAGATTGATTTTAA--TCTGTCTTTTTCTCATTGTGTATTTTATCCTTTTCTACCCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462337 73 + 17725628 CAAGAGTGGCTA-TTTGGGGACATAGAGAATAGCATATGGATCTCAA--TCTCTCTTTTTCCCACTGTGTAGTTTA-------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426810 87 - 6778120 CAAGAGTGGCTA-TTTGGGGACACATAGAGTGGCACATCAATTTCAA--TCTCTCTTTTTCCCACTGTGTATTTTATCCTTCTCCACCCC i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7419419 87 + 22200726 CAAGAGTGGATA-TTTTGGGACATAGAGAATAGTATATTGATTTTAA--TCTCTGTTTTTCCCATTGTGTATTTCTTCCTTTTCTACCCC i proCoq1.NW_012133858v1 I 122 I 9 s otoGar3.GL873829 417544 82 - 608964 CAAGAGTGGATA-TACTGGGGCTT-----ATAGTGTATTTATTTTAA--TCTCTATTTTTCCCACTGTGTATTTCTGCTTTTTCCACTCT i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29069341 81 + 31377067 CAGGACTGGACA-TCTGGGGACACCTAAACTAATACATTGATGCCAA--TCTCTGTTTTTCCTCGTCTGTGTCTTGTCCCCTCT------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3894533 86 + 6579706 GAAGAATGGATATTTTTGGGACATCTAAAATAACATACTGATATTAA--CC--TGTTTGTCCCACTTTGTGCCTTTTCCTTTGCTGCCCC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25904329 244 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I a score=112954.000000 s hg38.chr3_KI270779v1_alt 126278 20 + 205312 CTACCCCACCAACCGTCCCT s panTro5.chr3 200115354 20 + 202621043 CTACCCCACCAACCATCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90529 20 + 190779 CTACCCCACCAACCATCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55121 20 + 106623 CTACCCCACCAACCGTCCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873034 20 + 123690457 CTACCCCACCAACCATCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463676 20 + 204787373 CCACCCCACCAACCATCACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70906 20 + 192460366 CCACCTCACCAACCATCACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546706 20 + 19675229 CCACCCCACCAACCATCACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485774 20 + 16847902 CCACCCCACCAACCATCACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419684 20 - 91754291 CCACCCCACCAACCATCACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578363 20 - 1977891 CCACCCCACCAACCATCACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455552 20 + 7796314 CCACCCCACCAACCATCACT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462410 16 + 17725628 ----CTCGCCAACCCTCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426897 20 - 6778120 TCAGCCCCCCAGCCCTCCTT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 417628 9 - 608964 GCGCTCCCC----------- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 29069422 18 + 31377067 CTGCCCCCGGGCTCCTCC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3894619 18 + 6579706 -CTGTCTGCCCACCCTCTC- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419506 9 + 22200726 I e micMur3.chr1 25904329 244 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I a score=1585171.000000 s hg38.chr3_KI270779v1_alt 126298 180 + 205312 ACCTCTATCCCTTTCGAGTACCCA---TTCTCTGCTCATGCTTCAGAAGGA---------tgtg--t------------------------------gtgtgtgtctgt-gtgtgcgtg--tgca----------------------tgcgtgtgtgtgt--aa-------------gtggtgAAGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCA s panTro5.chr3 200115374 182 + 202621043 ACCTCTATCCCTTTCAAGTACCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgtg--t------------------------------gtgtgtgtctgt-gtgtgcgtg--tgca----------------------tgcatgtgtgtgt--aa-------------gtggtgAAGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90549 182 + 190779 ACCTCTATCCCCTTCAAGTACCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgtg--t------------------------------gtgtgtgtgtgt-gtgtgtgtg--tgCA----------------------TGCATGTGTGTGT--AA-------------GTGGTGAAGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55141 180 + 106623 ACCTCTATCCCTTTCAAGTACCCA---TTCTCTGCTCATGCTTCAGAAGGA---------tgtg--t------------------------------gtgtgtgtctgt-gtgtgcgtg--tgca----------------------tgcgtgtgtgtgt--aa-------------gtggtgAAGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873054 184 + 123690457 ACCTCTATCCCTTTCAAGTACCCA---TTCTCTGCTCATGTTTCAGAAGGAtg-------tgtgtct------------------------------gtgtgtgtgtgt-gtctgtgtg--tgtg----------------------tgtgtgtgtgtgt--AA-------------GTGGTGAGGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCctttctggctcttcttttacaaccaaaaataaaaa------------taaaaaagca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463696 187 + 204787373 ACCTCTATCCCTTTCAAGTCCCCA---TTCTCTGCTCATGCTTCAGAAGGatg-------tgta--t------------------------------gtgtatgtgtct-gtgtgcgtg--tgca------------tgtgtgtgtgcgtgtgtgtgtgt--aA-------------AGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----ctttctggctcttcctttacaaccaaaaataaaaa------------ttaaaaagca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 70926 189 + 192460366 ACCTCTATCCCTTTCAAGTCCCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgta--t------------------------------gtgtatgtgtct-gtgtgtgtg--tgca----------tgtgtgtgtgcatgtgtgtgtgtgt--AA-------------AGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----ctttctggctcttcctttacaaccaaaaataaaaa------------ttaaaaagca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546726 199 + 19675229 ACCTCTATCCCTTTCAAGTCCCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgta--t------------------------------gtgtatgtgtct-gtgtgtgtg--tgcatgtgtgcatgtgtgtgtgcgtgtgtgtgtgtgtgt--AA-------------AGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----CTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TTAAAAAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485794 195 + 16847902 ACCTCTACCCCTTTCAAGTCCCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgta--t------------------------------gtgtatgtg--t-gtgtgtgtg--tgcatgtgtgca--tgtgtgtgtgcgtgtgtgtgtgtgt--AA-------------AGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----ctttctggctcttcctttacaaccaaaaataaaaa------------ttaaaaagca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419704 233 - 91754291 ACCTCTATCCCTTTCAAGTTCCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgta--tgtgtctgtgtgtgcacgtgtgtgcgtgtgcgtgtatgtgcat-gtgtgtgtgcatgtgtgtgtgcgtgtgtgcgtgtgtgcgtgtgtgtgtgtgCAA-------------GGGGTGAAGGAAGCAGTTTTGTGTTGCCCGATAAACA-----CTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TTAAAAAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578383 201 - 1977891 ACCTCTATCCCTTTCAAGTTCCCA---TTCTCTGCTCATGCTTCAGAGGGAtg-------tgta--t------------------------------gtgtatgtgtct-gtgtgtgtgtgtgcatgtgtgcatgtgtgtgtgtgtgcgtgtgtgtgtgt--AA-------------AGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----CTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TTAAAAAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455572 187 + 7796314 ACCTCTATCCCTTTCAAGTCCCCA---TTCTCTGCTCATGCTTCAGAAGGAtg-------tgta--t------------------------------gtgtctgtgtgt-gcatgtgtg--tgca------------tgtgtgtgtgtgtgtgtgtgtgt--AA-------------GGGGTGAAGGAGGTAGTTTTGTGTTGCCAGATAAACA-----ctttctggctcttcctttacaaccaaaactaaaaa------------ttaaaaagca i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462426 160 + 17725628 GCCTCTATCCCTTTCAAGTGCTCA---TTCTCTGCTCATGCTTCAGAAGGG---------GGTA--G------------------------------G--------------------G--TGTG----------------------TGTGTGTGTGTGT--AA-------------GGGGTGAAGGAGGTGG-CTTGTGTTGCCAGATAAACACTTTCctttctggctctttctttacaaccaaaaacaaaaa------------taaaaacgca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 426917 173 - 6778120 ACCTCCATCCCTTTCAAGTGCTCA---TTCTCTGCTCATGCTTCAGAAGGG---------GGTA--G------------------------------GGgtg------t-gtgtgtgtg--tgtg----------------------tgtgtgtgtgtgt--AA-------------GGGGTGAAGGAGGTGG-TTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTTCTTTACAACCAAAAAGAAAAA------------TGAAAAAGCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25904573 190 - 114275543 ACCTCTGTCCCTTTCAAGTACCAA---TTCCCTGCTCATGCTTCAGGAGAAGGgtgtatgtgtg--t------------------------------gtgtgtgtgttt-gtgtgtgtg--tgCC----------------------------TGTGTGT--AAGTGCCCATGTTGGGGGGCAAAGGAGGGGGTTGTGTGTTGCCAGACAAACACTTTCCGTTTTGGCTCCTCCTTTACAACCAAAAAA------------------TAAAAAGCA i micMur3.chr1 I 244 C 0 s proCoq1.NW_012133858v1 7419515 159 + 22200726 ACCTCTGTCCTCTTCAAGTACCAA---TTCTCTGCTCACGCTTCAGAAGG-----------------------------------------------gtgtgtgtgtgt-gtatgtacg--tgcc-----------------------------gtgtgt-----------------gGGGCGAAGGAGGGGGTTGGGTGTTGCCAGACAAACACTTTCCTTTCTGGCTCCTCCTTTACAATCAAAAAA------------------TAAAAAGCA i proCoq1.NW_012133858v1 I 9 C 0 s otoGar3.GL873829 417637 171 - 608964 ACCTCTGTCCCCTTCAAATAACAA---TTCTCTGCTCATGCTTTAGGAGAGGG--------------------------------------------GTGTGTATGCAG-GTGTGTGAG--TGCC----------------------------TGTATGC--AGGGACG--------GGGACGGGGAGTAGGGCTAGAGGTTGCCAGACAAACACTTTCCTTTCTGGCTCCCCCTTTACAGCCAAAAAA-----------------CCAAAAAACA i otoGar3.GL873829 C 0 I 515 s canFam3.chr33 29069440 164 + 31377067 ACCTCTACCCCTTCCCGGTGGGAA---TGCTC-GATCGTGCTTCCCGAGAA---------------G------------------------------G--------------------G--CGCC--------------------------TGTAGGTGT--AA-------------GGAGCGAGCGGGGCGGTGGGGTATCGCCAGCCAAACACTCCCCTTTATGGCTCCTGCTTTACAACCCAAACAAAACAAAACAAAGTTTTTAAAAAAGCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3894637 174 + 6579706 AAGTCCACCCCTTTTAAGTAGTAATTTTTTTCTGTTCATGCTTCAGGGAAAGGG------TGTA--T------------------------------GTGTGTGTATGTCACATGCATG--AATG----------------------TGTGAGTGTATAT--AA-------------GGAGTGGAGGA--TGGTTGAGTGTTGCCAGCCAAACACTTTCCTTCCTGGCTCCCCCTTTACAGCCAAAATGAGCA----------------------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I a score=1066135.000000 s hg38.chr3_KI270779v1_alt 126478 102 + 205312 GATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtagtttctccaaactgga--aa-agatgtttcttttagctggaaggaga s panTro5.chr3 200115556 102 + 202621043 GATAGGGCAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtagtttctccaaactgga--aa-agatgtttcttttagctggaaggaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90731 102 + 190779 GATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtagtttctccaaactgga--aa-agatgtttcttttagctggaaggaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55321 102 + 106623 GATAGGTCAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtagtttctccaaactgga--aa-agatgtttcttttagctggaaggaga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873238 102 + 123690457 gataggacaagagttgtggaattaggccaag-tatcttggctagaa---ac----atgcagaagtaatttctccaaactgga--aa-agatgtttcttttagctggaaggaga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463883 102 + 204787373 cataggacaagagttgtggaattaggccaaa-tatcttggctagaa---ac----atggagaagtaatttctccaaactgaa--aa-agatgtttcttttagccagagggaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71115 102 + 192460366 cataggacaagagttgtggaattaggccaaa-tatcttggctagaa---ac----atggagaagtaatttctccaaactgga--aa-agatgtttcttttagccagagggaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 546925 102 + 19675229 GATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtaatttctccaaactgaa--aa-agatgtttcttttagccagagggaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 485989 102 + 16847902 gataggacaagagtcgtggaattaagccaag-tatcttggctagac---ac----atggagaagtaatttctccaaactgaa--aa-agatgtttcttttagccagagggaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 419937 102 - 91754291 GATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtaatttctccaaactgaa--aa-agatgtttcttttagccagagggaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578584 102 - 1977891 GATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---ac----atggagaagtaatttctccaaactgaa--aa-agatgtttcttttagccagagggaga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455759 102 + 7796314 gataggacaagagtcgtggaattaggctaag-tatcttggctagaa---ac----atgcagaagtagtttctccaaactgga--aa-agatgtttcttttagttggagggaga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462586 102 + 17725628 gataggacaagagttgcggaatgaggccaag-tatcttggctggaa---ac----atggaaaagtaatgtctccaaactgga--aa-agatgtttcttttagctgaaaggaga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 427090 102 - 6778120 GACAGGACAAGAGTTGTGGAATGAGGCCGAG-GATCTTGGCTAGAA---AC----ATGGAAAAGTCATGTCTCCAAACTGGA--AA-AGATGTTTCTTTTAGCTGGAAGGAGA i cebCap1.NW_016107444v1 C 0 I 843 s micMur3.chr1 25904763 106 - 114275543 GACAGGACAAGAGTCATGGATTTAGGCCaag-tattttggct-gaa---actggaatgcagaagcaacttctccaaactgaa--aagagatgttacttttagctggagggaga i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7419674 105 + 22200726 GATGGGACAAGAGTCATGGATTTAGG-Caag-tatcttggct-gaa---acttgaatgcagaagcaacttctccaaactgaa--aagagatgttacttttagctggagggaga i proCoq1.NW_012133858v1 C 0 C 0 s canFam3.chr33 29069604 105 + 31377067 AATGGGGCAGGATGGATAGACTAAGGCCAAACTGTCGTGGTTAGAACCGGC----ATGCACCAAGATAGtctctaaaatg-a--aa-agatccttcttttagctggaaggaga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3894811 99 + 6579706 ---------GGGGGGGGGGGGGGCGGGCAAG-TGACTTGGTTAGAA---ACTCAAATGGAGAAGAATTTCCTCTAAATAGAAACAG-AGATGCCACTTTTAGCTGGAGGGAAA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I a score=396438.000000 s hg38.chr3_KI270779v1_alt 126580 43 + 205312 tagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- s panTro5.chr3 200115658 43 + 202621043 tagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90833 43 + 190779 tagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55423 43 + 106623 cagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873340 43 + 123690457 tagtaaaggag-aaagcaaaggggctt-ggaggtgtcaagataga- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202463985 43 + 204787373 gagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71217 43 + 192460366 gagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547027 43 + 19675229 gagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486091 43 + 16847902 gagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420039 43 - 91754291 gagtaaaagag-aaagcaaaggggctc-ggaggtgtcaagatagg- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578686 43 - 1977891 gagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455861 43 + 7796314 tagtaaaagag-aaagcaaaggggctt-ggaggtgtcaagataga- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462688 43 + 17725628 gagtgaaagaa-aaagcaaaggggctt-ggagctgccaggagaga- i saiBol1.JH378146 C 0 I 1 s micMur3.chr1 25904869 42 - 114275543 gggtaaaagag-aaaataaaggggttt--ggggtgtcaagataaa- i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7419779 44 + 22200726 gagtaacagag-aaaataaaggggttttgggggtgtcaagataga- i proCoq1.NW_012133858v1 C 0 I 10 s canFam3.chr33 29069709 44 + 31377067 cagtagaagagaaaaacgaaggggtgt-aggggcgtcaacatcat- i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3894910 43 + 6579706 -GAGGAAAGAC-AGGATAAAGGAGCCT-TGGGGTCCCAAGCTCAGA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=131501.000000 s hg38.chr3_KI270779v1_alt 126623 17 + 205312 -gggacccgcagctctct s panTro5.chr3 200115701 17 + 202621043 -ggcacccgcagctcttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90876 17 + 190779 -ggcacccgcagctctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55466 17 + 106623 -gggacccgcagctctct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873383 17 + 123690457 -gggacccacagctctct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464028 17 + 204787373 -gcgaccagcagctctct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71260 17 + 192460366 -gcgaccagcagctctct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547070 17 + 19675229 -gcgaccagcagctctct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486134 17 + 16847902 -gcgaccagcagctctct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420082 17 - 91754291 -gccaccagcagctctct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578729 17 - 1977891 -gcgaccagcagctctct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455904 17 + 7796314 -gcgaccagcagctctct i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462732 17 + 17725628 -gggacccgcagctctct i saiBol1.JH378146 I 1 C 0 s micMur3.chr1 25904912 17 - 114275543 -gggacctgcacctctct i micMur3.chr1 I 1 C 0 s canFam3.chr33 29069755 17 + 31377067 -gggacctacacccctct i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3894953 18 + 6579706 GGGGCCCTGCACATCTTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419823 10 + 22200726 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=211825.000000 s hg38.chr3_KI270779v1_alt 126640 20 + 205312 tcccagcaccgtgatgatga s panTro5.chr3 200115718 20 + 202621043 tcccagcaccgtgatgatga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90893 20 + 190779 tcccagcaccgtgatgatga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55483 20 + 106623 tcccagcaccgtgatgatga i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873400 17 + 123690457 ccccagcaccg---tgatgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464045 20 + 204787373 tcccagcaccgtgatgatga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71277 20 + 192460366 tcccagcaccgtgatgatga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547087 20 + 19675229 tcccagcaccgtgatgatga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486151 20 + 16847902 tcccagcaccgtgatgatga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420099 20 - 91754291 tcccagcaccgtgatgatga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578746 20 - 1977891 tcccagcaccgtgatgatga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455921 20 + 7796314 tcccagcaccgtgatgatga i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462749 20 + 17725628 ccccagcaccgcgatgatgg i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25904929 20 - 114275543 tcccaacaccgtgatgatga i micMur3.chr1 C 0 I 501 s proCoq1.NW_012133858v1 7419833 20 + 22200726 tcccaacaccgtgatgatga i proCoq1.NW_012133858v1 I 10 C 0 s canFam3.chr33 29069772 20 + 31377067 tcccaacgccacaacgagga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3894971 20 + 6579706 TTCTGACACCATGATGATGA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=908797.000000 s hg38.chr3_KI270779v1_alt 126660 110 + 205312 catcctagggagaaatgactgtggggtgcttctaggcagacaggactgtaagcggcc--tcagaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctcc s panTro5.chr3 200115738 109 + 202621043 catcctagggagaaatggctgt-gggtgcttctaggcagacgggactgtaagcggcc--tcagaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 90913 109 + 190779 catcctagggagaaatggctgt-gggtgcttctaggcagacgggactgtaagcggcc--tcagaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55503 109 + 106623 catcctagggagaaatggctgtggggtgcttctaggcagacgggactgtaagcggcc--tcagaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctct-c i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873417 110 + 123690457 catcccagggagaaacggctgtggggtgcttctaggcagacgggactgtaagcggcc--tcagaaaaggtgtcctttgtctgagcaaggcacagaagcagcagagcctctcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464065 110 + 204787373 catcctagggagaaatggctgtggggtgcttctaggcagacaggaccataagcggcc--tcgtaaaaggtgtcctatgtctgagcaaggcacagaagcagcagagcctctcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71297 110 + 192460366 catcctagggagaaatggctgtggggtgcttctaggcagacaggaccgtaagtggcc--tcgtaaaaggtgtcctatgtctgagcaaggcacagaagcagcagagcctctcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547107 110 + 19675229 catcctagggagaaatggctgtggggtgcttctaggcagacaggaccataagcggcc--tcgtaaaaggtgtcctatgtctgagcaaggcacagaagcagcagagcctctcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486171 110 + 16847902 catcctagggagaaatggctgtggggtgcttctaggcagccaggaccgtaagcggcc--tcgtaaaaggtgtcctatgtctgagcaaggcacagaagcagcagagcctctcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420119 110 - 91754291 catcctagggagaaatggctgtggggtgcttctaggcagacaggaccgtaagcggcc--tcgtaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578766 110 - 1977891 catcctagggagaaatggctgtagggtgcttctaggcagacaggaccataagcggcc--tcgtaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 455941 110 + 7796314 catcctaggcagaaatggctgtggggtgcttctaggcagacaggaccgtaagcagcc--ttgtaaaaggtgtcctgtgtctgagtaaggcacagaagcagcagagcctctcc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462769 107 + 17725628 tatcc-agggagaaatg-ctgtgaggggcttctaggcagacgggaccacgagcggcc--tcgtaaatggtttcctgtgtctgagcaaggcgcagaag-ggcaaagcatctcc i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7419853 109 + 22200726 gaccccagagagaaatggctctgtggtgcctgtaggcag-tgggaccacaagtagcc--tcacgaaaggtttcctgggtctgagcaaggcacagaagcagcagggcctctcc i proCoq1.NW_012133858v1 C 0 I 378 s canFam3.chr33 29069792 109 + 31377067 gagcccagagagaaataggcgtgtggtgcttgtaggcagacgcagcc-tagggcgcc--ttataaaaggtgccccgtgtctgagcaaagcaccgaagccatggagcacctcc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3894991 87 + 6579706 ------------------------GAACATtctaggcagataggactg-aattagccttttataaaaggttgcctgtgtctgagtaaggccaagaagcgacagagagactcc i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=659847.000000 s hg38.chr3_KI270779v1_alt 126770 90 + 205312 ctgggtctgaaggggaagtg------gggcggag-c-tgtgatggaaacctgtgtggactcacgcccaggga-cccacaaccaccttcc-accccacacc s panTro5.chr3 200115847 90 + 202621043 ctgggtctgaaggggaagtg------gggcggag-c-tgtgatggaaacctgtgtggactcacgcccaggga-cccacgaccaccttcc-accccacacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91022 90 + 190779 ctgggtctgaaggggaagtg------gggcggac-c-tgtgatggaaacctgtgtggactcacgcccaggga-cccacgaccaccttcc-accccacacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55612 90 + 106623 ctcggtctgaaggggaagtg------gggcggag-c-tgtgatggaaacctgtgtggactcacacccaggga-cccacgaccaccttcc-accccacacc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873527 90 + 123690457 ctgggtctg-aggggaagtg------gggcagag-c-tgtgatggaaacctgtgtggactcaggcccagggaccccatgaccaccttcc-gccccacacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464175 91 + 204787373 ctgggtctgaaggggaagtg------gggcagag-c-tgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttcc-accccacacc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71407 91 + 192460366 ctgggtctgaaggggaagtg------gggcagag-c-tgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttcc-accccacacc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547217 91 + 19675229 ctgggtctgaaggggaagtg------gggcagag-c-tgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttcc-accccacacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486281 91 + 16847902 ctgggtctgaaggggaagtg------gggcagag-c-tgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttct-accccacacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420229 91 - 91754291 ctgggtctgaagggaaagtg------gggcagag-c-tgcgatgggaacctgtgtggactcatgcccagggaccccacgaccaccttcc-accccacacc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578876 91 - 1977891 ctgggtctgaagctgaagtg------gggcagag-c-tgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttcc-accccacacc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456051 91 + 7796314 ctgggtctgaaggggaagtg------gggcagag-c-tgtgaaggaaacctgtgtggactcatgcccagggaccccatgaccaccttcc-accccacacc i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462876 95 + 17725628 ctgggtctgaaggggagacggagggagggcagag-c-tgtgatggaaacct-tgtggactcatgcccaggga-cccatgcccacctccc-acctcacacc i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29069901 84 + 31377067 ctgggcctgaagaggaggga------gcacggcgcc-tgtgag------ctgtgtaggcacgtgcccagggaccacagga--ggcctcc-ctcccccACC i canFam3.chr33 C 0 I 85 s dasNov3.JH569502 3895078 92 + 6579706 ctaggcctgaaggctggg-a------ggacagag-caggtggtagaaacctgggtagactcatgcccagggaccactggggcaccttcctgcctgatacc i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=625654.000000 s hg38.chr3_KI270779v1_alt 126860 88 + 205312 gcagggccctctgctgggcttcgc-cgcagagctgtg----------------gggcgctgtgagaaagacggaggtggaagtttcctgccaacctggcagaagg s panTro5.chr3 200115937 88 + 202621043 gcagggccctctgctgggcttcgc-cgcagagctgtg----------------gggcgctgtgagaaagacggaggtggaagtttcctgccaacctggcagaagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91112 88 + 190779 gcagggccctctgctgggcttcgc-cgcagagctgtg----------------gggcgctgtgagaaagacggaggtggaagtttcctgccaacctggcagaagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55702 88 + 106623 gcagggccctctgctgggcttcgc-cgcagagctatg----------------gggcgctgtgagaaagacggaggtggaagtttcctgccaacctggcagaagg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873617 103 + 123690457 gcagggccctctgctgggctttgc-cgcagagctgtggaactgggaaccact-gggcactgtgagaaagactgaggtggaagtttcctgccaacctggcagaagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464266 102 + 204787373 gcagggccctctgctgagctttgc-cacagagctgtggaactggaaaccatt-gggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71498 102 + 192460366 gcagggccctctgctgagctttgc-cacagagctgtggaactggaaaccatt-gggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547308 102 + 19675229 gcagggccctctgctgagctttgc-cacagagctgtggaactggaaaccatt-gggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486372 102 + 16847902 gcagggccctctgctgagctttgc-cacagagctgtggaactgggaaccact-gggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420320 102 - 91754291 gcagggccctctgctgagctttgc-cacagagctgtggaactgggaaccact-gggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 578967 102 - 1977891 gcagggccctctgctgagctttgc-cacagagctgtggaactgggaaccatt-gggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456142 102 + 7796314 gcagggccctctgctgagctttgc-cacagagctgtggaactgggaaccact-gggcactgtgagaaagactgaggtggaagcctcctgccaacctggcag-agg i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 462971 103 + 17725628 tcagggcgctctgctgggcttggc-cgcagaactgtggaactgggaaccact-gggcactgtgagaaagatggaggtggaagtttcctgccaacctagcagaatg i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3895170 91 + 6579706 ------------tcaatgttttgcacataaaac--tggaactgggaatcgctggggaactctaagagaggctgaggtagaagtttcctgccagcccaacccaatg i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069985 85 + 31377067 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=243289.000000 s hg38.chr3_KI270779v1_alt 126948 43 + 205312 ggaggtgggagataaaaatccagttgaact---------ataagcaataaag s panTro5.chr3 200116025 43 + 202621043 ggaggtgggagataaaaatccagttgaact---------ataagcaataaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91200 43 + 190779 ggaggtgagagataaaaatccagttgaact---------ataagcaataaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55790 43 + 106623 ggaggtgggagataaaaatccagttgaact---------ataaggaataaag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873720 40 + 123690457 ggaggtgggagataaaaatccagttgaact---------ataagcaata--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464368 40 + 204787373 ggaggtgggagagaaaagtccagttgaact---------ataagcgatc--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71600 40 + 192460366 ggaggtgggagagaaaagtccggttgaact---------ataagcaatc--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547410 40 + 19675229 ggaggtgggagagaaaagtccagttgaact---------ataagcaatc--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486474 40 + 16847902 ggaagtgggagagaaaagtccggttgaact---------ataagcaatc--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420422 40 - 91754291 ggaggggggagagaaaagtccggttgaact---------gtaagcaatc--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579069 40 - 1977891 ggaggtgggagagaaaagtccagttgaact---------ataagcaatc--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456244 40 + 7796314 ggaggtgggagagaaaaatccggttgaact---------ataagcaatc--- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 463074 43 + 17725628 ggaggtgggagataaacattcagttcaact---------atgagcaataaag i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29070070 52 + 31377067 agggtcgtgagctggagcccccattgggcTTGCtgctcagtgaggagtctgt i canFam3.chr33 I 85 C 0 s dasNov3.JH569502 3895261 43 + 6579706 ggaacttggagataaaaatttggttgagct---------agacacaaggaag i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=27550.000000 s hg38.chr3_KI270779v1_alt 126991 6 + 205312 taagGt s panTro5.chr3 200116068 6 + 202621043 aaagGt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91243 6 + 190779 aaaggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55833 6 + 106623 aaagGt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873760 5 + 123690457 -aagGt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464408 5 + 204787373 -aagtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71640 5 + 192460366 -aagtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547450 5 + 19675229 -aagtt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486514 5 + 16847902 -aagtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420462 5 - 91754291 -aagtt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579109 5 - 1977891 -aagtt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456284 5 + 7796314 -aagtt i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 463117 6 + 17725628 aaagat i saiBol1.JH378146 C 0 I 301 s canFam3.chr33 29070122 6 + 31377067 tgagat i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I a score=94754.000000 s hg38.chr3_KI270779v1_alt 126997 37 + 205312 tctt------------t--------cctctttccttccttccttcctttttc----------tttct--- s panTro5.chr3 200116074 37 + 202621043 tctt------------t--------cctctttccttccttccttcctgtttc----------tttct--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91249 37 + 190779 tctt------------t--------cctctttccttccttccttcctgtttc----------tttct--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55839 33 + 106623 tctt------------t--------cctctttccttccttcctt----tttc----------tttct--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873765 30 + 123690457 tctt------------t--------cctctttccttccttcctt-------c----------tttct--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464413 47 + 204787373 tctttctttctctttct--------tttcttttctttctctcttcctttttc------------tct--- i rheMac8.chr2 C 0 I 42 s macFas5.chr2 71645 49 + 192460366 tctttctctttctttct--------tttcttttctttctctcttcctttttc----------tttct--- i macFas5.chr2 C 0 I 46 s macNem1.NW_012014355v1 547455 47 + 19675229 tctttctttctctttct--------tttcttttctttctctcttcctttttc------------tct--- i macNem1.NW_012014355v1 C 0 I 42 s cerAty1.NW_012004056v1 486519 67 + 16847902 tctttctttctctttctttcttttcttttctttctttctctcttcctttttctttatctttctttct--- i cerAty1.NW_012004056v1 C 0 I 34 s chlSab2.chr15 420467 30 - 91754291 tctttctttctctttct--------ttcttttcttttc-------------------------------- i chlSab2.chr15 C 0 I 4 s manLeu1.NW_012102020v1 579114 49 - 1977891 tctttctctttctttct--------tttcttttctttctctcttcctttttc----------tttct--- i manLeu1.NW_012102020v1 C 0 I 46 s colAng1.NW_012118932v1 456289 44 + 7796314 tctttctttct-----t--------ttttctttctttctctcttcctttttc----------tttct--- i colAng1.NW_012118932v1 C 0 I 121 s canFam3.chr33 29070128 35 + 31377067 -------------------------tctttccccctcctctgttcctccccc----------tgcttgtg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I a score=69390.000000 s hg38.chr3_KI270779v1_alt 127034 19 + 205312 ttcgtccttctttttctcc s panTro5.chr3 200116111 19 + 202621043 ttcgtccttctttttctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91286 19 + 190779 ttcgtccttctttttctcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55872 19 + 106623 ttcatccttctttttctcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873795 12 + 123690457 -------tcctttttctcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464502 19 + 204787373 ttcttctttctttttctcc i rheMac8.chr2 I 42 C 0 s macFas5.chr2 71740 19 + 192460366 ttcttctttctttttctcc i macFas5.chr2 I 46 C 0 s macNem1.NW_012014355v1 547544 19 + 19675229 ttcttctttctttttctcc i macNem1.NW_012014355v1 I 42 C 0 s cerAty1.NW_012004056v1 486620 19 + 16847902 ttctttcttctttttctcc i cerAty1.NW_012004056v1 I 34 C 0 s chlSab2.chr15 420501 19 - 91754291 cttttctttctttctctct i chlSab2.chr15 I 4 I 40 s manLeu1.NW_012102020v1 579209 19 - 1977891 ttcttctttctttttctcc i manLeu1.NW_012102020v1 I 46 C 0 s canFam3.chr33 29070163 19 + 31377067 cacgcaccccctcGACACG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I e colAng1.NW_012118932v1 456333 121 + 7796314 I a score=7839.000000 s hg38.chr3_KI270779v1_alt 127053 14 + 205312 aata------------------------------------tagtttcttt s panTro5.chr3 200116130 48 + 202621043 aatattttc--tttctttctttctttctttctttctttctttctttcttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91305 18 + 190779 aatatagt--------------------------------ttctttcttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55891 14 + 106623 aata------------------------------------tagtttcttt i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873807 38 + 123690457 aataaagttagtttctttctttcattca------------ttcattcttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464521 14 + 204787373 aata------------------------------------aagtttcttt i rheMac8.chr2 C 0 I 30 s macFas5.chr2 71759 14 + 192460366 aata------------------------------------aagtttcttt i macFas5.chr2 C 0 I 28 s macNem1.NW_012014355v1 547563 14 + 19675229 aata------------------------------------aagtttcttt i macNem1.NW_012014355v1 C 0 I 26 s cerAty1.NW_012004056v1 486639 14 + 16847902 aata------------------------------------aagtttcttt i cerAty1.NW_012004056v1 C 0 I 34 s manLeu1.NW_012102020v1 579228 14 - 1977891 aata------------------------------------aagtttcttt i manLeu1.NW_012102020v1 C 0 I 26 s canFam3.chr33 29070182 14 + 31377067 ------------------------------------CGTGCACCCTCTCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I e colAng1.NW_012118932v1 456333 121 + 7796314 I e chlSab2.chr15 420520 40 - 91754291 I a score=40217.000000 s hg38.chr3_KI270779v1_alt 127067 17 + 205312 ctttct----------------------ttctttttctc s panTro5.chr3 200116178 17 + 202621043 ctttct----------------------ttctttttctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91323 17 + 190779 ctttct----------------------ttctttttctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55905 14 + 106623 ctttct-------------------------tttttctc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873845 17 + 123690457 ctttct----------------------ctctttttctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464565 27 + 204787373 ctttctttctctttcc------------ttccttccttc i rheMac8.chr2 I 30 C 0 s macFas5.chr2 71801 28 + 192460366 ctttctctttatttctt-----------ttctttctttc i macFas5.chr2 I 28 C 0 s macNem1.NW_012014355v1 547603 39 + 19675229 ctttctctttccttccttccttccttccttccttccttc i macNem1.NW_012014355v1 I 26 C 0 s cerAty1.NW_012004056v1 486687 35 + 16847902 ctttctttctctttctttctttcc----ttccttccttc i cerAty1.NW_012004056v1 I 34 C 0 s chlSab2.chr15 420560 17 - 91754291 ctttct----------------------ttccttccttc i chlSab2.chr15 I 40 C 0 s manLeu1.NW_012102020v1 579268 17 - 1977891 tcccct----------------------ttctttctttc i manLeu1.NW_012102020v1 I 26 C 0 s canFam3.chr33 29070196 17 + 31377067 CCCTCT----------------------CTCTCTGTCTC i canFam3.chr33 C 0 I 107 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I e colAng1.NW_012118932v1 456333 121 + 7796314 I a score=103086.000000 s hg38.chr3_KI270779v1_alt 127084 55 + 205312 c-tttcccttt-ctttcctttcctttcttt-----cctttcctttctttccctccttctttc- s panTro5.chr3 200116195 55 + 202621043 c-tttcctttt-ctttcctttcctttcttt-----cctttcctttctttccctccttctttc- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91340 54 + 190779 c-tttcctttt-ctttcctttcctttcttt-----cctttcctttctttccctccttc-ttc- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55919 41 + 106623 c-tttcct---------------tttcttt-----cctttcctttctttccctccttctttc- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873862 41 + 123690457 c-tttcct---------------ttacttt-----tctttcctttccttttttcattccttc- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464592 57 + 204787373 c-ttccttccttccttctttctctttcttt-----cttttctttctgtctctcctttcctttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71829 57 + 192460366 t-ttctctctctttttttctttctttcttt-----tctttctgtctgtctctcctttcctttc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547642 57 + 19675229 c-ttccttccttccttctttctctttcttt-----cttttctttctgtctctcctttcctttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486722 58 + 16847902 ctttctttctttctttctctttctttcttt-----tctttctgtctgtctctcctttcctttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420577 61 - 91754291 t-ttctttctt-ctttctttctttctttctgtctgtctgtctgtctgtctctcttttcctttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579285 55 - 1977891 c-ttccttcct--tttctttctctttcttt-----tctttctgtctgtctctcctttcctttc i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e canFam3.chr33 29070213 107 + 31377067 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I e colAng1.NW_012118932v1 456333 121 + 7796314 I a score=1463557.000000 s hg38.chr3_KI270779v1_alt 127139 268 + 205312 tttcttttct---------tttcttttcttttcttttctttctttttgacatagagtctcactctgttgcccaggctggagtacaatggcgcaatcttggctcactgtaacctccacctcccgggtgcaagcgattttcctgccgcagcctcccgagtagctgggactacaggcgcctgccaccacgcccagctaatttttgtatttttagtagagat-ggggtttcaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcttgcc s panTro5.chr3 200116250 277 + 202621043 tttcttttcttttcttttctttcttttcttttcttttctttctttttgagatagagtctcactctgttgcccaggctggagtacaatggcgcaatctcggctcactgtaacctccacctcccgggtgcaagcgattttcctgccgcagcctcccgagtagctgggactacagacacctgccaccacgcccggctaatttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtcttgatctcctgaccttgtgatccgcttgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91394 274 + 190779 tttcttttct-ttcttttctttcttttcttt--cttttcttctttttgagatagagtctcactctgttgcccaggctggagtacaatggcgcaatctcggctcactgtaacctccacctcccgggtgcaagcgattttcctgccgcagcctcccgagtagctgggactacaggcacctgccaccacgcccggctaatttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccacttgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 55960 259 + 106623 tttcttttct---------ttttttttcttt----------ctttttgagatagagtcttactctgttgcccaggctggagtacaatggcgcaatcttggctcactgtaacctccacctcccgggtgcaagcaattttcctgccgcagcctcccgagtagctgggactacaggcacctgccaccacgcccagctaatttttgtatttttagtagagatgggggtttcaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcttgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120873903 253 + 123690457 tttctttcct--------------tttcttt----------ctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcccagctaatattggtatttttagtagagac-ggggtttcaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgccttcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464649 273 + 204787373 tttccttcct---tctttctttcctttcttt-tcattctttctctttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctctgcctctcgcgttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacacccggctgatttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcctgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 71886 273 + 192460366 tttccttcct---tctttctttcctttcttt-tcattctttctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctccgcctcccgcgttcaagcgattctcctgcctcagcctcccaagtagctgggacaacaggcgcccgccaccacacctggctgatttttgtatttttagtagagat-ggggttccaccatgttggtcaggctggtctcgatctcctgaccttgtgatccgtctgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547699 273 + 19675229 tttccttcct---tctttcttttctttcttt-tcattctttctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctctgcctctcgcgttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacacccggctgatttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcctgcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 486780 273 + 16847902 tttccttcct---tctttctttcctttcttt-tcattctttctttttgagatggagtgtcactctgttgcccaggccggagtgcagtggtgcaatcttggctcactgtaacctccgcctcccgcgttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccacacccggctgatttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcctgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420638 273 - 91754291 tttccttcct---tctttctttcctttcttt-tcattctttctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactataacctccacctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggtgcccgccaccacgcccggctagtttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtcttgatctcctgaccttgtgatccgcctgcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579340 273 - 1977891 tttccttcct---tctttctttcctttcttt-tcattctttctttttgagatggagtctcactctgttgcccaggccggagtgcagtggcgcaatcttggctcactgtaacctccgcctcccgcattcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacacccagctgatttttgtatttttagtagagat-ggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcctgcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456454 273 + 7796314 tttctttcct---tctttctttcctttcttt-tcatgctttctttttgagatggagtttcactctgttgcccaggctggagtgcagtggcgcaatcttggctcaccgtaacctctgcctcccgggttcaggcgattctcctgcctcagcctcccaagtatctgggactacaggcgcctgccaccacacccagctgatttttgtatttttagtagagat-ggggttccactatgttggtcaggatggtctcgatctcctgaccttgttatccgcctgcc i colAng1.NW_012118932v1 I 121 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e canFam3.chr33 29070213 107 + 31377067 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I a score=268814.000000 s hg38.chr3_KI270779v1_alt 127407 47 + 205312 tcagcctccaaaagt----gct--gagattaaag---gcgtgagccactgcacccg s panTro5.chr3 200116527 47 + 202621043 tcagcctccaaaagt----gct--gagattaaag---gtgtgagccactgcacccg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91668 47 + 190779 tcagcctccaaaagt----gct--gagattaaag---gtgtgagccactgcacccg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56219 47 + 106623 tcagcctccaaaagt----gct--gagattaaag---gcgtgagccattgcacccg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874156 47 + 123690457 tcagcctccaaaagt----gct--gagattaaag---gcgtgagccactgcaccag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464922 47 + 204787373 tcagcctccaaaagt----gct--gggattaaag---gcatgagcccctgcacccg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72159 47 + 192460366 tcagcctccaaaagt----gct--gggattaaag---gcgtgagccactgcacccg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 547972 47 + 19675229 tcagcctcccaaagt----gct--gggattaaag---gcatgagcccctgcacccg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487053 47 + 16847902 tcagcctccaaaagt----gct--gtgattaaag---gcgtgagccactgcacccg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420911 47 - 91754291 tcagcctccaaaagt----gct--gtgattaaag---gcatgagccactgcaccca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579613 47 - 1977891 tcagcctccaaaagt----gct--gtgattaaag---gcgtgagccactgcacccg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456727 47 + 7796314 tcagccttcaaaagt----gct--gtgattaaag---gcatgagcccctgcacccg i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29070320 54 + 31377067 tcagcctggcagagtgggagctaggggattaaaattcggttgagcgat--aagccg i canFam3.chr33 I 107 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e otoGar3.GL873829 417808 515 - 608964 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I a score=14670.000000 s hg38.chr3_KI270779v1_alt 127454 3 + 205312 -gcc s panTro5.chr3 200116574 3 + 202621043 -gcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91715 3 + 190779 -gcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56266 3 + 106623 -gcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874203 3 + 123690457 -gcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464969 3 + 204787373 -gcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72206 3 + 192460366 -gcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548019 3 + 19675229 -gcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487100 3 + 16847902 -gcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420958 3 - 91754291 -gcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579660 3 - 1977891 -gcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456774 3 + 7796314 -gcc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 418323 3 - 608964 -gca i otoGar3.GL873829 I 515 C 0 s canFam3.chr33 29070374 3 + 31377067 tga- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I e calJac3.chr17 938573 138 - 74750902 I e saiBol1.JH378146 463123 301 + 17725628 I a score=38008.000000 s hg38.chr3_KI270779v1_alt 127457 4 + 205312 AGAA s panTro5.chr3 200116577 4 + 202621043 AGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91718 4 + 190779 AGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56269 4 + 106623 AGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874206 4 + 123690457 AGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464972 4 + 204787373 AGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72209 4 + 192460366 agaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548022 4 + 19675229 AGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487103 4 + 16847902 AGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420961 4 - 91754291 AGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579663 4 - 1977891 AGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456777 4 + 7796314 AGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938711 4 - 74750902 aaaa i calJac3.chr17 I 138 C 0 s saiBol1.JH378146 463424 4 + 17725628 aaaa i saiBol1.JH378146 I 301 C 0 s otoGar3.GL873829 418326 4 - 608964 agaa i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29070377 4 + 31377067 agac i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e dasNov3.JH569502 3895304 0 + 6579706 C e cebCap1.NW_016107444v1 427192 843 - 6778120 I a score=10424.000000 s hg38.chr3_KI270779v1_alt 127461 1 + 205312 A s panTro5.chr3 200116581 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91722 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56273 1 + 106623 A i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874210 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464976 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72213 1 + 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548026 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487107 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420965 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579667 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456781 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938715 1 - 74750902 a i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 463428 1 + 17725628 g i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 418330 1 - 608964 a i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29070381 1 + 31377067 a i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3895304 1 + 6579706 a i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I e cebCap1.NW_016107444v1 427192 843 - 6778120 I a score=220443.000000 s hg38.chr3_KI270779v1_alt 127462 21 + 205312 GTTCTCTTTCTT-CCCATGTGA s panTro5.chr3 200116582 21 + 202621043 GTTCTCTTTCTT-CCCATGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91723 21 + 190779 GTTCTCTTTCTT-CCCATGTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56274 21 + 106623 GTTCTCTTTCTT-CCCATGTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874211 21 + 123690457 GTTCTCTTTCTT-CCCACATGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464977 21 + 204787373 GTTCTCTTTCTT-CCCATGTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72214 21 + 192460366 gttctctttCTT-CCCATGTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548027 21 + 19675229 GTTCTCTTTCTT-CCCATGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487108 21 + 16847902 GTTCTCTTTCTT-CCCATGTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420966 21 - 91754291 GTTCTCTTTCTT-CCCATGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579668 21 - 1977891 GTTCTCTTTCTT-CCCATGTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456782 21 + 7796314 GTTCTCTTTCTT-CCCATGTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938716 21 - 74750902 GTTCTCTTTCTT-CCCAGGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 463429 21 + 17725628 attctctttctt-cccaggtga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428035 21 - 6778120 gttctctttctt-cccaggtga i cebCap1.NW_016107444v1 I 843 C 0 s otoGar3.GL873829 418331 17 - 608964 gttc---ttcct-caca-gcga i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29070382 22 + 31377067 gttctgtttcttacacatgtaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3895305 22 + 6579706 gttatatttttcacacacatga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I e mm10.chr16 65432248 468 - 98207768 I a score=1187355.000000 s hg38.chr3_KI270779v1_alt 127483 147 + 205312 GTTTGTGGCCTGAGACTGGAATCTGCTCTACTCACCTACCACTGCTCCACCCATCTCCCAACACAGACAC-ACCCAGG--ACAGGCAGAATCACAGCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAACTCC-TCCCCCACC--- s panTro5.chr3 200116603 147 + 202621043 GTTTGTGGCCTGAGACTGGAATCTGCTCTACTCACCTACCACTGCTCCACCCACCTCCCAAGACAGACAC-ACCCAGG--ACAGGCAGAATCACAGCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAACTCC-TCCCCCGCC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91744 147 + 190779 GTTTGTGGCCTGAGACTGGAATCTGCTCTACTCACCTACCACTGCTCCACCCACCTCCCAAGACAGACAC-ACCCAGG--ACAGGCAGAATCACAGCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAACTCC-TCCCCCGCC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56295 146 + 106623 GTTTGTGGCCTGAGACTGGAATCTGCTCTACTCACCTACCACTGCTCCACCCACCT-CCAATACAGACAC-ACCCAGG--ACAGGCAGAATCACAGCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAACTCC-TCCCCCACC--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874232 147 + 123690457 GTTTATGGCCTGAGACTGGAGTCTTCTCTACTCACCTACCACTGCTCCACCCACCTCCCAACACAGACAC-ACCCAGG--AGAGGCAGAATCACAGCATCCGTTCCACTCCCATTTCCTCTCCCCTCGGCACAGACACTCC-TCACCCGCC--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202464998 128 + 204787373 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACCAACAC-ACCCAGC--AGAGGCAGAATCACAGCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAACTCC-TCACCTGCC--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72235 128 + 192460366 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACCAACAC-ACCCAGC--AGAGGCAGAATCACAGCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAACTCC-TCACCTGCC--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548048 128 + 19675229 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACCAACAC-ACCCAGC--AGAGGCAGAATCACAGCATCTGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAACTCC-TCACCTGCC--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487129 128 + 16847902 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACCAACAC-ACCCAGC--AGAGGCAGAATCACAGCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAACTCC-TCACCTGCC--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 420987 128 - 91754291 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACAGACAC-ACCCAGG--AGAGGCAGAATCACAGCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAACTCC-TCACCTGCC--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579689 128 - 1977891 GTTTTTGACCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACCAACAC-ACCCAGC--AGAGGCAGAATCACAGCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAACTCC-TCACCTGCC--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456803 128 + 7796314 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACCTCCCAACACAGACAC-ACCCAGG--AGAGGCAGAATCACAGCATCCATTCCACTCCCATTTCCTCTCCCCTCAGCACAGAAACTCC-TCACCTGCC--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938737 147 - 74750902 GTTTATGACCTAAGACTGGTATCCGCTCCACTCATCTACCATAGCTCCACCCACCTCCCAACACAGACAC-GCCCAGG--AGAGGCAGAAACACGGCATCCCTTCAACTCCCATTTCCTCACCCCTTAGCACAGACACTAA-CCACCCTCC--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 463450 148 + 17725628 gtttatggcctaagacccgtatccactCTACGCATCTACCACAGCTCCAGCCACCTCCCAGCACAGACAT-GCCCAGG--AGAGGCGGAAACACAGCGTCCCTTCACCTCCCGTTTCCTCGCCCCTCAGCACAGAAGCTCCTCCGCCCTCC--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428056 124 - 6778120 gtttatggcctaagactggtatcCTCTCTACTCATCTGTCAGAGCTCCACCCACCTCCCAACACAGACAC-GCCCAGG--AGGGGCAGAAACACAGCAT-----------------------CCCTCAGTGCAGAAACTCCTCCA-CCTCC--- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 418348 139 - 608964 gcttgtggcctgagattgttatctgctCTACTGACCTACCATAGGTTCACCC-CTTCCCAACACAGACACTGCCTAGG--AGAGGCTGAGTCATAAC---CCTTCAATTCCCGTTCCCTTTCCCCTGGACACAGAAACTCA-TCCC-------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65432716 123 - 98207768 GTTTGTAGCCCAAGA-TGGCCCCTGCGCCACTTACCCACCACAGCTCCACCCTCCTCCCTAGATACACTT-TCCCCGGGAGAAAACACACACACAGCATCC-CTCCACT----TGCCCGCCTCCCCCAGC------------------------ i mm10.chr16 I 468 C 0 s canFam3.chr33 29070404 126 + 31377067 gttcatggcctgagattGAGGTTGACTGTCCTCCCCTGCCTTGGTTC----------CCAACACATACAA-TTCCCAC--CGAG-----------ACATCGCTTCCGTTCCCACTGCCTTTCCCCTCAACAAGGAAGTCTC-CCTCCCACC--- i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3895327 132 + 6579706 gattttggcctgagattggcat-------------------ctgctCTACTCACCTCCCAACATATACATTACCCAGG--AGAGGCTAAACTATACCATCCCTTTAATTCCCACTTCCTTTGCCCTGGATTTTGACCTTCC-CTTCCATGCTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7419962 378 + 22200726 I e micMur3.chr1 25904949 501 - 114275543 I a score=3855873.000000 s hg38.chr3_KI270779v1_alt 127630 251 + 205312 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGATTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAATGTTGAGAGCTGGGAGAC-------------------------TCCT----------------CGGCTCTGTGGTC s panTro5.chr3 200116750 275 + 202621043 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCCAGGGAAGATGAGAATGTTGAGAGCTGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CAGCTCTGTGGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 91891 275 + 190779 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAATGTTGAGAGCTGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CAGCTCTGTGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56441 251 + 106623 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACGGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAATGTCCCATTCTCTGCCCCGGGGAAGATGAGAATGTTGAGAGCTGGGAGAC-------------------------TCCT----------------CAGCTCTGTGGTC i gorGor5.CYUI01000576v1 C 0 I 3 s nomLeu3.chr11 120874379 274 + 123690457 TCCCAGCACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCACTGCAATGGCAGACCACGGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACGTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCGGGGGAAGATGAGAACGTTGAGAGCTGGGAGACTCCTCAGCTCTG-TGGTCTGACGCATCCT----------------CATCTA-ACACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465126 274 + 204787373 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTCGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCCGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CATCCA-ACACCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72363 274 + 192460366 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCCGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------TATCCA-ACACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548176 274 + 19675229 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTCGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCCGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CATCCA-ACACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487257 274 + 16847902 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTCGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCCGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CATCTA-ACACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421115 274 - 91754291 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGGGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGGAGATGAGAACGTTGAGAGCCAGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CATCCA-ACACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 579817 274 - 1977891 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTCGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCTGGGAGACTCCTCAGCTCTG-TGGTCTGATGCATCCT----------------CATCTA-ACACCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 456931 274 + 7796314 TCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAACAACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAGCGTTGAGAGCCGGGAGACTCCTCAGCTCTG-GGGTCTGGTGCATCCT----------------CATCTA-ACACTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 938884 276 - 74750902 TCCCAACACTCACCTCAAGGGAGGAGCTGCCTACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTTTGCACTGCAGTAGCAGACCATGGTCCTGGGCTGGAGTGCAGACGACAAGCCAGTCTTGGCACTTCTTGCTAGAATCTCCAGAGAGAATGGCTTCAGTGACTTGGGTGTCCACAGCAATGTCCCATTCTCTGCCCGGGGGAAAATGAGATCATTGAGAGCTGGGAGACTCCTCTGCTCCG-TGGTCTGATGCATCCT--------------GGCATCTA-ACACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 463598 276 + 17725628 TCCCGACGCTCACCTCCAGGGAGGAGCCGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTTCGCAGTGCAGTGGCAGACCGTGGTCCTGGGCTGGAGAGCAGACGACAGGTTGGTCTTGGCGCTTCTTGCTAGAATCTCCAGAGAGAATGGCTTCAGCGACTTGGGTGTCCACAGCAATGTCCCATTCTCTGCCCCGGGGAAAATGAGATCGTTGAGAGCTGGGAGACTCCTCTGCTCTG-CGGTCTGATGCCTCCT--------------GGCATCTA-ACACCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428180 276 - 6778120 TCCCAACACTCACCTCCAGGGAGGAGCTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTTTGCACTGCAGTGGCAGACCGTGGTCCTGGGCTGGAGTGCAGAGGACAAGCCCGTCTTGGCACTTCTTGCTAGAATCTCCAGAGAGAATGGCTCCAGCGACTTGGGTGTCCACAGCAATGTCCCATTCTCTGCCCCAGGGAAAATGAGATCGTTGAGAGCTGGGAGACTCCTGTGCTCTG-TGGTCTGATGCACCCT--------------GGCATCTA-AAACCC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25905450 250 - 114275543 TCCCAACACTCACCTCCAGAGAGGAATTGCCCACCCTGCTGGTCATGTTATATACACACTGGCTCTCTGCACTGCAATTGCAGACCACGGTCTTGGGCTGGAGTAGGGATGACAAGCCAACCTTGGCGCTTCTTGCTAGAATCTCCAGATTGAATGGTGTCAATGACTTTGGTGTCCATAGCAATGTTCCATTCTCTGCCC-AGGAAAGATGAGATAGTTGAGAGCTGGAAGACTCCTCTGCTCTG-TGGTC---------------------------------------- i micMur3.chr1 I 501 I 107 s proCoq1.NW_012133858v1 7420340 250 + 22200726 TCCCAACACTCACCTCGAGGGAGGAATTGCCCACCCTGCTGGTCTTGTTATATAAACACTGGCTCTCTTTGCTGCAATTGCAGACCACGGTCTTGGGCTGGAGTACGGATGACAAGCCAACTTTGGTGCTTCTTGCTAGAATCTCCAGAGTGAACGGTGTCAATGAGTTTGGTGTCCATAGCAATGTCCCATTCTCTGCCC-AGGAAAGATGAGATCGTTGAGAGCTAGAAGACTCCTCTGCTCTG-TGGTC---------------------------------------- i proCoq1.NW_012133858v1 I 378 I 25 s otoGar3.GL873829 418487 240 - 608964 ----AACACTCACCTCGAGGGAGGAATTGCCCACCCTGCTGGTCTTGTTATATAAGCACTGGCTCTTCGTGCTGCAACTGCAGACCACAGTCTTGGGCTGGAATACA---GACACGCCAACTTT---GTTTCTTGCTAGGATCTCCAGAGTGAATGGTGCCAGTGACTTTGGTGTCCATAGCAATGTCCCATTCTCTGCCC-AAGAAAGATGAGATCATTGAGAGCTGGAAGACTCCTCTGCTCTG-TGGTC---------------------------------------- i otoGar3.GL873829 C 0 I 25 s mm10.chr16 65432839 249 - 98207768 CTCCACTACTCACCTCAAGGGAAGAATTGCCCTCTTTGCTGGTTTCATTGTACAAACACTGCTCCTCCTTACTGCAGAAGCAAGCCACGGTCTTGGGCTGGAGTACCCATGACAAGTTAGTCCTGACATCCCTCGCTAGAATCTCCAGGGTACACGCTTCTGGGGATGTTGGTGTCCACTGCAAACTCCCGTTTTCTGTCC-AGAGAAAAGGAGACC-TCAGTGTCTGGGGGAGCCCTCCGCTCTG-TGGTC---------------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29070534 259 + 31377067 TCCTTTCACTCACCTCCAGGGAGGAATTGCCCATCCAGCCCGTCTGATTATATAGACACTGGCTCCTGTCCTTGCAAGCGCAGACCACTGTCCTTGGCTGGAGCACAGATGACAAGTTGACTTTGACGTTTCTTGCTAGAATCTCCAGGGTGAATGGTTCCAAGGACTTTGGTGTCCACAGCAGTGTCCCGTTCTCTGCCCCAGGGAAGACAAGACCGTT-AGGGCTGGGGGCCTCGGCTGCT-TG-CTGTCTGACACGTCC------------------------------ i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 3895459 289 + 6579706 TCCCAACACTCACCTCAAGGGAGGAATTGCCCACCCAGCTGGTCTGGTTGAATAAACACTGGCTCTCTGCACTGCAATTGCAGACCACGGCCTTGGGCCGGAGTACGGATGCCAAGCCATTCTTGGTATTTCTTGCTAGAATCTCCAGAGTGAATGGTTCCAGTGACTTTGGGGTCCATAGCAATGTCCCGTTCTCTATCCAGGGGAAGACAAGATCATTAAGAGCTGG--GACTCCTCTCCTCTGCTTGTCTGATACATCCTGTAGCTGGTTTTATGGTATCTA-ACAACC i dasNov3.JH569502 C 0 C 0 a score=923278.000000 s hg38.chr3_KI270779v1_alt 127881 104 + 205312 TGATTGCTGATAC-GGGGCT-tcccccacc----cctctcaggccac-cctcccc--ctccccAGA---CAAATCTCATTGGTCATTTCCTTTGAGCAAGGCTGGTATC--GGGGGTG s panTro5.chr3 200117025 103 + 202621043 TGATTGCTGATAT-GGGGCT-TCCCCCACC----CCTCTCAGGCCAC-CCTCCCC--CGCCCCAGA---CAAATCTCATTGGTCATTTCCTTTGTGCAAGGCTGGTATC---GGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92166 102 + 190779 TGATTGCTGATAC-GGGGCT-T-CCCCACC----CCTCTCAGGCCAC-CCTCCCC--CGCCCCAGA---CAAATCTCATTGGTCATTTCCTTTGTGCAAGGCTGGTATC---GGGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56695 105 + 106623 TGATTGCTGATAC-AGGGCT-TCCCCCACC----CCTCTCAGGCCAC-CCTCCCCG-CTCCGCAGA---CAAATCTCATTGGTCATTTCTTTTGAGCAAGGCTGGTATT--GGGGGTG i gorGor5.CYUI01000576v1 I 3 C 0 s nomLeu3.chr11 120874653 105 + 123690457 TGACTGCTGATAC-TGGGCT-TCCCCCACC----CCTCTCAGGCCAC-CCTCCCCC-CTCCCCAGA---CAAATCTCATTGGTCATTTCCTTTGAGCAAGGCTGGTATC--GGGGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465400 102 + 204787373 TGATTGCTGATGC-GGGGCT-TCTCCCACC----CATCTCAGGCCA--CCTCCCCA-CTCCCCAGA---CAAATCTCATTGGTGATTTCCTCTGAGCAAGGCTGGTATC----GGGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72637 102 + 192460366 TGATTGCTGATGC-GGGGCT-TCTCCCACC----CATCTCAGGCCA--CCTCCCCA-CTCCCCAGA---CAAATCTCATTGGTGATTTCCTTTGAGCAAGGCTGGTATC----GGGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548450 102 + 19675229 TGATTGCTGATGC-GGGGCT-TCTCCCACC----CATCTCAGGCCA--CCTCCCCA-CTCCCCAGA---CAAATCTCATTGGTGATTTCCTCTGAGCAAGGCTGGTATC----GGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487531 104 + 16847902 TGATTGCTGATGC-GGGGCT-TCTCCCACC----CCTCTCAGGCCA--CCTCCCCA-CTCCCCAGA---CAAATCTCATTGGTGATTTCCTTTGAGCAAGGCTGGTATC--AGGGGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421389 104 - 91754291 TGATTGCTGGTGC-GGGGCT-TCTCCCACC----CCTCTCAGGCCAC-CCTCCCCA-CTCCCCAGA---CAAATCTCATTGGTCATTTCCTTTGAGCAAGGCTGGTATC---GGGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580091 104 - 1977891 TGATTGCTGACGC-GGGGCT-TCTCCCACC----CCTCTCAGGCCA--CCTCCCCA-CTCCCCAGA---CAAATCTCATTGGTGATTTCCTTTGAGCAAGGCTGGTATC--AGGGGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457205 104 + 7796314 TGATTGCTGGTGT-GGGGCT-TCTCCCACC----CCTCTCAGGCCAC-CCTCCCCA-CTCCCCAGA---CAAATCTCACTGGTCATTTCCTTTGAGCAAGGCTGGTATC---GGGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939160 103 - 74750902 TGATTGCTGATGC--GGGCT-TCCCCC-CC----ACTCTCAGACCAC-CCT-CCCC-TGCCCCAGA---CAGATCTCACTGGTCATTTTCTTTGAGCAAGGCTGGTATG-CGGGGGTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 463874 105 + 17725628 CGATTGCTGATGC--GGGCT-TCCCCCACC----CCTCTCAGATCAC-CCTCCCCC-TGCCCCAGA---CAGATCTCACTGGTCATTTTCTTTGAGCAAGGCTGGTATG-CAGGGGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428456 105 - 6778120 CGATTGCTGATGC--AGGCT-TCCCCCACC----CCTCTGAAACCAC-CCTCCCCC-TGCCCCAGA---CAGATCTCACTGGTCATTTTCTTTGAGCAAGGCTGGTATG-CGGGGCTA i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7420615 84 + 22200726 TGACTGCTGATGCTGGGATT-TCCTCCACC----CTTCTCAGACCAC-CC---------------A---TACATCTCATCAGGCATTTCCTTTGAGC-AGGCTGGTATC--------- i proCoq1.NW_012133858v1 I 25 C 0 s otoGar3.GL873829 418752 95 - 608964 TGATTGCCAATGCTGGGATT-TCCCTTACA----CCTCTCAGACCCCACC---------------AGTTCAAATGTCATCAGGCATTTCCTTTGAGC-AGGCTGATGTC-CTGGGCT- i otoGar3.GL873829 I 25 I 1 s mm10.chr16 65433088 91 - 98207768 --AGTGC--ATCC--TGGCA-TCTAACACTCGAACTACGGAGGTGGT-CTTCCCAC-ACCCTCAGG---CA---------------TCCTTCTGAGTAGAGCTGGGGTTCCCAGGGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29070793 91 + 31377067 TGAGAGCTGATGT-GGGCCT-TTCTCTGCC----TCTCTCAGGCCAC-CCCTCAAA-GTCATCAGG---CA---------------TTTCCTTGAGCTCGGCTGGCTTC-CTGGAGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3895748 93 + 6579706 TGATTGCTGGTGC-TGGACTCTGTCCCACC----CCTTACAGACCAC-CCTCCCCATCTTATCAGG---CG---------------TTTCCTTGAGTAAGGCTGGATTC-CTGGAGTG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25905700 107 - 114275543 I a score=1213622.000000 s hg38.chr3_KI270779v1_alt 127985 90 + 205312 ATCCTGGTCACGCTCCCAGCTGGAAGGACGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCAGTTTCC s panTro5.chr3 200117128 90 + 202621043 ATCCTGGTCATGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCAGTTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92268 90 + 190779 ATCCTGGTCATGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCAGTTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56800 90 + 106623 ATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCAGTTTCC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874758 90 + 123690457 ATCCTAGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCGGTTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465502 90 + 204787373 ATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72739 90 + 192460366 ATCCTGGTCATGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548552 90 + 19675229 ATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487635 90 + 16847902 ATCCTGGTCACGCTCCAAGCTGGAAGAAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421493 90 - 91754291 ATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580195 90 - 1977891 ATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACAGGGGACACCACAGAGGGAAAAGCAGTTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457309 90 + 7796314 ATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939263 90 - 74750902 ATACTGGTCAAACTCCCAGCTGGAAGGAGGTAGCACCAGCCCAACTTACTGACTGTAGCAGGGGACTCCACAGAGGGGAAAGCAGTTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 463979 90 + 17725628 ATGCTGGTCACACCCCCAGCTGGAAGGAGGTCGCACCAGCCCAACTTACTGATTGTAGCAGGGGACGCCACAGAGGGGAGAGCAGTTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428561 90 - 6778120 ATCCTGGTCACACTCCCAGCTGGAAGGAGGTCACACCAGCCCAACTTACTGATTGTAGCAGGGGACACCACAGAGGGGAAAGCAGTTTTC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25905807 89 - 114275543 ATCCTGGTCACGCTCCAAGCTGGAAGGAGGTAGCACCAGCCC-ACGTACTGATTGTAGGCAGGAACTCCTCAGAGAGGAAGGCAGTTTCC i micMur3.chr1 I 107 I 43 s proCoq1.NW_012133858v1 7420699 86 + 22200726 ---CTGGCCAGGCTCCAAGCTGGAAGGAGATAGCATGATCCC-ACTTACTGATTGTAGGCAGGGACTCCTCAGAGGGGAAGGCAGTTCCC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 418848 75 - 608964 ATCTTGGTCACCCTCCACACTGGAAGGAGGTAGCACCAGCTT-GCTTACTG-CCATAGGCAGGAACTCCATAGAGGG------------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65433179 89 - 98207768 ATGGTGGTCATGCTCCTAGCTGGAGGGAGGCAGCACCTGCTGAACATGCTGGGTGTAGGTAGAAATA-CACATAAGGGAAGGCTACCCAC i mm10.chr16 C 0 I 4 s canFam3.chr33 29070884 82 + 31377067 ATCTTGGTC--GCCCCACGCTGG----AGGTAGCATGAGCCCCACTGAGTGATTGCAG-GTGGAACTCCAGAGAGGG-AAGGCAGTTGCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3895841 86 + 6579706 ATCCTGGCCATGCTCCAAGCTGG----AGGTAGCACCAGCCCAACTTACAGATTATAGGACAGAACTCCACAGAGGGGAAGGCAGTTTCC i dasNov3.JH569502 C 0 C 0 a score=604138.000000 s hg38.chr3_KI270779v1_alt 128075 58 + 205312 TCCTG-AAGAAACCCCAAAGGGCAGCCCTGGCTGGGCTCACACCAGGATGGGACATCCT s panTro5.chr3 200117218 58 + 202621043 TCCTG-AAGAAACCCCAAAGGGCAGCCCTGGCCGGGCTCACACCAGGATGGGACATCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92358 58 + 190779 TCCTG-AAGAAACCCCAAAGGGCAGCCCTGGCCGGGCTCACACCAGGATGGGACATCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56890 58 + 106623 TCCTG-AAGAAACCCCAAAGGGCAGCCCTGGCTGGGCTCACACCAGGATGGGACATCCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874848 57 + 123690457 CCCTG-AAGAAACCCCAAA-GGCAGCCCTGGCTGGGCTCACACCAGGATGGGACATCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465592 58 + 204787373 CACTG-AAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72829 58 + 192460366 CACTG-AAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548642 58 + 19675229 CACTG-AAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487725 58 + 16847902 CACTG-AAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421583 58 - 91754291 CACTG-AAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTTCACCAGGATGGCACATGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580285 58 - 1977891 CACTG-AAGAAACCCCAAAGGGAAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457399 58 + 7796314 CCCTG-AAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTCGCACCAGGATGGGACATCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939353 58 - 74750902 CCCTG-AAGAAACCCCAAAGGGCAGCCCCGCCTGGGCTTGCACTAGGATGGGACCTCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464069 57 + 17725628 CCCTG-AAGAAACCCCAAAGGGCAGCCCCGCCTGGGCTTGCACTAGGATGGGCCATCC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428651 58 - 6778120 CCCTG-AAGAAACCCCAAAGGGCAGCCCTGCCTGGGCTTGCACTAGGATGGGCCAACCT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7420785 43 + 22200726 --CTA-AAGAGACCCCAAAGGGCAGTTCC-------------CCAGGATGGCATGTCCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 418923 52 - 608964 -------AGCTACCCCCAAGGGCAGCTCTGCCGGGGCCTGCACCAGTGTGGTACATCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433272 55 - 98207768 TAATG-AAGAGGCCCCTGAATGCATCCCTGCCTGTGGCTGTACCAGGATGGGTCAT--- i mm10.chr16 I 4 C 0 s canFam3.chr33 29070966 50 + 31377067 CCCTG-AAGAGAT--------GCAACCCTGCCCAGGCCTGCACCGGGACGGGACATCTA i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3895927 52 + 6579706 --TTGTAAAAGACCCTAAAGGGCAAAGACCTTTAGGGTGCCCCAAAGA-----CATCCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25905896 43 - 114275543 I a score=879649.000000 s hg38.chr3_KI270779v1_alt 128133 73 + 205312 -GGGGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCGGCCAAACTGGCTTCAC s panTro5.chr3 200117276 73 + 202621043 -GGGGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCAGCCAAACTGGCTTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92416 73 + 190779 -GGGGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCAGCCAAACTGGCTTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 56948 73 + 106623 -GGAGGATGGAGGTT-------CAAGGCCAGGACCCTCCAGACACCTCCCCAGGCTGCGCTGCCGGCCAAACTGGCTTCAC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874905 73 + 123690457 -GGGGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCGGCCAAACTGGCTTCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465650 73 + 204787373 -GGGGGATGGAGGAT-------CAACGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72887 73 + 192460366 -GGGGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548700 73 + 19675229 -GGGGGATGGAGGAT-------CAACGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487783 73 + 16847902 -GGGGGATGGAAGAT-------CAAGGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421641 67 - 91754291 -GGGGGATGGAGGAT-------CAAGGCCAGGGTCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAG------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580343 73 - 1977891 -GGGGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457457 72 + 7796314 -GGGGG-TGGAGGAT-------CAAGGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939411 73 - 74750902 -GGGGGATGCAGGAT-------AAAGGCCAGGGTCCTCCAGACACCTCCCCAGGCTATGCTGCCAGTCAAACTGGTTTCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464126 72 + 17725628 -AGGGGATGCAGGAT--------AAGGCCAGGATCCTCCAGACACCTCCCCAGGCTACGCTGCCAGTCAGACTGGCTTCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428709 71 - 6778120 -CGGGTATACAGGAC--------AATGCCGGGATCCTCCAGGCACCTCCCCGGGCTACAC-ACCACTCAAACTGGCTTCAG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25905939 73 - 114275543 -GGGGGATAGAGGAG-------GAAGGCCAGGATCCTCCCAACACTTTCCCAGGCTACACTGCAAGCCAAACTGGCTTCAC i micMur3.chr1 I 43 I 115 s proCoq1.NW_012133858v1 7420828 73 + 22200726 -GGGGGATGGAGGAC-------AAAGGCCAGGATCCTCCTGACACTTCCCCAGGCTACACTGCAAGCCAAACTGGCTTCAC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 418975 73 - 608964 -GGAGGATGCAGGAT-------GAAAACCAGGATCCTCCCGACTCTTCCCTAGTCTACACTGCAGGCCACACTGCCTTTGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433327 61 - 98207768 -----GATGG-GGAC-------CAAG--CATGGTCCTCTTAACACATCCCCAAACTTCAGTG-----TGGAATGGCTTCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29071017 80 + 31377067 -GAGGGACAGAGAATAAGGCCCCAAGGCTAGGATCCCCTTGATGCTTCCCCAGGCTACCCTGTAGGCAAAACTGGCTTCCC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3895979 43 + 6579706 GGGGACATGGTAGAT-------AAAGGCCAGGATCATCCTGGCACTTCAC------------------------------- i dasNov3.JH569502 C 0 C 0 a score=1165072.000000 s hg38.chr3_KI270779v1_alt 128206 133 + 205312 TCTCACGGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACATA-----------TCTTCAGATCAAA------CT-----GATATTTT s panTro5.chr3 200117349 133 + 202621043 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----TCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACATA-----------TCTTCAGATCAAA------CT-----GATATTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92489 133 + 190779 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----TCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACATA-----------TCTTCAGATCAAA------CT-----GATATTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57021 132 + 106623 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC-----CCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACGTA-----------TCTTCAGATCAAA------CT-----GATATTTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120874978 133 + 123690457 TCTCACAGCAGCCCCATCCTTTGCCCTGGTTTCTCACCCAC----CCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTGCTACATA-----------TCTTCTGATCAAA------CT-----TATATTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465723 132 + 204787373 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCCACTTCCTGGGCCTTT--CCCA-ACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CT-----TACACTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 72960 133 + 192460366 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCTACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CT-----TACACTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548773 132 + 19675229 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCCACTTCCTGGACCTTT--CCCA-ACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CT-----TACACTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487856 133 + 16847902 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CT-----TACACTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421708 44 - 91754291 --------------------------------------------------------------------------------------------ACTGTAGTGAAACACTGCTACACA--------------TCTGATCCAA------CT-----TACACTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580416 133 - 1977891 TCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CT-----TACACTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457529 133 + 7796314 TCTCTCAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC----CCCCCACTTCCTGGACCTTT--CCCAGACACCCCCTTCAGACCCCACACTGTAGTGAAACACTGTTACACA-----------TCTTCTGATCCAA------CT-----TACATTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939484 109 - 74750902 TCTCATGGCAGTCCCATACTTTTCCCTGATTTCTCACCCAC-----CCCCACTTCCTGGACCTTT-GACCAGACAGCCCCTCCA------------------------GCGATATA-----------TCTTCTGATCAAA------TT-----TATATTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464198 133 + 17725628 TGTCACAGCGGCCCCAGCCTTCGCCCTGATTTCTCACCCAC-----CCCCACTTCCTGGACCTTT-GACCAGACACCCGCTTCAGACACCGGACTAGAGGGAAACACGGCGACACA-----------TCTTCTGATCAAA------CT-----TATATTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428780 132 - 6778120 TGTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCAC-----CCCCACTTCCTGGACCTTT-GACCAGACGCCCCCT-CAGACACCGGACTAGAGTGAAAGACGGCGACATA-----------TCTTCTGATCAAA------TT-----TATATTTC i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7420901 139 + 22200726 CCTCACAGTAACCCCAGCCCTAGCCCTGATTTTTCACCCAC---TCTCTCACTTCCCAGACCTTT-GACCAGTCA-CCCCTTCAGGCACCAGACTACAGTGAAAAACTGCTACCTA-----------TCTTCTGATCGAA------CCTGTCTTATGTTTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 419048 132 - 608964 CCTCACAGCAACCCCAGCCCTTGCCTTGATGTCTCACCCAC----CTCTCACTTTCTGGACCTCT-CACCA------CCCTTTAGGCACCATACTGCAGTGAAATCCTGCTACATA-----------TCTTCTGATGGAA------CCTGTC-TATGTTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433388 87 - 98207768 -CTCCCAG----CCTCTCTTCTGCCTTTTTAACGTCCCGTC----CTCTGACTTTCCAGGCCTGG------GATA-CCTCATCAAATGTCAGAATACAGAGAA---------------------------------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29071097 145 + 31377067 CTTCACAGCAGCCCCATCCCTGGCCCTGATTTCTTGCCCACCCTCCTCCCGCTTCTTGCACCTTT-----------GACCTTCAGACACCAGACTACAGTGAAACGCTGCTACGTATCAGCAAGGACTCTTCTGATCCAAAGGTGTCT-----TATGGTTT i canFam3.chr33 C 0 I 5 s dasNov3.JH569502 3896022 139 + 6579706 CTTCACAGAAGCCACTTCCCTTGCC-----------CATCC----CTCTCAATTCCTGGACCTTTTAACCAGCCACCTCCT-CAGACTTCAGACTACAGTGAAACATTGATATACATGTATACAGACTCTTCTGCTAAAA-TGTGTCT-----TAAATTTT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25906012 115 - 114275543 I a score=571511.000000 s hg38.chr3_KI270779v1_alt 128339 45 + 205312 TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA s panTro5.chr3 200117482 45 + 202621043 TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92622 45 + 190779 TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57153 45 + 106623 TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875111 45 + 123690457 TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465855 41 + 204787373 TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73093 41 + 192460366 TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548905 41 + 19675229 TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 487989 41 + 16847902 TCAAGCAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421752 45 - 91754291 TCAAGAAAATAGGAAAACCTCCCTAGAACAGCAGATTGAAAGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580549 41 - 1977891 TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457662 45 + 7796314 TCAAGAAAATAGGAACGTCTCCCTAGAACAGCAGATTGAAAGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939593 45 - 74750902 TCAAGAAAATACGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464331 45 + 17725628 TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428912 45 - 6778120 TCAAGAAAATATGAAAGTCTCCTTAAAACAGCAGGTTGAAAGGAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906127 45 - 114275543 TCAAGAACATGGGAAAATCTCCTTAAAGCAGCAGGTTGAAAGGAA i micMur3.chr1 I 115 I 177 s proCoq1.NW_012133858v1 7421040 45 + 22200726 TCAAGAACATAGGAAAATCTCCTTAAAGCAGCAGGTTGAAAGGAA i proCoq1.NW_012133858v1 C 0 I 173 s otoGar3.GL873829 419180 45 - 608964 TCAAGAAAATAGGAAAGTCTCCTTGAAATAGCAGGTTGATACTAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433475 20 - 98207768 ------------------------TAAAGAACAGCTTGGAAGGA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29071247 38 + 31377067 TTACG-------GAAAGTCTCCTTAAAACAGCAGGTTGAGAATCG i canFam3.chr33 I 5 I 3 s dasNov3.JH569502 3896161 45 + 6579706 TTAATGAATTAGGAAAGTCTTCTTAAAACAGGAGGTTGAAAGGAG i dasNov3.JH569502 C 0 C 0 a score=1515862.000000 s hg38.chr3_KI270779v1_alt 128384 185 + 205312 GTGACAGAG--AATA------GACGAACGTAATTTCCAGACCATCGTCCTTCAGGGGTGGGGCCC-GTGGAGAAGAAAACCTCTC-----------AGTGCCATTG----------------------------------------TCTCGCACCTG--------GGAGGACG-CAC-ATGG------G--------------------------------------------GCAAAAGGGATGCAGGCAAAGCAGTCCCTTCTGAGACACAGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA s panTro5.chr3 200117527 185 + 202621043 GTGACAGAG--AATA------GACGAACGTAATTTCCAGACCATCGTCCTTCAGGGGTGGGGCCC-GTGGAGAAGAAAACCTCTC-----------GGTGCCATTG----------------------------------------TCTCGCACCTG--------GGAGAACG-CAC-GTGG------G--------------------------------------------GCAAAAGGGATGCAGGCAAAGCAGTCCCTTCTGAGACACGGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92667 185 + 190779 GTGACAGAG--AATA------GACGAACGTAATTTCCAGACCATCGTCCTTCAGGGGTGGGGCCC-GTGGAGAAGAAAACCTCTC-----------GGTGCCATTG----------------------------------------TCTCGCACCTG--------GGAGAACG-CAC-GTGG------G--------------------------------------------GCAAAAGGGATGCAGGCAAAGCAGTCCTTTCTGAGACACGGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57198 185 + 106623 GTTACAGAG--AATA------GACGAACATAATTTCCAGACCATCGTCCTTCAGGGGTGGGGCCC-GTGGAGAAGAAAACCTCTC-----------AGTGCCATTG----------------------------------------TCTCGCACCTG--------GGAGGACG-CAC-GTGG------G--------------------------------------------GCAAAAGGGATGCCGGCAAAGCAGTCCCTTCTGAGACACGGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875156 185 + 123690457 GTGACAGAG--AATA------GACGAACGTAATTTCCAGATCATCGTCCTTCAGGGGTGGGGCCC-GTGGAGAAGAGAATCTCTC-----------AATGCCATTG----------------------------------------TCTCGCACCTG--------GGAGGACG-TAC-GTGG------G--------------------------------------------GCAAAAGGGTTGCAGGCAAAGCAGTCCCTTCTCAGACGCGGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202465896 221 + 204787373 GTGACAGAG--AACA------GACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCC-GTGGAGAATAAAATCTCCC-----------AACGCCGTTG----------------------------------------TCTTGCACCTG--------GAAGGACG-CAC-GTGG------G--------GCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGTAAAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73134 221 + 192460366 GTGACAGAG--AACA------GACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCC-GTGGAGAATAAAATCTCCC-----------AACGCCATTG----------------------------------------TCTTGCACCTG--------GAAGGACG-CAC-GTGG------G--------GCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 548946 232 + 19675229 GTGACAGAG--AACA------GACGAACGCAATTTCCAGACCATCATCCTCCAGGGATGGAGCCC-GTGGAGAATAAAATCTCCCGTTAGAATAAAAACGCCGTTG----------------------------------------TCTTGCACCTG--------GAAGGACA-CAC-GTGG------G--------GCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAAAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488030 221 + 16847902 GTGACAGAG--AACA------GACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCC-GTGGAGAACAAAATCTCCC-----------AACGCCGTTG----------------------------------------TCTTGCACCTG--------GAAGGACG-CAC-GTGG------G--------GCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAAAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 421797 221 - 91754291 GTGACAGAG--AACA------GATGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCC-GTGGAGAACAAAATCTCCC-----------AACGCCGTTG----------------------------------------TTTTGCGCCTG--------GAAGGACG-CAC-GTGG------GGCAAAATTGT--------CTCACACCTAGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGACATACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAATGA i chlSab2.chr15 C 0 I 8 s manLeu1.NW_012102020v1 580590 221 - 1977891 GTGACAGAG--AACA------GACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCC-GTGGAGAATAAAATCTCCC-----------AACGCCGTTG----------------------------------------TCTTGCACCTG--------GAAGGACG-CAC-GTGG------G--------GCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACATGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAAAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457707 221 + 7796314 GTGACAGAG--AATA------GACACACACAATTTCCAGACCCTCGTCCTCCAGGGATGGAGCCC-GCGGAGAATAAAATCTCCC-----------AACGCCATCG----------------------------------------TCTTGCACCTG--------GAAGGATG-CAC-GTGGGGCAAAA--------------TTGTCTCACACCTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGACACACGGAGAGAAAGAACATCAGGCAGA-----AAGGCAAAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939638 182 - 74750902 GTCAC---------A------GATGAATGTAATTTCCAGACCCTCATTCTTCAAGGGTGGA--CCGGTGGAGCAGAAAATCTCCC-----------AGTGCCATTG----------------------------------------TCTTACACCTG--------GGAGGACA-CACGGGGG------G---------------------------------------------CAAAGGGGATGCAGGCAGAGCAGTCCCTTCTGACACACAGAGAGGAAGGAACTCAGGCACCCTCCTGAGGCAAAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464376 176 + 17725628 GTGAC---------A------GACGAACGTAATTTCCAGACCCTCATTCTTCAAGGGTGGAGCCCGGTGGAGAAGAAAATCTCCC-----------AGTGCCATTG----------------------------------------TCTTACACCTG--------GGAGGACA-CAC-GTGG------G---------------------------------------------CAAAGGGGGTGCAGGCACAGCGGTCCCTTCTGACACACGGAGAGAAAGAAACTCAGGCA-------GAGGCAAAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 428957 162 - 6778120 GTGAC---------A------GACGAATGTA--------------ATTCTTCAAGTGTGGAGCCCGGTGGAGAAGAAAATCTCCC-----------AGTGCCATTG----------------------------------------TCTTACACCTG--------GGAAGACA-CAC-ATGG------G---------------------------------------------CAAAGGGGATGCGGGCACAGCAGTCCCTTCTGACACACAGAGAGAAAGGAACTCAGGCA-------GAGGCAAAGG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419225 181 - 608964 ----GGTAT--ACTA------GATGGGAGTAATTTCCAGAATGTCA--CCTCAGGAGTCGAACCTAGTGGAGAAGAAAATCTTCT-----------GATGCTA-CA----------------------------------------TCTTGCACCTGGTGGTGGTGGTGGTGC-CAC-ATGG------A--------------------------------------------GCAAACAGAATGCAGAGAGAGGAGTCCCTTCTCATGCACAGAGAAAATGAA------GCAGA-----GAGGTGATCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433495 177 - 98207768 ---ACAGAG--AGTAGGGGTGGAAGGGAGTTAACTTCATACCATCGATTTTCAGGAT----GCCCAGGGTGGCAGAAAGCCGTGT-----------AATGCCACTG-------------------------------------------CATGCCAA--------GGTTGTGC-CAT-AAGG------A--------------------------------------------ACAAAGAACGTGT-GACGGAGTGACCCCTCCGTGCCCAGAAAAGCAAAAGGAGATAGTTTGG-----TGGTCA---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29071288 155 + 31377067 ATAGTAGGG--GACA------GACAAGAGCAGCTCCCAGACTATCACTCTTCAGGAGAGGAGCCCAGGGAGGGAGAAAATCTCCT-----------G-----ATTG----------------------------------------GCTGGCACCTG--------GGAGGCTGCCAC-CTGG------C--------------------------------------------GCCAAAGGG-----CGCAAAG------------------AGAAAGAAAGAAAATGGGCCAGA-----GAG----AGG i canFam3.chr33 I 3 I 6 s dasNov3.JH569502 3896206 227 + 6579706 CTGATGGAGGAAATA------GATGAGAACAACCTCCAGGCCATCGCTCTTCCAGAGAGACATCCAGTGGAGAAGAAAATCTCCT-----------GATGCCATTGTCATCACTCTGGGAGTGGGATTAGACAGTTTTGATCTTTTTCTTCCGCCTG--------AGAGGATGCCAC-GTGG------A--------------------------------------------ACAAAAGGGGTGCAGAAAAAGCAGTACCTTCTTGTGTAC--AGATAAAGAAAATGAGGCGGA-----GAGGTAATCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421085 173 + 22200726 I e micMur3.chr1 25906172 177 - 114275543 I a score=57023.000000 s hg38.chr3_KI270779v1_alt 128569 10 + 205312 GAACGCAAAA s panTro5.chr3 200117712 10 + 202621043 GAACGCAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92852 10 + 190779 GAACGCAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57383 10 + 106623 GAACGCAGAA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875341 10 + 123690457 GAACGCAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466117 8 + 204787373 -AATGCAGA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73355 8 + 192460366 -AATGCAGA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549178 8 + 19675229 -AATGCAGA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488251 8 + 16847902 -AATGCAGA- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 580811 8 - 1977891 -AATGCAGA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457928 8 + 7796314 -AATGCAGA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939820 10 - 74750902 GAACGCAGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464552 10 + 17725628 GAATGCAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429119 10 - 6778120 GAACGCAGAA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419406 10 - 608964 GAGCTCAGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433672 10 - 98207768 GAGTCCAGAG i mm10.chr16 C 0 I 1 s canFam3.chr33 29071449 10 + 31377067 GAGCTCAAAA i canFam3.chr33 I 6 C 0 s dasNov3.JH569502 3896433 10 + 6579706 GAGTTCACAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421085 173 + 22200726 I e micMur3.chr1 25906172 177 - 114275543 I e chlSab2.chr15 422018 8 - 91754291 I a score=74668.000000 s hg38.chr3_KI270779v1_alt 128579 10 + 205312 TATG-CCCCCC-- s panTro5.chr3 200117722 11 + 202621043 TATGCCCCCCC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92862 11 + 190779 TATGCCCCCCC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57393 10 + 106623 TATG-CCCCCC-- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875351 10 + 123690457 TATG-CCCCCT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466125 10 + 204787373 TATG-CCCCCT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73363 10 + 192460366 TATG-CCCCCT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549186 10 + 19675229 TATG-CCCCCT-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488259 10 + 16847902 TATG-CCCCCT-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422026 10 - 91754291 TATG-TCCCCT-- i chlSab2.chr15 I 8 C 0 s manLeu1.NW_012102020v1 580819 10 - 1977891 TATG-CCCCCT-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457936 10 + 7796314 TATG-CCCCCT-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939830 10 - 74750902 CACG-CTCCCT-- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 464562 10 + 17725628 CACG-CTCCCT-- i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 429129 10 - 6778120 CACG-CTCCCT-- i cebCap1.NW_016107444v1 C 0 I 1 s otoGar3.GL873829 419416 10 - 608964 TATG-GTCCCT-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433683 10 - 98207768 CAGG-TCCCTG-- i mm10.chr16 I 1 C 0 s canFam3.chr33 29071459 10 + 31377067 TAAG-GTCCCT-- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3896443 12 + 6579706 CAAG-GTTACTTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421085 173 + 22200726 I e micMur3.chr1 25906172 177 - 114275543 I a score=49012.000000 s hg38.chr3_KI270779v1_alt 128589 4 + 205312 GGGG s panTro5.chr3 200117733 4 + 202621043 AGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92873 4 + 190779 AGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57403 4 + 106623 GGGG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875361 4 + 123690457 GGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466135 4 + 204787373 GGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73373 4 + 192460366 GGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549196 4 + 19675229 GGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488269 4 + 16847902 GGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422036 4 - 91754291 GGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580829 4 - 1977891 GGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457946 4 + 7796314 GGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939841 4 - 74750902 GGGG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 464573 4 + 17725628 GGGG i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 429140 4 - 6778120 GGGG i cebCap1.NW_016107444v1 I 1 C 0 s proCoq1.NW_012133858v1 7421258 2 + 22200726 --GG i proCoq1.NW_012133858v1 I 173 I 2 s otoGar3.GL873829 419426 4 - 608964 GTGG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65433693 4 - 98207768 ATGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29071470 4 + 31377067 ATGG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3896455 4 + 6579706 AGGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25906172 177 - 114275543 I a score=372347.000000 s hg38.chr3_KI270779v1_alt 128593 26 + 205312 CTTTGGTTTAGCCAAGAACAGTCACC s panTro5.chr3 200117737 26 + 202621043 CTTTGGTTTAGCCAAGAACAGTCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92877 26 + 190779 CTTTGGTTTAGCCAAGAACAGTCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57407 26 + 106623 CTTTGGTTTAGCCAAGAACAGTCACC i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875365 26 + 123690457 CTTTGGTTTAGCCAAGAACAGTCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466139 26 + 204787373 CTTTGGTTTAGCCAAGAACAGTCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73377 26 + 192460366 CTTTGGTTTAGCCAAGAACAGTCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549200 26 + 19675229 CTTTGGTTTAGCCAAGAACAGTCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488273 26 + 16847902 CTTTGGTTTAGCCAAGAACAGTCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422040 26 - 91754291 CTTTGGTTTAGCCAAGAACAGTCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580833 26 - 1977891 CTTTGGTTTAGCTAAGAACAGTCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457950 26 + 7796314 CTTTGGTTTAGCCAAGAACAGTCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939845 25 - 74750902 CTTTGGTTTAGCCAAGAACAGCCA-C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464577 25 + 17725628 CTTTGGTTTGGCCAAGAACAGCCC-C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429144 25 - 6778120 CTTTGGTTTAGCCAAGAACAGCCA-C i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906349 26 - 114275543 CTTTGGTTTAGCAAAGAACAGTCACC i micMur3.chr1 I 177 I 206 s proCoq1.NW_012133858v1 7421262 26 + 22200726 CTTTGGTTTAGCAAAGAACAGTCACC i proCoq1.NW_012133858v1 I 2 I 221 s otoGar3.GL873829 419431 26 - 608964 CTTTACTTTAGCAAAGAACGATCACC i otoGar3.GL873829 I 1 I 2 s mm10.chr16 65433697 24 - 98207768 TTCTGGTTTAGCAAAGAA-AGTCAC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29071474 26 + 31377067 CTTTAGTTTAGCAAAGAATAGTCTTT i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3896459 24 + 6579706 ACTTGGTTTTGC--AGAGGAGTTGCC i dasNov3.JH569502 C 0 C 0 a score=-22330.000000 s hg38.chr3_KI270779v1_alt 128619 32 + 205312 --CTCAGAATTAGTGCTGGCAACAGACAGAAAGT s panTro5.chr3 200117763 32 + 202621043 --CTCAGAATTAGTGCTGGCAACAGACAGAAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92903 32 + 190779 --CTCAGAATTAGTGCTGGCAACAGACAGAAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57433 32 + 106623 --CTCAGAATTAGTGCTGGCAAGAGACAGAAAGT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875391 5 + 123690457 --CGCAG--------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466165 5 + 204787373 --CACAG--------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73403 5 + 192460366 --CACAG--------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549226 5 + 19675229 --CACAG--------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488299 5 + 16847902 --CACAG--------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422066 5 - 91754291 --CACAG--------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580859 5 - 1977891 --CACAG--------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457976 5 + 7796314 --CGCAG--------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939870 5 - 74750902 --CGCAG--------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464602 5 + 17725628 --CGCAG--------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429169 5 - 6778120 --CGCAG--------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419459 10 - 608964 --CATAG--TTAGT-------------------- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 29071502 30 + 31377067 --CATAA--GTGGTGCTGGCAACTGAAGGGAAGT i canFam3.chr33 I 2 I 192 s dasNov3.JH569502 3896483 32 + 6579706 GGCACCA--CTAGTGCTGACAACAGAAGGAAAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421288 221 + 22200726 I e micMur3.chr1 25906375 206 - 114275543 I e mm10.chr16 65433721 0 - 98207768 C a score=63440.000000 s hg38.chr3_KI270779v1_alt 128651 43 + 205312 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC--- s panTro5.chr3 200117795 43 + 202621043 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92935 43 + 190779 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57465 43 + 106623 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC--- i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875396 13 + 123690457 ------------------------------AATTAGTGCTGGC--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466170 13 + 204787373 ------------------------------AATTAGTGCTGGC--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73408 13 + 192460366 ------------------------------AATTAGTGCTGGC--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549231 13 + 19675229 ------------------------------AATTAGTGCTGGC--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488304 13 + 16847902 ------------------------------AATTAGTGCTGGC--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422071 13 - 91754291 ------------------------------AATTAGTGCTGGC--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580864 13 - 1977891 ------------------------------AATTAGTGCTGGC--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457981 13 + 7796314 ------------------------------AATTAGTGCTGGC--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939875 13 - 74750902 ------------------------------AATTAGTGCTGGC--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464607 13 + 17725628 ------------------------------AATTAGTGCTGGC--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429174 13 - 6778120 ------------------------------AATTAGTGTTGGT--- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419469 6 - 608964 -------------------------------------GCTGGC--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433721 10 - 98207768 ---------------------------------CATCCCTTCC--- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3896515 27 + 6579706 -------------------TGCATCTCTCAGGTTTCGACTCTTTGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421288 221 + 22200726 I e micMur3.chr1 25906375 206 - 114275543 I e canFam3.chr33 29071532 192 + 31377067 I a score=1481196.000000 s hg38.chr3_KI270779v1_alt 128694 167 + 205312 AACAGAC-GAAAGCAGCGTCCCTTGTGCTTG--GAGCCTTTGGCCCTGATCATGGATG-------TAGGGCTCGGGGTCTCTAACACCTTTACGGAG-AGGGAGCGATGGCACTCTACTGGGTCCTAGCCCAGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACA----TGGTTGCCAG s panTro5.chr3 200117838 167 + 202621043 AACAGAC-GAAAGCAGCATCCCTTGTGCTTG--GACCCTTTGGCCCTGATCATGGATG-------TAGGGCTCGGGGTCTCTAACACCTTTACGGAG-AGGGAGCGATGGCACTTTACTGGGTCCTAGCCCAGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACA----TGGTTACCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 92978 167 + 190779 AACAGAC-GAAAGCAGCATCCCTTGTGCTTG--GACCCTTTGGCCCTGATCATGGATG-------TAAGGCTCGGGGTCTCTAACACCTTTACGGAG-AGGGAGCGATGGCACTTTACTGGGTCCTAGCCCAGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACA----TGGTTACCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57508 167 + 106623 AACAGAC-GAAAGCAGCATCACTTGTGCTTG--GACCCTTTGGCCCTGATCATGGATG-------TAGGGCTCGGGGTCTCTAACACCTTTATGGAG-AGGGAGCGATGGCACTTTACTGGGTCCTAGCCCGGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACA----TGGTTACCAG i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875409 169 + 123690457 AATGGAC-GAAAGTGGCATCCCTTGTGCTTG--GACCCTTTCGCCCTGATCATGGATG-------TAGGGCTCGGGGTCTCTAACACCTTTACGGAG-AGGGAGCGATGGCACTTTACTGGGTCCTAGCCCAGGAAACCAGGCAAGGAGAGACATGGCTATAGGTAAACA----TGGTTACCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466183 164 + 204787373 AACAGGC----AGCGGCATCCCTTGTGCTGG--GACCCTTTGGCCCTGATCGTGGATG-------CAGGGCTCAGGGTCTCTAACACCTTTATGGAG-AGGAAACGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACA----CGGTTACCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73421 164 + 192460366 AACAGGC----AGCGGCATCCCTTGTGCTGA--GACCCTTTGGCCCTGATCGTGGATG-------CAGGGCTCAGGGTCTCTAACACCTTTATGGAG-AGGAAACGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACA----CGGTTACCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549244 164 + 19675229 AACAGGC----AGCGGCATCCCTTGTGCTGG--GACCCTTTGGCCCTGATCGTGGATG-------CAGGGCTCAAGGTCTCTAACACCTTTATGGAG-AGGAAACGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACA----CGGTTACCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488317 164 + 16847902 AACAGGC----AGCGGCATCCCTTGTGCTGG--GACCCTTTGGCCCTGATCATGGATG-------CAGGGCTCAGGGTCTCTAACACCTTTATGGAG-AGGAAACGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACA----CGGTTACCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422084 160 - 91754291 AACAGGC----AGCGGCATCCCTTGTGCTGG--GATCCTTTGGCCCTGATCGTGG-----------AGGGCTCAGGGTCTCTCACACCTTTATGGAG-AGGAAGCGATGGTACGTTACTGGGTCCTAGTCCAGGAAATCAGGCAAGGAGAGACACAGC--TAGGTAAACA----CGGTTACCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 580877 164 - 1977891 AACAGGC----AGCGGCATCCCTTGTGCTGG--GACCCTTTGGCCGTGATCGTGGATG-------CAGGGCTCAGGGTCTCTAACACCTTTATGGAG-AGGAAGCGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACA----CGATTACCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 457994 171 + 7796314 AACAGAC----AGCGGCATCGCTTGTGCTGG--GACCCCTTGGCCCTGATCGTGGATGCAGGACTCAGGGCTCAGGGTCTCGAACACCTTTATGGGG-AGCGAGCGATGGTACTTTACTGGGTCCTACCCCAGGAAACCAGACAAGGAGAGACACAGT--TAGGTAAACA----CGGTTACCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 939888 169 - 74750902 AACAGACAGAGAGCGGCATCCCCTATTCTTTGAGACCCTTTGGCCCTGATCATGGATG-------CAGGTCTTGGAGTCTCTAACACCTTTACAGAG-AGGGACCCGTGACGCCTTACTGGGTCCTA-TCCAGGAAACCAGACGAGGAGAGACACAGC--TAGGTTAACA----TGGTTACCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464620 166 + 17725628 AACAGACAGACAGCGGCGTCCCCTGTGCTTT--GACCCTTTGGCCCTGATCATGGATG-------CAGGCCTCGGAGTCTCTCACACCTTTACAGAG-AGGGACCCACGACGCCTTACCGGGCCCTAGTCCAGGAAACCAGACGAG--GAGACACAGC--TGCGTAAACA----TGGTTACCAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429187 168 - 6778120 AACAGACAGACAGCGGCGTCCCCTGTGCTTT--GACCCTTTGGCCCCGATCACGGATG-------CAGGCCTCGGAGTCCCTAACACCTTTACAGAG-AGGGACCCATGACGCCTTACTGGGTCCTGGTCCAGGAAACCAGAAGAGGAGAGACACAGC--TGGGTAAACG----TGGTTACCAC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419475 153 - 608964 AACACATGGAAGGCTGCATCCCTTGTGCTCT--GACCCTCTGATCTAGACCAAGGATG-------CAGGCCTGGGGGTCT--AACAACATTGCCAGG-AGGGAAAGATGA----------------AGCACAGAAAATCAGACAAGG-GTAACAAAGC--TAGATTAACAGGCGTGGTTAACGA i otoGar3.GL873829 C 0 I 2 s mm10.chr16 65433731 130 - 98207768 AA-------------------------CTTT--GGCCCTTCAATCC-------AGCTG-------CCAG-CCCAGGTTCTCAGATCCCATTACTAAGAAGGGAAGAATTGTG------TTAGTCCCAATCCAGAAAATCAGACAAGGAGACAGAAAAC--CAGATAAGCA----TAGCTAATGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29071724 165 + 31377067 -AAAGAAGGGAAGTTGCATCCTGTGGGCTTT--GACTTTTCCACCCAGGTCACGGTTT-------TAGGACGAGGGGTCTCC-ACACCAGTACTGAC-AGGCAGAAATGAGGCTTTGCTTGGTCCCAGTACAGAAGAGCA-ACAGGGAGAGACAGAGT--TGGGCAATCG----TGGTTGACCG i canFam3.chr33 I 192 C 0 s dasNov3.JH569502 3896542 124 + 6579706 --------------------------------------------CCATATCACAGGTA-------CAGGCCTGGGAG-CTCTCAAACCATCACCAAG-AGGGAGAGACAATG-TTTGCTTGGTCCCAGGACAGAAAATCAGATGAGGAAAGACAGAGC--TAGGGATGCA----TGGTTAACAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421288 221 + 22200726 I e micMur3.chr1 25906375 206 - 114275543 I a score=172521.000000 s hg38.chr3_KI270779v1_alt 128861 15 + 205312 AC--AAAAAGAGCAAGA s panTro5.chr3 200118005 15 + 202621043 AC--AAAAAGAGCAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93145 15 + 190779 AC--AAAAAGAGCAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57675 15 + 106623 AC--AAAAAGAGCAAGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875578 15 + 123690457 AC--AAAAAGAGCGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466347 17 + 204787373 ACATAAAAAGAGCAAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73585 17 + 192460366 ACATAAAAAGAGCAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549408 17 + 19675229 ACATAAAAAGAGCAAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488481 17 + 16847902 ACATAAAAAGAGCAAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422244 17 - 91754291 ACATAAAAAGAGCAAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581041 17 - 1977891 ACATAAAAAGAGCAAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458165 17 + 7796314 ACACAAAAAGAGCAAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940057 17 - 74750902 AGACAAAAAGAGCAAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464786 17 + 17725628 ACATAAAAAGAGCAAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429355 17 - 6778120 ACATAAAAAGAGCAAGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906581 15 - 114275543 --ACAAAAATAGTGAGA i micMur3.chr1 I 206 C 0 s otoGar3.GL873829 419630 15 - 608964 --ATGAAAACAGTGAGA i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65433861 15 - 98207768 CCATAAAAACAACGA-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29071889 17 + 31377067 ACATAAAAATAATGAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896666 17 + 6579706 ACATCAAAACAGTGAGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421288 221 + 22200726 I a score=1533320.000000 s hg38.chr3_KI270779v1_alt 128876 121 + 205312 AAGGTACCAAACGAAAGTATTTTTCATATTTCTTTAAATCTTGTCCTACATTAGAGCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT s panTro5.chr3 200118020 121 + 202621043 AAGGCACCAAACGAAAGTATTTTTCATATTTCTTTAAATCTTGTCCTACACTAGAACCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93160 121 + 190779 AAGGCACCAAACGAAAGTATTTTTCATATTTCTTTAAATCTTGTCCTACATTAGAGCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57690 121 + 106623 AAGGTAACAAACGAAAGTATTTTTCCTATTTCTTTAAATCTTGTCCTACATCAGAGCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875593 121 + 123690457 AAGGTACCAAACAAAAGTATTTTTTATATTCCTTTAAATCTTGTCCTACATTACATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466364 121 + 204787373 AAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73602 121 + 192460366 AAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549425 121 + 19675229 AAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488498 121 + 16847902 AAGGTACCAAATGAAAGTATTGTTTATATTTCTTGAAGTGTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAGTGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422261 121 - 91754291 AAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581058 121 - 1977891 AAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458182 121 + 7796314 AAGGTACCAAATGAAAGTATTTTTTATATGTCTTTAAATCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATCATTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940074 117 - 74750902 AAGGTAGTAAACAAAAGTA-TTTTTATATTTCTTTAAATTT--TCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGT-AACTGGTAATT-TTAAACTGTTGCACTTGATT-TTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464803 120 + 17725628 AAGGTAGTAAACAAAAGTATTTTTTATATTTCTTTAAATTTTGTCCTATATTAGATGCTTCCTTTAATAGGTATAAAAATGTTGT-AATTGGTACTT-TTAAACTGTTGCACTTGATT-TTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429372 120 - 6778120 AAGGCAGTGAACAAAAGTATTTTTTATATTAGTTTAAATTTTGTCCTGCATTAGATGCTTCCTTTGATAGATACAAAAATGTTGT-GATTGGTAATT-TTAAACTGTTGCACTTGATT-TTCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906596 119 - 114275543 AAGGTACCAAATGAAGGTA---TTTGTATTTCTTTAAATCTTGTCCCACATTATATCTTTCTTTTAATAGACATAAAAATGTTATAAATTAGTATTT-TTAAATTGTTTTACTTGATTATTCT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7421509 119 + 22200726 AAGGTACCAAATGAAGGTA---TTTGTATTTCTTTAAATCTTGTCCCACATTATATCCTTCTTTTAATAGACATAAAAATGTTGTAAATTAGTATTT-TTAAATTGTTTTACTTGATTATTCT i proCoq1.NW_012133858v1 I 221 C 0 s otoGar3.GL873829 419645 119 - 608964 AAGGTACCAAATGAAACTA---TTTGTATTTCTTTAAATCCTGTTCCACATGCTATTCTTCTTTTCATACATATAAAAATGTTGTAAACTGACATTT-TTAAATGGTTGTACTTGATTATTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65433876 112 - 98207768 AAAGTACC-AGTGAAGCTA---TTTATATGTTTT--GATCTCATTCCACAGTGTGTTATTCATTTAATAGATATGATAATGCTTTAAACTCATTGGT-TT----TATCACATTTATTTATCTT i mm10.chr16 C 0 I 1951 s canFam3.chr33 29071906 115 + 31377067 ACCACGCCGAATGAAGCTA---TTTATA--CCTTTAAATCCTGTTCCACGTGATAGCCTTCTTTTAATAGATTTGAAAATGCTTTAGATCAGTATTTGTTAAATTGTTACACTCTATTCT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896683 116 + 6579706 AAGGTATCAAACAAAGGCA---TTTGTATTTCTTTAAATCTTGTTTCTCATTAAATCCT---TTTAACACATATAGAAATATTTAAAATTAGCATTT-GTTCATTACAGTACTTGATTATTCT i dasNov3.JH569502 C 0 C 0 a score=180337.000000 s hg38.chr3_KI270779v1_alt 128997 13 + 205312 AATAATTTG-GTGA s panTro5.chr3 200118141 13 + 202621043 AATAATTTG-GTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93281 13 + 190779 AATAATTTG-GTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57811 13 + 106623 AATAATTTG-GTGA i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875714 13 + 123690457 AATAATTTG-GTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466485 13 + 204787373 AATACTTTG-GTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73723 13 + 192460366 AATACTTTG-GTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549546 14 + 19675229 AATACTTTGAGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488619 13 + 16847902 AATACTTTG-GTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422382 13 - 91754291 AATACTTTG-GTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581179 13 - 1977891 AATACTTTG-GTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458303 13 + 7796314 AATAATTTG-GTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940191 13 - 74750902 AATAATTTG-GTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464923 13 + 17725628 AATAATTTG-GTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429492 13 - 6778120 AATAATTTG-GTGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906715 13 - 114275543 AATATTTTG-GTGA i micMur3.chr1 C 0 I 71 s proCoq1.NW_012133858v1 7421628 13 + 22200726 AATAGTTTG-GTGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 419764 13 - 608964 AATGATTTG-ATGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29072021 13 + 31377067 AGTAATTCG-GTGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896799 13 + 6579706 AACAATCAA-GTGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I a score=212688.000000 s hg38.chr3_KI270779v1_alt 129010 27 + 205312 ATGCATA---ATGACTAAAGATGACTATAT s panTro5.chr3 200118154 24 + 202621043 ATGC------ATGACTGATGATGACTATAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93294 24 + 190779 ATGC------ATGACTGATGATGACTATAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57824 27 + 106623 ATGCATA---ATGACTAAAGATGATTATAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875727 27 + 123690457 ATGCATA---ATGGCTAAAGATGACTGTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466498 27 + 204787373 ATGCATA---ATGATTAAAGATGACTGCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73736 27 + 192460366 ATGCATA---ATGATTAAAGATGACTGCGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549560 25 + 19675229 ATGCATA---AT-ATTAAAGATGACTGC-T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488632 27 + 16847902 ATGCATA---ATGATTAAAGATGACTGCGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422395 27 - 91754291 ATACATA---ATGATTAAAGATGACTGCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581192 27 - 1977891 ATGCATA---ATGATTAAAGATGACTGCGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458316 27 + 7796314 ATGCGTA---ATGATTAAAGATGACTGTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940204 30 - 74750902 ATGCATAAGGATAATTAAAGATGACTGCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464936 27 + 17725628 ATGCATA---GTAATTAAAGACGACTGCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429505 30 - 6778120 ATGCATAATGATAATTAAAGACGGCTGCAT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7421641 30 + 22200726 CTGCATAATGATGATTAAAGATGATAGCAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 419777 30 - 608964 ATGCATAATGATGATTAAAGATGATTGCAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29072034 30 + 31377067 CCGCATCAAGCTGGTTAAAGATGATCGTGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896812 18 + 6579706 TTGAATA---A-----AAAGCTTACT---- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25906728 71 - 114275543 I e mm10.chr16 65433988 1951 - 98207768 I a score=282565.000000 s hg38.chr3_KI270779v1_alt 129037 27 + 205312 ATGATCAGATTGAGATTAAATGATCTT s panTro5.chr3 200118178 27 + 202621043 ATGATCAGATTGAGATTAAATGATCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93318 27 + 190779 ATGATCAGATTGAGATTAAATGATCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57851 27 + 106623 ATGATCAGATTGAGATTAAATGATCTT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875754 27 + 123690457 ATGATCAGATTGAGATTAAATGATCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466525 27 + 204787373 ATGATCAGATTGAGATTAAATGATCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73763 27 + 192460366 ATGATCAGATTGAGATTAAATGATCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549585 25 + 19675229 ATGATC-GATTGAGATTAAATG-TCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488659 27 + 16847902 ATGATCAGATTGAGATTAAATGATCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422422 27 - 91754291 ATGATCAGATTGAGATTAAATGATCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581219 27 - 1977891 ATGATCAGATTGAGATTAAATGATCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458343 27 + 7796314 ATGAACAGATTGAGATTAAATGATCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940234 27 - 74750902 ATGATCAGATTGAGATTAAATAATCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464963 27 + 17725628 ATGATCAGATTGAGATGAGACAATCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429535 27 - 6778120 ATGATCAGATTGAGATTAAATAATCTT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7421671 27 + 22200726 ATTATTAGATTGAGATTAAGTGATCTT i proCoq1.NW_012133858v1 C 0 I 11 s otoGar3.GL873829 419807 16 - 608964 ATTATTAGACTGAGAT----------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3896830 24 + 6579706 ---ATTATATTGAGATGGACTGCTCTT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25906728 71 - 114275543 I e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072064 0 + 31377067 C a score=33435.000000 s hg38.chr3_KI270779v1_alt 129064 5 + 205312 CAAAt s panTro5.chr3 200118205 5 + 202621043 CGAAt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93345 5 + 190779 CGAAt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57878 5 + 106623 CTAAT i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875781 5 + 123690457 CGCAt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466552 5 + 204787373 TGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73790 5 + 192460366 TGAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549610 5 + 19675229 TGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488686 5 + 16847902 TGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422449 5 - 91754291 TGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581246 5 - 1977891 TGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458370 5 + 7796314 TGAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940261 5 - 74750902 TGAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464990 5 + 17725628 TGAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429562 5 - 6778120 TGAAT i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3896854 5 + 6579706 TGAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419823 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072064 0 + 31377067 C a score=368538.000000 s hg38.chr3_KI270779v1_alt 129069 58 + 205312 c---------------------ttttttttgagacagagtctcgctctgtca-ccaggctggagtgcagtgacgcgat-ct s panTro5.chr3 200118210 71 + 202621043 c---ttttttt-----ttttttttttttttgagacagagtctcgctctgtca-ccaggctggagtgcagtgacgcgat-ct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93350 67 + 190779 c-------ttt-----ttttttttttttttgagacagagtctcgctctgtca-ccaggctggagtgcagtgacgcgat-ct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57883 74 + 106623 Ctttttttttt-----ttttttttttttttgagacagagtctcgctctgtca-ccaggctggagtgcagtgacgcgat-ct i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875786 64 + 123690457 c---------------ttttttttttttttgagacagagtcttgctctgtca-ccaggctggagtacagtgacgcgat-ct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466557 71 + 204787373 C-AGttttgtt--------tttttttttttgagatggagtctcgctctattgcccaggctggagtgcagtgacgcgat-ct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73795 74 + 192460366 C-AGttttgtt-----ttgtttttttttttgagatggagtcttgctctattgcccaggctggagtgcagtgacgcgat-ct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549615 67 + 19675229 C-AGtttt-----------tttttttttttgagatggagtctcgctctatg--ccaggctggagtgagatgacgcgatcct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488691 72 + 16847902 C-AGttttttt-----t--tttgttgttttgagatggagtctcgctctattgcccacgctggagtgcagtgacgcgat-ct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422454 79 - 91754291 C-AGtttttttttttctttttctttttttcgagatggagtctcgctctattgcccaggctggagtgcagtgatgcgat-ct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581251 74 - 1977891 C-AGttttttt-----gttgttgttgttttgagatggagtctcgctctattgcccacgctggagtgcagtgacgcgat-ct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458375 69 + 7796314 C-AGttttttt----------tttttttttgagatggagtctcgctctattgcccaggctggagtgcagtgacgcgat-ct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940266 65 - 74750902 T-AGttcc-tt-------------tttattgagacagaatcttgctctgttgctcaggctggagtacagtgactcgat-ct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 464995 66 + 17725628 C-AGttccttt-------------tttgttgaggtggagtcttgctctgttgctcaggttggagtacagtgactcgat-ct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429567 66 - 6778120 C-AGttccttt-------------tttgttgaggtggagtcttgctctgttgctcaggctggagtgcagtgattcgat-tt i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419823 10 - 608964 ----------------------------------------------------------------------GAAGCGAT-CT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896859 0 + 6579706 C e canFam3.chr33 29072064 0 + 31377067 C a score=186755.000000 s hg38.chr3_KI270779v1_alt 129127 21 + 205312 cagctcactgcaacatctgcc s panTro5.chr3 200118281 21 + 202621043 cagctcactgcaacatctgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93417 21 + 190779 cagctcactgcaacatctgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57957 21 + 106623 cagctcactgcaacatctgcc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875850 21 + 123690457 cagctcactgcaacatctgcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466628 21 + 204787373 cagttcactgcaacatctgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73869 21 + 192460366 cagttcactgcaacatctgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549682 20 + 19675229 cagttcactgcaacatctg-c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488763 21 + 16847902 cagttcactgcaacatctgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422533 21 - 91754291 cagttcactgcaacatctgcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581325 21 - 1977891 cagttcactgcaacatctgcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458444 21 + 7796314 cagctcactgcaacatctgcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940331 21 - 74750902 cggctcacggcaacatctgcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465061 21 + 17725628 cagctcactgcaacatctgcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429633 21 - 6778120 cggctcactgccacgtctgcc i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896859 0 + 6579706 C e canFam3.chr33 29072064 0 + 31377067 C a score=88072.000000 s hg38.chr3_KI270779v1_alt 129148 10 + 205312 tcctgggttc s panTro5.chr3 200118302 10 + 202621043 tcctgggttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93438 10 + 190779 tcctgggttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57978 10 + 106623 tcctgggttc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875871 10 + 123690457 tcctgggttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466649 10 + 204787373 tcctaggttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73890 10 + 192460366 tcctaggttc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549702 10 + 19675229 tcctaggttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488784 10 + 16847902 tcctaggttc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422554 10 - 91754291 tcctaggttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581346 10 - 1977891 tcctaggttc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458465 10 + 7796314 tcctgggttc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940352 10 - 74750902 tcccgggctc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465082 10 + 17725628 tcgtgggctc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429654 10 - 6778120 tcgcgggctc i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29072064 10 + 31377067 TACTGGGTTT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896859 0 + 6579706 C a score=241301.000000 s hg38.chr3_KI270779v1_alt 129158 29 + 205312 aagcgattctcctgcctcagtctcctgag s panTro5.chr3 200118312 29 + 202621043 aagcgattctcctgcctcactctcctgag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93448 29 + 190779 aagcgattctcctgcctcactctcctgag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 57988 29 + 106623 aagcgattctcctgcctcagtctcctgag i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875881 29 + 123690457 aagcgattctcctgcctcagtctcctgaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466659 29 + 204787373 aagcgattcttctgcctcagtctcccgaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73900 29 + 192460366 aagcgattcttctgcctcagtctcccgaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549712 29 + 19675229 aagcgattcttctgcctcagtctcccgaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488794 29 + 16847902 aagtgattcttctgcctcagtctcccgaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422564 29 - 91754291 aagcgattcttctgcctcagtctcccgaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581356 29 - 1977891 aagcgattcttctgcctcaatctcccgaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458475 29 + 7796314 aagcgattcttctgcctcagtctcccaaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940362 29 - 74750902 aagtgattctcttgcctcagcctcccaag i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465092 29 + 17725628 aagtgattctcctgcctcagcctcccagg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429664 29 - 6778120 aggtgattctcctgcctcagcctcccagg i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896859 0 + 6579706 C e canFam3.chr33 29072074 0 + 31377067 C a score=282940.000000 s hg38.chr3_KI270779v1_alt 129187 34 + 205312 tagctgggattacaggcatgcaccaccatgcctg s panTro5.chr3 200118341 34 + 202621043 tagctgggattacaggcatgcaccaccatgcctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93477 34 + 190779 tagctgggattacaggcatgcaccaccatgcctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58017 34 + 106623 tagctgggattccaggcatgcaccaccatgcctg i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875910 34 + 123690457 gagctgggattacaggcatgcaccaccacgcccg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466688 34 + 204787373 gagctgggattacaggcacccgccaccatgcctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73929 34 + 192460366 gagctgggattacaggcacccgccaccatgcctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549741 34 + 19675229 gagctgggattacaggcacccgccaccatgcctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488823 34 + 16847902 gagctgggattacaggcacccgccaccatgcctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422593 34 - 91754291 gaactgggactacaggcacccgccaccatgcctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581385 34 - 1977891 gagctgggattacaggcacccgccaccatgcctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458504 34 + 7796314 gagctgggattacaggcacccgccaccatgcctg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940391 34 - 74750902 taactgggattacaggcgcctgccactacgcctg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465121 34 + 17725628 tagctgggattacaggtgcctgccaccatgcctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429693 34 - 6778120 tagctgggattacaggcgcctaccaccacgcctg i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3896859 16 + 6579706 TAGTTGT------------------CCATGCCTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072074 0 + 31377067 C a score=827511.000000 s hg38.chr3_KI270779v1_alt 129221 111 + 205312 gc---ttttttttttttttttgtatttttagtacagacggggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatccgcccacctcggcctcccaaagc s panTro5.chr3 200118375 114 + 202621043 gctttttttttttttttttttgtatttttagtagagacagggtttcaccatgttggccagactggtgtcgaactcctgacctcagatgatccgcccacctcggcctcccaaagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93511 105 + 190779 gt---------ttttttttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatccgcccacctcggcctcccaaagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58051 107 + 106623 gc-------ttttttttttttgtatttttagtagagatggggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatccacccacctcggcctcccaaagc i gorGor5.CYUI01000576v1 C 0 C 0 s nomLeu3.chr11 120875944 104 + 123690457 gc----------tatttttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatccgcccgcctcggcctctcaaagc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466722 104 + 204787373 gc----------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 73963 104 + 192460366 gc----------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549775 102 + 19675229 gc----------tatttttt--gttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488857 104 + 16847902 gc----------tatttttttgtttttttagtagagatggggtttcaccatgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422627 104 - 91754291 gc----------tatttttttgtttttttagtagagatggggtttcactgtgttggccaggctggtcttaaactcctgacctcagatgatccacctgcgtcggcctcccaaagt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581419 104 - 1977891 gc----------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458538 104 + 7796314 gc----------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcctcggcctcccaaagt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940425 103 - 74750902 gc----------tatctttt-atatttttagtacagaagggctttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccaccgtggcctcccaaagt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465155 103 + 17725628 gc----------tatctttt-atatttttagtacagaagggatttcactatgttggccaggctggtctgggactcctgacctcaggtgatctgcccaccttggcctcccaaagt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429727 103 - 6778120 gc----------tatctttt-atatttttagtacagaaggggtttcaccatgtcgtccaggctggtctcaaactcctgacctcaggtgatccacctgccccagcctcccaaaga i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896875 0 + 6579706 C e canFam3.chr33 29072074 0 + 31377067 C a score=111596.000000 s hg38.chr3_KI270779v1_alt 129332 14 + 205312 gctgg----gatgacagg s panTro5.chr3 200118489 14 + 202621043 gctgg----gatgacagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93616 14 + 190779 gctgg----gatgacagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000576v1 58158 13 + 106623 gct-g----gatgacagg i gorGor5.CYUI01000576v1 C 0 N 0 s nomLeu3.chr11 120876048 14 + 123690457 tctga----gatgacagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466826 14 + 204787373 gctgg----gatgacagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74067 14 + 192460366 gctgg----gatgacagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549877 14 + 19675229 gctgg----gatgacagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488961 14 + 16847902 gctgg----gatgacagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422731 14 - 91754291 gctgg----gatgacagg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581523 14 - 1977891 gctgg----gatgacagg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458642 14 + 7796314 gctgg----gatgacagg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940528 18 - 74750902 gctaggtgtgaggacagg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465258 14 + 17725628 gctgg----gatgacagg i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 429830 14 - 6778120 gcggg----gattgcagg i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29072074 11 + 31377067 GGTGG----AATGAC--- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896875 0 + 6579706 C a score=144132.000000 s hg38.chr3_KI270779v1_alt 129346 21 + 205312 catgagccaccgcgcccagcc s panTro5.chr3 200118503 21 + 202621043 cgtgagccaccgcgcccggcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93630 21 + 190779 cgtgagccaccgcgcccggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35787 21 - 55620 cgtgagccaccgcgcccggcc i gorGor5.CYUI01001831v1 N 0 C 0 s nomLeu3.chr11 120876062 21 + 123690457 cgtgagccaccgcgcccggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466840 21 + 204787373 cctgagccaccacgcccagcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74081 21 + 192460366 cctgagccaccacgcccagcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549891 20 + 19675229 cctgag-catcgcgcccagcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488975 21 + 16847902 cctgagccaccgcgctcagcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422745 21 - 91754291 catgagccaccgcgcccagcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581537 21 - 1977891 catgagccaccgcgcccagcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458656 21 + 7796314 cgtgagccaccgcgcctggcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940546 21 - 74750902 tgtgagccactgtgcccagcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465274 21 + 17725628 tgagaggtaccacgcccagcc i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 429844 21 - 6778120 catgagccacggcacctggcc i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29072085 2 + 31377067 --------------CT----- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e otoGar3.GL873829 419833 0 - 608964 C e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896875 0 + 6579706 C a score=92484.000000 s hg38.chr3_KI270779v1_alt 129367 12 + 205312 TTGAATCAGTTC s panTro5.chr3 200118524 12 + 202621043 TTGAATCAGTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93651 12 + 190779 TTGAATCAGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35808 12 - 55620 TTGAATCAGTTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876083 12 + 123690457 TTGAATCAGTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466861 12 + 204787373 TTGAATCAGTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74102 12 + 192460366 TTGAATCAGTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549911 11 + 19675229 TTGAATCAGTT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 488996 12 + 16847902 TTGAATCAGTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422766 12 - 91754291 TTGAATCAGTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581558 12 - 1977891 TTGAATCAGTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458677 12 + 7796314 TTGAATCAGTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940567 12 - 74750902 TTGAATCTGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465295 12 + 17725628 TTGAATCTGTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429865 1 - 6778120 T----------- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 419833 12 - 608964 TTGAGTAAACTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29072087 12 + 31377067 TTGAATCACTTG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7421698 11 + 22200726 I e micMur3.chr1 25906728 71 - 114275543 I e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896875 0 + 6579706 C a score=25994.000000 s hg38.chr3_KI270779v1_alt 129379 3 + 205312 TAT s panTro5.chr3 200118536 3 + 202621043 TGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93663 3 + 190779 TAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35820 3 - 55620 TGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876095 3 + 123690457 TGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466873 3 + 204787373 TAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74114 3 + 192460366 TAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549922 3 + 19675229 TAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489008 3 + 16847902 TAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422778 3 - 91754291 TAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581570 3 - 1977891 TAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458689 3 + 7796314 TAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940579 3 - 74750902 TAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465307 3 + 17725628 TGT i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7421709 3 + 22200726 TAT i proCoq1.NW_012133858v1 I 11 C 0 s otoGar3.GL873829 419845 3 - 608964 TAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29072099 3 + 31377067 CGC i canFam3.chr33 C 0 C 0 e micMur3.chr1 25906728 71 - 114275543 I e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896875 0 + 6579706 C e cebCap1.NW_016107444v1 429866 0 - 6778120 C a score=71967.000000 s hg38.chr3_KI270779v1_alt 129382 7 + 205312 GTGCCCA s panTro5.chr3 200118539 7 + 202621043 GTGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93666 7 + 190779 GTGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35823 7 - 55620 GTGCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876098 7 + 123690457 GTGTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466876 7 + 204787373 GTGCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74117 7 + 192460366 GTGCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549925 6 + 19675229 GTG-CCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489011 7 + 16847902 GTGCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422781 7 - 91754291 GTGCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581573 7 - 1977891 GTGCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458692 7 + 7796314 GTGCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940582 7 - 74750902 GTGCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465310 7 + 17725628 GTGCCCA i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25906799 7 - 114275543 GTGCTCA i micMur3.chr1 I 71 C 0 s proCoq1.NW_012133858v1 7421712 7 + 22200726 GGGCCCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 419848 7 - 608964 TTGCCCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29072102 6 + 31377067 GGGCCC- i canFam3.chr33 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e dasNov3.JH569502 3896875 0 + 6579706 C e cebCap1.NW_016107444v1 429866 0 - 6778120 C a score=596486.000000 s hg38.chr3_KI270779v1_alt 129389 54 + 205312 GAGTCACTCTAGCTATCTGGCCAAA-CCGCCGTAAGCCCGTCACTAC-TACTTACT s panTro5.chr3 200118546 54 + 202621043 GAGTCACTCTAGCTATCTGGCCAAA-CCGCCATAAGCCCGTCACTAC-TACTTACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93673 54 + 190779 GAGTCACTCTAGCTATCTGGCCAAA-CCGCCATAAGCCCGTCACTAC-TACTTACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35830 54 - 55620 GAGTCACTCTAGCTATCTGGCCAAA-CCGCCATAAGCCCGTCACTAC-TACTTACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876105 54 + 123690457 GAGTCACTGTAGCTATCTGGCCAAA-CCGCCATAAGCCCGTCACTAC-TACTTACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466883 54 + 204787373 CATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTAC-TACTTACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74124 54 + 192460366 CATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTAC-TACTTACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549931 53 + 19675229 GATTCACTCTACCTATCTGA-CAAA-TCACCATAAGCCTGTCACTAC-TACTTACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489018 54 + 16847902 GATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTAC-TACTTACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422788 54 - 91754291 GATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTAC-TACTTACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581580 54 - 1977891 GATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTAC-TACTTACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458699 54 + 7796314 GATTCACTCTAGCTATCTGACCAAA-TCACCATAAGCCTGTCACTAC-TGCTTACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940589 55 - 74750902 GAGTCACTCTACCTATCTGGCCAAATTCACCATAAGCCTGTCATTAC-TACTTACT i calJac3.chr17 C 0 I 332 s saiBol1.JH378146 465317 55 + 17725628 GAGTCACTCTAGCTATCTGGCCAAATTCACCATAAGCCCGTCATTAC-TACTTACT i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25906806 54 - 114275543 GAGTGAGTCTAGCTATGTGGCCAAA-TTGCCTTAAGCCTGTCATTAC-TATTCACC i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7421719 53 + 22200726 GAGTGAGTCTAGCTATCTGGCCAAA-TTGCCATAAGCCTGTCCTGAC-TATT-ACC i proCoq1.NW_012133858v1 C 0 I 1 s otoGar3.GL873829 419855 55 - 608964 AAGTGAGTCTAGCTGTCTGGCCAAA-TTGCCGTAAGCCTGTCGTTACTTATTTACC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29072108 54 + 31377067 GAGACAGCTTTGCTCGCTGGCCAGA-CTTCCAGAAGGCCATCGCTGC-TGTTCACT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896875 54 + 6579706 GAGTCAGTCTAACTAGCTGGCTGGA-TTGCCATAAACCTGTCACTAT-TATTCACT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e cebCap1.NW_016107444v1 429866 0 - 6778120 C a score=17652.000000 s hg38.chr3_KI270779v1_alt 129443 3 + 205312 GGG s panTro5.chr3 200118600 3 + 202621043 GGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93727 3 + 190779 GGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35884 3 - 55620 GGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876159 3 + 123690457 GGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466937 3 + 204787373 GGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74178 3 + 192460366 GGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549984 3 + 19675229 GGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489072 3 + 16847902 GGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422842 3 - 91754291 GGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581634 3 - 1977891 GGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458753 3 + 7796314 GGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940976 3 - 74750902 GGG i calJac3.chr17 I 332 C 0 s saiBol1.JH378146 465372 3 + 17725628 GGG i saiBol1.JH378146 C 0 I 315 s cebCap1.NW_016107444v1 429866 3 - 6778120 GGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906861 2 - 114275543 AG- i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 7421773 2 + 22200726 GG- i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 419911 2 - 608964 GG- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29072162 3 + 31377067 GGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896929 1 + 6579706 -G- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I a score=419265.000000 s hg38.chr3_KI270779v1_alt 129446 38 + 205312 GGGCACCTATTTGAGTTATAGATATCGCTCCTCGGAAA s panTro5.chr3 200118603 38 + 202621043 GGGCACCTATCTGAGTTATAGATATCGCTCCTCGGAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93730 38 + 190779 GGGCACCTATTTGAGTTATAGATATCGCTCCTCGGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35887 38 - 55620 GGGCACCTATTTGAGTTATAGATATCGCTCCTCAGAAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876162 38 + 123690457 GGGCACCTATTTGAGTTATAGGTATCGCTCCTCGGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466940 38 + 204787373 GGGCACCTATTTGAGTTATACGTATCGTTCCTCAGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74181 38 + 192460366 GGGCACCTATTTGAGTTATACGTATCGTTCCTCAGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 549987 36 + 19675229 GGGC-CCTATTTGAGTTATACGTAT-GTTCCTCAGAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489075 38 + 16847902 GGGCACCTATTTGAGTTATATGTATCGTTCCTCAGAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422845 38 - 91754291 GGGCACCTATTTGAGTTATATGTATCGTTCCTCAGAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581637 38 - 1977891 GGGCACCTATTTGAGTTATATGTATCGTTCCTCAGAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458756 37 + 7796314 AGGCA-CTATTTGAGTTATACGTATCATTCCTCAGAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 940979 38 - 74750902 GGGCACCTATTTGAGTTATAGGTATCATTCCAAAGAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465690 38 + 17725628 GGGCACCTATTTGAGTTATAGGTGTCGTTCCAAAGAAA i saiBol1.JH378146 I 315 C 0 s cebCap1.NW_016107444v1 429869 38 - 6778120 GGACACCTATTTGAGTTATAGGTATCGTTCCAAAGAAA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906863 38 - 114275543 GAGCACCTGTTTGAATTATCAGTGTCATTCCTAAGAGA i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7421775 38 + 22200726 GAGCACCTGTTTGAATTATCAGTGTCATTCCTAAGAGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 419913 10 - 608964 GGAAACCTGT---------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29072165 36 + 31377067 -GGCACCTATCTGAATCATAGGGATCATT-CTCGGAAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896930 38 + 6579706 GGGCACCTACTTGAAATACAGGTATCGTTCCTAAGAAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I a score=3654687.000000 s hg38.chr3_KI270779v1_alt 129484 284 + 205312 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTGTAGCAATGCAGAATTTCCC---AAA-TTTGACTCTGACCTCATCCCCTACCCACCTCCCCACTCTC---CCCAGCCAGCCAAATAGTCCTACCAAAGAGCTCCAAGTCGGTGCAGCTGTCTCTGAGCGTGAAGTTGGCATCCTCAGCATTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAATCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA s panTro5.chr3 200118641 284 + 202621043 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTGTAGCAATGCAGAATTTCCC---AAA-TTTGACTCTGACCTCATCCCCTACCCACCTCCCCGCTCTC---CCCAGCCAGCCAAATATTCCTACCAAAGAGCTCCAAGTCAGTGCAGCTGTCTCTGAGCGTGAAGTTGGCATCCTCGGCGTTGCTAGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGAACTGATCTGAAACACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 93768 284 + 190779 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTGTAGCAATGCAGAATTTCCC---AAA-TTTGACTCTGACCTCATCCCCTACCCACCTCCCCGCTCTC---CCCAGCCAGCCAAATATTCCTACCAAAGAGCTCCAAGTCAGTGCAGCTGTCTCTGAGCGTGAAGTTGGCATCCTCGGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGAACTGATCTGAAACACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 35925 284 - 55620 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTATAGCAATGCAGAATTTCCC---AAA-TTTGACTCTGACCTCATCCCCTACCCACCTCCCCGCTCTC---CCCAGCCAGCCAAATATTCCTACCAAAGAGCTCAAAGTCGGTACAGCTGTCTCTGAGTGTGAAGTTGGCATCCTCAGCATTGCTGGTGTACTGAATCAGCGTGGTCTGTCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876200 285 + 123690457 TGCCGGTCCTGGATATTCGAAT-----GAAAGATTGACAGCAAGTGTTGCTGGGTACAGCAGTGCAGAATTTCCC---AAAGTTTGACTCCGACCTCATCCCCTACCCACCTCCCCACTCTC---CTCAGCCAGCCAAATATTCTTACCAAAGAGCTTAAAGTCGGTACAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCTGCATTGCTGGTGTACTGAATCAGCGTGATCTGCCCCTTGTAGGCTTCAACCACATGACTACCATTGATGGAGGGTGGGTACTGATCTGAAACACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202466978 280 + 204787373 TGCTGGTCCTGGATATTCAAAT-----GAAAGAGTGATGGCAAGTTTTGCTGGGTATAGCGATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCAT-TCCTACCCACCTCCCCACTCTC---CCCA----GCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTCCAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACATGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74219 280 + 192460366 TGCTGGTCCTGGATATTCAAAT-----GAAAGAGTGATGGCAAGTTTTGCTGGGTATAGCGATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCAT-CCCTACCCACCTCCCCACTCTC---CCCA----GCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTCCAGTTGTCTCTAAGTGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACATGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550023 271 + 19675229 TGC-GGTCCTGGATATTC-AAT-----GAAAGAGTGACGGCAAG-TTTGCTGGGTATACGCATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCAT-CCCTA-CCACCTCCCCACTCTC---CCAG------CAAACATTCTTACCAAAGAGCTTAAAGTCAGTCCAGTTGT-TCTGAGCGTGAAGGTGGCATCCTCAGCATTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTA-GCTTCAACCACACAACCACCATTGATGGAGGGC-GGTACTGATCTGAAACACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489113 281 + 16847902 TGCCGGTCCTGGATGTTCAAAT-----GAAAGAGTGACAGCAAGTTTTGCTGGGTATAGCGATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCATCCCCTACCCACCTCCCCACTCTC---CCCA----GCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTACAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGTGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 422883 280 - 91754291 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACGGCAAGTTTTGCTGGGTATAGCAATGCAAAATTTCCC---GAAGTTTGACTCTGACCTCAT-CCCTACCCACCTCCCCACTCTC---CCCA----GCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTACAGCTGTCTCTGAGTGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAATCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581675 281 - 1977891 TGCCGGTCCTGGATGTTCAAAT-----GAAAGAGTGACAGCAAGTTTTGCTGGGTATAGCAATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCATCCCCTACCCACCTCCCCACTCTC---CCCA----GCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTACAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGTGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 458793 281 + 7796314 TGCCAGTCCTGGATATTCAAAT-----GAAAGAGTGACGGCAAGTTTTGCTGGGTTTAGCAATGCAAAATTTCCC---AAAGTTTGACTCTGACCTTATCTCCTACCCACCTCCACACTCTC---CCCA----GCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTACAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941017 280 - 74750902 TGCCAGTCCTGGATATTCAAAT-----GAGCAAGTGACAGGAAGTTTTGCTGGGTATAGCGATGCAGAA-ATCCC---AAAGTTTGATTCCGACCTCATTCCCTACCCACCTCCCCACTTTC---CCCA----GTCAAACATTCTTACCGAAGAGCTTCAAGTCAGTACAATTGTCTCTGAGCATGAAGGTGACATTCTCAGCATTGCTGGTGTACTGAATCAGCACGGTCTGCCCCTTGTAGGCTTCAACCACATGGCGACCCTCGATGGAGGGTGGGTACTGATCTGAAAGACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 465728 280 + 17725628 TGCCAGTCCTGGATATTCAAAT-----GAAAGAGTGACAGGAAGTTTTGCTGGGTATAGTGATGCAAAA-ATCCC---AAAGTCTGATTCTGACCTCATCCCCTACCCACCTCCCCACTTTC---CCCA----GTCAAACATTCTTACTGAAGAGCTTCAAGTCAGTACAATTGTCTCTGAGCATGAAGGTGACATCCTCAGCATTGCTGGTGTACTGAATCAGCACGGTCTGCCCCTTGTACGCTTCAACCACACGGCTGCCCTTGATGGAGGGTGGGTACTGATCTGAAACACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 429907 281 - 6778120 TGCCAGTCCTGGATATTCAAAT-----GAACGAGTGACAGGAAGTTTTGCTGGGTATAGCGATGCAAAATTTCCC---AAAGTTTGATTCTGACCTCATCCCCTACCTACCTCCCCACTTTC---CCCA----GTCAAACATTCTTACCGAAGAGCTTAAAGTCGGTACAATTGTCTCTGAGCATGAAGGTGACATCCTCAGCATTGCTGGTGTACTGAATCAGCACGGTCTGCCCCTTGTAGGCTTCAACCACAGGGCTACCCTCGATGGAGGGCGGGTACTGATCTGAAACACA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25906901 284 - 114275543 TGCCAGTCCTGGATATTCAAAT-----GAAAAAGTGACAGGAAGTTGTGCTGGGTATAGAAATGCAGAATTATCC---AAAGTTTGACTCTGACCTCATCCTCTACCCACTCCCCCCACCTCCCACCCA----GCCAAACATTTTTACCAAAGAGCTTAACATCAGCACAGTTGTTTCCAAGAGAGAATGTGACATCCTCAGCGTTGCTGGTGTACTGAAACAGCCTGGTCTGCCCTCGGTAGGCTTCAAGCACATGAGATCCATTAATAGTGGGTGGGTACTTATCTGAAACACA i micMur3.chr1 C 0 I 64 s proCoq1.NW_012133858v1 7421813 283 + 22200726 CGCCAGTCCTGGATATTCAAAT-----GAAAAAGGGACAGGAAATTGTGCTGGGTATAGAAATGCAGAATTACTC---CAAGTTTGACTCTGACCTCATCCTCTACCCACTCCCACCATCTCCCACCCA----GCCAAACA-TTTTACCAAAGAGCTTAACGTCAGTGCAGTGGTTTCCAAGAGAGAATGTGACATCCTCAGCGTTGCTGGTGTAGTGAAACAGCGTGGTATTCCCCCGATAGGCTTCAAGCACATGAGGACCATGGATAGAGGGCGGGTACTGATCTGAAACACA i proCoq1.NW_012133858v1 C 0 I 105 s otoGar3.GL873829 419923 278 - 608964 ------TCTTGGATATTCAAAT-----GAAAAAGTGGCAGAAAGTTGTGCTGGGTGTTGAGATGCAAAATGACCC---CAAGTTTGACTCTGATTTTGTCTCCTCCCCATCTCCCGCACTTCCCACCCA----GCCAAATATTTTTACCAAAAAGCTTAACATCATCAGGGTTGTTTTCGAGTGAGAACACGGCATCCTTATCGTCGCTGGTGTACTGGTACTGCACCGTCCACCCCTGGTAGGCTTCGATCACTTGAGAACCATGGATAGAGGGTGGGTACTGATCTGAAACACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65435939 265 - 98207768 TGTTGGTCTTGATTATTCAAATTAAAAAAAAAAGAGGCAGGGCACTGTACAGAATAAAGAGACGTAAGGCAGCCC---AAG--ATGACTC-------------------CTCCCATCCTATT---GCCA----GCCAAAGATTCATACCAAAGAGCTTAAAGCCACTACATTTCTTGGAGAGGCTGAGTGTGGCATCCTTAGAGTTGCTGGTGATCTCAGTGGTCACTGTCTGCCCCTTGTAGGCTTGAATCTTGCTGCTGCAGTTGATAGAGGGTGGGTACTGATCTGAAACAGA i mm10.chr16 I 1951 I 1 s canFam3.chr33 29072201 271 + 31377067 TGCTGGTCCTAGATATTCCGGT-----GGAAAAGTGACATGAAATTGCCCAGGGCGTGATAATGCAAAATTACCTTAAAAAGCTTGACTCTGAGCTCATCCCTT--CCACC--------------CGCA----CCCAAGGGCTCTTACCGAAGAGCTTGAAGTCACTATTGCTGTTCCTCAGAGTGAATGTGACGTGCTCAGGGTGGCTGGTGTACTGAACCAGCGTGGTCTGCCCCAGGTAGGCTTGCACCGCCTGTGGACCCTCGATCGACGGGGGGTACTCATCTGAAACACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3896968 242 + 6579706 TGCTGCCCCTGGATACTCAACT-----GTAAACCTGGCAGTAAGTT------GGCACAGGG-----------CAC---AGGGCTTGGCTCTCACTTTAT----------------------C---CCCA----GTCAAGCATTCTTACCAAAGAGTGTGAAGTCACTGGAGCGGTTTCTAAGGGTGAACATGATGTTCTCAGAGTCACTGGTATACTGGATCCACCTCGTCTGCCCTTTGTAGGCTTTGATCACATCCTGGCCCATGATAGAAGGTGGGTACTGATCTGAAACGTA i dasNov3.JH569502 C 0 C 0 a score=666997.000000 s hg38.chr3_KI270779v1_alt 129768 70 + 205312 AA-G---AGGGAATGGGGGTTCCGAGGCAGGACAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AACTCTAA s panTro5.chr3 200118925 70 + 202621043 GA-G---AGGGAACGGGGGTTCCGAGGCAGGACAGTCTCCCGCTTCATCAGCCTC--CTCTCTTTCTC---AACTCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94052 70 + 190779 GA-G---AGGGAACGGGGGTTCCGAGGCAGGACAGTCTCCCGCTTCATCAGCCTC--CTCTCTTTCTC---AACTCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36209 70 - 55620 AA-G---AGGGAATGAGGGTTCCGAGGCAGGACAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AACTCTAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876485 70 + 123690457 AA-G---AGGGAATGGGAGTTCCCAGGCAGGACAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AACTCTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467258 70 + 204787373 AA-G---AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AAATCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74499 70 + 192460366 AA-G---AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AAATCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550294 70 + 19675229 AACG---AGGGGATGGGGTTCCGGAGGGAGGGCAGT-TCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AAATCTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489394 70 + 16847902 AA-G---AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AACTCTAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423163 70 - 91754291 AA-G---AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AACTCTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 581956 70 - 1977891 AA-G---AGGGGATGGGGGTTCCGAGGGAGGGCAGTCGCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AACTCTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459074 69 + 7796314 AA-G---AGGGGATGGGG-TTCCGAAGGAGGGCAGTCTCCTGCTTTATCAGCCTC--CTCTCTTTCTC---AGCTCTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941297 70 - 74750902 AA-G---AGGGGATGGGGGTTCCGAGGTGGGACAGTCTCCTGCTTCATCAGCCTC--CTCTCCTTCTC---AACTACAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466008 70 + 17725628 AA-G---AGGGGATGGGGGTTCCAAGGCAGGACAGTCTCCTGCTTCATCAGCCTC--GTCTCTTTCTC---AGCTACAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430188 70 - 6778120 AA-G---AGGGGATGGGGGTTCCAAGGCAGGACAGTCCCCTGCTTCCTCAGCCTC--TTCTCTTTCTC---AGCTACAA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 420201 63 - 608964 ---G---AGGGGACAGGG--TCAGAAGCAGGATAGGCACCTGCCTGATCAGTCTCCTCTCTCTTTCTC---AAC----- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65436205 67 - 98207768 AA-GCACGGAGACTAGTTATTC----ACAGGGCGCTCTCCACTCTTCCC--TTTC--TGCTCTTTCCCCATGACTC--- i mm10.chr16 I 1 C 0 s canFam3.chr33 29072472 67 + 31377067 AA-C---AGGAGATTCGGGTTTGGGGGCAGGACACTCTCTTGCCTCATGGGCCTC--GTCTCTCTCTG------TCTAG i canFam3.chr33 C 0 I 8 s dasNov3.JH569502 3897210 67 + 6579706 AA-G---AGGAGAATCTGGGTCTGAGGCAGGACACT---CTGGCTTACTAGCCTC--CTCTCGTTCTC---CCATCCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422096 105 + 22200726 I e micMur3.chr1 25907185 64 - 114275543 I a score=957152.000000 s hg38.chr3_KI270779v1_alt 129838 97 + 205312 --TATGTGTGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA s panTro5.chr3 200118995 97 + 202621043 --TATGTGTGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94122 97 + 190779 --TATGTGTGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36279 97 - 55620 --TATGTGTGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-AACTGACGCACAGCAGGCTGGGACTGTA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876555 97 + 123690457 --TATGTGTGAGGCTTTCCCAGGACTGTGACCCATCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GAGTAACGCACAGCAGACGGGGACTGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467328 97 + 204787373 --TATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCCGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74569 97 + 192460366 --TATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCCGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550364 90 + 19675229 --TATGTGTGAGGCATCCC--AGGCTGTG-CCCACCTCT-GAAGAAGGAA-TATTCTGTGTA-CCGCTCT-C-GACTGACG-ACAGCAGGCTGGGACGTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489464 97 + 16847902 --TATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCCGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423233 97 - 91754291 --TATGTGTGAGGCATTCCCAGGATGGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582026 97 - 1977891 --CATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459143 97 + 7796314 --TACGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACACACAGCAGGCTGGGACCGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941367 98 - 74750902 --GATACGTGAGGCATTCCCAGGACTGGGACCCACCTCTGGAAGAAGGAACTATTCTGGGTACCTGCTCT-CAGACCGATGAACAGCAGGCTGGGACTGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466078 98 + 17725628 --TCTACGTGAGGCGTTCCCAGGACTGGGACCCAGCTCGGGAAGAAGGAACTATTCTGTGTACCTGCTCT-CAGACCGAAACACAGCAGGTTGGGACTGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430258 86 - 6778120 --TATATGTGAGGTGTTCCCAGGACTGGGACCCACCTCTGGAAGAAGGA------------GCCTGCTCT-CAGACCGAAGCACAGCAGCTTGGGACTGTG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25907249 56 - 114275543 --TATGAGTGAGGCATTCCCAGGATAGTGACCCAGCTCTGGA------------------------------------------AGCAGGTTGGGGCTGT- i micMur3.chr1 I 64 C 0 s otoGar3.GL873829 420264 56 - 608964 --TATGAATGAGGCATTCCCAGGTCTGTGAGCCACCTCTGGA------------------------------------------ATCTGGTTGGGATTGT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65436272 98 - 98207768 --TTCCTCCGAGTCCTTACCACGCCTGCGGCCGGCCTCTGGGAGCAGAACTCAGTCTTCCTCTGTGCTCTGC-AAATGGTGCCGAGCATGTTGGGTTTGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29072547 98 + 31377067 --TTTGTGGGAGGTGTTCTCAGGGCTAGGACCCACCTCTGGAAGCAGGAATTACTCCATGTACCTGCTTT-CAGATTTCTGTAGAGCAGGTGGGGGTTGAA i canFam3.chr33 I 8 C 0 s dasNov3.JH569502 3897277 100 + 6579706 TGGCTGCGTGTGGCATTCCCAGGATGGTGAACCGCTTCCAGAAGCAGGAATTATTCTGTGTACCTGCTTT-CATACCTATGCAGAGCAGATTTTGGTTGTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422096 105 + 22200726 I a score=497401.000000 s hg38.chr3_KI270779v1_alt 129935 33 + 205312 CTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCT s panTro5.chr3 200119092 33 + 202621043 CCGCCCACCTAGCCAAATCTTTAGC--CTCTTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94219 33 + 190779 CTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36376 33 - 55620 CTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876652 33 + 123690457 CTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467425 33 + 204787373 CTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74666 33 + 192460366 CTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550454 32 + 19675229 CTGCCCACCTAGCC-AATCTTTAGC--CTCTCTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489561 33 + 16847902 CTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423330 35 - 91754291 CTGCCCACCTAGCCAAATCTTTAGCCTCTCTCTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582123 33 - 1977891 CTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459240 33 + 7796314 CTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941465 34 - 74750902 CTGCCCACCTATCCAAATCTTCAGC-TCTCTTTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466176 34 + 17725628 CTGCCCACCTAGCCAAATTTTTAGT-TCTCCTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430344 34 - 6778120 CTGCCCACCTGTTCAAATCTTTAGT-TCTCTTTCT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25907305 33 - 114275543 CTGCTCACCTGGCCAAATCTTTAGC--CTCTTTCT i micMur3.chr1 C 0 I 17 s proCoq1.NW_012133858v1 7422201 33 + 22200726 CTGCCCACCCGGCCAAATCTTTATC--CTCTTTCT i proCoq1.NW_012133858v1 I 105 C 0 s otoGar3.GL873829 420320 33 - 608964 CTGGTCACCTGGCCAAATCTTTAGC--CTCTCTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65436370 31 - 98207768 CTGCCCACT--GTCTAACCTTTAGA--CTCCCTTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29072645 33 + 31377067 TTGCCCACCTGGCCAAATCCTTACC--CTCGCTTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897377 33 + 6579706 TTCCCCACCTGGCCAAATCTTTAGC--CTCTTTTT i dasNov3.JH569502 C 0 C 0 a score=26226.000000 s hg38.chr3_KI270779v1_alt 129968 2 + 205312 CT s panTro5.chr3 200119125 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94252 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36409 2 - 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876685 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467458 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74699 2 + 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550486 2 + 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489594 2 + 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423365 2 - 91754291 CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582156 2 - 1977891 CT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459273 2 + 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941499 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466210 2 + 17725628 GT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430378 2 - 6778120 CT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7422234 2 + 22200726 CT i proCoq1.NW_012133858v1 C 0 I 868 s otoGar3.GL873829 420353 2 - 608964 CT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65436401 1 - 98207768 -T i mm10.chr16 C 0 I 3 s canFam3.chr33 29072678 2 + 31377067 AT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897410 2 + 6579706 CT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25907338 17 - 114275543 I a score=172362.000000 s hg38.chr3_KI270779v1_alt 129970 23 + 205312 CCCCCCACCTCCTCAAAAAGAGC s panTro5.chr3 200119127 23 + 202621043 CCCCCCACCTCCTCAAAAAGAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94254 23 + 190779 CCCCCCACCTCCTCAAAAAGAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36411 23 - 55620 CCCCCCACCTCCTCAAAAAGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876687 21 + 123690457 CCCCCCACCTCCTC--AAAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467460 23 + 204787373 CCCCCAGCCTCCTCCAAAAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74701 23 + 192460366 CCCCCAGCCTCCTCAAAAAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550488 23 + 19675229 CCCCCAGCCTCCTCAAAAAGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489596 23 + 16847902 CCCCTAGTCTCCTCAAAAAGAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423367 23 - 91754291 CCCCCAGCCTCCTCAAAAAGAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582158 23 - 1977891 CCCCCAGCCTCCTCAAAAATAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459275 23 + 7796314 CCCCCAACCTCCTCAAAAAGAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941501 22 - 74750902 CCCCC-ACCTCCTCAAAAAGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466212 20 + 17725628 CCCAC-ACCTCCTCAAAA--AGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430380 22 - 6778120 CCCCC-ACCTCCTCAAAAAGAGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 420355 18 - 608964 -----CTTCTCCTCAAGCAGGCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65436405 21 - 98207768 TTCCTTTTCTTTTTGTATATA-- i mm10.chr16 I 3 C 0 s canFam3.chr33 29072680 20 + 31377067 ---CTTCCCTCCCCAGACAGGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897412 22 + 6579706 -CTACCTCTTCCTCAAACAGGGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907338 17 - 114275543 I a score=79913.000000 s hg38.chr3_KI270779v1_alt 129993 8 + 205312 T-CCTTTCA s panTro5.chr3 200119150 8 + 202621043 C-CCTTTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94277 8 + 190779 T-CCTTTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36434 9 - 55620 TGCCTTTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876708 8 + 123690457 T-CCTTTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467483 8 + 204787373 T-CCTTTCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74724 8 + 192460366 T-CCTTTCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550511 8 + 19675229 T-CCTTTCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489619 8 + 16847902 T-CCTTTCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423390 8 - 91754291 T-CCTTTCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582181 8 - 1977891 T-CCTTTCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459298 8 + 7796314 T-CCTTTTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941523 9 - 74750902 TTCCTTTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466232 9 + 17725628 TTCCTTTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430402 9 - 6778120 TTCCTTTCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25907355 8 - 114275543 T-CCTTTCA i micMur3.chr1 I 17 C 0 s otoGar3.GL873829 420373 8 - 608964 T-CCTTTCA i otoGar3.GL873829 C 0 I 97 s mm10.chr16 65436426 8 - 98207768 T-TCTTTTA i mm10.chr16 C 0 I 1 s canFam3.chr33 29072700 8 + 31377067 T-CAGGTCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897434 8 + 6579706 T-CATTTCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I a score=540149.000000 s hg38.chr3_KI270779v1_alt 130001 54 + 205312 GATTCTTTCCTGAAC-ACAGTGCTATGCT-GGG-TATGACAA----------------AAAGTGAATTAGAGA s panTro5.chr3 200119158 54 + 202621043 GATTCTTTCCTGAAC-ACAGTGCTATGCT-GGG-TATGACAA----------------AAAGTGAATTAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94285 54 + 190779 GATTCTTTCCTGAAC-ACAGTGCTATGCT-GGG-TATGACAA----------------AAAGTGAATTAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36443 54 - 55620 GATTCTCTCCTGAAT-ACAGTGCTATGCT-GGG-TATGACGA----------------AAAGTGAATTAGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876716 54 + 123690457 GATTCTTTCCTGAAC-ATGGTGCTATGCT-GGG-TATGACAA----------------AAAGTGAATTAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467491 54 + 204787373 GATTCTTTCCTGAAC-ATGGTGCTATGCT-GGG-TATGACAA----------------AAAGCGAATTCGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74732 54 + 192460366 GATTCTTTCCTGAAC-ATGGTGCTATGCT-GGG-TATGACAA----------------AAAGCGAATTCGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550519 53 + 19675229 GATTCTTTCCTGAAC-TTGGTGCTATGCT-GGGTTATGACAA----------------AAAGCGAATTC--GA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489627 54 + 16847902 GATTCTTTCCTGAAC-ATGGTGCTATGCT-GGG-TATGACAA----------------AAAGTGAATTAGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423398 54 - 91754291 GATTCTTTCCTGAAC-ATGGTGCTATGCT-GGG-TATGACAA----------------AAAGCGAATTAGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582189 54 - 1977891 GATTCTTTCCTGAAC-ATGGTGCTATGCT-GGG-TATGACAA----------------AAAGTGAATTAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459306 52 + 7796314 GATTCTTTCCTGAAC-ATGGTACTATGCT-GGG-TATGACAA----------------AAAGTGA--CAGAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941532 54 - 74750902 TATTCTTTCCTGAAC-ACAGTGCTATGCC-GGG-TGTGGCAA----------------AAAGTGAATTACAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466241 55 + 17725628 TAATCTTTCCTGAAC-ACAGTGCTGTGCTGGGG-TGTGACAA----------------AAAGTGAATTGCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430411 54 - 6778120 TAATCTTTCCTGAAC-ACACTGCTATGCT-GGG-TGTGACAA----------------AAAGTGAATTACAGA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25907363 54 - 114275543 AGCTCTTTCCTGAAA-AGAGTGCTATGCT-GGG-CATGGCAC----------------AAAGTGAGTCAGAGA i micMur3.chr1 C 0 I 766 s mm10.chr16 65436435 65 - 98207768 AATTA------GAACTGtatttttattgt-gtg-tacgtcaatgtttttgcttgtatgtacgtgtgtcggtgt i mm10.chr16 I 1 C 0 s canFam3.chr33 29072708 54 + 31377067 AGCTCTCTCCTGATC-AGAGCGCTCTGCT-GGG-CGTGGTAC----------------AAAGTGAATCAggaa i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897442 54 + 6579706 ACTTCTTTGCTGAAC-ACAGTGCTAGTCA-GGG-CATGGCAC----------------AAAGTGAATCAAAGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e otoGar3.GL873829 420381 97 - 608964 I a score=147186.000000 s hg38.chr3_KI270779v1_alt 130055 23 + 205312 GCAGATTTGTTTGGACCATTAC-A s panTro5.chr3 200119212 21 + 202621043 GCAGATTTGTTTAGACCATTA--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94339 23 + 190779 GCAGATTTGTTTAGACCATTAC-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36497 23 - 55620 GCAGATTTGTTTAGACCATTAC-A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876770 23 + 123690457 Gcagatctgtttagaccattac-a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467545 23 + 204787373 Gcagatttgtttagaccgttac-a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74786 23 + 192460366 Gcagatttgtttagaccattac-a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550572 21 + 19675229 GCAGATTTGTTTAG-CCGTTAC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489681 23 + 16847902 Gcagatttgtttagaccattac-a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423452 23 - 91754291 Gcagatttgtttagaccattac-a i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582243 23 - 1977891 Gcagatttgtttagaccattac-a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459358 23 + 7796314 Gcagatttgtttggaccattac-a i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941586 22 - 74750902 GCACGCTTgtttagatcatcac-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466296 20 + 17725628 GCA--attgtttagaccatcac-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 430465 23 - 6778120 Gcaggcttgtttagaccatcaca- i cebCap1.NW_016107444v1 C 0 I 581 s mm10.chr16 65436500 21 - 98207768 --gaaggtgttggatccattgc-a i mm10.chr16 C 0 C 0 s canFam3.chr33 29072762 17 + 31377067 ccagggttattcagacc------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897496 21 + 6579706 ACAGGGTTATTCAGATCATCA--- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I a score=253705.000000 s hg38.chr3_KI270779v1_alt 130078 61 + 205312 AAGGGTTGTACCCTTAGACCAAAGGGTTGTACCTTTGGCAAAGGGCTGAAAACCTGAAGGG s panTro5.chr3 200119233 42 + 202621043 -------------------CAAAGGGTTGTACCTTTGGCAAAGGGCTGAAAACCTGAAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94362 61 + 190779 AAGGGTTGTACCCTTAGACCAAAGGGTTGTACCTTTGGCAAAGGGCTGAAAACCTGAAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36520 41 - 55620 --------------------AAGGGGTTGTACCTTTGGCAAAGGGCTGAAAACCTGAAGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876793 38 + 123690457 -----------------------gggttgtacctttggcaaagggctgaaaacctgaaggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467568 38 + 204787373 -----------------------gagttgtacctttggcaaagggctgaaaacctgaaggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74809 38 + 192460366 -----------------------gagttgtaccttcggcaaagggctgaaaacctgaaggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550593 38 + 19675229 -----------------------GAGTTGTACCTTCGGCAAAGGCTTGAAAACCTGAAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489704 38 + 16847902 -----------------------gagttgtaccttcggcaaagggctgaaaacctgaaggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423475 38 - 91754291 -----------------------gagttgtacctttggcaaaggactgaaaacctgaaggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582266 38 - 1977891 -----------------------gagttgtaccttcggcaaagggctgaaaacctgaaggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459381 38 + 7796314 -----------------------gagttgtacctttggcaaagggctgaaaacctgaaggg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 941608 39 - 74750902 ----------------------agagttgtgcctttggcaaagggctgaaaacctggaggg i calJac3.chr17 C 0 I 452 s saiBol1.JH378146 466316 39 + 17725628 ----------------------agagctgtgcctttggcaaagggctgagagcctggcggg i saiBol1.JH378146 C 0 I 453 s mm10.chr16 65436521 36 - 98207768 -------------------actggagttaaagat--ggttgtgagctg----ccatgtggg i mm10.chr16 C 0 C 0 s canFam3.chr33 29072779 26 + 31377067 -----------------atcacagagttttgcccttggaagag------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897517 29 + 6579706 --------------------------------GCTTGGAAGATGGCTGAAGACCATGAGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I a score=8281.000000 s hg38.chr3_KI270779v1_alt 130139 1 + 205312 T s panTro5.chr3 200119275 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94423 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36561 1 - 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876831 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467606 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74847 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550631 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489742 1 + 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423513 1 - 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582304 1 - 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459419 1 + 7796314 t i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 65436557 1 - 98207768 t i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3897546 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e canFam3.chr33 29072805 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=43569.000000 s hg38.chr3_KI270779v1_alt 130140 12 + 205312 GCTG-----ggtgtctc s panTro5.chr3 200119276 12 + 202621043 GCTG-----ggtgtctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94424 12 + 190779 GCTG-----ggtgtctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36562 12 - 55620 GCTG-----ggtgtctc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876832 12 + 123690457 gctg-----ggtgtctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467607 17 + 204787373 gccgggcgtggtgtctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74848 17 + 192460366 gccgggcgtggtgtctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550632 14 + 19675229 GC---gcgtggtgtctc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489743 17 + 16847902 gccgggcgtggtgtctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423514 17 - 91754291 gccgggcgtggtatctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582305 17 - 1977891 gccgggcgtggtgtctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459420 17 + 7796314 gccgggcgtggtgtctc i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 65436558 11 - 98207768 gctagaaactg------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29072805 13 + 31377067 ----ggctaggagccac i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e dasNov3.JH569502 3897547 0 + 6579706 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=185293.000000 s hg38.chr3_KI270779v1_alt 130152 31 + 205312 atgtctgtaatcccagc-actttgggaggccg s panTro5.chr3 200119288 31 + 202621043 atgtctgtaatcccagc-actttgggaggccg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94436 31 + 190779 atgtctgtaatcccagc-actttgggaggccg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36574 31 - 55620 atgtctgtcatcccagc-actttgggaggccg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876844 31 + 123690457 atgcctgtaatcccagc-actttgggagaccg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467624 31 + 204787373 atgcctgtaatcccagc-actttgggaggccg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 74865 31 + 192460366 atgcctgtaatcccagc-actttgggaggccg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550646 32 + 19675229 atgcctgtaatcccagcaactttgggaggccg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 489760 31 + 16847902 atgcctgtaatcccagc-actttgggaggccg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423531 31 - 91754291 atgcctgtaatcccagc-actttgggaggccg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582322 31 - 1977891 acgcctataatcccagc-actttgggaggccg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459437 31 + 7796314 acgcctgtaatcccagc-actttgggaggctg i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 65436569 23 - 98207768 --------aacccaggt-cctctggaagaacg i mm10.chr16 C 0 I 105 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e dasNov3.JH569502 3897547 0 + 6579706 C e canFam3.chr33 29072818 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=1252624.000000 s hg38.chr3_KI270779v1_alt 130183 231 + 205312 aggccggtggataacc-tgaggtcaggagttcg-cgaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggcgggtgcctgtaatctcagctattcaggaggctgaaacagaagaatcgcttgaacccgggaagcagaggttgcgacgagccgagatcacgtcactgcactccagcctgggcaacaagagcgaaactccgtc s panTro5.chr3 200119319 231 + 202621043 aggccggtggataacc-tgaggtcgggagttcg-cgaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggaggatgcctgtaatctcagctactcaggaggctgaaacagaagaatcgcttgaacccgggaggcagaggttgcgatgagccgagatcacatcactgcactccagcctgggcaacaagagcgaaactccatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94467 231 + 190779 aggccggtggataacc-tgaggtcgggagttcg-cgaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggagggtgcctgtaatctcagctactcaggaggctgaaacagaagaatcgcttgaacccgggaggcagaggttgcgatgagccgagatcacatcactgcactccagcctgggcaacaagagcgaaactccatc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36605 231 - 55620 aggacggtggatcacc-tgcggtcaggagttcg-tgaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggcgggtgcctgtaatctcagctactcaggagggtgaaacagaagaatcgcttgaacccgggaggcagaggttgtgatgagccgagatcacatcactgcactccagcctgggcaacaagagcaaaactccgtc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120876875 231 + 123690457 aggccggcggatcacc-tgaggttgggagttcg-agcccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggcgggtgcctgtaatctcagctactcaggaggctgaagcaggagaatcgcttgaacccaggaggcagaggttgtgatgagccgagattgcaccattgcactccagcctgggcaacaagagcgaaactccatc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467655 232 + 204787373 aggccggcagatcacc-tgaggtcgggagttca-agaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagtcaggcgtagtgacgggcacctgtaatcccagctactcaggaggctgaagcaggagaatagcttgaacccgggaggcagaggttgccgtgagccgagatcacgccattgcactccagcctgggcaacaagagtgaaactccatc i rheMac8.chr2 C 0 I 31 s macFas5.chr2 74896 231 + 192460366 aggccggcagatcacc-tgaggtcgggagttca-agaccagcctgaccaacatggtgaaaccccgtctctactaaaaatgc-aaaattagtcaggcgtagtgacaggcacctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaacccgggaggcagaggttgccgtgagccgagatcacgccattgcactccagcctgggcaacaagagtgaaactccatc i macFas5.chr2 C 0 I 31 s macNem1.NW_012014355v1 550678 233 + 19675229 agggt-gcagatcaccttgaggtcggtgattcagagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagtcaggcgtagtgacaggcacctgtaatcccagctactcaggaggctgaagcaggagaatagcttgaacccggagggcagaggttgccgtgagccgggatcacgccactgcactccagcctgggcaataagagtgaaactccatc i macNem1.NW_012014355v1 C 0 I 26 s cerAty1.NW_012004056v1 489791 231 + 16847902 aggccggcagatcacc-tgaggtcgggagttca-agaccagcctgaccaacatggtgaaaccccgtctctactaaaaatgc-aaaattagtcaggcgtagtgacgggcacctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaacccgggaggcagaggttgccgtgagccgagatcacgccactgcactccagcctgggcaacaagagtgaaactccatc i cerAty1.NW_012004056v1 C 0 I 31 s chlSab2.chr15 423562 227 - 91754291 aggccagcagatcacc-tgaggtcgggagttca-agaccaggctgaccaacatggtgaaactctgtctctactaaaaatgc-aaaatt----aggcatggtgacgggcacctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaactcgggaggcagaggttgccgtgagctgagatcatgccactgcactccagcctgggcaacaagagtgaaaccccgtc i chlSab2.chr15 C 0 I 32 s manLeu1.NW_012102020v1 582353 231 - 1977891 aggccggcagatcacc-tgaggtcgggagttca-agaccagcctgaccaacatggtgaaaccctgtctctactaaaaatgc-aaaattagtcaggcatggtgatgggcacctgtaatcccagctactcaggaggctgaagcaagagaatcacttgaacccaggaggcagaggttgccgtgagccgagatcatgccactgcactccagcctgggcaacaagagtgaaactccatc i manLeu1.NW_012102020v1 C 0 I 32 s colAng1.NW_012118932v1 459468 231 + 7796314 aggccggcagatcacc-tgaggtcgggagttca-agaccagcctgaccaacatggtgaaaccctgtctctactaaaaatgc-aaaattagtcaggcatggtgacgggcacctgtaatcccagctactcaggaggctgaagcaggagaatggcttgaacccaggaggcagaggttgcggtgagccaagatcacgccactgcactccagcctgggcaacaagagtgaaactctgtc i colAng1.NW_012118932v1 C 0 I 22 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e mm10.chr16 65436592 105 - 98207768 I e dasNov3.JH569502 3897547 0 + 6579706 C e canFam3.chr33 29072818 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=1226.000000 s hg38.chr3_KI270779v1_alt 130414 12 + 205312 Aa--------------------------------cacacacaca s panTro5.chr3 200119550 44 + 202621043 AAAacacacacacacacacacgcacgcacacacgcacacacaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94698 40 + 190779 AA----Aacacacacacacacgcacgcacacacgcacacacaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36836 25 - 55620 AA----Aacacacacac---------------cacacacacacg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877106 25 + 123690457 aa----aaaacaaaaaa---------------aaaacaaaataa i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e mm10.chr16 65436592 105 - 98207768 I e dasNov3.JH569502 3897547 0 + 6579706 C e canFam3.chr33 29072818 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 550911 26 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 459699 22 + 7796314 I e manLeu1.NW_012102020v1 582584 32 - 1977891 I e chlSab2.chr15 423789 32 - 91754291 I e cerAty1.NW_012004056v1 490022 31 + 16847902 I e macFas5.chr2 75127 31 + 192460366 I e rheMac8.chr2 202467887 31 + 204787373 I a score=-156.000000 s hg38.chr3_KI270779v1_alt 130426 3 + 205312 -cac s panTro5.chr3 200119594 3 + 202621043 -cac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94738 3 + 190779 -cac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36861 3 - 55620 -cac i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877131 3 + 123690457 -aac i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 550937 3 + 19675229 aaa- i macNem1.NW_012014355v1 I 26 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e mm10.chr16 65436592 105 - 98207768 I e dasNov3.JH569502 3897547 0 + 6579706 C e canFam3.chr33 29072818 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 459699 22 + 7796314 I e manLeu1.NW_012102020v1 582584 32 - 1977891 I e chlSab2.chr15 423789 32 - 91754291 I e cerAty1.NW_012004056v1 490022 31 + 16847902 I e macFas5.chr2 75127 31 + 192460366 I e rheMac8.chr2 202467887 31 + 204787373 I a score=10239.000000 s hg38.chr3_KI270779v1_alt 130429 6 + 205312 acgcac s panTro5.chr3 200119597 6 + 202621043 atgcac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94741 6 + 190779 atgcac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36864 6 - 55620 acgcac i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877134 6 + 123690457 aaaacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467918 6 + 204787373 acgaaa i rheMac8.chr2 I 31 C 0 s macFas5.chr2 75158 6 + 192460366 acgaaa i macFas5.chr2 I 31 C 0 s macNem1.NW_012014355v1 550940 6 + 19675229 aCGAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490053 6 + 16847902 acgaaa i cerAty1.NW_012004056v1 I 31 C 0 s chlSab2.chr15 423821 6 - 91754291 aagaaa i chlSab2.chr15 I 32 C 0 s manLeu1.NW_012102020v1 582616 6 - 1977891 aagaaa i manLeu1.NW_012102020v1 I 32 C 0 s colAng1.NW_012118932v1 459721 6 + 7796314 aagaaa i colAng1.NW_012118932v1 I 22 C 0 s mm10.chr16 65436697 6 - 98207768 aagctg i mm10.chr16 I 105 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 420381 97 - 608964 I e dasNov3.JH569502 3897547 0 + 6579706 C e canFam3.chr33 29072818 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=61542.000000 s hg38.chr3_KI270779v1_alt 130435 8 + 205312 aAAACCTG s panTro5.chr3 200119603 8 + 202621043 aAAACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 94747 8 + 190779 aAAACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36870 8 - 55620 aAAACCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877140 8 + 123690457 aaaacatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467924 8 + 204787373 aaaacctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75164 8 + 192460366 aaaacctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550946 8 + 19675229 AAAACCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490059 8 + 16847902 aaaacctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423827 8 - 91754291 AAAAcctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582622 8 - 1977891 aaaacctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459727 8 + 7796314 aaaacctg i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 420478 8 - 608964 aaaacctt i otoGar3.GL873829 I 97 C 0 s mm10.chr16 65436703 8 - 98207768 aaacccat i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3897547 8 + 6579706 AAGACCTA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e canFam3.chr33 29072818 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=2389798.000000 s hg38.chr3_KI270779v1_alt 130443 349 + 205312 GAgggtcacatctaaagggacattgcatttgtccagaaatagagagggagtgaaacctcttcacggg--tctgtttctcggagccctgccatttccatttcatagtTGCTTCACACATTCATTCAGtcagtcatttaacaaacatttattgag--------------c------taagtggctggcactgttctgggtggtgaggatacagtcatgaat---------------------------------------------------gaataatt-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacatgaagtgtgggt----------------------gaatgtgaca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----aggcctcaccaaggagg s panTro5.chr3 200119611 349 + 202621043 GAgggtcacatctaaacggacattgcttttgtccagaaatagagagggagtgaaacctcttcacggg--tctgtttctcggagccctgccatttccatttcatagtTGCTTCACGCATTCATTCAGtcagtcatttaacaaacatttattgag--------------c------taagtggctggcactgttctgggtggtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacacgaagtgtgggt----------------------gaatgtgaca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----aggcctcactgaggagg i panTro5.chr3 C 0 I 1 s panPan2.chrUn_NW_014024201v1 94755 348 + 190779 GAgggtcacatctaaacggacattgcttttgtccagaaatagagagggagtgaaacctcttcacggg--tctgtttctcggagccctgccatttccatttcatagtTGCTTCACGCATTCATTCAGtcagtcatttaacaaacatttattgag--------------c------taagtggctggcactgttctgggtggtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggag-aaaaaataaagcagggaaggc------------------------------aaacacgaagtgtgggt----------------------gaatgtgaca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----aggcctcactgaggagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 36878 349 - 55620 GAgggtcacatctaaacggacattgcatttgtccagaaatagagagggagtggaacctcttcacggg--tctgtttctcggagccctgccatttccatttcatagtTGCTTCACGCATTCGTTCAGtcagtcatttaacaaacatttattgag--------------c------taagtggctggcactgttctgggtggtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacacgaagtgtgggt----------------------gaatgtgaca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----aggcctcaccgaggagg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877148 345 + 123690457 gaggatcacatctaaacggatattgcatttgtccagaaatagagagggagtgaaacctctccacggg--tctgtttctcggagccctgccatttccatttcatagtTGCGTCACGCATTCATTCAGtcagtcatttaacaaatatttattgag--------------c------taagtggctggcactgttctgggtgatgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaa----aaggcagggaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgaca---------------------ttttggacagggt-------------------------------ggccaa--------------gaa----aggcattgccaaggagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202467932 349 + 204787373 gagagtcacatcgaaacgcacatcacatttgtccagaaatagagagggagtgaaaccttttcacggg--gctgtttctcggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAATCTGtcatttaacaaatatttattgag--------------c------taagtggctggcattgctctgggtagtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----agcccttgctgaggagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75172 347 + 192460366 gagagtcacatcgaaacgcacatcacatttgtccagaaatagagagggagtgaaaccttttcacggg--gctgtttctcggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAATCTGtcatttaacaaatatttattgag--------------c------taagtggctggcattgctctgggtagtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaa--atg-------ttgagtaattataaatgctaaggagaaaaaaataaagaaggaaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----agccctcgctgaggagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 550954 346 + 19675229 GAGAGTCACATCGAAACGCAcatcacatttgtccagaaatagagagggagtgaaaccttttcacggg--gctgtttctcagagccctgccatttccatttcatAGTTGGTTCACACATCCATtcaatctgtcatttaacaaatatttattgag--------------c------taagtggctggcattgctctgggtagtgaggatacagtcatgaat---------------------------------------------------gaataat----aaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----agcccttgctgaggagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490067 349 + 16847902 gagagtcacatcgaaacgcacatcacatttgtccagaaatagacagggagtgaaaccttttcacggg--gctgtttctcggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAATCTAtcatttaacaaatatttattgag--------------c------taagtggctggcattgctctgggtagtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagtgaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----agccctcgctgaggagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 423835 349 - 91754291 gagggtcacatctaaacggacatcacatttgtccagaaatagagagggagtgaaaccttttcactgg--tctgtttcttggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAGtcagtcatttaacaaatatttattgag--------------c------taagtggctggcattgctctgggtagtaaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ttttagacagggc-------------------------------agccca--------------gag----agccctcactgaggagg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582630 349 - 1977891 gagggtcacatcgaaatgcacatcacatttgtccagaaagagagagggagtgaaaccttttcacagg--tctgtttctcggagccctgccatttccatttcatagtTGGTTCACACATCCATTCAATCTGtcatttaacaaatatttattggg--------------c------taagtggctggcattgctctgggtagtgaggatacagtcatgaat---------------------------------------------------taataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ttttagacagggc-------------------------------ggccaa--------------gag----agccctcgctgaggagg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 459735 349 + 7796314 gagggtcacatctaaacggacatcgcatttgtccagaaacagagagggagtgaaaccttttcacggg--actgtttctcggagccctgccatttccatttcatAGTTGGTTCGCGCATTCATTCAGtcagtcatttaacaaatatttattgag--------------c------taagtggctggcattgctctgggtagtgaggatacagtcatgaat---------------------------------------------------gaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggc------------------------------aaacaggaagtgtgggt----------------------gaatgtgcca---------------------ctttagacagggc-------------------------------ggccaa--------------gag----agccctcgctgaggagg i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 420486 460 - 608964 gacagtaatgtccggatagatagcacagtagtctggaaacagagagggggtaagaccttttcacgggtctctgtttctaggagccctgctatttccttatcattgcTTGTTCat------------tcagccatttaatgagtatttattgagcacct--------ac------tatctagctggcgctgttctaggtaatgaggatgtggcaatggac---------------------------------------------------aaataac--aaaaagatacttatgaaaattataaaatata-------ttaagtagttaaaaatgctaaggagaaaaag--aaagcagggaagtcataacttctgtggctgtctttgaaaaagaaaaaaaggcagagaaggtataactgagagaggcacgctgagaagggggcactggaatagctacctttcagtttttggccggggctgggtttgaacccgccacctccggcatatggggccagcgccctacccttttgagccacaggcactgccagg---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65436711 301 - 98207768 gagtgtggtatgtagatggacattccatcttcccagaaagagag-----gtcaagctctctcaaagc--tccgtatcttggaagcctattatttccatcccattgcatattaaTAAGTTTCATCAAT--------------AGATGTATTGAG--------------CATGTGATATACAGATGGCCCTAATCT-----------CTATAGCAATGAAC---------------------------------------------------AAGTGATAGAAAAAGAGGCTTAAGGGAATTATAAATTATAAGATGCTCTTACTAGTTAGAAATGCTAA-----AAAAAAAAAATCAGGAAAGGG--------------------------------------GGTGTGAAT----------------------AAACGTGAAA---------------------TAAAAGACATGGC-------------------------------AGTCTG--------------G----------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29072818 317 + 31377067 gagggtgatctccagatgggcattgcatttgccaggaaatagaggAA--------------CACGGT--------------GGACATGCAATTTCCATTTCCCTGTT--------CAGTCATTCGGtcagtcgctgaac--acacgcactgagcgcct--------ac------cgtatggctggtagggctctaggtagtgaggacacagcagtaaac----------------------------------------------------agtactg-agaaggatacctatggaaactaggaaatatg-------ctagatagttataaatgctgaggagaaaaaaacaaagcagggacggc------------------------------aaataggaagtatgggt----------------------aaatgtgaga----------------------tttgggcaggcc-------------------------------ggccaa--------------gaa----gggcattgcggaggagg i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3897555 370 + 6579706 --------------GACGGGCACTGAATTT-----------GACAGGAACTTAAGTCTTTTCACTGGTCTCTCTGTTTTGGAACCTTGCTATTCCCTTTTCCTTGTT--------TGTTCATTCattcagtcttttgacaaattcttactgagcacctactatatcac------taagtg------actgttctaggtagtgaggacacaccaatgaacaaaacagaaaaaaatctctgctcttgtggagcttatagttttgtaggggaaaaagaata-agacagataggtatgaaaattataaaatgtt-------------agttgtaaatgctaaggag-aaaaaacaaagcaggggcggt------------------------------gaataggaagtgtaagt----------------------gggtatgaaa---------------------ttttggatagggt-------------------------------agccaa--------------gaa----aggcctcactgagaagg i dasNov3.JH569502 C 0 I 460 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=770094.000000 s hg38.chr3_KI270779v1_alt 130792 151 + 205312 ggac---attggaatgaagacgtaaagaaggtgaggg-gcaagcgtgtggctgtccagggaagg-aagggtattccaggcaagagaacagcacgtgtgaagcctgg-gagctgagcgca----cctagcgtgtttgaagaacacagaggagcctgcggggc s panPan2.chrUn_NW_014024201v1 95103 151 + 190779 ggac---attggaatgaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagcgaagg-aagggtattccaggcaagagaacagcatgtgtgaagcctgg-gagctgagcgca----cctagcgtgtttgaagaacacagaggagcctgcggggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 37227 151 - 55620 cgac---attggaatgaagacgtaaaggaggtgaggg-gcaagtgtgtggctgtccagggaagg-aagggtattccaggcaagagaacagcacgtgtgaagcctgg-gagctgagcgca----cctagcgtgtttgaagaacacagaggagcctgcggggc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877493 151 + 123690457 ggac---attggaatgaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagggaatg-aagggtattccaggcaagagaacagcacgtgtgaagcctgg-gagctgagcaca----cctggtgtgtctgaagaacacagaggagcctacagggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468281 154 + 204787373 gga----attggaataaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagggaaggaaaaggcattc-aggcaagagaacagcacgtgtgaagcctgg-gagctgagcgcacatgcctggtgtgtttgaggaacacagaggagcctgcggggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75519 153 + 192460366 gga----actggaataaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagggaagg-aaaggcattc-aggcaagagaacagcatgtgtgaagcctgg-gagctgagcgcacatgcctggtgtgtttgaggaacacagaggagcctgcggggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551300 153 + 19675229 gga----attggaataaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagggaagg-aaaggcattc-aggcaagagaacagcacgtgtgaagcctgg-gagctgagcgcacatgcctggtgtgtttgaggaacacagaggagcctgcggggc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490416 153 + 16847902 gga----attggaataaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagggaagg-aaaggcatcc-aggcaagagaacagcacgtgtgaagcctgg-gagctgagcgcacatgcctggtgtgtttggggaacacagaggaccctgcggggc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424184 155 - 91754291 ggac---attggaataaagacataaaggaggtgaggg-gcaagcgtgttgctgtccagggaagg-aaaggcattctaggcaagagaacagcacgtgtgaagcctgg-gagctgagcgcgcatgcctggtgtgtttgaggaacacagaggagcctgccgggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 582979 152 - 1977891 gga----attggaataaagacataaaggaggtgaggg-gcaagcgtgtggctgtccagggaagg-aaaggcattc-aggcaagagaacagcac-tgtgaagcctgg-gagctgagcgcatatgcctggtgtgtttgaggaacacagaggagcctgcggggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460084 154 + 7796314 ggac---attggaataaaggcataaaggaggtgaggg-gcaagcgtgtggctgtccagggaagg-gaa-gcattctaggtgagagaacagcatgtgtgaggcctgg-gagctgagcgcgcatgcctggtgtgtttgaggaacacagaggagcctgcggggc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 420946 150 - 608964 gcac---actggaataaaggcaaggaggaggtgagggagcaagcatgtgactgcccgggg---g-acgggcgctccagggaggggagcagcatgtgtgaagtcttg-gagttgaggatg---agccggggcgtttggaaaacacacagaagcccatagggc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437012 103 - 98207768 ------------------GGGCTTAAGAAGGC-AGTG-ACCTGCCTGTGGCTGGCTGTGGAGAG-A---GCCTT----GTAAGAGAAAGGCACATGCAGAGTT--------------------TCCAGTG---------AGCCCAAAGAAGCCAGTGGAG- i mm10.chr16 C 0 C 0 s canFam3.chr33 29073135 149 + 31377067 cgactctgcttgcacgcagccttggaggaggagaggg--tgagcctggggctgcctgg---agg-aagggtgtc--agggcagagagggccatggatggagcctggagtgaggagcgag----cccgctgtggttggtgaacacggagaagccaggagggc i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e dasNov3.JH569502 3897925 460 + 6579706 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e panTro5.chr3 200119960 1 + 202621043 I a score=48776.000000 s hg38.chr3_KI270779v1_alt 130943 5 + 205312 tggag s panTro5.chr3 200119961 5 + 202621043 TGGAG i panTro5.chr3 I 1 C 0 s panPan2.chrUn_NW_014024201v1 95254 5 + 190779 tggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 37378 5 - 55620 tggag i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877644 5 + 123690457 tggag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468435 5 + 204787373 tggag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75672 5 + 192460366 tggag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551453 5 + 19675229 tggag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490569 5 + 16847902 tggag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424339 5 - 91754291 tagag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 583131 5 - 1977891 tggag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460238 5 + 7796314 tggag i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 421096 5 - 608964 tggag i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437115 5 - 98207768 TGGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29073284 5 + 31377067 tggag i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e dasNov3.JH569502 3897925 460 + 6579706 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=119347.000000 s hg38.chr3_KI270779v1_alt 130948 19 + 205312 tgcagggagctgggaaggg s panTro5.chr3 200119966 19 + 202621043 TGGAGGGGGCTGGGAAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95259 19 + 190779 tgcagggagctgggaaggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 37383 19 - 55620 tgcagggagctgggaagGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877649 19 + 123690457 tgtagggagctgggaaggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468440 19 + 204787373 tggagggaggtgggaaggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75677 19 + 192460366 tggagggaggtgggaaggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551458 19 + 19675229 tggagggaggtgggaaggg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490574 19 + 16847902 tggagggaggtgggaaggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424344 19 - 91754291 tggagggagctgggaaggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 583136 19 - 1977891 tggagggaggtgggaaggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460243 19 + 7796314 tggagggagctgggaaggg i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 65437120 17 - 98207768 --GGAGGGGAGGAGAAGGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29073289 19 + 31377067 tggagggagcagggcaggg i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421101 0 - 608964 C e dasNov3.JH569502 3897925 460 + 6579706 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I a score=49704.000000 s hg38.chr3_KI270779v1_alt 130967 14 + 205312 gtccagcgctagga s panTro5.chr3 200119985 14 + 202621043 GTCCAGCACTAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95278 14 + 190779 gtccagcgctagga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 37402 14 - 55620 GTCCAGCGCCAGGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877668 14 + 123690457 gTCCAACACCAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468459 14 + 204787373 gtccagcagtagga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75696 14 + 192460366 gtccagcagtagga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551477 14 + 19675229 gtccagcagtagga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490593 14 + 16847902 gtccagcagtagga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424363 14 - 91754291 gtCCAGCACTAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 583155 14 - 1977891 gtccagcactagga i manLeu1.NW_012102020v1 C 0 I 10166 s mm10.chr16 65437137 8 - 98207768 ----GGTAGTGG-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29073308 3 + 31377067 ----------aga- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421101 0 - 608964 C e dasNov3.JH569502 3897925 460 + 6579706 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C a score=97032.000000 s hg38.chr3_KI270779v1_alt 130981 23 + 205312 tggagtggaggggGCTGGGAAGG s panTro5.chr3 200119999 23 + 202621043 TGGAGTGGAGGGGGCTGGGAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95292 23 + 190779 TGGAGTGGAGGGGGCTGGGAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 37416 23 - 55620 TGGAGTGGAGGGGGCTGGGAAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877682 23 + 123690457 TGGAGTGCAGGGAGCTGGGAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468473 23 + 204787373 tggagtgcagggagctgggaagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75710 23 + 192460366 tggagtgcagggagctgggaagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551491 23 + 19675229 tggagtgcagggagctgggaagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490607 23 + 16847902 tggagtggagggaggtaggaagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424377 23 - 91754291 TGGAGTGGAGGGAGCTGGGAAAG i chlSab2.chr15 C 0 C 0 s mm10.chr16 65437145 23 - 98207768 CAGAGTGCATAGGGCAGTGAAGG i mm10.chr16 C 0 I 35 s canFam3.chr33 29073311 21 + 31377067 -aggagagggagagttggagag- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421101 0 - 608964 C e dasNov3.JH569502 3897925 460 + 6579706 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I a score=33180.000000 s hg38.chr3_KI270779v1_alt 131004 15 + 205312 CATCCAGCGCTAGGA s panTro5.chr3 200120022 15 + 202621043 CGTCCAGCGCTAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95315 1 + 190779 C-------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 37439 15 - 55620 CGTCCAGCGCCAGGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877705 15 + 123690457 GGTCCAGCACTAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468496 15 + 204787373 ggtccagCACTAGGA i rheMac8.chr2 C 0 I 46 s macFas5.chr2 75733 15 + 192460366 ggtcCAGCACTAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551514 15 + 19675229 ggtccagCACTAGGA i macNem1.NW_012014355v1 C 0 I 48 s cerAty1.NW_012004056v1 490630 15 + 16847902 ggtccagCACTAGGA i cerAty1.NW_012004056v1 C 0 I 48 s chlSab2.chr15 424400 15 - 91754291 GGTCCAGCACTAGGA i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29073332 14 + 31377067 cttctggggTCAGG- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421101 0 - 608964 C e mm10.chr16 65437168 35 - 98207768 I e dasNov3.JH569502 3897925 460 + 6579706 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I a score=3820.000000 s hg38.chr3_KI270779v1_alt 131019 4 + 205312 TGGA s panTro5.chr3 200120037 4 + 202621043 TGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 37454 4 - 55620 TGGA i gorGor5.CYUI01001831v1 C 0 I 909 s nomLeu3.chr11 120877720 4 + 123690457 TGGA i nomLeu3.chr11 C 0 I 1 s chlSab2.chr15 424415 4 - 91754291 TGGA i chlSab2.chr15 C 0 I 1 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421101 0 - 608964 C e mm10.chr16 65437168 35 - 98207768 I e dasNov3.JH569502 3897925 460 + 6579706 I e canFam3.chr33 29073346 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e panPan2.chrUn_NW_014024201v1 95316 0 + 190779 C e macNem1.NW_012014355v1 551529 48 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e macFas5.chr2 75748 0 + 192460366 C e rheMac8.chr2 202468511 46 + 204787373 I a score=13610.000000 s hg38.chr3_KI270779v1_alt 131023 29 + 205312 TGGAGGGGGCTGGGAAGGGGTCCAGCGCT s panTro5.chr3 200120041 29 + 202621043 TGGAGGGGGCTGGGAAGGCGTCCAGCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95316 10 + 190779 -------------------GTCCAGCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38367 29 - 55620 TGGAGGGGGCTGGGAAGGCGTCCAGCGCC i gorGor5.CYUI01001831v1 I 909 C 0 s nomLeu3.chr11 120877725 29 + 123690457 TGCAGGGAGCTGGGAAGGGGTCCAGCACT i nomLeu3.chr11 I 1 C 0 s macFas5.chr2 75748 10 + 192460366 -------------GAAG------AGCTCT i macFas5.chr2 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421101 0 - 608964 C e mm10.chr16 65437168 35 - 98207768 I e dasNov3.JH569502 3897925 460 + 6579706 I e canFam3.chr33 29073346 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 551529 48 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e chlSab2.chr15 424419 1 - 91754291 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e rheMac8.chr2 202468511 46 + 204787373 I a score=2493.000000 s hg38.chr3_KI270779v1_alt 131052 2 + 205312 AG s panTro5.chr3 200120070 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95326 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38396 2 - 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120877754 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 75758 2 + 192460366 GA i macFas5.chr2 C 0 C 0 s otoGar3.GL873829 421101 2 - 608964 ag i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e mm10.chr16 65437168 35 - 98207768 I e dasNov3.JH569502 3897925 460 + 6579706 I e canFam3.chr33 29073346 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 551529 48 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e chlSab2.chr15 424419 1 - 91754291 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e rheMac8.chr2 202468511 46 + 204787373 I a score=19193.000000 s hg38.chr3_KI270779v1_alt 131054 16 + 205312 GATGGAGTG-----GAGGGGG s panTro5.chr3 200120072 16 + 202621043 GATGGAGTG-----GAGGGGG i panTro5.chr3 C 0 I 112 s panPan2.chrUn_NW_014024201v1 95328 16 + 190779 GATGGAGTG-----GAGGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38398 16 - 55620 GATGGAGTG-----GAGGGGG i gorGor5.CYUI01001831v1 C 0 I 38 s nomLeu3.chr11 120877756 16 + 123690457 GATGGAGTG-----GAGGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 75760 13 + 192460366 GA---AATG-----GCGGGGG i macFas5.chr2 C 0 I 5 s otoGar3.GL873829 421103 10 - 608964 gaaggagcg-----g------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29073346 10 + 31377067 ------TTG-----GAAAGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898385 21 + 6579706 gagggagtgagcctgtggggg i dasNov3.JH569502 I 460 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e mm10.chr16 65437168 35 - 98207768 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 551529 48 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e chlSab2.chr15 424419 1 - 91754291 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e rheMac8.chr2 202468511 46 + 204787373 I a score=-4573.000000 s hg38.chr3_KI270779v1_alt 131070 66 + 205312 ----------CTGGGAAGGCGTCCAGCGC-----------TAGTATGGAG-------------------------------------TGAAGGGGGCTGGGAAGGCATCCAGCGCTAGGATGGA s panTro5.chr3 200120200 66 + 202621043 ----------CTGGGAAGGCGTCCAGCGC-----------TAGGATGGAG-------------------------------------TGGAGGGAGCTGGGAAGGCGTCCAGCGCTAGGATGGA i panTro5.chr3 I 112 C 0 s panPan2.chrUn_NW_014024201v1 95344 66 + 190779 ----------CTGGGAAGGCGTCCAGCAC-----------TAGGATGGAG-------------------------------------TGGAGAGGGCTGGGAAGGCGTCCAGCACTAGGATGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38452 102 - 55620 ----------CTGGGAAGGCGTCCAGCGC-----------CAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCG-CCAGGATGGATGGAGGGGGCTGGGAAGGCGTCCAGCgccaggatgga i gorGor5.CYUI01001831v1 I 38 C 0 s nomLeu3.chr11 120877772 66 + 123690457 ----------CTGGGAAGGGGTCCAGCAC-----------TAGGATGGAG-------------------------------------TGGAGGGGGCTGGGAAGGGGTCCAGCACTAGGATGGA i nomLeu3.chr11 C 0 I 1408 s macFas5.chr2 75778 24 + 192460366 ----------CTGAGCGGGC-------------------------TGGAG-------------------------------------TGCAGGGAG---------------------------- i macFas5.chr2 I 5 C 0 s otoGar3.GL873829 421113 11 - 608964 ---------------------------gc-----------cagaatggg--------------------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29073356 15 + 31377067 ----------CTGTGAATGTCATCA--------------------------------------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898406 101 + 6579706 aggggcattccaggcaaagaggacagcacgtgcaaaagctcagagatgag----------------------agggccccgcatgtttgaagaacacaaagaaggcag-tggagcaggaatgga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e mm10.chr16 65437168 35 - 98207768 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 551529 48 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e chlSab2.chr15 424419 1 - 91754291 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e rheMac8.chr2 202468511 46 + 204787373 I a score=-2935.000000 s hg38.chr3_KI270779v1_alt 131136 1 + 205312 -C s panTro5.chr3 200120266 1 + 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95410 1 + 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38554 1 - 55620 -t i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120879246 1 + 123690457 -T i nomLeu3.chr11 I 1408 C 0 s chlSab2.chr15 424420 1 - 91754291 -T i chlSab2.chr15 I 1 C 0 s otoGar3.GL873829 421124 1 - 608964 -c i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29073371 1 + 31377067 -C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898507 1 + 6579706 g- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e mm10.chr16 65437168 35 - 98207768 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 551529 48 + 19675229 I e calJac3.chr17 941647 452 - 74750902 I e saiBol1.JH378146 466355 453 + 17725628 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e macFas5.chr2 75802 0 + 192460366 C e rheMac8.chr2 202468511 46 + 204787373 I a score=-679.000000 s hg38.chr3_KI270779v1_alt 131137 2 + 205312 -GG s panTro5.chr3 200120267 2 + 202621043 -GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95411 2 + 190779 -GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38555 2 - 55620 -gg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120879247 2 + 123690457 -GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468557 1 + 204787373 --G i rheMac8.chr2 I 46 I 1 s chlSab2.chr15 424421 2 - 91754291 -GG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942099 2 - 74750902 -gg i calJac3.chr17 I 452 C 0 s saiBol1.JH378146 466808 2 + 17725628 -gg i saiBol1.JH378146 I 453 C 0 s canFam3.chr33 29073372 2 + 31377067 -AG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898508 2 + 6579706 tg- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421125 0 - 608964 C e mm10.chr16 65437168 35 - 98207768 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e macNem1.NW_012014355v1 551529 48 + 19675229 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e manLeu1.NW_012102020v1 583169 10166 - 1977891 I e cerAty1.NW_012004056v1 490645 48 + 16847902 I e macFas5.chr2 75802 0 + 192460366 C a score=9555.000000 s hg38.chr3_KI270779v1_alt 131139 1 + 205312 A s panTro5.chr3 200120269 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95413 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38557 1 - 55620 a i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120879249 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468559 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macNem1.NW_012014355v1 551577 1 + 19675229 A i macNem1.NW_012014355v1 I 48 C 0 s cerAty1.NW_012004056v1 490693 1 + 16847902 A i cerAty1.NW_012004056v1 I 48 C 0 s chlSab2.chr15 424423 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593335 1 - 1977891 A i manLeu1.NW_012102020v1 I 10166 C 0 s calJac3.chr17 942101 1 - 74750902 a i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466810 1 + 17725628 a i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 421125 1 - 608964 a i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29073374 1 + 31377067 A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898510 1 + 6579706 a i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e mm10.chr16 65437168 35 - 98207768 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e colAng1.NW_012118932v1 460262 0 + 7796314 C e macFas5.chr2 75802 0 + 192460366 C a score=51974.000000 s hg38.chr3_KI270779v1_alt 131140 7 + 205312 GGGGGCT s panTro5.chr3 200120270 7 + 202621043 GGGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95414 6 + 190779 -GGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38558 7 - 55620 gggggct i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120879250 7 + 123690457 GGGGGCT i nomLeu3.chr11 C 0 I 6469 s rheMac8.chr2 202468560 7 + 204787373 GGGAGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75802 2 + 192460366 -----CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551578 7 + 19675229 GGGAGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490694 7 + 16847902 GGGAGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424424 7 - 91754291 GGGAGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593336 7 - 1977891 GGGAGCT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 942102 7 - 74750902 gggagca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466811 7 + 17725628 gggagct i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 421126 7 - 608964 atgggct i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437203 7 - 98207768 GGGAGCT i mm10.chr16 I 35 C 0 s canFam3.chr33 29073375 7 + 31377067 GTGAGCC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3898511 7 + 6579706 gtgaagt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e colAng1.NW_012118932v1 460262 0 + 7796314 C a score=37197.000000 s hg38.chr3_KI270779v1_alt 131147 8 + 205312 GGGAAGGC s panTro5.chr3 200120277 8 + 202621043 GGGAAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95420 8 + 190779 GGGAAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38565 8 - 55620 gggaaggg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885726 8 + 123690457 GGGAAGGG i nomLeu3.chr11 I 6469 C 0 s rheMac8.chr2 202468567 8 + 204787373 GGGAAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75804 8 + 192460366 GGGAAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551585 8 + 19675229 GGGAAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490701 8 + 16847902 GGGAAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424431 8 - 91754291 GGGAAGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593343 8 - 1977891 GGGAAGGG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 942109 8 - 74750902 gggagcgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466818 8 + 17725628 gggaaggg i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 421133 3 - 608964 -gga---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437210 6 - 98207768 GGGAGG-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29073383 2 + 31377067 GG------ i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3898518 4 + 6579706 gggg---- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e colAng1.NW_012118932v1 460262 0 + 7796314 C a score=77048.000000 s hg38.chr3_KI270779v1_alt 131155 14 + 205312 GTCCAGCACTAGGA s panTro5.chr3 200120285 14 + 202621043 GTCCAGCACTAGGA i panTro5.chr3 C 0 I 369 s panPan2.chrUn_NW_014024201v1 95428 14 + 190779 GTCCAGCACTAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38573 14 - 55620 gtccagcactagga i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885734 14 + 123690457 GTCCAGCACTAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468575 11 + 204787373 GTCCAGCACT---A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75812 14 + 192460366 GTCCAGCACTAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551593 11 + 19675229 GTCCAGCACT---A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490709 14 + 16847902 GTCCAGCACTAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424439 14 - 91754291 GTCCAGCACTAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593351 14 - 1977891 GTCCAGCACTAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460262 14 + 7796314 gtccagcactaggt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942117 11 - 74750902 gtatagc---atga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466826 14 + 17725628 gtgtagcaggagga i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3898522 10 + 6579706 ----ggtagtagga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e otoGar3.GL873829 421136 0 - 608964 C e mm10.chr16 65437216 0 - 98207768 C e canFam3.chr33 29073385 0 + 31377067 C e cebCap1.NW_016107444v1 430488 581 - 6778120 I a score=470969.000000 s hg38.chr3_KI270779v1_alt 131169 98 + 205312 GAAGAGCTCTGAGAAG-------------CTGAACTGGGCC--G---AAGGCCACTGCAAGGATGGAGAGAGCCAGGGAAGTCTCTGAAGGG-TTT-GAGCAGAGGAATGCCAGGAGT s panPan2.chrUn_NW_014024201v1 95442 98 + 190779 GAAGAGCTCTGAGAAG-------------CTGAACTGGGCC--A---AAGGCCACTGCAAGGATGGAGAGAGCCAGGGAAGTCTCTGAAGGG-TTT-GAGCAGAGGAATGCCAGGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38587 98 - 55620 gaagagctctgagaag-------------ctgaactgggcc--g---aaggccactgcaaggatggagagagccagggaagtccctgaaggg-ttt-gagcagaggaatgacaagaGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885748 97 + 123690457 GAAGAACTCTGAGAAG-------------CTGAACCAGGCC--A---AAGGCCACTGCAAGGAT-GAGACAGCCAGGGAAGTCACTGAAGGG-TCT-GAGCAGAGGAATAACAGGAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468586 98 + 204787373 GAAGAGCTCTGAGAAG-------------CCGAACTGGGCC--A---AAGGCCACTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGG-TCT-GAGCAGAGGAATAACAGGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75826 98 + 192460366 GAAGAGCTCTGAGAAG-------------CTGAACCGGGCC--A---AAGGCCCCTGCTAGGATGGAGAGAGCGGgggaagccactggaggg-tct-gagcagaggaataacaggaGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551604 98 + 19675229 GAAGAGCTCTGAGAAG-------------CCGAACTAGGCC--A---AAGGCCACTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGG-TCT-GAGCAGAGGAATAACAGGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490723 98 + 16847902 GAAGAGCTCTGAGAAG-------------CCGAACCGGGCC--A---AAGGCCACTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGG-TCT-GAGCAGAGGAATAACAGGAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424453 98 - 91754291 GAAGAGCTCTGAGAAG-------------CTGAACCAGGCC--A---AAGGCCACTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGG-TCT-GAGCAGAGGAATAACAGGAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593365 98 - 1977891 GAAGAGCTCTGAGAAC-------------CCGAACCGGGCC--A---AAGGCCACTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGG-TCT-GAGCAGAGGAATAACAGGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460276 98 + 7796314 gaagagctctgagaag-------------ccgaactgggcc--a---aaggccactgctaggatggagagagccagggaagccactggaggg-tct-gagcagaggaataacaGCAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942128 95 - 74750902 gaagacctctaagaagcggcgggaccagactgaac-aggcc--t---aaggccacggtaaggatggagagagcc-gggaagtcagtggagga-ttt-gagcaga-------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466840 95 + 17725628 gaagatctctgggaagcggcgggaccagactgaac-aggcc--t---aaggccaccgtaaggatggagagagcc-gggaagtcactggagga-ttt-gagcaga-------------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 421136 84 - 608964 -----------------------------ccaaatcaggtc--at-tgagaccatcgcaagcgcctagtgagtt-gggggttcacgggaagg-tttggagtgcaagagtaatgtgaGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437216 52 - 98207768 --------------------------------------------ATTTGACCCACTAAAGGAATAAAGA----------------CGTGGAG-CTT-GAG----GGAATGCCATGAAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29073385 25 + 31377067 ---------------------------------------------------------------------GAGTCATGGGAG-----GAACAA-CCT-GAGC----------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898532 112 + 6579706 gaacaattcagaggca-acagggacaagcctgaatagtgccttg---aaggtcattgtaaggactgagtaaatt-gggaagtcattggtggacttt-gagcagaggactaacaggaGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e cebCap1.NW_016107444v1 430488 581 - 6778120 I e panTro5.chr3 200120299 369 + 202621043 I a score=311479.000000 s hg38.chr3_KI270779v1_alt 131267 44 + 205312 GGAAGAATCTGCTCAGTGAATG-----CAGATGCACAGGGAAAAGCAGG s panPan2.chrUn_NW_014024201v1 95540 44 + 190779 GGAAGAATCTGCTCCGTGAATG-----CAGGTGCACAGGGAAAAGCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38685 44 - 55620 GGAAGAATCTGCTCTGTGAATG-----CAGATAAACAGGGAAAAGCAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885845 44 + 123690457 GGAAGAATCTGCTCAGTGAATG-----CAGATATACAGGGTAAAGCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468684 44 + 204787373 AAAAGAATCTGTTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75924 44 + 192460366 AAAAGAATCTGTTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551702 44 + 19675229 AAAAGAATCTGTTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490821 44 + 16847902 AAAAGAATCTGTTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424551 44 - 91754291 AAAAGAATCTCTTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593463 44 - 1977891 AAAAGAATCTGTTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460374 44 + 7796314 AAAAGAATCTGCTCAGTGAATG-----CAGATGCACAGGGTAAAGCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942223 44 - 74750902 ggaagaatctgctccgTGAATG-----CAGTTGCGCAGGGTCCAGCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466935 44 + 17725628 ggaAGAATCTGCTTGGTGAATG-----CAGATGCGCAGGGTCATGCAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431069 44 - 6778120 GGAAGAATCTGCTCGGTGAAGG-----CAGAGGCGCAGGGCCAAGCAGG i cebCap1.NW_016107444v1 I 581 C 0 s otoGar3.GL873829 421220 44 - 608964 AACAGAATCTGTTAAGTGAATA-----AAAATGCAGAGCTTAAGGGAGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437268 5 - 98207768 ------------------------------------GGGGG-------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29073410 41 + 31377067 AAAAGAATCTGTTAAATTTTTA-----AAGGAATATCGTGAAAAGG--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898644 49 + 6579706 AAAAGAATCCATTAAGTGAATGAAAAAAAAATGGATAGCTTATAGGAAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e micMur3.chr1 25907417 766 - 114275543 I e panTro5.chr3 200120299 369 + 202621043 I a score=15300.000000 s hg38.chr3_KI270779v1_alt 131311 1 + 205312 G s panPan2.chrUn_NW_014024201v1 95584 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38729 1 - 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885889 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468728 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75968 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551746 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490865 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424595 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593507 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460418 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942267 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466979 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431113 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25908183 1 - 114275543 G i micMur3.chr1 I 766 C 0 s otoGar3.GL873829 421264 1 - 608964 G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29073451 1 + 31377067 G i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898693 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7422236 868 + 22200726 I e mm10.chr16 65437273 0 - 98207768 C e panTro5.chr3 200120299 369 + 202621043 I a score=795457.000000 s hg38.chr3_KI270779v1_alt 131312 73 + 205312 TCAG--GCAAGGGCAGCTCCTCATCTGCTCCCGA-CTCTGAAAAGGCCTCCCCAG---GC----CTCGGGCCACTTACTGAGG s panPan2.chrUn_NW_014024201v1 95585 73 + 190779 TCAG--GCAAGGGCAACTCCTCATCTGCTCCCGA-CTCTGAAAAGGCCTTCCCGG---GC----CTCGGGCCACTTACTGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38730 73 - 55620 TCAG--GCAAGGGCAGCTCCTCATCTGCTCCCGA-CTCTGAAAAGGCCTCCCCGG---GC----CTCGGGCCACTTACTGAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885890 73 + 123690457 TCAG--GCAAGGGCAGCTCCTCATCTGCTCCCAA-GTCTGAAAAGCCCTCCCGGG---GC----CTCGGGCCACTTACTGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468729 72 + 204787373 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTG--CTCTGAAAAGGCCTCCCAGG---GG----CTCGGGCCACTTACTGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 75969 72 + 192460366 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTT--CTCTGAAAAGGCCTCCCAGG---GG----CTTGGGCCACTTACTGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551747 72 + 19675229 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTG--CTCTGAAAAGGCCTCCCAGG---GG----CTCAGGCCACTTACTGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490866 72 + 16847902 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTG--CTCTGAAAAGGCCTCCCAGG---GG----CTCGGGCCACTTACTGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424596 72 - 91754291 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTG--CTCTGAAAAGGCCTCCCGGG---GG----CTCAGGCCACTTACTGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593508 72 - 1977891 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTG--CTCTGAAAAGGCCTCCCAGG---GG----CTCGGGCCACTTACTGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460419 73 + 7796314 TCAG--GGAAGGGCAGCTCCTCATCTGCTTCTGA-CTCTGAAAAGGCCTCCCGGG---GC----CTCGGGCCACTTACTGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942268 71 - 74750902 TCAC--GGAA-GGCTGCTCCTCA-CAGCTCCCAG-CTCTGAAAAGGCCTCCTGGG---GC----GTTGGGCCACTTACTGAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 466980 72 + 17725628 TCAG--GGAA-GGCTGCTCCTCATCGGCTCCCGG-CTCTGAAGAGGCCTCCTGGG---GC----CTCGGGCCACTTACTGAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431114 72 - 6778120 TCAG--GGAG-GGCTGCTCCTCCTCAGCCCCCGG-CTCTGAAAAGGCCTCCTGGG---GC----CTCGGGCCACTTACTGACG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25908184 74 - 114275543 TCAG--GGAAGGGCAGCTCCTCATCTGTTCCCCAGCTCTGAAAATGCCTCCCTGG---GC----CACACGCCGCTTACTGAGG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7423104 74 + 22200726 TCAG--GGAAGGGCAGCTCTTCATCTGTTCCCCAGCTCTGAAAATGCCTCCCTGG---GC----CACGCGCCGCTTACTGAGG i proCoq1.NW_012133858v1 I 868 C 0 s otoGar3.GL873829 421265 74 - 608964 TCAG--GGAAGGGCGGCTCCTTATCTGCCCCCCAGCTCTGAAAATGCCTCCCTGG---GC----CACACGCCACTTACGGAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437273 62 - 98207768 -----------------TCCTTGCCTGCTCCCCATCTCTGGAAAGGTCTCCCCGACCTTC----CTCGTGTCACTTACTGAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29073452 80 + 31377067 TGGGGCGGGAGGGGGGCTCCTAATCTGCCACCTAACTCTGCAAACGTCTCCCCGC---GCGCGACGCACGCCACTTACTGAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898694 73 + 6579706 TTGT--GGAAGATGGACTCCTCACCTGCTCCCTA-ATCTGGAAATGCGTCCTTGG---GC----CATATGACACTTACTGAGA i dasNov3.JH569502 C 0 C 0 e panTro5.chr3 200120299 369 + 202621043 I a score=165137.000000 s hg38.chr3_KI270779v1_alt 131385 9 + 205312 GTGGCGTTC s panTro5.chr3 200120668 9 + 202621043 GTGGCGTTC i panTro5.chr3 I 369 C 0 s panPan2.chrUn_NW_014024201v1 95658 9 + 190779 GTGGCGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38803 9 - 55620 GTGGCGTTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885963 9 + 123690457 GTGGCATTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468801 9 + 204787373 GTGGCGTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76041 9 + 192460366 GTGGCATTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551819 9 + 19675229 GTGGCGTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490938 9 + 16847902 GTGGCGTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424668 9 - 91754291 GTGGCGTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593580 9 - 1977891 GTGGCGTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460492 9 + 7796314 GTGGCGTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942339 9 - 74750902 GTGGCGTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467052 9 + 17725628 GTGGCGTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431186 9 - 6778120 GTGGCGTTC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25908258 9 - 114275543 GTGGTGTTC i micMur3.chr1 C 0 I 148 s proCoq1.NW_012133858v1 7423178 9 + 22200726 GTGGCGTTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 421339 9 - 608964 GTGCCGTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437335 9 - 98207768 GTGTCATTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29073532 9 + 31377067 GTGGCGTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898767 9 + 6579706 GTGGCGTTC i dasNov3.JH569502 C 0 C 0 a score=1477153.000000 s hg38.chr3_KI270779v1_alt 131394 148 + 205312 GCCTGCTCGTAGTTTTTACTGACTTCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTATCTCCGTCACA-GTTGGAGATCAAATGTTCAGCCCAGGAGCTGTTTTTTTGCA-GTTGTGAGT s panTro5.chr3 200120677 148 + 202621043 GCCTGCTCGTAGTTTTTACTGACTTCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCGTCACA-GTTGGAGATCAAATGTTCAGCCCAGGAGCTGTTTTTTTGCA-GTTGTGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95667 148 + 190779 GCCTGCTCGTAGTTTTTACTGACTTCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCGTCACA-GTTGGAGATCAAATGTTCAGCCCAGGAGCTGTTTTTTTGCA-GTTGTGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38812 148 - 55620 GCCTGCTCGTAGTTTTTACTGACTTCCCTCGTGTGAAGTCCGATGCTTGCGTTGCTCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCGTCACA-GTTGGAGATCAAATGTTCAGCCCAGGAGCTGTTTTTTTGCA-GTTGTGAGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120885972 142 + 123690457 ACCTGCTCGTAGGTTTTACTGACTGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGAGTGTCATAGATGCATGAGCTGTCTCCGTCAC-------AGATCAAAGCTTCAGCCCAGGAGCTGTTTTTTTGCA-GTTGTGAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468810 145 + 204787373 ACCTGCTTGTAGGTTTTGCTGACGGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCA-GTTGTGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76050 145 + 192460366 ACCTGCTTGTAGGTTTTGCTGATGGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCA-GTTGTGAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551828 145 + 19675229 ACCTGCTTGTAGGTTTTGCTGACGGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGAAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCA-GTTGTGAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 490947 145 + 16847902 ACCTGCTTGTAGGTTTTGCTGACGGCCCGCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCA-GTTGTGAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424677 148 - 91754291 ACCTGCTTGTAGGTTTTGCTGACGGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCAAATCTTCAGCCCATGAGCTGTTTTTTTGCA-GTTGTGAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593589 145 - 1977891 ACCTGCTTGTAGGTTTTGCTGACGGCCCTCGTATGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCA-GTTGTGAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460501 148 + 7796314 ACCTGCTTGTAGGTTTTGCTGATGGCCCTCGTGTGAAATCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATGACA-GTTGGAGATCAAATCTTCATCCCAGGAGCTGTTTTTTTGCA-GTTGTGAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942348 148 - 74750902 ACCCGCTCGTA-GTTTTATGGAGCGCCAGCGTGTGATGTCCAATGCTTGTGTTGCGCGTGGCCAGGGCGTCATAGATGCAGGATCTATCTCCGTTGCAGGCTGGAGATCAAATCTTGATCCGAGGAGCTGTTTGTTCGCA-GTTGGTCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467061 148 + 17725628 ACCCGCTCGTAGGTGTTACGGAGCGCCAGCGTGTGAAGTCCGATGCTTGCGTTGCGCGTGGCAAGGGCGTCGTAGATGCAGGATCTGTCTCCGCTGCA-GCTGGAGATCAAGTCTTCATCCCAGGAGCTGTTTGTTTGCA-GCTGGTCGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431195 148 - 6778120 ACCCGCTCGTAGGTTTTACGGAGCGCCAGGGTGTGAAGTCCAACGCCTGCGCTGCGCGTGGCGAGGGCGTCGTAGATGCAGGCTCTGTCTCCGTTGCA-GCTGGAGATCAAATCTTCATCCAGGGAGCTGTTGGTTTGCA-GCTGGTCGT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7423187 148 + 22200726 ATCTCTTGGTATCTTCTAAAGAGCATCATCGTGTGAAGTCCAGTGCTTGTGTCGCGCGTGAGCAGGGCGTCATAGATGCACTGTCTCTGTCCGTTACA-GCTGGAGACCAAATTTTCATCCAAGGATTTGTTTCCCGACA-GTTGGGAAA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 421348 148 - 608964 ATCTCTTGGTATCTTCTAAATAGCATCATTGTATGAAGTCCAGTGCTTTTATTACCCGTGACCAGGGTGTCATAGATGCATTGCCTATCTCCATTACA-GCTGGTCACCAAATTTTTATCTGAGGAGTTGTTCGCCACCA-GTTGGGAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437344 148 - 98207768 ATATGTTGGAACTCATTAAGGATGGAATTGGTGCTTTGTCCAATAGTTCTGTTTCCCGTGGCCAGGATGTCAAACATGCACTTTCTGTCGCCTTTGCA-CCCAGAGGCCAAGTCTTCACCTGAGGCACTCTGATTCAACA-GTTGAGACA i mm10.chr16 C 0 C 0 s canFam3.chr33 29073541 148 + 31377067 ATCCGCTGCTGACTTGCGAAGAGCATCCTGGTGTTCAGGCCCGTGTCTGTGTTTCCTGTGGCCAGGCTGTCATAGATGCACCGCTCATCTTCATGACA-CTTGGAGAGCAGCATTTCATTTAAGGTTTTATTTTTCTGCAGGCTGGTAA- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898776 148 + 6579706 ATCAACTGGTATCTTCTAAAGAATGCTGAAGTGTGCAATCCAATGCTTCTGTTTCTTGTGACCAAGGTGTCGTAGGTGCAATGTGTATTATTGTTACA-CTCAGAGATCAAATTATCTTCTAAGGAGTTGTTGGTTAACA-GTTGAGAGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25908267 148 - 114275543 I a score=1330750.000000 s hg38.chr3_KI270779v1_alt 131542 82 + 205312 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA s panTro5.chr3 200120825 82 + 202621043 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCATTGATCTGCCCTGT-------AACACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95815 82 + 190779 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCATTGATCTGCCCTGT-------AACACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 38960 82 - 55620 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCTTTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886114 82 + 123690457 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTATTGCCAAGGAGGCCTGTGCCGTTGATCTGCCCTGT-------AACACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202468955 82 + 204787373 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76195 82 + 192460366 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGAAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 551973 82 + 19675229 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491092 82 + 16847902 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424825 82 - 91754291 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593734 82 - 1977891 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGT-------AACACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460649 82 + 7796314 AGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTAT-------AACACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942496 82 - 74750902 AGAAAACAGGGGTGAAGTTGGAGGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTCCCCTGT-------AACACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467209 82 + 17725628 AGAAAGCAGGGGTGAAGTTGGAGGGCAGCTGGTCATTCCTCTTGCCCAGGAGGCCTGTCCCGTTGATCTTCCCTGT-------AACACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431343 89 - 6778120 AGAAAACAGGGCTGAAGCCGGGGGGCAGCGGGTCGTTCCTGTCCCCGAGGAGGCCTGTCCTGTTGATCTCCCCTGTAACATGGAACACG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25908415 82 - 114275543 AGAAGACAGGGGTGAAGTTGGAGGGCAGATGGTCTTTCCTCTCGCCAAGGAGGCTTGTTTCATTGATTTTCCCTGT-------AACACA i micMur3.chr1 I 148 I 164 s proCoq1.NW_012133858v1 7423335 82 + 22200726 AGAAGACAGGGGTGAAGCTGGAGGGCAGATGATCGTTCTTCTTGCCAAGGAGGCTTGTTTCGTTGATTTTCCCTGT-------AACGCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 421496 82 - 608964 AGAAGACAGGGGTGAAGTTGGAAGCCAGGTGGTCACTCTTCTTGCCAAAGAGGCTTGTTCCATTGATTTTCCCTGT-------AACATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437492 82 - 98207768 GAAAGATGGGGGTGAACTTGGTAGGCAGCGGGTCTGCCCTTATCCCAAGGAGGCCTGTTCCGTTGACGTGCCCTGT-------AACACA i mm10.chr16 C 0 I 1 s canFam3.chr33 29073689 82 + 31377067 GGAAATCGGGGGTGAAGTTGGAAGGCGGATGGTCACCTCTCTCGCCAAGGAGTCCCGTATCATTGGTTTTCCCTGT-------AAGACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3898924 82 + 6579706 GGAAGATGGGGGTGAAGTTGGAAGGCAGATGGTCGTTCCTCTTGCCAAGGAAGCTTGTTCCGTTGATTTTCCCTAT-------AACAAA i dasNov3.JH569502 C 0 C 0 a score=14742.000000 s hg38.chr3_KI270779v1_alt 131624 1 + 205312 C s panTro5.chr3 200120907 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95897 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39042 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886196 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469037 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76277 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552055 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491174 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424907 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593816 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460731 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942578 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467291 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431432 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7423417 1 + 22200726 C i proCoq1.NW_012133858v1 C 0 I 164 s otoGar3.GL873829 421578 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29073771 1 + 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899006 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25908497 164 - 114275543 I e mm10.chr16 65437574 1 - 98207768 I a score=1269604.000000 s hg38.chr3_KI270779v1_alt 131625 160 + 205312 AGAGCGCGG---TG------GTA--CCAGGCATGGCACT-CAGCCTTATTCCATCTGTGTCCACCTCTACCCCTCACTTTAGATGGCT---------------------------------------------------TGGAGC-----GGG-GCGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTAGAAACACCTGCTGCAGTGAGAGAGGACACT- s panTro5.chr3 200120908 160 + 202621043 AGAGCGTGG---TG------GTA--CCAGGCATGGCACT-CAACCTTATTCCATCTGTGTCCACCTCTACCCCTCACTTTATATGGCT---------------------------------------------------TGGAGC-----AGG-GTGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTAGAAACACCTGCTGCAGTGAGAGAGGACACT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 95898 160 + 190779 AGAGCGTGG---TG------GTA--CCAGGCATGGCACT-CAACCTTATTCCATCTGTGTCCACCTCTACCCCTCACTTTATATGGCT---------------------------------------------------TGGAGC-----AGG-GTGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTAGAAACACCTGCTGCAGTGAGAGAGGACACT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39043 160 - 55620 AGAGCGCGG---TG------GTA--CCAGGCATGGCACT-CAGCCTTATTCCATCTGTGTCCATCTCTACCCCTCACTTTATATGGCT---------------------------------------------------TGGAGC-----GGG-GCGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTAGAAACACCTGCTGCAGTGAGAGAGGACACT- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886197 150 + 123690457 AGAGCACGA---TG------GTA--CCAGGCGTGGCACT-CAGCCTTATTCCACCTGTGTCCGCCTCTACCCCTCACTTTATATGGCT---------------------------------------------------TGGGGT-----GGG-GCGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAG----------CCTGCTGCAGTGAGAGAGGACACT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469038 160 + 204787373 AGAGCGTGA---TG------GTA--CCGGGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCC---------------------------------------------------TGGAGC-----AGG-GCGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGAGAGAGGACGCT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76278 160 + 192460366 AGAGCGTGA---TG------GTA--CCGGGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCC---------------------------------------------------TGGAGC-----AGG-GCGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGAGAGAGGACGCT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552056 160 + 19675229 AGAGTGTGA---TG------GTA--CCGGGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCC---------------------------------------------------TGGAGC-----GGG-GCGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCGGTGAGAGAGGATGCT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491175 211 + 16847902 AGAGCGTGA---TG------GTA--CCCGGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCCTGGAGCGGGGCGGTGGGAGTGCAGGGCGACAGCGGTTTCTAGCTTCTGGGTTGGAGC-----GGG-GCGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGAGAGAGGACGCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 424908 159 - 91754291 AGAGCGTGA---TG------GTA--CCGGGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCT---------------------------------------------------TGGAGC------AG-GCCG--TGGGAGT--GCAGGGCCACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGACAGAGGACACT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593817 160 - 1977891 AGAGCGTGA---TG------GTA--CCGGGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCC---------------------------------------------------TGGAGC-----GGG-GCGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGTGGTGAGAGAGGACACT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460732 160 + 7796314 AGAGCGTGA---TG------GAA--CCACGCATGGCACT-CAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCT---------------------------------------------------TGGAGC-----GGG-GTGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGAGAGAGGACACT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942579 148 - 74750902 AGGGCTCTA---TGGTCGT-GTA--TCAGGTGT-GCACT-CAGCCTCATGTTGTCTGTGTCCACCCCTACCCCTCACTTTG----------------------------------------------------------GG----------GG-GCTG--TGGGAGT--GCAGAGCCAGAGCAGTTTCCAGCT--TGAGTCTGGAAACGCATGCTGCAAT--GAGAGGACCCT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467292 158 + 17725628 AGGGCTCGA---CGGTCGG-GTA--TCAGGTGTGGCACT-CAGCCTCATTTTGTCCGTGTCCACCCCTACCCCTCGCTTTACGTGGCT---------------------------------------------------TG----------CG-GCTG--TGGGAGT--GCAGGCCCAGAGCGGCTTCCAGCT--TGAGTCTGGAAACGCCTGCTGCAACGGGAGAGGCCCCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431433 155 - 6778120 AGGGCTC-A---CGGCCGT-GTG--TCAGGTGTGGCACT-CAGCCTCACTCTGTCTGTGTCCA-CCCTGCCCCTCACTTTACGTGGCT---------------------------------------------------TG----------GG-GCGG--CGGGAGT--GCAGGGCCAGAACGGTTTCCAGCA--TGAGTCTGGAAGCGCCTGCTGCAATGAGAGAGG-CCCT- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 421579 108 - 608964 -AAGGGTGA---TG------GTGGTTCAGG-GTGGGACT-CAGCTGTGTTTCTGCTGTGTCTGCCCCTAACTCTCAGGTTATATGGCT---------------------------------------------------CAGGAC-----AGG-GGAT--GGGGTAT--GTAGG-----------------------------GAAGCCC------------------------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437575 157 - 98207768 GAGGTACGAGGGTG------GTA--TAAGACAC-------CAGTCATATTTCACTTGTGCCCACCCCTAGCTCTC--TGTATATGGTT---------------------------------------------------TTGTGCGTAAGGGG-GTGGCCTGGGAGCTGGTAGGAACAGGATAATTTC-------AGAGTCTGGAAATCCCTGCTTCAGTGAGTGAAGACCAC- i mm10.chr16 I 1 C 0 s canFam3.chr33 29073772 151 + 31377067 AGGATGCAA---TGGCGGTGGCA--CCAGGGATGGTCTC-CAGC---------------TCTACTCCCTCCCCTCACTTTATGTGCCT---------------------------------------------------GGGGGT-----GAGCGAGG--CAGATGC--GGAGGGCTGGAGTGACTTCTGGCTTCTGAGGCCGGAAATGCCTACTCTGGTCAGTGAGAGCCA-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899007 155 + 6579706 GAGGTGTGA---TG------GTG--------GTGGGACTCCAGTTATGTTTCTGCCATGCCCACCCTTATCT-TCACTTTATATGGCT---------------------------------------------------TGGGGA-----GAGTGAAG--AGAGTGT--GGAGGGACAGAATGGCTTCTGGCTTCTG-GCCCAGTGATCCCAGTTCCAGTGGGTAAAGGTCCAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423418 164 + 22200726 I e micMur3.chr1 25908497 164 - 114275543 I a score=454969.000000 s hg38.chr3_KI270779v1_alt 131785 43 + 205312 CCACGTCCCCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGG s panTro5.chr3 200121068 43 + 202621043 CCACGTCCCCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96058 43 + 190779 CCACGTCCCCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39203 43 - 55620 CCACGTCCCCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886347 43 + 123690457 CCACGTCCTCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469198 43 + 204787373 CAACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76438 43 + 192460366 CGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552216 43 + 19675229 CGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491386 43 + 16847902 CGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425067 43 - 91754291 CGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 593977 43 - 1977891 CGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460892 43 + 7796314 GGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942727 40 - 74750902 CCAC-CCCGCCCTTCTCTCCTCCAGGT--AGAGATACAGGTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467450 41 + 17725628 CCA--GCCGCCCTTCCCTCCTCCAGGTGGAGAGGCGCAGGTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431588 42 - 6778120 CCAC-CCCGCCCTGCTCTTCCCCAGGTAGAGAGATACAGCTGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25908661 43 - 114275543 CCATGTTCCCCATTCTCTCTTCCAGGTAGAGAGATGCAGGTGG i micMur3.chr1 I 164 I 142 s proCoq1.NW_012133858v1 7423582 43 + 22200726 CCACGTTCCCCATCCTCTCTTCCAGGTAGAGAGATGCAGGTGG i proCoq1.NW_012133858v1 I 164 I 142 s otoGar3.GL873829 421687 42 - 608964 TCACATCCCCTATCCTCTCTTTCAGGTAGAG-GACAGTGGTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437732 40 - 98207768 ---CCACTCCTTTCCTCCTTTCCTGGAAGAGACGTGCAGCTAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29073923 43 + 31377067 CCCCTGCCCTTGTCTCCTCTTCCAGGTAGAGAAGCGCAGATGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899162 40 + 6579706 CCAT-TTCCCTGTCCTGCCTTCCGGGTAGAGAG--GCGGTTGG i dasNov3.JH569502 C 0 C 0 a score=44970.000000 s hg38.chr3_KI270779v1_alt 131828 10 + 205312 GCTGGTGGTG s panTro5.chr3 200121111 10 + 202621043 GCTGGTGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96101 10 + 190779 GCTGGTGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39246 10 - 55620 GCTGGTGGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886390 8 + 123690457 GCTGGTG--G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469241 10 + 204787373 ACTGGTCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76481 10 + 192460366 ACTGGTCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552259 10 + 19675229 ACTCGTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491429 10 + 16847902 ACTGGTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425110 10 - 91754291 GCTGGTCCTG i chlSab2.chr15 C 0 I 9 s manLeu1.NW_012102020v1 594020 10 - 1977891 ACTGGTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 460935 10 + 7796314 GCTGGTGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942767 10 - 74750902 GATGGCAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467491 10 + 17725628 GTTGGCCGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431630 10 - 6778120 GTTGGCAGCG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 421729 9 - 608964 -CATGGGATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65437772 10 - 98207768 GGTGGGAGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29073966 10 + 31377067 GATGGGAGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899202 10 + 6579706 CATGGGGGTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423625 142 + 22200726 I e micMur3.chr1 25908704 142 - 114275543 I a score=136282.000000 s hg38.chr3_KI270779v1_alt 131838 14 + 205312 GTGGGGACAGCCCT s panTro5.chr3 200121121 14 + 202621043 GTGGGGACAGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96111 14 + 190779 GTGGGGACAGCCCT i panPan2.chrUn_NW_014024201v1 C 0 I 1 s gorGor5.CYUI01001831v1 39256 14 - 55620 GTGGGGACAGCCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886398 14 + 123690457 GGGGGGACAGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469251 13 + 204787373 -GGGGGACAGTCCT i rheMac8.chr2 C 0 I 10 s macFas5.chr2 76491 13 + 192460366 -GGGGGACAGTCCT i macFas5.chr2 C 0 I 10 s macNem1.NW_012014355v1 552269 13 + 19675229 -GGGGGACAGTCCT i macNem1.NW_012014355v1 C 0 I 10 s cerAty1.NW_012004056v1 491439 13 + 16847902 -GGGGGACAGTCCT i cerAty1.NW_012004056v1 C 0 I 10 s manLeu1.NW_012102020v1 594030 13 - 1977891 -GGGGGACAGTCCT i manLeu1.NW_012102020v1 C 0 I 10 s colAng1.NW_012118932v1 460945 14 + 7796314 GAGGGGACAGTCCT i colAng1.NW_012118932v1 C 0 I 9 s calJac3.chr17 942777 14 - 74750902 GAGGGGACAGACCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467501 14 + 17725628 GAGGGGACAGGCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431640 14 - 6778120 GAGGGGACAGACCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 421738 14 - 608964 GAGGGGACAAATCT i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65437782 12 - 98207768 --GGGGACAGACAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29073976 13 + 31377067 -GGGGGACAAGTCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899212 14 + 6579706 GAAGGGACAAATCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423625 142 + 22200726 I e micMur3.chr1 25908704 142 - 114275543 I e chlSab2.chr15 425120 9 - 91754291 I a score=869113.000000 s hg38.chr3_KI270779v1_alt 131852 116 + 205312 GGGGGGGCA----CAGATTCCTCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCCGAGGGGGACGAC-ATAAACATACCGGCTCCC---CT---------------------------------------------------------------------------------------CACCTGCCCC-TCTGCCCC-AGGACCCT s panTro5.chr3 200121135 116 + 202621043 GGGGGGGCA----CAGATTCCTCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCCACAGGGCCGAGGGGGACGAC-ATAAACATAGCAGCTCCC---CT---------------------------------------------------------------------------------------CACCTGCCCC-TCTGCCCC-AGGGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96126 116 + 190779 GGGGGGGCA----CAGATTCCTCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCCGAGGGGGACGAC-ATAAACATAGCAGCTCCC---CT---------------------------------------------------------------------------------------CACCTGCCCC-TCTGCCCC-AGGGCCCT i panPan2.chrUn_NW_014024201v1 I 1 C 0 s gorGor5.CYUI01001831v1 39270 116 - 55620 GGGGGGGCA----CAGATTCCTCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCCGAGGGGGATGAC-ATAAACATACCGGCTCCC---CT---------------------------------------------------------------------------------------CACCTGCCCC-TCTGCCCC-AGGACCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886412 116 + 123690457 GGGGGGGCA----CAGATTCATCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCCGAGGGGGACGAC-ATAAACATACCGGCTCCC---CT---------------------------------------------------------------------------------------CACCTGCCCC-TCTGCCCC-AGGACCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469274 117 + 204787373 GGGGGGGCA----CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACACTGGCTCTC---CT---------------------------------------------------------------------------------------TACCTGCCCCTTCTGCCCC-GAGACCCT i rheMac8.chr2 I 10 C 0 s macFas5.chr2 76514 117 + 192460366 GGGGGGGCA----CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACACTGGCTCTC---CT---------------------------------------------------------------------------------------TACCTGCCCCTTCTGCCCC-GAGACCCT i macFas5.chr2 I 10 C 0 s macNem1.NW_012014355v1 552292 117 + 19675229 GGGGGGGCA----CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACACTGGCTCTC---CT---------------------------------------------------------------------------------------TACCTGCCCCTTCTGCCCC-TAGACCCT i macNem1.NW_012014355v1 I 10 C 0 s cerAty1.NW_012004056v1 491462 117 + 16847902 GGGGGGGCA----CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACACTGGCTCTC---CT---------------------------------------------------------------------------------------TACCTGCCCCTTCTGCCCC-GAGACCCT i cerAty1.NW_012004056v1 I 10 C 0 s chlSab2.chr15 425129 117 - 91754291 GGGGGGGCA----CAGATTCCCCAG--------------------------ACCTCAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGCGGGACGAC-CTAAACACACTGGCTCTC---CT---------------------------------------------------------------------------------------TACCTGCGCCTTCTGCCCC-AAGACCCT i chlSab2.chr15 I 9 C 0 s manLeu1.NW_012102020v1 594053 117 - 1977891 GGGGGGGCA----CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACACTGGCTCTC---CT---------------------------------------------------------------------------------------TACCTGCCCCTTCTGCCCC-GAGATCCT i manLeu1.NW_012102020v1 I 10 C 0 s colAng1.NW_012118932v1 460968 117 + 7796314 GATGGGGCA----TAGATTCCTCAG--------------------------ATCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACATACTGACTCTC---CT---------------------------------------------------------------------------------------TACCTGCCCCTTCTGCCCC-AAGACCCT i colAng1.NW_012118932v1 I 9 C 0 s calJac3.chr17 942791 129 - 74750902 AGGATAGCA----TAGATTCCTCAG--------------------------ACCTTACGAAGGAT------GGTCTGCTTCCTACAGGCCCGAGGGAGACGAC-ATAAACATACCAGCTCCC---CTCTACCTGG------------------------------------------------------------------------CCTGCCCCATCTGCCCTATCTGCCCC-AGGACTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467515 200 + 17725628 -GGGTAGCA----CAGATTCCTCAG--------------------------ACCTTGCGAAAGAC------GGTCTGCTTCCTACAGGCCCCAGGGAGATGAC-AGGAACATGccagctccc---ctcagcctggcctgccccacctgccccacctgccccacctgccccacctgccccacctgccccacctaccccacctgccccacctgccccacctgccccacctgcccc-aGGACTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431654 123 - 6778120 GGGGCAGCA----CAGACCCCTCCG--------------------------AC---------------------CTGCTTCCTACAGGCCCGAGGGAGGCGAC-AGGAGCACACCGGCTCAC---CTCAGCCCGG---------------------------------------------------------------Cctgccccatctgccccatctgccctatctgcccc-aGGACTCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 421753 117 - 608964 GGAGTGGCA---TCAGAATCCTCAG--------------------------ACCTTACAAAGGATG---GAATTCTGGTTCCTATAGACCTGGGGGTGAC-------AGCATCCCAGCTCCC---TC----------------------------------------------------------------------------------ATCCCAGCCTGCCCCATCTGCCCC-AGGATGGT i otoGar3.GL873829 I 1 I 3 s mm10.chr16 65437794 111 - 98207768 ---GGGACAGTGGCAAGGTCTTCAG--------------------------ACCTTCCCAAGGATGCATAAGA------TCCTACAAGCATAAGGGAGAC-------AACACAGCAGCTCCCTCACT---------------------------------------------------------------------------------------GACCTGCCCCAGTGGCCTG-AGGACCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29073989 144 + 31377067 GGGACCGCA---CCAGAATCCTCAGCACTTCCTCCTGGCCTTTCCACTCCTCCCTCACAAAGGATG---GAGGTCCGG-TCCCACAGGCCTGAGGGACACGACGCTTTCCATCCCGCCCAGC---CG---------------------------------------------------------------------------------------CACCTGCCCCGAGGACCCT-CAAGCCCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899226 71 + 6579706 CGGATGGCA---TCAGAATCCTCAG--------------------------TCTC-------------------CTGCCTCCCTCA---------------------------------TCC---TG---------------------------------------------------------------------------------------GCCCTGCCCCATATGCCTTGAGGACACT i dasNov3.JH569502 C 0 I 3 e proCoq1.NW_012133858v1 7423625 142 + 22200726 I e micMur3.chr1 25908704 142 - 114275543 I a score=2364314.000000 s hg38.chr3_KI270779v1_alt 131968 148 + 205312 GCCCAGACTCACAGGTCATTCCAAAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCTGGATTGTTATTCCAGACCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACCCTGGG s panTro5.chr3 200121251 148 + 202621043 GCCCAGACTCACAGGCCATTCCAAAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCAGATTGTTATTCCAGACCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACCCTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96242 148 + 190779 GCCCAGACTCACAGGCCATTCCAAAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCAGATTGTTATTCCAGACCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACCCTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39386 148 - 55620 GCCCAGACTCACAGGTCATTCCAAAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACCCTGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886528 148 + 123690457 GCCCAGACTCACAGGTCATTCCATAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGGATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGAGCCCTGAAGGA----CAGAGTGGGAGGTTGGCCACCCTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469391 152 + 204787373 GCCCAGACTCACAGGTCATTCCGTAGTGGAAAAGCGTCTCCTCAGAGCTCCCTGGGGGGACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76631 152 + 192460366 GCCCAGACTCACAGGTCATTCCGTAGTGGAAAAGCGTCTCCTCAGAGCTCCCTGGGGGGACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552409 152 + 19675229 GCCCAGACTCACAGGTCATTCCGTAGTGGAAAAGCATCTCCTCAGAGCTCCCTGGGGGGACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491579 152 + 16847902 GCCCAGACTCACAGGTCATTCCGTAGTGGAAAAGCGTCTCCTCAGAGCTCCCTGGGGGGACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425246 152 - 91754291 GCCCAGACTCACAGGTCATTCCGTAGTGGAAAAGCGTCTCCTCGGAGCTCCCTGGGGGAACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 594170 152 - 1977891 ACCCAGACTCACAGGTCATTCCGTAGTGGAAAAGCGTCTCCTCAGAGCTCCCTGGGGGCACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTGCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 461085 148 + 7796314 GCCCAGACTTACAGGTCATTCCGTAGTGGAAAAGCATCTCCTCAGAGCTCCCTGGGGGAATGATGGAGCCATTGGGCATCCGGAAGTCGTCCTCGGGATTGTTATTCCAGACTCCTGAGAGA----CAGAGTGGGAGGTTGGCCACCCCGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 942920 148 - 74750902 GCCCAGACTCACAGGTCATTCCATAGTGGAAAAGCGTGGCCTCAGAGCTACTTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGATCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACGCTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467715 148 + 17725628 GCCCAGACTCACAGGTCATTCCATAGTGGAAAAGCATGGCCTCAGAGCTGCTTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGGTTGTTATTCCAGATCCCTGAGGGA----CAGAGTGGGAGGTCGGCCACGCTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431777 148 - 6778120 GCCCAGACTCACAGGTCATTCCATAGCGGAAAAGCGTGGCCTCAGAGCTGCTCAGGGGAATGGCGGAGCCGTTGGACATCCTGAAGTCGTCTTCCGGGTTGTCATTCCAGATCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACGCTGGG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25908846 148 - 114275543 GCCCAGACTCACAGGTCATTCCGTAGTGAAAAAGCGTCTCCTCAGAGCTCTCTGGGGAAAGGGTGGAGCCATTGGGCATCCTGAAGTCATCTTCTGGATTGTCGTTCCAGACCCCTAAGGGA----CAGAGCAGGAGGTTGACCACCCTGGG i micMur3.chr1 I 142 I 301 s proCoq1.NW_012133858v1 7423767 148 + 22200726 GCCCAGACTCACAGGTCATTCCGTAGTGAAAAAGCGCCTCCTCAGAGCTCCCTCGGGAAAAGGTGGAGCCATTGGGCATCCTGAAGTCGTCTTCTGGATTGTCATTCCAGACCCCTGAGGGA----CAGAGCAGGAGGTCGGCCACCCCGGG i proCoq1.NW_012133858v1 I 142 I 448 s otoGar3.GL873829 421873 148 - 608964 GTCCAGACTCACAGGTCATTCCATAGTGAAAAAGTATCTCCTCTGAGCTGTTTCCGGGTAAGGTAGACCCATTGGGCATCCTGAAGTCATCTTCTGGGTTGTCATTCCAGACCCCTGGGGAA----CAGAGTAGTAATTTGGCCACCCTGGG i otoGar3.GL873829 I 3 C 0 s mm10.chr16 65437905 146 - 98207768 --CCAGACTCACATGTCATTCCATAGTAGAAAAGGGTCTCCTCAGAGCTGTTTGAGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCATCTTCTGGATTGTCATTCCACACTCCTGTGAGA----CAGAGCAGGAGGTTCGATACCACAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29074133 146 + 31377067 --CCTCACTCACAGGTCATTCCGTAGTGAAAAAGTGAGGCCTCGCTGCTATTGCCGGGAATGCTGGAGCCATTGGGCATCCTGAAGTCGTCTCCTGGATTGCCATTCCAAACTCCTGAGGGA----CAGAACAGGAGGTTGGCCATCCTGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899300 132 + 6579706 GCCCAGACTTACAGGTCATTCCATAGTGAAAAATTGTCTCCTCAGTGCTCCCTTGGGGAATGATGGAACCATTGGGCATCCTGAAGTCATCATCTGGATTGCCATTCCAGACCCCTGAGGGA----TAGAGTAGAA---------------- i dasNov3.JH569502 I 3 C 0 a score=733208.000000 s hg38.chr3_KI270779v1_alt 132116 109 + 205312 CACGCGGCTGTCCCCTTCCTGGGGAGCATCCGGCGG---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCT-CTTGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG s panTro5.chr3 200121399 109 + 202621043 CACGCAGCTGTCCCCTTCCTGGGGAGCATCCGGCGG---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCT-CTTACA--CCTGCTATCAGGCC------TCCAGGGGAGCCGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96390 109 + 190779 CACGCAGCTGTCCCCTTCCTGGGGAGCATCCGGCGG---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCT-CTTGCA--CCTGCTATCAGGCC------TCCAGGGGAGCCGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39534 109 - 55620 CACGCGGCTGTCCCCTTCCTGGGGAGCATCCGGCGG---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCT-CTTGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886676 109 + 123690457 CACACGGCTGTCCCCTTCCTGGGGAGCATCCGGAGG---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCT-CCTGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469543 109 + 204787373 CACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGA---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCC-GTCGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76783 109 + 192460366 CACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGA---------ACGCCCTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-TGCC-GTCGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552561 107 + 19675229 CACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGA---------ACGCAGTGGGGAGAGGCCAGGGCCC--GGCAGCCTC-TGCC-GTCGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCG-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491731 109 + 16847902 CACACAGCCGTCCCCTTCCTGGGGAGCATCCAGTGA---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-GGCC-GTGGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425398 108 - 91754291 CACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGA---------ACACAGT-GGGAGAGGCCAGGGCCT--GGCAGCCTC-TGTC-GTGGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 594322 109 - 1977891 CACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGA---------ACGCAGTGGGGAGAGGCCAGGGCCT--GGCAGCCTC-GGCC-GTCGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 461233 98 + 7796314 CACACAGCTGTCCCGTTTCTGGGGAGCATCCAGTGA---------AAGCAGTGGGGAGA-------------GGCAGCCTC-TGCC-GTTGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943068 108 - 74750902 CATTCGGCTGTCCCCTTCCCCTCGAGCAT-CGGGGG---------ATGCAGGGAGGAGCAGCCAGGACCT--GGCAGCCTC-TGCC-TTTGCA--CCTGCTGTCAGGCC------TCCAGGGGAACCCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467863 83 + 17725628 CTCGCGGCTGTCCCCTT--CCTGGAGCAT-CGGGGG---------ACGCAGGGAGGAGCGGCCAGGGACC--GGCGGCCTC-TGCC-TCTGCA--CCTGCT----------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 431925 106 - 6778120 CACGCGGCTGTCCCCTTCCCGGCCCGCAT-CGGGGG---------ACGCAGGGAGGAGCGGCCGGGACCC--G--AGCTTC-TGCC-TTTGCA--CCTGCGGTCAGGCC------TCCAGGGGAGCTGGG i cebCap1.NW_016107444v1 C 0 I 256 s otoGar3.GL873829 422021 88 - 608964 AAGATGGGTCTCCATTGTCA----------CACTGG---------AGACA-TAAGGAGTAGGTGGGGCCT-GGGCAAC-------------CA--TCTGTTCTCAGGCT------TGGGAGAGGGATGGG i otoGar3.GL873829 C 0 I 5 s mm10.chr16 65438051 76 - 98207768 -------CTCACCTTCTCCCGGGG-GCATTCAATGG------------------------------------GGCAGCTGC-AACT-GTCCCAGGCCTAGGGTCGG--T------TCCAGGAGGTGGGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29074279 73 + 31377067 ------ACTGTGGCTCCCCCCGAG------------------------------------------------GGAAACCCC-TTCCAGTTGCA--TCTGTCCTTGGCCCAGTCCTTCCGGGGGAGGAGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899432 90 + 6579706 ----------------------GGAGCATCAAATAGGTCATATTCAAGATGTAAAGAGTAGGTGGGGCCCTGGGAAACCTCTTTCT-GTTGCA--TCTGT-------CC------TCCAG--GAGCAGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25908994 301 - 114275543 I a score=226527.000000 s hg38.chr3_KI270779v1_alt 132225 33 + 205312 ----AGGA-CGGGCCCTCACACCCT-GCCCGTCTGCCTT s panTro5.chr3 200121508 33 + 202621043 ----AGGA-CGGGCCCTCACACCCT-GCCCATCTGCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96499 33 + 190779 ----AGGA-CGGGCCCTCACACCCT-GCCCATCTGCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39643 33 - 55620 ----AGGA-CGGGCCCTCACACCCT-ACCCATCTGCCTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886785 33 + 123690457 ----AGGA-CGGGCCCTCACACCCT-GCCCGTCTGCCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469652 33 + 204787373 ----AGGA-CGGGCCCTCACACCCT-GCCCAGCTGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76892 33 + 192460366 ----AGGA-CGGGCCCTCACACCCT-GCCCGGCTGCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552668 32 + 19675229 -----GGA-CGGGCCCTCACACCCT-GCCCGGCTGCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491840 33 + 16847902 ----AGGA-CCGGCCCTCACACCCT-GCCCGGCTGCCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425506 33 - 91754291 ----AGGA-CGGGCCCTCACAGCCT-GCGCGGCTGCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 594431 33 - 1977891 ----AGGA-CCGGCCCTCACACCCT-GCCCGGCTGCCTT i manLeu1.NW_012102020v1 C 0 T 4962 s colAng1.NW_012118932v1 461331 31 + 7796314 ----ACGA-CGGGCCCTCAC--CCT-GCCGGTCTGCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943176 33 - 74750902 ----AGGACCGGGCCTTCATGCGCT-GCCCCTCTGCTT- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 422114 33 - 608964 ----GGGACCAGGCCCTCACA-CCT-GCCCCTCTGCTTT i otoGar3.GL873829 I 5 I 2 s mm10.chr16 65438127 34 - 98207768 ----AGGACCATGCACTCATACCCT-GCCATTGTGCTTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29074352 31 + 31377067 ----AGGA-CCGTACCTCATAGCCC-ACCC-TCTGTCC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899522 38 + 6579706 AACAAGAC-CATGACCTCAAAATCTGGCCCCTCTGCTTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25908994 301 - 114275543 I e cebCap1.NW_016107444v1 432031 256 - 6778120 I e saiBol1.JH378146 467946 0 + 17725628 C a score=426986.000000 s hg38.chr3_KI270779v1_alt 132258 81 + 205312 CGGGAGGGGCGGGAGGAAACGCG----------GGCAGCGGTGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------GGAGAAAG-GATG s panTro5.chr3 200121541 81 + 202621043 CGGGAGGGGCGGGGGGAAACGCG----------GGCCCCGGTGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------CGAGAAAG-GATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96532 81 + 190779 CGGGAGGGGCGGGGGGAAACGCG----------GGCCCCGGTGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------CGAGAAAG-GATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39676 81 - 55620 CGGGAGGGGCGGGAGGAAACGCG----------GGCAGCGGTGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------GGAGAAAG-GATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886818 81 + 123690457 Cgggaggggcgggaggaaacgca----------ggcagcgatggaggagggcggga-gga-------------------------------tgtggg------aggcaagaggaaag--------------ggagAAAG-GATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469685 80 + 204787373 CGGGAGGGGTGGGAGG-AACGCG----------GGCAGCCATGGAAGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------GGCCAAAG-GATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 76925 81 + 192460366 CAGGAGGGGTGGGAGGAAACTCG----------GGCAGCCATGGAGGAGGGAGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------GGCCAAAG-GATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552700 81 + 19675229 CAGGAGGGGTGGGAGGAAACTCG----------GGCAGCCATGGAGGAGGGCGGGA-GGA-------------------------------TGTGGA------AGGCAAGAGGAAAG--------------GGCCAAAG-GATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491873 80 + 16847902 CGGGAGGGGTGGGAGG-AACGCG----------GGCAGCCATGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------GGCCAAAG-GATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425539 80 - 91754291 CGGGAGGGGTGGGAGG-AACGCG----------GGCAGCCATGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCCAGAGGAAAG--------------GGCCAAAG-GATG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461362 81 + 7796314 CGGGAGGGGTGGGAGGAAACGCG----------GGCAGCCATGGAGGAGGGCGGGA-GGA-------------------------------TGTGGG------AGGCAAGAGGAAAG--------------GGCGAAAG-GATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943209 81 - 74750902 AGGGAGGGTCGGCGGGAAACACT----------GGCAGAGATACAGGAGGACAGGAAGGA-------------------------------TGTGGG------AGGCAAGAAGAAAG--------------GAGG-AAG-GACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 467946 71 + 17725628 -----GGGTCTGCAGGGAATGCG----------GGC--AGATGCCGG-GGACGGGAGGGA-------------------------------CGTAGG------GGGCAGGGAGGAAG--------------GAGG--AG-GAC- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 422149 96 - 608964 GGAGAGGGGCAGAAGAAAGCACA----------ACAGGAGCTTGAGGCAGGCAAGAGAAA-------------------------------TGTGAG------GAACAGAGGGAAGGATGGAGAGACAGAAGGGTAGAG-GAAG i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65438161 111 - 98207768 --aaaaaaggagaagaaagccaa----------gaagaatgtgggggaagatggga-ggaaggaaggagacaagactaaaaacaggaaaagtaggga------agggaaggggaggg--------------gaggaaggaGAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29074383 62 + 31377067 Cggggatgaagaggggaaatgga----------ggcgggggtggaggaagaagggg-cgc--------------------------------------------------------g--------------ggagggag-ggCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3899560 95 + 6579706 -AGGGAGGGAGGGAAGAGGTTCGATGAGAAAATGGAGGAAATGGAAGAAGAGAAG--GTA-------------------------------TGTGGGCAGATAAGGAGAAAGGAAAG--------------GTGTGAGG-GATG i dasNov3.JH569502 C 0 I 1018 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25908994 301 - 114275543 I e cebCap1.NW_016107444v1 432031 256 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=293337.000000 s hg38.chr3_KI270779v1_alt 132339 50 + 205312 G---------CTGTG------CC-CCCCGCCTCCCCGCAGCCC-CCCCTGATGCTCCCTTAGAGCGG s panTro5.chr3 200121622 51 + 202621043 G---------CTGTG------CC-CCCCGCCTCCCCGCAGCCCACCCCTGATGCTCCCTTAGCGCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96613 51 + 190779 G---------CTGTG------CC-CCCCGCCTCCCCGCAGCCCACCCCTGATGCTCCCTTAGAGCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39757 52 - 55620 G---------CTGTG-----CCC-CCCCGCCTCCCCACAGCCCACCCCTGATGCTCCCTTAGAGCGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886899 51 + 123690457 G---------CTGTG------CC-CCCCGCCTCCCCGGAGCCCATCCCTGATGCTCCCTTAGAGCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469765 56 + 204787373 G---------CTGTG-ACCCCGC-CCCCGACTCCCTGGAGCCCACCCCTGATGCTCCCTTAGAGCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77006 56 + 192460366 G---------CTGTG-ACCCCGC-CCCCGACTCTCCGGGGCCCACCCCTGATGCTCCCTTAGAGCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552781 56 + 19675229 G---------CTGTG-ACCCCGC-CCCCGACTCTCCGGAGCCCACCCCTGATGCTCCCTTAGAGCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 491953 56 + 16847902 G---------CTGTG-ACCCCGC-CCCCGACTCCCCGGAGCCCACCCCTGATGCTCCCTTAGAGCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425619 56 - 91754291 G---------CTGCG-ACCCCGC-CCCCGACTCCCCGGAGCCCGCCCCTGATGCTCCCTTAGAGCGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461443 57 + 7796314 G---------CTGTGCCCCCCGC-CCCCGACTCCCCGGAGCCCACCCCTGATGCTCCCTTAGAGCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943290 57 - 74750902 G---------CAGCG-GCCGCCACCCCCGCCTCCCTGGAGCACACCCCTGATGCTCCCTTAGAGCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468017 56 + 17725628 G---------CAGGA-ACCCCCA-CCCCGCCTCGCCGGGGCGCACCCCTGAGGCTCCCTTAGGGCGG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 422245 59 - 608964 GAGGCAGGCACTGTG------CC-CTCATCCTGTCCAGAGCCT-TCCTTGATGCTCCATTGGAGTGG i otoGar3.GL873829 C 0 M 235 s mm10.chr16 65438272 50 - 98207768 G---------CTGAG------CC-GCCACTTTCCCCATAGCATTTCCTTCATATTCCCTTAAAAAA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29074445 37 + 31377067 T---------CCCAG------AG-CCCATCCTCC---AAGCCC-CCCTGGCTGCCCT---------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25908994 301 - 114275543 I e dasNov3.JH569502 3899655 1018 + 6579706 I e cebCap1.NW_016107444v1 432031 256 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=119941.000000 s hg38.chr3_KI270779v1_alt 132389 23 + 205312 GCGGAGGACAGGAAGGGAGCCTC s panTro5.chr3 200121673 23 + 202621043 GAGGAGGACAGGAAGGGAGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96664 23 + 190779 GAGGAGGACAGGAAGGGAGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39809 23 - 55620 GAGGAGGACAGGAAGGGAGCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886950 23 + 123690457 GAGGAGGACAGGAAGGGAGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469821 23 + 204787373 GAGGTGGCCAGAAAGGGTGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77062 23 + 192460366 GAGGTGGCCAGAAAGGGTGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552837 23 + 19675229 GAGGTGGCCAGAAAGGGTGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492009 23 + 16847902 GAGGTGGCCAGAAAGGGTGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425675 23 - 91754291 GAGGTGACCAGAAAGGGTGCCTC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461500 23 + 7796314 GAGGTGACCGGAAAGGGTGCCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943347 23 - 74750902 GAGGAGGGCAGGAAGGGAGACTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468073 22 + 17725628 GATGGGGGCAGGAA-GGAGCCTC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65438322 23 - 98207768 ATGCCAAGCAGGAAATTAGCCTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29074482 13 + 31377067 ----------GAACCGGAGCTTT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25908994 301 - 114275543 I e otoGar3.GL873829 422304 235 - 608964 M e dasNov3.JH569502 3899655 1018 + 6579706 I e cebCap1.NW_016107444v1 432031 256 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=197044.000000 s hg38.chr3_KI270779v1_alt 132412 40 + 205312 GGGGGAGGCTGGA--GAAGCCCCTCGGCTCCCGGCCCGCTCT s panTro5.chr3 200121696 40 + 202621043 GGGGGAGGCTGGA--GAAGCCCTTCGGCTCCGCGCCCGCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96687 40 + 190779 GGGGGAGGCTGGA--GAAGCCCTTCGGCTCCGCGCCCGCTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39832 40 - 55620 GGGGGAGGCTGGA--GAAGCCCCTCGGCTCCCGGCCCGCTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120886973 40 + 123690457 GGGGGAGGCTGGA--GAAGCCCCTCGGCTCCCGGCCCGCTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469844 40 + 204787373 GGTGGCGGCTGGA--GAAGCCCCTCCGCTCCCGGCCCGCTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77085 40 + 192460366 GGTGGCGGCTGGA--GAAGCCCCTCCGCTCCCGGCCCGCTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552860 40 + 19675229 GGTGGCGGCTGGA--GAAGCCCCTCCGCTCCCGGCCCGCTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492032 40 + 16847902 GGTGGCGGCTGGA--GAAGCCCCTCCGCTCCCGGCCCGCTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425698 40 - 91754291 GGTGGCGGCTGGA--GAAGCCCCTCCGCTCCCGGCCCGCTCC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461523 40 + 7796314 GGTGGAGGCTGGA--GAAGCCCCTCCGCTCCCGGCCCGCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943370 38 - 74750902 ATCGGAGGCTGGA--GAAGTCCCTC--CCCTAGGCCCGCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468095 37 + 17725628 CGCGGAGGCGGGA--GGAGTCCC-C--CCCAAGGCCCGCTCG i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65438345 26 - 98207768 AACAGTGTGTGAA--GCAGCCCCTC--------------TCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29074495 6 + 31377067 AG-------------GAAG----------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3900673 42 + 6579706 ggaggaaactaaaacaAATCTCCTACTTCCCTGGCCTATTGT i dasNov3.JH569502 I 1018 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25908994 301 - 114275543 I e otoGar3.GL873829 422304 235 - 608964 M e cebCap1.NW_016107444v1 432031 256 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=278419.000000 s hg38.chr3_KI270779v1_alt 132452 38 + 205312 GTGCCCCAAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG s panTro5.chr3 200121736 38 + 202621043 GTGCCCCGAGGGTTCTGCTCCAAGGAGGCCGAGAAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96727 38 + 190779 GTGCCCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39872 38 - 55620 GTGCCCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887013 38 + 123690457 GTGCCCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469884 37 + 204787373 GTG-CCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77125 37 + 192460366 GTG-CCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552900 37 + 19675229 GTG-CCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492072 37 + 16847902 GTG-CCCGAGGGTTCTGCTCCAAGGAGGCGCAGAAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425738 38 - 91754291 GTGCCCCGAGGGCTCTGCTCCAAGGAGGCGGAGGAAGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461563 38 + 7796314 GTGCCCCGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943408 38 - 74750902 GTGCCCCGAGGGTTCTGCTCCGAGGAGGCCGGGAAAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468132 23 + 17725628 GTGCTGCG---------------GGAGGCGGGGACAGG i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25909295 38 - 114275543 GTGCCCTAAAGGTTCTGCTCCAAGGAGGCTGAGAGAGG i micMur3.chr1 I 301 I 103 s mm10.chr16 65438371 22 - 98207768 GTGCCCT---------------AGGGGACTGAGGAAG- i mm10.chr16 C 0 C 0 s canFam3.chr33 29074501 15 + 31377067 -----CCAAAGGCTC------------------ACAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3900715 38 + 6579706 GTACCCTGAGGGTTCTGTTCCAAGGAGGCTGAGGAAGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e otoGar3.GL873829 422304 235 - 608964 M e cebCap1.NW_016107444v1 432031 256 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=183270.000000 s hg38.chr3_KI270779v1_alt 132490 67 + 205312 GAGGCCGAGCA-GGGCTGCCCG--GG---CCGCCGGCGTGGGGG---------TCCGAGCTCCGGCTGGCTCCG--CGGAGCCT s panTro5.chr3 200121774 67 + 202621043 GAGGCCGAGCA-GGGCTGCCCG--GG---CCGCCGGCGTGGGGG---------TCCGAGCTCCGGCTGGCTCCG--CGGAGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96765 67 + 190779 GAGGCCGAGCA-GGGCTGCCCG--GG---CCGCCGGCGTGGGGG---------TCCGAGCTCCGGCTGGCTCCG--CGGAGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39910 67 - 55620 GAGGCCGAGCA-GGGCTGCCCG--GG---CCGCCGGCGTGGGGG---------TCCGAGCTCCGGCTGGCTCCG--CGGAGCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887051 67 + 123690457 GAGGCCGAGCA-GGGCTGCCCG--GG---CCGCGGGCGTGGGGG---------TCCGAGCTCCGGCTGGCTCCG--AATAGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469921 64 + 204787373 GAGGCCGAGCA-GGGCTGCCCG--GGC--CCGCGGGCGTGGGGG---------TCCGAGCTCC----GGCTCCG--TAGAGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77162 64 + 192460366 GAGGCCGAGCA-GGGCTGCCCG--GGC--CCGCGGGCGTGGGGG---------TCCGAGCTCC----GGCTCCG--TAGAGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 552937 64 + 19675229 GAGGCCGAGCA-GGGCTGCCCG--GGC--CCGCGGGCGTGGGGG---------TCCGAGCTCC----GGCTCCG--TAGAGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492109 64 + 16847902 GAGGCCGAGCA-GGGCTGCCCG--GGC--CCGCGGGCGTGGGGG---------TCCGAGCTCC----GGCTCCG--TAGAGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425776 62 - 91754291 GAGGCCGAGCA---GCTGCCCG--GGC--CCGCGGGCGTGGGGG---------TCCGAGCTCC----GGCTCCG--TAGAGCCT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461601 64 + 7796314 GAGGCCGAGCA-GGGCTGCCCG--GGC--CCGCGGGCGTGAGGG---------TCCGAGCTCC----GGCTCCG--CAGAGCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943446 39 - 74750902 GAAGCC-------------------------------TTCGGGA---------ATCGACCTCC---TGCTGCCG--CAGAGCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468155 12 + 17725628 GAAGCC------------------------------------------------------------------------GAGCGC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65438393 42 - 98207768 --AACTGGGCA-GGGCAG---------------------GGAAG---------TCCAAAGGAGGGATAGCT---------GCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29074516 51 + 31377067 GAAGCTGAGAG-GTCTCGTCCC--CGCCGCCCCGGGCAGGGTGG---------TGCCAGCTTC--------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3900753 78 + 6579706 GAAACTCAGCCTGGGATGTCCACTGGC--CAACGGGAAAGCAAGCTGCCTTGCTCTGAGCTCC----TGCTGCAGCCACTACCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25909333 103 - 114275543 I e otoGar3.GL873829 422304 235 - 608964 M e cebCap1.NW_016107444v1 432031 256 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=121132.000000 s hg38.chr3_KI270779v1_alt 132557 18 + 205312 CAGAGGCA-GG--TCCGAGCC s panTro5.chr3 200121841 18 + 202621043 CAGAGGCA-GG--TCCGAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96832 18 + 190779 CAGAGGCA-GG--TCCGAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39977 18 - 55620 CAGAGGCA-GG--TCCGAGCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887118 18 + 123690457 CAGAGGCA-GG--TCCGAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202469985 18 + 204787373 CAGAGGCA-GG--TGCGCGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77226 18 + 192460366 CAGAGGCA-GG--TGCGCGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553001 18 + 19675229 CAGAGGCA-GG--TGCGCGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492173 18 + 16847902 CAGAGGCA-GG--TGCGCGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425838 15 - 91754291 CAGAGGCA-GG--TCCG---C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461665 18 + 7796314 CAGAGGCA-GG--TCCGCGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943485 18 - 74750902 CAGAGGCA-GG--TCTGAGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468167 18 + 17725628 GCGGGGCC-GG--TCTGAGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432287 18 - 6778120 CAGAGGCA-GG--TCCGAGCC i cebCap1.NW_016107444v1 I 256 C 0 s mm10.chr16 65438435 16 - 98207768 ---TGGTATAG--TCTGAGCT i mm10.chr16 C 0 I 2 s dasNov3.JH569502 3900831 20 + 6579706 CAGAGTCA-GGGTTCTGACCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25909333 103 - 114275543 I e otoGar3.GL873829 422304 235 - 608964 M e canFam3.chr33 29074567 0 + 31377067 C e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=428544.000000 s hg38.chr3_KI270779v1_alt 132575 43 + 205312 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC s panTro5.chr3 200121859 43 + 202621043 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96850 43 + 190779 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 39995 43 - 55620 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887136 43 + 123690457 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470003 43 + 204787373 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77244 43 + 192460366 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553019 43 + 19675229 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492191 43 + 16847902 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGCACTCGGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425853 43 - 91754291 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTCCTGGTACTCGGGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461683 43 + 7796314 GC---CCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGAACTCGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943503 43 - 74750902 GC---CCTCACCCAGGAGGCCCTCGGTGAGGTTCCAATACTCCTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468185 42 + 17725628 G----CCTCACCCAGGAGGCCCGCGGTGCGGCCCCGGTACCCCGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432305 43 - 6778120 GC---CCTCACCCAGGAGGCCCTCGGTGCGGTCCCGGTACTCCCGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 422548 43 - 608964 GC---TCATACCCAAGAGGCCTTCCGTGTGGTTTTGATACTCTTCC i otoGar3.GL873829 M 235 C 0 s mm10.chr16 65438453 44 - 98207768 GCA--TCTTACCCAGAAGGCCCTCTGTGTGGTTTCGATATTCCTCT i mm10.chr16 I 2 C 0 s canFam3.chr33 29074567 39 + 31377067 -------TCACCCAGGAGGCCCTCGGTGCGCCCCCGGTACTCCGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3900851 44 + 6579706 --GCTCCTTACCCAGGAGGCCCTCTGTGTGGTGTTGATACTCCTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7423915 448 + 22200726 I e micMur3.chr1 25909333 103 - 114275543 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=539688.000000 s hg38.chr3_KI270779v1_alt 132618 35 + 205312 GGGAGGCTGGCGGAGGCGTGGAGGATGTTGGAGAG s panTro5.chr3 200121902 35 + 202621043 GGGAGGCTGGCGGAGGCGTGGAGGATGTTGGACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96893 35 + 190779 GGGAGGCTGGCGGAGGCGTGGAGGATGTTGGAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40038 35 - 55620 GGGAGGCTGGCGGAGGCATGGAGGATGTTGGAGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887179 35 + 123690457 GGGAGGCTGGCGGAGGCGTGGAGGATGTTGGAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470046 35 + 204787373 GGGAGGCTGGCGGAGGCGTGGAGGATGTCGGAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77287 35 + 192460366 GGGAGGCTGGCGGAGGCGTGGAGGATGTCGGAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553062 35 + 19675229 GGGAGGCTGGCGGAGGCGTGGAGGATGTCGGAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492234 35 + 16847902 GGGAGGCTGGCGGAGGCGTGGAGGATGTCGGAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425896 35 - 91754291 GGGAGGCTGGCGGAGGCGTGGAGGATGCCGGAGAG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461726 35 + 7796314 GGGAGGCTGGCGGAGGCGTGGAGGATGGCGGAGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943546 35 - 74750902 GGGAGGCTGGCGGAGGCGTGGAGGATGCTGGAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468227 35 + 17725628 GGGAGGCTGGCGGCCGCGTGGAGGACGCCGGAGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432348 35 - 6778120 GGGAGGCTGGCGGAGGCGTGGAGGGCGCTGGAGAG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25909436 35 - 114275543 GGGAGGCTGGAGGAGGCATGGAGGATGTTGGAGAG i micMur3.chr1 I 103 I 517 s proCoq1.NW_012133858v1 7424363 35 + 22200726 GGGAGGCTGGAGGAGGCGTGGAGGATGTTGGAGAG i proCoq1.NW_012133858v1 I 448 C 0 s otoGar3.GL873829 422591 35 - 608964 GGGAGACTGGTAAAGGCATGGAGGATGTTGGAGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438497 35 - 98207768 GATAGGCTGGAGGAGGCATGAAGGATGTTGGAGCG i mm10.chr16 C 0 C 0 s canFam3.chr33 29074606 35 + 31377067 GGGAGGCCGCACGAGGCGTGGAGGATGTTGGACAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3900895 35 + 6579706 GGGAGGCTGGAGGAAGCATGGAGGATGTTGGAGAG i dasNov3.JH569502 C 0 C 0 e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=1022004.000000 s hg38.chr3_KI270779v1_alt 132653 90 + 205312 CGCGATCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCTCAGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGAACGT s panTro5.chr3 200121937 90 + 202621043 CGCGATCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCTCAGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGTGTTGAACGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 96928 90 + 190779 CGCGATCACCGAGACAGTGGCCCAGCCGTCGAAGCTGGCCGAGACCTCAGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGAACGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40073 90 - 55620 CGCGATCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCTCAGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGAACGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887214 90 + 123690457 CGCGGTCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCACAGAGCCGTTGCGGCTCAGGAAGACTCCGGTGGCGTTGAACGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470081 90 + 204787373 CGCGATCACCGAGACGGCGGCCCAGCCGTCGAAGCTGGCAGAGACCACGGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGACCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77322 90 + 192460366 CGCGATCACCGAGACGGCAGCCCAGCCGTCGAAGCTGGCAGAGACCACGGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGACCGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553097 90 + 19675229 CGCGATCACCGAGACGGCGGCCCAGCCGTCGAAGCTGGCAGAGACCACGGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGACCGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492269 90 + 16847902 CGCGATCACCGAGACGGCGGCCCAGCCGTCGAAGCTGGCAGAGACCACGGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGACCGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 425931 90 - 91754291 CGCGACCACCGAGACGGCGGCCCAGCCATCGAAGCTGGCAGAGACCACGGAGCCGCTGCGGCTCAGGACGACTCCGGTGGCGTTGACCGT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461761 90 + 7796314 CGCGATCACCGAGACGGCGGCCCAGCCGTCGAAGCTGGCAGAGACCACGGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGAACGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943581 90 - 74750902 CGCCGTCACCGAGACCGTGGCAGAGCCGTCGAAGCTGGCCGAGACCTCGTGGCCGCTGTGGCTCAGGAGGACTCCGGGGGCGCTGACCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468262 90 + 17725628 CGCGGTCACTGAGACCGCGGCAGAGCCATCGAAGCTGGCCGAGACCCCGGGGCCGCTGCGGCTCAGGAGGACTCCGGGGGCGCTGAACGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432383 90 - 6778120 CGCGGTCACTGAGACCGCGGCGGAGCCGTCGAAGCTGGCCGAGACCTCGGGGCCGCTGCGGCTCAGCAGGACTCCGGGGGCGCTGAACGT i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7424398 90 + 22200726 AGCGGTCACTGTGATGGCTGTCGTCCCATCGAAGCTTGCTGACACCATGGAGCCGTTGCGGGTCAGGAGGACCCCGGTGGCATTGAATAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 422626 90 - 608964 AGCAGTCACTGAGATGGCTGCCGTCCCGTCGAAGCTGGCTGAGACCAGGGAGCCATTGCGGGTCAGGAGGACACCAGTGGCATTGAATAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438532 90 - 98207768 AGCAATCACAGAGATAGTCACTGTCCCATCAAAGTTGGCTGAGACTTGGGAGCCATTTTGGGTCAGCAGAACACCGGTGGTATTGAATAT i mm10.chr16 C 0 I 351 s canFam3.chr33 29074641 90 + 31377067 GGCCCTCACCGAGACGGCCACCGCCCCGTCGAAGGCGGCCGACACCACGGAGCCCGCGCGGGTCACCGTGACGCCGGTGCTGTTGAATGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3900930 90 + 6579706 AGCCAAAACTGAGATGGTCACCATTCCATCGAAGTTGGCTGATACCAGAGAGCCATTGCGGGTCAGGATGACACCGGAGGTGTTGAATAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25909471 517 - 114275543 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=264732.000000 s hg38.chr3_KI270779v1_alt 132743 25 + 205312 CTCCTGGCCTGGAGCATCGGGAGGC s panTro5.chr3 200122027 25 + 202621043 CTCCTGGCCTGGAGCATCGGGAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97018 25 + 190779 CTCCTGGCCTGGAGCATCGGGAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40163 24 - 55620 CTCCTGGCCTGGAGCATCGGG-GGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887304 25 + 123690457 CTCCTGGCCTGGAGCATCGGGAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470171 25 + 204787373 CTCCTGGCCTGGAGCATCGGGAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77412 25 + 192460366 CTCCTGGCCTGGAGCATCGGGAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553187 25 + 19675229 CTCCTGGCCTGGAGCATCGGGAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492359 25 + 16847902 CTCCTGGCCTGGAGCATCGGGAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426021 25 - 91754291 CTCCTGGCCTGGAGCATCGGGAGGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461851 25 + 7796314 CTCCGGGCCTGGAGCATCGGGAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943671 25 - 74750902 CTCTGGGCCTGGAATTCCGGGAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468352 25 + 17725628 CTCCGGGCCTGGAACACAGGGAGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432473 25 - 6778120 CTCCGGGCCTGGAGCACGGGGAGGC i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7424488 25 + 22200726 CTCCCGGTCTAGAACATTGGGAGGC i proCoq1.NW_012133858v1 C 0 I 425 s otoGar3.GL873829 422716 25 - 608964 CTCCCAGCCTAGAACATTGAGGGGT i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29074731 24 + 31377067 CTCCCGGCCTGGA-CGTGGGGAGAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901020 25 + 6579706 CTCCTGGCCTAGAACATTGGGAGAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=108429.000000 s hg38.chr3_KI270779v1_alt 132768 16 + 205312 AGCGGAGAGGAAGCCA s panTro5.chr3 200122052 16 + 202621043 AGCGGAGAGGAAGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97043 16 + 190779 AGCGGAGAGGAAGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40187 16 - 55620 AGCGGAGAGGAAGCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887329 16 + 123690457 AGCGGAGAGGAAGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470196 16 + 204787373 CGCGGAGAGGAAGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77437 16 + 192460366 CGCGGAGAGGAAGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553212 16 + 19675229 CGCGGAGAGGAAGCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492384 16 + 16847902 CGCGGAGAGGAAGCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426046 16 - 91754291 CGCGGAGAGGAAGCCA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461876 15 + 7796314 CGCGGGGAGG-AGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943696 15 - 74750902 AGCTGA-AGGACACCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468377 16 + 17725628 AGCCAAGAGGAAGCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432498 16 - 6778120 AGCTGAAACGAAGCCA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 422742 16 - 608964 GGTGAGAACGCAGCCA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29074755 13 + 31377067 ---AGATGGGGAGCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901045 14 + 6579706 --AGATGAGGAAGTAA i dasNov3.JH569502 C 0 I 312 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=27754.000000 s hg38.chr3_KI270779v1_alt 132784 6 + 205312 G-GTCGG s panTro5.chr3 200122068 6 + 202621043 G-GTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97059 6 + 190779 G-GTCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40203 6 - 55620 G-GTTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887345 6 + 123690457 G-GTCGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470212 6 + 204787373 G-GTCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77453 6 + 192460366 G-GTCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553228 6 + 19675229 G-GTCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492400 6 + 16847902 G-GTCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426062 6 - 91754291 G-GTCGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461891 6 + 7796314 G-GTCGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 943711 6 - 74750902 G-ATCCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468393 5 + 17725628 G-ATCC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 432514 6 - 6778120 G-GTCGG i cebCap1.NW_016107444v1 C 0 I 617 s otoGar3.GL873829 422758 7 - 608964 GCATTGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29074768 3 + 31377067 G-GG--- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=60866.000000 s hg38.chr3_KI270779v1_alt 132790 11 + 205312 CAccacggccc s panTro5.chr3 200122074 11 + 202621043 CAccacggccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97065 11 + 190779 CAccacggccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40209 11 - 55620 CAccacggccc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887351 11 + 123690457 CACCGCGGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470218 11 + 204787373 CACCGCGGCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 77459 11 + 192460366 CACCGCGGCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553234 11 + 19675229 CACCGCGGCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492406 11 + 16847902 CACCGCGGCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426068 11 - 91754291 CACCGCGGCCC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 461897 11 + 7796314 CATCGCGGCCC i colAng1.NW_012118932v1 C 0 M 965 s calJac3.chr17 943717 11 - 74750902 ACACGCAGACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468398 11 + 17725628 ACCCGCGGACC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 422765 11 - 608964 CACCCTGGAGG i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074771 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=48506.000000 s hg38.chr3_KI270779v1_alt 132801 11 + 205312 gcaccaaaccc s panTro5.chr3 200122085 11 + 202621043 gcaccaaaccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97076 11 + 190779 gcaccaaaccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40220 11 - 55620 gcaccaaaccc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887362 11 + 123690457 CCACCAAATCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470229 11 + 204787373 CCACCAGACCC i rheMac8.chr2 C 0 I 120 s macFas5.chr2 77470 11 + 192460366 CCACCGAACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553245 11 + 19675229 CCACCGAACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492417 11 + 16847902 CCACCGAACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426079 11 - 91754291 CCACCGAACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943728 10 - 74750902 -TGCCAGACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468409 10 + 17725628 -CGACAGACAC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 422776 11 - 608964 CCACCGCACCT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074771 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=3321.000000 s hg38.chr3_KI270779v1_alt 132812 1 + 205312 g s panTro5.chr3 200122096 1 + 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97087 1 + 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40231 1 - 55620 g i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887373 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 77481 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553256 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492428 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426090 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 422787 1 - 608964 A i otoGar3.GL873829 C 0 I 247 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074771 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943738 0 - 74750902 C e saiBol1.JH378146 468419 0 + 17725628 C e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e rheMac8.chr2 202470240 120 + 204787373 I a score=22786.000000 s hg38.chr3_KI270779v1_alt 132813 7 + 205312 cgccctg s panTro5.chr3 200122097 7 + 202621043 cgccctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97088 7 + 190779 cgccctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40232 7 - 55620 cgccctg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887374 7 + 123690457 GGCCCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 77482 7 + 192460366 CGCCCTG i macFas5.chr2 C 0 M 584 s macNem1.NW_012014355v1 553257 7 + 19675229 Cgccctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492429 7 + 16847902 CGCCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426091 7 - 91754291 CGCCCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943738 7 - 74750902 CTTCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468419 7 + 17725628 CTGCCAG i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29074771 1 + 31377067 ------G i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e rheMac8.chr2 202470240 120 + 204787373 I a score=40112.000000 s hg38.chr3_KI270779v1_alt 132820 14 + 205312 ccgggcccgcacca s panTro5.chr3 200122104 14 + 202621043 cctggcccgcacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97095 14 + 190779 cctggcccgcacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40239 14 - 55620 cctggcccgcacca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887381 14 + 123690457 CCCGGCCGGCACCA i nomLeu3.chr11 C 0 I 379 s macNem1.NW_012014355v1 553264 14 + 19675229 cccggcccgcacca i macNem1.NW_012014355v1 C 0 I 19 s cerAty1.NW_012004056v1 492436 14 + 16847902 CCCGGCCCGCACCA i cerAty1.NW_012004056v1 C 0 M 197 s chlSab2.chr15 426098 14 - 91754291 CCCGGCCCGCACCC i chlSab2.chr15 C 0 I 1 s calJac3.chr17 943745 13 - 74750902 -CCGGGCCACACCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468426 13 + 17725628 -CCGGGCTCCACCA i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29074772 5 + 31377067 CCGGG--------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e macFas5.chr2 77489 584 + 192460366 M e rheMac8.chr2 202470240 120 + 204787373 I a score=18176.000000 s hg38.chr3_KI270779v1_alt 132834 12 + 205312 cccccaccccgc s panTro5.chr3 200122118 12 + 202621043 cccccaccccgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97109 12 + 190779 cccccaccccgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40253 12 - 55620 cccccaccccgc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887774 12 + 123690457 CCCCCACCCCGC i nomLeu3.chr11 I 379 C 0 s macNem1.NW_012014355v1 553297 12 + 19675229 ccctccccctgc i macNem1.NW_012014355v1 I 19 I 11 s chlSab2.chr15 426113 12 - 91754291 Gcctccccctgc i chlSab2.chr15 I 1 I 23 s calJac3.chr17 943758 8 - 74750902 --CCTCCCTC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468439 8 + 17725628 --CCTGCCTC-- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29074777 7 + 31377067 -----ACCCCGC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e macFas5.chr2 77489 584 + 192460366 M e rheMac8.chr2 202470240 120 + 204787373 I a score=36109.000000 s hg38.chr3_KI270779v1_alt 132846 12 + 205312 cccTGGGGCTGA s panTro5.chr3 200122130 12 + 202621043 cccTGGGGCTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97121 12 + 190779 cccTGGGGCTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40265 12 - 55620 cccTGGGGCTGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887786 12 + 123690457 CCCCAGGGCTGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78076 12 + 192460366 CCCCGGGACTGA i macFas5.chr2 M 584 C 0 s macNem1.NW_012014355v1 553320 12 + 19675229 ccccGGGACTGA i macNem1.NW_012014355v1 I 11 C 0 s chlSab2.chr15 426148 12 - 91754291 ccccGGGGCTGA i chlSab2.chr15 I 23 C 0 s calJac3.chr17 943766 12 - 74750902 CCCCGAGGCTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468447 11 + 17725628 GCCGGA-GCTGA i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29074784 6 + 31377067 ------GGCCCA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e rheMac8.chr2 202470240 120 + 204787373 I a score=147650.000000 s hg38.chr3_KI270779v1_alt 132858 40 + 205312 -AGCCGGGAGGGGTCTGCACTGGAGGC-GGAGAA--GAGGCCGG- s panTro5.chr3 200122142 40 + 202621043 -AGCCGGGAGGGGTCTGCGCTGGAGGC-GGAGAA--GAGGCCAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97133 40 + 190779 -AGCCGGGAGGGGTCTGCACTGGAGGC-GGAGAA--GAGGCCAG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40277 40 - 55620 -AGCCGGGAGGGGTCTGCACTGGAGGC-GGAGAA--GAGGCCTG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887798 40 + 123690457 -AGCCGGGAGGGATCTGCACTGGAGGC-GGAGAA--GAGGCCGG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470360 41 + 204787373 -AGCCTGGAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGG- i rheMac8.chr2 I 120 C 0 s macFas5.chr2 78088 41 + 192460366 -AGCCTGGAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553332 41 + 19675229 -AGCCTGGAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGG- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426160 41 - 91754291 -AGCCGGGAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943778 43 - 74750902 -CACCCGGAGGGCTCCGCACTGGAGGCGGGAGAAGGGAGGCCGC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468458 42 + 17725628 -CACAGGGAGGGCCCCGCACTGGAGGCGGG-GAAGGGAGGCCGG- i saiBol1.JH378146 C 0 I 34 s canFam3.chr33 29074790 30 + 31377067 AGACTTGG-------------GGGGGAAGGGGCA--GGGGCGGGG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=104628.000000 s hg38.chr3_KI270779v1_alt 132898 36 + 205312 CGA-GCTGCACGCCCCGCTCGGGGGT----AGAGGCTGCGC s panTro5.chr3 200122182 36 + 202621043 CGA-GCTGCAGGCCCCGCTCAGGGGT----AGAGGCTGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97173 36 + 190779 CGA-GCTGCAGGCCCCGCTCAGGGGT----AGAGGCTGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40317 36 - 55620 CGA-GCTGCAGGCCCCGCTCGGGGGT----AGAGGCTGCGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887838 40 + 123690457 CGA-GCTGCAGGCCCCGCTGCGGGGGGTGAAGAGGCTGCGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470401 37 + 204787373 CGA-GCTGCAGGCCCCGCTCCGGGGA---AAGAGGCTGCGC i rheMac8.chr2 C 0 I 6 s macFas5.chr2 78129 37 + 192460366 CAA-GCTGCAGGCCCCGCTCCGGGGA---AAGAGGCTGCGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553373 37 + 19675229 CGA-GCTGCAGGCCCCGCTCCGGGGA---AAGAGGCTGCGC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426201 37 - 91754291 CGA-GCTGCAGGCCCCGCTCCGGGGA---AAGAGGCTGCGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943821 34 - 74750902 GGA-GCT-CAGGCCCGACTCCCAGGA-----AAGGCTGTCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074820 31 + 31377067 CGAGGCTCCGAGGGCCGCTTGGGGGC---------CTGGG- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=24083.000000 s hg38.chr3_KI270779v1_alt 132934 11 + 205312 TCTCTTGGCCC s panTro5.chr3 200122218 11 + 202621043 TCTCTTGGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97209 11 + 190779 TCTCTTGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40353 11 - 55620 TCTCTTGGCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887878 11 + 123690457 GCTCTTGGCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78166 11 + 192460366 GCACTTGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553410 11 + 19675229 GCACTTGGCCT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426238 11 - 91754291 GCACTGGACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943855 11 - 74750902 GCACTCGGCTC i calJac3.chr17 C 0 I 678 s canFam3.chr33 29074851 4 + 31377067 -------GCCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e rheMac8.chr2 202470438 6 + 204787373 I a score=55544.000000 s hg38.chr3_KI270779v1_alt 132945 50 + 205312 -----TGCACC--------GCCACGCACCGGGCCCTGCACCGCCACGCACCGGGCCCGGCACC s panTro5.chr3 200122229 28 + 202621043 -----TGCACC--------GCCACGCACCGGGCCCT----------------------GCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 97220 50 + 190779 -----TGCACC--------GCCACGCACCGGGCCCTGCACCACAACGCACTCGGCCCTGCACC i panPan2.chrUn_NW_014024201v1 C 0 M 1262 s gorGor5.CYUI01001831v1 40364 50 - 55620 -----TGCACC--------GCCACGCACTGGGCCCTCCACCGCCACGCACTGGGCCCTGCACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887889 31 + 123690457 -----TGCACC--------GCCACGCACCGGGCCCTGCACCGCC------------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78177 50 + 192460366 -----TGCACC--------GCCACGCACTGGACCCTGCACCGCAACGCGCTCGGCCCTGGATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553421 50 + 19675229 -----TGCACC--------GCCACGCACTGGACCCTGCACCGCAACGCGCTCGGCCCTGGATC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426249 28 - 91754291 -----TGCACC--------GCCACGCCCTGGACCCTGCAC----------------------C i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29074855 35 + 31377067 GGGGATGCCTTTCCCAGGGGCCCCGAGCCAAGCCC---------------------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e rheMac8.chr2 202470438 6 + 204787373 I a score=2431.000000 s hg38.chr3_KI270779v1_alt 132995 17 + 205312 ACAACGC---------ACTCGGCCCT s panTro5.chr3 200122257 17 + 202621043 ACAACGC---------ACCCGGCCCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40414 17 - 55620 ACAACGC---------ACTCGGCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887920 14 + 123690457 ---ACGC---------AGTCGGCCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78227 13 + 192460366 GCCACGC---------CCTGGA---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553471 17 + 19675229 GCTACGC---------CCTGGACCCT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426277 22 - 91754291 GCCACACNNNNNNNNNNCTGGA---- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29074890 17 + 31377067 ACAGGAC---------ACCCCTTCTT i canFam3.chr33 C 0 I 85 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e rheMac8.chr2 202470438 6 + 204787373 I a score=59573.000000 s hg38.chr3_KI270779v1_alt 133012 52 + 205312 GCACCGCCACGCACCGGGCCCTGCACCGCAACGCACCCGGCCCTGCACCGCA s panTro5.chr3 200122274 52 + 202621043 GCACCGCCACGCACCGGGCCCTGCACCACAACGCACCCGGCCCTGCACCGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40431 52 - 55620 GCACCGCAACGCACCGGCCCCTGCACCACAACGCACTGGGCCCTGCAACAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887934 52 + 123690457 GCACTGCCACGCACCGGGCCCTGCACCACAACGCACCCGGCCCGGCACCGCA i nomLeu3.chr11 C 0 T 111 s macFas5.chr2 78240 34 + 192460366 ------------------CCCTGCACCGCAACGCTCTGGGCCCTGCATGGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553488 52 + 19675229 GCACCGCAACGCGCTGGGCCCTGCACCGCAACGCTCTGGGCCCTGCATGGCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426299 34 - 91754291 ------------------CCCTgcaccgcaacgcgctcggccctgcaccgcc i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e rheMac8.chr2 202470438 6 + 204787373 I a score=7768.000000 s hg38.chr3_KI270779v1_alt 133064 8 + 205312 ACGCACCG s panTro5.chr3 200122326 8 + 202621043 ACGCACCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40483 8 - 55620 ACGCACCC i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 78274 8 + 192460366 ACGCCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553540 8 + 19675229 ACGCCCTG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426333 8 - 91754291 acgcactg i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e rheMac8.chr2 202470438 6 + 204787373 I e nomLeu3.chr11 120887986 111 + 123690457 T a score=14207.000000 s hg38.chr3_KI270779v1_alt 133072 13 + 205312 GGCCCTGCACCGC s panTro5.chr3 200122334 13 + 202621043 GGCCCTGCACCAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40491 13 - 55620 GGCCCGGCACCGC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202470444 13 + 204787373 GGCCTTGCACCGC i rheMac8.chr2 I 6 C 0 s macFas5.chr2 78282 13 + 192460366 GACCCTGCCCCGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553548 13 + 19675229 GACCCTGCCCCGC i macNem1.NW_012014355v1 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e chlSab2.chr15 426341 0 - 91754291 C e cerAty1.NW_012004056v1 492450 197 + 16847902 M e nomLeu3.chr11 120887986 111 + 123690457 T a score=38173.000000 s hg38.chr3_KI270779v1_alt 133085 24 + 205312 CACGCACCCGGCCCTGCACCGCCA s panTro5.chr3 200122347 24 + 202621043 AACGCACCCGGCCCTGCACCGCCA i panTro5.chr3 C 0 T 88 s gorGor5.CYUI01001831v1 40504 24 - 55620 AAAGCGCTCGGCCCTGCACCACCA i gorGor5.CYUI01001831v1 C 0 I 42 s nomLeu3.chr11 120887875 24 + 123690457 CGCGCTCTTGGCCCTGCACCGCCA i nomLeu3.chr11 T 111 C 0 s rheMac8.chr2 202470457 24 + 204787373 CACGCACTGGACCCTGCACCGCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78295 24 + 192460366 AACGCGCTGGGCCCTGGATCGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553561 24 + 19675229 AACGCGCTGGGCCCTGGATCGCCA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426341 15 - 91754291 ---------gaccctgcaccgcca i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=44859.000000 s hg38.chr3_KI270779v1_alt 133109 22 + 205312 CGCACCCGGCCCTGCACCGCCA s panTro5.chr3 200122283 22 + 202621043 CGCACCGGGCCCTGCACCACAA i panTro5.chr3 T 88 C 0 s gorGor5.CYUI01001831v1 40570 22 - 55620 CGCACTGGACCCTGCACCACAA i gorGor5.CYUI01001831v1 I 42 C 0 s nomLeu3.chr11 120887899 22 + 123690457 CGCACCGGGCCCTGCACCGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470481 22 + 204787373 CGCGCTCGGCCCTGGATCGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78319 22 + 192460366 CGCACTGGACCCTGCACCGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553585 22 + 19675229 CGCACTGGACCCTGCACCGCCA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426356 22 - 91754291 cgccctggaccctgcaccgcca i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 422788 247 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=11093.000000 s hg38.chr3_KI270779v1_alt 133131 7 + 205312 CGCACCG s panTro5.chr3 200122305 7 + 202621043 CGCACCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40592 7 - 55620 CGCACCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887921 7 + 123690457 CGCAGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470503 7 + 204787373 CGCCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78341 7 + 192460366 CACACTG i macFas5.chr2 C 0 T 44 s macNem1.NW_012014355v1 553607 7 + 19675229 CACACTG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426378 7 - 91754291 cgcactg i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423035 7 - 608964 CACTCTG i otoGar3.GL873829 I 247 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=67901.000000 s hg38.chr3_KI270779v1_alt 133138 55 + 205312 GGCCCTGCACCGCCACGCACCGGGCCCTGCACCACAACGCACCCGGCCCTGCACC s panTro5.chr3 200122312 55 + 202621043 GGCCCTGCACCGCCACGCACCGGGCCCTGCACCACAACGCACCCGGCCCTGCACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40599 55 - 55620 GGCCCTGCACCGCCACGCACCGGGCCCTGCACCACAACGCACTCGGCCCGGCACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887928 55 + 123690457 GGCCCTGCACTGCCACGCACCGGGCCCTGCACCACAACGCACCCGGCCCGGCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470510 55 + 204787373 GACCCTGCCCCGCAACGCGCTGGGCCCTGCATGGCCACGCCCTGGACCCTGCCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78304 55 + 192460366 GGCCCTGGATCGCCACGCACTGGACCCTGCACCGCCACACACTGGACCCTGAACC i macFas5.chr2 T 44 C 0 s chlSab2.chr15 426385 33 - 91754291 ----------------------gaccctgcaccgccacgccctggaccctgcacc i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423042 37 - 608964 TTCCCTG--TCGCCAC-------------CTCCACAACTCAC---ACGCTGCTCC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e canFam3.chr33 29074907 85 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e macNem1.NW_012014355v1 553614 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=1160.000000 s hg38.chr3_KI270779v1_alt 133193 2 + 205312 GC s panTro5.chr3 200122367 2 + 202621043 GC i panTro5.chr3 C 0 M 4298 s gorGor5.CYUI01001831v1 40654 2 - 55620 GC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887983 2 + 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470565 2 + 204787373 GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78359 2 + 192460366 GC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426418 2 - 91754291 gc i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423079 1 - 608964 C- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29074992 2 + 31377067 GC i canFam3.chr33 I 85 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e macNem1.NW_012014355v1 553614 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=10236.000000 s hg38.chr3_KI270779v1_alt 133195 28 + 205312 AAA----------------------GCACTCGGCGCGGCACCGCCACGCG s gorGor5.CYUI01001831v1 40656 50 - 55620 AAAGCGCTCGGCCCTGCACCACAACGCACTCGGCCCGGCACCGCCACGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887985 28 + 123690457 ----------------------AACGCGCTCGGCCCTGCACCGCAACGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470567 28 + 204787373 ----------------------AACGCGCTGGGCCCTGGATCGCCACGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78361 28 + 192460366 ----------------------AATGCGCTCGGCCCTGCACCGCAACACG i macFas5.chr2 C 0 T 41 s chlSab2.chr15 426420 28 - 91754291 ----------------------aacgccctggacgctgcaccgccacacg i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423080 12 - 608964 ----------------------AGGGCACTGGGC---------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29074994 19 + 31377067 ----------------------GAGGCTCCCGGGGTGGGTG--------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e macNem1.NW_012014355v1 553614 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e panTro5.chr3 200122369 4298 + 202621043 M a score=1185.000000 s hg38.chr3_KI270779v1_alt 133223 2 + 205312 CC s gorGor5.CYUI01001831v1 40706 2 - 55620 CC i gorGor5.CYUI01001831v1 C 0 I 22 s nomLeu3.chr11 120888013 2 + 123690457 GC i nomLeu3.chr11 C 0 I 3 s rheMac8.chr2 202470595 1 + 204787373 -C i rheMac8.chr2 C 0 I 1 s chlSab2.chr15 426448 1 - 91754291 -c i chlSab2.chr15 C 0 I 1 s canFam3.chr33 29075013 2 + 31377067 CC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 423092 0 - 608964 C e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e macNem1.NW_012014355v1 553614 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e macFas5.chr2 78389 41 + 192460366 T e panTro5.chr3 200122369 4298 + 202621043 M a score=-362.000000 s hg38.chr3_KI270779v1_alt 133225 21 + 205312 CGGCCCTGCACCACAACGCAC s panTro5.chr3 200126669 21 + 202621043 CGGCCCTGCACCGCCACGCAC i panTro5.chr3 M 4298 C 0 s gorGor5.CYUI01001831v1 40730 21 - 55620 CGGCCCGCCACCGCAACGCAC i gorGor5.CYUI01001831v1 I 22 C 0 s nomLeu3.chr11 120888018 18 + 123690457 CCGCC---CACCTCACTGCTC i nomLeu3.chr11 I 3 C 0 s rheMac8.chr2 202470597 21 + 204787373 GGACCCTGCACCGCCACACAC i rheMac8.chr2 I 1 C 0 s chlSab2.chr15 426450 15 - 91754291 ggaccctgcaccgca------ i chlSab2.chr15 I 1 C 0 s otoGar3.GL873829 423092 4 - 608964 --ACCC--------------- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29075015 1 + 31377067 ----C---------------- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e dasNov3.JH569502 3901059 312 + 6579706 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e macNem1.NW_012014355v1 553614 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M e macFas5.chr2 78389 41 + 192460366 T a score=545.000000 s hg38.chr3_KI270779v1_alt 133246 2 + 205312 CC s panTro5.chr3 200126690 2 + 202621043 CG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40751 2 - 55620 CC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888036 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470618 2 + 204787373 TG i rheMac8.chr2 C 0 C 0 s dasNov3.JH569502 3901371 2 + 6579706 CC i dasNov3.JH569502 I 312 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 423096 1 - 608964 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29075016 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e macNem1.NW_012014355v1 553614 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e chlSab2.chr15 426465 0 - 91754291 C e cerAty1.NW_012004056v1 492450 197 + 16847902 M e macFas5.chr2 78389 41 + 192460366 T a score=-2159.000000 s hg38.chr3_KI270779v1_alt 133248 2 + 205312 -GG s panTro5.chr3 200126692 2 + 202621043 -GG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40753 2 - 55620 -GG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888038 2 + 123690457 -GG i nomLeu3.chr11 C 0 T 54 s rheMac8.chr2 202470620 2 + 204787373 -GA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78348 2 + 192460366 -GA i macFas5.chr2 T 41 C 0 s macNem1.NW_012014355v1 553614 2 + 19675229 -GA i macNem1.NW_012014355v1 C 0 C 0 s otoGar3.GL873829 423097 1 - 608964 -G- i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3901373 2 + 6579706 TG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29075016 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e chlSab2.chr15 426465 0 - 91754291 C e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=15169.000000 s hg38.chr3_KI270779v1_alt 133250 12 + 205312 CCCTGC-ACCGCC s panTro5.chr3 200126694 12 + 202621043 CCCTGC-AACACA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40755 12 - 55620 CCCGGC-ACCGCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202470622 12 + 204787373 CCCTGA-ACCGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78350 12 + 192460366 CCCTGA-ACCGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553616 12 + 19675229 CCCTGC-ACCGCA i macNem1.NW_012014355v1 C 0 C 0 s otoGar3.GL873829 423098 10 - 608964 --CTGA-ACTCCC i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29075016 12 + 31377067 CCCCAA-GCCCCC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3901375 13 + 6579706 CCCTGCTGCTGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e chlSab2.chr15 426465 0 - 91754291 C e cerAty1.NW_012004056v1 492450 197 + 16847902 M e nomLeu3.chr11 120888040 54 + 123690457 T a score=2997.000000 s hg38.chr3_KI270779v1_alt 133262 1 + 205312 A s panTro5.chr3 200126706 1 + 202621043 A i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 40767 1 - 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887986 1 + 123690457 A i nomLeu3.chr11 T 54 C 0 s rheMac8.chr2 202470634 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78362 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553628 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426465 1 - 91754291 a i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423110 1 - 608964 A i otoGar3.GL873829 I 2 C 0 s dasNov3.JH569502 3901388 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29075028 1 + 31377067 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e panPan2.chrUn_NW_014024201v1 97270 1262 + 190779 M e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=32748.000000 s hg38.chr3_KI270779v1_alt 133263 13 + 205312 CGCGCCCGGCCCT s panTro5.chr3 200126707 13 + 202621043 CGCACTCGGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98533 13 + 190779 CGCACCCGGCCCT i panPan2.chrUn_NW_014024201v1 M 1262 C 0 s gorGor5.CYUI01001831v1 40768 13 - 55620 AGCGCTCGGCCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120887987 13 + 123690457 CGCGCTCGGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470635 13 + 204787373 TGCGCTCGGCCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78363 13 + 192460366 TGCGCTCGGCCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553629 13 + 19675229 TGCGCTCGGCCCT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426466 13 - 91754291 cgcgctcggccct i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423111 4 - 608964 -----TGGG---- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29075029 12 + 31377067 CAAGCCCGACCC- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3901389 13 + 6579706 CCAACACTGCTTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492450 197 + 16847902 M a score=34298.000000 s hg38.chr3_KI270779v1_alt 133276 9 + 205312 GCACCGCAA s panTro5.chr3 200126720 9 + 202621043 GCACCGCAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98546 9 + 190779 GCACCGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40781 9 - 55620 GCACCGCAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888000 9 + 123690457 GCACCGCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470648 9 + 204787373 GCACCGCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78376 9 + 192460366 GCACCGCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553642 9 + 19675229 GCACCGCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492655 9 + 16847902 GCACAGCAA i cerAty1.NW_012004056v1 M 197 C 0 s chlSab2.chr15 426479 9 - 91754291 gcacagcaA i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423115 2 - 608964 -------GA i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3901402 8 + 6579706 -CAGGACAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29075041 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468500 34 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=121996.000000 s hg38.chr3_KI270779v1_alt 133285 28 + 205312 CGCGGCTTCCCGCCCACCTCGCTGCTCC s panTro5.chr3 200126729 28 + 202621043 CGCGGCTTCCCGCCCACCTCGCTGCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98555 28 + 190779 CGCGGCTTCCCGCCCACCTCGCTGCTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40790 28 - 55620 CGCGGCTTCCCGCCCACCTCGCTGCTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888009 28 + 123690457 CGCGGCTTCCCGCCCACCTCACTGCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470657 28 + 204787373 CACGGCTTCCCGCCCAGCTCGCTGCTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78385 28 + 192460366 CACGGCTTCCCGCCCAGCTCGCTGCTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553651 28 + 19675229 CACGGCTTCCCGCCCAGCTCGCTGGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492664 28 + 16847902 CACGGCTTCCCGCCCAGCTCGCTGCTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426488 28 - 91754291 CACGGCTTCCCGCCCAGCTCGCTGCTGC i chlSab2.chr15 C 0 C 0 s saiBol1.JH378146 468534 28 + 17725628 CACGGCTCCCCGCACGGCTCGCTGCTCC i saiBol1.JH378146 I 34 I 10 s otoGar3.GL873829 423117 5 - 608964 CACAG----------------------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3901410 26 + 6579706 CTGGGCACCCCTCTGAACT--CTGACCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29075041 0 + 31377067 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=-20807.000000 s hg38.chr3_KI270779v1_alt 133313 3 + 205312 C----GG s panTro5.chr3 200126757 3 + 202621043 C----GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98583 3 + 190779 C----GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40818 3 - 55620 C----GG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888037 3 + 123690457 C----GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470685 3 + 204787373 CGG---- i rheMac8.chr2 C 0 I 6 s macFas5.chr2 78413 1 + 192460366 C------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553679 1 + 19675229 C------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492692 3 + 16847902 C--GG-- i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 426516 1 - 91754291 C------ i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29075041 2 + 31377067 -----GA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901436 3 + 6579706 ----AGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 423122 0 - 608964 C e mm10.chr16 65438622 351 - 98207768 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468562 10 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=18790.000000 s hg38.chr3_KI270779v1_alt 133316 15 + 205312 TGCGGGGAGGGGGCG s panTro5.chr3 200126760 15 + 202621043 TGCGGGGAGGGGGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98586 15 + 190779 TGCGGGGAGGGGGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40821 15 - 55620 TGCGGGGAGGGGGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888040 15 + 123690457 TGCGGGGAGGGGGCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78414 7 + 192460366 --------GGAGGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553680 7 + 19675229 --------GGAGGTA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 426517 7 - 91754291 --------GGAGATA i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423122 9 - 608964 ------AAGAGGGCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29075043 15 + 31377067 GGAGGCAGGGGAGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901439 15 + 6579706 GAAGCAGGAGAGGTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e mm10.chr16 65438622 351 - 98207768 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468562 10 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e cerAty1.NW_012004056v1 492695 5 + 16847902 I e rheMac8.chr2 202470688 6 + 204787373 I a score=5952.000000 s hg38.chr3_KI270779v1_alt 133331 3 + 205312 GCC s panTro5.chr3 200126775 3 + 202621043 GCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98601 3 + 190779 GCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40836 3 - 55620 GCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888055 3 + 123690457 GCC i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 423131 3 - 608964 GAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438973 3 - 98207768 GCT i mm10.chr16 I 351 C 0 s canFam3.chr33 29075058 3 + 31377067 GAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901454 3 + 6579706 GCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e macNem1.NW_012014355v1 553687 0 + 19675229 C e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468562 10 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T e chlSab2.chr15 426524 0 - 91754291 C e cerAty1.NW_012004056v1 492695 5 + 16847902 I e macFas5.chr2 78421 0 + 192460366 C e rheMac8.chr2 202470688 6 + 204787373 I a score=6987.000000 s hg38.chr3_KI270779v1_alt 133334 2 + 205312 GG--- s panTro5.chr3 200126778 2 + 202621043 GG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98604 2 + 190779 GG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40839 2 - 55620 GG--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888058 2 + 123690457 GG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470694 2 + 204787373 GG--- i rheMac8.chr2 I 6 C 0 s macFas5.chr2 78421 2 + 192460366 GG--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553687 2 + 19675229 GG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492700 2 + 16847902 GG--- i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 426524 2 - 91754291 GG--- i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 423134 1 - 608964 -G--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438976 2 - 98207768 GA--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29075061 2 + 31377067 GG--- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3901457 5 + 6579706 GACAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e saiBol1.JH378146 468562 10 + 17725628 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=2647.000000 s hg38.chr3_KI270779v1_alt 133336 3 + 205312 -CGC s panTro5.chr3 200126780 3 + 202621043 -CGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98606 3 + 190779 -CGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40841 3 - 55620 -TGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888060 3 + 123690457 -CGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470696 3 + 204787373 -CGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78423 3 + 192460366 -GGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553689 3 + 19675229 -CGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492702 3 + 16847902 -CGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426526 3 - 91754291 -CGC i chlSab2.chr15 C 0 C 0 s saiBol1.JH378146 468572 3 + 17725628 -CAC i saiBol1.JH378146 I 10 C 0 s mm10.chr16 65438978 3 - 98207768 -CAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29075064 2 + 31377067 -TG- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3901462 3 + 6579706 CTG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7424513 425 + 22200726 I e micMur3.chr1 25909471 517 - 114275543 I e otoGar3.GL873829 423135 0 - 608964 C e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=20578.000000 s hg38.chr3_KI270779v1_alt 133339 2 + 205312 TC s panTro5.chr3 200126783 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98609 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40844 2 - 55620 TC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888063 2 + 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470699 2 + 204787373 TC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78426 2 + 192460366 TC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553692 2 + 19675229 TC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492705 2 + 16847902 TC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426529 2 - 91754291 TC i chlSab2.chr15 C 0 C 0 s saiBol1.JH378146 468575 2 + 17725628 TC i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25909988 2 - 114275543 TC i micMur3.chr1 I 517 C 0 s proCoq1.NW_012133858v1 7424938 2 + 22200726 TC i proCoq1.NW_012133858v1 I 425 C 0 s otoGar3.GL873829 423135 2 - 608964 TC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438981 2 - 98207768 TA i mm10.chr16 C 0 C 0 s canFam3.chr33 29075066 2 + 31377067 TC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901465 2 + 6579706 TT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 432520 617 - 6778120 I e calJac3.chr17 943866 678 - 74750902 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=58391.000000 s hg38.chr3_KI270779v1_alt 133341 6 + 205312 CCCAAC s panTro5.chr3 200126785 6 + 202621043 CCCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98611 6 + 190779 CCCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40846 6 - 55620 CCCAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888065 6 + 123690457 CTCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470701 6 + 204787373 CCCAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78428 6 + 192460366 CCCAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553694 6 + 19675229 CCCAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492707 6 + 16847902 CCCAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426531 6 - 91754291 CCCAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 944544 6 - 74750902 CCCACC i calJac3.chr17 I 678 C 0 s saiBol1.JH378146 468577 5 + 17725628 -CCGCC i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25909990 6 - 114275543 CCCAGC i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7424940 6 + 22200726 CCCAGC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 423137 6 - 608964 CTCGGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438983 6 - 98207768 CGGAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29075068 6 + 31377067 CCCAGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901467 6 + 6579706 CTCAGA i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=24211.000000 s hg38.chr3_KI270779v1_alt 133347 2 + 205312 CT s panTro5.chr3 200126791 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98617 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40852 2 - 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888071 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470707 2 + 204787373 CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78434 2 + 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553700 2 + 19675229 CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492713 2 + 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426537 2 - 91754291 CC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 944550 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468582 2 + 17725628 CT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 1263 2 + 21398 CT i aotNan1.NW_018492867v1 N 0 C 0 s micMur3.chr1 25909996 2 - 114275543 CT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7424946 2 + 22200726 CT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 423143 2 - 608964 CT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438989 2 - 98207768 CT i mm10.chr16 C 0 C 0 s canFam3.chr33 29075074 2 + 31377067 CT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901473 2 + 6579706 CT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M e manLeu1.NW_012102020v1 594464 4962 - 1977891 T a score=612780.000000 s hg38.chr3_KI270779v1_alt 133349 51 + 205312 ACCTCCGCCGTCTTCATGGTCAGGCTGAAATGTCACAGTCTGGTTATCCAG s panTro5.chr3 200126793 51 + 202621043 ACCTCCGCCGTCTTCATGGTCAGGCTGAAATGTCACAGTCTGGTTATCCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98619 51 + 190779 ACCTCCGCCGTCTTCATGGTCAGGCTGAAATGTCACAGTCTGGTTATCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40854 51 - 55620 ACCTCCGCCGTCTTCATGGTCAGGCTGAAATGTCACAGTCTGGTTATCCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888073 51 + 123690457 ACCTCTGCCGTCTTCATGGCCAGGCTTAAATGTCACAGTCTGGTTATCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470709 51 + 204787373 ACCTCCGCCGTCTCCATGTCCAGGCTCAAATGTCACAGTCTGGTTATCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78436 51 + 192460366 ACCTCCGCCGTCTCCATGTCCAGGTTCAAATGTCACAGTCTGGTTATCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553702 51 + 19675229 ACCTCCGCCGTCTCCATGTCCAGGCTCAAATGTCACAGTCTGGTTATCCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492715 51 + 16847902 ACCTCCGCCGTCTCCATGGCCAGGCTCAAATGTCACAGTCTGGTTATCCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426539 51 - 91754291 ACCTCCGCCGTCTCCATGGCCAGGCTCAAATGTCACAGTCTGGTTATCCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589502 51 - 1977891 ACCTCCGCCGTCTCCATGGCCAGGCTCAAATGTCACAGTCTGGTTATCCAG i manLeu1.NW_012102020v1 T 4962 C 0 s calJac3.chr17 944552 51 - 74750902 ACCTCCATCGTCTTCGTGGTCAGGCTCAAACGTCACATTCTGGTTGTCAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468584 51 + 17725628 ACCTCCATCGTCTTCGTGGTCAGGTTCAAATGTCACATTCCGGTTATCAAG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 1265 51 + 21398 ACCTCCATCATCTTCGTGGTCAGGCTCAAATGTCACATTCTGGTTATCAAG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25909998 51 - 114275543 ACCTTCTCCATCTTCATGCTTAGTCTCAAATGTCACAGTCTGGTTATTGAG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7424948 51 + 22200726 ACCTTCTCCATCTTCATGCTTAGTCTCAAATGTCACAGTCTGGTTATTGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 423145 51 - 608964 ACCTTCTCCGTTTTCATACTTTGTCTCAAATGTCACTGTCTGGTTATTGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65438991 45 - 98207768 ACCTTCAGTGTCT------CTGGTGTTAAAGGCCACAGTCTGGTTATTGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29075076 42 + 31377067 ---------ACCTTCGTGCTGAGTCTCAAACGTCACAGTCTGGTTGTTGAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901475 51 + 6579706 ACCTTCTGCATCTTCACGGTTGGTTTCAAACGTCACAGTGTGGTTGTTGAT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 432520 617 - 6778120 I e colAng1.NW_012118932v1 461908 965 + 7796314 M a score=190427.000000 s hg38.chr3_KI270779v1_alt 133400 15 + 205312 CAGGACACGGATTGC s panTro5.chr3 200126844 15 + 202621043 CAGGACACGGATTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98670 15 + 190779 CAGGACACGGATTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40905 15 - 55620 CAGGACACGGATTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888124 15 + 123690457 CAGGACATGGATTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470760 15 + 204787373 CAGGACATGGATTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78487 15 + 192460366 CAGGACATGGATTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553753 15 + 19675229 CAGGACATGGATTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492766 15 + 16847902 CAGGACATGGATTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426590 15 - 91754291 CAGGACATGGATTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589553 15 - 1977891 CAGGACATGGATTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 462876 15 + 7796314 CAGGACATGGATTCC i colAng1.NW_012118932v1 M 965 C 0 s calJac3.chr17 944603 15 - 74750902 CAGAACACGGATTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468635 15 + 17725628 CAGAACACGGATTCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 1316 15 + 21398 CAGAACACGGATTCT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25910049 15 - 114275543 CAGAACACGGATAGT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7424999 15 + 22200726 CAGAACACGGATAGT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 423196 15 - 608964 CAGAACACGGATAGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65439036 15 - 98207768 TACGACTCGGATTTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29075118 15 + 31377067 CTGCACGCGGACCGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901526 15 + 6579706 CAGAATGTGGATGGT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 432520 617 - 6778120 I a score=1149322.000000 s hg38.chr3_KI270779v1_alt 133415 72 + 205312 GTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGGCCTGAGCCCGACCCGCAGGTGGAG s panTro5.chr3 200126859 72 + 202621043 GTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGGCCTGAGCCCGACCCGCAGGTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98685 72 + 190779 GTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGGCCTGAGCCCGACCCGCAGGTGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40920 72 - 55620 GTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGGCCTGAGCCCGACCCGCAGGTGGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888139 72 + 123690457 GTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGACCTGAGCCCCACTCGCAGGTGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470775 72 + 204787373 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78502 72 + 192460366 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553768 72 + 19675229 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492781 72 + 16847902 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426605 72 - 91754291 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589568 72 - 1977891 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 462891 72 + 7796314 ATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 944618 72 - 74750902 GTCGTGAGGCTCAAGGAGCCACTGAACCTGCAAGGAGATGGGAGGGGAGCTGAGGCCGACCCGCAGGTGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468650 71 + 17725628 GTCGTGAGGCTCAAGGAGCCACTGAACCTGC-AGGGGACGGGAGGGGATCTGAGCCCGACCCGCAGGTGCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433137 72 - 6778120 GTCATGAGGCTCAAGGAGCCACTGAACCTGCAAGGAAACGGGAGGGGATCTGAGCCTGACCCACAGGTGCAG i cebCap1.NW_016107444v1 I 617 C 0 s aotNan1.NW_018492867v1 1331 71 + 21398 GTCGTGAGGCTCAAGGAGCCACTGAACCTGC-AAGAGACGGGAGGGATCTGAAGCCCGCCCCGCAGGTGCAG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25910064 72 - 114275543 GTCATTGGGCTCAAGGAACCATTGAACCTGGAAGGGAATTGGAGGAGGCTTAAGTCTGACCTGCAGGTGGAG i micMur3.chr1 C 0 I 463 s proCoq1.NW_012133858v1 7425014 72 + 22200726 GTCATTGGGCTCAAGGAACCATTGAACCTGGAAGGGAATTGGAGGAGGCGTAAGTCCGACCTGGAGGTGGAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 423211 72 - 608964 GTCATGGGCCTCGAGGAGCCATTGAACCTGGAAAGGAATTGGAGGAGGCCTAAGTCGGCCCTGCAGGTGGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65439051 72 - 98207768 GTCACTGGGCTCAAGAAACCACTGAACCTGGGAAAGAATTGGAGGAGGCCTAAGCCCAACCAGCAGGCACAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29075133 72 + 31377067 GTCATTGGGCTCGAGGAGCCATCGGACCTGGGAGAGAATTGGAGGAGGCCTAAGCCGGACCCTCGGGTGGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901541 63 + 6579706 GTCATTGGGTTCAAGGGACCACTGAACCTGGAAGGAAAATGGAGGAGGCCTAAGT---------AAATGGGA i dasNov3.JH569502 C 0 C 0 a score=21000.000000 s hg38.chr3_KI270779v1_alt 133487 1 + 205312 C s panTro5.chr3 200126931 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98757 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40992 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888211 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470847 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78574 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553840 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492853 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426677 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589640 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 462963 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 944690 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468721 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433209 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1402 1 + 21398 C i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7425086 1 + 22200726 C i proCoq1.NW_012133858v1 C 0 I 454 s otoGar3.GL873829 423283 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65439123 1 - 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr33 29075205 1 + 31377067 C i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901604 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25910136 463 - 114275543 I a score=174352.000000 s hg38.chr3_KI270779v1_alt 133488 22 + 205312 -CGACGCCCAGGAAAGCAGCT-GG- s panTro5.chr3 200126932 22 + 202621043 -CGACGCCCAGGAAAGCGGCT-GG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98758 22 + 190779 -CGACGCCCAGGAAAGCGGCT-GG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 40993 22 - 55620 -CGACGCCCAGGAAAGCGGCT-GG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888212 22 + 123690457 -CGACGCCCAGGAAAGCGGCT-GG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470848 22 + 204787373 -CGACGCCCAGGAGAGCGGCT-GG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78575 22 + 192460366 -CGACGCCCAGGAGAGCGGCT-GG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553841 22 + 19675229 -CGACGCCCAGGAGAGCGGCT-GG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492854 22 + 16847902 -CGACGCCCAGGAGAGCGGCT-GG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426678 22 - 91754291 -CGACGCCCAGGAGAGCGGCT-GG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589641 22 - 1977891 -CGACGCCCAGGAGAGCGGCT-GG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 462964 22 + 7796314 -CGACGCCCAGGCGAGCGGCT-GG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 944691 22 - 74750902 -AGATGCCCAGGAAAGCATAG-GG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468722 19 + 17725628 -AGATGCCCAGGGAAGCAGA----- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433210 22 - 6778120 -AGATGCCCAGGGAAGCAGAG-GG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1403 21 + 21398 -AGATGCCCAGGAAGGCAGA--GG- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 423284 23 - 608964 -AGAAACCTAGATAGGAGGCTCCA- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65439124 22 - 98207768 -AGAGGCCTGGAAATGAGGCC-AG- i mm10.chr16 C 0 I 1009 s canFam3.chr33 29075206 22 + 31377067 -CAGGGCCTGAGCATGGAGGC-CA- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901605 24 + 6579706 CAGAGGCCCAGAAAGGAGGCA-CCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425087 454 + 22200726 I e micMur3.chr1 25910136 463 - 114275543 I a score=2753074.000000 s hg38.chr3_KI270779v1_alt 133510 324 + 205312 GAGAGC---CCCTGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAAG------GCGCTGGAGGCCGCGGC-CTGA-GGTGATGCCAG-CCGCcgtctaccgtgt----gctcggca-ggg------------ccag--------gcatggttttcggattatgccctttagctcttacaacagccc-g-tgaggca--ggtaatgtcat---ccccattcttactaggagaaa--------accaaatt------a----------agtagtttcttcgaagccaagcagctgggaaaccgtggggccagagccctaa-tccaCCATCCCCAGGATTTACTCCG-----GGACAGCTGCGTGGATGG-GCTGTGTcctccctc--cctcctgccc------ggcttc s panTro5.chr3 200126954 324 + 202621043 GAGAGC---CCCTGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAAG------GCGCTGGAGGCCGCGGC-CCGA-GGTGATGCCAG-CCGCcgtctaccgcgt----gctcggca-ggg------------ccag--------gcatggttttcggattatgccctttagctcttacaacagccc-g-tgaggca--ggtaatgtcat---ccccattcttactaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaagcagctgggaaaccgtggggccagagccctaa-tccaCCATCCCCAGGATTTACTCCC-----GGACAGCTGCGTGGATGG-GCTGTGTcctccctc--cctcctgccc------ggcttc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 98780 324 + 190779 GAGAGC---CCCTGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAAG------GCGCTGGAGGCCGCGGC-CCGA-GGTGATGCCAG-CCGCcgtctaccgcgt----gctcggca-ggg------------ccag--------gcatggttttcggattatgccctttagctcttacaacatccc-g-tgaggca--ggtaatgtcat---ccccattcttactaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaagcagctgggaaaccgtggggccagagccctaa-tccaCCATCCCCAGGATTTACTCCG-----GGACAGCTGCCTGGATGG-GCTGTGTcctccctc--cctcctgccc------ggcttc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41015 322 - 55620 GAGAGC---CCCTGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAAG------GCGCTGGAGACCGCGGC-CCGA-GGTGATGCCAG-CCGCcgtctaccgtgt----gctcggca-ggg------------ccag--------gcatggttttcggattatgccctttagctcttacaacagccc---tgaggca--ggtaatgtcat---cccca-tcctactaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaagcagctgggaaaccgtggggccagagccctaa-tccaCCATCCCCAGGATTTACTCCG-----GGACAGCTGCGTGGATGG-GCTGTGTCCTCCCTC--TCTCCTGCCC------AGCTTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888234 324 + 123690457 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAGG------GCGCTGGAGGCCGCCGC-CCGA-GGTGATGCCAG-CCGCcgtctaccctgt----gctcagca-ggg------------tcag--------gcatagttttcggattatcccctttagctcttacaacagccc-a-tgaggca--ggtaatgttat---ccccattcttactaggagaaa--------accaagtt------c----------agtagtttcttcgaagccaaacagctgggaaaccgtggggccagagccctaa-tccaCCATCCCCAGGATTGACTCCG-----GGACAGCTGCGTGGATAG-GATGTGTcctccctc--cctcctgccc------agcttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202470870 321 + 204787373 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAG------GCGCTGGAGGCCGCGGC-CCGA--GTGACGCCAG-CC-Ccgtctaccgtgt----gctccgca-ggg------------ccag--------gcatggttttcggatgagcccctttagctctcacaacagccc-g-tgaggca--agtcatgttat---ccccgttcctaccaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAA-TCCCCCATCCGCACGATTTACTCCG-----GGACAGCTGCGCGGATGG-GGTGTGG-CTCCCTC--CCTCCTGCCC------GGCTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78597 321 + 192460366 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAG------GCGCTGGCGGCCGCGGC-CCGA--GTGACGCCAG-CC-Ccgtctaccgtgt----gctccgca-ggg------------ccag--------gcatggttttcggatgagcccctttagctctcacaacagccc-g-tgaggca--agtcatgttat---ccccgttcttaccaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAA-TCCCCCATCCGCACGATTTACTCCG-----GGACAGCTGCGCGGATGG-GGTGTGG-CTCCCTC--CCTCCTGCCC------GGCTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 553863 321 + 19675229 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCCGGAGGAAG------GCGCTGGAGGCCGCGGC-CCGA--GTGACGCCAG-CC-Ccgtctaccgtgt----gctccgct-ggg------------ccag--------gcatggttttcggatgagcccctttagctctcacaacagccc-g-tgaggca--agtcatgttat---ccccgttcttaccaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAA-TCCCCCATCCGCACCATTTACTCCG-----GGACAGCTGCGCGGATGG-GGTGTGG-CTCCCTC--CCTCCTGCCC------GGCTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 492876 299 + 16847902 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAG------------------------------GTGACGCCAG-CC-Ccgtctaccgtgt----gctccgcg-ggg------------ccag--------gcatggttttcggatgatcccctttagctctcacaacagccc-g-tgaggca--agtcatgttat---ccccgttcttaccaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAA-TCCCCCATCCCCAGGATTTACTCCG-----GGACAGCTGCGCGGATGG-GGCGTGG-CTCCCCC--CCTCCTGCCC------GGCTT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 426700 321 - 91754291 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAG------GCGCTGGAGGCCGCGGC-CCGA--GTGACGCCAGCCC-Ccgtctacggtgt----gctccgca-ggg------------ccag--------gcatggttttcggatgatcccctttagctctcacaacagccc-g-tgaggca--agtcatgttat---ccccgttcttaccaggagaaa--------accaagtt------a----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAA-TCCCCCATCCCCAGGATTTACTCCG-----GGACAGGTGCGCGGATGG-GGTGTGG-CTCCCTC--CCTCCTGCCC------GGCTT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589663 299 - 1977891 GAGAGC---CCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAG------------------------------GTGACGCCAG-CC-Ccgtctaccgtgt----gctccgca-ggg------------ccag--------gcatggttttcggatgatcccctttagctctcacaacagccc-g-tgaggca--agtcatgttat---ccccattcttaccaggagaaa--------accaagtt------a----------actagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAA-TCCCCCATCCCCAGGATTTACTCCG-----GGACAGCTGCGCGGATGG-GGCGTGG-CTCCCCC--CCTCCTGCCC------GGCTT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 462986 323 + 7796314 GAGAGC---CCCCAGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAG------GCGCTGGAGGCCGCGGC-CCAA--GTGATGCCAG-CC-Ccgtctaccgtgt----gctccgca-ggg------------ccag--------gcatggttttcgggttatcccctttagctctcacaacagccc-c-tgaggcaacaagaatgttat---ccccattcttactaggagaaa--------accgagtt------a----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccaggGCCGTAA-TCCCCCCTCCCCACGATTTACTCCG-----GGACAGCTGCGCGGGTGG-GGTGTGG-CCTCCTC--TCTCCTGCCT------GGCTTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 944713 282 - 74750902 GAGAGT---GCCTGGGG-------------------CTGGGAGGAAG------GGGCTGGAGGCT--------------------------GCAGCCactgtgt----gctctgca----------------ccag--------gcctggttttcagatgatccccttcaactcccacagcagcct-g-tgaggca--ggtaacgttattatccccattccgactagaag-aa--------accaagtt------a----------agtagtttctttgaaaccaaacagctgggaaaccgtggtgccagaaACCTCATCCTGCCACCCCCAGGATTTACTCGG-----GGACAGCTGTGAGGGTGG-AATGTGACCTCCCTC--CCTCCTGCCC------GGCTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 468741 304 + 17725628 -------------GGGG-------------------CTGGGAGGAAG------GTGCTGGAGGCT-CGGC-CGGA-GGTGGTGCCCa-ccaacgcccaccgcgt----gctctgca-gggccaggctctgtgccag--------gcacagttttcagatgatctccttcaactcccacagcagcct-g-cgaggca--ggtaatgttattatccccattcctactagaag-aa--------acc-----------a----------agTAGTTTCTTTGAAACCAAACAGCTGGGAGACCGTGGCGCCAGAGCCCTCATCCCGCCATCCCCAGGATTTACTCCG-----GGACAGCTGCGAGGGTGG-AACGTGACCTCCCTC--CGTCCTGCCC------GGCTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433232 339 - 6778120 GCGAGC---GCCCAGGGCTGGGAGCTGCACCCTGGACTGGGAGGAAG------GTGCTGGAGGCTGCGGC-CCAA-GGTGGTGCCCG-CCGACGGCCACCGTGT----GCTCTGCA-GGgccaggctctgcgccag--------gcatggttttcagatgatccccttcaacccccacagcagcct-g-tggggca--ggtaatgttatcatccccattcttactagaag-aa--------accaagtt------a----------agtggtttctttgaaaccaaacagctgggaaaccgtggcgccagaaCCCTCATGCTGCCATCCCCAGAATTTACTCCT-----GGACAGCTGCGAGGGTGG-AACGTGACCTCCCTC--CCTCCTGCCC------GGCTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1424 334 + 21398 GAGAGC---GCC-AGGGCTGGGGGCTGCGCCCTGGACTGGAAGGAAG------GTGCTGGAGGCTGTGGC-CCGA-GGTGGTGCCCA-CCGACCGCCACCATGG----GCTCTGCA-GGGCCAAGCTCTGCGCCAG--------GCATGGTTTTCAGAAGACAGCCttcaactcccacagcagcct-g-tgaggca--ggtcatgttattagccccattcctactagaag-aa--------accaagtt------a----------agtagtttctttgaaaccaaacagcc-ggaaaccgcggcgccagaaccatca-cccgccat-cccaggatttactC-------GGACAGCTGCAAGGGTGGAAATGTGACCTCCCTC--CCTCCTGCCC------GGCTTC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 423307 336 - 608964 GAGAGC---AACTGAGGT------CTAGGGCCTGGGCCTGGAGGAAGAGGAAAGTGCTGGAGAGTGTGGA-GTGA-GGCTGTGTTAG-CCAGCGCCTGGGgcca----ggttcatg----------------ctgg--------gcacccctctcagatcatcttgtttg--tcacacaatggccc-tctggggca--ggtaatattactatcttcattc-taccataagaaaattgggacactgaggt------a----------agttgtttcctcgaagtcaaacagctggtgaatggtggagccaggaccctag-tcctcccacctccggatttactctg-----gggccactacaccaGCAG-GATATGTCCTCCCTC--CCTCCTGCCCCCCTTTGCCTTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29075228 318 + 31377067 CAGAGG---GCCTGGA--------------CCCGAGCCCCGAGGACG------AGGCGGGTGG-----GC-CTGACGGTGAGGTT---GCGCCGCCGACAGCGCTAGGGCGCGGCATGGG------------CCGGCTGagagcgcacgtttctcagatgatctcatttaaagctcacaacagccccg-tgaggca--a-tattgtcat---cctcagt-ttactccaagaaa--------agggaggc------agaggcgcccgggtggctccttgggtg---agcctctg-----cctcgggcccaggg-cgtga-tccctgggtcgtgggatcgagtcctgcatcgggctcctgcaggga--g-cctgcgt-ctccctctgcctgtgtctc------tgc--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3901629 349 + 6579706 GAGAGCAATGCTCAGGGCTAGAAGCTGAGCCCGGGG-GAAGAGGAAG------GTGACAGAGCATGTGATAATGA-GGTCatgaaag-ctaatatctatggagt----gtttaaca-tggaccacctctgcactag--------actcatttctttgatgatctcatttcaatctcccaatggtcctg-tgaagta--ggtaatattattagccctgct-taactgtaagaaa--------actgaggcactaaaa----------gttaatttctttaaagtcacacagctagtaaatgagggagccaggaccctaaacctgctacctctagagttcactctt-----gaaccactacaccaGCAA-TAGGTGTCGGCCctc--cttcctacct------cccttt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425087 454 + 22200726 I e micMur3.chr1 25910136 463 - 114275543 I e mm10.chr16 65439146 1009 - 98207768 I a score=567584.000000 s hg38.chr3_KI270779v1_alt 133834 83 + 205312 --------------------ccctccttcgctctcttcc----------------------------------------------------------tTCTCCTCGGCCTC--------AGTATGTGGCTGAAGG----------------TCCCTGT-----GGGT-----------GGAATGCAGGGAGGTTCCCGGCA s panTro5.chr3 200127278 83 + 202621043 --------------------ccctccttcgctctcttcc----------------------------------------------------------tTCTCCTCGGCCTC--------AGTATGTGGCCGAAGG----------------TCCCTGT-----GGGT-----------GGAATGCAGGGAGGTCCCCGGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99104 83 + 190779 --------------------ccctccttcgctctcttcc----------------------------------------------------------tTCTCCTCGGCCTC--------AGTATGTGGCTGAAGG----------------TCCCTGT-----GGGT-----------GGAATGCAGGGAGGTCCCCGGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41337 83 - 55620 --------------------CCCTCCTTCGCTCTCTTCC----------------------------------------------------------TTCTCCTCGGCCTC--------AGTATGTGGTTGAAGG----------------TCCCTGT-----GGGT-----------GGAATGCAGGGAGGTCCCCGGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888558 83 + 123690457 --------------------cccttcttcgctctcttcc----------------------------------------------------------ttctcccCGGCCTC--------AGTATGTGGCGGAAGG----------------TCCCTGT-----GGGT-----------GGAAGGCAGGGAGGTCCCTGGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471191 82 + 204787373 --------------------CTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTC--------AGTGTGTGGCTGAAGG----------------TCCCTGT-----GGAT-----------GCAATGCAGGGAGGTCCCC-GCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 78918 82 + 192460366 --------------------CTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTC--------AGTGTGTGGCTGAAGG----------------TCCCTGT-----GGAT-----------GCAATGCAGGGAGGTCCCC-GCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554184 82 + 19675229 --------------------CTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTC--------AGTGTGTGGCTGAAGG----------------TCCCTGT-----GGAT-----------GCAATGCAGGGAGGTCCCC-GCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 493175 82 + 16847902 --------------------GTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTC--------AGTGTGTGGCTGAAGG----------------TCCCTGT-----GGAT-----------GCAATGCAGGGAGGTCCCC-GCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427021 54 - 91754291 --------------------G---TCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTC--------AGTATGTGGCTGA---------------------------------------------------------AGGTCCCC-GCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 589962 82 - 1977891 --------------------GTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTTAGCCTC--------AGTGTGTGGCTGAAGG----------------TCCCTGT-----GCAT-----------GCAATGCAGGGAGGTCCCC-GCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 463309 82 + 7796314 --------------------CTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTC--------AGTATGTGGCTGAAGG----------------TCCCTGT-----GGAT-----------GGAATGCAGGGAGGACCCC-GCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 944995 87 - 74750902 --------------------CCCTTCTTTCTCCTCTTCC----------------------------------------------------------TTCTCCTGGGCCTC--------AATATCCGGCTGAAGGTG-----------AAATGCCTGT-----GGGT-----------GAAATGCAGG-AGGTCCCAGGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469045 80 + 17725628 --------------------CCCTTCTTTCTCCTCTTCC----------------------------------------------------------TTCTCCTGGGCCTC--------AGTATCCGGCTGAAGG----------------TGCCTGT------GGT-----------GAGATGCAGG-AGGTCCCAGGC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433571 78 - 6778120 --------------------CCCTTCTTTCTCCTCTTCC----------------------------------------------------------TT---CTGGGCCTC--------AATATCCAGCTGGAGG----------------TGCCCGT------GGT-----------GAGATGCAGG-AGGTCCCCGGCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1758 80 + 21398 --------------------GCCTTCTTTCTCCTCTTCC----------------------------------------------------------TTCTCCTGGGTCTC--------AATATCCGGGCGAG------------------TGCCTGT-----GGGT-----------GAAATGCAGG-AGGTCCCAGGCG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 423643 91 - 608964 --------------------CCTTTCTGTGTTCTTTTCC----------------------------------------------------------TCTTCCTGCACCTC--------AATTTCTAGCTGAAGT----------------TCCCTGT-----TGGGCTCTCTGCA--GGGACGCAGG-GGGTCCTGGGTG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65440155 86 - 98207768 --------------------CCTTTCTTTGTACTCTTCC----------------------------------------------------------TTTTC--------C--------AGTGTCCAGCTGACGG----------------TCTCTAA-----GGGGTTCTGGGGAAGGGATTGCAAGGATACCCTAGGTA i mm10.chr16 I 1009 C 0 s canFam3.chr33 29075546 155 + 31377067 ----------------------ctctctctgtgtctctcatgaataaataaataaaatcttaagaaaagaaaagtgaggcactggaaggtcagtagttcctccaggatcac--------a-----cggctgatggagccatgacccaaaTGGCACCGTTCATAGGGT-----------CGACTCTCGAGGTGTCCCCCGCC i canFam3.chr33 C 0 I 35 s dasNov3.JH569502 3901978 108 + 6579706 cccttcttcttctccctatcctcttccttgttctcttct----------------------------------------------------------tcctcttGGGCCTCCAACTGCAGGTCCCTAACTGAC------------------TCCCTAT-----GGG------------GAGGTGCAGGGATGTCTTGGGCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425087 454 + 22200726 I e micMur3.chr1 25910136 463 - 114275543 I a score=123271.000000 s hg38.chr3_KI270779v1_alt 133917 7 + 205312 -CCCCTCA s panTro5.chr3 200127361 7 + 202621043 -CCCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99187 7 + 190779 -CCCCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41420 7 - 55620 -CCCCTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888641 7 + 123690457 -CCCCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471273 7 + 204787373 -CCCCTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79000 7 + 192460366 -CCCCTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554266 7 + 19675229 -CCCCTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 493257 7 + 16847902 -CCCCTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427075 7 - 91754291 -CCCCTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 590044 7 - 1977891 -CCCCTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 463391 7 + 7796314 -CCCCTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945082 7 - 74750902 -CCCCTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469125 7 + 17725628 -TCCCTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433649 7 - 6778120 -CCCCTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1838 7 + 21398 -CCCCTCA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7425541 7 + 22200726 -CCCCTTG i proCoq1.NW_012133858v1 I 454 C 0 s otoGar3.GL873829 423735 7 - 608964 -CCCCCCA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65440241 7 - 98207768 -CCCCTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29075736 7 + 31377067 -CCCCTCC i canFam3.chr33 I 35 I 16 s dasNov3.JH569502 3902086 8 + 6579706 TCTTCTCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25910136 463 - 114275543 I a score=4041095.000000 s hg38.chr3_KI270779v1_alt 133924 220 + 205312 CTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGAAGCAGGAAGGAGGAGTTCCCGTCTTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAACTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGAA s panTro5.chr3 200127368 220 + 202621043 CTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGAAGCAGGAAGGAGGAGTTCCCGTCTTGGGCCCCGACCAGCAGGAAGTCTCCCAGCCCATTGAAGGTGTAACTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99194 220 + 190779 CTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGAAGCAGGAAGGAGGAGTTCCCGTCTTGGGCCCCGACCAGCAGGAAGTCTCCCAGCCCATTGAAGGTGTAACTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCAAACATCCAGGCTGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41427 220 - 55620 CTCACCGTGACGGGG---CCCAGACTGCTGGAGCGGTACTGAGCTGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGAAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCAACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAACTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888648 220 + 123690457 CTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACCGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCCACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTAATGTGGGGGTCCCCGAACATCCAGGCTGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471280 218 + 204787373 CTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCT--GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79007 218 + 192460366 CTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCTCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCT--GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554273 218 + 19675229 CTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCT--GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 493264 220 + 16847902 CTCACCGTCACAGGG---TCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427082 220 - 91754291 CTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGGGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGTCCTGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 590051 219 - 1977891 CTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCT-GGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 463398 220 + 7796314 CTCACCGTCACGGGG---CCCAGGCTGCTAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGAGCTGAGCCAGTCTGGGCAGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCTGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGGCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945089 220 - 74750902 CGAACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCAGCAAAGGCAACGAAGTTGGTGGCCTGGGCTGAGGCGGTCTGGGCGGTGCGGCCCTGCAGCTGGAAGGAGGAGTTCCCGTCCTGGGCCTGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTCACACCGTCTAAGGTGGTGATGTGGGGGTCCCCGATCATCCAGGCTGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469132 220 + 17725628 CGCACCGTGACGGGT---TCCAGGCTGCTGGAGCGGTACTGAGCGGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCCGTCTGGGCGGTGCGGCCCTGCAGCTGGAAGGAGGAGTTCCCGTCCTGGGCCTGGACCAGCAGGAAGTCCCCCAGTCCATTGAAGGTGTAATTCACACCGTCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433656 220 - 6778120 CGCACCGTGACGGGC---CCCAGGCTGCTGGAGCGGTACTGAGCGGCAAAGGCAATGAAGTTGGTGGCCTGGGCTGAGCCGGTCTGGGTGGTGCGGCCCTGCAGCTGGAAGGAGGAGTTCCCGTCCTGGGCCTGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTCACACCGTCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 1845 217 + 21398 CGAA-CGTGACGGGG---CCCAGGCTGCTGGAGTGGTACTGCGCGGCAAAGGCAATGAAGTTGGTGG-CTGGGCTGAGCCGGTCTGGGCGGCTCGGCCCTGCAGCTGGAAGGAGGAGTTCCC-TCCTGGGCCTGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTCACACCGTCCAAGGTGGTGATGTTGGGGTCCCCGAACATCCAGGCTGGAA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25910599 220 - 114275543 CTCACTGTGATGGGG---CCCAGGCTGCTGGAGTGGTACTGAGCTGCAAAGGCAATGAAGTTGGTGGCCTGGACAGAGCCCATCTGGGCAGTGCGGCCCTGCAGCAGGAAGGAGGAGTTTCCATCCCAGGCCCGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAAGTAGTGATGTGGGGGTCCCCAAACAGCCAGGCTGGAA i micMur3.chr1 I 463 C 0 s proCoq1.NW_012133858v1 7425548 220 + 22200726 CTCACCGCGATGGGG---CCCAGGCTGCTGGAGTGGTACTGAGCCGCAAAGGCAATGAAGTTGGTGGCCTGGACTGAGCCCGTCTGGGCAGTGCGGCCCTGCAGCAGGAAGGAGGAGTTTCTGTCCCAGGCCCTGACGAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGGCACCATCCAAGGTAGTGATGTGGGGGTCCCCAAACATCCAGGCTAGAA i proCoq1.NW_012133858v1 C 0 I 219 s otoGar3.GL873829 423742 220 - 608964 CTCACTGTGATGGAG---CCCAGGCTGCTGGAGTTGTATTGAGCTGCAAAGGCAATGAAGTTGGTGGCCTGGGCTGAGCCTGTCTGAGCAGTGCGGCCCTCCAGCAGGAAGGACGAGTTTCTGTCCCAGGCCCGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTATAATTGGTGCCATCCATGGTAGTGATGTGAGGGTCCCCAAACATCCAAGCTGAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440248 223 - 98207768 CTTACCGTGATGGGAGACTTCAGGCTGCTGGTGTTGTATTGAGCCGCAAAGGCAATGAAGTTAGTGGCCTTGGCAGTGCCAGTCTGGGCAGTGCGGCCTTCCAGCAGGAAGGAAGAATTTCTGTCCTGGGCCTGGACCAGCAGAAAGTCTCCCAGCCCGTTGAAGGTGAAGTTGGCATTATCCAAAGTGGTGATGTGGGGATCACCAAATGTCCAAGCTAAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29075759 220 + 31377067 CTCACCGTGACGGGG---CTCAGGCTGCGGGCCTCATAGCTCGCTGCAAAGGCAATGAAGTTGGTGGCCCGGGCGGAGCCGGTCTGGGCGGTGCGACCCAGCAGCAGGAAGGAGGAGTTTCCGTCCCAGGCCCGGACCAGCTGGAAGTCACCCAGCCCATTGAACGTGTAATTGGCACCGTCCAAGGTGGTGATGTGGGGGTCCCCAAACATCCAGGCTGGAA i canFam3.chr33 I 16 C 0 s dasNov3.JH569502 3902094 216 + 6579706 CTCACTGTGATGGGC---CCCAGGTGGCTGGAGTTGTATTGAGCAGCAAAGGCGATGAAGTTGGTAGCCTTGGCTGAGCCAGTCTGGGCAGTGCGGCCCAGCAGCAGGAAGGAAGAATTTCTGTCCCAGGCCCGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGAAATTGGCACCATCCAAGGTAGTGAAGTGGGGGTCCCCAAACATCCAGGCT---- i dasNov3.JH569502 C 0 C 0 a score=72808.000000 s hg38.chr3_KI270779v1_alt 134144 7 + 205312 GGAAAAA s panTro5.chr3 200127588 7 + 202621043 GGAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99414 7 + 190779 GGAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41647 7 - 55620 GGAAAAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888868 7 + 123690457 GGAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471498 7 + 204787373 GGAAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79225 7 + 192460366 GGAAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554491 7 + 19675229 GGAAAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 493484 7 + 16847902 GGAAAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427302 7 - 91754291 GGAAAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 590270 7 - 1977891 GAAAAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 463618 7 + 7796314 GGAAGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945309 7 - 74750902 GGAAAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469352 7 + 17725628 GGAAAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433876 7 - 6778120 GGAAAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2062 7 + 21398 GGAAAAA i aotNan1.NW_018492867v1 C 0 I 212 s micMur3.chr1 25910819 5 - 114275543 -GAAAA- i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 423962 5 - 608964 -CAAAT- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440471 7 - 98207768 GAAAGGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29075979 4 + 31377067 -GAAA-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902310 7 + 6579706 AGAAAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I a score=186297.000000 s hg38.chr3_KI270779v1_alt 134151 18 + 205312 AGAGATGCTGCCTCAGCA s panTro5.chr3 200127595 18 + 202621043 AGAGATGCCGCCTCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99421 18 + 190779 AGAGATGCCGCCTCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41654 18 - 55620 AGAGATGCCGCCTTAGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888875 18 + 123690457 AGAGATGCCGCCTCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471505 18 + 204787373 AGAGATGCCGCCTCAGCA i rheMac8.chr2 C 0 I 328 s macFas5.chr2 79232 18 + 192460366 AGAGATGCCACCTCAGCA i macFas5.chr2 C 0 I 17 s macNem1.NW_012014355v1 554498 18 + 19675229 AGAGATGCCGCCTCAGCA i macNem1.NW_012014355v1 C 0 I 324 s cerAty1.NW_012004056v1 493491 18 + 16847902 AGAGATGCCGCCTCAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427309 18 - 91754291 AGAGATGCTGCCTCAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 590277 18 - 1977891 AGAGATGCCGCCTCAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 463625 18 + 7796314 AGAGATGCCGCCTCAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945316 18 - 74750902 AGAGATACCACATCAGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469359 18 + 17725628 AGAGGTAGCACATCAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433883 18 - 6778120 AGAGATACCACATCAGCA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25910824 18 - 114275543 GGAGATACTGCATTAGCA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 423967 18 - 608964 GGAGATACCTCATTAGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440478 12 - 98207768 ---GGTTACATGCTA--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29075983 18 + 31377067 GGAGAGGCCACGCTGGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902317 18 + 6579706 AGGTGTTACGCATTGGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e aotNan1.NW_018492867v1 2069 212 + 21398 I a score=54828.000000 s hg38.chr3_KI270779v1_alt 134169 7 + 205312 TGACAAA s panTro5.chr3 200127613 7 + 202621043 TGACAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99439 7 + 190779 TGACAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41672 7 - 55620 TGACAAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888893 7 + 123690457 TGACAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79267 7 + 192460366 TGACAAA i macFas5.chr2 I 17 C 0 s cerAty1.NW_012004056v1 493509 7 + 16847902 TGACAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427327 7 - 91754291 TGACAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 590295 7 - 1977891 TGACAAA i manLeu1.NW_012102020v1 C 0 I 10367 s colAng1.NW_012118932v1 463643 7 + 7796314 TGACAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945334 7 - 74750902 TGACACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469377 7 + 17725628 TGACACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433901 7 - 6778120 TGACACA i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25910842 7 - 114275543 TGGCAAA i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 423985 7 - 608964 CGGCAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440490 5 - 98207768 -GCCAA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076001 4 + 31377067 CGGC--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902335 7 + 6579706 TGGCAAA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e aotNan1.NW_018492867v1 2069 212 + 21398 I e macNem1.NW_012014355v1 554516 324 + 19675229 I e rheMac8.chr2 202471523 328 + 204787373 I a score=24547.000000 s hg38.chr3_KI270779v1_alt 134176 8 + 205312 TCATGTGT s panTro5.chr3 200127620 8 + 202621043 TCATGTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99446 8 + 190779 TCATGTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41679 8 - 55620 TCATGCGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888900 8 + 123690457 TCATGCGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79274 8 + 192460366 CCAAGTGC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 493516 8 + 16847902 CCAAGTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427334 8 - 91754291 CCAAGTGC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 463650 8 + 7796314 CCAAGCGC i colAng1.NW_012118932v1 C 0 I 202 s calJac3.chr17 945341 8 - 74750902 CCATGGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469384 8 + 17725628 CCATGGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433908 8 - 6778120 CCATGGGT i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25910849 8 - 114275543 CCATGGGT i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 423992 8 - 608964 CTGCAGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440495 1 - 98207768 -------T i mm10.chr16 C 0 I 1 s canFam3.chr33 29076005 3 + 31377067 ---TGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902342 8 + 6579706 CCAGAAGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e aotNan1.NW_018492867v1 2069 212 + 21398 I e macNem1.NW_012014355v1 554516 324 + 19675229 I e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e rheMac8.chr2 202471523 328 + 204787373 I a score=-804.000000 s hg38.chr3_KI270779v1_alt 134184 2 + 205312 AG s panTro5.chr3 200127628 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99454 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41687 2 - 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888908 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79282 2 + 192460366 CC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 493524 2 + 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427342 2 - 91754291 CC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 463860 2 + 7796314 AG i colAng1.NW_012118932v1 I 202 C 0 s calJac3.chr17 945349 2 - 74750902 TG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469392 2 + 17725628 CG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433916 2 - 6778120 TG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25910857 2 - 114275543 AG i micMur3.chr1 C 0 I 190 s otoGar3.GL873829 424000 2 - 608964 AG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65440497 2 - 98207768 AG i mm10.chr16 I 1 C 0 s canFam3.chr33 29076008 2 + 31377067 CG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902350 2 + 6579706 AA i dasNov3.JH569502 C 0 I 1 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e aotNan1.NW_018492867v1 2069 212 + 21398 I e macNem1.NW_012014355v1 554516 324 + 19675229 I e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e rheMac8.chr2 202471523 328 + 204787373 I a score=109369.000000 s hg38.chr3_KI270779v1_alt 134186 23 + 205312 GGCTGAGGTTCCTCACTG--CAGTC s panTro5.chr3 200127630 23 + 202621043 GGCTGAGGTTCCTCACTG--CAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99456 23 + 190779 GGCTGAGGTTCCTCACTG--CAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41689 23 - 55620 GGCTGAGGTTCCTCACTG--CAGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888910 23 + 123690457 GGCTGAGATTCCTCACTG--CAGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79284 23 + 192460366 GGCTGAGATTCCTCACTG--CAGTC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 493526 23 + 16847902 GGCTGGGATTCCTCACTG--CAGTC i cerAty1.NW_012004056v1 C 0 I 1051 s chlSab2.chr15 427344 23 - 91754291 GGCTGAGATTCCTCACTG--CAGTC i chlSab2.chr15 C 0 I 314 s colAng1.NW_012118932v1 463862 23 + 7796314 GGCTGAGATTCCTCACTG--TAGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945351 23 - 74750902 GGCTGAGATTCCTCACTG--CAGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469394 16 + 17725628 GGCTGAGATTCCCTGC--------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 433918 23 - 6778120 GGCTGAGATTCCCTGCTG--CAGTC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 424003 23 - 608964 GTCTAAGATTGCCC-CTGCCCAGC- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65440499 23 - 98207768 GGCCATGGACTCTTACTC--CCAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29076010 13 + 31377067 GGGTGCGGATCCC------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902353 23 + 6579706 AGCTGAGATTTCCCACCA--CCTCC i dasNov3.JH569502 I 1 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e aotNan1.NW_018492867v1 2069 212 + 21398 I e macNem1.NW_012014355v1 554516 324 + 19675229 I e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e rheMac8.chr2 202471523 328 + 204787373 I a score=30361.000000 s hg38.chr3_KI270779v1_alt 134209 16 + 205312 -AGGTGCGGCACTTGTC s panTro5.chr3 200127653 16 + 202621043 -AGGTGCGGCACTTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99479 16 + 190779 -AGGTGCGGCACTTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41712 16 - 55620 -AGGTGCGGCACTTGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888933 16 + 123690457 -AGGTGCGGCACTTGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79307 14 + 192460366 --CGGGGGGCACCTGT- i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 463885 16 + 7796314 -AGGGGGGACACTTGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945374 16 - 74750902 -AGATAGGGCACTTGTC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 433941 16 - 6778120 -AGATAGGGCACTTGTC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 424026 16 - 608964 -AGGCAGGACATTTGTT i otoGar3.GL873829 C 0 I 138 s mm10.chr16 65440522 5 - 98207768 -AGGTA----------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3902376 16 + 6579706 CAGGCAT-ACATCTGAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e canFam3.chr33 29076023 0 + 31377067 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e macNem1.NW_012014355v1 554516 324 + 19675229 I e saiBol1.JH378146 469410 0 + 17725628 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e chlSab2.chr15 427367 314 - 91754291 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I a score=27468.000000 s hg38.chr3_KI270779v1_alt 134225 11 + 205312 CAGGAGGACTC s panTro5.chr3 200127669 11 + 202621043 CAGGAGGACTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99495 11 + 190779 CAGCAGGACTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41728 11 - 55620 CAGGAGGACTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888949 2 + 123690457 CA--------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79321 11 + 192460366 CAGGTGGACTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 427681 11 - 91754291 CAGGTGGACTC i chlSab2.chr15 I 314 C 0 s colAng1.NW_012118932v1 463901 10 + 7796314 -AGGAAGACTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945390 11 - 74750902 CAGGTGGACTC i calJac3.chr17 C 0 T 51 s cebCap1.NW_016107444v1 433957 11 - 6778120 CCGGTGGACTC i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65440527 7 - 98207768 ----AGGACTT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3902392 11 + 6579706 CTATTAGACTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e otoGar3.GL873829 424042 138 - 608964 I e canFam3.chr33 29076023 0 + 31377067 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e macNem1.NW_012014355v1 554516 324 + 19675229 I e saiBol1.JH378146 469410 0 + 17725628 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I a score=10260.000000 s hg38.chr3_KI270779v1_alt 134236 4 + 205312 AGGG s panTro5.chr3 200127680 4 + 202621043 AGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99506 4 + 190779 AGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41739 4 - 55620 AGGG i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 79332 4 + 192460366 AGGG i macFas5.chr2 C 0 I 151 s chlSab2.chr15 427692 4 - 91754291 AGGG i chlSab2.chr15 C 0 I 1 s colAng1.NW_012118932v1 463911 4 + 7796314 AGGG i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 945350 3 - 74750902 -GGG i calJac3.chr17 T 51 I 1 s dasNov3.JH569502 3902403 4 + 6579706 AAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e otoGar3.GL873829 424042 138 - 608964 I e mm10.chr16 65440534 0 - 98207768 C e canFam3.chr33 29076023 0 + 31377067 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C e macNem1.NW_012014355v1 554516 324 + 19675229 I e saiBol1.JH378146 469410 0 + 17725628 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I e nomLeu3.chr11 120888951 0 + 123690457 C a score=3276.000000 s hg38.chr3_KI270779v1_alt 134240 1 + 205312 T s panTro5.chr3 200127684 1 + 202621043 T i panTro5.chr3 C 0 I 103 s panPan2.chrUn_NW_014024201v1 99510 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41743 1 - 55620 T i gorGor5.CYUI01001831v1 C 0 I 52 s macFas5.chr2 79487 1 + 192460366 T i macFas5.chr2 I 151 C 0 s chlSab2.chr15 427697 1 - 91754291 T i chlSab2.chr15 I 1 C 0 s colAng1.NW_012118932v1 463916 1 + 7796314 T i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 945354 1 - 74750902 T i calJac3.chr17 I 1 C 0 s dasNov3.JH569502 3902407 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e otoGar3.GL873829 424042 138 - 608964 I e mm10.chr16 65440534 0 - 98207768 C e canFam3.chr33 29076023 0 + 31377067 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C e macNem1.NW_012014355v1 554516 324 + 19675229 I e saiBol1.JH378146 469410 0 + 17725628 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I e nomLeu3.chr11 120888951 0 + 123690457 C a score=31438.000000 s hg38.chr3_KI270779v1_alt 134241 23 + 205312 GAGGTTCCTCACTGCAGTCGACT s panTro5.chr3 200127788 23 + 202621043 GAGGTTCCTCACTGCAGTCGACT i panTro5.chr3 I 103 C 0 s panPan2.chrUn_NW_014024201v1 99511 23 + 190779 GAGATTCCTCACTGCAGTCGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41796 23 - 55620 GAGGTTCCTCACTGCAGTAGACT i gorGor5.CYUI01001831v1 I 52 C 0 s macFas5.chr2 79488 23 + 192460366 GGGATTCCTCACTGTAGTCAGGG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 427698 23 - 91754291 GGGATTCCTCACTGTAGTCAGGG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 463917 23 + 7796314 GGGATTCCTCACTGTAGTCAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945355 23 - 74750902 GAGATTCCTCACTGCAGTCAGAT i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 469410 11 + 17725628 ------------TGCAGTTGGCT i saiBol1.JH378146 C 0 I 1 s mm10.chr16 65440534 15 - 98207768 --------CCATCTTAGTTGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29076023 14 + 31377067 --AGCCCCCCACGGCC------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902408 6 + 6579706 -AGAGTC---------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e otoGar3.GL873829 424042 138 - 608964 I e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C e macNem1.NW_012014355v1 554516 324 + 19675229 I e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I e nomLeu3.chr11 120888951 0 + 123690457 C a score=9690.000000 s hg38.chr3_KI270779v1_alt 134264 2 + 205312 GG s panTro5.chr3 200127811 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99534 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41819 2 - 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 79511 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554840 2 + 19675229 GG i macNem1.NW_012014355v1 I 324 C 0 s chlSab2.chr15 427721 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 463940 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945379 2 - 74750902 GG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 469422 2 + 17725628 GG i saiBol1.JH378146 I 1 C 0 s mm10.chr16 65440549 2 - 98207768 AG i mm10.chr16 C 0 I 1 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e otoGar3.GL873829 424042 138 - 608964 I e dasNov3.JH569502 3902414 0 + 6579706 C e canFam3.chr33 29076037 0 + 31377067 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I e nomLeu3.chr11 120888951 0 + 123690457 C a score=-4120.000000 s hg38.chr3_KI270779v1_alt 134266 2 + 205312 GG s panTro5.chr3 200127813 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99536 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41821 2 - 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 s macFas5.chr2 79513 2 + 192460366 GA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554842 2 + 19675229 GA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 427723 2 - 91754291 GA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 463942 2 + 7796314 GA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945381 1 - 74750902 G- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469424 1 + 17725628 G- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 424180 2 - 608964 GA i otoGar3.GL873829 I 138 C 0 s mm10.chr16 65440552 1 - 98207768 G- i mm10.chr16 I 1 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e dasNov3.JH569502 3902414 0 + 6579706 C e canFam3.chr33 29076037 0 + 31377067 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I e rheMac8.chr2 202471523 328 + 204787373 I e nomLeu3.chr11 120888951 0 + 123690457 C a score=62569.000000 s hg38.chr3_KI270779v1_alt 134268 13 + 205312 CACTTGTCCGGGC s panTro5.chr3 200127815 13 + 202621043 CACTTGTCCGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99538 13 + 190779 CACTTGTCCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41823 13 - 55620 CACTTGTCCGGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888951 3 + 123690457 ----------GGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471851 13 + 204787373 CACTTGTCCAGGT i rheMac8.chr2 I 328 C 0 s macFas5.chr2 79515 13 + 192460366 CACTTGTCCAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554844 13 + 19675229 CACTTGTCCAGGT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 427725 13 - 91754291 CACTTGTCCAGGT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 463944 13 + 7796314 CACTTGTCCAGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945382 13 - 74750902 CACTTGTCCAGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469425 13 + 17725628 CACTTGTCCAGGT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 424182 13 - 608964 CATTTGTCCAGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440553 1 - 98207768 --------C---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076037 7 + 31377067 ------TCCAGGC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e dasNov3.JH569502 3902414 0 + 6579706 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C e manLeu1.NW_012102020v1 590302 10367 - 1977891 I e cerAty1.NW_012004056v1 493549 1051 + 16847902 I a score=42795.000000 s hg38.chr3_KI270779v1_alt 134281 5 + 205312 GGACT s panTro5.chr3 200127828 5 + 202621043 GGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99551 5 + 190779 GGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41836 5 - 55620 AGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888954 5 + 123690457 GGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471864 5 + 204787373 GGACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79528 5 + 192460366 GGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554857 5 + 19675229 GGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494600 5 + 16847902 GGACT i cerAty1.NW_012004056v1 I 1051 C 0 s chlSab2.chr15 427738 5 - 91754291 GGACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600669 5 - 1977891 GGACT i manLeu1.NW_012102020v1 I 10367 C 0 s colAng1.NW_012118932v1 463957 5 + 7796314 GGACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945395 5 - 74750902 GGACT i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 469438 5 + 17725628 GGGCT i saiBol1.JH378146 C 0 I 1 s otoGar3.GL873829 424195 5 - 608964 GTCCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29076044 5 + 31377067 CAACT i canFam3.chr33 C 0 I 1 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e mm10.chr16 65440554 0 - 98207768 C e dasNov3.JH569502 3902414 0 + 6579706 C e aotNan1.NW_018492867v1 2069 212 + 21398 I e cebCap1.NW_016107444v1 433968 0 - 6778120 C a score=919091.000000 s hg38.chr3_KI270779v1_alt 134286 124 + 205312 CAG---CTGGGGAGATGTTCACAGAGCACAGAATCCTCCCCTCAAGCCTCCTTGCATTTTCGTGCC---C-----------------------------C-----GCTATTCTCACTCCTTC-------CCCAAC-TCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGACCATCCA-CCCAT s panTro5.chr3 200127833 124 + 202621043 CAG---CTGGGGAGATGTTCACGGAGCACAGAATCCTCCCCTCAAGCCTCCTTGCATTTTCGTGCC---C-----------------------------C-----GCTATTCTCACTCCTTC-------CCCAAC-TCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGACCGTCTG-CCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99556 124 + 190779 CAG---CTGGGGAGATGTTCACGGAGCACAGAATCCTCCCCTCAAGCCTCCTTGCATTTTCGTGCC---C-----------------------------C-----GCTATTCTCACTCCTTC-------CCCAAC-TCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGACCGTCTG-CCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41841 124 - 55620 CAG---CTGGGGAGATGTTCACGGAGCACAGAATCCTCCCCTCAAGCCTCCTTGCATTTTCGTGCC---C-----------------------------G-----GCTGTTCTCACTCCTTC-------CCCAAC-TCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGACCATCCG-CCCAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120888959 121 + 123690457 CAG---CTGGG--GATGTTCAGAGAGCACAGAATCCTCCCCTCAAGGCTTCTTGCA-TTTCATGCC---C-----------------------------C-----GCTACTCTCACTCCTTC-------CCCAAC-TCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGACCGTCCG-CCCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471869 125 + 204787373 CAG---CAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTCACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79533 125 + 192460366 CAG---CAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTCACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554862 125 + 19675229 CAG---CAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTCACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494605 125 + 16847902 CAG---CAGGGGAGATGTTCACAGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTCACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427743 125 - 91754291 CAG---CAGGGGAGATGTTCACGGAGCACAGATTCCTTCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTCACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600674 125 - 1977891 CAG---CAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTCACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 463962 125 + 7796314 TAG---CACAGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---C-----------------------------C-----ACTATTCTTACTCCTTC-------CCCAACACCAGGTACAA-------------------------------------------------AGCCCC---------------------------------------------------------------------------------TCCACTGGCCGTCCG-CCCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945401 119 - 74750902 CAG---CTGGGGAGATGTTC-----TCATCGAATCCTCCCCTCAAGGCCCC-TGCACTTTCGTGCC---C-----------------------------C-----CC-ATTCTCACTCCTTC-------TCCAGCACCAGGTACAA-------------------------------------------------AGGGCC---------------------------------------------------------------------------------TCCATTTGCCATCAGCCCCAT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 469444 112 + 17725628 CAG---CTGGGGAGATGTTC-----TCATAGAATCCTCCCCTCAAGGCCCC-------TTCGTGCC---C-----------------------------C-----CC--TTCTCACTCCTTC-------CCCAGCACCAGGTACAA-------------------------------------------------AGGGCC---------------------------------------------------------------------------------TCCATTTGCCATCAGCCCCAT i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 433968 119 - 6778120 CAG---CTGGGGAGGTGTTC-----TCATAGAATCCTCCCCTCAAGGCCCC-TGCACTTTCGTGCT---C-----------------------------C-----CC-ATTCTCACTCCTTC-------CCCAGCACCAGGTACAA-------------------------------------------------AGGGCC---------------------------------------------------------------------------------TCCATTTGCCATCAGCCCCAT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 424200 261 - 608964 CAAGTCCTAGGGAGATATTTGTGGAGAACAGAATCTTCCC--TGAGGCCTCTTGCACTTTTGTGTC---C-----------------------------TTAACACCCATTCTCACCCCTTG-------CCCAATGCCACGCACAAAAATGCCCCATTTGGTggtggcgcctgtggttcaaaggagtagggctccagccccatataccagaggtggtgggttcaaacccagccctggccaaaaaaactgcaaaaCATCCCAAAAGAACAACAAAAAACACATCCCATTTGCCATCAGCCCCA- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440554 123 - 98207768 ------TTGGGCAAATTCTCCAGGCATCCAGAATCTACCCCCAAAGTCCTCTTCCCTTGTAGTCCCTGGC-----------------------------C-----TCAGTCCTCATCCCTTT-------GCAAAAGCCATGTCCAA-------------------------------------------------AGTCCC---------------------------------------------------------------------------------T--GTTTGCTGTTAGCTTCA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076050 56 + 31377067 AGG---CCCGCGAGATGCTCACGGAGTAGAGAACATCCCC---AAAgc---------------gcc---c-----------------------------c-----cc-------------cc-------cccgg------------------------------------------------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3902414 151 + 6579706 -------------GATGTTGATGGAGTAGAGAATTCTCCCTGGAAGCCTTCTTGCCCTTTTGGGCC---CTCCACCTTGTCCATGTCTGCTTATTATCTC-----CCCATCCCTACCCCTTCTCTCTTTCCCAGCCCCATGTACAA-------------------------------------------------AGTCCC---------------------------------------------------------------------------------TCCATTTGCCATTGGCACCA- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7425768 219 + 22200726 I e micMur3.chr1 25910859 190 - 114275543 I e aotNan1.NW_018492867v1 2069 212 + 21398 I a score=95423.000000 s hg38.chr3_KI270779v1_alt 134410 8 + 205312 CACTGGCG s panTro5.chr3 200127957 8 + 202621043 CACTGGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99680 8 + 190779 CACTGGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41965 8 - 55620 CACTGGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889080 8 + 123690457 CACTGGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202471994 8 + 204787373 CACTGGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79658 8 + 192460366 CACTGGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554987 8 + 19675229 CACTGGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494730 8 + 16847902 CACTGGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427868 8 - 91754291 CACTGGCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600799 8 - 1977891 CACTGGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464087 8 + 7796314 CACTGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945520 8 - 74750902 CACTGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469556 8 + 17725628 CACTGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434087 8 - 6778120 CACTGGCA i cebCap1.NW_016107444v1 C 0 C 0 s proCoq1.NW_012133858v1 7425987 8 + 22200726 CACTGGAA i proCoq1.NW_012133858v1 I 219 C 0 s otoGar3.GL873829 424461 8 - 608964 CACTGGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440677 8 - 98207768 CGCAAGAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29076106 8 + 31377067 cgcccAAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902565 8 + 6579706 CACTGGAA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25910859 190 - 114275543 I e aotNan1.NW_018492867v1 2069 212 + 21398 I a score=31058.000000 s hg38.chr3_KI270779v1_alt 134418 3 + 205312 TCA s panTro5.chr3 200127965 3 + 202621043 TCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99688 3 + 190779 TCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41973 3 - 55620 TCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889088 3 + 123690457 TCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472002 3 + 204787373 TCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79666 3 + 192460366 TCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554995 3 + 19675229 TCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494738 3 + 16847902 TCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427876 3 - 91754291 TCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600807 3 - 1977891 TCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464095 3 + 7796314 TCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945528 3 - 74750902 CCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469564 3 + 17725628 GCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434095 3 - 6778120 CCC i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25911049 3 - 114275543 TCA i micMur3.chr1 I 190 C 0 s proCoq1.NW_012133858v1 7425995 3 + 22200726 TCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 424469 3 - 608964 TCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440685 2 - 98207768 -CT i mm10.chr16 C 0 I 1 s canFam3.chr33 29076114 3 + 31377067 TCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902573 3 + 6579706 GCA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 2069 212 + 21398 I a score=527955.000000 s hg38.chr3_KI270779v1_alt 134421 34 + 205312 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ s panTro5.chr3 200127968 34 + 202621043 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99691 34 + 190779 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 41976 34 - 55620 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889091 34 + 123690457 TCTCCATC-TTCCCTTGTGGCCACGGCTCTGCCCC------------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472005 34 + 204787373 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79669 34 + 192460366 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 554998 34 + 19675229 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494741 34 + 16847902 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427879 34 - 91754291 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600810 34 - 1977891 TCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464098 34 + 7796314 TCTTCATC-TTCCCTTGTGGCGACAGCTCTGCCCC------------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945531 35 - 74750902 TCTCCATCTTTCCCTTGTGGCCACAGCTCTGCCCC------------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469567 34 + 17725628 TCTCCGTC-TTCCCTTGTGGCCACAGCTCTGCCCC------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434098 33 - 6778120 TCTCCATC-TTCCC-TGTGGCCACAGCTCTGCCCC------------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2281 34 + 21398 TCTCCATC-TTCCCTGTGGGCCACAGCTCTGCCCC------------ i aotNan1.NW_018492867v1 I 212 C 0 s micMur3.chr1 25911052 34 - 114275543 TCTTCTTC-CTCCCTTGTGGCCACAGCTCTGCCCC------------ i micMur3.chr1 C 0 I 71 s proCoq1.NW_012133858v1 7425998 34 + 22200726 TCTCCTTC-TTCCCTTGTGGCCACGGCTCTGCCCC------------ i proCoq1.NW_012133858v1 C 0 I 71 s otoGar3.GL873829 424472 34 - 608964 TGTCCATC-TTCCCTTGTGGCCACAACTCTGGCCA------------ i otoGar3.GL873829 C 0 I 10 s mm10.chr16 65440688 30 - 98207768 TCAACATC-ATCCC-TGTGGCTGCAGTTCTGT--------------- i mm10.chr16 I 1 C 0 s canFam3.chr33 29076117 22 + 31377067 ----CATC-TACGGTTGC--------TTCGGCCCC------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902576 45 + 6579706 TCCTCACC-TTCCC-TGTGGCTACAGCTCTGTGCCAGGAAACTAGTC i dasNov3.JH569502 C 0 C 0 a score=141440.000000 s hg38.chr3_KI270779v1_alt 134455 15 + 205312 TACTCCTTATCCAGA s panTro5.chr3 200128002 15 + 202621043 TACTCCTTATCCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99725 15 + 190779 TACTCCTTATCCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42010 15 - 55620 TACTCCTTATCCAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889125 15 + 123690457 TACTGCTCATCCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472039 15 + 204787373 TACTCCTCATCCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79703 15 + 192460366 TACTCCTCATCCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555032 15 + 19675229 TACTCCTCATCCAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494775 15 + 16847902 TACTCCTCATCCAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427913 15 - 91754291 TACTCCTCATCCAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600844 15 - 1977891 TACTCCTCATCCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464132 15 + 7796314 TACTCCTCATGCAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945566 15 - 74750902 TACTCCTCATTCAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469601 15 + 17725628 TACTCCTCCTCCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434131 15 - 6778120 TACTCCTCATCCAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2315 15 + 21398 TACGCCTCATCCAGA i aotNan1.NW_018492867v1 C 0 I 61 s otoGar3.GL873829 424516 15 - 608964 TGGTCCTGCCCCATG i otoGar3.GL873829 I 10 C 0 s mm10.chr16 65440718 6 - 98207768 ---------TTAGGA i mm10.chr16 C 0 I 3 s canFam3.chr33 29076139 7 + 31377067 -------CTCCCGG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902621 15 + 6579706 CGTCCCTGGCTCAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426032 71 + 22200726 I e micMur3.chr1 25911086 71 - 114275543 I a score=408278.000000 s hg38.chr3_KI270779v1_alt 134470 50 + 205312 TGCCACCTCCCGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTG s panTro5.chr3 200128017 50 + 202621043 TGCCACCTCCCGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99740 50 + 190779 TGCCACCTCCCGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42025 50 - 55620 TGCCACCTCCCGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889140 50 + 123690457 CGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472054 50 + 204787373 TGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79718 50 + 192460366 TGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555047 50 + 19675229 TGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494790 50 + 16847902 TGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427928 50 - 91754291 TGCCACCTCCTGGAAGTCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600859 50 - 1977891 CGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464147 50 + 7796314 CGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945581 47 - 74750902 --CGTCATCCCGGAGGCCCAGAAGCT-CCCCTCCCCAGATGCTCTGCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469616 47 + 17725628 --CGTCGTCCCGGAGGCCCAGAAGCT-CCCCTCCCCAGATGCTCTGCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434146 46 - 6778120 --CGTCGTCCCAGAGG-CCAGAAGCT-CCCCTCCCCAGATGCTCTGCCTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 424531 36 - 608964 -------TCCCAAAGG-CCACAGGCTACCCTGCCCCAGACGCTG------ i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65440727 24 - 98207768 TGGCCCCTT--------------GCTAATCCACCCCAA------------ i mm10.chr16 I 3 C 0 s canFam3.chr33 29076146 25 + 31377067 TGCCAC-----------CCACAAGGCCCCTC--------GGTTG------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902636 50 + 6579706 CTCCTTATTCCAGAGGCTAACAGGCCACCCCGCCCAAGATGCTCTACCTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426032 71 + 22200726 I e micMur3.chr1 25911086 71 - 114275543 I e aotNan1.NW_018492867v1 2330 61 + 21398 I a score=6734.000000 s hg38.chr3_KI270779v1_alt 134520 1 + 205312 G s panTro5.chr3 200128067 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99790 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42075 1 - 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889190 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472104 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79768 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555097 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494840 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427978 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600909 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464197 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945628 1 - 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469663 1 + 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434192 1 - 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29076171 1 + 31377067 G i canFam3.chr33 C 0 I 8 s dasNov3.JH569502 3902686 1 + 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426032 71 + 22200726 I e micMur3.chr1 25911086 71 - 114275543 I e otoGar3.GL873829 424567 1 - 608964 I e mm10.chr16 65440751 0 - 98207768 C e aotNan1.NW_018492867v1 2330 61 + 21398 I a score=119206.000000 s hg38.chr3_KI270779v1_alt 134521 15 + 205312 GCCTGGGCCCTGTCG s panTro5.chr3 200128068 15 + 202621043 GCCTGGGCCCTGTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99791 15 + 190779 GCCTGGGCCCTGTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42076 15 - 55620 GCCTGGGCCCTGTTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889191 15 + 123690457 GCCTGGGCCCTGTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472105 15 + 204787373 GCCTGGGCCCTGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79769 15 + 192460366 GCCTGGGCCCTGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555098 15 + 19675229 GCCTGGGCCCTGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494841 15 + 16847902 GCCTGGGCCCTGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427979 15 - 91754291 GCCTGGGCCCTGACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600910 15 - 1977891 GCCTGGGCCCTGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464198 15 + 7796314 GCCTGGGCCCTGACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945629 14 - 74750902 GCCTGGCCCTGACC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469664 14 + 17725628 GCCTGGACCTGACC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434193 14 - 6778120 GCCTGGACCTGACC- i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25911157 15 - 114275543 GCCTGGGCCCTGACC i micMur3.chr1 I 71 C 0 s proCoq1.NW_012133858v1 7426103 15 + 22200726 GCCTGAGCCCTGACC i proCoq1.NW_012133858v1 I 71 C 0 s otoGar3.GL873829 424568 15 - 608964 GCCTGGGCTTTGCCC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65440751 8 - 98207768 -------CCATGATG i mm10.chr16 C 0 C 0 s canFam3.chr33 29076180 12 + 31377067 GCCCTGCCCAGG--- i canFam3.chr33 I 8 C 0 s dasNov3.JH569502 3902687 15 + 6579706 GCCCTGACCCCAGCA i dasNov3.JH569502 C 0 I 2 e aotNan1.NW_018492867v1 2330 61 + 21398 I a score=2155799.000000 s hg38.chr3_KI270779v1_alt 134536 120 + 205312 CTCACCGGGCTGTGGGGGCCTGTATGTAGCACAGCCCACGTGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGTGGCTCCAGTTC s panTro5.chr3 200128083 120 + 202621043 CTCACCGGGCCGTGGGGGCCTGTATGTAGCACAGCCCACGTGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99806 120 + 190779 CTCACCGGGCCGTGGGGGCCTGTATGTAGCACAGCCCACGTGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42091 120 - 55620 CTCACCAGGCCGTGGGGGCCTGTATGTAGCACAGCCCACGTGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889206 120 + 123690457 CTCACCAGGCCGTGGGGGCCTGTATGTAGCACAGCCCACGCGGGGCCGCTTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472120 120 + 204787373 CTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79784 120 + 192460366 CTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555113 120 + 19675229 CTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494856 120 + 16847902 CTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGTCCACGCGGGGCCGCCTCTGCTGGTACAAGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 427994 120 - 91754291 CTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACACGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTCAGGCTTGTCATTCCAGAGGCAGCACCAGCTCTGCGGTTCCAGTTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 600925 120 - 1977891 CTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464213 120 + 7796314 CTCACCGGGCCATGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGCTCTGTGGTTCCAGCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945643 120 - 74750902 CTCACCGGGCCGTGGTGGCCTGTATGCAGCGCAGCCTACTCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469678 120 + 17725628 CTCACCGGGCCGCGGGGGCCTGTGCGCAGCGCAGCCTACTCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTACGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434207 120 - 6778120 CTCACCGGGCCGCAGGGGCCGATACGAAGCGCAGCCTACTCGGGGACGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2391 116 + 21398 CTCACCGGGCCGTGGGGG-CTGTACGCAGCGCAGCCTACTCGGG--CGCCTCTGCTGGTACA-GGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTCC i aotNan1.NW_018492867v1 I 61 C 0 s micMur3.chr1 25911172 120 - 114275543 CTCACCTGGCCGTGGGGGCCTGTATCCAGCACAGCCAATGCAGGGACGCCTCTGCCGGTACTGGGTGCAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGTTATACGGCTCCAGTTC i micMur3.chr1 C 0 I 161 s proCoq1.NW_012133858v1 7426118 120 + 22200726 CTCACCGGGCCGTGGGGGCCTGTATCCAGCACAGCCAACGCGGGGCCGCCGCAGCCAGTACTGGGTGCAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGTCCTGCGGCTCCAGTTC i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 424583 120 - 608964 CTCACCAGGCCGTGGTGGTCGGTACCCAGCACAGCTGATGGGCGGCCGCCTCTGCTGGTACAGGGCGCAGAGGTAGGGCTTATCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440759 120 - 98207768 CTCACCGGGCCGTGGGGGCCTGTACCCAGCACAGCTGACACGGGGCCGCCTAAGCTGGTACCAGACACAGAACGAGGGCTTGTCGTTCCATTGGCAGCACCAGTTCTGTGCCTCCTGCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29076192 120 + 31377067 CTCACCGGGCCTCGGGGGCCGGTACCCGGCGCAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCGCAGAGCATGGGCCGGTCGCTCCAGCGGCAGCACCAGTTCTGGGGCTCCAGTTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902704 117 + 6579706 CTCACCGAGGCGTGGAGGCCTATAGCCAGCACAGCTGATGCGAGGCCACCTTTGCTGGTACAGGGCACAAAAGAAGGGCTTG---CTCCAGCGGCAGCACCAGTTCTGCGGTTCCAGTTC i dasNov3.JH569502 I 2 C 0 a score=16013.000000 s hg38.chr3_KI270779v1_alt 134656 1 + 205312 C s panTro5.chr3 200128203 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99926 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42211 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889326 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472240 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79904 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555233 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494976 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428114 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601045 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464333 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945763 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469798 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434327 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2507 1 + 21398 T i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7426238 1 + 22200726 C i proCoq1.NW_012133858v1 C 0 I 215 s otoGar3.GL873829 424703 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440879 1 - 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr33 29076312 1 + 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902821 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25911292 161 - 114275543 I a score=573098.000000 s hg38.chr3_KI270779v1_alt 134657 48 + 205312 TGGGCTGCGGAGAACAGCA-GTGAGTCG-------GGGAGGTTGAGGACCTGGAGA s panTro5.chr3 200128204 48 + 202621043 TGGGCTGCGGAGAACAGCA-GTGAGTCG-------GGGAGGTTGAGGACCTGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99927 48 + 190779 TGGGCTGCGGAGAACAGCA-GTGAGTCG-------GGGAGGTTGAGGACCTGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42212 48 - 55620 TGGGCTGCGGAGAACAGCA-GTGAGTCG-------GGGAGGTTGAGGACCTGGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889327 48 + 123690457 TGGGCTGCGGAGAAGAGCA-GTGAGCTG-------GGGAGGCTGAGGACCTGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472241 48 + 204787373 GGGGCTGCAGAGAGGAGCA-GTGAGTCG-------GGGAGGCTGAGGACCTGGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79905 48 + 192460366 GGGGCTGCAGAGAGGAGCA-GTGAGTCG-------GGGAGGCTGAGGACCTGGAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555234 48 + 19675229 GGGGCTGCAGAGAGGAGCA-GTGAGTCG-------GGGAGGCTGAGGACCTGGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 494977 48 + 16847902 GGGGCTGCAGAGAAGAGCA-GTGAGTCG-------GGGAGGCTGAGGACCTGGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428115 48 - 91754291 GGGGCTGCAGAGAAGAGCA-GTGAGTCA-------GGGAGGCTGAGGACCTGGAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601046 48 - 1977891 GGGGCTGCAGAGAAGAGCA-GTGAGTCG-------GGGAGGCTGAGGACCTGGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464334 48 + 7796314 TGGGCTGCAGAGAAGAGCA-GTGAGTCA-------GGGAGGCTGAGGACCTGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945764 48 - 74750902 TGGGCTGTGGAGAAGAGCA-GTGAGTCG-------GGGAGGCCGAGGACCTGGAGA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 469799 55 + 17725628 TGGGCTGCGGAGAAGAGCA-GTGAGTCGGGAGGCCGGGAGGCCGAGGACCTGGAGA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 434328 48 - 6778120 TGGGCTGTGGAGAAGAGCA-GGGGGTCA-------GGGAGGCTGAGGACCTGGAGA i cebCap1.NW_016107444v1 C 0 I 7 s aotNan1.NW_018492867v1 2508 46 + 21398 --GGCTGCAGAGAAGAGCA-GTGAGTCA-------GGGAGGCGGAGGACCTGGAGA i aotNan1.NW_018492867v1 C 0 I 36 s otoGar3.GL873829 424704 49 - 608964 CGGTCTGTGGAGAAGAACA-GCATGTTGA------GGGAGGTAGAGGACCTGGAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440880 47 - 98207768 TCATCTGTGAAGAAGGACA-GTTTGTCA-------GAG-GGCGGGGGCCCCGGGGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29076313 49 + 31377067 CGGCCTGTGGGGGAGAGCACATGTTGCG-------GGGAGACGCAGGACCTGCAGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902822 41 + 6579706 TGATCTGTGAAGAAGAGGA-GCATGTTG--------------TGAGGAGATGAAGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I a score=10920.000000 s hg38.chr3_KI270779v1_alt 134705 1 + 205312 A s panTro5.chr3 200128252 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99975 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42260 1 - 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889375 1 + 123690457 A i nomLeu3.chr11 C 0 I 6 s rheMac8.chr2 202472289 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79953 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555282 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495025 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428163 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601094 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464382 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 424753 1 - 608964 A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65440927 1 - 98207768 A i mm10.chr16 C 0 I 2 s canFam3.chr33 29076362 1 + 31377067 A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902863 1 + 6579706 A i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e calJac3.chr17 945812 1 - 74750902 I e saiBol1.JH378146 469854 1 + 17725628 I a score=5519.000000 s hg38.chr3_KI270779v1_alt 134706 7 + 205312 GCTTGGC s panTro5.chr3 200128253 7 + 202621043 GCTTggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99976 7 + 190779 GCTTggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42261 7 - 55620 GCTAggc i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202472290 6 + 204787373 -CCCAGC i rheMac8.chr2 C 0 I 1 s macFas5.chr2 79954 6 + 192460366 -CCCAGC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 555283 6 + 19675229 -CCCAGC i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 495026 6 + 16847902 -CCCAGC i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 428164 6 - 91754291 -CCCAGC i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 601095 6 - 1977891 -CCCAGC i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 464383 6 + 7796314 -CCCAGC i colAng1.NW_012118932v1 C 0 I 13 s calJac3.chr17 945813 3 - 74750902 -CCC--- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 469855 3 + 17725628 -CCC--- i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 424754 6 - 608964 -CCCAGC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65440930 7 - 98207768 AACTGGC i mm10.chr16 I 2 C 0 s canFam3.chr33 29076363 2 + 31377067 -CC---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3902864 2 + 6579706 AC----- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e nomLeu3.chr11 120889376 6 + 123690457 I a score=1540.000000 s hg38.chr3_KI270779v1_alt 134713 4 + 205312 AGGG s panTro5.chr3 200128260 4 + 202621043 aggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99983 4 + 190779 aggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42268 4 - 55620 aggg i gorGor5.CYUI01001831v1 C 0 C 0 s otoGar3.GL873829 424761 3 - 608964 -GGG i otoGar3.GL873829 I 1 I 1 s mm10.chr16 65440937 3 - 98207768 ATG- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e dasNov3.JH569502 3902866 0 + 6579706 C e canFam3.chr33 29076365 0 + 31377067 C e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e macNem1.NW_012014355v1 555289 1 + 19675229 I e calJac3.chr17 945816 0 - 74750902 C e saiBol1.JH378146 469858 0 + 17725628 C e colAng1.NW_012118932v1 464389 13 + 7796314 I e manLeu1.NW_012102020v1 601101 1 - 1977891 I e chlSab2.chr15 428170 1 - 91754291 I e cerAty1.NW_012004056v1 495032 1 + 16847902 I e macFas5.chr2 79960 1 + 192460366 I e rheMac8.chr2 202472296 1 + 204787373 I e nomLeu3.chr11 120889376 6 + 123690457 I a score=11517.000000 s hg38.chr3_KI270779v1_alt 134717 24 + 205312 CAGGGTGGTGTTGGTTGAGAGCTT s panTro5.chr3 200128264 24 + 202621043 cagggtggtgttggtggagagctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 99987 24 + 190779 cagggtggtgttggtggagagctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42272 19 - 55620 cagggcggtgttggtggag----- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202472297 9 + 204787373 ---------------GGAGAGCTG i rheMac8.chr2 I 1 C 0 s macFas5.chr2 79961 9 + 192460366 ---------------GGAGAGCTG i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 555290 9 + 19675229 ---------------GGAGAGCTG i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 495033 9 + 16847902 ---------------GGAGAGCTG i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 428171 9 - 91754291 ---------------GGAGAGCTG i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 601102 9 - 1977891 ---------------GGAGAGCTG i manLeu1.NW_012102020v1 I 1 C 0 s mm10.chr16 65440940 3 - 98207768 ---------------------TTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29076365 13 + 31377067 -----------CAGCTGGGGGTTT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e otoGar3.GL873829 424764 1 - 608964 I e dasNov3.JH569502 3902866 0 + 6579706 C e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e calJac3.chr17 945816 0 - 74750902 C e saiBol1.JH378146 469858 0 + 17725628 C e colAng1.NW_012118932v1 464389 13 + 7796314 I e nomLeu3.chr11 120889376 6 + 123690457 I a score=-9186.000000 s hg38.chr3_KI270779v1_alt 134741 9 + 205312 GGCAGGGCA s panTro5.chr3 200128288 9 + 202621043 ggcagggca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100011 9 + 190779 ggcagggca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42291 9 - 55620 agcttggca i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202472306 2 + 204787373 GG------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79970 2 + 192460366 GG------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555299 2 + 19675229 GG------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495042 9 + 16847902 GGTGGGGCA i cerAty1.NW_012004056v1 C 0 I 140 s chlSab2.chr15 428180 2 - 91754291 GG------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601111 2 - 1977891 GG------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464402 4 + 7796314 -----GGCA i colAng1.NW_012118932v1 I 13 C 0 s mm10.chr16 65440943 4 - 98207768 -----GGAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29076378 5 + 31377067 ----GGGCA i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e otoGar3.GL873829 424764 1 - 608964 I e dasNov3.JH569502 3902866 0 + 6579706 C e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e calJac3.chr17 945816 0 - 74750902 C e saiBol1.JH378146 469858 0 + 17725628 C e nomLeu3.chr11 120889376 6 + 123690457 I a score=-103867.000000 s hg38.chr3_KI270779v1_alt 134750 62 + 205312 G--GGCGGTGTTGGTGGAGAGCTTGGCAGGGCAGGGCGGTGTTGGT-----GGAGAGCT-----TGGCAG-----------------------------------------------------GGCA s panTro5.chr3 200128297 5 + 202621043 g--ggc------------------------------------------------------------------------------------------------------------------------a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100020 5 + 190779 g--ggc------------------------------------------------------------------------------------------------------------------------a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42300 36 - 55620 g--ggc--------------------------agggcggtgttggt-----ggagagct-----tggcag-----------------------------------------------------ggca i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202472308 39 + 204787373 T--GGC--------------------------AGGGCGGGGTCAGT-----GGAGAGCTTG--GTGGCAG-----------------------------------------------------GTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 79972 39 + 192460366 T--ggc--------------------------agggcggggtcagt-----gaagagcttg--gtggcag-----------------------------------------------------ggca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555301 39 + 19675229 T--ggc--------------------------agggcggggtcagt-----ggagagcttg--gtggcag-----------------------------------------------------ggca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495191 39 + 16847902 T--GGC--------------------------AGGGCAGGGTCGGT-----GGAGAGCTGG--GTGGCAG-----------------------------------------------------GGCA i cerAty1.NW_012004056v1 I 140 C 0 s chlSab2.chr15 428182 14 - 91754291 TGGGGC--------------------------AGGGCGGT--------------------------------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601113 94 - 1977891 TGGGGC--------------------------AGGGCCGTGTCGGT-----GGAGAGCTTG--GTGGCAGGGCAGAGTCAGTGGAGAGCTTGGTGGCAGGGCAGGGTCAGTGGAGAGCTGGGTGGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464406 39 + 7796314 G--GGC--------------------------AGGGCGATGTCGGT-----GGAGAGCTTG--GTGGCAG-----------------------------------------------------GGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945816 3 - 74750902 ---AGC------------------------------------------------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469858 3 + 17725628 ---AGC------------------------------------------------------------------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65440947 41 - 98207768 G--AGT--------------------------ATGGTGATATCAGCAGCAAGAGGAGTCAGGCGTGGCA---------------------------------------------------------- i mm10.chr16 C 0 I 58 s dasNov3.JH569502 3902866 13 + 6579706 ---------------------------------TGGAGAGCTCAGC--------------------------------------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e otoGar3.GL873829 424764 1 - 608964 I e canFam3.chr33 29076383 0 + 31377067 C e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e nomLeu3.chr11 120889376 6 + 123690457 I a score=45591.000000 s hg38.chr3_KI270779v1_alt 134812 12 + 205312 GGGCGGTGTTGG s panTro5.chr3 200128302 12 + 202621043 gggcGGTGTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100025 12 + 190779 gggcGGTGTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42336 12 - 55620 gggcGGTGTTGG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202472347 12 + 204787373 GGGCAGTGTCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80011 12 + 192460366 gggcagtgtcgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555340 12 + 19675229 gggcagtgtcgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495230 12 + 16847902 GGGCAGTGTCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428196 5 - 91754291 -------GTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601207 12 - 1977891 GGGCAGGGTCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464445 12 + 7796314 GGGTGGTGTCGG i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e otoGar3.GL873829 424764 1 - 608964 I e mm10.chr16 65440988 58 - 98207768 I e dasNov3.JH569502 3902879 0 + 6579706 C e canFam3.chr33 29076383 0 + 31377067 C e aotNan1.NW_018492867v1 2554 36 + 21398 I e cebCap1.NW_016107444v1 434376 7 - 6778120 I e calJac3.chr17 945819 0 - 74750902 C e saiBol1.JH378146 469861 0 + 17725628 C e nomLeu3.chr11 120889376 6 + 123690457 I a score=86328.000000 s hg38.chr3_KI270779v1_alt 134824 10 + 205312 TGGAGAGCTT s panTro5.chr3 200128314 10 + 202621043 TGGAGAGCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100037 10 + 190779 TGGAGAGCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42348 10 - 55620 TGGAGAGCTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889382 10 + 123690457 TGGAGAGCTT i nomLeu3.chr11 I 6 C 0 s rheMac8.chr2 202472359 10 + 204787373 TGGAGAGCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80023 10 + 192460366 tggagagctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555352 10 + 19675229 tggagagctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495242 10 + 16847902 TGGAGAGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428201 10 - 91754291 TGGAGAGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601219 10 - 1977891 TGGAGAGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464457 10 + 7796314 TGGAGAGCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945819 10 - 74750902 TGGAGAGCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469861 10 + 17725628 TGGAGAGCGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434383 10 - 6778120 TGGAGAGCGT i cebCap1.NW_016107444v1 I 7 C 0 s dasNov3.JH569502 3902879 10 + 6579706 TGGAAGGTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e otoGar3.GL873829 424764 1 - 608964 I e mm10.chr16 65440988 58 - 98207768 I e canFam3.chr33 29076383 0 + 31377067 C e aotNan1.NW_018492867v1 2554 36 + 21398 I a score=147143.000000 s hg38.chr3_KI270779v1_alt 134834 16 + 205312 GGTAGGGCAGGGCGGT s panTro5.chr3 200128324 16 + 202621043 GGTAgggcagggtggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100047 16 + 190779 GGTAgggcagggtggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42358 16 - 55620 GGTAgggcagggtggt i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889392 16 + 123690457 GGCAGGGCAGGGCGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472369 16 + 204787373 GGTAGGACGGGGTGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80033 16 + 192460366 ggtaggacggggTGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555362 16 + 19675229 ggtaggATGGGGTGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495252 16 + 16847902 GGTAGGACGGGGTGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428211 16 - 91754291 GGTggggcagggtggt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601229 16 - 1977891 GGTAGGACGGGGTGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464467 16 + 7796314 GGTAGGACGGGGTGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945829 16 - 74750902 GGCAGGGCAGGACGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469871 15 + 17725628 GGCAGGGCGGGAC-GT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434393 16 - 6778120 GGCAGGGCAGGACAGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 424765 15 - 608964 GGTAGGGCAGGATGG- i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3902889 16 + 6579706 GGTAgggcgggagggt i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e mm10.chr16 65440988 58 - 98207768 I e canFam3.chr33 29076383 0 + 31377067 C e aotNan1.NW_018492867v1 2554 36 + 21398 I a score=160783.000000 s hg38.chr3_KI270779v1_alt 134850 15 + 205312 GTTGGTGGCAAGAGC s panTro5.chr3 200128340 15 + 202621043 gttggtggcaagagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100063 15 + 190779 gttggtggcaagagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42374 15 - 55620 gttggtggcaagagc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889408 15 + 123690457 GTTGGTGGCAAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472385 15 + 204787373 GTTGGTGGCAAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80049 15 + 192460366 GTTGGTGGCAAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555378 15 + 19675229 GTTGGTGGCAAGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495268 15 + 16847902 GTTGGTGGCAATAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428227 15 - 91754291 gttggtggcaagagc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601245 15 - 1977891 GTTGGTGGCAAGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464483 15 + 7796314 GTTGGTGGCAAGAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945845 13 - 74750902 GTTGCTG--AAGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469886 15 + 17725628 GTTACTGGCAAGAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434409 15 - 6778120 GTTGCTGGCAAGAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2590 15 + 21398 GTTGCTGGCAAGAGC i aotNan1.NW_018492867v1 I 36 C 0 s otoGar3.GL873829 424780 14 - 608964 GCTCATGCCAAG-GC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3902905 14 + 6579706 -ctcatggcaagaac i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e mm10.chr16 65440988 58 - 98207768 I e canFam3.chr33 29076383 0 + 31377067 C a score=279954.000000 s hg38.chr3_KI270779v1_alt 134865 29 + 205312 ATGGCTTTGGAAT---------------------CCAGCATGGCCCTTCT s panTro5.chr3 200128355 29 + 202621043 atggctttggaat---------------------ccagcaTGGCCCTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100078 29 + 190779 atggctttggaat---------------------ccagcaTGGCCCTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42389 29 - 55620 atggctttggaat---------------------ccagcaTGGCCCTTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889423 29 + 123690457 ATGGCTTTGGAAT---------------------CCAACGTGGCCCTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472400 28 + 204787373 ATGGCTTTGGAAT---------------------CCAGCACGGCCC-TCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80064 28 + 192460366 ATGGCTTTGGAAT---------------------CCAGCACGGCCC-TCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555393 28 + 19675229 ATGGCTTTGGAAT---------------------CCAGCACGGCCC-TCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495283 28 + 16847902 ATGGCTTTGGAAT---------------------CCAGCACGGCCC-TCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428242 28 - 91754291 atggctttggaat---------------------ccagcaCAACCC-TCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601260 28 - 1977891 ATGGCTTTGGAAT---------------------CCAGCACGGCCC-TCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464498 28 + 7796314 ATGGCTTTAGAAT---------------------CCAGCACGGCCC-TCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945858 29 - 74750902 ATGGCTTTGGAAT---------------------GCAGCATGGCCCTTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469901 29 + 17725628 ATGGCCTTGGAAT---------------------CCAGCACGGCCCTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434424 29 - 6778120 GTGGCTTTGGAAT---------------------CCAGCTCAGCCCTTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2605 29 + 21398 ATGGCTTTGGAAT---------------------CCAGCACGGCCCTCCT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 424794 23 - 608964 ATGGTGTTCCAAT---------------------CC------GCCCTGCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29076383 29 + 31377067 ACGGCGCCGGACT---------------------CGGGTCCTGCCCTGCT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3902919 46 + 6579706 atggctttagaaccagatatacctcagtccaaagcctgccctgccc---- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I e mm10.chr16 65440988 58 - 98207768 I a score=176612.000000 s hg38.chr3_KI270779v1_alt 134894 22 + 205312 CAT-GACCTTGGGCAGTGAATAG----- s panTro5.chr3 200128384 22 + 202621043 CAT-GACCTTGGGCAGTGGATAG----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100107 22 + 190779 CAT-GACCTTGGGCAGTGGATAG----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42418 22 - 55620 CAT-GACCTTGGGCAGTGGATAG----- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889452 22 + 123690457 CGT-GACCTTGGGCAGTGGACAG----- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472428 22 + 204787373 CGT-GACCCTGGGCAGTGGACAG----- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80092 22 + 192460366 CGT-GACCCTGGGCAGTGGACAG----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555421 22 + 19675229 CGT-GACCCTGGGCAGTGGACAG----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495311 22 + 16847902 CAT-GACCCTGGGCAGTGGACAG----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428270 22 - 91754291 CGT-GACCCTGGGCAGTGGACAG----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601288 22 - 1977891 CAT-GACCCTGGGCAGTGGACAG----- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464526 22 + 7796314 CAT-GACCCTGGGCAGTGGACAG----- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945887 23 - 74750902 CATTGACCTTGTGCGGTGGACAG----- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469930 23 + 17725628 CATAGCCCTTGCACGGCGGACAG----- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434453 23 - 6778120 CATTGACCTTGCACGGTGGACAG----- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2634 22 + 21398 CATCGA-CTTGCGCGGTGGACAG----- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 424817 21 - 608964 CAG-TGGCCTCCACAGGGAGCT------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441046 22 - 98207768 TAT-GTCCTCGTTGAACGAATGG----- i mm10.chr16 I 58 C 0 s canFam3.chr33 29076413 22 + 31377067 GGT-AACCTCGGGCCGTGGACCG----- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3902965 27 + 6579706 aat-ggccttgggtgattgacctaccca i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I e micMur3.chr1 25911292 161 - 114275543 I a score=490282.000000 s hg38.chr3_KI270779v1_alt 134916 47 + 205312 GGTGCTGTCTCTTTTGCAGGCA--TTGG---GGCCACTGTGCAGCA------------GGGCGC------- s panTro5.chr3 200128406 47 + 202621043 GGTGCTGTCTCTTTTGCAGGCA--TTGG---GGCCACTGTGCAGCA------------GGGCGC------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100129 47 + 190779 GGTGCTGTCTCTTTTGCAGGCA--TTGG---GGCCACTGTGCAGCA------------GGGCGC------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42440 47 - 55620 GGTGCTGTCTCTTTTGCAGGCA--TGGG---GGCCACTGTGCAGCA------------GGGCGC------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889474 47 + 123690457 GGTGCTGTCTCTTTTGCAGGCA--TTGG---GGCCACTGTGCAGCA------------GGGCGT------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472450 47 + 204787373 GGTGCTGTCTCTTTTTCAGGCA--CTGG---GGCCACTGTGCAGCA------------GGGTGC------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80114 47 + 192460366 GGTGCTGTCTCTTTTTCAGGCA--CTGG---GGCCACTGTGCAGCA------------GGGTGC------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555443 47 + 19675229 GGTGCTGTCTCTTTTTCAGGCC--CTGG---GGCCACTGTGCAGCA------------GGGTGC------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495333 47 + 16847902 GGTGCTGTCTCTTCTGCAGGCA--CTGG---GGCCACTGTGCAGCA------------GGGTGC------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428292 45 - 91754291 GGTGCTGTCTCTTT--CAGGCA--CTGG---GGCCACTGTGCAGCA------------GGGCGC------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601310 47 - 1977891 GGTGCTGTCTCTTCTGCAGGCA--CTGG---GGCCACTGTGCAGCA------------GGGTGC------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464548 45 + 7796314 GGTGCTGTCTCTTG--CAGGCA--CTGG---GGCCACTGTGCAGCA------------GGGCGC------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945910 46 - 74750902 GGCGCTGTCTCTTTTGCAGGCA--TTGG---GG-GACTGTGCAGCA------------GAGCAC------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469953 46 + 17725628 GGTGCTGTCTCTTTGGCAGGCA--CTAG---GG-GACTGTGCAGCA------------GAGCAC------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434476 46 - 6778120 GGTGCTGTCTCTTTTGCAGGCA--CTGG---GG-GACAGTGCAGCA------------GAGCAC------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2656 44 + 21398 GGTGC-GTCTCTTTTGCAGGCA--CT-G---GG-GACTGTGCAGCA------------GAGCAC------- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25911453 49 - 114275543 GGTACTGTCTCCCTTGCAGGCATGTTGG---GGCCATCGTGCAGCA------------GGGCAT------- i micMur3.chr1 I 161 I 6 s otoGar3.GL873829 424838 49 - 608964 GGTACTGTCTTTCTTGCAGGCATCTTGG---GGCCACTGTGCAGCA------------GGGCAC------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441068 19 - 98207768 -------------------------TGG---GGTTATTACATAGCA------------C------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29076435 49 + 31377067 GTCACCATCTCCCTCGCACGCTTGCTGG---GGCAGCAAAGCCCCA------------GGGGCC------- i canFam3.chr33 C 0 I 7 s dasNov3.JH569502 3902992 71 + 6579706 gttcctgtCTCCCTGGCAGGCTTGTTGGATTAGGCATAGTACAGCACATGCCTTGATGGGGGGCCTGGCAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426239 215 + 22200726 I a score=363461.000000 s hg38.chr3_KI270779v1_alt 134963 30 + 205312 ATGGTAGGAGCTAAGCAAATTTCCTGTCTT s panTro5.chr3 200128453 30 + 202621043 ATGGTAGGAGCTAAGCAAATTTCCTGTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100176 30 + 190779 ATGGTAGGAGCTAAGCAAATTTCCTGTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42487 30 - 55620 ATTGTAGGAGCTAAGCAAATTTCCTGTCTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889521 27 + 123690457 ATGGTAGGAGCTAAGCAAATT---CGTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472497 30 + 204787373 ATGGTAGGGGATAAGCAGATTTCCTGTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80161 30 + 192460366 ATGGTAGGGGATAAGCAGATTTCCTGTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555490 30 + 19675229 ATGGTAGGGGATAAGCAGATTTCCTGTCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495380 27 + 16847902 ATGGTA---GATAAGCAGATTTCCTGTCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428337 25 - 91754291 ATGGTAGG-----AGCAGATTTCCTGTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601357 30 - 1977891 ATGGTAGGGGATAAGCAGATTTCCTGTCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464593 30 + 7796314 ATGGTAGGAGCTAAGCAGATTTCCTATCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945956 30 - 74750902 ATGGTAGGAGCTAAGCACATTTCCTTTCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 469999 30 + 17725628 ATGGTAGGAGCTAAGCAAATCTCCTTTCTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434522 30 - 6778120 ATGGTAGGAGCTAAGCAAATTTCCTTTCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2700 30 + 21398 CTGGTAGGAGCTAAGCAGATTTCCTTTCCT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25911508 30 - 114275543 ATGGTAGGAGCTAAGCAAACTTCCTTTCTT i micMur3.chr1 I 6 I 179 s proCoq1.NW_012133858v1 7426454 30 + 22200726 ATGGTAGGACCTAAGCAAACTTCCTTTCTT i proCoq1.NW_012133858v1 I 215 C 0 s otoGar3.GL873829 424887 30 - 608964 ATGGCCAGAGCTAAACACACTTCCTTTCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441087 12 - 98207768 ATAGTACAAGCC------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29076491 29 + 31377067 GTGGCTGTGGCTAAG-GGGCTTGCTTTCTT i canFam3.chr33 I 7 I 1 s dasNov3.JH569502 3903063 30 + 6579706 ATGGTAGGGACTAAAGGAACTTCCTTTCTT i dasNov3.JH569502 C 0 C 0 a score=198630.000000 s hg38.chr3_KI270779v1_alt 134993 22 + 205312 -GAGGGTGGAGAGCCAAGTACTG s panTro5.chr3 200128483 22 + 202621043 -GAGGGTGGAGAGCCAAGTACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100206 22 + 190779 -GAGGGTGGAGAGCCAAGTACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42517 22 - 55620 -GAGGGTGGAGAGCCAAGTACTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889548 22 + 123690457 -GAGGGTGGAGAGCCAAGTACTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472527 22 + 204787373 -GAGGGTGGACAGCCAAGTACTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80191 22 + 192460366 -GAGGGTGGACAGCCAAGTACTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555520 22 + 19675229 -GAGGGTGGACAGTCAAGTACTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495407 22 + 16847902 -GAGGGTGGACAGCCAAGTACTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428362 22 - 91754291 -GAGGGTGGACAGCCAAGTACTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601387 22 - 1977891 -GAGGGTGGACAGCCAAGTACTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464623 22 + 7796314 -GAGGGTGGACAGCCAAGTACTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 945986 22 - 74750902 -GAGGGTGGAGAGCCAAGAACCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470029 19 + 17725628 -GAGGGTGGAGAGCCAAGAA--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434552 22 - 6778120 -GAGGGTGCAGAGCCAAGAAACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2730 21 + 21398 -GACGGTGGAGAG-CAAGAACCA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7426484 22 + 22200726 -GAAGAATGGGTGTCAAGTCCCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 424917 22 - 608964 -GAAGGGTGAGTGTCAAGTCCCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29076521 20 + 31377067 -AAGGGTGGCGG--TGGGTCCCC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3903093 16 + 6579706 GAAGGGTGGGGTG--AAG----- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25911538 179 - 114275543 I e mm10.chr16 65441099 0 - 98207768 C a score=787728.000000 s hg38.chr3_KI270779v1_alt 135015 65 + 205312 CTGCTC-TCAACGTGCTGGGAGTGGGGAGGGCACGGCTGACGGTCTGGGAACTGTGGAAACTGCCA s panTro5.chr3 200128505 65 + 202621043 CTGCTC-TCAATGTGCTGGGAGTGGGGAGGGCACGGCTGACGGTCTGGGAACTGTGGAAACTGCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100228 65 + 190779 CTGCTC-TCAATGTGCTGGGAGTGGGGAGGGCACGGCTGACGGTCTGGGAACTATGGAAACTGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42539 65 - 55620 CTGCTC-TCAACGTGATGGGAATGGGGAGGGCACGGCTGACGGTCTGGGAACTGTGGAAACTGCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889570 65 + 123690457 CTGCTC-TCAATGGGCTAGGAGTGGGGAGGGCATGGCTGACAGTCTGGGAACTGTGGAAACTGCCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472549 65 + 204787373 ACACTC-TCAACATAATGGGAGTGTGGAGGGCACGGCTGACAGTCAGGGAACTGTGGAAACTGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80213 65 + 192460366 ACACTC-TCAACATAATGGGAGTGGGGAGGACACGGCTGACAGTCAGGGAACTGTGGAAACTGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555542 65 + 19675229 ACACTC-TCAACATAATGGGAGTGGGGAGGGCATGGCTGACAGTCAGGGAACTGTGGAAACTGCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495429 65 + 16847902 ACACTC-TCAACATAATGGGAGTGGGGAGGGCATGGCTGACAGTCAGGGAACTGTGGAAACTGCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428384 63 - 91754291 ACGCTC-TCAACGTGCTGGGAGTGGGGAGGGCATGGCTGACAGTCAGGGAAC--GGGAAACTGCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601409 63 - 1977891 ACACTC-TCAACATAATGGGAGTGGGGAGGGCATGGCTGACAGTCAGGGAAC--GGGAAACTGCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464645 65 + 7796314 ATGCTC-TCAATGTGCTGGGAGTGGGGAGGGCATGGCTGACAGTCAGGGAACTGTGGAAACTGCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946008 65 - 74750902 CCGCCC-TCAACATGCTGGGAGTGGGGAGGGTGCGGCTGACAGTCCAGGAACTGTGGAAACTGCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470048 54 + 17725628 ------------ATACCGGGAGTGGCGAGGGTGTGGCTGACAGTCCGGGAACTGTGGAAACTGCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434574 60 - 6778120 CCGCTC-TCAACATGCTGGGAGTGGGGAGGGTGCGGCCGACAGTC-----ACTGTGGAAACTGCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2751 65 + 21398 CCGCTCTTCAACGTGCTGGGAGTGGGGA-GGTGCGGCTGACAGTCCGGGAACTGTGGAAACTGCCA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25911717 65 - 114275543 CTGCTC-TCCAAGTGCTGGGAGTGGGGAGGGCATGGCTGATGGTCTGGGGACAATAGAGACTGCCA i micMur3.chr1 I 179 C 0 s proCoq1.NW_012133858v1 7426506 65 + 22200726 CTGCTC-TCCAAGTGCTGGGAGTGGGGAGGGCGTGGCTGATGGTCTGGGGACAATGGAGACTGCCA i proCoq1.NW_012133858v1 C 0 I 221 s otoGar3.GL873829 424939 65 - 608964 CTGCTG-TCCGAGTGCTGGGAGAGAGGAGGGCAGGGCTGGTAATCTGGGGACAATGGAGATTGCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441099 57 - 98207768 -----C-TCAGAGAGCCAGCAGAAGGGAGAACAGAGATGATGGCATGAAGATACGAGAGACTA--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076541 63 + 31377067 CTGCCC-CCAAAGTGC-AGGAGCG-GGAGGGTATGACCGCCAGTCTGGGGACCCTGGAGGCTGCTG i canFam3.chr33 C 0 I 19 s dasNov3.JH569502 3903109 54 + 6579706 -TGCTC-CCAGGGGAAAGGTTGTGGGTAAG----------TGGTCTGTGGACTGTGGGGGCCGCAA i dasNov3.JH569502 C 0 C 0 a score=344585.000000 s hg38.chr3_KI270779v1_alt 135080 28 + 205312 TGGGACGGGGGAGAGAACGGGAGGACAC s panTro5.chr3 200128570 28 + 202621043 TGGGACAGGGGAGAGAACGGGAGGACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100293 28 + 190779 TGGGACAGGGGAGAGAACGGGAGGACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42604 28 - 55620 TGGGACAGGGGAGAGAACGGGAGGACAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889635 28 + 123690457 TGGGACAGGGGAGAGAAGGGGAGGACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472614 28 + 204787373 AGGGACAGGGGAGAGAACGGGAGGACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80278 28 + 192460366 AGGGACAGGGGAGAGAACGGGAGGACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555607 28 + 19675229 AGGGACAGGGGAGAGAACGGGAGGACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495494 28 + 16847902 AGGGACAGGGGAGAGAACGGGAGGACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428447 28 - 91754291 AGGGACAGGGGAGAGAACGGGAGGACAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601472 28 - 1977891 AGGGACAGGGGAGAGAACGGGAGGACAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464710 28 + 7796314 AGGGACAGGGGAGAGAACGGGAGGACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946073 28 - 74750902 TGGGACGGGTGAGAGAACGAGAGGACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470102 28 + 17725628 TGGGACGGGGGAGAGAACGAGAGGACAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434634 28 - 6778120 TGGGACGGGGGAGAGAACGAGAGGACAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2816 28 + 21398 TAGGACGGGGGAGAGAGCGAGAGGACAC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25911782 28 - 114275543 CGGTACAGGGAGGAGGATGGGAGGACAC i micMur3.chr1 C 0 C 0 s otoGar3.GL873829 425004 8 - 608964 TGGTACTG-------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441156 26 - 98207768 --GAGCAGTCCCCAGGGTGGGCAGATGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29076623 26 + 31377067 AGTGGCAGGGGGTGGAA--GGAGGACCC i canFam3.chr33 I 19 I 124 s dasNov3.JH569502 3903163 28 + 6579706 TGGAACAGGGAGGGGGGTGGGAGGACAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426571 221 + 22200726 I a score=65754.000000 s hg38.chr3_KI270779v1_alt 135108 5 + 205312 AGACC--- s panTro5.chr3 200128598 5 + 202621043 AGACC--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100321 5 + 190779 AGACC--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42632 5 - 55620 AGACC--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889663 5 + 123690457 GGACC--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472642 5 + 204787373 AGACC--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80306 5 + 192460366 AGACC--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555635 5 + 19675229 AGACC--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495522 5 + 16847902 AGACC--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428475 5 - 91754291 AGACC--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601500 5 - 1977891 AGACC--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464738 5 + 7796314 AGACC--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946101 5 - 74750902 AGACC--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470130 5 + 17725628 AGACC--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434662 5 - 6778120 AGACC--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2844 5 + 21398 AGACC--- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25911810 5 - 114275543 AGACC--- i micMur3.chr1 C 0 I 350 s mm10.chr16 65441182 5 - 98207768 AAGCC--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076773 5 + 31377067 agatc--- i canFam3.chr33 I 124 C 0 s dasNov3.JH569502 3903191 7 + 6579706 -AACTACT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426571 221 + 22200726 I e otoGar3.GL873829 425012 0 - 608964 C a score=1910077.000000 s hg38.chr3_KI270779v1_alt 135113 163 + 205312 A-------------CGTGA------------CCCC--------ACACCCCTGCGCTCTCCAGCTCCCTTGGAGCGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACGGGGT-CAGCCTAGGCGCTCTCTTCTTGCCTGGAGAAATGGC-CCCACTCTGGCCTGGGG s panTro5.chr3 200128603 163 + 202621043 A-------------CGTGA------------CCCC--------ACACCCCTGCGCTCTCCAGCTCCCTTGGAGCGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGAGACGGGGT-CAGCCTAGGCGCTCTCTTCTTGCCTGGAGAAACGGC-CCCACTCTGGCCTGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100326 163 + 190779 A-------------CGTGA------------CCCC--------ACACCCCTGCGCTCTCCAGCTCCCTTGGAGCGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGAGACGGGGT-CAGCCTAGGCGCTCTCTTCTTGCCTGGAGAAACGGC-CCCACTCTGGCCTGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42637 163 - 55620 A-------------CGTGA------------CCCC--------ACACCCCTGCGCTCTCCAGCTCCCTTGGAGCGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACGGGGT-CAGCCTAGGCGCTCTCTTCTTGCCTGGAGAAATGGC-CCCACTCTGGCCTGGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889668 163 + 123690457 A-------------CGTGA------------CCCC--------ACACCCCTGCGCTCTCCAGCTCCCTTGGAGGGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACGGGGT-CAGCCTAAGCGCTCTCCTCCTGCCTGGAGAGATGGC-CCCAGTCTGGCCTGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472647 162 + 204787373 A-------------CGTGA-------------CCC--------ACGCCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGT-CAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80311 162 + 192460366 A-------------CGTGA-------------CCC--------ACGCCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGT-CAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555640 162 + 19675229 A-------------CGTGA-------------CCC--------AGGCCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGT-CAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495527 162 + 16847902 A-------------CGTGA-------------CCC--------ACACCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGT-CAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428480 162 - 91754291 A-------------CGTGA-------------CCC--------ACACCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACAGGGT-CAGCCTAGGCGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601505 162 - 1977891 A-------------CGTGA-------------CCC--------ACACCCCTGTTCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGCCTACAGGGACAGGGT-CAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464743 163 + 7796314 A-------------CGTGA------------CCCC--------ACACCCCTGTGCTCTCCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTCGCCCC--AAACATCTTGCTCATCTGGGTCTACGGGGACAGGGT-CAGCCTAGGCGCTCTCTTCTTGCCTGGAGAGATGGC-CCCACTCTGGCCTAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946106 164 - 74750902 AC------------CGTGA------------CCCC--------TCGTCCCTGTGTTCTCCAGCTCTGTTGGAGGGTCTCTATGG-GAGCTGACTCTCAGTCTTCCCCC--AAACAGCCTGCTCATCTGGGTCTACAGGGACAGGGT-CAGACTATGTGCTCTCTTCTTGCCTGGAAAGATGAC-TCCACTCTGGCCTGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470135 160 + 17725628 AC------------CGTGA------------CCCC--------CGGTCCCTGTGTTCTCCAG--CTGTTGGAGGGTCTCTGCGG-GAGCTGA--CTCAGTCTTCCCCC--AAACAGCCTGCTCATCTGGGTCGACAGGGATGGGGT-CAGGCTAGGCGCTCTCTTCTTGCCTGGAAAGCTGCC-TCCACTCTGGCCTGGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434667 164 - 6778120 CC------------CGTGA------------CCCC--------ACGCCCCTGTGTTCTCCAGCTCTGTTGGAGGGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AGACAGCCTGCTCATCTGGGTCTACAGGGACGGGGT-CAGACTAGGCGCTCTCTTCTTGCCTGGAAAGATGCC-TCCACTCTGGCCTAGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 2849 163 + 21398 AC------------CGTGA-------------CCC--------ATGTCCCTGTGTCCTCCAGCTCTGTCGGAGGATCTCTGTGG-GAGCTGACTCTCAGTCTACCCTC--AAACGGCCTGCTCATCTGGGTCTACAGGGACGGGGT-CAGACCAGGCGCTCTCTTCTTGCCTGGAAAGATGCC-TCCACTCTGGCCTGGGC i aotNan1.NW_018492867v1 C 0 I 21 s otoGar3.GL873829 425012 149 - 608964 ---------------------------------CC--------ACAA----GCTCTCTCTACCTCC-TCGGAGGGTCTCTGTGG-GAGCTGACTCTGTGTCTTTCCCC--AAACAGCCTGCCAACCTGGGTCTTGAGGGATGAGGT-CAGATTAGGCTCTC-CCGCAAGCTTACAAAGATGTC-CCTGAACTGGGCTGGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441187 166 - 98207768 -------------------------------ACCCTTTTCTATTTACCTCTGTGTACCCTGGCTCCCTTGGAAGGTCTTTATGGTGAGGTGATTCTAAGTCTTTCCCCCAAAACATCCTGTTATCATGGGACCAGAG-GATAACAT-CAAAGTAGGCCCTCTTCCTTGGCCTAGAAAGAT-TC-TCCACTTTGGGCTGAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29076778 185 + 31377067 -atgatctcagtgttgtgagattgagccctggccc--------ccagccccgtgctCTCTGGCTCTTCTGGAAGGTCTCTGTGG-GAGATGACTCCATGTCTCCCCCG--AGACAGCCAGGTAATCTGGGTCCTGAGGCACAGGGT-CAGACTGGG-GCCCCCTCCTTCCCCAGA-ACATGGC-CCCATTCTTGTCTGGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3903198 164 + 6579706 ----------CTGCCACCA-------------CAC--------ACATACCTTTGCTCTCTAGTTCC-TTGGAAAGCC--TGGAG-GAACTGTCTCTAAGTCTTCCCCC--AAACAGCCTGCTAATCTGGGTCTAGAGGGATGGGGTATATACCATGCCCCCTCCCCTTCTGTGGAAGAATGCCTCCCACTCTGGGCTGGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426571 221 + 22200726 I e micMur3.chr1 25911815 350 - 114275543 I a score=210360.000000 s hg38.chr3_KI270779v1_alt 135276 24 + 205312 ATGTGGAGCCAGGTATAGAGATGA s panTro5.chr3 200128766 24 + 202621043 ATGTGGAGCCAGGTAGAGAGATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100489 24 + 190779 ATGTGGAGCCAGGTAGAGAGATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42800 24 - 55620 ATGTGGAGCCAGGTATAGAGATGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889831 24 + 123690457 ATGCGGAGCCAGGTATAGAGATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472809 24 + 204787373 ATGCGGAGCCAGGTACGGAGATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80473 24 + 192460366 ATGCGGAGCCAGGTACGGAGATGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555802 24 + 19675229 ATGCGGAGCCAGGTACGGAGATGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495689 24 + 16847902 ATGCGGAGCCAGGTACGGAGATGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428642 24 - 91754291 ATGTGGAGCCAGGTACGGAGATGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601667 24 - 1977891 ATGCGGAGCCAGGTACGGAGATGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464906 24 + 7796314 ATGCGGAGCCAGGTACAGAGATGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946270 22 - 74750902 CTACGGGGCCAGGT--GGAGATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470295 22 + 17725628 CTACAGGGCCAGGT--GGAGATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434831 22 - 6778120 CTACGGGGCCAGGT--GCAGGTGG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 425161 22 - 608964 CTACAGGGCCACGT--GGAGATGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441353 21 - 98207768 GCACAAGGCCAAAT--GAAGATA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076963 22 + 31377067 CCCTGTGGCCAAGT--GAAGATGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3903362 22 + 6579706 TTATGCGGCCAAGT--GGAGATGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426571 221 + 22200726 I e micMur3.chr1 25911815 350 - 114275543 I e aotNan1.NW_018492867v1 3012 21 + 21398 I a score=297627.000000 s hg38.chr3_KI270779v1_alt 135300 31 + 205312 GGAAAGAGGCTCTCAGCtcatacatccccga- s panTro5.chr3 200128790 31 + 202621043 GGAAAGAGGCTCTCAGCtcatacatccccga- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100513 31 + 190779 GGAAAGAGGCTCTCAGCtcatacatccccga- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42824 31 - 55620 GGAAAGAGGCACTCAGCTCATACATCCCCGA- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889855 31 + 123690457 GGAAAGAGGCACTCAGCtcatacatctccga- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472833 31 + 204787373 GCAAAGAGGCACTCAGCTCACACATCCCCga- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80497 31 + 192460366 GCAAAGAGGCACTCAGCTCACACATCCCCGA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555826 31 + 19675229 GCAAAGAGGCACTCAGCTCACACACCCCCga- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495713 31 + 16847902 GCAAAGAGGCACTCAGCTCACACATCCCCga- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428666 31 - 91754291 GCAAAGAGGCACTCAGCTCACACATCCCCGA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601691 31 - 1977891 GCAAAGAGGCACTCAGCTCACACATCCCCGA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464930 31 + 7796314 GGAAAGAGACACTCAGCTCACACATCCCCGA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946292 31 - 74750902 GGAAAGAGGCACTCAGCTCATTCATCCCCga- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470317 30 + 17725628 GG-AAGAGGCACTCAGCTCCTTCATCCCCAa- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434853 31 - 6778120 GGAAAGAGGCACTCAGCTTATTCATCCCCAA- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3033 29 + 21398 GGAAAGA-GCACTCAGCTCA-TCATCCCCGA- i aotNan1.NW_018492867v1 I 21 C 0 s otoGar3.GL873829 425183 18 - 608964 GACAAGAGGCACTCAGCT-------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441374 25 - 98207768 --GAAGACACATTCTGTCCTAA----TCTGA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076985 30 + 31377067 GGCAAGAGGCACTCAA-TCATAAGTCCCTAG- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3903384 32 + 6579706 GGCAAAAGGACCTATAGTCATAAATTCCAAGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426571 221 + 22200726 I e micMur3.chr1 25911815 350 - 114275543 I a score=1563303.000000 s hg38.chr3_KI270779v1_alt 135331 118 + 205312 atgtccgctggtggggatgttggaagcttcctaacgttacccgatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACGAGAGGCTTCATGC-TGAGGGTCCC s panTro5.chr3 200128821 118 + 202621043 atgtccgctggtggggatgttggaagcttcctaacgttacccgatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAGGGTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100544 118 + 190779 atgtccgctggtggggatgttggaagcttcctaacgttacccgatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAGGGTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42855 118 - 55620 ATGTCCGCTGGTGGGGATGGTGGAAGCTTCCTAACGTTACCCGATCAGGAAGTGGAGACCCAGAGAGGGGAAGGGTCTGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAGGGTCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120889886 118 + 123690457 atgtctgctggtggggatgttggaagcttcctaatgttaccagatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAGGGTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472864 118 + 204787373 atgtccgctggtggggatgttggaagcttcctaatgttaccagatcaggaaatggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCACGC-TGAGGGTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80528 118 + 192460366 ATGTCCGCTGGTGGGGATGTTGGAagcttcctaatgttaccagatcaggaaatggaggcccagagaggggaagGGTCTGGGAA-GGAATGAGGACAAGAGGCTTCACGC-TGAGGGTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555857 118 + 19675229 atgtccgctggtggggatgttggaagcttcctaatgttaccagatcaggaaatggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAGGGTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495744 118 + 16847902 atgtccgctggtggggatgttggaagcttcctaatgctaccagatcaggaaatggagacccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAAGGTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428697 118 - 91754291 ATGTCCGCTGGTGGGGATGTTGGAagcttcctaatgttaccagatcaggaaatggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGGGGGTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601722 118 - 1977891 ATGTCTGCTGGTGGGGATGTTGGAagcttcctaatgttaccagatcaggaaatggaggcccagagaggggaagGGTCTAGGAA-GGAATGAGGACAAGAGGCTTCATGC-TGAGGGTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 464961 118 + 7796314 ATGTCCGCTGGTGGGGATGTTGGAagcttcctaatgttaccagatcaggaaatggaggcccagagaggggaagGGTCTGGGAA-GGAATGAGGACAAGAGGCTGCATGC-TGAGGTTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946323 117 - 74750902 atgtcagctggtgaggatgttggaagcttcctaactttacaagatcaggaaatggaggcccagat-ggggaagggtctGGGAAGGGAATGAGGAC-AGAGGCTTCATCC-TGAGGATCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470347 115 + 17725628 atgttagctggtggggatgttggaatcttcctcactttacaagatcaggaaatggaggcccagat-ggggaagggcctGGGAA-GGAATGAGGAC-AGAGGCTTCACCC-TGAGGGT-CC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 434884 116 - 6778120 GTGTCAGCTGGTGGGGATGTTGGAAGCTTCCTAACTTTACAAGATCAGGAAATGGAGGCCCCGAT-GGGGAAGGGTCTGTGAA-GGAATGAGGAC-AGAGGCTTCATCC-TGGGGGTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3062 113 + 21398 TATTCAGCTGGTGGGGATGCTGGAAGCTTCCTAACTTTATAAGATCAGGAAATGGAGGCCCAGAT--GGGAAGGGTCTGGGAA-GGATTGAGGAC-AGAGGCTTCATCC-TGAGGT--CC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7426792 115 + 22200726 atgtcagctggtggggatgttggaagctgtttaac--cacaagatcaggaaattgaggcccagagaggggaggAG-CTGGGAA-GGAGTGGGGACAAGAGGCTTCATTC-TGAGGGCCCC i proCoq1.NW_012133858v1 I 221 I 84 s otoGar3.GL873829 425201 103 - 608964 ---------GCAAGGGATGTTGGAAGGTTCCTAAT--TATAAGATCAAGAAATTAAAGCCCAGAGAGAGGAAGAG-CTGGGAA-GGA--GGGGAC-AGAAGCTTCACTC-TGAGGGTCCC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65441399 111 - 98207768 ----GAGACTACAAGGAAGATGGCAGGTTCTGAACTTTTCAAGATCAGGGGACTGGGACC---AGAGAGAAAGCATCTGGGAA-GCATTGGGATCAAGAGGCTTCATCC-GGAAGGTCCC i mm10.chr16 C 0 I 1 s canFam3.chr33 29077016 118 + 31377067 ATGGCAGCTGGAAGGGCTGCTGGAAGCTTCCCAGTGTTACAACATGAGGAAATCAGTGGCCAGAGAGGGTAAGGGGCTGGGAG-GGAAGGGGGGCGAAAGGCTTCTTTC-TTCAGATCCC i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3903416 104 + 6579706 ATGTCAAC------------TGGAagcttcctaactttac-agactgggaaactgaggcccagagaaggacaggact--GGAA-AGAATGGGGACAGGAAGCTTCATTCTTGAGGGTCCC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25911815 350 - 114275543 I a score=354770.000000 s hg38.chr3_KI270779v1_alt 135449 37 + 205312 --------------------------CTACTTGGCC---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGAT---CACGGACT s panTro5.chr3 200128939 37 + 202621043 --------------------------CTACTTGGCT---------------------------------------------GGGAA--------GG---T-GGGATT---GAGAT---CACGGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100662 37 + 190779 --------------------------CTACTTGGCT---------------------------------------------GGGAA--------GG---T-GGGATT---GAGAT---CACGGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 42973 37 - 55620 --------------------------CCACTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGAT---CACGGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890004 40 + 123690457 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCACGCACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202472982 40 + 204787373 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCATGGACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80646 40 + 192460366 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCATGGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 555975 40 + 19675229 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCATGGACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495862 40 + 16847902 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCATGGACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428815 40 - 91754291 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCATGGACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601840 40 - 1977891 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGATCTCCATGGACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465079 39 + 7796314 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T--GGGTT---GAGATCTCCACGGACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946440 33 - 74750902 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGCT---GAGA-------GGACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470462 40 + 17725628 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---GAGAGCTGTGTGGACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435000 40 - 6778120 --------------------------CTGCTTGGCT---------------------------------------------GGGAA--------GG---T-GGGGTT---CAGAGCTGCATGGACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3175 39 + 21398 --------------------------CTGCTTGGCT----------------------------------------------GGAA--------GG---T-GGGGTT---GAGAGCTGCATGGACT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 425305 44 - 608964 --------------------------TGGCTTGGCT---------------------------------------------AAGAA--------GAACCT-GTGGTTCTCCACAGGTGCATGCA-- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65441511 48 - 98207768 --------------------------TAGCCTGTCT---------------------------------------------GAGAAGAGCCGCGGG---C-GGGGTT---AAGGTCTCCAGGAAGA i mm10.chr16 I 1 C 0 s canFam3.chr33 29077135 86 + 31377067 --------------------------CTACTTGGCTCGGAGGCCCAGGCCTGGTCTCTGACAGAGAAGGGTAGAGACTCCAGAGAA--------GG---TGGGGGGT---GAGATGTCCGTGAACA i canFam3.chr33 I 1 I 2 s dasNov3.JH569502 3903520 66 + 6579706 AATGCTTAGCATGGAACCCCGGGCTGGTCTTTGACT---------------------------------------------GCAAA--------AG---T-AGGGTT---GAGGTCTCTGTGAACA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426907 84 + 22200726 I e micMur3.chr1 25911815 350 - 114275543 I a score=437798.000000 s hg38.chr3_KI270779v1_alt 135486 32 + 205312 CACGCACCCAACTGCCAAGGACGCTGCACGTG s panTro5.chr3 200128976 32 + 202621043 CACGCACCCAACTGCCAAGGACGCTGCACGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100699 32 + 190779 CACGCACCCAACTGCCAAGGACGCTGCACGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43010 32 - 55620 CACGCACCCAACTGCCAAGGACGCTGCACATG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890044 32 + 123690457 CACGCACCCAACTGCCAAGGACGCTGCACGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473022 32 + 204787373 CACGCACCGAACTGCCAGGGACGCTGCACGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80686 32 + 192460366 CACGCACCGAACTGCCAGGGACGCTGCACGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556015 32 + 19675229 CACGCACCGAACTGCCAGGGACGCTGCATGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495902 32 + 16847902 CACGCACCGAACTGCCAGGGACGCTGCACGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428855 32 - 91754291 CACGCACCGAACTGCCAGGGATGCTGCACATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601880 32 - 1977891 CACGCACCGAACTGCCAGGGACGCTGCACGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465118 32 + 7796314 CACGCACCGAACTGCCAGGGACGCTGCACGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946473 31 - 74750902 CAC-CACCAAACTGCCGAGGACTCTGCACGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470502 31 + 17725628 CAC-CACCGAACTGCTGAGGACTCTGCACATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435040 31 - 6778120 CAC-CACCGAACTGCCGAGGACTCTGCACGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3214 31 + 21398 CAC-CACCGAACTGCTGAGGACTCTGCACGTG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25912165 32 - 114275543 CACGTACCAAACTGCCAAGGGCTCTGCACTCT i micMur3.chr1 I 350 C 0 s otoGar3.GL873829 425349 32 - 608964 CACATACCAAACTGCCAGGGACTCTGCATTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441559 32 - 98207768 TACTTACCAAACTGCCAAGGACTGTGCATTCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29077223 32 + 31377067 CACGTACCAAACTGCCAAGGATCGTGCACCCT i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3903586 32 + 6579706 TACGTACCAAACTGCCAAATACTCTGCACTCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7426907 84 + 22200726 I a score=1537734.000000 s hg38.chr3_KI270779v1_alt 135518 79 + 205312 CCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAAGAGGTGAAGCTGCACAGCTGC s panTro5.chr3 200129008 79 + 202621043 CCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCACAGCTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100731 79 + 190779 CCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCACAGCTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43042 79 - 55620 CCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCACAGCTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890076 79 + 123690457 CCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGATGTGAAGCTGCACAGCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473054 79 + 204787373 CCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80718 79 + 192460366 CCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556047 79 + 19675229 CCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 495934 79 + 16847902 CCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428887 79 - 91754291 CCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601912 79 - 1977891 CCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465150 79 + 7796314 CCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCACAGCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946504 79 - 74750902 CCAGCCTTCACGAAGCTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCAGAGCTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470533 79 + 17725628 CCAGCCTTCAAGAAGCTCTCCCCAGGGCCCGTAGCTACAGCACACGCCCCCTCGCCAGGAGGTGAAGCTGCAGAGCTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435071 79 - 6778120 CCAGCCTTCACGAAGCTCTCCCCAGGGCCCATAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCCGCAGAGCTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3245 79 + 21398 CCAGCCGTCACGAAGCTCTCCCCAGGGCCCGTAGCTGCAGCACGCGCCTCCTCTCCAGGAGGTGAAGCTGCAGAGCTGC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25912197 79 - 114275543 CCAGCCTTCTCGAAGCTCTCCCCAGAGCCCGTAGCTGCAGCACACGCCTCCCTGCCAGGAGGAGAAGCGGCACAGCTGC i micMur3.chr1 C 0 I 39 s proCoq1.NW_012133858v1 7426991 79 + 22200726 CCAGCCTTCACGAAGCTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCCTGCCAGGAGGAGAAGCGGCACAGCTGC i proCoq1.NW_012133858v1 I 84 C 0 s otoGar3.GL873829 425381 79 - 608964 CCAGCCTTCACGAAACTCTCCCCAACGCCCGTAGCTGCAGCACACGCCTCCCCGCCAGGAGGAGAAGCTGCACAGCTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441591 79 - 98207768 CCAGCCTTCTCGAAACTCTCCCCAGGCACCATAGCTGCAGCACACACCCCCTCGCCCGGAGGAGAAGCTGCACAGCTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29077255 79 + 31377067 CCAGCCTTGGAGAAGCTCGCCCCAGGGCCCGTAGCTGCAGCACACGCCCCCGCGCCAGGAGGAGAAGCTGCACAGCTGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3903618 79 + 6579706 CCAGCCTTCACGAAGCTCTCCCCAGGGCCCATAGCTGCAGCACACGTTCCCTTGCCAGGAGGAGAAGCTGCACAGCTGC i dasNov3.JH569502 C 0 C 0 a score=498111.000000 s hg38.chr3_KI270779v1_alt 135597 41 + 205312 CTACTGCCGAGGCCCCAGCGACCTGAAACAAGTCCAGTCCC s panTro5.chr3 200129087 41 + 202621043 CTGCTGCCGAGGCCCCAGCGACCTGAAACAAGTCCAGTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100810 41 + 190779 CTGCTGCCGAGGCCCCAGCGACCTGAAACAAGTCCAGTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43121 41 - 55620 CTGCTGCCGAGGCCCCAGCGACCTGAAACAAGTCCAGTCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890155 41 + 123690457 CTGCTGCCGAGGCTCCGGCGTCCTGAAACAAGCCCAGTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473133 41 + 204787373 CTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80797 41 + 192460366 CTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556126 41 + 19675229 CTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496013 41 + 16847902 CTGCTGCCTAGGCCCAAGAGACCTGAAACAAGTGCAGTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 428966 41 - 91754291 CTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 601991 41 - 1977891 CTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465229 41 + 7796314 CTGCTGCCGAGGCCCCAGAGACCTGAAACAAGTCCAGTCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946583 41 - 74750902 CTGCTGCCGGGGGCCCACCGACCTGAAACAAGTCCAGTCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470612 41 + 17725628 CTGCTGCCGGGGGCCCACCGACCTGAAACAAGTCCAGCCGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435150 41 - 6778120 CTGCTGCCGGGGGCCCCCCGACCTGAAACAAGTCCACCTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3324 41 + 21398 CTGCTGCCGGGGGCCCGCCGACCTGAAACCAGTCCAGTCGC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7427070 41 + 22200726 CTGCCGCTCCAGTCCCACCTGTCTGCAACACGTGTAGACAT i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 425460 41 - 608964 CTGCTACTCCAGCCCCACCAGCCTGCAAAACACCCAGACAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441670 32 - 98207768 CTGT---------CCCACCAACCTGCAAAGAGACCAGACAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29077334 41 + 31377067 CTGCTGCCGAGGCCCCACCAGCCTGCAACGGGTACAGACAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3903697 41 + 6579706 CTACTGCTGAGGCCCCACCAGCCTGCAACAAGTCCAGAAAC i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25912276 39 - 114275543 I a score=900506.000000 s hg38.chr3_KI270779v1_alt 135638 76 + 205312 ACTCAGGCCCAGG---CT-GGGGCTGCCA-GGGGCGGGGT-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCG s panTro5.chr3 200129128 76 + 202621043 ACTCAGGCCCAGG---CT-GGGGCTGCCA-GGGGCGGGGT-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100851 76 + 190779 ACTCAGGCCCAGG---CT-GGGGCTGCCA-GGGGCGGGGT-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43162 76 - 55620 ACTCAGGCCCAGG---CC-AGGGCTGCCA-GGGGCGGGCT-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890196 76 + 123690457 ACTCAGGCCCAGG---CC-GGGGCTGCCA-GGAGCGGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473174 99 + 204787373 GCTCAGGCCCAGG---CC-GGGGATGCCA-GGGGCGGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGAAGAGGGCGCGAGCAGAGAGGGCGGGAGGCT--------------GAG-----------------------GGCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80838 99 + 192460366 ACTCAGGCCCAGG---CC-GGGGATGCCA-GGGGCGGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGAAGAGGGCGCGAGCAGAGAGGGCGGGAGGCT--------------GAG-----------------------GGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556167 99 + 19675229 ACTCAGGCCCAGG---CC-GGGGATGCCA-GGGGCAGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGAAGAGGGCGCGAGCAGAGAGGGCGGGAGGCT--------------GAG-----------------------GGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496054 99 + 16847902 ACTCAGGCCCAGG---CC-GGGGATGCCA-GGGGCAGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGAAGAGGGCGCGAGCAGAGAGGGCGGGAGGCT--------------GAG-----------------------GGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429007 84 - 91754291 ACTCAGGCCCAGG---CC-GGGGATGCCA-GGGGCAGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGAAGAGGGCGCGAGCAGAGAGGGC---------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602032 99 - 1977891 ACTCAGGCCCAGG---CT-GGGGCTGCCA-GGGGCGGGGC-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGAAGAGGGCGCGAGCAGAGAGGGCGGGAGGCT--------------GAG-----------------------GGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465270 76 + 7796314 ACTCAGGCTCAGG---CC-GGGGCTGCCA-GGGGCGGGGT-------GGGAACA-AGCA-------------------------------------------------GGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946624 77 - 74750902 GCTCAGGCCCAGG---CT-GGGGCTGCCA-GGGGTGGGCC-------GGGAACA-AGCA------------------------------------------------GGGGGTTG-----TTTCT------GGGAAGAGG-----------------------CT--------------GAG-----------------------GGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470653 77 + 17725628 GCTCAGCCCCAGG---CC-GGGGCTGCCG-GGGGTGGGCC-------GGGAACA-GGCA------------------------------------------------GGGGGCTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435191 77 - 6778120 ACTCAGGCCCAGG---CC-GCGGCTGCCG-GGGGTGGGCT-------GGGAACA-AGCG------------------------------------------------GGGGGTTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3365 77 + 21398 GCTCAGGTCGAGG---CT-GGGGCTGCCG-GGGCTGGGCC-------GGGAACA-AGCA------------------------------------------------GGGGGTTG-----TTTCT------GGGGAGAGG-----------------------CT--------------GAG-----------------------GGTG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25912315 77 - 114275543 ACTCAGGCCCAGG---CT-GGTGGTGCCT-GGGTGAGGGT-------GGGAGCAGGGCA-------------------------------------------------GGGGGTG-----ATTCT------GGGGAGGGG-----------------------CT--------------GAG-----------------------GGCG i micMur3.chr1 I 39 I 29 s proCoq1.NW_012133858v1 7427111 79 + 22200726 ACTCAGGCCCAGG---CTGGGGGGTGCCTGGGGTGAGGGT-------GGGAACAGGGCA-------------------------------------------------GGGGGTG-----ATTCT------GGGGAGGGG-----------------------CT--------------GAG-----------------------GGCA i proCoq1.NW_012133858v1 C 0 I 23 s otoGar3.GL873829 425501 67 - 608964 ACTCAGGTCCAGA---CT------------GGGCGAGGGT-------GGGAACAGGGCA-------------------------------------------------GGGGACG-----ATTCT------GGGGAGGGG-----------------------CT--------------GAG-----------------------AGCA i otoGar3.GL873829 C 0 I 18 s mm10.chr16 65441702 142 - 98207768 CCTCAGGTCCAG-------GAGCTTGTGA-CAGGTGAGGC-------GGGAGGG-GCtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgGTGCTG-----TCTCTCTGTGGGGGGAGGGG-----------------------CTCAGCGTGTCTGGGAGAG-----------------------GGCA i mm10.chr16 C 0 I 9 s canFam3.chr33 29077375 74 + 31377067 GCTCAGGCCCAGAGGCCC-GGGAGCG----GGGGAGGGAC-------GGGA----GGCT-------------------------------------------------GGGGGGG-----ACCCT-----GGGGGAGGGG-----------------------CC--------------GAG-----------------------GGTG i canFam3.chr33 C 0 I 23 s dasNov3.JH569502 3903738 111 + 6579706 ACTCAGGCCCAGA---CT-GGGGATGCCT-CTGGTGGGGTAGGAACAGGGAACA-AGCA-------------------------------------------------GGGTATGGGGGATTCCT------GGGAAGAAG-----------------------CT--------------GAGACACCCTTAGAAAGGACAGGTCAGGCA i dasNov3.JH569502 C 0 C 0 a score=81982.000000 s hg38.chr3_KI270779v1_alt 135714 6 + 205312 TGAGCA s panTro5.chr3 200129204 6 + 202621043 TGAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100927 6 + 190779 TGAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43238 6 - 55620 TGAGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890272 6 + 123690457 TGAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473273 6 + 204787373 CGAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80937 6 + 192460366 CGAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556266 6 + 19675229 CGAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496153 6 + 16847902 CGAGCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 602131 6 - 1977891 CGAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465346 6 + 7796314 AGAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946701 6 - 74750902 TGAGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470730 6 + 17725628 TGAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435268 6 - 6778120 TGAGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3442 6 + 21398 TGAGCA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7427213 6 + 22200726 TGAGCA i proCoq1.NW_012133858v1 I 23 C 0 s otoGar3.GL873829 425586 6 - 608964 TGAGCA i otoGar3.GL873829 I 18 C 0 s mm10.chr16 65441853 6 - 98207768 TGAGCA i mm10.chr16 I 9 C 0 s canFam3.chr33 29077472 6 + 31377067 TGACCG i canFam3.chr33 I 23 C 0 s dasNov3.JH569502 3903849 6 + 6579706 TTATCA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25912392 29 - 114275543 I e chlSab2.chr15 429091 0 - 91754291 C a score=4188656.000000 s hg38.chr3_KI270779v1_alt 135720 229 + 205312 GAGAGGGTGGTGGGTGGGCTTGTGGGG--------------------GGC---------------------GGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTTGGAGGCCTG s panTro5.chr3 200129210 228 + 202621043 GAGAGG-TGGTGGGTGGGCTTGTGGGG--------------------GGC---------------------GGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTTGGAGGCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 100933 228 + 190779 GAGAGG-TGGTGGGTGGGCTTGTGGGG--------------------GGC---------------------GGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTTGGAGGCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43244 229 - 55620 GAGAGGGTGGTGGGTGGGCTTGTGGGG--------------------GGC---------------------GGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890278 229 + 123690457 GAGAGGGTGGTGGGTGGGCTTGTGGGG--------------------GGC---------------------GGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCAAGACAGTAGTTGGGCCTTTCTTCCAGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473279 229 + 204787373 GAGAGGGTGGTGGGTGAGCTTGTGGGG--------------------GGC---------------------GGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 80943 229 + 192460366 GAGAGGGTGGTGGGTGAGCTTGTGGGG--------------------GGC---------------------GGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556272 229 + 19675229 GAGAGGGTGGTGGGTGAGCTTGTGGGG--------------------GGC---------------------GGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCTCTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496159 229 + 16847902 GAGAGGGTGGTGGGTGAGCTTGTGGGG--------------------GGC---------------------GGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGATAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429091 221 - 91754291 --------GGTGGGTGAGCTTGTGGGG--------------------GGC---------------------GGGAAGGTGGTGTC--ACCTATGCTGACAGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGcaggagacctg------gttccagccccagctgggccactgaggctggctcttcaaccACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602137 229 - 1977891 GAGAGGGTGGTGGGTGAGCTTGTGGGG--------------------GGC---------------------GGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCACTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465352 229 + 7796314 GAGAGGGCGGTGAGTGAGCTTGTGGGG--------------------GAC---------------------GCGAAGGAGGTGTC--ACCTATGCTGACAGGTTGAAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCGGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTTGAGACGGTAGTTGGGCCTTTCTTCTCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946707 229 - 74750902 GAGAGGATGGTGGGTGGGCTTGTGGGG--------------------GAC---------------------AGGAAGGAAGTGTC--ACCTATGCTGACGGGTCGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAACCCCAGCTGGGCCACTGAGGCTGGCTCCTCAGCCACTGCAGGCACATGAGACGGTAGTTGGGCCTTTCTTCCCTGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470736 229 + 17725628 GAGAGGATGGTGGGTGGGCTTGTGGGG--------------------GAC---------------------GGGAAGAAGGTGTC--ACCTATGCTGACGGGTCGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCGCTGAGGCTGGCTCCGCAACCATTGCAGGCACATGAGACGGTAGTTGGGCCTTTCTTCCCTGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435274 229 - 6778120 GAGAGGATGGTGGGTGGGCTTGTGGGG--------------------GAC---------------------GGGAAGGAGGCGTC--ACCTAAGCTGACAGGTCGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCCGCTGAGGCTGGCTCCTCAACCACTGCAGGCACACGAGGCGGTAGTTGGGCCTCTCTTCCCTGTGCAGCCTGTAGAACTGCAGCCCTCGGAGGCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3448 226 + 21398 GAGAGGAT-GTGGGGTGGCTTGC-GGG--------------------GAC---------------------GGGAAGGAGGTGTC--ACCTATGCTGACGCGTCGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTG------GTTCCAGCCCCAGCTGGGCTGCTGAGGCTGGCTCCTCAACCACTGCAGGCACATGAGACGGTAGTTGGGCCTTTCTTCCCTGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCT- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25912421 229 - 114275543 GAGAGGATGGTGGGTGGGCTTGTGGGG--------------------GAC---------------------AGGAAGGAGGTGTC--ACCTATGCTGATGGGCTGGAATCGTAAGTCCCAAAGTCCCTGCTGCCAGGAGCAAGGGCAGGAGATCTG------GTTCCTGCCCCACCTGGGCCGCTGAGGTGAGCTCTTCAACCACTGCAGGCACATGAGACGGTAGTTGGGCCTTTGCTCCCTGTGTAGCCGGTAGATTTGCAGCCCCCGGAGGCCTG i micMur3.chr1 I 29 C 0 s proCoq1.NW_012133858v1 7427219 229 + 22200726 GAGAGGATGGTGGGAGGGCTTGTGGGG--------------------GAC---------------------AGGAAGGAGGTGTC--ACCTATGCTGACGGGCTGGAATCGTAAGTCCCATAGTCCCTGCTGCCAGGAGCAAGGGCAGGAGATCTG------GTTCCTGCCCCTCCTGGGCCACTGAGGTGAGCTCTTCAACCACTGCAGGCACTTGAGACGGTAGTTGGGCCTTTCCTCCCTGTGTAGCCTGTAGACCTGCAGCCCCTGGAGGCCTG i proCoq1.NW_012133858v1 C 0 I 1561 s otoGar3.GL873829 425592 229 - 608964 GAGAGGATGGTGAGGAGGCTTGTGGGG--------------------GAC---------------------GGGGAGGATGCGTC--ACCTATGCTGCTGGGCTGGAATCGCAAGTCCCATCGTCCCTGCTGCCAGGAGCAAGGGCAGAAGATCTG------GCTTCTGCCCCATGTGGGCCACTGAGGTGGGCTCTTCAACCACTGCAGGCACTTGAGGCGGTAGTTGGGCCTTTCCTCCCTGTGTAGCTTGTAGACCTGCAGCCCCCGGAGGCCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65441859 229 - 98207768 GAGGTGATGGCCGGTGGGCTTGTCAAG--------------------GGC---------------------AGGAAGGAAGTATC--ACCTGGGTTGATGGGCCTGAACCGAAAGTCCCGTTGTCCCTGCTGCCAGGAGCAAGGGCAGGAAACTGA------GCTCCAGCCCCAGCTGGGCTGCTGAGGCTGACTCTCCAGCCACTGCAGACATTTGAGCCGGTAGTTGGGCCGCTCCTCCCTGTGCAGCCTGTAGACCTGCAGTCCCCGGATGCCTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29077478 250 + 31377067 -GAGGGTTGGTGGGTGGGCTTACGGGGGCGGTGGGCATGCCCCAAGAGGC---------------------AGGGAGGAGCTCTCTTACCTATGCTGCTAGGCTGGAACCGCAAGTCCCACAGTCCCTGCTGCCAGGAGCAAGGGCAGGAGACCTG------GTTCCAGCCCCACGTGGGCCACTGAGGCTGTGTCTTCAACCACTGCAGGCACCTGAGACGGTAGTTGGGCCTTTCTTCCTGGTGCAGGCTGTAGAGCTGCAGGCCCCGGAGGCCTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3903855 255 + 6579706 GAGGGGAT-GTGCATGGGCTTTTGGGG--------------------AGTAGTAGAGATACCCCAAGACAAAGGAATAAGGTGTC--ACCTATACTGATGGGCTGGAATCTCAAGTCCCATCGTCCCTGCTGCCAGGAGCAAGGGCAGGAGATCTGCCTCCAGTCCCAGCCCCAGCCGGTCCACTGAGGCTGCCTCTCCAACCACTGCAGGCACTTGAGACGGTAGTTGGGCCTTTCTTCTCTATGTAGAGTATAGACCTGCAGCCCCCGGAAGCCTG i dasNov3.JH569502 C 0 C 0 a score=41094.000000 s hg38.chr3_KI270779v1_alt 135949 9 + 205312 AGGTC-GGGG--- s panTro5.chr3 200129438 9 + 202621043 AGGTC-GGGG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101161 9 + 190779 AGGTC-GGGG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43473 9 - 55620 AGGTC-GGGG--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890507 9 + 123690457 AGGTC-GGGG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473508 10 + 204787373 GGGTCAGGAG--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81172 10 + 192460366 GGGTCAGGAG--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556501 10 + 19675229 GGGTCAGGAG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496388 10 + 16847902 GGGTCAGGAG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429312 10 - 91754291 GGGTCAGGAG--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602366 10 - 1977891 GGGTCAGGAG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465581 10 + 7796314 GGGTGCGGAG--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 946936 10 - 74750902 GGGTTGGGGG--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 470965 10 + 17725628 GGGTTGGGGG--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435503 10 - 6778120 GGGTTGGGGG--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3674 10 + 21398 GGGTCGGGGG--- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25912650 9 - 114275543 GGGGC-GGGG--- i micMur3.chr1 C 0 I 1594 s otoGar3.GL873829 425821 4 - 608964 ------GAGG--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65442088 4 - 98207768 -----AGGA---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29077728 4 + 31377067 ------GCGG--- i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3904110 6 + 6579706 -------GGGTAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I a score=223477.000000 s hg38.chr3_KI270779v1_alt 135958 27 + 205312 A-TGG---GGGGGAAAGGGCTTAT-CCAGGGC- s panTro5.chr3 200129447 27 + 202621043 A-TGG---GGGGGAAAGGGCTTAT-CCAGGGC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101170 27 + 190779 A-TGG---CGGGGAAAGGGCTTAT-CCAGGGC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43482 28 - 55620 ATTGG---AGGGGAGAGGGCTTAT-CCAGGGC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890516 29 + 123690457 A-TGGG-AGGGGGGAAGGGCTTAT-CCAGGGC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473518 30 + 204787373 A-TGGGGAGAGAGAAAGGGCTTAT-CCAGGGC- i rheMac8.chr2 C 0 I 34 s macFas5.chr2 81182 30 + 192460366 A-TGGGGAGAGAGAAAGGGCTTAT-CCAGGGC- i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 556511 30 + 19675229 A-TGGGGAGAGAGAAAGGGCTTAT-CCAGGGC- i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 496398 30 + 16847902 A-TGGGGAGAGAGAAAGGGCTTAT-CCAGGGC- i cerAty1.NW_012004056v1 C 0 I 34 s chlSab2.chr15 429322 30 - 91754291 A-TGGGAAGAGAGAAAGGGCTTAT-CCAGGGC- i chlSab2.chr15 C 0 I 34 s manLeu1.NW_012102020v1 602376 30 - 1977891 A-TGGGGAGAGAGAAAGGGCTTAT-CTGGGGC- i manLeu1.NW_012102020v1 C 0 I 34 s colAng1.NW_012118932v1 465591 30 + 7796314 A-TGGGGAGAGAGAAAGGGCTTAT-CCAGGGC- i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 946946 31 - 74750902 A-TGGGGAGGAAAAAAGGGCTTATCCCAGGGC- i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 470975 31 + 17725628 A-TGGGGAGGAAAAAAGGGCTTATCCCAGGGC- i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 435513 31 - 6778120 A-TGGGGAGGAAAAAAGGGTTTCTCCCAGGGC- i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018492867v1 3684 31 + 21398 A-TGGGGAGGAAAAAAGGGCTTATCCCAGGGC- i aotNan1.NW_018492867v1 C 0 I 1 s otoGar3.GL873829 425825 25 - 608964 -------ATAGGGGAAGGAGTTATCCCAGGAC- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65442092 28 - 98207768 ----ACAAGGAAAGCAGTGCTTATGTCAGAAC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29077734 29 + 31377067 -CAGAGGAGGGAGGGA-TGCTGCT-CCAGGGC- i canFam3.chr33 I 2 I 2 s dasNov3.JH569502 3904116 28 + 6579706 -----TGAGAGAAGAAAGGGTTATCAGAGGGCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I a score=44855.000000 s hg38.chr3_KI270779v1_alt 135985 8 + 205312 TGGGGCTG s panTro5.chr3 200129474 8 + 202621043 TGGGGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101197 8 + 190779 TGGGGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43510 8 - 55620 TGGGGCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890545 8 + 123690457 TGGGGCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 81213 6 + 192460366 TGGGCC-- i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 556542 7 + 19675229 TAGGCCT- i macNem1.NW_012014355v1 I 1 C 0 s colAng1.NW_012118932v1 465622 8 + 7796314 TGGGGCTG i colAng1.NW_012118932v1 I 1 I 126 s calJac3.chr17 946978 8 - 74750902 TGGGGCTG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 471007 8 + 17725628 TGGGGCTG i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 435545 8 - 6778120 TGGGGCTG i cebCap1.NW_016107444v1 I 1 C 0 s aotNan1.NW_018492867v1 3716 8 + 21398 TGGGGCTG i aotNan1.NW_018492867v1 I 1 C 0 s otoGar3.GL873829 425851 8 - 608964 TTGGGCCA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65442120 8 - 98207768 ACAGGCTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29077765 8 + 31377067 CAGGGCCG i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3904144 8 + 6579706 TGAGGCCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e manLeu1.NW_012102020v1 602406 34 - 1977891 I e chlSab2.chr15 429352 34 - 91754291 I e cerAty1.NW_012004056v1 496428 34 + 16847902 I e rheMac8.chr2 202473548 34 + 204787373 I a score=33907.000000 s hg38.chr3_KI270779v1_alt 135993 7 + 205312 CAGGCCC s panTro5.chr3 200129482 7 + 202621043 CAGGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101205 7 + 190779 CAGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43518 7 - 55620 CAGGCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890553 7 + 123690457 CAGGCCC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 556549 7 + 19675229 GGGGTCC i macNem1.NW_012014355v1 C 0 I 19 s calJac3.chr17 946986 7 - 74750902 GAGGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471015 7 + 17725628 CAGGCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435553 7 - 6778120 CAGGCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3724 7 + 21398 CAGGCCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 425859 4 - 608964 CAGG--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65442128 7 - 98207768 CAAGCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29077773 7 + 31377067 CACGCTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3904152 7 + 6579706 CAGACTC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e colAng1.NW_012118932v1 465630 126 + 7796314 I e manLeu1.NW_012102020v1 602406 34 - 1977891 I e chlSab2.chr15 429352 34 - 91754291 I e cerAty1.NW_012004056v1 496428 34 + 16847902 I e macFas5.chr2 81219 0 + 192460366 C e rheMac8.chr2 202473548 34 + 204787373 I a score=77381.000000 s hg38.chr3_KI270779v1_alt 136000 18 + 205312 TGTCTCAGCTTTAGGGTC s panTro5.chr3 200129489 18 + 202621043 TGTCTCAGCTTTAGGGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101212 18 + 190779 TGTCTCAGCTTTAGGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43525 18 - 55620 TGTCTCAGCTTTAGGGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890560 18 + 123690457 TGTCCTAGCTTTAGGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 81219 7 + 192460366 -----------TGGGGTC i macFas5.chr2 C 0 I 20 s calJac3.chr17 946993 18 - 74750902 TGTCTTAGCTTTAGGGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471022 18 + 17725628 TGTCTTAGCTTTAGGGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435560 18 - 6778120 TGTCTTAGCTTTAGGGTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3731 18 + 21398 TGTCTTAGCTTTAGGGTC i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65442135 18 - 98207768 AGTTCCAGCTTCAGACTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29077780 12 + 31377067 ------TGCATTAGCGAC i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3904159 18 + 6579706 GGTTTTAGCTTTAGGGAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e otoGar3.GL873829 425863 0 - 608964 C e macNem1.NW_012014355v1 556556 19 + 19675229 I e colAng1.NW_012118932v1 465630 126 + 7796314 I e manLeu1.NW_012102020v1 602406 34 - 1977891 I e chlSab2.chr15 429352 34 - 91754291 I e cerAty1.NW_012004056v1 496428 34 + 16847902 I e rheMac8.chr2 202473548 34 + 204787373 I a score=169609.000000 s hg38.chr3_KI270779v1_alt 136018 47 + 205312 AACCAAAACTCACAAATGCACCCCCTCCTGCCACTTCTCACCTCTTT--------------------- s panTro5.chr3 200129507 47 + 202621043 AACCAAAACTCACAAATGCACCCCCTCCTGCCACTTCTCACCTCTTT--------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101230 47 + 190779 AACCAAAACTCACAAATGCACCCCCTCCTGCCACTTCTCACCTCTTT--------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43543 47 - 55620 AACCAAAACTCACAAATGCACCCCCTCATGCCACTTCTCACCTCTTT--------------------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890578 47 + 123690457 AACCAAAACTCACAAATGCACCCCCTTATGCCGCTTCTCACCTCTTT--------------------- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 947011 45 - 74750902 AACGAAAACTCACAAATGCACCCCC--GTGCCACTTCTCACCTCTTT--------------------- i calJac3.chr17 C 0 I 18 s saiBol1.JH378146 471040 46 + 17725628 AACCAAAACTCACGAATGCACCCCC-TGTGCCACTTCTCACCTCTTT--------------------- i saiBol1.JH378146 C 0 I 18 s cebCap1.NW_016107444v1 435578 45 - 6778120 AACCAAAACTCACGAATGCACCCCC--GTGCCACTTCTCACCTCGTT--------------------- i cebCap1.NW_016107444v1 C 0 I 18 s aotNan1.NW_018492867v1 3749 46 + 21398 AACCCAAACTCACAAATGCACCCCC-CGTGCCACTTCTCACCTCTTT--------------------- i aotNan1.NW_018492867v1 C 0 I 17 s otoGar3.GL873829 425863 39 - 608964 --------GTCATAAATGCGGCCCCCCATACCATTCCCTCCCTCTCT--------------------- i otoGar3.GL873829 C 0 I 17 s mm10.chr16 65442153 45 - 98207768 AACGCAAACTCCTGGCTGCATCCTC-CAT-CCATGTCCTGCCTCTCT--------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29077795 44 + 31377067 GACCGA--CTCACAGATGCACCTTCTGCTACCGCCTCT-GCCTCTCG--------------------- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3904177 66 + 6579706 AACCCAAACTCAGAAGTGCAACCCC-GGTGCC-CCACTCTCCTCTCTGGACGGTTTCCAGGGCTGGTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e macNem1.NW_012014355v1 556556 19 + 19675229 I e colAng1.NW_012118932v1 465630 126 + 7796314 I e manLeu1.NW_012102020v1 602406 34 - 1977891 I e chlSab2.chr15 429352 34 - 91754291 I e cerAty1.NW_012004056v1 496428 34 + 16847902 I e macFas5.chr2 81226 20 + 192460366 I e rheMac8.chr2 202473548 34 + 204787373 I a score=36528.000000 s hg38.chr3_KI270779v1_alt 136065 3 + 205312 GGA s panTro5.chr3 200129554 3 + 202621043 GGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101277 3 + 190779 GGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43590 3 - 55620 GGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890625 3 + 123690457 GGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473582 3 + 204787373 GGG i rheMac8.chr2 I 34 C 0 s macFas5.chr2 81246 3 + 192460366 GGG i macFas5.chr2 I 20 C 0 s macNem1.NW_012014355v1 556575 3 + 19675229 GGG i macNem1.NW_012014355v1 I 19 C 0 s cerAty1.NW_012004056v1 496462 3 + 16847902 GGG i cerAty1.NW_012004056v1 I 34 C 0 s chlSab2.chr15 429386 3 - 91754291 GGG i chlSab2.chr15 I 34 C 0 s manLeu1.NW_012102020v1 602440 3 - 1977891 GGG i manLeu1.NW_012102020v1 I 34 C 0 s calJac3.chr17 947074 3 - 74750902 GGA i calJac3.chr17 I 18 C 0 s saiBol1.JH378146 471104 3 + 17725628 GGA i saiBol1.JH378146 I 18 C 0 s cebCap1.NW_016107444v1 435641 3 - 6778120 GGA i cebCap1.NW_016107444v1 I 18 C 0 s aotNan1.NW_018492867v1 3812 3 + 21398 GGA i aotNan1.NW_018492867v1 I 17 C 0 s otoGar3.GL873829 425919 3 - 608964 GGA i otoGar3.GL873829 I 17 C 0 s mm10.chr16 65442198 3 - 98207768 GGA i mm10.chr16 C 0 I 20 s canFam3.chr33 29077839 3 + 31377067 GGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3904243 3 + 6579706 TGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e colAng1.NW_012118932v1 465630 126 + 7796314 I a score=16511.000000 s hg38.chr3_KI270779v1_alt 136068 1 + 205312 C s panTro5.chr3 200129557 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101280 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43593 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890628 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473585 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81249 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556578 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496465 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429389 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602443 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465756 1 + 7796314 C i colAng1.NW_012118932v1 I 126 C 0 s calJac3.chr17 947077 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471107 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435644 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3815 1 + 21398 C i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 425922 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65442221 1 - 98207768 T i mm10.chr16 I 20 C 0 s canFam3.chr33 29077842 1 + 31377067 C i canFam3.chr33 C 0 I 864 s dasNov3.JH569502 3904246 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I a score=353610.000000 s hg38.chr3_KI270779v1_alt 136069 34 + 205312 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG- s panTro5.chr3 200129558 34 + 202621043 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101281 34 + 190779 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43594 34 - 55620 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890629 34 + 123690457 CCAAGTCAGATGGGCAATAATTCCTCCCCCAAAG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473586 34 + 204787373 CCACGTCAGGTGGGCAAGGATTCCTCCCCCAAAG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81250 34 + 192460366 CCACGTCAGGTGGGCAAGGATTCCTCCCCCAAAG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556579 34 + 19675229 CCACGTCAGGTGGGCAAGGATTCCTCCCCCAAAG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496466 34 + 16847902 CCACGTCAGGTGGGCAAGGATTCCACCCCCAAAG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429390 34 - 91754291 CCACGTCAGGTGGGCAAGGATTCCTCCCCCGAAG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602444 34 - 1977891 CCACGTCAGGTGGGCAAGGATTCCACCCCCAAAG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465757 34 + 7796314 CCAAGTCAGGTGGGCAAGGATTCTTCCCCCAAAG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947078 34 - 74750902 CCAATTCAGACGGGCAACGATTCCTCCCCCAGTG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471108 32 + 17725628 CCAATTCAGATGGGCAACGATTCCT--CCCAACG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435645 33 - 6778120 CCAATTCAGACGGGCAATGATTCCT-CCCCAACG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3816 34 + 21398 CCAATTCAGATGGGCAACGAATCCTCCCCCAATG- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 425923 34 - 608964 CCAATTCAGATTGACAATGATTCCTCCTCAAAAG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65442222 33 - 98207768 CCACTTCAGAATGGCAGTGATTTCT-CTCCAAAC- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3904247 34 + 6579706 CCAATACAGATTGGCAGTGACTCCT-CTCAGAAGC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e canFam3.chr33 29077843 864 + 31377067 I a score=52934.000000 s hg38.chr3_KI270779v1_alt 136103 3 + 205312 CCC s panTro5.chr3 200129592 3 + 202621043 CCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101315 3 + 190779 CCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43628 3 - 55620 CCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890663 3 + 123690457 CCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473620 3 + 204787373 CCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81284 3 + 192460366 CCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556613 3 + 19675229 CCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496500 3 + 16847902 CCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429424 3 - 91754291 CCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602478 3 - 1977891 CCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465791 3 + 7796314 CCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947112 3 - 74750902 CCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471140 3 + 17725628 CCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435678 3 - 6778120 CCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3850 3 + 21398 CCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 425957 3 - 608964 CCC i otoGar3.GL873829 C 0 I 1048 s mm10.chr16 65442255 3 - 98207768 CAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29078707 3 + 31377067 ccc i canFam3.chr33 I 864 C 0 s dasNov3.JH569502 3904281 3 + 6579706 CCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I a score=18080.000000 s hg38.chr3_KI270779v1_alt 136106 4 + 205312 CTCG s panTro5.chr3 200129595 4 + 202621043 CTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101318 4 + 190779 CTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43631 4 - 55620 CTTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890666 4 + 123690457 CTCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473623 4 + 204787373 ATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81287 4 + 192460366 ATTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556616 4 + 19675229 ATTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496503 4 + 16847902 ATTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429427 4 - 91754291 ATTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602481 4 - 1977891 ATTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465794 4 + 7796314 ATTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947115 4 - 74750902 ATCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471143 4 + 17725628 ACCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435681 4 - 6778120 ACCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3853 4 + 21398 ATCA i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65442258 4 - 98207768 CTTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29078710 4 + 31377067 atga i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3904284 4 + 6579706 TTTG i dasNov3.JH569502 C 0 I 1142 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e otoGar3.GL873829 425960 1048 - 608964 I a score=13073.000000 s hg38.chr3_KI270779v1_alt 136110 1 + 205312 C s panTro5.chr3 200129599 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101322 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43635 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890670 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473627 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81291 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556620 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496507 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429431 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602485 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465798 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947119 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471147 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435685 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3857 1 + 21398 C i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65442262 1 - 98207768 C i mm10.chr16 C 0 I 779 s canFam3.chr33 29078714 1 + 31377067 t i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e otoGar3.GL873829 425960 1048 - 608964 I e dasNov3.JH569502 3904288 1142 + 6579706 I a score=2852809.000000 s hg38.chr3_KI270779v1_alt 136111 271 + 205312 TTGACTTAGCGTCTGCTTCTGACGACCAAACGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcaacctat-cacattttggaaactattatttctttcccattgggGCCTC-------TGGAC-------TGAGTCATGGAGAAGGCGCCattgtttgcctcttgacgct--tgtctttctacccgcatgaaagctctttgagagaaaacacagttggtctttttcctt----------tgtttctggctg s panTro5.chr3 200129600 271 + 202621043 TTGACTTAGCGTCTGCTTCTGACGACCAAACGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcaacctat-cacattttggaaactattatttctttcccattggggCCTC-------TGGAC-------TGAGTCATGGAGAAGGCGCCattgtttgcctcttgacgct--tgtctttctacccgcatgaaagctctttgagagaaaacacagttggtctttttcctt----------tgtttctggctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101323 271 + 190779 TTGACTTAGCGTCTGCTTCTGACGACCAAACGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcaacctat-cacattttggaaactattatttctttcccattggggCCTG-------TGGAC-------TGAGTCATGGAGAAGGCGCCattgtttgcctcttgacgct--tgtctttctacccgcatgaaagctctttgagagaaaacacagttggtctttttcctt----------tgtttctggctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43636 271 - 55620 TTGACTTAGCGTCTGCTTCTGATGACCAAACGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcaacctat-cacattttggaaactattatttctttcccactgggGCCTC-------TGGAC-------TGAGTCATGGAGAAGGCGCCATCGTttgcctcttgacgct--tgtctttctacccgcatgaaagctctttgagagaaaacacggttggtctttttcctt----------tgtttctggctg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890671 277 + 123690457 TTGACTTAGCGTCTGCTTCTGATGACCAAACATGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcgtcctat-cacattttggaaactattatttctttcccattgggGCCTC-------TGGCC-------TGAGTCATGGAGAAGGCACCAtcatttgcctcttgacgct--tgtctttctacccacgtgaaagctctttgagagaaaacacagttggtctttttcctt-tgaa---aatgtttctggcca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473628 274 + 204787373 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacatggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccactgggGCCTC-------TGGAC-------TGAGTC--GGAGAAGGCatcatcgtctgcctcttgacact--tgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccgttttaa---aatgtttctggctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81292 274 + 192460366 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacatggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccactgggGCCTC-------TGGAC-------TGAGTC--GGAGAAGGCGtcatcgtctgcctcttgacact--tgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttcctttttaa---aatgtttctggctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556621 274 + 19675229 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacatggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccactgggGCCTC-------TGGAC-------TGAGTC--GGAGAAGGCGtcattgtctgcctcttgacact--tgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccgttttaa---aatgtttctggctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496508 274 + 16847902 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTTGCCACAGAACAAACAGAACTGGATTTATACATCACAATTCACGTGGCTGGTTTCT----AAGGCTAAACTGTCCTTTATCCTAT-CACATTTTGGAAACTATTGTTTCTTTCCCATTGGGGCCTC-------TGGAC-------TGAGTC--GGAGAAGGTGCCATCGTCtgcctcttgacact--tgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccgttttaa---aatgtttctggctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429432 274 - 91754291 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacgtggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccattgggGCCTC-------TGGAC-------TGAGTC--GGAGAAGGCGCCATCGTCtgcctcttgacact--tgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccattttaa---aatgtttctggctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602486 274 - 1977891 TTGACTTAGCGTCTGCTTCT--TTACCAAAAGTGGTtgccacagaacaaacagaactggatttatacttcacaattcacgtggctggtttct----aaggctgaactgtcctttatcctat-cacattttggaaactattgtttctttcccattggggCCTC-------TGGAC-------TGAGTC--GGAGAAGGTGCCatcgtctgcctcttgacact--tgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttctgttttaa---aatgtttctggctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 465799 274 + 7796314 TTGACTTAGCGTCTGCTTCT--TTACCAAAAGTGGTtgccatagaacaaatagaactggatttacacttcacaattcacgtggctggtttct----aaggttaaactgtcctttatcctat-cacattttggaaacaattgtttctttcccattgggGCCTC-------TGGAC-------TGAGTC--GGAGAAGGCGCCGTCGTCTCCCTCTTGACact--tgtctttctacccacatgaaagctctttgagagcaaacatagttgatctttttcctttttaa---aatgtttctggctg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947120 266 - 74750902 -TGATTTAGCACCTGTTTCTGATTACCAGACGTGGTTGCCAGAGAACAAATAGAAGTGGATTTACACTTCGCAACTCACGGGGCTGCTGCC-----AGGGTGAAAATGTCCTTTGTCCTAT-CACATTTTGGAAACTG--ATTTCTTTCCCATTGCGGCCGC-------TGGACGTGACA--GAGTCATGGAGCAGGTGCCATCgtttgcc---------------ccttttacctgcatgaaagctctttgagagcaaacatagttggtctttttccttttaaa---aatgtttctggctg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471148 281 + 17725628 -TGACTTAGTGTCTGTTTCTGATTACCAAA-GTGGTTGCCACGGAACAAATAGAACTGGATTTACACGTCACCATTCACGTGGCTGGTTCCT----AGGGCTAAAATGTCCTTTGTCCTAT-CCCATTTTGAAAACTG--ATTTCTTTCCCATTGTGGCCTC-------TGGACGTGACACTGAGTCATGGAGAAGGCGCCATCCTttgcctcctgacacc--tgtctttttacctgcatgaaagctctttgagagcagacatagttggtctttttccttttaaa---aatgtttctggctg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435686 280 - 6778120 -TGACTTAGCGTCTGTTTCTGATTACCAAACGTGGTTGCCACAG-ATAAATAGAACTGGATTTACACCTCACAATTCATGTGGCTGGTTCCT----AGGGCTAAAATGTCCTTTGTCCCAT-CCCATTTTGGAAACCG--ATTTCTTTCCCACTGCGGCCTC-------TGGACGTGACACTGAGTCATGGAGAAGGCGCCATCGTttgcctcttgacacc--tgtctttttacctgcatgaaagctctttgagagcag-catagttggtctttttccttttaaa---aatgtttctggctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 3858 282 + 21398 -TGACTTAGTGTCTGTTTCTGATTACCAAACGTGGTtggcacagaacaaatagaactggatttacactgcacaattcacgtggctggttcct----agggctaaaatgtactttgtcctat-cacattttggaaactg--atttctttcccATTGCAGCCTC-------TGGACGTGGCACTGAGTCATGGAGAAGGCGCCGTCATTGGCCTCTTGACACc--tgtctttttacctgcgtgaaagctctttgagagcaaacacaattgttctttttccttttaaa---aatgtttctggctg i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427008 272 - 608964 TTGACTTCACTTAAGTTCCTGATTACCAAAAGTTTTTGCCGCAGAGCTAATAGAACTAGCTTTACACTTCACAATTTACATGATTGATCTCT----AATGGCAAAATGTCCTTTGTCCTGT-CATAGTTTGCAAATAA---TTTCTTTCCTTTTCAGGCCCC-------GGGACATGAAGTTGAGTCATGGACAGAA----------TGACTCCTGATACTAAAGtcttttta-ctgagtgaaa-ctcctttagagcaaacattgttggcttttttcctttaact---cactcccctggctg i otoGar3.GL873829 I 1048 C 0 s mm10.chr16 65443042 290 - 98207768 CTGACCCAACTTACGTGCCTGATTGCCAAACTTCTTTGTCCCAGATCAACTAGACCTGGACTCACACTT--GCATCTGCCTGACTGACCTCTTCCGAAGGCTAGCATGCCCTTTTCTCCAT-CACATTTTGGAAGCTGACATTTCTTTCCTGTTGGAACCTCTCTATATTAGAC-------TGAGTCTCAGAGGAAGCCCCACAGTTTGCCTCTGGACACT--AGGGTCTCCACCATAGTGAATGCTTGTTGAGAGCCAACATAGCTGGCCTTCATCCTCTTTCTCtccatttttctgtcag i mm10.chr16 I 779 C 0 s canFam3.chr33 29078715 260 + 31377067 ttgacttagctgctgtttcg------cagaagtgtttgtcgcagaacaaatagcac---gtttatgtttcaccatctgcgtggctgatgtcT----AACGCTAAACCGTCCTTCGTTCTATGCACATTTGGGGAACTGTAATTTCTTTCCTCTTGGGGCTTC-------CGGACAATAGATTGAGTCACGTCCATGG----------GGCCTCCTGATACT--GAAGCACCGGCATTCCTAACAGCTATTTGAGAGCAAACGTAGGCAGTCTGCTCCTTT--------TGTttttctttt-- i canFam3.chr33 C 0 I 187 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e dasNov3.JH569502 3904288 1142 + 6579706 I a score=497141.000000 s hg38.chr3_KI270779v1_alt 136382 45 + 205312 ttagcacggtgtccagcacacggcaggtgcccagtaaatgatgac s panTro5.chr3 200129871 45 + 202621043 ttagcacggtgtccagcacacggcaggtgcccagtaaatgatgac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101594 45 + 190779 ttagcacggtgtccagcacacggcaggtgcccagtaaatgatgac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43907 45 - 55620 ttagcacggtgtccagcacacggcaggtgcccagtaaatgACAAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890948 43 + 123690457 ttagca--gtgtccagcacacggcaggtgcccaataattgatgac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473902 45 + 204787373 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81566 45 + 192460366 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556895 45 + 19675229 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496782 45 + 16847902 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429706 45 - 91754291 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602760 45 - 1977891 ttagcacagtgtccagcacacagcaggcgcccagtaaatgatgat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466073 45 + 7796314 ttagcacactgtccagcatgcagcaggtgcccagtaaatgatgat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947386 45 - 74750902 ttagcatagtgtctaccacacggcaggtgctcaatcaatgatgat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471429 45 + 17725628 ttagcacagtgtctaccacacggcaggtgctcagtaaatgacgat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 435966 45 - 6778120 ttagcacagtgtcgaccacacggcaggtgctcaataaatgatgat i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4140 45 + 21398 ttagcacagtgtctaccacacagcaggtgctcaataaatgatgat i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427280 44 - 608964 ttagcccagtgcccagca-acagcaggtgctgagtgaatgacaac i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65443332 45 - 98207768 ttaacctaccatctggcagatagtaaatgctcaataaatgttgac i mm10.chr16 C 0 I 2 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e dasNov3.JH569502 3904288 1142 + 6579706 I e canFam3.chr33 29078975 187 + 31377067 I a score=477134.000000 s hg38.chr3_KI270779v1_alt 136427 68 + 205312 aatgaacgTGAGACCCCCGGGCCTCTTCTTGGTGGAttctctct-ttttgagatggagtctcactctgt---- s panTro5.chr3 200129916 68 + 202621043 aatgaacgTGAGACCTCCGGGCCTCTTCTTGGTAGAttctctct-ttttgagatggagtctcactctgt---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101639 68 + 190779 aatgaacgTGAGACCTCCAGGCCTCTTCTTGGTAGAttctctct-ttttgagatggagtctcactctgt---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 43952 68 - 55620 AATGAACGTGAGACCTTCGGGCCTCTTCTTGGTAGAttctctct-ttttgagatggagtctcactctgt---- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120890991 68 + 123690457 aatgaatgTGAGACCTCCGGGCCTCTTCCTGGTAGAttctctct-ttctgagacggagtctcactctgt---- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202473947 59 + 204787373 gatgaatgT---------CGGCCTCTCCTTCGTAGAttctctct-ttctgagatggagtctcgctctgt---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81611 59 + 192460366 gatgaatgT---------CGGCCTCTCCTTCGTAGAttctctct-ttctgagatggagtctcgctctgt---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556940 59 + 19675229 gatgaatgT---------CAGCCTCTCCTTCGTAGAttctctct-ttctgagatggagtctcgctctgt---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496827 59 + 16847902 gatgaatgT---------CGGCCTCTCCTTCGTAGAttctctct-ttctgagatggagtctcgctctgt---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429751 59 - 91754291 gatgaatgT---------CGGCCTTTCCTTCGTAGAttctctct-ttctgagatggagtctcgctctgt---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602805 59 - 1977891 gatgaatgT---------CGGCCTCTCCTTCGTGGAttctctct-ttctgagatggagtctcgctctgt---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466118 59 + 7796314 gatgaatgT---------CGGCCTCTCCTTGGTAGAttctctct-ttctgagatggagtctcgctctgt---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947431 64 - 74750902 aatgaatgTCAGACCTC-TGGACT---CTTGGTAGAttctctct-ttttgagatagagtcctgctctgt---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471474 69 + 17725628 aatgaaCCTCAGACCTC-TGGACTCTCCTTGGTAGAt--cttct-ttttgcgatagagtcctgctctgtcacc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436011 70 - 6778120 aatgaatgTCAGACCTC-TGGACTCTTCTCGGTAGAttctctct-ttttgagacagagtcccgctctgtcac- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4185 66 + 21398 aatgaatgTCAGACCTC-TGGACTCTTCTTGGTAGAT--TCTCTACtttgagatagagtctcgctctgt---- i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e otoGar3.GL873829 427324 0 - 608964 C e mm10.chr16 65443377 2 - 98207768 I e dasNov3.JH569502 3904288 1142 + 6579706 I e canFam3.chr33 29078975 187 + 31377067 I a score=689077.000000 s hg38.chr3_KI270779v1_alt 136495 76 + 205312 cacccaggctggagtgcagtggcgcgatctcggctcgctgcaacctccacc-tcccaggttcaaacaattctcctgc s panTro5.chr3 200129984 76 + 202621043 cacccaggctggagagcagtggcgcgatctcggctcgctgcaaactccacc-tcccaggttcaaacaattctcctgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101707 76 + 190779 cacccaggctggagagcagtggcgcgatctcggctcgctgcaaactccacc-tcccaggttcaaacaattctcctgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44020 77 - 55620 cacccaggctggagagcagtggcgcgatctcggctcgctgcaacctccaccttcccaggttcaaacaattctcctgc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891059 76 + 123690457 cacccaggctggagtgcagtggcgtgatctcggctcgctgcaacctccacc-tcccaggttcaaacaattctcctgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474006 76 + 204787373 cacccaggcgggagtgcagtggagcgatctcggctcgctgcaacctccacc-tcccgggttcaaacgattctgctgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81670 76 + 192460366 cacccaggcgggagtgcagtggagcgatctcggctcgctgcaacctccacc-tcccgggttcaaacgattctcctgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 556999 76 + 19675229 cacccaggcgggaatgcagtggagcgatctcggctcgctgcaacctccacc-tcccgggttcaaacgattctcctgc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496886 76 + 16847902 cacccaggcgggagtgcagtggagcgatctcggctcgctgcaacctccacc-tcccgggttcaaacgattctcctgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429810 76 - 91754291 cacccaggcgggagtgcagtggagtgatctcggctcgctgcaacctccacc-ttccgggttcaaacgattctccttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602864 76 - 1977891 cacccaggcgggagtgcagtggagcgatctcggctcgctgcaacctccacc-tcccgggttcaaacgattctcctgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466177 76 + 7796314 cacccaggcgggagtgcagtggagcgatctcggcttgctgcaacctccacc-tcccgggttcaaacgattctcctgc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947495 75 - 74750902 catccaggctggagtgcagtaatgtgatctcggctcactgcaacct-cctc-tcccaggttcaaaagattgtcctgc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471543 76 + 17725628 cacccagcctggagtgcagtaatgagatctcggctcactgcaacctccccc-tcccaggttcaaacgattctcctgc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436081 76 - 6778120 cacccaggctggagtgcagtaatgcgatctctgctcactgcaacctccccc-tcccaggttcaaatgattctcctgc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4251 59 + 21398 cacccaggctggagagcagtaatgtgatctcgg-----------------c-tcccaggttcaaacgattctcctgc i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65443379 32 - 98207768 -----------------agtaa----atgCCAGCCCTTTGCAA---------T---------------GTCTCCTGC i mm10.chr16 I 2 C 0 s canFam3.chr33 29079162 62 + 31377067 cgccctgggtggaaggcag-------------gcgctcagcca-ctgagcc-ccccgggcgccccCATTCCTCCCCT i canFam3.chr33 I 187 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e otoGar3.GL873829 427324 0 - 608964 C e dasNov3.JH569502 3904288 1142 + 6579706 I a score=91073.000000 s hg38.chr3_KI270779v1_alt 136571 10 + 205312 ctcaacctat s panTro5.chr3 200130060 10 + 202621043 ctcagcctct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101783 10 + 190779 ctcagcctct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44097 10 - 55620 ctcagcctct i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891135 10 + 123690457 ctcagcctct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474082 10 + 204787373 ctcagcctct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81746 10 + 192460366 ctcagcctct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557075 10 + 19675229 ctcagcctct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496962 10 + 16847902 ctcagcctct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429886 10 - 91754291 ctcagcgtct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602940 10 - 1977891 ctcagcctct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466253 10 + 7796314 ctcagcctct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947570 10 - 74750902 ctcagcctgc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471619 10 + 17725628 ctcaacttcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436157 10 - 6778120 ctcaacctcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4310 10 + 21398 ctcaacctcc i aotNan1.NW_018492867v1 C 0 C 0 s canFam3.chr33 29079224 6 + 31377067 ----TCCTAC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e otoGar3.GL873829 427324 0 - 608964 C e mm10.chr16 65443411 0 - 98207768 C e dasNov3.JH569502 3904288 1142 + 6579706 I a score=1456594.000000 s hg38.chr3_KI270779v1_alt 136581 169 + 205312 tgagtagctggaattacaggtgtgcaccacaacgtctggctaatttttgtatttttagtagagacagaatttcaccatgttggccaggctggtctcgaactcctgatctcaagtgatccgcccacctcagcctcccaaaatgctgggattacaggtgtgagccatggcg- s panTro5.chr3 200130070 169 + 202621043 tgagtagctggaattacaggtgtgcgccacaacgtctggctaatttttgtatttttagtagagacagaatttcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccatggcg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101793 169 + 190779 tgagtagctggaattacaggtgtgcgccacaacgtctggctaatttttgtatttttagtagagacagaatttcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccgtggcg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44107 168 - 55620 tgagtagctggaattacaggtgtgtgccacaatgtctggctaatttttgtatttttagtagagacagaatttcaccatgttggccaggctggtc-cgcactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccatggtg- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891145 169 + 123690457 tgagtagctggaattacaggtgtgcgccacaacgcccagctaatttttgtatttttactagagacagaatttcaccatgctggccaggctggtctcgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtgagccacggcg- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474092 170 + 204787373 cgagtagctggaattacaggtgtgcgctacaatgcctggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccacccatctcggcctcccaaagtgctgggatcacaggcgtgagccaccgcac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81756 170 + 192460366 cgagtagctggaattacaggtgtgcgctacaatgcctggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatcacaggcgtgagccaccacac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557085 167 + 19675229 cgagtagctggaattacaggtgtgcgctacaatgcctggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccaccca---cggcctcccaaagtgctgggatcacaggcgtgagccaccacac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 496972 169 + 16847902 cgagtagctggaattacaggtgtgcgctacaatgcctggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccacccacctcggccttccaaagtgctgggatcacaggcgtgagccaccgcg- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 429896 169 - 91754291 cgagtagctggaattacaggtgtgcgctacgatgcccggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggcgggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggatcacaggcgtgagccactgcg- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 602950 169 - 1977891 cgagtagctggaattacaggtgtgcgctacgatgcccggctaatttttgtgtttttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggcgatccgcccacctcagcctcccaaagtgcagggatcacaggcgtgagccaccgcg- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466263 169 + 7796314 cgagtagctggaattacaggtgtgcgctacaacgcccggctaatttttgtgtttttagtagagacacagtttcaccatgttggtcaggctggtctcaaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgtgattacaggcgtgagtcacagca- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947580 161 - 74750902 tgagtagctgggattacaggtgtgcaccacaacgcctggctaatttgtgtgtttttagca-------ggtttcaccctgttgcccaggctggtctcgaactcctgacctcaagtgatctg-ccacctcgacctcccaaagtgccgggattacaggcatgaaccatcttg- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471629 168 + 17725628 tgagtagctgggattacaggtgtgcaccacaacacctggctaatttttgtgtttttagtagagacagggtttcaccctgttgcccaggctggtctcgaactcctgacctcaagtgatctg-ccacctcaacctcccaaagtgctgggattacaggcatgagccaccttg- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436167 168 - 6778120 tgagtggctgggattacaattgtgcaccacaacacctggctaatttttgtgtttttagtagagacagggtttcaccctgttgcccaggctggtctcgaactcctgacctcaagtgatctg-ccacctcaacctcccaaagtgctgggattacaggcgtgagccaccttg- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4320 168 + 21398 tgagtaactgggattacaggtgtgcaccacaacgcctggctaatttttgtgtttttagtagagacagggtttcaccctgttgcccaggctggtcctgaactcctgacctcaagtgatctg-ccacctcgacctcccaaagtgctgggattacaggcgtgagccaccttg- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427324 16 - 608964 tgagt-------------------------------------------------------------------------------------------gaaCACCAGAC--------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29079230 92 + 31377067 --------------TCCTGGCTCTCAGCACAGCGTGCAGC--------ACGCAGCAGGTGGAGACGTGCTTCCGTGACGATGACTGCACG----TCAGGCTCCTG-----------------------GACCTCC-----TGTTGG------------------------ i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e mm10.chr16 65443411 0 - 98207768 C e dasNov3.JH569502 3904288 1142 + 6579706 I a score=68399.000000 s hg38.chr3_KI270779v1_alt 136750 9 + 205312 cccagccGG s panTro5.chr3 200130239 9 + 202621043 cccagcTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101962 9 + 190779 cccagccGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44275 9 - 55620 cccagccGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891314 9 + 123690457 cccagccAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474262 9 + 204787373 cccggccGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81926 9 + 192460366 cccggccGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557252 9 + 19675229 cccggccGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497141 9 + 16847902 cccggccGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430065 9 - 91754291 cccggccGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603119 9 - 1977891 cccggccGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466432 9 + 7796314 cccggccGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947741 8 - 74750902 cccAAC-AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 471797 8 + 17725628 cccagc-AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436335 8 - 6778120 cccagc-AG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4488 8 + 21398 cccagc-AG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427340 9 - 608964 CTCTGCGGG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3905430 9 + 6579706 CCTCGTTGG i dasNov3.JH569502 I 1142 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I e mm10.chr16 65443411 0 - 98207768 C e canFam3.chr33 29079322 0 + 31377067 C a score=801995.000000 s hg38.chr3_KI270779v1_alt 136759 67 + 205312 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT s panTro5.chr3 200130248 67 + 202621043 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 101971 67 + 190779 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44284 67 - 55620 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891323 67 + 123690457 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474271 67 + 204787373 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 81935 67 + 192460366 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557261 67 + 19675229 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497150 67 + 16847902 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GAATTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430074 67 - 91754291 TAGATTTTCTTAAAGGAGCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603128 67 - 1977891 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466441 67 + 7796314 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGATACTT-GGA-GAATTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 947749 68 - 74750902 TAGATTTTCTTAAGGGATCTCCCCTGGGTTCTCATTCCAGCTCTGG-ACAGGACACTTGGGA-GTACTGT i calJac3.chr17 C 0 I 240 s saiBol1.JH378146 471805 65 + 17725628 TAGATT---TTAAGGGATCTCCCCTCGGTTCTCATTCCAGCTCTGG-ACAGGACACTTGGGA-GTATTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436343 68 - 6778120 TAGATTTTCTTAAGGGATCTCCCCTGGGTTCTCATTGCAGCTCTGG-ACAGGACACTTGGGA-GTATTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4496 68 + 21398 TAGATTTTCTTAAGGGATCTCCCCTGGGTTCTCATTCCAGCTCTGG-ACAGGACACTTTGGA-GTATTGT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427349 66 - 608964 TA-ATTCCCCTAAGGGATCTCATCTGGGTTCCTTTCCAGCCTTGGG-ACAAGACACCT-ATT-GTATTTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65443411 56 - 98207768 TAGATATCTTTAA-------------GGATCTTACTCCAGCTCTGGAATTGGGTATTT-ATATGTGTTAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29079322 64 + 31377067 TAGGGTCCCTTCTGGGATCTCACCCGGACGCCC--TCCAGCTCCGC-TC-GGCCACCT-GGA-GTAGCGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3905439 68 + 6579706 TTGATTCCCTTGAAGGATCTCATCTGGGTTCCCATCCCAGTCCTGGGACAGGACGCTT-GCA-GTAGTGT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I a score=2976999.000000 s hg38.chr3_KI270779v1_alt 136826 289 + 205312 CTGAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGATCTGGG-CCCCCC-----GAGAGCCCTCTTGGGCT-GGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCT-GGGTGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGAACTGTGTGGGGGAGGCCCTTCAGGATGGCCGTGATGTTAGGGAGGTGC-CCTCTAGGACTGCGATGGT--GTATGGGCTGGAGGACAC-----------------------------------GC s panTro5.chr3 200130315 324 + 202621043 CTGAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGATCTGGG-CCCCCC-----GAGAGCCCCCTTGGGCT-GGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGAACTGTGTGGGGGAGGCCCTTCAGGATGGCCGTGATGTTAGGGAGGTGC-CCTCTAGGACTGCGATGGT--GTATGGGCTGGAGGACACACGAGGACTGTGATGGTGTATGGGCTGGGGGACACGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102038 324 + 190779 CTGAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGATCTGGG-CCCCCC-----GAGAGCCCTCTTGGGCT-GGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGAACTGTGTGGGGGAGGCCCTTCAGGATGGCCGTGATGTTAGGGAGGTGC-CCTCTAGGACTGCGATGGT--GTATGGGCTGGAGGACACGCGAGGACTGTGATGGTGTATGGGCTGGGGGACACGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44351 287 - 55620 CTGAACTGTCCATTCAAA-TCCC-ACCTCCCACGA-GA-CC-----CTGTCCTCAC--TTCCAGGATCTGGG-CCCCCT-----GAGAGCCCTCTTGGGCT-GGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCT--GGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGAACTGTGTGGGGGAGGCCCTTCAGGATGG-TGTGATGTTAGGGAGGTGC-CCTCTAGGACTGCAATGGT--GTATGGGCTGGAGGACAC-----------------------------------AC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891390 287 + 123690457 CTGAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CGGTCCTCAC--TT-CAGGATCTGGG-CCCCCC-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGCAGGAGATGTTAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGAC--TGTGGGGGAGGCCCTTCAGGATGGCAGTGATGTTAGTGAGGTGC-CCTCTAGGACTGCGATGGT--GTATGGGCTGGAGGACAC-----------------------------------AC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474338 290 + 204787373 CTGAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCTGGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGC-CCTCTAGGACTGCGGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82002 290 + 192460366 CTGAACTGCCCATTCAAA-TCTC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCTGGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGC-CCTCTAGGACTGCGGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557328 290 + 19675229 CTGAACTGCCCATTCAAA-TCTC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCTGGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGC-CCTCTAGGACTGCGGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497217 290 + 16847902 CTGAACTGCCCACTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGC-CCTCTAGAACTGCAGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430141 289 - 91754291 CTGAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCTGCGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGGAGAAGACG-TAG-CCCCTCTGAGACGGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCT-GGGCGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGATGGTGGTGACGTTAGGGAGCGGC-CCTCTAGGACTGCGGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603195 290 - 1977891 CTAAACTGCCCATTCAAA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGATCTGGGCCCCCCT-----GACAGCCCTCTTGGGTT-GGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCT-GGGCAGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGC-CCTCTAGGACTGCGGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466508 283 + 7796314 CTGAACTGCCCATTCAAA-TCCT-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCGAGGATCTGGG-CCCCCT-----GAGAGCCCTCTTGGGTT-GGT-TCATCTGAGGG---AGATG-TAGCCCCCTC--AGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCTGCCCCCT-GGGTGGTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCA-GGGAAGCCCTTCAGGACGGTGGTGACATTAGGGAGCCGC-CCTCTAGGACTGCGGTGGT--GTGTGGGCTGGAGGACAC-----------------------------------AC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948057 289 - 74750902 CCATTCTACCCATTTACA-TCCC-ACCTCCCACAA-GG-CC-----CTGTCTTCAC--TTCCAGGAGCTGGACCCCCC------GAGAGCCCTCTTGGGTT-GGT-ACATCCGAGGGAGGAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCAGGGGTGCAGAAGATGCCAGCTGCTCCCT-GGGCAGTGCCATGTCCCACTTAGACCTGTAGGAGGTTGGACTGTGTGGGGGACACCCTTCAAGATGGTGGTGATGCCCGGGAGCTGC-CCTCTAGGACTGTGATGGC--ATATGGGCTGGAGGACAA-----------------------------------AC i calJac3.chr17 I 240 C 0 s saiBol1.JH378146 471870 290 + 17725628 CCATTCTACCCATTTATA-TCCC-ACCTCCCACAA-GA-CC-----CTGCCCTCAC--TTCCAGGAGCTGGGCCCCCCT-----GAGAGCCCCCTTGGGTT-GGT-ACATCCGAGGGAGGAGATG-CAGCCCCCTCTGAGACTGTGCTGCATCCAGGGGTGCAGAAGGTGCCAGCTGCTCCCT-GGGCAGTGCCATGTCCCACTTAGACTTCTAGGAGGTTGGACTGTGTGGGGGATGCCCTTCAAGATGGTGGTGATACCAGGGAGCTGC-CCCCTAGGACTGCGATGGC--ATCTGGGCTGGAGGACAA-----------------------------------AC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436411 283 - 6778120 CCATTCTACCCATTTATA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGAGCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTT-GGT-ACATCCGAGGGAGGAGATG-CAGCCCCCTCCGAGAC--TGCTGTGTCCAGGGGTGCAGAAGGTGCCAGCTACTCCCT-GGGCAGGGCCATGTCGCACTTAGACCTGTAGGAGGTTGGACTGTGTGGGGGATGCCCTTCGAGATGGTGGTGATGCCAGGGAGCTGC-CCCTTAGGACTGCAATGGCATATATGGGCTGGAG------------------------------------------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4564 285 + 21398 CCATTCTACCCATTTATA-TCCC-ACCTCCCACAA-GA-CC-----CTGTCCTCAC--TTCCAGGAGCTGGGCCCCCCT-----GAGAGTCCTCTTGGGTT--GT-ACATCCGAG---GGAGATG-TAGCCCCCTCTGAGACTGTGCTGTGTCCGGGGGTGCAGAAGGTGCCAGCTGCTCCCT--GGCAGTGCCACGTCCCA-TTAGACCTGTAGGAGGTTGGACCGTGTGGGGGATGCCCTTCAAGATAGTGGTGATGCCAGGGAGCTGC-CCTCTA-GACTGCGACGGCACATATGGGCTGAAGGACAA-----------------------------------AC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427415 243 - 608964 CTGGACTGCCCCTTCAGA-CCCCTGCCTCCCACAA-TACCC-----CTGTCCTCAC--TCCCAGGATCTGGGCCCCC-------------------------------------------ACAGG-AAGCCCTCT-TGGGACTGTACTATGTCTCGGTATGTAGCATGTACCTGCTGCTCCCCGGGGCAGGGCCACATCCTGCACAGACCTGCGGGAGGTCCCGCTGTGT--GGGATACCCTGGGGAAGGGTGGAGACTCT-GGGAGCTGC-CCTCTAGGACTGCCATGAC--AT---------AGGAAGC-----------------------------------A- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65443467 260 - 98207768 CCTAACT--CCACACCTA-TCTC-CCTTCCTGCAGTGA-CC-----TTGTCATCCCCACTCCAGGACCAGGGTGCCTACAGATAGACAGACATTCTGGGTT-TGTCTCTTCTACAGAATAAGATT-TA-------TAGGGGCTGAGA-GTATGAAAAGGTCCAGGCAGGATTAACTG-----T-GGA-----------------TGCACCTGTAGGTGGCTGGTTTGTGCA--GGATGCTCTTCGGGGTGATGGAGAGGTTA-----CATC-TGTCTAGGACTGTCATGGC--ATATGGTATAGAGGGCAA-----------------------------------GG i mm10.chr16 C 0 C 0 s canFam3.chr33 29079386 269 + 31377067 CCTAACTGCCCACGCATAGCCCC-ACCTCCTGCGC-GG-CC-----CTGTTGTCAC--CTCCAGGACCCGGC-CTCCCC-----GAGAGCTGGGTTCGGCT-GGT-CCCC-----GGCGGAGACC-TCGCCCCGCCCAAGA---TGCCCCACCCGAGGGCCCAGAAGGT-CCTGGTGTCCCGG-GCGGGGGGGCAGGTCCTGATCATA-----GTGGAGCCGCCCTGTCCGGGGAC--CCCCGTGGGATGGAGGAGACGCC-GGGAGCCGCGGCTCGAGGACCCCCGCGCC--GCATGG--CGGAGGACA-------------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3905507 274 + 6579706 CCTAACTGGCCATTCATATTCCC-ACCTCCTACAA-TA-CCCCTGTCTGTCATCAC--TTTCCGGATCTGGCCCCCCATG----GAGAGACTGTCTGGGTTTGGA-TCATCCCAGAGGGGAGACA-TATCTCCAAATGAGACTGTACTGTGTCTGAGGGTACAGAAGGTAACAGCTGCTCCCT-GGGCAGTGCCAAGATCTGATTGCATCTTTTGGAGGTCATACTATGCTGATGACATCTTTAGGGATGGTAAAGATG-------------CCTC------------GGT--ATCTGGAGTGGAAGAATA-----------------------------------AA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7427448 1561 + 22200726 I e micMur3.chr1 25912659 1594 - 114275543 I a score=2676590.000000 s hg38.chr3_KI270779v1_alt 137115 168 + 205312 GAGGGCTT---GAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGA--CTCTCAGGCCTCT--GCCGT s panTro5.chr3 200130639 168 + 202621043 GAGGGCTT---GAGGCCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGA--CTCTCAGGCCTCT--GCCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102362 168 + 190779 GAGGGCTT---GAGGCCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGA--CTCTCAGGCCTCT--GCCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44638 168 - 55620 GAGGGCTT---GAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCGACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGA--CTCTCAGGCCTCT--GCCAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891677 168 + 123690457 GAGGGCTT---GAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACGCTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGA--CGCTCAGGCCCCT--GCCGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474628 170 + 204787373 GAGGGCTT---GAGGCCAGCTCAGGGGTGATAAGGTGGCACTTCTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-GAACGAGAGACTCTCTCAGGCCTCC--GTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82292 170 + 192460366 GAGGGCTT---GAGGCCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-AAAGCAGAGACTCTCTCAGGCCTCC--GTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557618 170 + 19675229 AAGGGCTT---GAGACCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-GAAGGAGAGACTCTCTCAGGCCTCT--GTTAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497507 170 + 16847902 GAGGGCTT---GAGACCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-GAAGGAGAGACTCTCTCAGGCCTCT--GTCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430430 170 - 91754291 GAGGGCTT---GAGACCAGCGCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-GAAGGAGAGACTCTCTCAGGCCTCT--GTCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603485 170 - 1977891 GAGGGCTT---GAGACCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-GAAGGAGAGACTCTCTCAGGCCTCT--GTCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466791 170 + 7796314 GAGGGCTT---GAGACCAGCTCAGGTGCGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGA-AAAGGAGAGACTCTCTCAGGCCTCC--GCTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948346 169 - 74750902 CAGGGCTT---GAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTAAGTTGGAATTCAGGAGCCTGTCGGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCAAAATAGCCATCTCCGCTGCAGGCAAAGGAAAGA--TGCTCAGGCCTCT--GCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472160 169 + 17725628 GAGGCCTC---GAGACCAGCTCAGGTGTGGTAAGGTGGCACTTTTACCTAAGTTGGAATTCAGGAGCCTGTCAGGGCGATACTTCTCCCACACTGGCTGGAACATCAGTGGGCTATTTTCGAAAGAGCCATCTCCGCTGCAGGCAAAGGAAAGA--CGCTCAGGCCTCT--GCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436694 159 - 6778120 -------------GACCAGCTCAGGTGCGACAAGGTGGCACTTTTACCTAAGTCAGAATTCAGGAGCCTGTCAGGGCGATACTTCTCCCACACTGGCTGGAACATCAGTGGGCTGTTTTCGAAATGGCCATCTCCGCTGCAGGCAACGGAAAGA--TGCTCAGGCCTCT--GCCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 4849 165 + 21398 AAGAGCT----GAGACCAGCTCAGGTGTGATAAGTGGGCACTTTTACCTAAGTTGGAATTCAGGAGCCTGTCAG---CATACTTCTCCCACACTGGCTGGAACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCGCTGCAGGCAAAGGAAAGA--CGCTCAGGCCTCT--GCCAT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25914253 169 - 114275543 GAGGGCCT---GAGACCAGCTCAAGAGTGACAAGGTAGCACTTTTACCTGAGTTGGAATCCAGGAATTGGTCTGGACGATACCTCTCCCACAGTGGCCGGGACATCAGTGGGCTGTTTTTGAAATACCCGTCTCCACTGCAGGCAAAGGGAAGA--CCCTCAGGCCTCT--GCCAC i micMur3.chr1 I 1594 I 116 s proCoq1.NW_012133858v1 7429009 169 + 22200726 GAGGGCCT---GAGACCAGCTCAAGAGTGACAAAGTGACACTTTTACCTGAGTTGGAATCCAGGAATTGGTCTGGACGATACCTCTCCCACAATGGCTGGGACATCAGCGGGCTGTTTTCAAAATACCCGTCTCCACTGCAGGCAAAGGGAAGA--CCCTCAGGCCTCT--GCCAC i proCoq1.NW_012133858v1 I 1561 I 122 s otoGar3.GL873829 427658 161 - 608964 -----------GAGACCAGCTCAAGTGTTACAAGGTGATACTTTTACCTAAGTTGGAATTCAGAAATCGGTCCGGACGATACCTCTCCCACAGTGGCCGGGACATCAGTGGGCTGTTTTCAAAATACCCGTCTCCACTGCAGGCAAAAGGAAGA--CTCTCAGGCCTCT--GCCAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65443727 167 - 98207768 -GAAGCCT---GAAGCCAGCTCGTATGTGGT-GGGTGGCACTTTTACCTAATTTGGAATTCAGGAATCGATCTGGACGGTACTTCTCCATTGCTGGCCGGAATGTCAGCGGGCTGTTTTCAAAATACCCATCTCCACTGCAGGCAAAGGAAAGA----CTCAGGCCTCTGGGTCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29079655 164 + 31377067 GAGGGCATTTAGGGTCCAGC-CAGGTGTGC----GGGGCGCTGTTACCTGTGTGGGTGTTCAGGAGCCGGTCGGGCTGGTACCTCTTCCACGTGGGCCCAGAGGACAGCGCGCTGTGGCCGCAGAGCCCGTCTCCGCTGCGGGCGGGGGAGAAG-----CCAGGCTGTC--GCGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3905781 168 + 6579706 GAGGACTT---GAGACCAGCTCAAATATGAGAAAGTG-CACTTTTACCTGAGTTGGGATTCAGGAATTGGTCTGGACGATACTTCTTCCAATTTGGTTGGGATGTCAGTGGACTATTTTGGGAATACCCATCTCCACTGCAGGGAAGAGAAAGA--ATCTTAGGCCTCT--GTCAT i dasNov3.JH569502 C 0 C 0 a score=1073923.000000 s hg38.chr3_KI270779v1_alt 137283 112 + 205312 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCGGG--------CAGTGGGT--------CAGTGGGTCAGCCAGCCCCCATCG s panTro5.chr3 200130807 112 + 202621043 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCGGG--------CAGTGGGT--------CAGTGGGTCAGCCAGCCCCCATCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102530 112 + 190779 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCGGG--------CAGTGGGT--------CAGTGGGTCAGCCAGCCCCCATCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44806 112 - 55620 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCATCCAT-TCATCCC-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCAGG--------CAGTGGGT--------CAGTGGGTCAGCCAGCCCCCATCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891845 112 + 123690457 GCACAGGCTCTTGCCTCATA-GTTG-CAAGGTGTTCGT-TCATCCC-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCAGG--------CAGTGGGT--------CAGTGGGTCAGCCAGCCCCCATCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474798 112 + 204787373 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTGGC---------CGGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCGGG--------CAGTGGGT--------CAGTGGGTCAGCCAACCCCCATTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82462 112 + 192460366 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTGGC---------CGGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCGGG--------CAGTGGGT--------CAGTGGGTCAGCCAACCCCCATTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557788 120 + 19675229 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTGGC---------CGGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCGGG--------CAGTGGGTCAGTGGGGCAGTGGGTCAGCCAACCCCCATTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497677 120 + 16847902 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTGGC---------CGGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCGGG--------cagtgggtcagtgggtcagtgggtcagCCAACCCCCATTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430600 112 - 91754291 GCACAGGCTTTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTGGC---------CAGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCGGG--------CAGTGGGT--------CAGTGGGTCAGCCAACCCCCATTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603655 120 - 1977891 GCACAGGCTCTTGCCTCGCG-GTTG-CAAGGCGTCCAT-TCATCCC-GCTGGC---------CGGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCGGGcagtgggtcagtgggt--------cagtgggtcagCCAACCCCCATTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 466961 112 + 7796314 GCACAGGCTCTTGCCTCACG-GTTG-CAAGGCGTCCGT-TCATCCC-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAGCCAGCTAGGCAGG--------CAGTGGGT--------CAGTGGGTCAGCCAACCCCCATTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948515 113 - 74750902 GAACAGGCCCTTGCCTCCTG-GTTG-CAAGGCAACCAT-TCACTCCGGCTAGC---------TGGT-----CAG----------------CAGCTG--GCCAACCAGCTAGGCAGT--------CAGTGGGT--------CAGCTGGTCATCCGACCCCCATTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472329 112 + 17725628 ACATAGGCTCCTGCCTCTCG-GTTG-CAAGGCAGCCAT-TCACTCT-GCTAGC---------CAGT-----CAG----------------CAGCTG--GTCAACCGGCTAGGCAGT--------CGGTGGGG--------CAGCTGGTCATCTGACCCCCATCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436853 112 - 6778120 GCACAGGGTCTTGCCTCTCG-GTTG-CAAGGCACCCAT-TCACTCT-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCAGT--------CAGTGGGT--------CAGCTGGTCACCCGACCCCCATCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5014 112 + 21398 GCACAGGCTCTTGCCTCTCG-GTTG-CAAGGCATCCAT-TCACTCT-GCTAGC---------CGGT-----CAG----------------CAGCTG--GTCAACCAGCTAGGCAGT--------CAGTGGGT--------CAGCTGGTCATCCGACCCCCATCG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 427819 66 - 608964 GCACAGGCTC------------------------CCCC-TCCACCC-ACTCAC---------TGA---------------------------------------AAGCTATGAATT--------CATTCATT--------CAGT--------CAGCCTGAATCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65443894 116 - 98207768 ACTCAAGCTCTTCGCTCTCATTTTG-AAAGCTACTCAT-TCGTTGA-GTTTGT---------CAGTCATCCCAG----------------CTCCCG--GTCAG-CAGCT-GGTAGC--------CCATGGCT--------CAGTCAGCTGAGCAGCTCAGATTG i mm10.chr16 C 0 I 3 s canFam3.chr33 29079819 115 + 31377067 ------GGTCCCGCCGTCGG-G--G-CCCAGCGCCTGTGCCACCCC-AGCGGCGGCAGGTGGCGGC-----CTG----------------CACCCGTCGGCGGGCCGCCCTGGGAG--------CAGGGAGc--------cc-tgagccacctgcttcacctct i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3905949 129 + 6579706 ACACAGGGACTTTCTTCTCA-GTTGACTTGTTATtcat-tcattca-gttagt---------cagt-----cagccagtcactcactgtccagcta--gtcagtcagccaCCCCAT--------CAGTTTGT--------TGGCTGGCTACTCAGCCAGAATCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429178 122 + 22200726 I e micMur3.chr1 25914422 116 - 114275543 I a score=39780.000000 s hg38.chr3_KI270779v1_alt 137395 6 + 205312 -TCAAGC s panTro5.chr3 200130919 6 + 202621043 -TCAAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102642 6 + 190779 -TCAAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44918 6 - 55620 -TCGAGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891957 6 + 123690457 -TTGAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474910 6 + 204787373 -TCCAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82574 6 + 192460366 -TCGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557908 6 + 19675229 -TCGAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497797 6 + 16847902 -TCGAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430712 6 - 91754291 -TCGAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603775 6 - 1977891 -TCGAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467073 6 + 7796314 -TCAAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948628 6 - 74750902 -TTGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472441 6 + 17725628 -TTGAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436965 6 - 6778120 -TTGAGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5126 6 + 21398 -TTGAGT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25914538 5 - 114275543 -CTGAA- i micMur3.chr1 I 116 C 0 s otoGar3.GL873829 427885 6 - 608964 -CTGAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444013 6 - 98207768 -CACAGT i mm10.chr16 I 3 C 0 s canFam3.chr33 29079934 6 + 31377067 -tcccgc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3906078 6 + 6579706 CTGGAG- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429178 122 + 22200726 I a score=376911.000000 s hg38.chr3_KI270779v1_alt 137401 25 + 205312 CCCAG------CACTGAGCAGGAGAGGGGAC s panTro5.chr3 200130925 25 + 202621043 CCCAG------CACTGAGCAGGAGAGGGGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102648 25 + 190779 CCCAG------CACTGAGCAGGAGAGGGGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44924 25 - 55620 CCCAG------CACTGAGCAGGAGAGGGGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891963 25 + 123690457 CCCAG------CACTGAGCAGGAGAGGGGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474916 25 + 204787373 CCCAG------CACTGAGCAGCAGAGGGGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82580 25 + 192460366 CCCAG------CACTGAGCAGCAGAGGGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557914 25 + 19675229 CCCAG------CACTGAGCAGCAGAGGGGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497803 25 + 16847902 CCCAG------CACTGAGCAGCAGAGGGGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430718 25 - 91754291 CCCAG------CACTGAGCAGCAGAGGGGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603781 25 - 1977891 CCCAG------CACTGAGCAGCAGAGGGGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467079 25 + 7796314 CCCAG------CAATGAGCAGGAGAGGGGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948634 25 - 74750902 CCCAG------CACTGAGCAGGAGAGGGGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472447 25 + 17725628 CCCAG------CACTGAGCAGGAGAGGAGAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436971 25 - 6778120 CCCGG------CACCGAGCAGGAGAGGGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5132 25 + 21398 CCCAG------CACTGAGCAGGAGAGGGGAT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25914543 25 - 114275543 CCCAA------CACAGAGCAGGAAAGGGGAG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7429300 24 + 22200726 CCCAA------CACCAAGCAGGAGA-GGGAG i proCoq1.NW_012133858v1 I 122 C 0 s otoGar3.GL873829 427891 24 - 608964 CTCAG------GACCCAGCAGGAGA-GGGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444019 25 - 98207768 GCCAG------TCCCAAGGGGGAGAAGGAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29079940 31 + 31377067 ctcagtttccacattgggggaaagaggggac i canFam3.chr33 C 0 I 66 s dasNov3.JH569502 3906084 25 + 6579706 CCCAA------TACTAAGCAAGAAAGAAGAG i dasNov3.JH569502 C 0 C 0 a score=1562778.000000 s hg38.chr3_KI270779v1_alt 137426 147 + 205312 AAGATGGCT-GGGCAGAGGT-AG-GAGGCTCTAACCGATTCCACA--------TCTGATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG s panTro5.chr3 200130950 147 + 202621043 AAGATGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCGATTCCACA--------TCTGATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102673 147 + 190779 AAGATGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCGATTCCACA--------TCTGATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 44949 147 - 55620 AAGATGGAT-GGGCAGAGGT-AG-GAGGCTCTAACTGATTCCACA--------TCTGATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120891988 147 + 123690457 AAGACAGAT-GGGCAGAGGG-AG-GAAGCTCTAACCGATTCCACA--------TCTGATCGCTAGCTGCAAGAAACTGGCAGGTCTGCTTGGTCATGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAAGA--AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202474941 134 + 204787373 AAGACGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCAATTC------------------CGCT-TCTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGAC---GGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82605 134 + 192460366 AAGACGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCAATTC------------------CGCT-TCTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGAC---GGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 557939 136 + 19675229 AAGACGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCAATTC------------------CGCT-TCTGCAAGAAACTGGCAGGTCTGCTTGGTCACGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497828 136 + 16847902 AAGACGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCAATTC------------------CGCT-TCTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430743 134 - 91754291 GAGACAGAT-GGGCAGAGGT-AG-GAGGCTCTAACCAATTC------------------CGCT-TCTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGACA-GGGGCATGAAAACA---AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603806 136 - 1977891 AAGACGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCAATTC------------------CGCT-TCTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACA--AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467104 146 + 7796314 AAGACGGAT-GGGCAGAGGT-AG-GAAGTTCTAACTGATTCCACA--------TCTGATCGCT-TCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACA-GGGGCGTGAAAACAAC-AGAGTTCAGGCCTCATTTCTGTTTGTTACCCTTCAACA--AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948659 141 - 74750902 AAGATGGAT-GGGCAGAGGT-GG-GAGGCTCTAACCGATTCTACA--------TCTGATCACCAGCTGCAAGGAAGTGGCAGGTCAGCTTGGTCATGAGAT---GGGTGTGGAAACAAC-AGAGTTCAGGCCTCCTTTCTGTTTGTTTCCCTT----A--AA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472472 136 + 17725628 AAGAGGGAT-GGGCAGAGTT-GG-GAGGCTCTAACCGATGCCACA--------TCTGATAGCTAGCTGCAAGGAAGTGGCAGGTCAGCTTGGTCATGA--------GTGTGGAAACAGC-AGAGTTCAGGCCTCCGTTCTGCTTGTTTCCCTT----A--AA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 436996 139 - 6778120 ACGATGGAT-GGGCAGAGGT-AG-GAGGCTCTAACCGATTCCACA--------TCTGATCGCCAGCTGCGAGGAAGTGGCAGGTCAGCTTGGTCATGACAT---GGGTGTGGAAACAGC-AGAGGTCAGGCCTCCCT--TGTTTGTTTCCCTT----A--AA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5157 130 + 21398 AAGACGGGT-GGGCAGAGGT-GG-GAGGCTCTAACCGATTCCACA--------TCTGATCGCCAGCTGCAAGGAAGTGGCAGGTCAGCTTGGTCATGAGAT---GGGTGTGGAAACAGC-AGAGT-----------TTCTGTTTGTTTCCCTT----A--AA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25914568 152 - 114275543 CAGATGGCT-GGGCAA-GGT-GG-GAGGCTCTAACTTATCCCACGTCTGATTGTCTGATCACTAACTGCAGGAAACTGGCAAGTCCACCTGGTCATGAGACA-GGGGTGTGAAAACAAC-AGAGTTCAGGCCTCCCTTCTGTTTGTTTCCCTTAAACA---- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7429324 155 + 22200726 GAGATGGCT-GGGCAG-GTC-AG-GAGGCTCTAACTTATCTCGCATCCGATCATCTGATTGCTAACTGCAGGAAACTGGCAGGTCCACCTGGTCATGAGACA-GGAGTGTGAAAACAACAAGAGTTCAGGCCTCCCATTTGTTTGTTTCCCTTAAACCAG-- i proCoq1.NW_012133858v1 C 0 I 30 s otoGar3.GL873829 427915 125 - 608964 GAGGTGGCT-GGATAG-GGT--G-GAAGCTCTAACTTA---------------TCTGGTTGACAACTGGAGAGAAGTGACAGGTCCACTTGGTCATGAGACA-GGGGTGGAAAA------------TAGGACTCCTTTCTGTTTGTTTCCCTTATACC---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444044 130 - 98207768 AGAA--GAT-GGGTGGGGGTGGG-GAGGTTCTGTGTTATCCCACA--------TCTCATCA------GGGAGACATCAGCAGGCTCACTCAGT----ACACACCCGGTGTGGAAGCCAC-AGAGTTGAGGCCAGATTTTCCTTTGTTTCCTCT--------- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906109 142 + 6579706 ---ATGGGTGGGGTAGGGAT-GGAGAGGCTCTAGTTTATTCCATG--------TCTGGATGTTAACTGCAAGAAACTGGCATGTCCACTTCATCATGAGACA---GGAGTGAAAACAAC-AGAGTTCTGGCCTCCTTCTCGTTGGTTTTCCTTAAACT---- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29079971 66 + 31377067 I a score=284903.000000 s hg38.chr3_KI270779v1_alt 137573 27 + 205312 CAGAGGGTTTGGAGCGG----GACAGACTCT s panTro5.chr3 200131097 27 + 202621043 CAGAGGGTTTGGAGCGG----GACAGACTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102820 27 + 190779 CAGAGGGTTTGGAGCGG----GACAGACTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45096 27 - 55620 CAGAGGGTTTGGAGCGG----GACAGACTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892135 27 + 123690457 CAGAGGGTTTGGAGCAG----GACAGACTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475075 27 + 204787373 CAGAGGGTTTGGAGCGG----GACAGACTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82739 27 + 192460366 CAGAGGGTTTGGAGCGG----GACAGACTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558075 27 + 19675229 CAGAGGGTTTGGAGCGG----GACAGACTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497964 27 + 16847902 CAGAGGGTTTGGAGCGG----GACAGACTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430877 27 - 91754291 CAGAGGGTTTGGAGCAG----GACAGACTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603942 27 - 1977891 CAGAGGGTTTGGAGCGG----GACAGACTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467250 27 + 7796314 CAGAGAGTTTGGAGCGG----GACAGACTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948800 27 - 74750902 CAGAGGGATTGGAGAGG----GACAGTCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472608 27 + 17725628 CAGAGAGATTGGAGAGG----GACAGTCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437135 27 - 6778120 CAGAGGGATTGGAGAGG----GACAGTCTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5287 24 + 21398 CAGAGGGATTGGAGAGG------CGGTCTG- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25914720 24 - 114275543 ---AGGGATTGAAGAGG----GACATATTGT i micMur3.chr1 C 0 I 1 s otoGar3.GL873829 428040 24 - 608964 ---AGGGATTGGAGAGG----GACATACTGT i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65444174 23 - 98207768 ----GATGCTATCTAAG----GACATACTAC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906251 31 + 6579706 CAGAGGATTAGAGGGGGTGGAGTTTGGCTCT i dasNov3.JH569502 C 0 I 3 e proCoq1.NW_012133858v1 7429479 30 + 22200726 I e canFam3.chr33 29079971 66 + 31377067 I a score=2826034.000000 s hg38.chr3_KI270779v1_alt 137600 229 + 205312 agggacagtgtattgt-gatggttaagacccagtttctggagttaggcagtgatggattcaactgctgatccccccacttac----tagcttggtgaccacagac-aagttactgaccctctctgattctt-agttttcacatctgtataaaagggatta---cagtggcatctacctcactgtattgtgaggattaaatgcagtaacatctgcaaatccctcag-----aactgagtgaggcc s panTro5.chr3 200131124 229 + 202621043 agggacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgatggattcaactgctgatccccccacttac----tagcttggtgaccacagac-aagttactgaccctctctgattctt-acttttcacatctgtataaaaaggatta---cagtggcacctacctcactgtattgtgaggattaaatgcagtaacatctgcaaatccctcag-----aactgagtgaggcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 102847 229 + 190779 agggacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgatggattcaactgctgatccccccacttac----tagcttggtgaccacagac-aagttactgaccctctctgattctt-agttttcacatctgtataaaaaggatta---cagtggcacctacctcactgtattgtgaggattaaatgcagtaacatctgcaaatccctcag-----aactgagtgaggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45123 229 - 55620 agggacagtgtattgt-gacggttaagagccagtttctggagttaggcagtgatggattcaactgctgatccccccacttac----tagcttggtgaccacagac-aggttactgaccctctctgattctt-agttttcacatctgtataaaagggatta---cagtagcacctacctcactgtattgtgaggattaaatgcagtaacatctgcaaatccctcag-----aactgagtgaggcc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892162 229 + 123690457 agggacagtgtattat-gatggttaagagccagtttctggagttaggcagtgatggattcaactgctgatccccacactttc----tagcttggtgaccatggac-aagttactgaccctctctgattctt-agttttcacatctgtataaaagggatta---cagtagcacctacctcgctgtattgtgaggattaaatgcagtaccatctgcaaatccctcag-----aactcagtgaggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475102 228 + 204787373 AGGGacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttac----tagcttggtgaccacggac-aacttactgaccctctctggttctt-agttttcacatctgtgtaaaagggatta---aagtagca-cgacctagctgtacggtgaggattcaatgcagtaacatctgcgaatccctcag-----aactgagtgaggcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82766 228 + 192460366 AGGGacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttac----tagcttggtgaccacggac-aacttactgaccctctctggttctt-agttttcacatctgtgtaaaagggatta---aagtagca-cgacctagctgtacggtgaggattcaatgcagtaacatctgcgaatccctcag-----aactgagtgaggcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558102 228 + 19675229 AGGGacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttac----tagcttggtgaccacggac-aacttactgaccctctctggttctt-agttttcacatctgtgtaaaagggatta---aagtagca-cgacctagctgtacggtgaggattcaatgcagtaacatctgcgaatccctcag-----aactgagtgaggcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 497991 228 + 16847902 agggacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttac----tagcttggtgaccatggac-aacttactgaccctctctgattctt-agttttcacatctgtgtaaaagggatta---cagtagca-ctacctagctgtacagtgaggattcaatgcagtaacatctgcgaatccctcag-----aactaagtgaggcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 430904 229 - 91754291 AGGGacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttac----tagcttggtgatcacggac-aacttactgaccctctctgattcttaagttttcacatctgtgtaaaagggatta---aagtagca-ctacctagctgtacagtgaggattcaatgcagtaacatctgcgaatccctcag-----aactgagtgaggcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 603969 228 - 1977891 AGGGacagtgtattgt-gatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttac----tagcttggtgaccacggac-aacttactgaccctctctgattctt-agttttcacatctgtgtaaaagggatta---cagtagca-ctacctagctgtacagtgaggattcaatgcagtaacatctgcgaatccctcag-----aactaagtgaggcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467277 229 + 7796314 AGGGacagtgtattgt-gatggttaagagtcagtttctggagttagacagtgacggattcaactgctgatccccacacttac----tagcttggtgaccatggac-aagttactgaccctctctgattctt-agttttcacatctgtgtaaaaaggatta---cagtagcacctacctagctggacagtgaggattcaatgcagtaacatctgcaaatccctcag-----aactgagtgaggcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 948827 196 - 74750902 AGGGACAGTGTATTGT-GAT-GCTAAGAGCCAGTCTCTGGAGTTAGACAGGGATGGATTCAACTG-------------------------CTGATCCCCAC----------actgaccgtctctgagtctt-agttttcacgtc-gtgt-agagggatta---cagtagcacctaccttgcagtattgtggggattaaatgcagtaacacctgcgaatcgctcag-----aactgagtgGGGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472635 208 + 17725628 agggatagtgtattgt-gat-gctaagagccagtctctggagttagacagtgacggattcagcta-----------------------gcctggtgaccacgggc-aagttactgaccctctctgagtctt-agttttcacatctgtgt-aaagggatta---cagtagcacctaccttgcagtattgtgaggattaaatgcagtaacacctgcgagttgctcag-----aactgagtggggcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437162 225 - 6778120 agggacagtgtgctgg-gat-gctaagagc--atctctggagttagacagtgatggattcaactgctgatccccacacttac----tagcctggtggccacgggc-aagtcactgaccctctctgagtctt-agttttcacatctgtat-aaagggatga---cagtagcacgcaccttgcagtattatgaggattaaatgcagtaacacctgcgaatcgctcag-----aactgagtggggcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5311 224 + 21398 -AGGacagtgtatcgtggag-gctaagagccggtctctggagttagacagtgacggattcaactg-ccgatcccacacttac----ta--cctgtgaccacgtgcaaaattactgaccctctctgagt-tt-agttttcacatctgtgt-aaagggatta---cagtagcacctaccttgcagtattgtgaggattaaatgcagtaacacctgcgaaccgctcag-----aaccgagtggggcc i aotNan1.NW_018492867v1 C 0 I 65 s micMur3.chr1 25914745 227 - 114275543 GGGGacagtatattgt-gatggttaagagctggtctctggagttaggcagtcacgtgttcagctgctgatgccagcacttac----tagcttggtgcccatggga-aagttacgtaacctctctgattcttaagttttcacatctacgtaaaaggg---a---cagcagcatctacctcacaacaccgtgaggattaaatgcagtgatatttgcaaatccctcag-----aattgagtgaagcc i micMur3.chr1 I 1 C 0 s proCoq1.NW_012133858v1 7429509 218 + 22200726 GGGGacaatatattgt-gatggttaagagctggtctctggagttaggcagtcatgggttcagctg------------cttac----tagcttggtgaccgtggga-aagttacttaacctctctgattcttaagttttcacatctacgtaaaagggacta---cagcagcatctacctcacaacattgtgaggattaaatgcagtgatatttgtaaatccctcag-----aattgagtgaagcc i proCoq1.NW_012133858v1 I 30 C 0 s otoGar3.GL873829 428065 234 - 608964 GGAGACA-TGCACTGT-GATGGTTaagaggtggtctctggagttaggcagtcatgggttcagctgctgatcccagcacttatataatagcttggtgaccatagga-aagttacttaacctctcagatgctt-agttttca-gtctgagtaaaagga-tta---tgggagcatccacctcacagcattgtgagggttaaacacgg-gatatctgtaaatccctgggcaTCAAACTGAGCGAAGCC i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65444197 177 - 98207768 -AGGA------------GGTGCTTCCAGGTCAgtttc-ggggtcaggcagtcact--ttcagcccttgattct-gcacttac----taac--ggtgatc-tggtc------------------tgactttgggGGTTTTATATCTGAGTGAAAGAGCCTT---CCGTCGTC-----------------TAAGGCTTCAATGCAGTGACATTTGTAAATCTCTCAC-----ATCTGAGTGGAGAC i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906285 208 + 6579706 GAGAacagtacatttt-gatagctaagggctagtctttggagttagccagtcatggattcaactcctgattccagcactcac----tagcatgg----------c-aagtttcttagcctgtctggctcct-ggttttcatatctgtgtaaaagagattatggtagtggcatctaccttgtagtat--tgaggagtaaatgTA------------AATGCCTCAG-----AACTGAGTGAGGAC i dasNov3.JH569502 I 3 C 0 e canFam3.chr33 29079971 66 + 31377067 I a score=12907.000000 s hg38.chr3_KI270779v1_alt 137829 1 + 205312 t s panTro5.chr3 200131353 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103076 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45352 1 - 55620 t i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892391 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475330 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82994 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558330 1 + 19675229 t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498219 1 + 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431133 1 - 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604197 1 - 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467506 1 + 7796314 t i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949023 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472843 1 + 17725628 t i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437387 1 - 6778120 t i cebCap1.NW_016107444v1 C 0 I 53 s micMur3.chr1 25914972 1 - 114275543 t i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7429727 1 + 22200726 t i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 428299 1 - 608964 T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444374 1 - 98207768 C i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906493 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I a score=120716.000000 s hg38.chr3_KI270779v1_alt 137830 11 + 205312 tgatacaacag s panTro5.chr3 200131354 11 + 202621043 tgatacaacag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103077 11 + 190779 tgatacaacag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45353 11 - 55620 tgatacaacag i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892392 11 + 123690457 tgatacaacag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475331 11 + 204787373 cgatacaacag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 82995 11 + 192460366 cgatacaacag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558331 11 + 19675229 cgatacaacag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498220 11 + 16847902 cgatacaacag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431134 11 - 91754291 cgatacaacag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604198 11 - 1977891 cgatacaacag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467507 11 + 7796314 tgatacaacag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949024 11 - 74750902 CAATACAACAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472844 11 + 17725628 caatacaacag i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25914973 11 - 114275543 tgttataacag i micMur3.chr1 C 0 I 195 s proCoq1.NW_012133858v1 7429728 11 + 22200726 tgttacaacag i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 428300 11 - 608964 GGATACAATGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444375 9 - 98207768 --ACATTGAAG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906494 11 + 6579706 CAGTACAATGG i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I a score=59131.000000 s hg38.chr3_KI270779v1_alt 137841 6 + 205312 atgctG s panTro5.chr3 200131365 6 + 202621043 atgctG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103088 6 + 190779 atgctG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45364 6 - 55620 atgctG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892403 6 + 123690457 atgctG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475342 6 + 204787373 gtgctG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 83006 6 + 192460366 gtgctG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558342 6 + 19675229 gtgctG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498231 6 + 16847902 gtgctG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431145 6 - 91754291 gtgctG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604209 6 - 1977891 gtgctG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467518 6 + 7796314 gtgctG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949035 6 - 74750902 CTGCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472855 6 + 17725628 gtgctG i saiBol1.JH378146 C 0 C 0 s proCoq1.NW_012133858v1 7429739 6 + 22200726 gcgctG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 428311 6 - 608964 GTGCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444384 6 - 98207768 GGCCTA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906505 6 + 6579706 GAGCGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25914984 195 - 114275543 I e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I a score=13600.000000 s hg38.chr3_KI270779v1_alt 137847 1 + 205312 C s panTro5.chr3 200131371 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103094 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45370 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892409 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475348 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 83012 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558348 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498237 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431151 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604215 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467524 1 + 7796314 c i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949041 1 - 74750902 C i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 7429745 1 + 22200726 c i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 428317 1 - 608964 C i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65444390 1 - 98207768 C i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906511 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25914984 195 - 114275543 I e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C a score=98733.000000 s hg38.chr3_KI270779v1_alt 137848 14 + 205312 ---CACTGCTGCTacca s panTro5.chr3 200131372 14 + 202621043 ---CACTGCTGccacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103095 14 + 190779 ---CACTGCTGccacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45371 14 - 55620 ---CACTGCTGccacca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892410 14 + 123690457 ---CACTGCTGccacca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475349 14 + 204787373 ---CACTGCTGTCACCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 83013 14 + 192460366 ---CACTGCTGTcacca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558349 14 + 19675229 ---CACTGCTGTcaaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498238 14 + 16847902 ---CACTGCTGCCACCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431152 14 - 91754291 ---CACTGCTGTcacca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604216 14 - 1977891 ---CACTGCTGTGacca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467525 14 + 7796314 ---cactgccaccgcca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949042 14 - 74750902 ---CACCACCACCAGCA i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 7429746 14 + 22200726 ---caccgccaccacca i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65444391 14 - 98207768 ---CACCTCCACTGTCA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906512 14 + 6579706 CATCACCCCTGCCA--- i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C a score=10500.000000 s hg38.chr3_KI270779v1_alt 137862 1 + 205312 c s panTro5.chr3 200131386 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103109 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45385 1 - 55620 c i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892424 1 + 123690457 c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475363 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 83027 1 + 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558363 1 + 19675229 c i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498252 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431166 1 - 91754291 c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604230 1 - 1977891 c i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467539 1 + 7796314 c i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949056 1 - 74750902 C i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 7429760 1 + 22200726 c i proCoq1.NW_012133858v1 C 0 C 0 s mm10.chr16 65444405 1 - 98207768 C i mm10.chr16 C 0 C 0 e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C a score=24778.000000 s hg38.chr3_KI270779v1_alt 137863 3 + 205312 cac s panTro5.chr3 200131387 3 + 202621043 cac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103110 3 + 190779 cac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45386 3 - 55620 cac i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892425 3 + 123690457 cac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475364 3 + 204787373 CAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 83028 3 + 192460366 cac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558364 3 + 19675229 cac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498253 3 + 16847902 CAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431167 3 - 91754291 cac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604231 3 - 1977891 cac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467540 3 + 7796314 cac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949057 3 - 74750902 CAT i calJac3.chr17 C 0 C 0 s proCoq1.NW_012133858v1 7429761 3 + 22200726 cac i proCoq1.NW_012133858v1 C 0 I 140 e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C a score=44936.000000 s hg38.chr3_KI270779v1_alt 137866 8 + 205312 caccacca s panTro5.chr3 200131390 8 + 202621043 caccacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103113 8 + 190779 caccacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45389 8 - 55620 caccacca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892428 8 + 123690457 caccacca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202475367 8 + 204787373 CAACACCA i rheMac8.chr2 C 0 I 3920 s macFas5.chr2 83031 8 + 192460366 caacacca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558367 8 + 19675229 caacacca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498256 8 + 16847902 CAACACAA i cerAty1.NW_012004056v1 C 0 I 18 s chlSab2.chr15 431170 8 - 91754291 caccacca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604234 8 - 1977891 caacacca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467543 8 + 7796314 caccacca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949060 8 - 74750902 CTCCATCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C a score=25332.000000 s hg38.chr3_KI270779v1_alt 137874 9 + 205312 tcgccagca s panTro5.chr3 200131398 9 + 202621043 tcgccagca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103121 9 + 190779 tcgccagca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45397 9 - 55620 tcgccagca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892436 9 + 123690457 ccaccatca i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 83039 9 + 192460366 acgctacca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558375 9 + 19675229 acgctacca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498282 9 + 16847902 acactacca i cerAty1.NW_012004056v1 I 18 C 0 s chlSab2.chr15 431178 9 - 91754291 acactacca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604242 9 - 1977891 acactacca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467551 6 + 7796314 ---ccacca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949068 9 - 74750902 CCGTCTGCA i calJac3.chr17 C 0 I 300 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C e rheMac8.chr2 202475375 3920 + 204787373 I a score=36992.000000 s hg38.chr3_KI270779v1_alt 137883 16 + 205312 ctaccaccaccaccac s panTro5.chr3 200131407 16 + 202621043 ctaccaccaccaccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103130 16 + 190779 ctaccaccaccaccac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45406 16 - 55620 ctaccaccatcgccac i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892445 16 + 123690457 ccaccaccatcaccat i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 83048 16 + 192460366 ccatcaccacctccac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 558384 16 + 19675229 ccatccactcacccgc i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 498291 10 + 16847902 ccatcacaac------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431187 16 - 91754291 ccatcaccacctccat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604251 16 - 1977891 ccaccaccaacactac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467557 16 + 7796314 gcaccaacactaccac i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e rheMac8.chr2 202475375 3920 + 204787373 I a score=37544.000000 s hg38.chr3_KI270779v1_alt 137899 20 + 205312 catcatcgtcaccaccaaca s panTro5.chr3 200131423 17 + 202621043 catcatc---accaccaaca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 45422 11 - 55620 ---------catcgccagca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892461 20 + 123690457 caccaccattgccaacatca i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 83064 20 + 192460366 cgccaccaccaccaccaaca i macFas5.chr2 C 0 M 14732 s macNem1.NW_012014355v1 558401 19 + 19675229 caccaccaccaccacc-aca i macNem1.NW_012014355v1 I 1 I 3 s cerAty1.NW_012004056v1 498301 20 + 16847902 caccaccaacactaccaaca i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 431203 20 - 91754291 cgccaccaccaccaccacca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 604267 20 - 1977891 caccatcaccaccaccacca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 467573 20 + 7796314 catggcaaccaccaccaaca i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e rheMac8.chr2 202475375 3920 + 204787373 I a score=48774.000000 s hg38.chr3_KI270779v1_alt 137919 24 + 205312 ctaccatcaccatcaccatcacca s panTro5.chr3 200131440 24 + 202621043 ctaccaccaccatcaccatcacca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 45433 24 - 55620 ctaccaccaccaccatcatcgtca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892481 24 + 123690457 ccaccatcgccaccaccatcacca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558423 24 + 19675229 ctaccatcaccaccaccaccacca i macNem1.NW_012014355v1 I 3 I 7 s cerAty1.NW_012004056v1 498324 23 + 16847902 ctaccatcaccacc-tcaccacca i cerAty1.NW_012004056v1 I 3 I 9 s chlSab2.chr15 431223 24 - 91754291 acactaccaacactgccaccatca i chlSab2.chr15 C 0 I 3 s manLeu1.NW_012102020v1 604287 24 - 1977891 ccgtctccaccaccaccaacacta i manLeu1.NW_012102020v1 C 0 I 429 s colAng1.NW_012118932v1 467593 24 + 7796314 ctaccaacactgccaccatcacca i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=4624.000000 s hg38.chr3_KI270779v1_alt 137943 8 + 205312 ---ccaccacc s panTro5.chr3 200131464 6 + 202621043 ---ccacca-- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 45457 6 - 55620 ---ccacca-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892505 6 + 123690457 ---tcacca-- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558454 8 + 19675229 ccaccatc--- i macNem1.NW_012014355v1 I 7 C 0 s cerAty1.NW_012004056v1 498356 8 + 16847902 tcaccacc--- i cerAty1.NW_012004056v1 I 9 C 0 s chlSab2.chr15 431250 8 - 91754291 cttccacc--- i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 604740 8 - 1977891 CCACCACC--- i manLeu1.NW_012102020v1 I 429 C 0 s colAng1.NW_012118932v1 467617 8 + 7796314 cctccacc--- i colAng1.NW_012118932v1 C 0 M 734 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=14788.000000 s hg38.chr3_KI270779v1_alt 137951 13 + 205312 acca-acactacca s panTro5.chr3 200131470 9 + 202621043 -----acactacca i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 45463 9 - 55620 -----acactacca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892511 9 + 123690457 -----ccattgcca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558462 14 + 19675229 accctactcaacca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498364 13 + 16847902 acca-acactacca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431258 13 - 91754291 acca-ccaccacca i chlSab2.chr15 C 0 I 6988 s manLeu1.NW_012102020v1 604748 13 - 1977891 ACCA-ACACTGcca i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e colAng1.NW_012118932v1 467625 734 + 7796314 M e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=211393.000000 s hg38.chr3_KI270779v1_alt 137964 202 + 205312 ccaccatcaccatcaccaccaccatcaccatcaccaccacca---tcaccatcacc------------accaccatcgccaccac----catcatcaccatcaccattaccattgccaccaccatcaccaccaccatcaccaccaccac---catcatcaccattgccaccacca-tcaccaccatcaccaccaccatcgccaccacca-----ccaccaccaccatcac s panTro5.chr3 200131479 198 + 202621043 ccaccatcaccatcaccaccaccaccatcatcatcaccatca---ccaccatcacc------------atcacca---ccaccaa----cactaccaccaccaccatcac---tgccacacccaacactaccaccattgccaccaccac---catcaccacca---ccaccacca-tcaccaccatcgccaccaccatcatcaccaccaataaaccaccaccgacatcac i panTro5.chr3 C 0 I 44 s gorGor5.CYUI01001831v1 45472 193 - 55620 ccaccatcaccatcaccaccaccatcaccatcgtcaccacca---tcaccatcact------------acca------tcgccag----cactaccaccaccaccaccac---caccaccaccaccgccgccgccgccgcc-ccgccac---catcgccgccaccgccaccgccacccgccaccatcaccgccaccgccaccaacacta-----ccaccaccaccaccat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892520 202 + 123690457 acatcaccaccatcgccaccaccatcaccgctaacactacca---ccaccatcgcc------------accatcaccaccaccac----taccaccaccatcgccaccaccatcaccaccatcaccattgccaacatcaccatcgccaa---catcaccaccaccactaccacca-ccaccaccatcaccaccaccatcaccaccacca-----ccaccatcaccaccat i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558476 204 + 19675229 ccatcacca-----accaccatacccac-------atcaccatt-ccaccaccacc-acaccctcaccaccaccccgcctcccacaccacactaccaccatcgccaccac---caccactaccaccattgccaccaccaccaccgccac---caccaccagcactaccaccatca-gcaccaccaccaacaccaataccaccaccacca-----ccgccaccaccaccac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498377 217 + 16847902 ccatcgctaccaccaccgccaccaccaccaacactgccaccattgccaccaccaccaacactaccaccatcaccacctccaccgc----caccatcaccaccaccaccac---caccactaccaacactgccaccatcaccaccaccaccaacactaccaacactgccaccatca-ccacctccaccaccaccatcaccactaccacca-----ctaccaccatcaccac i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 604761 196 - 1977891 ccatcaccacctccaccaccatcaccactaccaccaccaccagttccaccaccacc------------accaccgcctccaccac----caccaacactaccaccatcgc---caccaccaccaacactaccaccattgccaccaccac---cacagcca------ccaccacca-ccaacaccaataccgccaccatcaccaccacca-----ctgccgccaccaccac i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e colAng1.NW_012118932v1 467625 734 + 7796314 M e chlSab2.chr15 431271 6988 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=24398.000000 s hg38.chr3_KI270779v1_alt 138166 40 + 205312 catcaccaccatcactggccaccccccaaaaaataccacc s gorGor5.CYUI01001831v1 45665 34 - 55620 catcgtcaccacca------acaccaccaacactaccacc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892722 31 + 123690457 ---cgccaccacca------ccattgccaacatcaccacc i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558680 34 + 19675229 caccaacactacca------ccatcgccaccatcaccacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498594 34 + 16847902 ttccaccaccacca------ccatcaccaccaccaccacc i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 604957 34 - 1977891 caccaacactacca------ccatcgccaccatcaccacc i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e colAng1.NW_012118932v1 467625 734 + 7796314 M e chlSab2.chr15 431271 6988 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I e panTro5.chr3 200131677 44 + 202621043 I a score=103158.000000 s hg38.chr3_KI270779v1_alt 138206 93 + 205312 atcggccaccaccaccatc------------------accacc--------accatcaccatcgccacc-accaccatca-------------------ccaccaccac-caccatcaccaccat-------------cattgccaccaccat s panTro5.chr3 200131721 117 + 202621043 atcggccaccaccaccacc------------------atcatccatcacgcaccatcaccatcaccatctaccaccaccaa------------------ccactaccacacaccatcaccgccatacccaacataccacattgccaccaccac i panTro5.chr3 I 44 C 0 s gorGor5.CYUI01001831v1 45699 92 - 55620 -accaccaccaccaccatc------------------accacc--------aacaccactaccaccacc-accaccatca-------------------tcgtcaccac-caccatcaccaccaa-------------cactaccaccaccac i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892753 92 + 123690457 -atcgccaccatcaccacc------------------accacc--------accaccaccaccatcgcc-accatcacca-------------------ccaccaccac-caccatcaccaccat-------------caccaccaccaccac i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558714 92 + 19675229 -attaccaccatcaccact------------------tccacc--------accaccaccaacactacc-accatcagca-------------------ctaccaccaa-caccaacactaccac-------------catcgccaccaccac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498628 129 + 16847902 -accaccgccaccaccaccaacactaccaccattgcgaccacc--------accaacaacaacactacc-accatcaccaccattaccaccaaacacttccaccaccac-caccaacactaccac-------------catcagcaccaccac i cerAty1.NW_012004056v1 C 0 I 21 s manLeu1.NW_012102020v1 604991 92 - 1977891 -attaccaccatcaccact------------------tccacc--------accaccaccaacactacc-accatcagca-------------------ccaccacgaa-caccaacactaccac-------------catcgccaccaccac i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e panPan2.chrUn_NW_014024201v1 103146 0 + 190779 C e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e colAng1.NW_012118932v1 467625 734 + 7796314 M e chlSab2.chr15 431271 6988 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=20262.000000 s hg38.chr3_KI270779v1_alt 138299 21 + 205312 ca-tcaccaccatca--ccaccac--- s panTro5.chr3 200131838 24 + 202621043 caatcaccaccaccaatcgaccac--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103146 21 + 190779 ca-tcgtcaccacca--acactac--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45791 21 - 55620 ca-tcatcaccacca--ccaccac--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892845 21 + 123690457 ca-tcgccaccatca--ccaccat--- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558806 21 + 19675229 ----tgccaccacca--ccactgccaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498778 21 + 16847902 ----cgccaccacca--ccactgccaa i cerAty1.NW_012004056v1 I 21 C 0 s manLeu1.NW_012102020v1 605083 21 - 1977891 ----cgccaccacca--ccactgccaa i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e colAng1.NW_012118932v1 467625 734 + 7796314 M e chlSab2.chr15 431271 6988 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=22610.000000 s hg38.chr3_KI270779v1_alt 138320 9 + 205312 caccaccat s panTro5.chr3 200131862 9 + 202621043 caccatcgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103167 9 + 190779 caccaccat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45812 9 - 55620 caccaccat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892866 9 + 123690457 tgccaccac i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558827 9 + 19675229 cactaccac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498799 9 + 16847902 cactaccac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438259 9 - 91754291 caccaccac i chlSab2.chr15 I 6988 C 0 s manLeu1.NW_012102020v1 605104 9 - 1977891 cactaccac i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e colAng1.NW_012118932v1 467625 734 + 7796314 M e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=264045.000000 s hg38.chr3_KI270779v1_alt 138329 109 + 205312 c-accaccaccaccatcgccaccatcacccccaacaccac---caccatc---accaccatcaccaccaccatcaccaccatcaccatc------------gccactgccacctccaccgccactacc s panTro5.chr3 200131871 113 + 202621043 ccaccatcacccccaacaccaccatcaccaccatcaccac---caccatcgccaccaccaccaccaccaccatcaccaccatcaccacc------------accactgccacctccaccgccactacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103176 109 + 190779 c-accatcaccaccaccaccaacactaccaccaccatcac---catcacc---accaccaccaccaccaccatcaccaccatcaccacc------------accactgccacctccaccgccactacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 45821 109 - 55620 c-accaccaccaccaccaccaccaccatcatcaccaccac---caccatc---accaccaccaccaccaccaccatcatcgtcaccacc------------accatcaccaccaacactaccaccacc i gorGor5.CYUI01001831v1 C 0 I 231 s nomLeu3.chr11 120892875 106 + 123690457 c-atcgccaccgccaacactaccattgctgccaccaccac---cgccatc------accattgccacctccaccaccaccatcgccacc------------gccactgccgccatcaccgccaccaac i nomLeu3.chr11 C 0 I 3 s macNem1.NW_012014355v1 558836 109 + 19675229 c-aaaatcaccaccatcaccaccactaccaccatcaccacttccaccccc---accactatcagcaccaccatcaacaccaaccctatc------------atcaccgccaccaccaccaacact--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498808 109 + 16847902 c-aaaatcaccaccatcaccaccactaccaccatcaccacttccaccacc---accactatcagcaccaccatcaacaccaacactatc------------atcaccgccatcaccaccaacact--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438268 105 - 91754291 c-aacactaccaccatcgccaccaccaccaccatcaccactttcaccacc---ac----atcagcaccaccatcaacaccaacactatc------------atcaccgccaccaccaccaacact--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605113 109 - 1977891 c-aaaatcaccaccatcaccaccactaccaccatcaccacTTCCACAACC---ACCACTATCAGCACCACCATCAACACCAACACTATC------------ATCACCGCCACCACCACCAACACT--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468374 106 + 7796314 ----------caccatcaccaccactaccaccatcac------caccact---accaccatcagcaccaccaccaacaccaacactaccaccatcaccactaccaccgccaccaccaccaacact--- i colAng1.NW_012118932v1 M 734 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=17190.000000 s hg38.chr3_KI270779v1_alt 138438 4 + 205312 acca s panTro5.chr3 200131984 4 + 202621043 acca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103285 4 + 190779 acca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46161 4 - 55620 acca i gorGor5.CYUI01001831v1 I 231 C 0 s nomLeu3.chr11 120892984 4 + 123690457 acca i nomLeu3.chr11 I 3 C 0 s macNem1.NW_012014355v1 558945 4 + 19675229 acca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498917 4 + 16847902 acca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438373 4 - 91754291 acca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605222 4 - 1977891 ACCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468480 4 + 7796314 acca i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e calJac3.chr17 949077 300 - 74750902 I e saiBol1.JH378146 472861 0 + 17725628 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=40425.000000 s hg38.chr3_KI270779v1_alt 138442 9 + 205312 ccaccacca s panTro5.chr3 200131988 9 + 202621043 ccaccacca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103289 9 + 190779 ccaccacca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46165 9 - 55620 ccaccacca i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892988 9 + 123690457 ccaccacca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558949 9 + 19675229 ccatcgcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498921 9 + 16847902 ccatcgcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438377 9 - 91754291 ccatcgcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605226 9 - 1977891 CCATCGCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468484 9 + 7796314 ccatcgcca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949377 9 - 74750902 CCACCACCA i calJac3.chr17 I 300 I 1 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e saiBol1.JH378146 472861 0 + 17725628 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=40122.000000 s hg38.chr3_KI270779v1_alt 138451 17 + 205312 ccaccaccaccactatc s panTro5.chr3 200131997 8 + 202621043 ccac---------tatc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103298 8 + 190779 ccac---------tatc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46174 17 - 55620 tcaccaccaccactatc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120892997 17 + 123690457 tcaccaccaccacTATC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558958 17 + 19675229 ccacgaccaccactatg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498930 17 + 16847902 ccacgaccaccacTATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438386 17 - 91754291 ccacgaccaccactatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605235 17 - 1977891 CCACGACCACCACTATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468493 17 + 7796314 ccatgaccaccacTATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949387 10 - 74750902 CCAGCACC-------TT i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 472861 17 + 17725628 CCAGCACCACCACCATC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e dasNov3.JH569502 3906526 0 + 6579706 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=72016.000000 s hg38.chr3_KI270779v1_alt 138468 14 + 205312 gccatcaccGTCCC s panTro5.chr3 200132005 14 + 202621043 accatcaccGTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103306 14 + 190779 accatcaccGTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46191 14 - 55620 gccatcaccGTCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893014 14 + 123690457 GCCATCACCGTCCG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558975 14 + 19675229 gccatcaccaTCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498947 14 + 16847902 GCCATCACCATCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438403 14 - 91754291 gccatcaccaTCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605252 14 - 1977891 GCCATCACCATCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468510 14 + 7796314 GCCGTCACCATCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949397 14 - 74750902 TCCATCACCGTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472878 14 + 17725628 TCCATCACCGTCTG i saiBol1.JH378146 C 0 C 0 s dasNov3.JH569502 3906526 14 + 6579706 GACAGCACCATCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e cebCap1.NW_016107444v1 437388 53 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=15678.000000 s hg38.chr3_KI270779v1_alt 138482 2 + 205312 CA s panTro5.chr3 200132019 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103320 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46205 2 - 55620 CA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893028 2 + 123690457 CA i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558989 2 + 19675229 CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498961 2 + 16847902 CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438417 2 - 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605266 2 - 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468524 2 + 7796314 CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949411 2 - 74750902 CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472892 2 + 17725628 CA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437441 2 - 6778120 CA i cebCap1.NW_016107444v1 I 53 C 0 s dasNov3.JH569502 3906540 2 + 6579706 TA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=106531.000000 s hg38.chr3_KI270779v1_alt 138484 20 + 205312 GGTGTGGGG-TCCGAGCATGG s panTro5.chr3 200132021 20 + 202621043 GGTGTGGGG-TCCGAGCATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103322 20 + 190779 GGTGTGGGG-TCCGAGCATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46207 20 - 55620 GGTGTGGGG-TCCGAGCATGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893030 20 + 123690457 GGTATGGGG-TCCGAGCAGAG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 558991 19 + 19675229 GGTGTGGGG-TCCGAGCAT-G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498963 19 + 16847902 GGTGTGGGG-TCCGAGCAT-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438419 19 - 91754291 GGTGTGGGG-TCCAAGCAC-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605268 19 - 1977891 GGTGCGGGG-TCCGAGCAT-G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468526 19 + 7796314 GGTGTGGGG-TCCGAGCAC-G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949413 19 - 74750902 -GTGTGGGG-TTTGAGCGCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472894 20 + 17725628 GGTGTGGGG-TCTGAGCACGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437443 20 - 6778120 GGTGTGGGG-TCCGAGCACGG i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65444406 8 - 98207768 AGTGTGGG------------- i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3906542 21 + 6579706 GGCATGGGGTTCCCAGTACTG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e otoGar3.GL873829 428318 1 - 608964 I e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=-8288.000000 s hg38.chr3_KI270779v1_alt 138504 2 + 205312 CC- s panTro5.chr3 200132041 2 + 202621043 CC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103342 2 + 190779 CC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46227 2 - 55620 CC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893050 2 + 123690457 CT- i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 559010 2 + 19675229 CT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498982 2 + 16847902 CT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438438 2 - 91754291 CT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605287 2 - 1977891 CA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468545 2 + 7796314 CT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949432 2 - 74750902 TT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472914 2 + 17725628 CT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437463 2 - 6778120 CT- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 428319 1 - 608964 C-- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65444415 1 - 98207768 C-- i mm10.chr16 I 1 C 0 s dasNov3.JH569502 3906563 3 + 6579706 CAT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e canFam3.chr33 29079971 66 + 31377067 I e aotNan1.NW_018492867v1 5535 65 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=224191.000000 s hg38.chr3_KI270779v1_alt 138506 24 + 205312 CGGGAAGGAGGAAAGCCT-GGAGCA s panTro5.chr3 200132043 24 + 202621043 CGGGAAGGAGGAAAGCCT-GGAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103344 24 + 190779 CGGGAAGGAGGAAAGCCT-GGAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46229 24 - 55620 TGGGAAGGAGGAAAGCCT-GGAGCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893052 24 + 123690457 CGGGAAGGAGGAAAGCCT-GGAGCG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 559012 24 + 19675229 CAGGAAGGAGAGAAGCCT-GGAGCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 498984 24 + 16847902 CAGGAAGGAGAGAAGCCT-GGAGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438440 24 - 91754291 CAGGAAGGAGAGAAGCCT-GGAGCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605289 24 - 1977891 CAGGAAGGAGAGAAGCCT-GGAGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468547 24 + 7796314 CAGGAAGGAGAGAagcct-gcagcg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949434 25 - 74750902 CGGGGAAGAGGAAAGCCTAGAAACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472916 24 + 17725628 CGGGAAGGAGGAAAGCCT-GGAGCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437465 24 - 6778120 CGGGAAGCAGGAAAGCCT-GGAACG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5600 23 + 21398 CGGGAAGGAGG-AAGCCT-GGAGCG i aotNan1.NW_018492867v1 I 65 C 0 s otoGar3.GL873829 428320 24 - 608964 TAGGACAGAGGAAGGCCT-GGGGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444416 24 - 98207768 CAGGACGGAAGGAAGTCT-GCAGCA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3906566 24 + 6579706 TAGGAAGGAGGAAAGTCT-GGAGCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e canFam3.chr33 29079971 66 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=26046.000000 s hg38.chr3_KI270779v1_alt 138530 3 + 205312 GCC s panTro5.chr3 200132067 3 + 202621043 GCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103368 3 + 190779 GCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46253 3 - 55620 GCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893076 3 + 123690457 GCC i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 559036 3 + 19675229 GCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499008 3 + 16847902 GCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438464 3 - 91754291 GCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605313 3 - 1977891 GCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468571 3 + 7796314 gca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949459 3 - 74750902 GCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472940 3 + 17725628 GCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437489 3 - 6778120 GCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5623 3 + 21398 GCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 428344 3 - 608964 GCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444440 3 - 98207768 GCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29080037 3 + 31377067 GCC i canFam3.chr33 I 66 C 0 s dasNov3.JH569502 3906590 3 + 6579706 GCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202475375 3920 + 204787373 I a score=646533.000000 s hg38.chr3_KI270779v1_alt 138533 89 + 205312 GCCTGCAGCCCCACCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTG s panTro5.chr3 200132070 89 + 202621043 GCCTGCAGCCCCACCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103371 89 + 190779 GCCTGCAACCCCACCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46256 89 - 55620 GCCTGCAGCCCCACCCCGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893079 89 + 123690457 GCCTGCAGCCCCACCCTGGATGCCTGCTGCAGAGTGGGAACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479295 89 + 204787373 GCCTGTAGCCCCATCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGcttttcct-cctccctgacacaagcaggatgacgcacccctg i rheMac8.chr2 I 3920 C 0 s macNem1.NW_012014355v1 559039 89 + 19675229 GCCTGTAGCCCCATCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGcttttcct-cctccctgacacaagcaggatgacgcacccctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499011 89 + 16847902 GCCTGTAGACCCATCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGACGCACCCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438467 89 - 91754291 GCCTGTAGCCCCATCCCGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGcttttcct-cctccctgacacaagcaggatgacgcacccctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605316 89 - 1977891 GCCTGTAGCCCCATCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCTCTGACACAAGCAGGATGATGCACCCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468574 89 + 7796314 gcctgtagccccatcctgggtgcctgctgcAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTAACACAAGCAGGATGACGCACCCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949462 70 - 74750902 GCTTGCAGCCCCACCCTGGGTGCC--------------------TGGGCTTTTCCTCCCTCCCTGACACAAGTGGGATGGTGCACCCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 472943 68 + 17725628 GCCTGCAGCTGCACTCCAGGTGCC--------------------TGGGCTTTTCCT-CCTCCCTGACGC-AGCGGGATGATGCCCCCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437492 66 - 6778120 GCCTGCAGCCCCAC-CCGGGTGCC--------------------TGGGC-TTTCCT-CCTCCCTGACAC-AGCGGGATGGTGCCCCCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5626 69 + 21398 GCCTGCAGCCCCACCCCAGGTGCC--------------------TGGGCTTTTCCT-CCTCCCTGACACAAGCGGGATGATGCGCCCCTG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 428347 76 - 608964 ----------TCACCCCAGGTGCATGCTG-GGGGCCGTGACTCCTGACTTTCTCCC-CCT--CTAAAACCAGCTggatggcacacacttg i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444443 87 - 98207768 GCCT-CACTGCTACTACAGGAGCATGCCCACAGAAAGCGACTCCTGGTC-TTTGCT-CTATAGTCACGCAGGCTAGAGGACAAATACATG i mm10.chr16 C 0 C 0 s canFam3.chr33 29080040 86 + 31377067 GCGAGGAGCACCCCCC--GGCGCTTCTCTGGGAGGGGAGCCTGCAGCCCCCCACCC-CCTGTGTGACACGGGCCAGGCGGGCCACACGG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3906593 37 + 6579706 GCCTCCAGGCTTGCTCTGGG-------------------------------------CTT-----AGGCAGGtcacatg----------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7429764 140 + 22200726 I e micMur3.chr1 25914984 195 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=335816.000000 s hg38.chr3_KI270779v1_alt 138622 30 + 205312 CGTGACACCTTCCTTGGGTGTACCTGGACC- s panTro5.chr3 200132159 30 + 202621043 CGTGACACCTTCCTTGGGTGTACCTGGACC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103460 30 + 190779 CGTGACACCTTCCTTGGGTGTACCTGGACC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46345 30 - 55620 CATGACACCTTCCTTGGGTGTACCTGGACC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893168 30 + 123690457 CGTGACACCTTCCTCGGGTGTACTTGGACC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479384 30 + 204787373 tgtgacaccttccttgggtgtacttggacc- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559128 30 + 19675229 tgtgacaccttccttgggtgtacttggacc- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499100 30 + 16847902 TGTGACACCTTCCTCGGGTGTACTTGGACC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438556 30 - 91754291 tgtgacaccttcctcggatgtacttggacc- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605405 30 - 1977891 TGTGACACCTTCCTCGGGTGTACTTGGACC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468663 30 + 7796314 CGTGACACCTTCCTCAGGTGTACTTGGACC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949532 30 - 74750902 CGTGGCACCTTCCTCGGGCGTACGTGGACC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473011 30 + 17725628 CGTGGCACCTCCCTCGGGCGCACTTGGACC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437558 30 - 6778120 CATGGCACCTTCCTCAGGCGTACTTGGGCC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5695 30 + 21398 CGTGGCACCTTCCTCGGGCATGCTTGGACC- i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7429904 30 + 22200726 CGTGACACCTCCCTTGGGTGTACTTGGATG- i proCoq1.NW_012133858v1 I 140 C 0 s otoGar3.GL873829 428423 30 - 608964 cttgacccctcctttgggtgtacttggatg- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444530 29 - 98207768 CATGATGTC-CAGTTGGGTTTACTGAGGAC- i mm10.chr16 C 0 I 1 s canFam3.chr33 29080126 29 + 31377067 -CGGACACCCGCCCAAGGCGTACTCGGGAC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3906630 31 + 6579706 cttgacacctccatggggcacactcaagatg i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25914984 195 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=894715.000000 s hg38.chr3_KI270779v1_alt 138652 72 + 205312 GTGTGAAATTCCT--------AG--AGTTGGGTAATTCCCCTCCTTTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGCA s panTro5.chr3 200132189 72 + 202621043 GTGTGAAATTCCT--------AG--AGTTGGGTAATTCCCCTCCTTTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103490 72 + 190779 ATGTGAAATTCCT--------AG--AGTTGGGTAATTCCCCTCCTTTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46375 72 - 55620 GTGTGAAATTCCT--------AG--AGTTGGGTAATTCCCCTCCTTTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893198 71 + 123690457 GTGTGAAATTCCT--------AGGCAGTTGGGGAACTCC---CCTTTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479414 74 + 204787373 atgtgaaattcct--------aggcagttgggtaattcccctcctttcaccttcacAGCACACCAAGTAACCAGTGAAAGCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559158 74 + 19675229 atgtgaaattcct--------aggcagttgggtaattcccctcctttcaccttcacAGCACACCAAGTAACCAGTGAAAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499130 74 + 16847902 ATGTGAAATTCCT--------AGGCAGTTGGGCAATTCCCCTCCTTTCACCTTCATAGCACACCAAGTAACCAGTGAAAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438586 74 - 91754291 atgtgaaattcct--------aggcagttgggtaattcccctcctttcaccttcatagcacaccaagtaactagtgaaagca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605435 74 - 1977891 ATGTGAAATTCCT--------AGGCAGTTGGGTAATTCCCCTCCTTTCACCTTCATAGCACACCAAGTAACCAGTGAAAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468693 74 + 7796314 ATGTGAAATTCTT--------AGGCAGCTGGGTAATTCCCCTCCTTTCACCTTCATAGCACACCAAGTAACCAGTGAAAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949562 72 - 74750902 ATGTGACATC-CC--------AGGTAGTTGGGCACTTCCACTCCTTACTCCTTCATAGCACACC-AAAAACTAGCGACAGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473041 74 + 17725628 GTGTGACATTGCT--------AGGTAGTTGGGTACTTCCAGTCCTTACTCCTTCATAGCACACCAAAAAACTAGCGAAAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437588 72 - 6778120 GTGTGACATT-CC--------TAGTAGTTGGGTAATTCCACTCCTTACTCCTTCGTAGCACACA-AAACACTAGCGAAAGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5725 74 + 21398 GTGTGACATTCCT--------AGGTAGTTGGGTACTTCTACTCCTTACTCCTTCGCAGCACACCAAAAAACTTGCGAAAGCA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25915179 74 - 114275543 GTGTGAAAGTCCT--------AGCTAGTTGGGTCATTCTACTCCTTTCTCCTTCATAGCACGTCAAAAAACTAATGAAAGCA i micMur3.chr1 I 195 I 195 s proCoq1.NW_012133858v1 7429934 74 + 22200726 GTGTGAAATTCCT--------CGCTAGTTGGGTCATTCCACTCCTTTCTCCGTCATAGCATGGCAAAAAGCTAATGAAAGCA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 428453 74 - 608964 gtgtgaaattcct--------agctggttgggtcattcctctcctttctccttcacagcatatcaaaaaactagtgaaaaca i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444560 73 - 98207768 GTGTGGAATTGCT--------AGCTGCCTGAGTAATTACATGCTTTCTTCCTTCATTGCACATC-AAAAGTCAGTCAAAGCC i mm10.chr16 I 1 C 0 s canFam3.chr33 29080155 82 + 31377067 GTGCGACAGCCCTCGCGCCCCAGCGAGCCGGCCGATTCCAGCCCTTTGCCCCTCTAAGCGCATCAGAAAGAGAGCGAAGGCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3906661 74 + 6579706 gtgtgaaattcct--------cgctcgttggataattctactcctttctccttcacagcatatcataaagcaagtaaaggca i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M a score=46527.000000 s hg38.chr3_KI270779v1_alt 138724 4 + 205312 GTGT s panTro5.chr3 200132261 4 + 202621043 GTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103562 4 + 190779 GTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46447 4 - 55620 GTGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893269 4 + 123690457 GTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479488 4 + 204787373 GTGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559232 4 + 19675229 GTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499204 4 + 16847902 GTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438660 4 - 91754291 gtgt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605509 4 - 1977891 GTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468767 4 + 7796314 GTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949634 4 - 74750902 GTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473115 4 + 17725628 GTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437660 4 - 6778120 GTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 5799 4 + 21398 GCAT i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7430008 4 + 22200726 ATGT i proCoq1.NW_012133858v1 C 0 I 144 s otoGar3.GL873829 428527 4 - 608964 atgg i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444633 4 - 98207768 ATGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29080237 4 + 31377067 GTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3906735 4 + 6579706 atgt i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25915253 195 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=988471.000000 s hg38.chr3_KI270779v1_alt 138728 157 + 205312 AATCAAAGGGGTAA-CCTGAACACACTC-AAT----GTAAGAGAAGA-CATTTGCAGCAATTATCAAG-AACAA----------------------------------------------AAGACATGTG----------GCCTTCGTA---------------CTGATTGCCACACCCCAGCATATGGGAACAGA-----------------GATG------------GCGCACTGCTACATCGGAGACAG------CCTCCCACACACG s panTro5.chr3 200132265 157 + 202621043 AATCAAAGGGGTAA-CCTGAACACACTC-AAT----GTAAGAGAAGA-CATTTGCAGCAATTATCAAG-AACAA----------------------------------------------AAGACATGTG----------GCCTTCGTA---------------CTGATTGCCACACCCCAGCATATGGGAACAGA-----------------GATG------------GCTCACTGCTACATCGGAGACAG------CCTCCCACACACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103566 157 + 190779 AATCAAAGGGGTAA-CCTGAACACACTC-AAT----GTAAGAGAAGA-CATTTGCAGCAATTATCAAG-AACAA----------------------------------------------AAGACATGTG----------GCCTTCGTA---------------CTGATTGCCACACCCCAGCATATGGGAACAGA-----------------GATG------------GCTCACTGCTACATCGGAGACAG------CCTCCCACACACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46451 157 - 55620 AATCAAAGGGGTAA-CCTGAACACGCTC-AAT----GTAAGAGAAGA-CATTTGCAGCAATTATCAAG-AACAA----------------------------------------------AAGACATGTG----------GCCTTCGTA---------------CTGATTGCCACACCCCAGCATATGGTAACAGA-----------------GATG------------GCGCACTGCTACATCGGAGACAG------CCTCCCACACACG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893273 158 + 123690457 AATCAAAGGGGTAA-CCTGAACACACTC-AAT----GTAAGAGAAGACCATTTGCAGCAATTATCAAG-AACAA----------------------------------------------AAGACATGTG----------GCCTTCGTA---------------TTGATTGCCACACCCCAGCATATGGGAACAGA-----------------GATG------------GCGCACTGCTGCGTCGGAGACAG------CCTCCCACACACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479492 201 + 204787373 AATCAAAGGGGTAA-CCTGAGCACATTC-AGT----GTAGGAGAAGACCATTTGCAGCAATTATCAAG-GACAAAAGACatcgcttctcggccttttggctaagatcaagtgaagAAC--AAGACATGTG----------GCCTTTGCA---------------CTGATTGCCACACACCAGCATATGGG-ACAGA-----------------GACG------------GTGCACTGTTGCATCGGAGACGG------CCTCCCACACACG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559236 201 + 19675229 AATCAAAGGGGTAA-CCTGAGCACACTC-AGT----GTAGGAGAAGACCATTTGCAGCAATTATCAAG-GACAAAAGACatcgcttctcggccttttggctaagatcaagtgaagAAC--AAGACATGTG----------GCCTTTGCA---------------CTGATTGCCACACACCAGCATATGGG-ACAGA-----------------GACG------------GTGCACTGTTGCATCGGAGACGG------CCTCCCACACACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499208 201 + 16847902 AATCAAAGGGGTAA-CCTGAGCACACTC-AGT----GTAGGAGAAGACCATTTGCAGCAATTATCAAG-GACAAAAGACatcgcttctcggccttttggctaagatcaagtgaagAAC--AAGACCTGTG----------GCCTTTGCA---------------CTGATTGCCACACACCAGCATATGGG-ACAGA-----------------GACG------------GTGCACTGTTGCATCGGAGACGG------CCTCCCACACACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438664 201 - 91754291 aatcaaaggggtaa-cctGAGCACACTC-AGT----GTAGGAGAAGACCATTTGCAGTAATTATCAAG-AACGAAAGACatcgcttctcggccttttggctaagatcaagtgaagAAC--AAAAGACGTG----------GCCTTTGCA---------------CTGATTGCTACACACCAGCATATGAG-ACAGA-----------------AACG------------GTGCACTGTTGCGTTGGAGACGG------CCTCCCACACACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605513 201 - 1977891 AATCAAAGGGGTAA-CCTGAGCACACTC-AGT----GTAGGAGAAGACCATTTGCAGCAATTATCAAG-GACAAAAGACatcgcttctcggccttttggctaagatcaagtgaagAAC--AAGACATGTG----------GCCTTTGCA---------------CTGATTGCCACACACCAGCATATGGG-ACAGA-----------------GACG------------GTGCACTGTTGCGTCGGAGACAG------CCTCCCACACACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468771 204 + 7796314 AATAAAAGGGGTAA-CCTGAACACACTC-AAT----GTAGGAGAAGACCATTTGCAGCAATTATCAAG-AACGAAAGGCattgcttctcggccttttggctaagatcaagtgaagAACAAAAGACATGTG----------GCCTTTGCA---------------CTGATTGCCACACACCAGCATATGGGAACAGA-----------------GATG------------GTGCACTGTTGCATCGGAGACAG------CCTCCCACACACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949638 170 - 74750902 GACTAAAGGGGTGA-CCTGAACACACTT-GTT----GTAAGGGAAGAACATGCGCTGCAATGATCAAG-AACAA----------------------------------------------GAGACATGTG----------ACCTTCACA---------------CCGACTGCCACACACCAGCCTGTGGGAACAGA-----------------AGCAGGGAGCAGAAGTGGGCACCGTCACGTCGGAGAGAG------CCTCCTCCACGAG i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 473119 155 + 17725628 GATTAAAGGGGTAA-CCTGAACACACCT-GAC----GTAAGGGAAGACCGTG---TGCAATTATCAAG-AACAA----------------------------------------------GAGACATGTG----------ACCCTCGCA---------------CTGATTGCCACACACCAGCTTCTGGGAACAGA-----------------AGCG------------GGGCGCTGTCACGGCGGAAAGAG------CCTCCTCCACGCG i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 437664 156 - 6778120 GATTAAAGGGGCAA-CCTGAACACACCT-GAG----GTAAGGGGAGACCAAGGGGGGCAATTATCAAG-AACAG----------------------------------------------GAGACATGTG----------ACCTTCACA---------------CTGATTGCCACACACCAGCTTAT-GGAACAGA-----------------CGCG------------GGGCGCTGTCATGTCGGAGACAG-------CTCTTCCACGCG i cebCap1.NW_016107444v1 C 0 I 5 s aotNan1.NW_018492867v1 5803 155 + 21398 GATCAAAGGGGTAA-GCTGA--ACACTT-GAT----GTAAGGGAAGACCACGCGCAGCGATTATCCAG-AACAA----------------------------------------------GAGACATGTG----------ACCTTCGCA---------------CTGATTGCCACACACCAGCTTATGGGAAC-GA-----------------GCCG------------GGGCACCGTCACGTCGGAGAGAG------CCTCCTCCACACG i aotNan1.NW_018492867v1 C 0 I 5 s otoGar3.GL873829 428531 157 - 608964 aattacaggggcaa-cctGAACA-------------------GAAAACCACTTCTGGGAATTACCAGG-AACAA----------------------------------------------ACGAAGTGAG------------------A---------------CTGACTGCCACACGTCAGCATACGTGAATATATGACTGAGGACTGTTATGACT------------AAGAACTGTTGAGTCAGAGCCCGAGCCGCCTTCCCACTCA-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444637 61 - 98207768 -------TAGGCAG-GCCGAACACACCCTAAT----GTAAAAGAAACCCATCTGTGACAACCACCCAGTAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29080241 117 + 31377067 AATGACGGGGTCAGCCCTGGTCACAAGC------------------------------------CGGG-GGTAC----------------------------------------------GGGAC--GTG----------CCCTTCACA---------------ACCGGTGGCTCACCCGAGC-----GGTGTTGA-----------------GACC-------------CGCG-------GTCAGAGACTGAGTC--ACCCCCACACACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3906739 178 + 6579706 aattataggaatgatcctgaacatactc-catttgcatagaggaaaaccatttgcaGCAATTACCAGT-ACCAA----------------------------------------------ATTACACGAGTCTCCGAGTCTCCTTCACAATTCATCGAGTCTCCTTCACCTTCACAATTCATCGCTAATACACCAA-----------------GGTA------------TGGAAGCACTGTGTCAGAGACTG--------------AAA-- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7430012 144 + 22200726 I e micMur3.chr1 25915253 195 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=514204.000000 s hg38.chr3_KI270779v1_alt 138885 47 + 205312 GGAATCCACATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT s panTro5.chr3 200132422 47 + 202621043 GGAATCCACATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103723 47 + 190779 GGAATCCACATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46608 47 - 55620 GGAATCCACATTTCAACTGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893431 47 + 123690457 GGAATCCACATTTCAACCACCCACAGCCCCGTGCCTC--CTC--TCTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479693 47 + 204787373 GAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559437 47 + 19675229 GAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499409 47 + 16847902 GAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438865 47 - 91754291 GAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605714 47 - 1977891 GAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTC--CTC--TCTCCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 468975 47 + 7796314 GAGATCCATATTTCAACCACCCACAGCCCTGTGCCTC--CTC--TCTCCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949813 47 - 74750902 GGAATCCACATTCCAACCACCCACGGCCCCCTGCTTC--TTC--TCTCCCC i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 473279 46 + 17725628 GGAATCCTCATTTCAACCACCCACAG-CCCCTGCCTC--TTC--TCTCCCT i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 437825 46 - 6778120 GGAATCCGCATTTCAACCGCCCGCAG-CCCCCGCCTC--TTC--TCTCCCT i cebCap1.NW_016107444v1 I 5 C 0 s aotNan1.NW_018492867v1 5963 45 + 21398 GGAATCCACATTTCAACCAGCCACAG--CCCCGCCCC--TTC--TCTCCCT i aotNan1.NW_018492867v1 I 5 C 0 s proCoq1.NW_012133858v1 7430156 47 + 22200726 GGAACCCACACTTCAACTGCCCACAGCCCCCACCCTG--CCC--TCCCTCT i proCoq1.NW_012133858v1 I 144 C 0 s otoGar3.GL873829 428688 46 - 608964 GGAACTCACATTTCCACTGCCCAT-GCCCCGACCCTC--CTC--TCCCTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444698 41 - 98207768 ---GATCATGCCACAGCCAGCCACGGCCCT---TCTC--CTC--ACCTCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29080358 45 + 31377067 GGAGTCTGCGGCGCC----CCCGCAGCCCCTTGCCTG--CTCTGTCTGCCT i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3906917 49 + 6579706 GACCTCCACATTTCACTCATCTACAAACTCATCCCTCCACTC--TCTCCCT i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25915253 195 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=4221794.000000 s hg38.chr3_KI270779v1_alt 138932 393 + 205312 TCACCACCGG-CTCC------ATATAAG-CTTTTGGGTGCCCCCTGGATAAGTGGGTAATTCTCAG--------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccatgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatctcagtttcctgatctgtagaatggggat-----------gataaatagtatctgcctcgtggggt--ggctgtgat-catgacatgcag---------------taatgtacacgaagtg-ttagtgtcatcagtcttggctgttattatCACGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATGATTA-------------------------CAACTCACGGGGACTGGGATGGGAAAGGGCATGGC s panTro5.chr3 200132469 391 + 202621043 TCACCACCGG-CTCC------ATATAAG-CTTTTGGGTGCCCCCTGGATAAGTGGGTAATTCTCAG--------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccatgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatct--gtttcctgatctgtagaatggggat-----------gataaatagtatctgcctcgtggggt--ggctgtgat-catgacatgcag---------------taatgtacacgaagtg-ttagtgccatcagtcttggctgttattatCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATGATTA-------------------------CAACACACGGGGACTGGGATGGGAAAGGGCATGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 103770 391 + 190779 TCACCACCGG-CTCC------ATATAAG-CTTCTGGGTGCCCCCTGGATAAGTGGGTAATTCTCAG--------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccatgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatct--gtttcctgatctgtagaatggggat-----------gatgaatagtatctgcgtcgtggggt--ggctgtgat-catgacatgcag---------------taatgtacacgaagtg-ttagtgtcatcagtcttggctgttattatCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATGATTA-------------------------CAACACACGGGGACTGGGATGGGAAAGGGCATGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 46655 393 - 55620 TCACCACCGG-CTCC------ATATAAG-CTTTTGGGTGCCCCTTGGATAAGTGGGTAATTCTCAG--------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccacgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatctcagtttcctgatctgtagaatggggat-----------gataaatagtatctgcctcatggggt--ggctgtgat-catgacatgcag---------------taatgtactcgaagtg-ttagtgtcatcagtcttggctgttattatCACGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATGATTA-------------------------CAACACACGGGGACCGGGATGGGAAAGGGCATGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893478 393 + 123690457 TTACCACCGG-CTCC------ATATAAG-CTTTTGGGTGTCCCCTGGATAAGTGGGTAATTCGCAG--------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccatgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatctcagtttcctgatctgtagaatggggat-----------ggtaagtagtatctgcctcatggagt--ggctgtgat-catgacatgcaa---------------taaggtacataaagtg-ttagTGTAATCAGTCTTGGCTGTTATTATCACGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGCATTATTA-------------------------CAAGACACGGGGACTGGGATGGGAAGGGGCATGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202479740 378 + 204787373 TCACCACCAG-CTCC------TTATAAG-CTTTTG-GTGCCCCCTGG----------AATTCTCAG--------GAAGTCGGGAAGGcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaattgtcagtctatttgtatctcagtttcctgatctgtagagtggggat-----------gataaatcgtatccgcctcatggggt--ggttgtgat-catgacatgcaa---------------taatgtacgtgaagtg-ttagtgtcatcagtcttggctgttattatCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTA-------------------------CAACGCACAGGGACTGGGATGGGAGAGGGTGTGGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559484 378 + 19675229 TCACCACCAG-CTCC------TTATAAG-CTTTTG-GTGCCCCCTGG----------AATTCTCAG--------GAAGTCGGGAAGGcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaattgtcagtctatttgtatctcagtttcctgatctgtagagtggggat-----------gataaatcgtatccgcctcatggggt--ggttgtgat-catgacatgcaa---------------taatgtacgtgaagtg-ttagtgtcatcagtcttggctgttattatCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTA-------------------------CAACGCACAGGGACTGGGATGGGAGAGGGCGTGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499456 374 + 16847902 TCACCACCAG-CTCC------TTATAAG-CTTTTG-GTGCTCCTTGG----------AATTCTCAG--------AAAGTCGGGAAGGcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaatt----gtctatttgtgtctcagtttcctgatctgtagagtggggat-----------gataaatcgtatccgcctcatggggt--ggttgtgat-catgacatgcaa---------------taatgtacatgaagtg-ttagTGTCATCAGTCTTGGCTGTTGTTATCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTA-------------------------CAACGCACAGGGACTGGGATGGGAGAGGATGTGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438912 378 - 91754291 TCACCACCAG-CTCC------TTATAAG-CTTTTG-GTGCCCCCTGG----------AATTTTCAG--------GAAgttgggaaggcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaattgtcagtctatttgtatctcagtttcctgatctgtagagtggggat-----------gataaatcgtatctgcctcatggggt--ggttgtgat-catgacatgcaa---------------taatgtacatgaagtg-ttagtgtcatcagtcttggctgttattatCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAGTGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTACTA-------------------------CAACGCGCGGGGACTGGGATGGAAGAGGGCGTGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 605761 374 - 1977891 TCACCACCAG-CTCC------TTATAAG-CTTTTG-GTGCTCCTTGG----------AATTCTCAG--------AAAGTCGGGAAGGcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaatt----gtctatttgtgtctcagtttcctgatctgtagagtggggat-----------gataaatagtatccgcctcatggggt--ggttgtgat-catgacatgcaa---------------taacgtacgtgaagtg-ttagTGTCATCAGTCTTGGCTGTTATTATCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTA-------------------------CAATGCACGGGGACTGGGATGGGAGAGGATGTGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 469022 372 + 7796314 TCACCACCAG-CTCC------TTATAAG-CTTTTGAGTGCCCCCTGG----------AATTCTCAG--------GAAGTCGGgaaggcagattctagcctcagatg-------tcaaat---cacattgccacttcccagctctgggactttaggcaaattgccagtctatttgtatctcagttttctgatctgtagagtggggat-----------gataaatagtatccgcctcatggggt--gggtgtgat-catgacgtgcaa---------------tgatgtacatgaagtg-ttagCGTCATCAGTCTTGGCTGTTGTTATCATGA---TATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTA-------------------------CAACGCACGGGAACTGGGATGGGAGAGGGCA-GGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 949860 390 - 74750902 TCACCACCGG-CTTC------GTTTAAG-CTTTCGGGTGCCCCCTGGGTGAGTGAGTAATTCTCAG--------GAAgtcaggaaggcagattctagcctcagacgtctgggttcaaacctccatgttgccacttcccagctctgggacttgaggcaaattgctagtctatttgtagctcagtggcccgatccgtagaatgtggat-----------aataaatagtgtctgcctcat-gggg--ggtcgtgag-aagcaaatgcaa---------------caatgtccacgaagtg-ttagtgcaatcagccttgcatgtTGCTATCGTGA---TATCTGAGAAGTTAAGAGAGGCCAGCTGATGTCAGCG----GAAATCAGGGAAGCCAGAGCTCT-GGAATTATTA-------------------------CAATG-ACGGGGACTCAGATGGGAAAGGGAATGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473325 377 + 17725628 TCACCTCCGG-CTTC------ACTTAAG-CTTTCGGGTGCCCCCTGGGTTCGTGAGtaattc----------------tcaggagggcagattctagcctcagatgtctgggttcgaacctctacgttgccccttcccagccctgggacttgaggcaaattgctggtctacctgtatctccgtggcccgatccatagagtggggat-----------aatacacaggatctgcctcgc-gggt--ggccatgat-aatcaaacgcaa---------------caatgtgcatgaagtg-tgagtgcagtCAGCCTTGGATGCCGTGATCGTGA---TAGTGGAG-----AAGAGAGGCAGGCTGAAGTCAGTG----GAAATCAGGGCAGCCAGAGCTCTGGGAATTATTA-------------------------CAACG-ACGAGGACTGGGATGGGAAAGGGAGTG-T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 437871 369 - 6778120 CCACCACCGC-CTTC------ATTTAAG-CTTTCGGGTGCCCCATGGGTTAGTGAGtaattc----------------ttaggaaggcagattctagcctcagatgtctgggttcaaacctccacgttgccacttcccagctctgggacttgaggcaaattgctagtctacttgtatctcag------------tagaatggggat-----------aataaatagtatctgtctcacagggt--ggtcgtgac-aatcaaatgcaa---------------caatgcacatgaagtg-ttagtgcaatCAGCCTTGGATGTTATTATCGTGA---TATCTGAGACGTTTAGAGCGGCCAGCTGAT---AGTG----GAAATCAGGGAAGCCAGAGCTCTGGTAATTATTG-------------------------CAATG-GCGGAGACTGGGATGGGAAAGGGAATGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 6008 381 + 21398 TCACCACTGG-CTTC------ATTTAAG-CCTTCGGGTGCCCCGGGGGT-AGTGAGAAATTCTCAG--------GAAGTCAGGAA-Gcagattctagcctcagatgcct-ggttcaaacctccatgttgccacttcccagctccgggactttaggccaattgc-agtctatttgcatctcagtgggccaatccgt-gaatg-ggat-----------aataaatagtatctg-ctcat-gggtggggtcgtgataaatcaaatgcaa---------------caatgtgcatgaagcg-ttagtgcaatcagcctTGGGTGTTTTGTTACTGA---TATTTGAGAAGG-TAGAGAGGCCAGCTGATGTCAGTG----GAAATGAGGGAAGCCAGAGCTCTGGGAATTA--A-------------------------CAATG-ACG-GGACT-GGAT-GGAAAGGGAATGGT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25915448 387 - 114275543 TCACCGCTGG-CTCC------ACATAAG-CTGCTGGGTGCCCC-TGGGTAAGTGGGTCATTCTCAG--------GAggtcaggaagacaggttccagcctctgaggtctaggttcaagtccccactttgccacttcctagctctgtgactttag--gaattatgcatctatttgtttcttagtttccttatctgtagaacggggat-----------aataaacagtatctacctcattgggt--ggttgtgat-aatcaaaggaac---------------taatgtacatgaagtacttagcataatcaatcttggcatttatta---CGA---TA-TTGAGAAGTCAAGAGAGGCCAGCTAGTGTTAGTG----GAAACCAGGGAAGTCCAGGCTCTTGGAATTATTG-------------------------CAATGCACAGGGATTGCGATGGGAAAGAGAATGGC i micMur3.chr1 I 195 I 116 s proCoq1.NW_012133858v1 7430203 394 + 22200726 TCGCCACTGG-CTCC------ATATAAG-CTGCCAGGTGCCCC-TGGGTAAGCGGGTCATTCTCAG--------GAGGGCAGGAAGGCAGGTTCCAGCCTCTGAGgtctggattcaagtccccactttgccacttcttagctctgtgactttagacaaattgtttatctatttgtttctctgtttctttatctgtagaatggggat-----------aatagacagtatctacctcatcgggt--ggttgtgat-aatcaaaggaac-----------taattaatgtacaagaagtacttagcgtaatcaatcttggcatgtatta---CAA---TATTTGAGAAGTCAAGAGATGCCAGCTAGTCTTAGTG----GAAACCAGGGAAGTCCAGGCTCTGGGAATTATTG-------------------------CAATGCACAGGGATTGGGATGGGAACGAGAATGGC i proCoq1.NW_012133858v1 C 0 I 96 s otoGar3.GL873829 428734 420 - 608964 TCTCTGCTGG-CTCCGTGTTTATATAAG-CTGCTGGTTGCCTC-TGGGTAAGTGGCTCATTCTCAG--------GAGGTCAGGAAGGGAGGGTCCAGCCTCTGAtatctgggttcaaatccccactttgccacttcctagctctgtgactctaggcaagttgcttaccgatttctttctcagtttccttacctgtagaacggggat-----------aataaatagcatctacctggtagggt--ggttgtgat-aatcaaatgaag---------------taatgtatgtgaagtacctagtgtaatgAAT-GTGGCAGTTACTA---TGG---TATTTGAGAAGTCAAGAGAGGCCAGCTAGCATTGGTG----GAAACCAGGGCAGGCAAGGCTCTGGGAGTTATTACTCAGGTTGAGCTATATGAAATCGCCAATAGCCAGAGGTTGGGATGGGAAAGAGAGTGGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65444739 346 - 98207768 -----------TCCC------ATCTAAC-AACCTGCGT-------------------------------------------GGATCACAAATTCCACtctggagggcctgtgttctgatgcccactttgccactttgaaactctctgactttgggcaaatgactcatctgcttgaacctaggtttccttacctataggataagggttttatctgtaggatagttgtCAACTA--TCGT-TGGT--GGCTGTGAT-CACCAAAGAAAACAAACAGTAAATAAATAATGTATATGTCGTAATAGGTATAATAAG---TGGCTACTAGCT------------------------GAGAAGTCAGCTAATGTCAGTGGAAAGAAACCAAGGAGGTCAAAGGTT---AAAGGACTC-------------------------CGGTACACAAGTGTTGGAATGGGGACAG---TGCC i mm10.chr16 C 0 I 1 s canFam3.chr33 29080406 398 + 31377067 CCCCCACCGGACCCC------GCCCAAGCCCCCCGGGTGCCCC--GGGTCACAGGCTGGTGCTCAGCCC-ACCaggggtcacgaaggcagagcttggcctcaaccggcggggggccagttcctgcttggccacctcc-agctctgggacttggggc-aattccagatccattt-tacctccgctttcttatctgtagaatggg--c-----------agtaaagagtagccccttcat-gggt--ggtggtgat-gattaaatgaaa---------------taatgcatattaagtagttagtgtaataaatggtggctattattattattACAGTACTTGAGAGGTCGAGAGAGGTTAGCTAAGGACAGTA----GAACTCGGGGAAGTCAACGCTCCGGGAATTATTA-------------------------TAAGGCATGAGTACTGGGGTGGGAAAGAGAATGGC i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3906966 380 + 6579706 TCATCACTGA-CTCC------ACATAAA-CTGAGAAGTGCCTC-TGGGTGAGTGGTTAATTCTCAGACTGATTAAAAgtcaggggagcagattctagcctcagatgtctgggctcatatgcctgcttggccatttcctca---------tttgggaaaattacttatctatatgtatcttaatgtccttatttgtaaaatagggat-----------aataaatagtatttatctcctgggac--tattatgat-aatcaaatggaa---------------tagtgcatataaaCTA-GTAATG---------TTGGCTGCTATCATTACAG---TATTTGAGATGTTAAGAGAAGTCAGCTAATGTCAGTG----GAAGTCAGGGAAGTCAAAGCTCTGGCAATTCTTA-------------------------CAATGCACAGGGACTGGGAGAAGACAGAGAATG-- i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M a score=765962.000000 s hg38.chr3_KI270779v1_alt 139325 96 + 205312 GGACAAATGGGTG---ATCTTGTCGTGGGAAGCAGCCAGATGCCTGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT s panTro5.chr3 200132860 96 + 202621043 GGACAAATGGGTG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGTGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104161 96 + 190779 GGACAAATGGGTG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGTGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47048 96 - 55620 GGACAAATGGGTG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGTGGGAGCTGGAGTCAGCGTGAGTCAGAAGCAGCAGCCAGGAGGGTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893871 96 + 123690457 GGACAAATGGATG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGTGGTAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480118 96 + 204787373 GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCCGGCCCCAGGGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAACCAGGAGGGTT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559862 96 + 19675229 GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAACCAGATGCCCGGCCCCAGCGGGAGCTGGAGTCAGTGTGAGTCAGAAGCACCAGCCAGGAGGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499830 96 + 16847902 GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCTGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439290 95 - 91754291 GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCCGG-CCCAGCGGGAGCTGGAGTCAGTGTGAGTCAGAAGCACCAGCCAGGAGGGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606135 96 - 1977891 GGACAAATGGGTG---TTCTTGTCGTGGGAAACAGCCAGATGCCTGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 469394 96 + 7796314 GGACAGATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCTGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950250 69 - 74750902 GGACAAATGGGTG---ATCTTTTCATGTGAAGCAGC---------------------------AGCCAGAGTGAGTCAGAAGCATCAGCCAGGTGGGTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473702 87 + 17725628 GGACAAATGGGTG---ATCTTTTCATGTGAAGCAGCCAGATGCCCGGCCCCAGTGGGAGCTGGCGCCCGTGTGAGTCGGAAGCATCAGCC--------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438240 87 - 6778120 GGACAAATGGGTG---ATCTTTTCATGTGAAGCAGCCAGATGCCTGGCCCCAGTGGGAGCTGGAGCCAGTGTGAGTCAGAAGCATCAGCC--------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 6389 78 + 21398 GGACAAAT-GGTG---ACTTTTTCATGTGAAGCAGCCAGATGCCTGGC-----------------CCAGTGTGAGTCAGAAGCATCAGCCAGAGAGGGT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 429154 86 - 608964 ------AGGGG-------CTTTTCATCTGAAATGGCAAGACATGTGGCCCCGGCAGGAACTTGAGCAGGTGTGAGTCAGAATCAGCAGCAAGGATGATA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65445086 45 - 98207768 GGATGAGTGGGGG---GGTT--TCATCAGGAAGAGCTACATATTC----------------------------------AAGGA--------------- i mm10.chr16 I 1 C 0 s canFam3.chr33 29080804 85 + 31377067 ---CCAGTGGATGGGTATCTTTTCATTTGAAACAGCAAGA-----------AGGGGGGATTGGAGCAGGCGTGGGTCAGAAACGTCAATAAGAAGGATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3907346 57 + 6579706 -----------------------------AAAGAGCAAGACATGTGGTTTCAGTGGGAACAGGAGTCAGTGTGAGTCACTGGCATT------------- i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7430597 96 + 22200726 I e micMur3.chr1 25915835 116 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=68669.000000 s hg38.chr3_KI270779v1_alt 139421 16 + 205312 CCCGCCTTGCCCCAGG s panTro5.chr3 200132956 16 + 202621043 CCCGCCTTGCCCCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104257 16 + 190779 CCCGCCTTGCCCCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47144 16 - 55620 CCCGCCTTGCCCCAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893967 16 + 123690457 CACGCCTTGCCCCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480214 15 + 204787373 CACATCTCGCC-CAGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559958 15 + 19675229 CACATCTTGCC-CAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499926 16 + 16847902 CACATCTTGCCTCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439385 16 - 91754291 CACATCTTGCCCCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606231 16 - 1977891 CACATCTTGCCCCAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 469490 16 + 7796314 CCCATCTTGCCCCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950319 15 - 74750902 TATGCCCGGCC-CAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473789 2 + 17725628 --------------GG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438327 2 - 6778120 --------------AG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 6467 15 + 21398 TCACGCCTGCC-CAGG i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7430693 16 + 22200726 GGCGCCTTGTCCCAGG i proCoq1.NW_012133858v1 I 96 I 1 s otoGar3.GL873829 429240 16 - 608964 GGTGCCTTGTTTCCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65445131 4 - 98207768 ------------CGGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29080889 16 + 31377067 CATACCCTGTCCCGGG i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3907403 16 + 6579706 CAAGCCTTGTGCTTGA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25915835 116 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=1348196.000000 s hg38.chr3_KI270779v1_alt 139437 110 + 205312 ATGGGA----GTGTGTGTGCAGCG-AAAGCCGACTCT-ACA-CCCCTCCCTGCCAACTGCTCAGTGCTGAC----AGCCCCTC---CC-ATCCTACCTAGAGAAGCCC--ATGAGCACCGGGTTGCC s panTro5.chr3 200132972 110 + 202621043 ATGGGA----GTGTGTGTGCAGCG-AAAGCCGACTCT-ACA-CCCCTCCCTGCCAACTGCTCAGTGCTGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACCGGGTTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104273 110 + 190779 ATGGGA----GTGTGTGTGCAGCG-AAAGCCGACTCT-ACA-CCCCTCCCTGCCAACTGCTCAGTGCTGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACCGGGTTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47160 110 - 55620 ATGGGA----GTGTGTGTGCAGCG-AAAGCCGACTCT-ACA-CCCCTCCCTGCCATCTGCTCAGTGCTGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACCGGGTTGCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120893983 110 + 123690457 ATGGGA----GTGTGTGTGCAGCG-AAACCTGACTCT-ACA-CCCCTCCCTGCCATCTACTCAGTGCTGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACCAGGTTGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480229 109 + 204787373 GTGGGA----GCGTGTGTGCAGTG-AAACCCCACTCT-GCA--CCCTCCCTGCCATCTGCTCAGTGCTGAC----AACCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACGAGGTTGCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 559973 109 + 19675229 GTGGGA----GTGTGTGTGCAGTG-AAACCCCACTCT-GCA--CCCTCCCTGCCATCTGCTCAGTGCTGAC----AACCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACGAGGTTGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 499942 109 + 16847902 GTGGGA----GCGTGTGTGCAGTG-AAACCCCACTCT-GCA--CCCTCCCTGCCATCTGCTCAGTGCTGAC----AACCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACGAGGTTGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439401 109 - 91754291 GTGGGA----GCGTGTGTGCAGTG-AAACCCCACTCT-GCA--CCCTACCTGCCATCTGCTCAGTGCTGAC----AACCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACGAGGTTGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606247 109 - 1977891 GTGGGA----GTGTGTGTGCAGTG-AAACCCCACTCT-GCA--CCCTCCCTGCCATCTGCTCAGTGCTGAC----AACCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACGAGGTTGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 469506 111 + 7796314 GTGGGG----GC--GTGTGCAGTG-AAACCCCACTCT-GCA-CCCCTCCCGGCCATCTGCTCAGTGCTGAC----AACCCCCCCCACC-ATCCTACCTGGAGAAGCCC--ATGAGCACGAGGTTGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950334 109 - 74750902 ATGGGC----ATGTGTGTGCAGTG-AAACCCCGCTCT-GCA--CCCCTCTTGCCATCTGCTCAGTGCGGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACCGGGCTGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473791 106 + 17725628 GAGGGA----GTGTGTGTGCAGTG-AGACCC--CTCG-GCA---CCCTCCTGACATCCGCTCAGCGCGGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCC--GTGAGCACCGGGCTGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438329 107 - 6778120 GAGGGA----ATGTGTGTGCAGTG-AAACCGCGCTCG-GCA--CCCCTCCTGCCATC-GCTCAGTGCAGAC----AGCCCC-C---CC-ATCCTACCTGGAGAAGCCC--ATGAGCACCGGGCTGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 6482 108 + 21398 ATGGGA------GTGTGTGCAGTG-AAACCC-GCTCT-GCA--CCCCTCCTGCCATCTGCTTAGTGCGGAC----AGCCCCTC---CC-ATCCTACCTGGAGAAGCCCTGATGAGCACTGGGCTGCC i aotNan1.NW_018492867v1 C 0 I 7 s micMur3.chr1 25915951 110 - 114275543 ACAGAA----GTGCATGTGTAGCG-AAAGCCCACTCT-GCC-CCTCTTCCTGCCATCTGCTCGGCACCGAC----AGTCCCTC---TC-TTCTCACCTGGAGAAGCCC--ATGAGGACGGAGGTGCC i micMur3.chr1 I 116 C 0 s proCoq1.NW_012133858v1 7430710 110 + 22200726 ATGGGA----GTGCGTGTGCAGCG-AAAGCCCACTCT-GCC-CCTCTTCCTGCCATCTGCTTGGCACTGAC----AGCCCCTC---TC-TTCCCACCTGGAGAAGCCC--ATGAGGACGGAGGTGCC i proCoq1.NW_012133858v1 I 1 C 0 s otoGar3.GL873829 429256 105 - 608964 ACAGGA----ATGTGTGAGCCAGG-ACA-CCTGCTCC-GCC-TCTCTCCCTGCCA---GCTCAGTGAGGAC----A-CCCCTC---CC-TTCCTACCTGGAGAAGCCC--ATGAGGACTGGGTTGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65445135 98 - 98207768 ATAGGA------GTGTGAGCAGGGCACACTTAGCTCTCGCA-----------------GTCCAGTGCTGACGGCAAGCCCATC---CC-GTCTTACCTGGAGAAGCCC--ATGAGCACCCGGTTGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29080907 117 + 31377067 ATGGGAGGAGGTGTGTGTGCCTCAAAAACCTGACCCT-GCCACCACCTCCCATTACGTGCTCAGCGCTGGC----CGTCCATC---CCTGTCCTACCTGGAGAAGCCC--ATGAGCACCGGGTTGCC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3907419 109 + 6579706 ATGTGG----G-GTGGGTTCCGTGAAAACCCTGCTCT-GCA--CACGTCTTATTATCTGGTCGGTATTGAC----AGCCCTTC---CC-GTTCTACCTGGAGAAGCCC--ATGAGGACGGAGTTTTC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M a score=112233.000000 s hg38.chr3_KI270779v1_alt 139547 9 + 205312 TGAGCGCTG s panTro5.chr3 200133082 9 + 202621043 TGAGCGCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104383 9 + 190779 TGAGCGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47270 9 - 55620 TGAGCGCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894093 9 + 123690457 TGAGCGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480338 9 + 204787373 TGAGCGCTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560082 9 + 19675229 TGAGCGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500051 9 + 16847902 TGAGCGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439510 9 - 91754291 TGAGCGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606356 9 - 1977891 TGAGCGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 469617 9 + 7796314 TGAGCGCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950443 9 - 74750902 TGCGTGCCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473897 9 + 17725628 TGCCTGCCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438436 9 - 6778120 TGCGTGCCG i cebCap1.NW_016107444v1 C 0 C 0 s micMur3.chr1 25916061 9 - 114275543 TAAGCGCTG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7430820 9 + 22200726 TGGGCGCTG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 429361 9 - 608964 CGGGCGCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65445233 9 - 98207768 TGGTTCCTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29081024 9 + 31377067 TGGGCGCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3907528 9 + 6579706 TGGGCGCTT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018492867v1 6590 7 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M a score=5432521.000000 s hg38.chr3_KI270779v1_alt 139556 411 + 205312 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCTCTGACAC--GCACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGACAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGCGAA-----CGCACTT-------------------------------------AC-CACGGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTAGATGAGTGTTTGTTAGAGAAAGCTACC-------AGAACCT--GAGATCAG s panTro5.chr3 200133091 411 + 202621043 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGC-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCTCTGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------AC-CACGGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTAGATGAGTGTTTGTTAGAGAAAGCTACC-------AGAACCT--GAGATCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104392 411 + 190779 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGC-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCTCTGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------AC-CACGGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTAGATGAGTGTTTGTTAGAGAAAGCTACC-------AGAACCT--GAGATCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47279 411 - 55620 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGGGCGTGGAAGC-AAACACAGGGATGCCCGTGAGAGATCCGGTGTCTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCTCTGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------AC-CACGGTGAATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGCGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTAGATGAGTGTTTGTTAGAGAAAGCTACC-------AGAACCT--GAGATCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894102 453 + 123690457 GGCCACGTCCCACTGCATTCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCATCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGC-AAACACAGGGATGCCTGTGAGAGATCCGGGGTCTCCTCTCTT-ATGTCCCCCCACCCATCCCACAGCCCTGCTTGGACAT--GTACAGCAG-CTGTTCCTAGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTGTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAACTTACCACACTTACCCTGGGTGTGAACTTTTCACCCTGGGTGTGAATCCAC-CACGGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTACATCAGTGTTTGTAAGAGAACGCTACC-------AGAACCT--GAGATTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480347 413 + 204787373 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CACACTT-------------------------------------AC-CACAGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAAGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTGCAGGAGAAAGCTACC-------AGAACCTGAGAGATCAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560091 414 + 19675229 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTTAATGTCCACCCGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CATACTT-------------------------------------AC-CACAGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAAGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTGTAAGAGAAAGCTACC-------AGAACCTGAGAGATCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500060 413 + 16847902 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATACGGGGTTTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CACACTT-------------------------------------AC-CACGATGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAAGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTGTAAGAGAAAGCTacc-------agaacctgagagatgag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439519 413 - 91754291 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCATCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTTTCCTCTCTT-ATGTCCCCCTGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCGT-GGGCCCAAAATGCTGGCATGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------AC-CATGGTGGATTTGCC-TT-TCAGTGACT------TTCTTCTG-GGAAGGGA-GATAAAGGGTTCTGGGTTCTAATT---CAGTTAGATGAGTGTTTGCAAGAGAAAGCTACC-------AGAACCTGAGAGATTAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606365 413 - 1977891 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTAGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTTTCCTCTCTT-ATGTCCCCCCGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCAC-CTGTTCCTGGTCTGCCCACAGC---AAAGGCAT-GGGCCCAAAATGCTGGCAAGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CACACTT-------------------------------------AC-CACGGTGGATTTGCC-TT-TTGGTGACT------TTCTTCCA-GGAAGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTCTAAGAGAAAGCTACC-------AGAACCTGAGAGATTAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 469626 413 + 7796314 GGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGGAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACAGAGGGATGCCCGTGAGAGATCTGGGGTCTCCTCTCTT-ATGTCCccccgcccgtcccacagccctgccctgacat--gcacagcac-ctgttcctggtctgcccACAGC---AAAGGCAT-GAGCCCAAAATGCTGGCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------AC-CACGGTGGATTTGCC-TT-CTGGTGACT------TTCTTCCA-GGAAGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTGCAAGAGAAAGCTACC-------AGGACCTGAGAGATTAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950452 402 - 74750902 GGCCGCGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTTCCGTCCGTGGAGAGGATGGCCTGGTAGGTGTTGGTCTGGG----------AGC-AAACACAGGGATGCCGGTGAGTGA-CCGGGGTCTCCTCTCTT-ACGTCCTCCCACCCGTCCCACAGCGCTGCTCTGACGT--GCACATCAC-CTGTTCCAGGTCTGCCCACAGC---AAAGGCATGGGCCCCAAAAGGCGGGCAAGTTTCTGGTCAGCTAGGGCAGC-ATCACCCT--GGGTGGGAA-----AGCACTT-------------------------------------AC-CACGGTGTATTTGCC-TT-TTTGTGACT------ATCTTCCA-GGAGGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATAAGTCTTTATAAGAGGAAGCTACC-------AGAACCTGATCGCTGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 473906 410 + 17725628 GGCCGCGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGACAGCCTGGTAGGTGTTGGTCTGGGGGTGGGTGGAAGC-AAACACAGGG-TGCCCGTGAGTGAGCGGGGGTCTCCTCTCTT-CCGTCCTCCCACCCATCCCACAGCCCTGCTTTGACGT--GCACATCAC-CTGTTCT-GGTCTGCCCACAGC---AAAGGCATGGGCCCCAAAAGGCTGGCAAGTTTCAGGTCAGTTCGGGCAGC-TTCCGCCT---GGTATGAA-----AGCACTT-------------------------------------AC-CACCGTGTATTTGCC-TT-TTTGTGACT------GTCTTCCA-GGAGGGGA-GATAAAGGGTTCTGGGTTGTAATT---CAGTTAGATAAGTGTTTGTAAGGGAAAGGTACC-------AGCACCTGAGAGCTGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438445 410 - 6778120 GGCCGCGTCCCACTGCATCCCACCACTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGCACAGCCTGGTAGGTGTTGGTCTGGGGGTGGGTGGGAGC-AAACACAGG--TGCCCGTGAGTGAGCGGGGGTCTCCTCTCTT-ACGTCCTCCCACCCGTCCCACAGCCCTGCTTTGACGT--GCGCATCAC-CTGTTCCTGGTCTGCCCACGGC---AAAGGCATGGGCCCCAAAAGGCTGGCAAGTTTTGGGTCGGTTAGGGCAGC-GTCACCCT--GGGTGTGAA-----AGCACTT-------------------------------------AC-CACGGTGTATTTGCC-TT-TTTGTGACT------ATCCTCCA--GAGGGGA-GATAAAGCGTTCTGGGTTATCATT---CAGTTGGATCAGTGTTTGTAAGAGAAAGCTGCC-------AGAACCCGAGAGCTGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 6597 403 + 21398 GGCCGCGTCCCACTGCATCCCACCGCTC-GGTAGA-AAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCCTGGTAGGTGTTGG-CTGGGGGTGGGTGGAAGC-AAACACAGGGATGTCCATGAGTGA-CCGGGGTCTCCTCTCTT-ATGTCCTCCCACCCGTCCCGCAGCCCCACTTTGATGT--GCACATCACTCTGTCCC-AGCCTGCCCCAGCA---AAAGGCAT-GGCCCCAAAAGGCTGGC-AGTTTTGGGTCAGTTAGGGCAGC-TTCACCCT--GGGTGTGAA-----AGCACTT-------------------------------------AC-CACCGTGTATTTGCC-TT-TTTGTGACT------ATCTTCGG--GAGGGGA-GATAAAGG--TTAGGGTTATAATT---CAGTTAGATAAGTGTTTGTAAGAGAAAGCTA-C-------AGAACCTGAGAGCTGAG i aotNan1.NW_018492867v1 I 7 C 0 s micMur3.chr1 25916070 414 - 114275543 GGTCACATCCCATCGCATCCCGCCGCTCTGGTAGAGGAACAGGGCGTAGGACCTGCTTCCATCCGTGGAGAGGATGGCCTGGTAGGTGTTGGTCTGGGGGTGGGTGGGAGACAAACACAGG-ATGCCTGTGAGAGATCTGGGGTCTCCTCCCTC-ACGTACCGTCACCTGGCCCACACCCCTGCCCCAACAC--ACACATCAC-CTGTTGCTGGGCTGTGCAGAGC---AAAGGCAT-GGGCCTAAAATGCTGGCAAGTTTGGGATCAGTTCGGGCAGCTTTCCTCCC---TTTGGCAA-----AGCACTT-------------------------------------AC-CATGGGGGACTTGCCTTT-TTTGTGACTC-----TTTTCCCA-GGAGGGGA-GATAAAGGGCTCTGGGTTATAATC---CAACCAGAAGAGGGTTTGTTAGAGAAAGCTACA-------GGAACCTGAGAGATTAG i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7430829 418 + 22200726 GGTCACGTCCCACTGCATACTGCCACTCTGGTAGAGGAACAGGGTGTAGGACCTGCTCCCATCCGTGGAGAGGATGGCCTGGTAGGTGCTGGTCTGGGGGTGGGTAGGAGACGAACACAGG-ATGCCTGTGAGAGACCTGGGGTCTCCTCCCTC-ACGTCCCCCCGCCTGTCCCACACGCCTGTCCCAACAC--ACACATCAC-CTATTCCTGGGCTGTGCAGAGCCTAAAATGCAT-GGGCCTAAAATGCTGGCAAGTTTGGGATCGGTTCAGGCAGCTTTCCTCCT--GGGTGGCAA-----AGCACTT-------------------------------------AC-TATGGGGGACTTGCCTTT-TTTGTGACTC-----TTTTCCCA-GGAGGGGA-GATAAAGGGCTCCAGGTTACAATC---CAATCAGAAGAGGGTTTGTTAGAGAAAGCTACA-------GGAACCTGAGAGATTAG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 429370 400 - 608964 GGTTGAGTCCCACTGCATACCACCGCTCTGGTAGAGGAACAGGGCGTAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGGTCT-GGGGTGGGGAGGAGATGAACA-AAG-ATGCTTGTGAGAGATCTGGGGTCTCCTCTCTC-ATCTCCC-CCACTTGTCCCACACCCCTGCCCCAACAC--ACACATCAC-CTGTTTCTGGGCTGGGCAGAGC---AAAGGCAT-GTGCCTAAAATGCTGGCAAGTCTGGGGTCAGTTAGGGCACCTGTCACCCT--GGTTGTCAA-----AGCACTC-------------------------------------ACTCATGGTGGATTTGCC-TT-TTTGTGACTC----TTTTTCCCA-GGAGGGGA-GATAAAGAGTTCTGGGTTGTAATC---CAATCAGAAGAGGGTT-------------TATA-------GGAGCCTGAGAGATCAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65445242 402 - 98207768 GGTCACATCCCACCTCATGCCACTGTTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCATCTGTGGAGAGGATGGCTTGGTAGGTATTGGTCTGGAAGTTGGGGAGAGACAAACA----GATGTCATTGAGAGATCTGAGGTTTCCTCCCTG-GTGTC----------TCCCACACCTCTGAGCAGACACAGGGACGTCAC-CTATTCCTGGTC------CATC----------T-GGGCTGCACCTGCT-GCGTGCTTGCTGT-GATTAGAGTAACACTTACCCT--GGGTGCAGA-----AGATCTT-------------------------------------AG-CATGCCCTATTTTCC-TTCCTTGTAACTTTTTTTTTTTTCAG-GGAGAGGA-AATAAAGGGCTGTGGGTTggggctggagagatggctgagtggttaagagcactgactgctcttccaaaggtcct--gagttcaa i mm10.chr16 C 0 I 538 s canFam3.chr33 29081033 393 + 31377067 GGTCACATCCCACTGCATGCCGCCGCTCTGATAAAGAAACAGGGCGTAGGACCTGCTGCCGTCTGTGGAGAGGATGGCCTGGTAGGTGCTGGTCTGGAGGTTTGTTGAAGACAAACACAGGGATGCCTGTGAGCGATCTGGGGTCTCCTCCCCA-ATGTCCCATCACCCTCCCCACAACCCTGCCCCGATAC--ACACATCCT-CTTTCCCTAGCCTACTCAGAGC---AAA--------------------------CTTGGGATTGTGCAGGGCAGCTTTCCCCCCCGGGCTGTCAA-----AGCGTCT-------------------------------------AC-CGTGGTGGACCTGCCTTT-TTTGTGACT------TCTGTCCA-GGAAGGGGTGATAAAGCGTTCTGGTTTAGGATC---CAGTCAGAAGAGAGTTTGTGTGAGAAAGCCTCA-------GGACTCAGAAAGATTAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3907537 396 + 6579706 GGTCACGTCCCACTGCATACCACCACTTTGGTAGAGAAACAGGGCGTAGGACCTGCTCCCGTCCGTGGACAGGATGGCCTGGAAGGTGTTGGTCTAGGGATGGG---AAGACAAGCATAGGGTTGCCTGTGAGAGATCTGGGGTCTCCTCCCTG-AGGTCCCACCACCTACCCCACACCCCTGCCCCAACAC--ACACATCCC-TTGTTCCTAACCTATCCAGAGC---AAAGACA--GGGCTTTAAATGCTGGCAA-TTTGGGATTGTGTAGGGCAGCTTTTACCCT--TGCTGTCAA-----AGCACCT-------------------------------------AA-CATGGTGGATTTGCC-TTCCTCGTGACT------TATTTCCAGGGAGGAGA-GGTAAAGGGCCCTGG-TAACAATG---GAATTAGA------------AGAGGAAGTTAAa-------ggaaaca--gagattaa i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M a score=238065.000000 s hg38.chr3_KI270779v1_alt 139967 15 + 205312 CCAAGATACCAGAGA s panTro5.chr3 200133502 15 + 202621043 CCAAGATACCAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104803 15 + 190779 CCAAGATACCAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47690 15 - 55620 CCGAGATACCAGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894555 15 + 123690457 CCAAGATACCAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480760 15 + 204787373 CCAAGATACCAGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560505 15 + 19675229 CCAAGATACCAGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500473 15 + 16847902 ccaagataccagaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439932 15 - 91754291 CCAAGATACCAGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606778 15 - 1977891 CCAAGATACCAGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470039 15 + 7796314 CCAAGACACCGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950854 15 - 74750902 CCAAGATACCAGAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474316 15 + 17725628 CCAAGATACCAGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438855 15 - 6778120 CCAAGATACCAGAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7000 15 + 21398 CCAAGATACCAGAGA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25916484 15 - 114275543 CCAAGACACCAGAGA i micMur3.chr1 C 0 I 635 s proCoq1.NW_012133858v1 7431247 15 + 22200726 CCAAGACACCAGAGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 429770 15 - 608964 CCAGGACACCAGAGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29081426 15 + 31377067 CCACGACCCCAGAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3907933 15 + 6579706 tcaggacacaagaga i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65445644 538 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M a score=694096.000000 s hg38.chr3_KI270779v1_alt 139982 67 + 205312 GCTAGAGAGGAGGCTTCATTAGCTCCCGCGCGGATATT--TAAGGACATTGCCCAAATTGTCTCCTCCA s panTro5.chr3 200133517 67 + 202621043 GCTAGAGAGGAGGCTTCATTAGCTCCCGCGCGGATATT--TAAGGACATTGCCCAAATTGTCTCCTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104818 67 + 190779 GCTAGAGAGGAGGCTTCATTAGCTCCCGCGCGGATATT--TAAGGACATTGCCCAAATTGTCTCCTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47705 67 - 55620 GCTAGAGAGGAGGCTTCATTAGCTCCCGCGCGGATATT--TAAGGACATTGCCCAAATTGTCTCCTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894570 66 + 123690457 GCTAGAGAGGAGGC-TCATTAGCTCCCTTGCGGATAGT--TAAGGACATTGCCCAAATTGTCTCCTCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480775 67 + 204787373 GCTAGAGAGGAGGCTTTGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560520 67 + 19675229 GCTAGAGAGGAGGCTTTGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500488 67 + 16847902 gctagagaGGAGGCTTTGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 439947 67 - 91754291 GCTAGAGAGGAGGCTTCGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606793 67 - 1977891 GCTAGAGAGGAGGCTTCGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTTCAAATTGTCCCCTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470054 67 + 7796314 GCTAGAGAGGAGGCTTCGTTAGCTCCCTCGCGGGTATT--TAAGGACATTGTCCAAATTGTCCTCTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950869 67 - 74750902 GCTCGAGAGGGGACTTAATTAGCTGCCTGGGGGACATT--TAAGGACATTGCCCAAATTGTCCCCTCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474331 67 + 17725628 GCTCGAGAGGGGACTTAATCAGCTCCCTGGGAGATATT--TAAGGACATGGCCCAAATTGTCCCCTCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 438870 67 - 6778120 GCCCGAGAGGGGACTTAATTAGCTCCCTGGGGGATATT--TAAGGACATTGCCCAAATTGTCCCCTCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7015 65 + 21398 GCTCGAGA-GGGACTTAATTAGCTCCCTGGGGGATAGT--TAAGAACACTGCCCAAATTGTCCCCT-CA i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7431262 64 + 22200726 ---CAGGGAGAGGCTTAATTAGCTCCCTTGGGGACATT--TAAGGACATCGTCCAAATTGTCGCCTCCA i proCoq1.NW_012133858v1 C 0 I 385 s otoGar3.GL873829 429785 44 - 608964 -----TGGAGAGGCTTAATTAGCTCCCCTGGGGATATT--TGAGGACACGG------------------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29081441 66 + 31377067 -GCCGAGA-GAGGCCTACTTAGCTTCCTCTGGGATATTTGTAAGGACATTGTTCAAA-TGTCCCCTCAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3907948 63 + 6579706 gct-gaga-gaggctaaattagcttcctcagggaga-t--taaagacattgtccaAA-TGAACCCTCAA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25916499 635 - 114275543 I e mm10.chr16 65445644 538 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M a score=199739.000000 s hg38.chr3_KI270779v1_alt 140049 19 + 205312 TCTAAACAGCATG-GATGAC s panTro5.chr3 200133584 19 + 202621043 TCTAAACAGCATG-GATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104885 19 + 190779 TCTAAACAGCATG-GATGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47772 19 - 55620 TCTAAACAGCATG-GATGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894636 19 + 123690457 CCTGAACAGCATG-GATGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480842 19 + 204787373 CCTGAACAGCATG-GATGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560587 19 + 19675229 CCTGAACAGCATG-GATGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500555 19 + 16847902 CCTGAACAGCATG-GATGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440014 19 - 91754291 CCTGAACAGCATG-GATGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606860 19 - 1977891 CCTGAACAGCATG-GATGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470121 19 + 7796314 CCTGAACAGCATG-GATGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950936 19 - 74750902 CCTGAACAGCATG-GATGAC i calJac3.chr17 C 0 I 13 s saiBol1.JH378146 474398 19 + 17725628 CCTGAACAGCGTG-GATGAC i saiBol1.JH378146 C 0 I 13 s cebCap1.NW_016107444v1 438937 19 - 6778120 CCTGAACAGCATG-GATGAC i cebCap1.NW_016107444v1 C 0 I 13 s aotNan1.NW_018492867v1 7080 19 + 21398 CCTGAACAGCATG-GATGAC i aotNan1.NW_018492867v1 C 0 I 25 s otoGar3.GL873829 429829 11 - 608964 --------AGGCA-GGTGAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29081507 19 + 31377067 CCTAAATATCGTG-GATGGA i canFam3.chr33 C 0 I 13 s dasNov3.JH569502 3908011 20 + 6579706 CCTGAATAGCGTGTGAGGAC i dasNov3.JH569502 C 0 I 15 e proCoq1.NW_012133858v1 7431326 385 + 22200726 I e micMur3.chr1 25916499 635 - 114275543 I e mm10.chr16 65445644 538 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M a score=883668.000000 s hg38.chr3_KI270779v1_alt 140068 99 + 205312 ACTGG-GGTTCACTGAAGGC--------------------GCAc---ac-----------gttgtccacagtaggtgaccagtgaacttttgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCATAAG s panTro5.chr3 200133603 99 + 202621043 ACTGG-GGTTCACTGAAGGC--------------------GCAc---ac-----------gttgtccacagtaggtgaccagtgaacttttgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCATAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 104904 99 + 190779 ACTGG-GGTTCACTGAAGGC--------------------GCAc---ac-----------gttgtccacagtaggtgaccagtgaacttttgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCATAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47791 99 - 55620 ACTGG-GGTTCACTGAAGGC--------------------GCAc---ac-----------gttgtccacagtaggtgaccagtgaacttttgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCATAAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894655 99 + 123690457 ACTGG-GGTTCACTGAAGGC--------------------GCAC---AC-----------GTTGTCcacagtaggtgaccagtgagctttcgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCGTAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480861 99 + 204787373 ACTGG-GGTTCACTGAAGGT--------------------GCAC---AC-----------GTTGTCCACGGTAGGTGACTAGTGAACTTTTGTCAAGTGAATGAAGAAatgagtgactttagatcagacataag i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560606 99 + 19675229 ACTGG-GGTTCACTGAAGGT--------------------GCAC---AC-----------GTTGTCCACGGTAGGTGACTAGTGAACTTTTGTCAAGTGAATGAAGAAatgagtgactttagatcaggcataag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500574 99 + 16847902 ACTGG-GGTTCGCTGAAGGC--------------------GCAC---AC-----------GTTGTCCATGGTAGGTGACCAGTGAACTTTTGTCAAGTGAATGAAGAAATGAGTGACTTTAGACCAGGCATAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440033 99 - 91754291 ACTGG-GGTTCGCTGAAGGC--------------------GCAC---AC-----------GTTGTCCGTGGTAGGTGACCCGTGAACTTTTGTCAGGTGAATGAAGAAatgagtgactttagatcaggcataag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606879 99 - 1977891 ACTGG-GGTTCGCTGAAGGC--------------------GCAC---AC-----------GTTGTCcatggtaggtgaccagtgaacttttgtcaagtgaatgaaGAAATGCGTGACtttagatcagacataag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470140 99 + 7796314 ACTGG-GGTTCACTGAAGGC--------------------GCAC---AC-----------GGTGTTcacggtaggtgaccagtgaacttttgttgagtgaatgaaGCAATGAGTGACTTTAGATGGGGCATAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 950968 99 - 74750902 ACTGG-GGTTTGCTGAAGGC--------------------ACAC---GC-----------CTTGTCCGCCGGAGGTGACCGGTGAACTTCTGTTGAGTGAATGAAGAAatgagtgactttaggccaggcatgag i calJac3.chr17 I 13 C 0 s saiBol1.JH378146 474430 95 + 17725628 ACTGG-GGTTTGCTGAAGgc--------------------acac---gc-----------cttgtccacaggaggtgaccagtgaacttttgttgag----tgaagaaatGAGTGACTTTAGACCAGGCATGAG i saiBol1.JH378146 I 13 C 0 s cebCap1.NW_016107444v1 438969 99 - 6778120 ACTGG-GGTTTGCTGAAGgc--------------------acac---gc-----------cttgtccactggaggtgaccagtgaacttttgttgagtgaatgaaGAAATGAGCAACTTTAGACCAGGTATGAG i cebCap1.NW_016107444v1 I 13 C 0 s otoGar3.GL873829 429840 97 - 608964 ACTGGAGGTTCTCCCAAGGC--------------------ACAT---GC-----------CTT-TTGAAAATAGGTCATCAATGGACTTCTGTTGCGTGAAGGAAGGAATGAGTGG-TATAGACCAGACACAG- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29081539 109 + 31377067 CCTGGAGGCTCTCTGAAGGC--------------------AGAT---GCCAAGCACTGTGCTTGTACAAAGTAGGAAACCAATGAACTT--GTTGAACCAATGAGGAAACGAGTGACTTTAGACCACACACAGG i canFam3.chr33 I 13 C 0 s dasNov3.JH569502 3908046 122 + 6579706 atgga-ggttctctgaaggcaggacccaactaggtgccaagcactctgc-----------tttgtacagagtaggtcatcaatgaatctctgttgaacaaatgaagcaatgaataacttcagactagacgtgag i dasNov3.JH569502 I 15 C 0 e proCoq1.NW_012133858v1 7431326 385 + 22200726 I e micMur3.chr1 25916499 635 - 114275543 I e mm10.chr16 65445644 538 - 98207768 I e aotNan1.NW_018492867v1 7099 25 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M a score=549053.000000 s hg38.chr3_KI270779v1_alt 140167 52 + 205312 GAAGAACTTGGTGACTACAAGAGC--GGGGTCCTCGGAGGGAGGACAGAGGAGA s panTro5.chr3 200133702 52 + 202621043 GAAGAACTTGGTGACTACAAGAGC--GGGGTCCTCGGAGGGAGGACAGAGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105003 52 + 190779 GAAGAACTTGGTGACTACAAGAGC--GGGGTCCTCGGAGGGAGGACAGAGGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47890 52 - 55620 GAAGAACTTGGTGACTACAAGAGC--GGGGTCCTTGGAGGGAGGACAGAGGAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894754 52 + 123690457 GAAGAACTTGGTGACTACAAGAGC--GGGGTCCTCGGAGGGAGGACAGAGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202480960 51 + 204787373 gaagaacttggtgactacaagagC---GGGTCCTCGGAGGGAGGACAGAGGAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560705 51 + 19675229 gaagaacttggtgactacaagagt---GGGTCCTCGGAGGGAGGACAGAGGAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500673 51 + 16847902 GAAGAACTTGGTGACTACAAGAGC---GGGTCCTCGGACGGAGGACAGAGGAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440132 51 - 91754291 gaagaacttggtgactacaagagC---GGGTCCTCGGAGGGAGGACAGGGGAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 606978 51 - 1977891 gaagaacttggtgactacaagagC---GGGTCCTCGGAGGGAGGACAGAGGAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470239 51 + 7796314 GAAGAACTTGGTGACTATAAGAGT---GGGTCCTCGGAGGGAGGACAGGGGAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951067 52 - 74750902 gaagaactttgtgactacaagagc--GGGGTCCGCAGAGGGAGGACAGAGGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474525 52 + 17725628 GAAGAACTTTGTGACTACAAGAGC--GGGGTCCTGAGAGGGAGGACAGAGGAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439068 52 - 6778120 GAAGAACCTTGTGACTCCAAGAGT--GGGGTCCTCAGAGGGAGGACAGAGGAGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7124 52 + 21398 GAAGAACTTTGTGACTACAAGAGC--GGGGTCCTCAGAGGGAGGACAGAGGAGA i aotNan1.NW_018492867v1 I 25 I 210 s otoGar3.GL873829 429937 54 - 608964 GAAGAACTTTGTGACTGTAAGACCTTTGAGTCCTCAGAGGAAAGGCTTAGGAGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29081648 40 + 31377067 ------------GGCTGTAAGAGC--GGAGTCCCCGGGCGGAAGACTGAGGACA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3908168 54 + 6579706 gaagaacttcctcactgtgggagctctgagtccccagagggaatactagagaga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7431326 385 + 22200726 I e micMur3.chr1 25916499 635 - 114275543 I e mm10.chr16 65445644 538 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M a score=1432428.000000 s hg38.chr3_KI270779v1_alt 140219 175 + 205312 TGGTGTGGCGCACCCTGTGCC--CGTTGGATGAGCCTgtgcttcagagccagaggctggagtcagaagaagctccact-caggcctggctttgccatttgccagtggcgtgactctgaacgagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggag----cataata s panTro5.chr3 200133754 175 + 202621043 TGGTGTGGTGCACCCTGTGCC--CGCTGGATGAGCCTGTGCTTaagagccagaggctggagtcagaagaagctccact-caggcctggctttgccatttgccagcggcgtgactctgaacaagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggag----cataata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105055 175 + 190779 TGGTGTGGTGCACCCTGTGCC--CGCTGGATGAGCCTGTGCTTaagagccagaggctggagtcagaagaagctccact-caggcctggctttgccatttgccagcggcgtgactctgaacaagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggag----cataata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 47942 175 - 55620 TGGTGTGGTGCACCCTGTGCC--CGTTGGATGAGACTGTGCTTaagagccagaggctggagtcagaagaagctccact-caggcctggctttgccatttgccagcggcatgactctgaacaagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggag----cataata i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894806 176 + 123690457 CAGTGTGGTGTGCCCCGTGCC--CACTGGATGAGCCTGTGCTTaagagccagaggctggagtcagaagaagctccactgcaggcctggctttgccatttgccagcagcgtgactttgaacaagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggat----cataata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481011 175 + 204787373 TGGTGTGGTGTGCCCCATGCC--CGTTGGATGAGCCCATGCTTAATGGCCAGAGGCtggagtcagaagaagctccactgcaggcctggcgttgccatttg-cagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggat----cagaata i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560756 175 + 19675229 TGGTGTGGTGTGCCCCATGCC--CGTTGGATGAGCCCgtgcttaatggccagaggctggagtcagaagaagctccactgcaggcctggcgttgccatttg-cagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggat----cagaata i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500724 175 + 16847902 TGGTGTGGTGTGCCCCATGCC--CGTTGGATGAGCCCgtgcttaatggccagaggctggagtcagaagaagctccgctgcaggcctggcgttgccatttg-cagtggcgtgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggat----cagaata i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440183 175 - 91754291 TGGTGTGCTGTGCCCCATGCC--CATTGGATGAGCCCGTGCTTAACGGCC-GAGGCtggagtcagaagaagctccactgcaggcctggcgttgccattttccagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggat----cagaata i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607029 175 - 1977891 TGGTGTGGTGTGCCCCATGCC--CGTTGGATGAGCCCGTGCTTAATGGCCAGAGGCtggagtcagaagaagctccgctgcaggcctggcgttgccatttg-cagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggat----cagaata i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470290 176 + 7796314 TGGTGTGGTGTGCCCCATGCC--CATTGGATGAGCCTgtgcttaacggccagaggctggagtcagaagaagctccgctgcaggcctggcgttgccctttgccagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcgtctgtaaagtgtggat----cacaata i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951119 171 - 74750902 GGGCGCCAGGAGCCCCATGTCAAAactgaatggctttgtgcttaagagccagaggctggagtcagaagaacctccactgcaggcctggctctgccatct----gcttcgtgac--tgagcaagttat-taatctctctgaccacggtcggcctccaccctataatgtggat----aagaatc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474577 175 + 17725628 GGGCGCCATGAGCCCCATGTCAAAGTTGAATGGCCTTGTGCTTaagagccagaggctggagtcagaagagcctccacgccaggcctggcatagccatttgccggcttcgtgac--tgagcaagttac-taatctctctaaccaccatctgcctcatccctaaaatgtggat----aataata i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439120 174 - 6778120 GGGCGCCATGAGCCCCATGTCAAAactgaatggccttgtgcttaagagccagaggctgcagtcagaagaacctccactccaggcctggctttgccatttgta-gcttcgtgac--tgagcaagctac-taatctctctaaccattgtctgcctcatccctaaaatgtggat----aataata i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 429991 179 - 608964 TTGTGTGGTGTGCCCCATTCC--CACCGGGAGGCACCATGGTTaaaagccagagcttagagtca-aaaaccctccatttcaggcctggctttgtcacttgctaggggggtgaccttgaacaagttgtttatcctccctaaccgttgtcttcctcattgctaaaatgcagatgctaTTTAATA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29081688 174 + 31377067 CTGTGTGCTGTGACC-ATGGC--CACTGGCTGGCTTtgcagctgagagctggagttggaagtcagaa-agcctccattccaagcctggctttgtcactttctagctgggtgaccttgagcagattgtctaacctctctcaccgtcatcctcctcatctctaaaacgtggat----aataata i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3908222 176 + 6579706 ttgtggGGTGTGTCCCATTTC--CATTGGATGACACTGTGATTaagagccagagtttggagtcagaaaaacctctgttccaaacctggctttgtcatttgctagctgggggaccttcagtaagttgcctaccctctctaaccgtcaccttcctcttctctaaaatgtggat----actaata i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7431326 385 + 22200726 I e micMur3.chr1 25916499 635 - 114275543 I e mm10.chr16 65445644 538 - 98207768 I e aotNan1.NW_018492867v1 7176 210 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M a score=68210.000000 s hg38.chr3_KI270779v1_alt 140394 9 + 205312 ccagactga s panTro5.chr3 200133929 9 + 202621043 ccagactga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105230 9 + 190779 ccagactga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48117 9 - 55620 ccagactga i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894982 9 + 123690457 ccagattga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481186 9 + 204787373 cccagttga i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560931 9 + 19675229 cctAgttga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500899 9 + 16847902 ccCAgttga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440358 9 - 91754291 cccagttga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607204 9 - 1977891 cccagttga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470466 9 + 7796314 ccCAgttga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951290 9 - 74750902 ccagattga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474752 9 + 17725628 ccagatgga i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439294 9 - 6778120 ccagattga i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 430170 9 - 608964 tcagattga i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446182 9 - 98207768 CTCGTGTAA i mm10.chr16 I 538 C 0 s canFam3.chr33 29081862 9 + 31377067 tcAGGTTGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3908398 9 + 6579706 tcagactga i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7431326 385 + 22200726 I e micMur3.chr1 25916499 635 - 114275543 I e aotNan1.NW_018492867v1 7176 210 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M a score=80912.000000 s hg38.chr3_KI270779v1_alt 140403 7 + 205312 gccacgt s panTro5.chr3 200133938 7 + 202621043 gccacgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105239 7 + 190779 gccacgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48126 7 - 55620 gccacat i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894991 7 + 123690457 gccacat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481195 7 + 204787373 gccacat i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560940 7 + 19675229 gccacat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500908 7 + 16847902 gccacat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440367 7 - 91754291 gccacat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607213 7 - 1977891 gccacat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470475 7 + 7796314 gtcacag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951299 7 - 74750902 gccacgt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474761 7 + 17725628 gccacat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439303 7 - 6778120 gccacgt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7386 7 + 21398 Gccacat i aotNan1.NW_018492867v1 I 210 C 0 s otoGar3.GL873829 430179 7 - 608964 gctatat i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446191 7 - 98207768 GGCATAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29081871 7 + 31377067 GCCATCT i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3908407 7 + 6579706 accatat i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7431326 385 + 22200726 I e micMur3.chr1 25916499 635 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=1791216.000000 s hg38.chr3_KI270779v1_alt 140410 209 + 205312 gaaattgtga---atagccagacatttttgacttacaaaaatgccacttgctatgtttcagcctaataata-cccggtttgctgggctgctgtgaggtcaagtaggcaaagggccgagacaggccgggcccacggtgagtgctcagccaacagtggT----------------GGCAGTGGGG-GGGTGGCGGT--------GGGGGGGCTTGCTATAATTAGCAA-TCTTTCCTAGAG s panTro5.chr3 200133945 225 + 202621043 gaaattgtga---atagccagacatttttgacttacaaaaatgccacttgctatgtttcagcctaataata-cccggtttgctgggctgctgtgaggtcaagtaggcaaagggccgagacaggccgggcccacagtgagtgctcagccaacagtggTGGCAGTggtgggggggggcagtgggg-gggtggcggt--------gggggggCTTGCTATAATTAGCAA-TCTTTCCTAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105246 225 + 190779 gaaattgtga---atagccagacatttttgacttacaaaaatgccacttgctatgattcagcctaataata-cccggtttgctgggctgctgtgaggtcaagtaggcaaagggccgagacaggccgggcccacagtgagtgctcagccaacagtggTGGCAGTgggggcggggggcagtgggg-gggtggcggt--------gggggggCTTGCTATAATTAGCAA-TCTTTCCTAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48133 209 - 55620 gaaattgtga---atagccagacatttttgacttacaaaaatgccacttgctatgtttcagcctaataata-cccgacttgctgggctgctgtgaggtcaagtaggcaaagggccgagacaggccgggcccacggtgagtgctcagccaacagtggT----------------GGCAGTGGGG-GGGTGGCAGT--------GGGGGGACTTGCTATAATTAGCAA-TCTTTCCTAGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120894998 190 + 123690457 gaaattgcga---atagccagacatttttgacttacaaaaattccacttgctatgtttcagcctaataata-cccagtttgctgggctgcagtgaggtcaagtaggcaaagggccgaggcaggccgggcccacggtgagtgctcagccaacagtggT----------------GGCAGTGG----------------------------CTTGCTGTAATTAGCAA-TCTTTCCTAGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481202 206 + 204787373 gaaattccca---acagccagacatttttgacttacaaaaatgccacttgctatgtttcaacctaataata-tctggtttgctgggctgcagtgaggtcaagtaggcaaagggctgaggccggccaggcccacagtgagtgctcCGCCAGCAGTGGG----------------AGCAGC--GG-GGGTGGCAGT--------GGGTGGGC-TGCTATAATTAGCAA-TCTTTCCTAGAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 560947 206 + 19675229 gaaattccca---atagccagacatttttgacttacaaaaatgccacttgctatgtttcaacctaaTAATA-TCTGGTTTGCTGGGCTGCAGTGAGGTCAAGTAGGCAAAGGGCTGAGGCCGGCCGGGCCCACAGTGAGTGCTCCGCCAGCAGTGGG----------------AGCAGC--GG-GGGTGGCAGT--------GGGTGGGC-TGCTATAATTAGCAA-TCTTTCCTAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 500915 207 + 16847902 gaaattccca---atagccagacatttttgacttacaaaaatgccacttgctatgtttcaacctaaTGATA-TCTGGTTTGCTGGGCTGTGGTGAGGTCAAGTAGGCAAAGGGCTGAGGCCGGCCGGGCCCACAGTGAGTGCTCCGCCAGCAGTGGG----------------AGCAGC-GGG-GGGTGGCAGT--------GGGTGGGC-TGCTGTAATTAGCAA-TCTTTCCTAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440374 207 - 91754291 gaaattccca---atagccagacatttttgacttacaaaaacgccacttgctatgtttcaacctaataata-tccagtttgc--------ggtgaggtcaagcaggtaaagggctgaggcgggccgggcccacagcgagtgctcCGCCAGCAGTGGG----------------AGCAGC-GGC-GGGTGGCAGTGGGTCAGCGGGTGGGC-TGTTGTAATTAGCAA-TCTTTCCTAGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607220 207 - 1977891 gaaattccca---atagccagacatttttgacttacaaaaatgccacttgctaggtttcaacctaatgata-tctggtttgctgggctgtggtgaggtcaagtaggcaaagggctgaggccggccgggcccacagtgagtgctcTGCCAGCAGTGGG----------------AGCAGC-GGG-GGGTGGCAGT--------GGGTGGGC-TGCTATAATTAGCAA-TCTTTCCTAGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470482 208 + 7796314 gaaattccca---atagccagacatttttgacttacaaaaatgccacttgctatgtttcgacctaataata-cccggtttgctgggctgctgtgaggtcaagtaggcaaagggctgaggcaggccgggcccacagtgagtgctcagccaacagtggG----------------AGCAGC-TGG-GGGTGGCAGT--------GGGTGGGCTTGCTATAATTAGCAA-TCTTTCCTAGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951306 191 - 74750902 gaaattgcca---atagccagacatttttgacttacagaaatgccacctactgtgtttcaacctaatgaca-cctggtttgctga--------gaggtcaaataggCAAAGGGCCGAGGCAGG------CCACGGTGAGTGCTCGGCCAACAGTGGT----------------GGCGGTAAGCAGGGTG-------------GGGTGGGCTTGCTGTAATTAGCAG-TCTTTCCTAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474768 173 + 17725628 gaaactgccg---atagccagacatttttgacttacagaaatgccacttgctatgtttcaacctaataaca-cctggtttgctgg--------gagg-caaataggcaaagggcc---------------------aagtgctcagccaacagcgGT-----------------GCAGTGGGC-GGGTG-------------GGGCGGGCTTGCTATGACTAGCAA-TCTTTCCTGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439310 190 - 6778120 gaaattgcca---atagccagacatttttgacttgcagaaatgccacttgctatgtttcaacctaaTAACA-CCTGGTTTGCTGG--------GAGGTCAAATAGGCAAAGGGCCGAGGCAGG------CCACGGTGAGAGCTCAGCCAACGGTGGT----------------GGCAGTGGGC-GGGTG-------------GACTGGGCTTGCTATGGTCAGCAA-TCTTTCCTGGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7393 191 + 21398 gaaattgcca---atagccagacatttttgacttacagaaaggccacttgctatgtttcaacctaaTAACA-CCTGGTTTGCTGG--------GAGGTCAAATAGGCAAAGGGCCGAGGCCGG------CCACGGTGAGTGCTCAGCCAACAGCGGT----------------GGCAGTGGGCGGGGTG-------------GGGCGGGCTTGCTATAATTAGCAA-TCTTTCCTGGAG i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7431711 187 + 22200726 gaaattgcca---atagtcagatatttctgacttacaaaaatgccatatcctatgtttcaacctaaCaata-cctagtttgctgggctgctacaaggtcaagtaagtgaacagctgaggcaggcctggcccatggtgagtgctcagcaaacggtggc----------------AGCGGCAGGG-------------------G-------TTGCCATAACCAGCAA-TGGTTCC----- i proCoq1.NW_012133858v1 I 385 C 0 s otoGar3.GL873829 430186 185 - 608964 gaaatcgcca---atagccagacatttctgacttacagaaatgccatttcctgtgtttcagcctaaCAATA-CCTGGTTTGGTGGGCTGCTGTGAGGTCAGGCAAGTGAATGGCTGAAGCAGGCC-------TGGTGAGGGCCCACCCAATGGGGGT----------------AGTGGCAGGG-------------------G-------TTGCTGTAATCAGCAG-TGGTTCCTAGAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446198 135 - 98207768 GAAGTCGTCA---GTCACCAGACATTCTTGCCT---GTAAACGCAGCTGT---TGTTTC---------------------------------TGACGT-----------------AAGGCAGGCCTGGCCCACTGTGGGCACTCAGTAGACCATGCT----------------CTC----GAG-------------------GGA------TACTATAAGCAGCAATTTTTTTCTCCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29081880 110 + 31377067 AAAATGGCCGGCTACTGGCAGCCACTTCTGACTTACAAAAATTCCATTTCCTATGTTTTAAACCAGTGA-------GTAT----------------------------------------------------CGGTGAGTGCTCAGCAAACAGGGTG-----------------------GGG-GGGAGGCAG---------------------------------------------- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3908414 189 + 6579706 ggaattgcta---atagtcaaccatttttgacctacaaaaattctgttctctatgtttcaacctaataatagtctcctgcgctggactgccgtaagataatgtaagtgaggggctgaggcaggtctggcctgtgggacgtgctcagcaaacagtggT---------------------------------------------GGTGGTGTTTACT-CAGTCGGCAG-TCCTTTCTTGGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25916499 635 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=4063601.000000 s hg38.chr3_KI270779v1_alt 140619 277 + 205312 CCAGAGAGGATTTTGGAAGAGTGGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATAGCT-CCTGGGAGCTGCCCAGGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGCCCACCTGGCCTTGTAGCCCCCGTTGTTTGTCATCTTTCTAATCCAAGACTCGGCCTGCTGGACTAGCAGGCTGTGTTCACCATAGAACGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAAAACAAG s panTro5.chr3 200134170 277 + 202621043 CCAGAGAGGATTTTGGAAGAGTGGCCCCTGCCTAGGATTCCAGGATGTCTGACTCCCAGATAGCT-CCTGGGAGCTGCCTAGGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGCCCCCGTTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTCCTGGACTAGCAGGTTGTGTTCACCATAGAACGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105471 277 + 190779 CCAGAGAGGATTTTGGAAGAGTGGCCCCTGCCTAGGATTCCAGGATGTCTGACTCCCAGATAGCT-CCTGGGAGCTGCCTAGGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGCCCCCGTTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTCCTGGACTAGCAGGCTGTGTTCACCATAGAACGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48342 276 - 55620 CCAGAGAGGATTTTGGAAGAGTGGCCCCTGCCTAGGATTCTAGGATGTCTGACT-CCAGATAGCT-CCTGGGAGCTGCCCACGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGCCCCCGTTGTTTGCGATCTTTCTAATCCAAGACTCGGCCTCCTGGACTAGCAGGCTGTGTTCACCATAGAACGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895188 277 + 123690457 CCAGAGAGGATGTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATGGCT-CCCAGGAGCTGCCCACGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGAGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGCCCCTGTTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTCCTGGACTAGCAGGCTGTGTCCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481408 278 + 204787373 CCAGAGAGGATTTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTAACCCCCAGATGGCTCCCTGGGAGCTGCCCACGGG-----------------TCTACTCACCCCAAGGGTCCACTGGGCAGGATAAGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCGGTCTGCAGGACTGGCAGCCTGCGTTCACCATAGAGCGTCTTGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561153 278 + 19675229 CCAGAGAGGATTTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACCCCCAGATGGCTCCCTGGGAGCTGCCCACGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAAGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCAGTCTGCAGGACTGGCAGCCTGCGTTCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501122 278 + 16847902 CCAGAGAGGATTTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGGTGTCTGACTCCCAGATGGCTCCCTGGGAGCTGCCCACGGG-----------------TCTACTCACCCCAAGGGTCCACTGGGCAGGATAAGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTGCAGGACTGGCAGCCTGCGTTCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAAGAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440581 278 - 91754291 CCAGAGAGGATTTTGGACGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATGGCTCCCTGGGAGCTGCCCACGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTGCAGGACTGGCAGGCTGCGTTCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607427 278 - 1977891 CCAGAGAGGATTTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATGGCTCCCTGGGAGCTGCCCACGGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTGCAGGACTGGCAGCCTGCGTTCACCGTAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470690 278 + 7796314 CCAGAGAGGATGTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATGGCTCCCTGGGAGCTGCCCACCGG-----------------TCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATCGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCACCATTGTTTGTGATCTTTCTAATCCAAGACTCCACCTGCAGGACTGGCAGGCTGTGTTCACCATAGAGTGTCTCGTATGCCTAGGAAAGGAGGGCAGATGAGAACAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951497 278 - 74750902 CCAGAGAGGGCTTCGGAAGAGTAGCCTCTGCCTAGAATTTGAGGATGTCTGACTCCCAGATGGTTCCCAGGGAGCTGTCCACGGA-----------------TCTACTCACCCCGAGGCTCCACTGGGCAGGATAGGCGTGGGCACTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGTCCCCGTTGTTTGTAATCTTTCTAATCCAAGACTCAGCCTGCAGGACTAGTGGGTTGTGTTCACCGTAGAGCGTCTCATATTCCTTGGAAAGGAGAGCAGATGAGAACAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 474941 278 + 17725628 CAGGAGCGGGCCTTGGAAGAGTAGCCCCTGCCTAGGATTGGAGGCTGTCTGAGTCCCAGATGGCTCCCAGGGAGCTGTCCATGGG-----------------CCCACTCACCCCGAGGCTCCACTGGGCAGGATAGGCATGGGCGCCGACCCACGTGACCTTTAGGGTCCACCTGGCCTCATAGTCCCCGTTGCTTGTGATCTTTCTAATCCAAGACTCGGTCTGCAGGACTAGCGGGTTGTGTTCACCGTACAGCGTCTCGTATTCCTGGGAAAGGAGAGTGGATGAGAACAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439500 278 - 6778120 CCAGAGAGGGCTTTGGAAGAGTAGCCCCTGCCTAGAATTCGAGGATGTCTGAGTCCCGGATGGCTCCCAGGGAGCTGTCCACGGG-----------------TCGACTCACCCCGAGGCTCCACTGCGCAGGATAGGCATGGGCACCGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGTGCCCGTTGTTTGTGATCTTTCTAATCCAAGACTCGGTCTGCAGGACTAGCGGGCTGGCTTCACCGTAGAGCGTCTCGTATTCCTGGGAAAGGAGAGCAGATGAGAACAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7584 278 + 21398 CCAGAGAGGGCTTTGGAAGAGCAGCCCCTGCCTAGAATTCGCGGATGTCTGACTCCCAGATGGCTCCCAGGGAGCTGTCCGCGGG-----------------TCTACTCACCCCGAGGCTCCACTGGGCAGGATAGGCGTGGGCACTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGTCCCCGTTGTTTGTCATCTTTCTAATCCAGGACTCGGCCTGCAGGACTAGCAGGTTGTGTTCACCGTACAGCGTCTCGTATTCCTAGGAAAGGAGAGCAGATGAGAACAAG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917134 295 - 114275543 CCAGAGAGGATTGTAGAAGAGTAGCCCCTGCCTAGGACTCTAGAATGTCTGACTCCCAGATGGCTCATGGGGAGCTGTCTGTGGGTCCACTCACCCCAAGGATCCACTCACCCCGAAGGTCCACTTGGCGGGGTAGGCGGGGGCATTGACCCACGTGACCTTCAGGGTCCACCTGGCTTTGTAGTCCTTGGAGTTTGTGAACTTTTTAATCAAAGACTCCACCTGCCGGACTAGTGGGTGATATTCACCATAGAGTGTCACGTATTCCTAGGAAAGGAAGGCAGATAAGAACAAG i micMur3.chr1 I 635 C 0 s proCoq1.NW_012133858v1 7431898 276 + 22200726 --GGAGAGGCTTTTAGAAGAGTAGCCCCTGCCCAGGATTCTGGGATGTCTGACTCCCAGATGGCTCACAGGGAGCTGTCCGTGGG-----------------TCCACTCACCCTGAAGGTCCAATCTGCGGGGTAGGCGGGGGCATTAACCCACGTGACCTTCAGGGTCCACCTGGCTTTGTAGTCCCAGGAGTTTGTGAACTTATTAATCAAAGACTCCACCTGCTGGACTAGTGGGTAATGTTCATCATAGAGTGTCACATATTCCTAGGAAAGGAAGGCAGATAAGAACAAG i proCoq1.NW_012133858v1 C 0 I 143 s otoGar3.GL873829 430371 276 - 608964 TCAGAGAGGATTTTAGAAGAGTAGACCCTGCCTAGGATTCTAGAATGCATGAGTCCCAGCCAGCTCA--GGGAGCTGTCCATGGG-----------------TCCACTCACCCCGAAGGTCCACTTGGCAGGATAGGCAGGGGCATTGACCCATGTGACCTTCAAGGTCCACCTGGCTTTGTAGTGCCAGGTGTTTGTGAACTTTTTAATCCAAGACTCCACCTGCAGAACTAGTGGGTTATATCCGTCATAGAGTGTCTCATATTCCTAGGAAAGGAAGGCAGGCAAGAACAAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446333 276 - 98207768 CCAGGGTGG-TCTTGAAAAGATAGCTCCCACATAGGATAATGGTATGTTCGACTCCCAAAAGGGC-CACAGGAGCCGTTCCATGA-----------------TCCACTCACCCCAAAGCTCTCTTGGGCAGTATAGGCAGGAACATTGACCCAGGTGACCTTCAGTGTCCACTTGGCTCTGTAGCCCCAGCTACTTGTGAAATCATTAATCAAAGTCTCCACTTCCCGGATTAGCTGATGGTGTTCATTGTAAAATGTGACATATTCCTAGGAAAGGAAGGTAGGTAAGAACAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29081990 256 + 31377067 --------------GGAA-------CCCTGCCTAGGGTTCCAGGACGTATGACTTCCAGATGGTTCGCAGGGAGTTGTCCTTTGG-----------------TCCACTCACCCCGAAGGTCCGCCCGGCAGGATAGGCAGGGGCATTGACCCAGGTGACCTTTAGGGTCCACTCGGCTTTGTAGTTCCTGGTGTCAGTGAATTTATTAATCCAAGACTCCACCTGCTGGACTAGCAGGTTGTGTTCACGATAGAGCGTGTCATATTCCTGGGAAAGGAAGGCAGA-GAAGGCAAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3908603 266 + 6579706 CCAGAGAGGATTGTAGAAGAGTGACCCCTGCTGGGGATTCTAGGCTGACTGACTTCCGGATAG------------TGCCCATTGG-----------------TCCACTTACCCCCAAGGTCCTGTGGGCGGGATAGGCAGGGGCGTCGGCCCACGTAATCTTTAGGGTCCACCTGGCTTTGTAGTACCAGGCGTTTGTGAACTTTTTAATCCAAGACTCCACCTGCTGCACTAGCGGGTGGTGGTCATTATGAAGAGTCTCATATTCCTAAGAAAGGAAGACAGGTAAGGGCAAG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M a score=176859.000000 s hg38.chr3_KI270779v1_alt 140896 13 + 205312 CCAACGAGGGTCC s panTro5.chr3 200134447 13 + 202621043 CCAACGAGGGTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105748 13 + 190779 CCAACGAGGGTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48618 13 - 55620 CCAACGAGGGTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895465 13 + 123690457 CCAACGAGGGTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481686 13 + 204787373 CCAACGAGGGTCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561431 13 + 19675229 CCAACGAGGGTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501400 13 + 16847902 CCAACGAGGGTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440859 13 - 91754291 CCAACGAGGGTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607705 13 - 1977891 CCAACGAGAGTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470968 13 + 7796314 CCAACGAGGGTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951775 13 - 74750902 CCAACGAGGGTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475219 13 + 17725628 CCAGCGAGGGTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439778 13 - 6778120 CCAACGAGGGTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7862 13 + 21398 CCCACGAGGGTCC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917429 13 - 114275543 GAAATGAGGGTCC i micMur3.chr1 C 0 I 72 s otoGar3.GL873829 430647 13 - 608964 GAAATGAGGGCCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446609 13 - 98207768 GAAGTGAGGGTCC i mm10.chr16 C 0 I 177 s canFam3.chr33 29082246 13 + 31377067 CAAATGAGGGTCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3908869 13 + 6579706 GGAATGGGAGCCT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7432174 143 + 22200726 I e macFas5.chr2 83084 14732 + 192460366 M a score=49761.000000 s hg38.chr3_KI270779v1_alt 140909 3 + 205312 CAC s panTro5.chr3 200134460 3 + 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105761 3 + 190779 CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48631 3 - 55620 CAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895478 3 + 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481699 3 + 204787373 CAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561444 3 + 19675229 CAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501413 3 + 16847902 CAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440872 3 - 91754291 CAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607718 3 - 1977891 CAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470981 3 + 7796314 CAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951788 3 - 74750902 CAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475232 3 + 17725628 CAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439791 3 - 6778120 CAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7875 3 + 21398 CAC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430660 3 - 608964 CAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446799 3 - 98207768 cac i mm10.chr16 I 177 C 0 s canFam3.chr33 29082259 3 + 31377067 CAC i canFam3.chr33 C 0 I 5 s dasNov3.JH569502 3908882 3 + 6579706 CAC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7432174 143 + 22200726 I e micMur3.chr1 25917442 72 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=466360.000000 s hg38.chr3_KI270779v1_alt 140912 73 + 205312 TC-CTACAC----ATGGG-----------------------------------------------------CCCCCCACTTTCTGCCTGAGGACCCTGCCCACTTCA--GCCCACCCA-ATGGCCTGCCCTCCC s panTro5.chr3 200134463 75 + 202621043 TC-CTACAC----ATGGA----------------------------------------------------CCCCCCCACTTTCTGCCTGAGGACCCTGCCCACTTTA--GCCCACCCACATGGCCTGCCCTCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105764 75 + 190779 TC-CTACAC----ATGGA----------------------------------------------------CCCCCCCACTTTCTGCCTGAGGACCCTGCCCACTTTA--GCCCACCCACATGGCCTGCCCTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48634 75 - 55620 TC-CTACAC----GTGGA----------------------------------------------------CCCCCCCACTTTCTGCCTGAGGACCCTGCCCACTTTA--GCCCACTCACATGGCCTGCCCTCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895481 73 + 123690457 TC-CTACAC----ATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGACCCTGCCCACTTTA--GCCCACCCACATGGCCTGCCCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481702 58 + 204787373 TC-CCGCAC----ATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCACATGGCCTGCCCTCCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561447 58 + 19675229 TT-CCGCAC----ATGGA------------------------------------------------------CCCCCACTTTCTGCGTGGGGA-----------------CCCACCCACATGGCCTGCCCTCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501416 58 + 16847902 TC-CCGCAC----ATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCACATGGCCTGCCCTCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440875 58 - 91754291 TC-CCGCAC----ATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCGCATGGCCTGCCCTCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607721 58 - 1977891 TC-CCGCAC----ATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCACATGGCCTGCCCTCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 470984 73 + 7796314 TT-GCGCAC----ATGGA-----------------------------------------------------CCCCCCACTTTCTGTCTGGGGACCCTGCCCACTTTA--GCCCACCCACATGGCCTGCCCT-CC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951791 70 - 74750902 TC-CCACCC----ATGGA------------------------------------------------------CTT---CCTTCTGCCTGGGGATCCTGCCCACTTTA--GCCCACCCACATGGCCTACCCTCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475235 72 + 17725628 TC-CCA-CC----ATGGG------------------------------------------------------CTCCTGCCTTCGGCCTGGGGATCCTGCCCACTTTA--GCCCACCCACGTGGCCTTCCCTCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439794 73 - 6778120 TC-CCACCC----ATGGG------------------------------------------------------CTCCCTCTTTCTGCCTGGGGATCCTGCCCACATTG--GCCCACCCACATGGCCTTCCCTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7878 73 + 21398 TC-CCACCC----AGGGA------------------------------------------------------CTCCCTCTTTCTGCCTGGGGATCCTGCCCACTTTA--GCCCTCCCACATGGCCTACCCTCCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430663 78 - 608964 TCACCACCC----CTGAG--------------------------------------------------GGACGCCCCACTTTCTGCTTGGGGATCCTGCTCACTTTA--GTCCACCCACGTTAACCATCCCTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446802 122 - 98207768 ta-caacac----aaggaaccatattaaaggctcacagcattagcaggattgaaaattgctgCCCTAAGGGGTCCCCGCTTCCTTCATGGGGATGCTTATCACTTCGTTGCCCAT-------GTCTACCGGTAC i mm10.chr16 C 0 I 4 s dasNov3.JH569502 3908885 77 + 6579706 CT-CAATACCCCAACAGA------------------------------------------------------GCCCCACATTATGCACGGTGATCCCCCTCACCTCA--GTCTACCCACGCTGCACATCATTCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7432174 143 + 22200726 I e micMur3.chr1 25917442 72 - 114275543 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=495261.000000 s hg38.chr3_KI270779v1_alt 140985 49 + 205312 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTTTTCTGAGGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- s panTro5.chr3 200134538 49 + 202621043 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGAGGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105839 49 + 190779 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGAGGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48709 48 - 55620 C-GTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGAGGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895554 49 + 123690457 CTGTCCCAGGCCTGCATTTTTGCCATGACCTCTTCTGAGGTGAAGTGCA--------------------------------------------------------------------------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481760 49 + 204787373 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561505 49 + 19675229 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501474 49 + 16847902 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440933 49 - 91754291 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607779 49 - 1977891 CTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471057 49 + 7796314 CTGTCCCAGGCCTGCGTTTTTGCTGTGAGCTCTTCTGACGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951861 49 - 74750902 CTGTCCCAGGCCTGCGTTTTTACCATGAGCTCTTCTGAAGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475307 49 + 17725628 CTGTCCCAGGCCTGCGTTTTTACCATCAGCTTTTCTGAAGCAAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439867 49 - 6778120 CTGTCCCAGGCCTGCGTTTTTACCATGAGCTCTTCTGAAGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 7951 49 + 21398 CTGTCCCAGGCCTGCATTTGTACCATGAGCTCTTCTGAAGTGAAGTTCA--------------------------------------------------------------------------------------------------------------------------- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917514 49 - 114275543 CTGTCTCAGGCCTGCACTTTTACAATTAGCTCTTCTTATCTGAAGATCA--------------------------------------------------------------------------------------------------------------------------- i micMur3.chr1 I 72 C 0 s otoGar3.GL873829 430741 49 - 608964 TTGTCCCAGCCCTGCGTTTTAACAATTAACTCTTCTGATCTGAAGATGG--------------------------------------------------------------------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446928 46 - 98207768 TTTTCCCAAGTGTGAATTTTTAC---AAACCCTTATGATTTTAAAATCA--------------------------------------------------------------------------------------------------------------------------- i mm10.chr16 I 4 C 0 s dasNov3.JH569502 3908962 172 + 6579706 CTCTCGGAGGCCTGCATTTTCACAATGAGCACCTCTGACCTTAAGATCAGTTCAAGGGAAggggagggagtggagtatatgggaatcctttatatcttttaagtaatatttatgtaaaccaaagctcctttaaaaTTTTTTAAAAATTCGAACTAAAAAAAAAGAAAGATCA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7432174 143 + 22200726 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=454126.000000 s hg38.chr3_KI270779v1_alt 141034 35 + 205312 ATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTG-- s panTro5.chr3 200134587 35 + 202621043 ATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105888 35 + 190779 ATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48757 35 - 55620 ATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTG-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895603 35 + 123690457 ATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481809 35 + 204787373 ATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTGTG-- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561554 35 + 19675229 ATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTGTG-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501523 35 + 16847902 ATTCAAACTCGGGCTGCAGGAAGGCCTGCACTGTG-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 440982 35 - 91754291 ATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTGTG-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607828 35 - 1977891 ATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTATG-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471106 35 + 7796314 ATTCAAACTCAGGCTGCAGGAAGGCCTGCAGTATG-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951910 35 - 74750902 ATTCAAACCTGGGCTGCAGGAAGGCCTGCAGCATG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475356 35 + 17725628 ATTCAAACCTGGGCTGCAGGAAGGCCTGCGGGGTG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439916 35 - 6778120 ATTCAAACCTGGGCTGCAGGAAGGCCTGCAGTGTG-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8000 34 + 21398 GTTCAAACCTGGGCTGCAGGAAGG-CTGCAGTGTG-- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917563 35 - 114275543 ATTCAAATTTGGGCTGCAAGAAAGCCTGCAGTGTG-- i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7432317 35 + 22200726 ATTCAAATTTGGGCTGCAGGAAAACCTGCAGCGTG-- i proCoq1.NW_012133858v1 I 143 I 285 s otoGar3.GL873829 430790 35 - 608964 ATTTGAATTTGGGTTGCAGCAAAGTCTGTGGTGTG-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446974 18 - 98207768 -----------------AGGAGAATCTGGGACATG-- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3909134 36 + 6579706 GTTCAAATTTTGGCTGCAGGGAAGCCTG-GGGGTGTA i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=470728.000000 s hg38.chr3_KI270779v1_alt 141069 51 + 205312 CAGAATGCAGGGTCGTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA s panTro5.chr3 200134622 51 + 202621043 CAGACTGCAGGGTCGTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105923 51 + 190779 CAGACTGCAGGGTCGTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48792 51 - 55620 CAGAATGCAGGGTCGTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895638 51 + 123690457 CAGAATGCAGGGTCGTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481844 51 + 204787373 CAGAATGCAGAGTCCTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561589 51 + 19675229 CAGAATGCAGAGTCCTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501558 51 + 16847902 CAGAATGCAGAGTCCTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441017 51 - 91754291 CAGAATGCAGAGTCCTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607863 51 - 1977891 CAGAATGCAGAGTCCTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471141 51 + 7796314 CAGAATGCAGAGTCCTGGCCCAGACGTCC---------AAGA--------CCTCTGGACTTGAACTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951945 45 - 74750902 TGGGATGCAGGGTCCTGGCCATGACATCC---------AAGA--------CCTCTGGACTTG------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475391 45 + 17725628 CGGGGTGCAGGGTCCTAGCCACGACGTCC---------AAGA--------CCTCTGCACTTG------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 439951 50 - 6778120 CGGGGTGCAGGGTCCTGGCCACGACGTCC---------AAGA--------CCTCTGGACTTG-ACTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8034 51 + 21398 CGGGATGCGGGGCCCTGGCCACTACGTCC---------AAGA--------CCTCTGGACTTGAACTCA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917598 49 - 114275543 --GAATGGAAGATCCTGGCCCAGAAGTCA---------GAGT--------CCTCTGGACTGGAACTCA i micMur3.chr1 C 0 I 232 s otoGar3.GL873829 430825 33 - 608964 --GAAGGGGAGAT-------------------------GAGT--------CCTCTACAGAGGAACTCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65446992 51 - 98207768 TGAACTAGAGGGGCTCTATCCAGAAAGCC---------AAGC--------CTTCTGGAATTGAATTGA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3909170 68 + 6579706 TGGAGTGGAGGGTCTAGGCCCTGAAATCCCCACCAGTGAGGACGTATGCGCCTCTGAACTGGAACATT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=800050.000000 s hg38.chr3_KI270779v1_alt 141120 90 + 205312 AGCA--TCTTAGCTCAAACTGGCCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTTCTTGAGAACAGG s panTro5.chr3 200134673 90 + 202621043 AGCG--TCTTAGCTCAAACTGGTCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTTCTTGAGAACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 105974 90 + 190779 AGCG--TCTTAGCTCAAACTGGTCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTTCTTGAGAACAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48843 90 - 55620 AGCG--TCTTAGCTCAAACTGGCCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTTCTTGAGAACAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895689 92 + 123690457 AGCGTCTCTTAGCTCAAAGTGGCCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTCCTTGAGAACAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481895 92 + 204787373 AGCGTCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTCCTTGAGAACAGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561640 92 + 19675229 AGCGTCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCAGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTCCTTGAGAACAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501609 92 + 16847902 AGCATCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCAGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTCCTTGAGAACAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441068 92 - 91754291 AGCGTCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTCCTTGAGAACAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 607914 92 - 1977891 AGCATCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCAGGCCCACTTTTACCTCCCCATGCCTAATCTG-CAGCTCCTTGAGAACAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471192 92 + 7796314 AGCGTCTCTTAGCTCAAACTGACCCCGAGAGCAAAGCCACTCAGGCCCACTTTTACCTCCCCTTGCCTAATCTG-CAGCTCCTTAAGAGCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 951990 80 - 74750902 ----------AACTCAAACTGTCCCAGAGGGCAGAGCCACTCGGGCCCTCTTTCACCT-CCCATGCCTAATCTG--AGCTGCTTGAGGACAGG i calJac3.chr17 C 0 I 281 s saiBol1.JH378146 475436 80 + 17725628 ----------AGCTCAAACTGTCTCAGAGGGCACAGCCACTCGGGCCCTCCTCTGCCT-CCCGTGCCTAATCTG--AGCTGCCTGAGGACAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440001 90 - 6778120 AGCATCTCTTAGCTCAGACTGTCCCAGAGGGCACAGCCACTCGGGCCCCCTTTCCCCT-CCCATGCCTCATCTG--AGCTGCCTGAGGACAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8085 88 + 21398 AGCGTCTCTTAGCTCAAACTGTCCC--AGGGCACAGCCCCTCGGGCCCTCTTTCACCT-CCCACGCCTAATCTG--AGCTGCTTGAGGACAGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430858 92 - 608964 CACTGCTCCCAGCTCAGACTGGCTCAGACAGGGTAACCAGTGGAGCCCATTTTTGCCT-CCTTTGTCTGCTTTGGTGCCTCCGTGAGGACAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447043 92 - 98207768 TACATCCCTTAGTTTAAAACAGCTTGCATGGTATGACCATTTGTGTCTACTTTTACATTCCCATGTCTAGCTTG-TAACTCCTTAAAGACAGA i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3909238 83 + 6579706 TCCATCCTATTGCTCA---TGAACC-----TCGTAGCCCCTTGTGCACA-TTTTACCTCCCTGAGTTTGACTGG-AGGCTCCTTGAGGACAGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=16373.000000 s hg38.chr3_KI270779v1_alt 141210 2 + 205312 CG s panTro5.chr3 200134763 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106064 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48933 2 - 55620 CA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895781 2 + 123690457 CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481987 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561732 2 + 19675229 CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501701 2 + 16847902 CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441160 2 - 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608006 2 - 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471284 2 + 7796314 CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952351 2 - 74750902 CG i calJac3.chr17 I 281 C 0 s saiBol1.JH378146 475516 2 + 17725628 CG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440091 2 - 6778120 CG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8173 2 + 21398 CA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430950 2 - 608964 CA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447135 2 - 98207768 TG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3909321 2 + 6579706 TG i dasNov3.JH569502 C 0 I 365 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=293089.000000 s hg38.chr3_KI270779v1_alt 141212 35 + 205312 TGAGTCTCTTCCTC-TTGGAGCCTCCACACTGCCCT s panTro5.chr3 200134765 35 + 202621043 TGAGTCTCTTCCTC-TTGGAGCCTCCACACTGCCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106066 35 + 190779 TGAGTCTCTTCCTC-TTGGAGCCTCCACACTTCCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48935 35 - 55620 TGAGTCTCTTCCTC-TTGGAGCCTCCACACTGCCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895783 35 + 123690457 TCAGTCTCTCTCTC-TTGGAGCCTCCACACTGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202481989 35 + 204787373 TGAGACGCTCCCTC-TTGGAGCCTCTACACTGCCGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561734 35 + 19675229 TGAGACTCTCCCTC-TTGGAGCCTCCACACTGCCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501703 35 + 16847902 TGAGACTCTCCCTC-TTGGAGCCTCTACACTGCCGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441162 35 - 91754291 TGAGACTCTCCCTC-TTGGAGCCTCCACACTGCCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608008 35 - 1977891 TGAGACTCTCCCTC-TTGGAGCCTCCACACTGCCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471286 35 + 7796314 TGAGACTCTCCCTG-TTGGAGCCTCCACACTGCCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952353 35 - 74750902 TGGTTCTCTCCATC-TTGGAGCCTTTACACTGCTCT i calJac3.chr17 C 0 I 413 s saiBol1.JH378146 475518 35 + 17725628 CGGTTCTCTCCACC-TCGGAGTCTCTGCACTGCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440093 35 - 6778120 TGGCTCTCTCCGTC-TTGGAGCCTCTGCACTGCCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8175 35 + 21398 CGGTTCTCCCCATC-TCGGAGCCTCTACGCTGCCCT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430952 36 - 608964 TGAGTCTTTGCATCTTTGGAGCCTCTATAGTGCCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447137 36 - 98207768 CAGGTCTGTCCATCTTTGAAACCTAGGTAGAGCTTT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=39915.000000 s hg38.chr3_KI270779v1_alt 141247 4 + 205312 GTCC s panTro5.chr3 200134800 4 + 202621043 GTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106101 4 + 190779 GTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48970 4 - 55620 GTCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895818 4 + 123690457 ATCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482024 4 + 204787373 GTCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561769 4 + 19675229 GTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501738 4 + 16847902 GTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441197 4 - 91754291 GTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608043 4 - 1977891 GTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471321 4 + 7796314 GTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952801 4 - 74750902 GCCC i calJac3.chr17 I 413 C 0 s cebCap1.NW_016107444v1 440128 4 - 6778120 GTCC i cebCap1.NW_016107444v1 C 0 I 56 s aotNan1.NW_018492867v1 8210 4 + 21398 GTCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430988 4 - 608964 GTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447173 4 - 98207768 GTCA i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e saiBol1.JH378146 475553 0 + 17725628 C e macFas5.chr2 83084 14732 + 192460366 M a score=611308.000000 s hg38.chr3_KI270779v1_alt 141251 87 + 205312 GTGGCAGGGGCACGGT-----------------------------CCACACTTCCTGCAGTAGCTTTCATCACAT--TTCCTCTGATTG----GAGTTATTCACCCAGTCCAGGAGCACAGG s panTro5.chr3 200134804 83 + 202621043 GTGGCAGGGGCACGGT-----------------------------CCACACTTCCTGCAGTAGCTTTCATCACGT--TTCCTC----TG----GAGTTATTCACCCAGTCCAGGAGCACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106105 83 + 190779 GTGGCAGGGGCACGGT-----------------------------CCACACTTCCTGCAGTAGCTTTCATCACGT--TTCCTC----TG----GAGTTATTCACCCAGTCCAGGAGCACAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 48974 87 - 55620 GTGGCAGGGGCACGGT-----------------------------CCACACTTCCTGCAGTAGCTTTCATCACGT--TTCCTCTGATTG----GAGTTATTCACCCAGTCCAGGAGCACAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895822 89 + 123690457 GTGGCAGGGGCATGGT-----------------------------CCACACTTCCTGCAGTAGCTTTCATCACATGCTTCCTCTGATTG----GAGTTATTCACCCAGTCCAGGAGCACAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482028 118 + 204787373 ATGGCAGGGGCATGGTCCACACTTCGTCCATGGCAGGCACATGGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTAATTG----GAGTTATTCACCCAGTCCAGGAGCACAGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561773 118 + 19675229 ATGGCAGGGGCACGGTCCACACTTCGTCCATGGCAGGCACATGGCCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTAATTG----GAGTTATCCACCCAGTCCAGGAGCACAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501742 118 + 16847902 ATGGCAGGGGCACGGTCCACACTTGGTCCATGGCAGGCACATGGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTAATTG----GAGTTATTCACCCAGTCCAGGAGCACAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441201 118 - 91754291 ATGGCAGGGGCACGGTCCACACTTCGTCCATGGCAGGCACATGGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTCATTG----GAGTTATTCACCCAGTCCAGGAGCACAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608047 118 - 1977891 ATGGCAGGGGCACAGTCCACACTTCGTCCATGGCAGGCACATGGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTAATTG----GAGTTATTCACCCAGTCCAGGAGCACAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471325 118 + 7796314 ATGGCAGGGGCACGGTCTACACTTCGTCCATGGCAGGCACCTAGTCCACACTTCCTGCAGGAGCTTTCATCACGTGCTTCCTCTAATTG----GAGTTATTCACCCAGTCCAGGAGCACAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952805 89 - 74750902 GTGGCAGGGGCACAGT-----------------------------CCACGCTTGCCACAGTGGCTTTCGTCACAGGCTTCCCCTGCTTG----GCGTTACTAACCCAGTCCAGGAGCCCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475553 74 + 17725628 --------------GT-----------------------------CCACAC-TGCTGCAGCAGCCCTCCTCACAGGCTTCCTCTGATTG----GCGTTATTAACCCAGTCCAGGAGCACAGG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 8214 89 + 21398 GTGGCAGCGGCGCAGT-----------------------------CCACACTTGCCGCAGGAGCTTTCATCACAGGCTTCCTCTGATTG----GCGTGGTTAACCCAGTCCAGGAGCACAGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 430992 88 - 608964 ATTGCAG-GGCACAG------------------------------CTAC---TGCCACAGCAGCTTCCAGGACATGTCTCCACTGGCTGGGATGATTGATTGACCCAGTGCAGCAGCATGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447177 89 - 98207768 GCGGCAGGCACACAAA-----------------------------ATGTATTTGCTATGACAGCCTCTGCTCTGCACGTTCACAGGCTG----GCATTATTAACTTAATTCAGGAGTGTTGG i mm10.chr16 C 0 I 20 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e cebCap1.NW_016107444v1 440132 56 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=113972.000000 s hg38.chr3_KI270779v1_alt 141338 18 + 205312 AC---------------GGGCCCT-CTTGACTCA s panTro5.chr3 200134887 18 + 202621043 AC---------------AGGCCCT-CTTGACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106188 18 + 190779 AC---------------GGGCCCT-CTTGACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49061 18 - 55620 AC---------------GGGCCCT-CTTGACTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895911 18 + 123690457 AC---------------GGGCCCT-CTTGACTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482146 18 + 204787373 AC---------------AGGCCCT-CTTGACTCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561891 18 + 19675229 AC---------------AGGCCCT-CTTGACTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501860 18 + 16847902 AC---------------AGGCCCT-CTTGACTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441319 18 - 91754291 AC---------------AGGCCCT-CTTGACTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608165 18 - 1977891 AC---------------AGGCCCT-CTTGACTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471443 18 + 7796314 AC---------------AGGCCCT-CTTGACTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952894 19 - 74750902 AC---------------AGGCCCTACTGGACTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475627 19 + 17725628 AG---------------GGGCCCTGCCGGACCCC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 8303 19 + 21398 AG---------------GGGCCCTGCTGGACTCC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431080 33 - 608964 GCACGGGGCAGAGGAGGAGGCCTG-TCTGACTCA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e mm10.chr16 65447266 20 - 98207768 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e cebCap1.NW_016107444v1 440132 56 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=14655.000000 s hg38.chr3_KI270779v1_alt 141356 2 + 205312 -CT s panTro5.chr3 200134905 2 + 202621043 -CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106206 2 + 190779 -CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49079 2 - 55620 -CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895929 2 + 123690457 -CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482164 2 + 204787373 -CT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561909 2 + 19675229 -CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501878 2 + 16847902 -CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441337 2 - 91754291 -CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608183 2 - 1977891 -CT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471461 2 + 7796314 -CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952913 2 - 74750902 -CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475646 2 + 17725628 -CT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440188 2 - 6778120 -CT i cebCap1.NW_016107444v1 I 56 C 0 s aotNan1.NW_018492867v1 8322 2 + 21398 -CT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431113 2 - 608964 GC- i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e micMur3.chr1 25917647 232 - 114275543 I e mm10.chr16 65447266 20 - 98207768 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=28123.000000 s hg38.chr3_KI270779v1_alt 141358 3 + 205312 CTT s panTro5.chr3 200134907 3 + 202621043 TTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106208 3 + 190779 TTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49081 3 - 55620 CTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895931 3 + 123690457 CTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482166 3 + 204787373 CTT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561911 3 + 19675229 CTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501880 3 + 16847902 CTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441339 3 - 91754291 CTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608185 3 - 1977891 CTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471463 3 + 7796314 CTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952915 3 - 74750902 CCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475648 3 + 17725628 CCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440190 3 - 6778120 CCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8324 3 + 21398 CCT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917879 3 - 114275543 CTT i micMur3.chr1 I 232 C 0 s otoGar3.GL873829 431115 3 - 608964 CTT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7432352 285 + 22200726 I e mm10.chr16 65447266 20 - 98207768 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=446496.000000 s hg38.chr3_KI270779v1_alt 141361 40 + 205312 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG s panTro5.chr3 200134910 40 + 202621043 GTTAGGATAGACCCCCTGCAGCCTGATTTTACAATCAAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106211 40 + 190779 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49084 40 - 55620 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895934 40 + 123690457 GTTAGGATAGACCCCCTACAGCCTGATTTTATAATCAAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482169 40 + 204787373 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561914 40 + 19675229 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501883 40 + 16847902 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441342 40 - 91754291 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608188 40 - 1977891 GTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471466 40 + 7796314 GTTAGGATAGACCCCCTACAGCCTGATTCTACAATCAAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952918 40 - 74750902 GTTAGGATCAATACCCTGCAGCCTGATTTCACAATCAAAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475651 39 + 17725628 GTTAGGGTCGACA-CCTACAGCCTTATTTTACAATCAAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440193 40 - 6778120 GTTAGGACCGACACCCCGCAGCCTTATTTTACAATCAAAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8327 40 + 21398 GTTAGGATCGACACCCTGCAGCCTTATTTTACAATCAAAT i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917882 40 - 114275543 GTTAGGATAGACCCTCTACGGACTTATTTTAAAAGCAAAT i micMur3.chr1 C 0 C 0 s proCoq1.NW_012133858v1 7432637 40 + 22200726 GTTAGGATAGACCCTTTACAGCCTTGTTTTAAAAGCAAAT i proCoq1.NW_012133858v1 I 285 C 0 s otoGar3.GL873829 431118 40 - 608964 GTTAGGATGGACTCCCTTCTGCCTTATTTTATAGTCAGAT i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65447266 20 - 98207768 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=240712.000000 s hg38.chr3_KI270779v1_alt 141401 23 + 205312 GCTGAATTGTCAGCCCCCATCCC s panTro5.chr3 200134950 23 + 202621043 GCCGAATTGTCAGCCCCTATCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106251 23 + 190779 GCCGAATTGTCAGCCCCTATCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49124 22 - 55620 GCTGAATTGTCAGCCCCTAT-CC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895974 22 + 123690457 GCTGAATTGTCAGCCCCCAT-CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482209 22 + 204787373 GCTGAATTGTCAGCTCCCAT-CC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561954 22 + 19675229 GCTGAATTGTCAGCTCCCAT-CC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501923 22 + 16847902 GCTGAATTGTCAGCTCCCAT-CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441382 22 - 91754291 GCTGAATTGTCAGCTCCCAT-CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608228 22 - 1977891 GCTGAATTGTCAGCTCCCAT-CC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471506 22 + 7796314 GCTGAATTGTCAGCTCCCAT-CC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952958 22 - 74750902 GCTGCACTGTTAGCCCCGAC-CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475690 22 + 17725628 GTTGCACTGTTAGCCCCCAC-CC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440233 22 - 6778120 GCTGCACTGTTAGCCCCCAT-CC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8367 22 + 21398 GCTGCACTGTTAGCCCCCAT-CC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917922 22 - 114275543 GCTGAATTGCCAACCCCTAT-CC i micMur3.chr1 C 0 I 1 s proCoq1.NW_012133858v1 7432677 22 + 22200726 GCTGAATTGCCAACCCCTAT-CC i proCoq1.NW_012133858v1 C 0 I 154 s otoGar3.GL873829 431158 22 - 608964 GCTGAGTTGCCAAACCCTAT-CC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447286 20 - 98207768 GCTGGACT--CAACCTCTGT-CC i mm10.chr16 I 20 C 0 e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=15300.000000 s hg38.chr3_KI270779v1_alt 141424 1 + 205312 C s panTro5.chr3 200134973 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106274 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49146 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895996 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482231 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561976 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501945 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441404 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608250 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471528 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952980 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475712 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440255 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8389 1 + 21398 C i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25917945 1 - 114275543 C i micMur3.chr1 I 1 I 175 s otoGar3.GL873829 431180 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447306 1 - 98207768 C i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=90947.000000 s hg38.chr3_KI270779v1_alt 141425 10 + 205312 CGTCACCTGT s panTro5.chr3 200134974 10 + 202621043 CGTCACCTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106275 10 + 190779 CGTCACCTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49147 10 - 55620 CGTCACCTGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120895997 10 + 123690457 TATCACCTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482232 10 + 204787373 CATCACCTGC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561977 10 + 19675229 CATCACCTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501946 10 + 16847902 CATCACCTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441405 10 - 91754291 CATCACCTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608251 10 - 1977891 CATCACCTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471529 10 + 7796314 CATCACCTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952981 9 - 74750902 -GACACCTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475713 10 + 17725628 TGACAGCTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440256 10 - 6778120 TGACACCTGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8390 10 + 21398 TGACACCTGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431181 10 - 608964 TGTCCCCTGT i otoGar3.GL873829 C 0 I 11 s mm10.chr16 65447307 10 - 98207768 TGTCACCTGC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=58515.000000 s hg38.chr3_KI270779v1_alt 141435 6 + 205312 A-GGTCT s panTro5.chr3 200134984 6 + 202621043 A-GGTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106285 6 + 190779 A-GGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49157 6 - 55620 A-GGTCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896007 6 + 123690457 A-GGTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482242 6 + 204787373 A-GGTCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561987 6 + 19675229 A-GGTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501956 6 + 16847902 A-GGTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441415 6 - 91754291 A-GGTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608261 6 - 1977891 A-GGTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471539 6 + 7796314 A-GGTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 952990 6 - 74750902 A-GGTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475723 6 + 17725628 A-GGTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440266 6 - 6778120 A-GGTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8400 7 + 21398 AGGGTCT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65447317 6 - 98207768 A-AGTCC i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M a score=6552.000000 s hg38.chr3_KI270779v1_alt 141441 3 + 205312 TCT- s panTro5.chr3 200134990 3 + 202621043 TCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106291 3 + 190779 TCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49163 3 - 55620 TCT- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896013 3 + 123690457 TCT- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 441421 3 - 91754291 TCT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608267 3 - 1977891 TCT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471545 3 + 7796314 TCT- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 440272 3 - 6778120 TCT- i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65447323 3 - 98207768 -TTA i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=2552.000000 s hg38.chr3_KI270779v1_alt 141444 1 + 205312 C s panTro5.chr3 200134993 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106294 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49166 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896016 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 441424 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608270 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471548 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 440275 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 I 6 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=5593.000000 s hg38.chr3_KI270779v1_alt 141445 5 + 205312 GTGGC s panTro5.chr3 200134994 5 + 202621043 GTGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106295 5 + 190779 GTGGC i panPan2.chrUn_NW_014024201v1 C 0 T 9 s gorGor5.CYUI01001831v1 49167 5 - 55620 GCGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896017 4 + 123690457 GTGG- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 441425 5 - 91754291 ATGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608271 5 - 1977891 ATGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471549 5 + 7796314 ATGGT i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=21693.000000 s hg38.chr3_KI270779v1_alt 141450 18 + 205312 CGGGTTGGGGTATTCCTG s panTro5.chr3 200134999 18 + 202621043 TGGGTTGGGGTATTCCTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 49172 17 - 55620 CGGGTT-GGGTATTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 441430 18 - 91754291 TGGGTTGGGGTATTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608276 18 - 1977891 TGGGTTGGGGTATTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471554 18 + 7796314 TGGGTTGGGGCATTCCTG i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e panPan2.chrUn_NW_014024201v1 106300 9 + 190779 T e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e nomLeu3.chr11 120896021 0 + 123690457 C a score=4820.000000 s hg38.chr3_KI270779v1_alt 141468 5 + 205312 GTCAG s panTro5.chr3 200135017 5 + 202621043 GTCAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 49189 5 - 55620 GTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 441448 5 - 91754291 GTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608294 5 - 1977891 GTCAG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e panPan2.chrUn_NW_014024201v1 106300 9 + 190779 T e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e nomLeu3.chr11 120896021 0 + 123690457 C a score=34163.000000 s hg38.chr3_KI270779v1_alt 141473 27 + 205312 TCTCGCGGCCGGGTTGGGGTATTCCTG s panTro5.chr3 200135022 27 + 202621043 TCTCGTGGTTGGGTTGGGGTATTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106291 27 + 190779 TCTCGTGGCTGGGTTGGGGTATTCCTG i panPan2.chrUn_NW_014024201v1 T 9 C 0 s gorGor5.CYUI01001831v1 49194 27 - 55620 TCTCGCGGCCGGGTTGGGGTATTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 441453 27 - 91754291 TCTCATGGTTGGGTTGGGGTATTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608299 27 - 1977891 TCTCATGGTTGGGTTGGAGTATTCCTG i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e nomLeu3.chr11 120896021 0 + 123690457 C a score=4820.000000 s hg38.chr3_KI270779v1_alt 141500 5 + 205312 GTCAG s panTro5.chr3 200135049 5 + 202621043 GTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106318 5 + 190779 GTCAG i panPan2.chrUn_NW_014024201v1 C 0 T 32 s gorGor5.CYUI01001831v1 49221 5 - 55620 GTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 441480 5 - 91754291 GTCAG i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e nomLeu3.chr11 120896021 0 + 123690457 C a score=23721.000000 s hg38.chr3_KI270779v1_alt 141505 28 + 205312 TCTCGTGGTTGGGTTGGGGTATTCCTGG s panTro5.chr3 200135054 28 + 202621043 TCTCGCGGCCGGGTTAGGGTATTCCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106291 28 + 190779 TCTCGTGGCTGGGTTGGGGTATTCCTGG i panPan2.chrUn_NW_014024201v1 T 32 C 0 s gorGor5.CYUI01001831v1 49226 28 - 55620 TCTCGCGGCCGGGTTGGGGTATTCCTGG i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 441485 28 - 91754291 TCTCATGGTTGGGTTGGGGTATTCCTGG i chlSab2.chr15 C 0 T 4396 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e nomLeu3.chr11 120896021 0 + 123690457 C a score=56566.000000 s hg38.chr3_KI270779v1_alt 141533 47 + 205312 TCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCCG s panTro5.chr3 200135082 47 + 202621043 TCAGTCTCGCGGCCGGGTCGGGGTATTCCTGGTCAGTCTCGCGGCCG i panTro5.chr3 C 0 I 308 s panPan2.chrUn_NW_014024201v1 106319 47 + 190779 TCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGCGGCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49254 47 - 55620 TCAGTCTCGCGGCCGGGTTGGGGTATTCCTGGTCAGTCTCGCGGCCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896021 41 + 123690457 ------TCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437117 47 - 91754291 TCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTG i chlSab2.chr15 T 4396 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=14358.000000 s hg38.chr3_KI270779v1_alt 141580 16 + 205312 GGTTGGGGTATTCCTG s panPan2.chrUn_NW_014024201v1 106366 16 + 190779 GGTTAGGGTATTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49301 16 - 55620 GGTTGGGGTATTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896062 16 + 123690457 GGCTGGGGTATTCCTG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437164 16 - 91754291 GGTTGGGGTATTCCTG i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e panTro5.chr3 200135129 308 + 202621043 I a score=4365.000000 s hg38.chr3_KI270779v1_alt 141596 3 + 205312 GTC s panTro5.chr3 200135437 3 + 202621043 GTC i panTro5.chr3 I 308 C 0 s panPan2.chrUn_NW_014024201v1 106382 3 + 190779 GTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49317 3 - 55620 GTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896078 3 + 123690457 GTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437180 3 - 91754291 GTC i chlSab2.chr15 C 0 T 32 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=36975.000000 s hg38.chr3_KI270779v1_alt 141599 32 + 205312 AGTCTCGTGGCCGGG-TTGGGGTATT-CCTGGTC s panTro5.chr3 200135440 34 + 202621043 AGTCTCGTGGTTGGGCTTGGGGTATTTCCTGGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106385 32 + 190779 AGTCTCGCGGCCGGG-TCGGGGTATT-CCTGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49320 32 - 55620 AGTCTCGCGGCCGGG-TTGGGGTATT-CCTGGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896081 32 + 123690457 AGTCTCGTGGCTGGG-CTGGGGTATT-CCTGGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437151 32 - 91754291 AGTCTCATGGTTGGG-TTGGGGTATT-CCTGGTC i chlSab2.chr15 T 32 T 126 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=14219.000000 s hg38.chr3_KI270779v1_alt 141631 17 + 205312 AGTCTCGCGGCCGGGTT s panTro5.chr3 200135474 17 + 202621043 AGTCTCACGGCCGGGTT i panTro5.chr3 C 0 I 194 s panPan2.chrUn_NW_014024201v1 106417 17 + 190779 AGTCTCGTGGCCGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49352 17 - 55620 AGTCTCGCGGCCGGGTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896113 17 + 123690457 AGTCTCGTGGCTGGGCT i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e chlSab2.chr15 437183 126 - 91754291 T e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=16370.000000 s hg38.chr3_KI270779v1_alt 141648 17 + 205312 GGGGTATTCCTGGTCAG s panTro5.chr3 2482581 17 - 202621043 GGGGTATTCCTGGTCAG i panTro5.chr3 n 194 C 0 s panPan2.chrUn_NW_014024201v1 106434 17 + 190779 GGGGTATTCCTGGTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49369 17 - 55620 GGGGTATTCCTGGTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896130 17 + 123690457 GGGGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e chlSab2.chr15 437183 126 - 91754291 T e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=10728.000000 s hg38.chr3_KI270779v1_alt 141665 9 + 205312 TCTCGTGGT s panTro5.chr3 2482598 9 - 202621043 TCTCGTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106451 9 + 190779 TCTCGTGGT i panPan2.chrUn_NW_014024201v1 C 0 T 160 s gorGor5.CYUI01001831v1 49386 9 - 55620 TCTCGCGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896147 9 + 123690457 TCTCGTGGC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437057 9 - 91754291 TCTCATGGT i chlSab2.chr15 T 126 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=31930.000000 s hg38.chr3_KI270779v1_alt 141674 23 + 205312 TGGGTTGGGGTATTCCTGGTCAG s panTro5.chr3 2482607 23 - 202621043 TGGGTTGGGGTATTCCTGGTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106300 23 + 190779 TGGGTTGGGGTATTCCTGGTCAG i panPan2.chrUn_NW_014024201v1 T 160 C 0 s gorGor5.CYUI01001831v1 49395 23 - 55620 CGGGTTGGGGTATTCCTGGTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896156 23 + 123690457 TGGGCTGGGGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437066 23 - 91754291 TGGGTTGGGGTATTCCTGGTCAG i chlSab2.chr15 C 0 T 32 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=18374.000000 s hg38.chr3_KI270779v1_alt 141697 16 + 205312 TCTCGTGGTTGGGTTG s panTro5.chr3 2482630 16 - 202621043 TCTCGTGGCTGCGTTG i panTro5.chr3 C 0 T 42 s panPan2.chrUn_NW_014024201v1 106323 16 + 190779 TCTCGTGGTTGGGTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49418 16 - 55620 TCTCGCGGCCGGGTTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896179 16 + 123690457 TCTCGTGGCTGGGCTG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437057 16 - 91754291 TCTCATGGTTGGGTTG i chlSab2.chr15 T 32 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=21334.000000 s hg38.chr3_KI270779v1_alt 141713 16 + 205312 GTGTATTCCTGGTCAG s panTro5.chr3 200135685 16 + 202621043 GTGTATTCCTGGTCAG i panTro5.chr3 I 194 C 0 s panPan2.chrUn_NW_014024201v1 106339 16 + 190779 GGGTATTCCTGGTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49434 16 - 55620 GGGTATTCCTGGTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896195 16 + 123690457 GGGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437073 16 - 91754291 GGGTATTCCTGGTCAG i chlSab2.chr15 C 0 T 32 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=75909.000000 s hg38.chr3_KI270779v1_alt 141729 70 + 205312 TCTC--GTGGTTGGGTTGGGGTATTCCTGGTCAGTCTC----GTGGTTGGGTTGG-GGT-ATTCCTGGTCAGTCTCGT s panTro5.chr3 200135701 74 + 202621043 TCTCGGGCGGTTGGGTTGGCGGATTCCTGGTCAGTCTC----GCGGGCGGCTTGGCGGTCATTCCTGGTCAGTCTCGC i panTro5.chr3 C 0 I 5 s panPan2.chrUn_NW_014024201v1 106355 70 + 190779 TCTC--GCGGCCGGGTTAGGGTATTCCTGGTCAGTCTC----GCGGCCGGGTCGG-GGT-ATTCCTGGTCAGTCTCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49450 74 - 55620 TCTC--GCGGCCGGGTTGGGGTATTCCTGGTCAGTCTCGGGGGCGGCCGGGTTGG-GGT-ATTCCTGGTCAGTCTCGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896211 70 + 123690457 TCTC--GTGGCTGGGCTGGGGTATTCCTGGTCAGTCTC----GTGGCTGGGCTGG-GGT-ATTCCTGGTCAGTCTCGT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437057 70 - 91754291 TCTC--ATGGTTGGGTTGGGGTATTCCTGGTCAGTCTC----ATGGTTGGGTTGG-GGT-ATTCCTGGTCAGTCTCAT i chlSab2.chr15 T 32 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=46441.000000 s hg38.chr3_KI270779v1_alt 141799 41 + 205312 GGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTT s panTro5.chr3 2482604 41 - 202621043 GGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGCGTT i panTro5.chr3 T 42 T 62 s panPan2.chrUn_NW_014024201v1 106425 41 + 190779 GGCCGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49524 39 - 55620 GGCCGGGTT-GGGTATT-CTGGTCAGTCTCGCGGCCGGGTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896281 41 + 123690457 GGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437127 41 - 91754291 GGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTT i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=12740.000000 s hg38.chr3_KI270779v1_alt 141840 15 + 205312 GGGG-TATTCCTGGTC s panPan2.chrUn_NW_014024201v1 106466 16 + 190779 GGGGGTATTCCTGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49563 15 - 55620 GGGG-TATTCCTGGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896322 15 + 123690457 GGGG-TATTCCTGGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437168 15 - 91754291 GGGG-TATTCCTGGTC i chlSab2.chr15 C 0 T 32 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e panTro5.chr3 2482645 62 - 202621043 T a score=8104.000000 s hg38.chr3_KI270779v1_alt 141855 10 + 205312 AGTCTTGTGG s panPan2.chrUn_NW_014024201v1 106482 10 + 190779 AGTCTCGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49578 10 - 55620 AGTCTCGCGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896337 10 + 123690457 AGTCTCGTGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437151 10 - 91754291 AGTCTCATGG i chlSab2.chr15 T 32 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C e panTro5.chr3 2482645 62 - 202621043 T a score=27835.000000 s hg38.chr3_KI270779v1_alt 141865 22 + 205312 TTGGGTTGGGGTATTCCTGGTC s panTro5.chr3 200135780 22 + 202621043 CGGGGTTGGGGTATTCCTGGTC i panTro5.chr3 I 5 C 0 s panPan2.chrUn_NW_014024201v1 106492 22 + 190779 TTGGGTTGGGGTATTCCTGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49588 22 - 55620 CCGGGTTGGGGTATTCCTGGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896347 22 + 123690457 CTGGGCTGGGGTATTCCTGGCC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437161 22 - 91754291 TTGGGTTGGGGTATTCCTGGTC i chlSab2.chr15 C 0 T 64 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=20491.000000 s hg38.chr3_KI270779v1_alt 141887 19 + 205312 AGTCTCGCGGCCGGGTTGG s panTro5.chr3 200135802 19 + 202621043 AGTCTCGCGGCCGGGTTGG i panTro5.chr3 C 0 I 6295 s panPan2.chrUn_NW_014024201v1 106514 19 + 190779 AGTCTCGCGGCCGGGTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49610 17 - 55620 AGTCTCGCGGCCGGGTT-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896369 19 + 123690457 AGTCTCGTGGCTGGGCTGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437119 19 - 91754291 AGTCTCATGGTTGGGTTGG i chlSab2.chr15 T 64 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=21555.000000 s hg38.chr3_KI270779v1_alt 141906 15 + 205312 GGTATTCCTGGTCAG s panTro5.chr3 2482583 15 - 202621043 GGTATTCCTGGTCAG i panTro5.chr3 T 62 C 0 s panPan2.chrUn_NW_014024201v1 106533 15 + 190779 GGTATTCCTGGTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49627 15 - 55620 GGTATTCCTGGTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896388 15 + 123690457 GGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437138 15 - 91754291 GGTATTCCTGGTCAG i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e cerAty1.NW_012004056v1 501962 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=47101.000000 s hg38.chr3_KI270779v1_alt 141921 26 + 205312 TCTCGTGGTTGGGTTGGGGTATTCCT s panTro5.chr3 2482598 26 - 202621043 TCTCGTGGTTGGGTTGGGGTATTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106548 26 + 190779 TCTCGTGGTTGGGTTGGGGTATTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49642 25 - 55620 TCTCGTGGTTGGGTT-GGGTATTCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896403 26 + 123690457 TCTCGTGGCTGGGTTGGGGTATTCCT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 501962 26 + 16847902 TCTCATGGTTGGGTTGGGGTATTCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437153 26 - 91754291 TCTCATGGTTGGGTTGGGGTATTCCT i chlSab2.chr15 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e canFam3.chr33 29082262 5 + 31377067 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=8148.000000 s hg38.chr3_KI270779v1_alt 141947 3 + 205312 GGT s panTro5.chr3 2482624 3 - 202621043 GGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106574 3 + 190779 GGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49667 3 - 55620 GGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896429 3 + 123690457 GGT i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 501988 3 + 16847902 GGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437179 3 - 91754291 GGT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29082267 3 + 31377067 GGT i canFam3.chr33 I 5 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e otoGar3.GL873829 431191 11 - 608964 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=3600.000000 s hg38.chr3_KI270779v1_alt 141950 1 + 205312 C s panTro5.chr3 2482627 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106577 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49670 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896432 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 501991 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437182 1 - 91754291 C i chlSab2.chr15 C 0 T 32 s otoGar3.GL873829 431202 1 - 608964 C i otoGar3.GL873829 I 11 C 0 s canFam3.chr33 29082270 1 + 31377067 C i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=1061.000000 s hg38.chr3_KI270779v1_alt 141951 2 + 205312 AG s panTro5.chr3 2482628 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106578 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49671 2 - 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896433 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 501992 2 + 16847902 AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437151 2 - 91754291 AG i chlSab2.chr15 T 32 C 0 s otoGar3.GL873829 431203 2 - 608964 AC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29082271 1 + 31377067 A- i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e aotNan1.NW_018492867v1 8407 0 + 21398 C e cebCap1.NW_016107444v1 440276 6 - 6778120 I e macNem1.NW_012014355v1 561993 0 + 19675229 C e calJac3.chr17 952996 0 - 74750902 C e saiBol1.JH378146 475729 0 + 17725628 C e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482248 0 + 204787373 C a score=20923.000000 s hg38.chr3_KI270779v1_alt 141953 3 + 205312 TCT s panTro5.chr3 2482630 3 - 202621043 TCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106580 3 + 190779 TCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49673 3 - 55620 TCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896435 3 + 123690457 TTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482248 3 + 204787373 TCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561993 3 + 19675229 TCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501994 3 + 16847902 TTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437153 3 - 91754291 TCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952996 3 - 74750902 TCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475729 3 + 17725628 TCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 8407 3 + 21398 TCT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431205 3 - 608964 TCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29082272 3 + 31377067 CCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e mm10.chr16 65447326 0 - 98207768 C e dasNov3.JH569502 3909323 365 + 6579706 I e cebCap1.NW_016107444v1 440276 6 - 6778120 I e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M a score=51945.000000 s hg38.chr3_KI270779v1_alt 141956 7 + 205312 CGTGGTT s panTro5.chr3 2482633 7 - 202621043 CGTGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106583 7 + 190779 CGTGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49676 7 - 55620 CGTGGCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896438 7 + 123690457 CGTGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482251 7 + 204787373 CATGGTT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 561996 7 + 19675229 CATGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 501997 7 + 16847902 CATGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437156 7 - 91754291 CATGGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952999 7 - 74750902 CATGATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475732 7 + 17725628 CATGATT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 8410 7 + 21398 CATGATT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431208 7 - 608964 CATGGTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447326 7 - 98207768 CATGGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29082275 7 + 31377067 CATGGCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e cebCap1.NW_016107444v1 440276 6 - 6778120 I e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M a score=132168.000000 s hg38.chr3_KI270779v1_alt 141963 17 + 205312 GGGTTGGGGTACTCCTG s panTro5.chr3 2482640 17 - 202621043 GCGTTGGGGTATTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106590 17 + 190779 GCGTTGGGGTATTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49683 17 - 55620 GGGTTTGGGTACTCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896445 17 + 123690457 GGGTTGGGATATTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482258 17 + 204787373 GGGTTGGGGTATTCCTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562003 17 + 19675229 GGGTTGGGGTATTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502004 17 + 16847902 AGGTTGGGGTATTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437163 17 - 91754291 GGGTTGGGGTATTCCTG i chlSab2.chr15 C 0 I 4 s calJac3.chr17 953006 17 - 74750902 GGGTTGGGGTATTCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475739 17 + 17725628 GGGTTGGGGTATTCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440282 17 - 6778120 GGGTTGGGGTGTTCCTG i cebCap1.NW_016107444v1 I 6 C 0 s aotNan1.NW_018492867v1 8417 17 + 21398 GGGTTGGGGTATTCCTG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431215 11 - 608964 ------AGGCACTGCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447333 17 - 98207768 GGAGTAGGGTGTTCCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29082282 17 + 31377067 GTGAGGGGGGATTCCCG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M a score=10920.000000 s hg38.chr3_KI270779v1_alt 141980 1 + 205312 A s panTro5.chr3 2482657 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106607 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49700 1 - 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896462 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482275 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562020 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502021 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437184 1 - 91754291 A i chlSab2.chr15 I 4 C 0 s calJac3.chr17 953023 1 - 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475756 1 + 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440299 1 - 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8434 1 + 21398 A i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431226 1 - 608964 A i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447350 1 - 98207768 A i mm10.chr16 C 0 C 0 s canFam3.chr33 29082299 1 + 31377067 A i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e colAng1.NW_012118932v1 471572 0 + 7796314 C e manLeu1.NW_012102020v1 608326 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M a score=765773.000000 s hg38.chr3_KI270779v1_alt 141981 94 + 205312 GTCAGCTTAATGTCCCTTGACTGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCAACTCTGGCAAA s panTro5.chr3 2482658 94 - 202621043 GTCAGCTTAATGTCCCTTGACTGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCAACTATGGCAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106608 94 + 190779 GTCAGCTTAATGTCCCTTGACTGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCAACTATGGCAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49701 94 - 55620 GTCAGCTTAATGTCCCTTGACTGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCAACTCTGGCAAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896463 94 + 123690457 GTCAGCTTAATGTCCCTTGCCTGGTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCAACTCTGGCAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482276 94 + 204787373 GTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCGACTCTGGCAAT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562021 94 + 19675229 GTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCGACTCTGGCAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502022 94 + 16847902 GTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCGACTCTGGCAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437185 94 - 91754291 GTCAGCTTAATATCCCTTGACAGCTTCCT-CCCATACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GGCTGTCACA-----------GCAGCGACTCTGGCAAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608326 93 - 1977891 GTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCATATTTAAGCCTCAGT-----CCCCTG-CTGCAGG-------GG-TGTCACA-----------GCAGCGACTCTGGCAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471572 93 + 7796314 GTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCGTATTT-AGCCGCAGT-----CCCCTG-CTGCACG-------GGCTGTCACA-----------GCAGCGACTCTGGCAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953024 80 - 74750902 GTCAGCTTGATATCCCTTGCCTGCTTCCT-TCCACAGCCATATTTAAGCCT---------------------------CCTGGCTGTGGCA-----------GCAGTAACTCTGACAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475757 101 + 17725628 ATCAGCTTAATATCCCTTGCCTGCCTCCT-TCCACACCCATATTTAAGCCTCAGT-----CCTCTGCCTGCAGGG-GCCCTGGCTGTGGCA-----------GCAGTAACTCTGGCAAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440300 101 - 6778120 GTCAGCTTAATATCCCTTGCCTGCTTCCT-TCCACACACGTATTTAAGCCTCAGT-----CCCCTGCCGGCAGGG-GCCCTGGCGGTGGCA-----------GCAGTAACTCTGGCAAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8435 96 + 21398 CTCAGCTTAATATCCCT----TGCTTCCT-TCCACACCCACATTTAAGCCTCAGT-----CCCCTGCCTGCA-GG-GCCCTGGCTGTGGCA-----------GCTGTAACTCTGGCAAT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431227 100 - 608964 GTCTATCTGATATGCATTCTCTGCTCCCTCCCCACCCCTGTGTCTAAGCCTCAATTCCAGCCCCTG-CAGCCTG-------GGCTCTGACA-----------GCCATACCATCTGCCAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447351 101 - 98207768 GTCTATTTAGCATTCTTCCTCAGCTCCCT-CTGCACCCTGTATTTAAACTTCAGT-----CCCTTT-CCAT----------GAAAATCACATTCCATGGGATACAATGACCTTGAT-GT i mm10.chr16 C 0 C 0 s canFam3.chr33 29082300 100 + 31377067 GTGTATGTAACAGCCCTGCTCTGTTTCCTCCCCACCCTCATATTTAAACATCACT-----CTCTGC-CCACAGGGAGCCCAGGCTCTGACA-----------GCAGTCACGCTTGC--C i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e dasNov3.JH569502 3909323 365 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M a score=455885.000000 s hg38.chr3_KI270779v1_alt 142075 49 + 205312 GCCTTCCACACAGCTCTTTGTCTCCCC-TGCCAGCTGCTGGGGGATCCTG s panTro5.chr3 2482752 49 - 202621043 GCCTTCCACACAGCTCTTTGTCTCCCT-TGCCAGCTGCTGGGGGATCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106702 49 + 190779 GCCTTCCACACAGCTCTTTGTCTCCCT-TGCCAGCTGCTGGGGGATCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49795 49 - 55620 GCCTTCCACACAGCTCTTTGTCTCCCC-TGCCAGCTGCTGGGGGATCCTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896557 49 + 123690457 GCCTTCCACACAACTCTTTGTCTCCCC-TGCCAGCTACTGGGGGATCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482370 49 + 204787373 GCCTTCCACACAGCTCTTTTTCTCCTC-TGCCAGCTGCTGCGGGATCCTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562115 49 + 19675229 GCCTTCCACACAGCTCTTTTTCTCCTC-TGCCAGCTGCTGCGGGATCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502116 42 + 16847902 GCCTTCCACACAGCTCTGTTTCTCCC--------CTGCTGCGGGATCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437279 42 - 91754291 GCCTTCCACACAGCTCTTTTTCTCCC--------CTGCTGCGGGATCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608419 42 - 1977891 GCCTTCCACACAGTTCTTTTTCTCCT--------CTGCTGCGGGATCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471665 49 + 7796314 GCCTTCCACACAGCTCTTTGTCTCCCC-TGCCAGCTGCTAAGGGATCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953104 49 - 74750902 GCCTTCCACACAGCTCTTTGCCTCCCC-TGCCAGCTGCTGGGGGATCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475858 49 + 17725628 GCCTTCCACACAGCTCTTTGCCTCCCC-TGCCAGCTGCTGGGGGATCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440401 49 - 6778120 GCCTTCCACACAGCTCTTTGCCTTCCC-TGCCAGCTGCCGGGGGATCCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8531 49 + 21398 GCCTTCCACACAGCTCTTTGCCTCCCC-TGCCAGCTGCTGGGGGATCCTG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431327 30 - 608964 GCCCTCCACATAGGCCTTTGTCTCTCC-TGC------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447452 49 - 98207768 GCTCTTGACATGACCTTGATCCCTCCA-GGCAGGATGCTGGGAGTTACTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29082400 46 + 31377067 CACGTTCACAC----CTTTGTCTCTCCTTGCTGGCTGCTGGGAGATCCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3909688 49 + 6579706 GTCCTCCACCTAGACTTCTGTCTCTCC-TTGCTGATGCTTGGAGATTCCG i dasNov3.JH569502 I 365 C 0 e proCoq1.NW_012133858v1 7432699 154 + 22200726 I e micMur3.chr1 25917946 175 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=3236439.000000 s hg38.chr3_KI270779v1_alt 142124 196 + 205312 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCGGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTGAGCA s panTro5.chr3 2482801 196 - 202621043 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAATGGAGCCACCAGGGCCACAGGGTCCTGGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTGAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106751 196 + 190779 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAATGGAGCCACCAGGGCCACAGGGTCCTGGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTGAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 49844 196 - 55620 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCGGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTGAGCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896606 196 + 123690457 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTCGCAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAAATGAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482419 196 + 204787373 ACCGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562164 196 + 19675229 ACCGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCATCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAACATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502158 196 + 16847902 ACTGCC-AGGCTTTGACAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAACATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437321 196 - 91754291 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTCTTGGGAGTGGGTTGGGATAGGAGAAAATCTGGTAGTCTGACTGTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608461 196 - 1977891 ACTGCC-AGGCTTTGACAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAACATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471714 196 + 7796314 ACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953153 196 - 74750902 ACTGCC-AGGCTTTGAGAGGCTCACCCGGTAAAATACGGTCCCTCGACCGTCGGAGAAATCAGCATCATCCCAGAACGGAGCCACCAGGGCCACAGTCTCCCAGCCTGTGAAGCCTGTTGGGAGCGGGTTTGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCGTTGTCTGTGAACTGAGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 475907 196 + 17725628 ACTGCC-AGGCTTTGAAAGGCTCACCCGGTAAAATATGGTCCCCTGACCATTGGAGAAATCAGCATCATCCCAGAACGGGGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGCGGGTTTGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCGTTGTCTGTGAACTGAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440450 196 - 6778120 ACTGCC-AGGCTTCGAAAGGCTCACCCGGTAAAATATGGTCCCCCGACCACCGGAGAAATCGGCATCATCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGCGGGTTTGGGTACGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCGTTGTCTGTGAACTGAGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8580 196 + 21398 ATTGCC-AGGCTTTGAAAGGCTCACCCGGTAAAATATGGTCCCCCGACCATGGGAGAAATCAGCATCATCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCCGCGAAGCCTGTCGGGAGCGGGTTTGGGTAGGAGAAAATCTGGTCGTCTGACTCTGGGAAGATGATCTGGCCGTTGTCTGTGAACTGAGCA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25918121 196 - 114275543 ACTGCC-AGGCTGTGAAAGGCTCACCTGGTAATATGTGGTTCCCCAGCCGCTGGAGAAGTCAGCATCGTCCCAAAACGGAGCCACCAGGGCCACAAGTTCCCAGCCTGTGAAGCGTCTTTGGAGTGGGTGGGGGTAGGAGAAAATCTGGTAGTCTGAGTCTGGGAAAATGATCTGGCCATTATCTGTGAACTGAGCA i micMur3.chr1 I 175 I 1133 s proCoq1.NW_012133858v1 7432853 196 + 22200726 ACTGCC-AGGCTGTGAAAGGCTCACCTGGTAATATGTGGTTCCCCAGCCGCTGGAGAAGTCAGCATCATCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCCGTGAAGCGTCTTTGGAGTGGGTGGGGGTAGGAGAAAATCTGGTAGTCTGAGTCTGGGAAAATGATCTGGCCATTATCTGTGAACTGAGCA i proCoq1.NW_012133858v1 I 154 C 0 s otoGar3.GL873829 431357 186 - 608964 -----------TTTGAAAGGCTCACCTGGTAAAATGTGGTTCCCCGGCTGCTAGAGAAATCAGCATCATCCCAGAACGGAGCCACCAGAGCCACAGGGTCCTGGCCTGTGAAGCCTCTTAGGGGTGGGTAGGGGTAGGAGAAAATCTGGTAGTCTGACTCCGGGAAAACAATCTGGCCATTATCCGTGAACTGTATA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447501 197 - 98207768 ACTGCCAAGGACTTGAATGACTCACCTGGTAAAATATGGCTCCCCTGGAGCTAGAGAAATCAGCATCAGCCCAGAACGGGGCCACCATGGCCACGCGCTCCCTTCCGGTGAAGCCTCTTTGAGGTGGGTTGGGGTAGGAGAAGACGTCATAGTCTGACTCTGGGAAAATGATCTGACCATTATCTGTAACCTGAGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29082446 196 + 31377067 AATGCT-GGACTTTGAAAGGCTCACCTGGTAAAATATGGTCCCCTGGCCACTGGAAAAATCAGCATCGTCCCAGAATGGAGCCACCATGGCCACAGGGTCCCTGCCTGTGAAGCCTCTAAGGGGAGGATTGGGGTAGGAGAAAATCTGGTACTCTGACTCCGGGAAAATGATCTGGCCATTATCTGTGAACTGGGAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3909737 196 + 6579706 AAAGCC-AGGCTTTGAAAAGCCCACCTGGTAAAATATGGTTCCTTGATGGCTGGAGAAATCAGCATCATCCCAAAATGGAGCCACCAGGGCCACAGGGTCCCAGTGCGTGAACTGTCTAAAGGGTGGGTTGGGGTAGGAGAAAATCTTGTTGTCTGATTCAGGAAAAATGATCTGGCCATTATCTGTGAACTGAGAA i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M a score=583426.000000 s hg38.chr3_KI270779v1_alt 142320 58 + 205312 CATGGGTTTTGTGGTCAGCATTCAGGGA------------GGGAAGTGGGGAGGAAA-GTCCCAGCCTTGG s panTro5.chr3 2482997 58 - 202621043 CATGGGTTTTGTGGTCAGCATTCAGGGA------------GGGAAGTGGGGAGGAAA-GTCCCAGCCTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 106947 58 + 190779 CATGGGTTTTGTGGTCAGCATTCAGGGA------------GGGAAGTGGGGAGGAAA-GTCCCAGCCTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50040 58 - 55620 CATGGGTTTTGTGGTCAGCATTCAGGGA------------GGGAAGTGGGGAGGAAA-GTCCCAGCCTTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896802 58 + 123690457 CACGGGTTTTGTGGTCAGCATTCAGGGA------------GGGAAGTGGGGAGGAAA-GTCCCAGCCTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482615 58 + 204787373 CACAGGTTTTGTGGTTACCATTCAGGGA------------GGAAGGTGGGGAGGAAA-GTCCCAGCCTTGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562360 58 + 19675229 CACAGGTTTTGTGGTTACCATTCAGGGA------------GGAAGGTGGGGAGGAAA-GTCCCAGCCTTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502354 58 + 16847902 CACAGGTTTTGTGGTTACCATTCAGGGA------------GGAAGGTGGGGAGGAAA-GTCCCAGCCTTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437517 58 - 91754291 TACAGGTTTTGTGGTTACCATTCAAGGA------------GGAAGGTGGGGAGGAAA-GTCCCAGCCTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608657 58 - 1977891 CACAGGTTTTGTGGTTACCATTCAGGGA------------GGAAGGTGGGGAGGAAA-GTCCCAGCCTTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471910 58 + 7796314 CACGGGTTTTGTGGTTACCATTCAGGGA------------GGAAGGTGGGGAGGAAA-GTCCCAGCCTTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953349 58 - 74750902 CAAGGGTTTTGT-GTGAGCATTCAGGGA------------GGGAGGTGGGGAGGAAACGCCCCAGCCTTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476103 46 + 17725628 CAAGGGTTTTGT-GAGAGCATTCAGGGA------------GGGAGGTGGGAAGGAAACG------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440646 58 - 6778120 CAAGGGTTTTGT-GTGAGCATTCAGGGA------------AGGAGGTGGGGAGGAAACGGCCCAGCCTTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8776 58 + 21398 CAAGGGTTTTGT-GTGAGCGTTCAGGGA------------GGGAGGTGGGGAGGAAATGGCCCAGCCTCGG i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7433049 52 + 22200726 CAGGGTTTTAGCATTCA-------GGGA------------GAGAGGTGGGGAGGAGACGTCCCAGCCTTGG i proCoq1.NW_012133858v1 C 0 I 366 s otoGar3.GL873829 431543 56 - 608964 -AAGGTTTTCATAGTTAGCACT--GGGG------------GTGGAGAGGGGAGGGAATGTCCCGGCCTAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447698 50 - 98207768 CAAGGGTTCT-TGGTTA-------GGGA------------GGGATGAGGGAAGGGTT-ATCCTAGTCTAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29082642 71 + 31377067 CACAGAAGTTCTGGTTAGTGTCCagggagggagggagcgggggaggcagggagagaACGTCCCAGGCGTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3909933 57 + 6579706 CAAGGGTTCTT--GTTAGTATTCAGGGA------------GGGAGGCAGGGAAGGAATTTCCCAGCCATGG i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25918317 1133 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=2005429.000000 s hg38.chr3_KI270779v1_alt 142378 260 + 205312 TCCAGCTCCTCAAAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGAGATGCTAACAACCCCTG-GAAG-TCACCTC--CTGTG--TCCTGTTTT--G---GGGAGAGCCCTTTCCATA-TAATCTCACAGA---ATGCTCCGCCC--TCAGGCCATCCCT-----------TGCGTC------------------------CTCGGGTGGTAGGCTTGG-TCCTGTTTCACT-GCAGATCCCTGGCCGTGGACCAG-CCCCTCACA-GGCACACCCCTCTTGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGTTTGCGACAC s panTro5.chr3 2483055 260 - 202621043 TCCAGCTCCTCAAAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGACATGCTAACAACCCCTG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--G---GGGAGAGCCCTTTCCATG-TAATCTCACAGA---ATGCTCCGCCC--TCAGGCCATCCCT-----------TGCGTC------------------------CTCGGGTGGTAGGTTTGG-TCCTGTTTCACT-GCAGATCCCTGGCTGTGGACCAG-CCCCTCACA-GGCACACCCCTCTTGACCAGTCCCCTG----------GGCCCTATCCT--------GAAGTTTGCGACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107005 260 + 190779 TCCAGCTCCTCAAAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGACATGCTAACAACCCCTG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--G---GGGAGAGCCCTTTCCATG-TAATCTCACAGA---ATGCTCCGCCC--TCAGGCCATCCCT-----------TGCGTC------------------------CTCGGGTGGTAGGTTTGG-TCCTGTTTCACT-GCAGATCCCTGGCTGTGGACCAG-CCCCTCACA-GGCACACCCCTCTTGACCAGTCCCCTG----------GGCCCTATCCT--------GAAGTTTGCGACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50098 259 - 55620 TCCAGCTCCTCAAAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGAGATGCTAACAACCCCTG-GAAG-TCACCTC--CTGTG--TCCTGGCGT--G---GGGAGAGCCCTTTCCATG-TAATCTCACAGA---ATGCTCCGCCC--TCAGGCCATCCCT-----------TGC-TC------------------------CTCGGGTGGTAGGCTTGG-TCCTGTTTCACT-GCAGATCCCTGGCTGTGGACCAG-CCCCTCACA-GGCACACCCCTCTTGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGTTTGCGACAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120896860 247 + 123690457 TCCAGCTCCTCAGAAGCGTG-------A----------GGG----------------TAGAGCTT-------TAGAGATGCT---AACCCCTG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--G---GGGAGAGCCCTTTCCATA-TAATCTCACAGA---GTGCTCCCCCC--TCAGGCCATCCCT-----------TGCG---------------------------TCGGGTGGTAGGCTTGG-TCCTGTTTCACT-GCAGATCCCTGGCTGTGGACCAG-CCCCTCACA-GGCACACCCCTCTTGGCCAGTGCCCTG----------GGCCCCATCCT--------GAAGTTTGTGACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482673 260 + 204787373 TCCAGCTCCACAGAAGCGTGACCCCCGA----------GGG----------------TAGAGCTT-------TAGAGGTGCTAACAACCCCGG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--T---GGGAGAGCCCTTTCCGTA-TAATCTCACAGA---ATACTCCACCC--TTAAGGCATCCCT-----------TGGGTC------------------------CTTGGGTGGTCGGCTTGG-TCCTGTTTCACT-GCAGATCCCCGGCTGTGGACCAG-CCAATCACA-GACACATCCCTCTTGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562418 260 + 19675229 TCCAGCTCCACAGAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGAGGTGCTAACAACCCCGG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--C---GGGAGAGCCCTTTCCGTA-TAATCTCACAGA---ATACTCCACCC--TTAAGGCATCCCT-----------TGGGTC------------------------CTTGGGTGGTCGGCTTGG-TCCTGTTTCACT-GCAGATCCCCGGCTGTGGACCAG-CCAATCACA-GACACATCCCTCTTGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGCCTGTGACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502412 260 + 16847902 TCCAGCTCCACAGAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGAGGTGCTAACAACCCCGG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--C---GGGAGAGCCCTTTCCGTA-TAATCTCACAGA---ATACTCCACCC--TTAAGGCATCCCT-----------TGGGTC------------------------CTTGGGTGGTCGGCTTGG-TCCTGTTTCACT-GCAGATCCCCGGCTGTGGACCAG-CCAATCACA-GACACATCCCTCTGGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437575 260 - 91754291 TCCAGCTCCACAGAAGCGTGATCCCCAA----------GGG----------------TAGAGCTT-------TAGAGGTGCTAACAACCCCGG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--C---GGGAGAGCCCTTTCCATA-TAATCTCACAGA---ATACTCCACCC--TTAAGGCATCCCT-----------TGGGTC------------------------CTTGGGTGGTCGGCTTGG-TCCTGTTTCACT-GCAGATCCCCGGCTGTGGACCAG-CCAATCACA-GACACATCCCTCTTGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608715 260 - 1977891 TCCAGCTCCACAGAAGCGTGACCCCCAA----------GGG----------------TAGAGCTT-------TAGAGGTGCTAACAACCCCGG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--C---GGGAGAGCCCTTTCCGTA-TAATCTCACAGA---ATACTCCACCC--TTAAGGCATCCCT-----------TGGGTC------------------------CTTGGGTGGTCGGCTTGG-TCCTGTTTCACT-GCAGATCCCCGGCTGTAGACCAG-CCAATCACA-GACACATCCCTCTTGGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 471968 284 + 7796314 TCCAGCTCCACAGAAGCGTGACCCCCAG----------GGG----------------TAGAGCTT-------TAGAGGTGCTCACAACCCCGG-GAAG-TCACCTC--CTGTG--TCCTGGCTT--C---GGGAGAGCCCTTTCCGTA-TAATCTCACAGA---ATGCTCCACCC--TTAAGGCGTCCCT-----------TGGGTCcttgggtggtagcttgggtggtagcttgggtggtaggcttgg-TCCTGTTTCACT-GCAGACCCCCGGCTGTGGACCAG-CCAGTCACA-GACACACCCCTCTTTGCCAGTCCCCTG----------GGCCCCATCCT--------GAAGCCTGTGACAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953407 244 - 74750902 CCCAGCTCCTCAGAAGC-CGACCCCCAGGGGCCTCTCTGGG----------------TGGAGCTT-------TAGAGAC--TAACAACCCCTG-GAAG-TCATCTC--CTATG--TCCTGATTT--C---AGGAGAGACCTTTCCGTA-T-----------------------------GGGCCATCCCT-----------TGGGTC------------------------CTCAGGTGGTAGGCTTGG-TCCTGCTTCAGT-ACAGACCCCTGGCTGTGGACCAGCCCCCTCACA-GGCACACCTCTCTTGGCCAGTCCTCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476149 237 + 17725628 ------TCCTCAGAAGC-CGACCCCCAGGGGCCTCTCTGGG----------------TAGAGCGT-------TAGGGACTATAACAACCCCT--GAAG-TCATGTC--CTATG--TCCTGACTT--C---GGGAGAGACCTTTCCGAA-T-----------------------------GGGTCGTCCCT-----------TGGGTC------------------------CTCAGGTGATGGGCTTGG-TCCTGTTTCAGT-GCAGACCCCTGG-TGTGGACCAG-CCCCTCACA-GGCACACCTCTCTTGGCCAGTCCTCTG----------GGCCTCATCCT--------GAAGCTTGTGACAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440704 244 - 6778120 CCCAGCTCCTCAGAAGC-CGACCCCCAGGGGCCTCTCTGGG----------------TGGAGCTT-------TAGAGACGCTAACAACCCCTG-GAAG-TCATGTC--CTAT---TCCTGACTT--C---GGGAGAGACCTTTCCGTA-T-----------------------------GGGCCATCCCT-----------TGGGTC------------------------CTCAGGCGGTGGGCTTGG-TCCTGCTTCGGT-GCAGACCCCTGGCTGTGCACCAG-CCCCTCACA-GGCACACCTCTCTTGGCCGGTCCTCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 8834 245 + 21398 CCCAGCTCCTCAGAAGC-TGACCCCCAGGGGCCTCTCTGGG----------------TGGAGCTT-------TAGAGACGCTAACAACCCCTG-GAAG-CCATGTC--CTATG--TCCTGACTT--C---GGGAGAGACCTTTCCGTA-T-----------------------------GGGCCATCCCT-----------TGGGTC------------------------CTCAGGCGGTGGGCCTGG-TCCTGCTTCAGT-GCAGACCCCTGGCTGTGGACCAG-CCCCTCATA-GGCACAGCTCTCTTGGCCAGTCCTCTG----------GGCCCCATCCT--------GAAGCTTGTGACAC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431599 316 - 608964 GTGGGCTTCTCAGAAGTGT----CCCAAGGTCCTCTTTGGGATCATTCCTCTATTTCCAGTGCCTAGCCTAACAGAGATGTCAATGCCCCCCG-TAAGTTCATCTCATCCATA--TACTGATGT--CT--GGGAGTATATTTTAGGTAGTAATCTCATAAAAACATTCTTCATCC--TCAGGCCATTCCT-----------GTGGTC------------------------GTAAGGTG-TGGCTTTTG-TCACCCATCAGTGGTATATCCCTGGCCATAGAGCAG-TACTTCACAGGGCACATCCTGCCCCACCCCCAACCTGTGGACAAGGTGTCTCTACCCTTGTAGAGGGTAGCTTGTGACAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65447748 256 - 98207768 ACCAGTTCCTCGGAAGAGCTCCCCTTAAAAGCCCATCTGTG----------------CAGAGGGT-------TTGAGGTATCAA----CCTTG-ACGG-CCCCCTT--GTGCACTTTTTAGCCTTCC---AGGAGAACTCAAAACTTAGCAACCTCACAAA----TACTCATCCCTATCAGGACATTCCC--------ACATCAGTC------------------------C-AAAATAGTGGGCGGTG-TTCGGC----CT-GCA---TCCAGGCT-TGCCTCAG-----------AGCAAAGCCTTCTTGGTAAAGTGTTT-----------CACCCTTTCTT--------GAAGCTTGTGACAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29082713 283 + 31377067 GCCGGTTCCTCAGAAGTGTGATCCCCAAGGACCTCTCTGGG----------------TGGAACTT-------TAGGGATGTCAACAACCACTGCCAGG-TCGTCCC--ATTCG--TCCCCGCCT--G---CTGGGCCACCTTGCTTAG-TCCTCACACAGA--TGCTCTTCACCT--GCAGGACACTCCTC-TGTTTTAAGTCCTTC------------------------CTGACAAGGTAGGTTTTG-CCCTGCCTCGGC-GGCCAACCCCATCCATAGCCGGC-CCCAGCGCGGGGCGGAGCCCTCTGGGTGGATCCCCAC----------GGAGCCTTCCT--------GAAGTCCCAGCAGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3909990 281 + 6579706 GTCTGCTCCTTAGAAGTGTGGCCCCAAG-GGCCTCCCAGGG----------------TAGAACAT-------CAGAGATGCCAGTGACCCCTGGGAGG-CCATCTCATCCACC--TCCCTGCCT--CTTAGGTGGAGCCCTTTGCATAGTGATCTGACACAAATACTTCTCACCC--TCATGACATTCCTCACCACCCAATTCCTTT------------------------CCAAGGTCCTACGTTTTGTTCCTGCCTCCCG-CCCCGCCCCTG--------CCAG-ACTACAGCA-GAC-CAGCCCT-TTGGTAAATGCTCTG----------GGTTTCATCTT--------GAAGTTTGTACCAC i dasNov3.JH569502 C 0 I 9 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e macFas5.chr2 83084 14732 + 192460366 M a score=160812.000000 s hg38.chr3_KI270779v1_alt 142638 18 + 205312 A---TTAGGTGGG-GCTCAGGG s panTro5.chr3 2483315 18 - 202621043 A---TTAGGTGGG-GCTCAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107265 18 + 190779 A---TTAGGTGGG-GCTCAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50357 18 - 55620 A---TTAGGTGGG-GCTCAGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897107 18 + 123690457 A---TTAGGTGGG-GCTCAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482933 18 + 204787373 A---TCATGTGGG-GCTCAGGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562678 18 + 19675229 A---TCATGTGGG-GCTCAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502672 18 + 16847902 A---TCATGTGGG-GCTCAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437835 18 - 91754291 A---TCATGTGGG-GCTCAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 608975 18 - 1977891 A---TCATGTGGG-GCTCAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472252 18 + 7796314 A---TCATGTGGG-GCTCAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953651 18 - 74750902 A---TCAGATGAG-GCTCAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476386 17 + 17725628 A---TCAGGTGAT-GCTC-GAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 440948 18 - 6778120 A---TCAGGTGAG-GCTCAGGG i cebCap1.NW_016107444v1 C 0 I 184 s aotNan1.NW_018492867v1 9079 18 + 21398 A---TCAAGTGAG-GCTCAGGG i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 431915 22 - 608964 AGTTCCAGATGTGTGCTAAAGG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65448004 18 - 98207768 A---TCAGATGAG-GGTAAAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29082996 18 + 31377067 A---TCAGATGGG-GCTAAGAG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e dasNov3.JH569502 3910271 9 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M a score=44005.000000 s hg38.chr3_KI270779v1_alt 142656 7 + 205312 AGTGGAA s panTro5.chr3 2483333 7 - 202621043 GGTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107283 7 + 190779 GGTGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50375 7 - 55620 GGTGGAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897125 7 + 123690457 GGTGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482951 7 + 204787373 GATGGAA i rheMac8.chr2 C 0 I 8 s macNem1.NW_012014355v1 562696 7 + 19675229 GATGGAA i macNem1.NW_012014355v1 C 0 I 8 s cerAty1.NW_012004056v1 502690 7 + 16847902 GGTGGAA i cerAty1.NW_012004056v1 C 0 I 8 s chlSab2.chr15 437853 7 - 91754291 GGTGGAA i chlSab2.chr15 C 0 I 2 s manLeu1.NW_012102020v1 608993 7 - 1977891 GGTGGAA i manLeu1.NW_012102020v1 C 0 I 8 s colAng1.NW_012118932v1 472270 7 + 7796314 GGTGAAA i colAng1.NW_012118932v1 C 0 I 2 s calJac3.chr17 953669 7 - 74750902 GGTAGAG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 476403 7 + 17725628 GGTGGAG i saiBol1.JH378146 C 0 I 1 s aotNan1.NW_018492867v1 9097 7 + 21398 GGTGGAG i aotNan1.NW_018492867v1 C 0 I 1 s otoGar3.GL873829 431938 7 - 608964 ACTGCCA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65448022 7 - 98207768 GGTCAAT i mm10.chr16 C 0 I 1 s canFam3.chr33 29083014 7 + 31377067 GATTGCT i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e dasNov3.JH569502 3910271 9 + 6579706 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=19403.000000 s hg38.chr3_KI270779v1_alt 142663 4 + 205312 CCCT s panTro5.chr3 2483340 4 - 202621043 CCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107290 4 + 190779 CCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50382 4 - 55620 CCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897132 4 + 123690457 CCCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437862 4 - 91754291 CCTG i chlSab2.chr15 I 2 C 0 s colAng1.NW_012118932v1 472279 4 + 7796314 CCCG i colAng1.NW_012118932v1 I 2 C 0 s calJac3.chr17 953677 4 - 74750902 CCCC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 476411 4 + 17725628 CCCC i saiBol1.JH378146 I 1 C 0 s aotNan1.NW_018492867v1 9105 4 + 21398 CCCC i aotNan1.NW_018492867v1 I 1 C 0 s otoGar3.GL873829 431945 4 - 608964 CCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448030 4 - 98207768 TCCT i mm10.chr16 I 1 C 0 s canFam3.chr33 29083021 4 + 31377067 CCCC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e dasNov3.JH569502 3910271 9 + 6579706 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562703 8 + 19675229 I e manLeu1.NW_012102020v1 609000 8 - 1977891 I e cerAty1.NW_012004056v1 502697 8 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482958 8 + 204787373 I a score=5159.000000 s hg38.chr3_KI270779v1_alt 142667 1 + 205312 C s panTro5.chr3 2483344 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107294 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50386 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897136 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437866 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 472283 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953681 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476415 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 9109 1 + 21398 C i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65448034 1 - 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr33 29083025 1 + 31377067 T i canFam3.chr33 C 0 I 3 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e dasNov3.JH569502 3910271 9 + 6579706 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562703 8 + 19675229 I e manLeu1.NW_012102020v1 609000 8 - 1977891 I e cerAty1.NW_012004056v1 502697 8 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482958 8 + 204787373 I a score=-1291.000000 s hg38.chr3_KI270779v1_alt 142668 3 + 205312 TCT s panTro5.chr3 2483345 3 - 202621043 CTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107295 3 + 190779 CTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50387 3 - 55620 CCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897137 3 + 123690457 CCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437867 3 - 91754291 TCT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 472284 1 + 7796314 T-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953682 3 - 74750902 TCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476416 3 + 17725628 TCC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 9110 3 + 21398 TCC i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65448035 3 - 98207768 ATT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562703 8 + 19675229 I e manLeu1.NW_012102020v1 609000 8 - 1977891 I e cerAty1.NW_012004056v1 502697 8 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482958 8 + 204787373 I a score=25390.000000 s hg38.chr3_KI270779v1_alt 142671 9 + 205312 CCATCGCTC s panTro5.chr3 2483348 9 - 202621043 CCATCGCTC i panTro5.chr3 C 0 I 56 s panPan2.chrUn_NW_014024201v1 107298 9 + 190779 CCATCGCTC i panPan2.chrUn_NW_014024201v1 C 0 I 56 s gorGor5.CYUI01001831v1 50390 9 - 55620 CCATCGCTC i gorGor5.CYUI01001831v1 C 0 I 28 s nomLeu3.chr11 120897140 9 + 123690457 CCATCACTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437870 9 - 91754291 CCATCACTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953685 9 - 74750902 CCATTTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476419 9 + 17725628 CCATCTCTC i saiBol1.JH378146 C 0 I 28 s aotNan1.NW_018492867v1 9113 9 + 21398 CCATCTCTC i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562703 8 + 19675229 I e colAng1.NW_012118932v1 472285 0 + 7796314 C e manLeu1.NW_012102020v1 609000 8 - 1977891 I e cerAty1.NW_012004056v1 502697 8 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482958 8 + 204787373 I a score=29235.000000 s hg38.chr3_KI270779v1_alt 142680 17 + 205312 AGTGGGTGGAGCCCTCC s panTro5.chr3 2483413 17 - 202621043 AGTGGGTGGAGCTCTCC i panTro5.chr3 I 56 C 0 s panPan2.chrUn_NW_014024201v1 107363 17 + 190779 AGTGGGTGGAGCTCTCC i panPan2.chrUn_NW_014024201v1 I 56 C 0 s gorGor5.CYUI01001831v1 50427 17 - 55620 GGTGGGTGGAGCCCTCC i gorGor5.CYUI01001831v1 I 28 C 0 s nomLeu3.chr11 120897149 17 + 123690457 AGGGAGTGGAGCCCTCC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437879 16 - 91754291 AG-GAGTGTAGACACCC i chlSab2.chr15 C 0 I 1 s calJac3.chr17 953694 16 - 74750902 -AGGGGTAGAAACCTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476456 17 + 17725628 ATGGGGTGGAGACCTCT i saiBol1.JH378146 I 28 C 0 s aotNan1.NW_018492867v1 9122 17 + 21398 AGGGGGTAGAAACCTCT i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562703 8 + 19675229 I e colAng1.NW_012118932v1 472285 0 + 7796314 C e manLeu1.NW_012102020v1 609000 8 - 1977891 I e cerAty1.NW_012004056v1 502697 8 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202482958 8 + 204787373 I a score=65964.000000 s hg38.chr3_KI270779v1_alt 142697 10 + 205312 CTCCGTCGCT s panTro5.chr3 2483430 10 - 202621043 CTCCGTCGCT i panTro5.chr3 C 0 T 4413 s panPan2.chrUn_NW_014024201v1 107380 10 + 190779 CTCCATCGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50444 10 - 55620 CTCCGTCGCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897166 10 + 123690457 CTCCATTGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482966 10 + 204787373 CTCCATCACT i rheMac8.chr2 I 8 C 0 s macNem1.NW_012014355v1 562711 10 + 19675229 CTCCATCACT i macNem1.NW_012014355v1 I 8 C 0 s cerAty1.NW_012004056v1 502705 10 + 16847902 CTCCATCACT i cerAty1.NW_012004056v1 I 8 C 0 s chlSab2.chr15 437896 10 - 91754291 CTCCATCACT i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 609008 10 - 1977891 CTCCATCACT i manLeu1.NW_012102020v1 I 8 C 0 s colAng1.NW_012118932v1 472285 10 + 7796314 CTCCATCTCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953710 10 - 74750902 CTCCATCAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476473 10 + 17725628 CTCCACTGCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 9139 10 + 21398 CTCCATCACT i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=17381.000000 s hg38.chr3_KI270779v1_alt 142707 2 + 205312 CA s panTro5.chr3 2479027 2 - 202621043 CA i panTro5.chr3 T 4413 C 0 s panPan2.chrUn_NW_014024201v1 107390 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50454 2 - 55620 CA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897176 2 + 123690457 CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202482976 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562721 2 + 19675229 CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502715 2 + 16847902 CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437906 2 - 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609018 2 - 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472295 2 + 7796314 CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953720 2 - 74750902 CA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 476483 2 + 17725628 CA i saiBol1.JH378146 C 0 I 1 s aotNan1.NW_018492867v1 9149 2 + 21398 CA i aotNan1.NW_018492867v1 C 0 I 43 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=83856.000000 s hg38.chr3_KI270779v1_alt 142709 17 + 205312 GGGGTGTAGACACCCTC s panTro5.chr3 2479029 17 - 202621043 GGGGTGTAGACACCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107392 17 + 190779 GGGGTGTAGACACCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50456 17 - 55620 GGGGCGTACACACCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897178 17 + 123690457 GGGGTGTAGACACCCCC i nomLeu3.chr11 C 0 I 9794 s rheMac8.chr2 202482978 17 + 204787373 GGAGTGTAGACACCCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562723 17 + 19675229 GGAGTGTAGACACCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502717 17 + 16847902 GGAGTGTAGACACCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437908 15 - 91754291 GGAGTGTAGACACC--C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609020 17 - 1977891 GGAGTGTAGACACCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472297 17 + 7796314 GGAGTGTAGACACCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953723 14 - 74750902 GGGGTGAAGA---TCTC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 476486 16 + 17725628 GGGGTGGAGATG-TCTC i saiBol1.JH378146 I 1 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=56277.000000 s hg38.chr3_KI270779v1_alt 142726 15 + 205312 TCTCCATCGCTCAGG- s panTro5.chr3 2479046 15 - 202621043 TCTCCATCGCTCAGG- i panTro5.chr3 C 0 I 4413 s panPan2.chrUn_NW_014024201v1 107409 15 + 190779 TCTCCATCGCTCAGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50473 15 - 55620 TCTCCACCGCTCAGG- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202482995 15 + 204787373 TCTCCATCAGTCACA- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562740 15 + 19675229 TCTCCATCAGTCACA- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502734 15 + 16847902 TCTCCATCAGTCAGA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437923 15 - 91754291 TCTCCATCACTCAGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609037 15 - 1977891 TCTCCATCAGTCACA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472314 15 + 7796314 TCTCCATCAGTCAGA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953737 16 - 74750902 TCACCATCACTCATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476502 16 + 17725628 TCGCCATCGCTCAGAG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897195 9794 + 123690457 I a score=34944.000000 s hg38.chr3_KI270779v1_alt 142741 15 + 205312 GGTGCAGACA----CCCCA s panTro5.chr3 2483474 15 - 202621043 GGTGCAGACA----CCCCA i panTro5.chr3 I 4413 C 0 s panPan2.chrUn_NW_014024201v1 107424 15 + 190779 GGTGCAGACA----CCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50488 15 - 55620 GGTGCAGACA----CCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483010 15 + 204787373 AGTGTAGACA----GCCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562755 15 + 19675229 AGTGTAGACA----GCCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502749 15 + 16847902 AGTGTAGACA----GCCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437938 13 - 91754291 AGTATAGACA----CCC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609052 15 - 1977891 AGTGTAGACA----GCCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472329 15 + 7796314 AGTGTAGACA----GCCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953753 14 - 74750902 GGTGGAAATC----CTTC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476518 18 + 17725628 GGTGGAGATCTCTTTCTC- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897195 9794 + 123690457 I a score=119362.000000 s hg38.chr3_KI270779v1_alt 142756 24 + 205312 TCTCCATCACTTAGGGGGTGGAA---C s panTro5.chr3 2483489 24 - 202621043 TCTCCATCACTTAGGGGGTGGAA---A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107439 24 + 190779 TCTCCATCACTTAGGGGGTGGAA---A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50503 24 - 55620 TCTCCATCACTTAGGGGGTGAAG---C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906989 24 + 123690457 TCTCCATCACTTAGGGGGTGGAA---A i nomLeu3.chr11 I 9794 C 0 s rheMac8.chr2 202483025 24 + 204787373 TCTCCATCCCTCAGTGGCTGGAG---C i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562770 24 + 19675229 TCTCCATCCCTCAGTGGCTGGAG---C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502764 24 + 16847902 TCTCCATCCCTCAGTGGCTGGAG---C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437951 26 - 91754291 TCTCCATCACTCAGGAG-TGTAGACAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609067 24 - 1977891 TCTCCATCCCTCAGTGGCTGGAG---C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472344 24 + 7796314 TCTCCATCATTCAGGGGGTGGAG---C i colAng1.NW_012118932v1 C 0 T 1 s calJac3.chr17 953767 24 - 74750902 TCTCCATCACTCAGGGGGTGGAG---A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476536 24 + 17725628 TCTCCATCACTCAGAGGGTGGAG---A i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=13502.000000 s hg38.chr3_KI270779v1_alt 142780 4 + 205312 CCTC s panTro5.chr3 2483513 4 - 202621043 CCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107463 4 + 190779 CCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50527 4 - 55620 CCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907013 4 + 123690457 CCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483049 4 + 204787373 CCTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562794 4 + 19675229 CCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502788 4 + 16847902 CCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437977 4 - 91754291 CCTC i chlSab2.chr15 C 0 I 14 s manLeu1.NW_012102020v1 609091 4 - 1977891 CCTG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953791 4 - 74750902 TCTC i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 476560 4 + 17725628 TGTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472368 1 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=51415.000000 s hg38.chr3_KI270779v1_alt 142784 14 + 205312 TATCTATTGCTCAG s panTro5.chr3 2483517 14 - 202621043 TCTTTATTGCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107467 14 + 190779 TCTCTATCGCTCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50531 14 - 55620 TATCTATTGCTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907017 14 + 123690457 TCTCCATCGCTGAG i nomLeu3.chr11 C 0 T 111 s rheMac8.chr2 202483053 14 + 204787373 TCTCCATCACTCAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562798 14 + 19675229 TCTCCATCACTCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502792 14 + 16847902 TCTCCATCACTCAG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609095 14 - 1977891 TCTCCATCACTCAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953797 14 - 74750902 TTTCCATTGCTCAG i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 476564 14 + 17725628 TCTCCATCTCTCAA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472368 1 + 7796314 T e chlSab2.chr15 437981 14 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=-3158.000000 s hg38.chr3_KI270779v1_alt 142798 2 + 205312 CA- s panTro5.chr3 2483531 2 - 202621043 CA- i panTro5.chr3 C 0 T 4472 s panPan2.chrUn_NW_014024201v1 107481 2 + 190779 CA- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50545 2 - 55620 CA- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483067 2 + 204787373 CG- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562812 2 + 19675229 CG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502806 2 + 16847902 CG- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609109 2 - 1977891 CG- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953811 2 - 74750902 -GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476578 2 + 17725628 -GG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472368 1 + 7796314 T e chlSab2.chr15 437981 14 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 111 + 123690457 T a score=1500.000000 s hg38.chr3_KI270779v1_alt 142800 1 + 205312 G s panTro5.chr3 2479061 1 - 202621043 G i panTro5.chr3 T 4472 C 0 s panPan2.chrUn_NW_014024201v1 107483 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50547 1 - 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 953813 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476580 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562814 0 + 19675229 C e colAng1.NW_012118932v1 472368 1 + 7796314 T e manLeu1.NW_012102020v1 609111 0 - 1977891 C e chlSab2.chr15 437981 14 - 91754291 I e cerAty1.NW_012004056v1 502808 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483069 0 + 204787373 C e nomLeu3.chr11 120907031 111 + 123690457 T a score=30425.000000 s hg38.chr3_KI270779v1_alt 142801 9 + 205312 GTGTAGACA s panTro5.chr3 2479062 9 - 202621043 GTGTAGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107484 9 + 190779 GTGTAGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50548 9 - 55620 GTGTAGACA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483069 9 + 204787373 GTGTAGACA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562814 9 + 19675229 GTGTAGACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502808 9 + 16847902 GTGTAGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 437995 9 - 91754291 GTGTAGACA i chlSab2.chr15 I 14 C 0 s manLeu1.NW_012102020v1 609111 9 - 1977891 GTGTAGACA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953814 8 - 74750902 GTGGAGAC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476581 8 + 17725628 GTAGAGAA- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472368 1 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 111 + 123690457 T a score=120915.000000 s hg38.chr3_KI270779v1_alt 142810 29 + 205312 CCCTCTCTCCATCGCTCAGGGGTGTAGAC-- s panTro5.chr3 2479071 29 - 202621043 CCCTCTCTCCATCGCTCAGGGGTGTAGAC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107493 29 + 190779 CCCTCTCTCCATCGCTCAGAGGTGTAGAC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50557 29 - 55620 CCCTCTCTCCATCGCTCAGGGGTGTAGAC-- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483078 29 + 204787373 ACCTCTCTCCATCACTCAGGGGTGTAGAC-- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562823 29 + 19675229 ACCTCTCTCCATCACTAAGGGGTGTAGAC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502817 29 + 16847902 ACCTCTCTCCATCACTAAGGGGTGTAGAC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438004 29 - 91754291 CTCTCTCTCCATCAGTCACAAGTGTAGAC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609120 29 - 1977891 ACCTCTCTCCATCACTAAGGGGTGTAGAC-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472367 29 + 7796314 CCCTCTCTCCATCACTCAGGGGTGTAGAC-- i colAng1.NW_012118932v1 T 1 C 0 s calJac3.chr17 953822 30 - 74750902 CTCTCTCTCCATCACTCAGAGG-GTGGAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476589 29 + 17725628 CTCTGTCTCCTTTGCTCAGGGG-GTGGAGA- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 111 + 123690457 T a score=21730.000000 s hg38.chr3_KI270779v1_alt 142839 5 + 205312 ACCCT s panTro5.chr3 2479100 5 - 202621043 ACCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107522 5 + 190779 ACCCT i panPan2.chrUn_NW_014024201v1 C 0 T 119 s gorGor5.CYUI01001831v1 50586 5 - 55620 ACCCT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483107 5 + 204787373 ACCCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562852 5 + 19675229 ACCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502846 5 + 16847902 ACCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438033 5 - 91754291 AGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609149 5 - 1977891 ACCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472396 5 + 7796314 ACCCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 476618 5 + 17725628 GCTCT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e calJac3.chr17 953852 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 111 + 123690457 T a score=20859.000000 s hg38.chr3_KI270779v1_alt 142844 7 + 205312 CCCTTCA------- s panTro5.chr3 2479105 7 - 202621043 CCCTTCA------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107408 7 + 190779 CTCTCCA------- i panPan2.chrUn_NW_014024201v1 T 119 C 0 s gorGor5.CYUI01001831v1 50591 7 - 55620 CTCTCCA------- i gorGor5.CYUI01001831v1 C 0 I 209 s rheMac8.chr2 202483112 7 + 204787373 CTCTCCA------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562857 7 + 19675229 CTCTCCA------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502851 7 + 16847902 CTCTCCA------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438038 7 - 91754291 ATCTCCA------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609154 7 - 1977891 CTCTCCA------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472401 7 + 7796314 CTCTCCA------- i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 476623 12 + 17725628 --CTCTATGACTCA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e calJac3.chr17 953852 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 111 + 123690457 T a score=31246.000000 s hg38.chr3_KI270779v1_alt 142851 12 + 205312 TCGCTCA---G-GGGT s panTro5.chr3 2479112 12 - 202621043 TCGCTCA---G-GGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107415 12 + 190779 TCGCTCA---G-GGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50807 12 - 55620 TCGCTCA---G-GGGT i gorGor5.CYUI01001831v1 I 209 C 0 s rheMac8.chr2 202483119 12 + 204787373 TTACTCA---G-GGGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562864 13 + 19675229 TAACTCA--GG-GGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502858 12 + 16847902 TCACTCA---G-CGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438045 12 - 91754291 TCACTCA---G-GGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609161 12 - 1977891 TCACTCA---G-GGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472408 13 + 7796314 TCCCTCA---GTGGCT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 476635 15 + 17725628 TCCCTTGGTGG-GGGT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e calJac3.chr17 953852 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 111 + 123690457 T a score=13213.000000 s hg38.chr3_KI270779v1_alt 142863 4 + 205312 GTAG s panTro5.chr3 2479124 4 - 202621043 GTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107427 4 + 190779 GCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50819 4 - 55620 GTGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906920 4 + 123690457 GTGG i nomLeu3.chr11 T 111 C 0 s rheMac8.chr2 202483131 4 + 204787373 ATAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562877 4 + 19675229 ATAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502870 4 + 16847902 GTAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438057 4 - 91754291 GTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609173 4 - 1977891 GTAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472421 4 + 7796314 GGAG i colAng1.NW_012118932v1 C 0 T 59 s saiBol1.JH378146 476650 4 + 17725628 GCAG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e calJac3.chr17 953852 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M a score=6822.000000 s hg38.chr3_KI270779v1_alt 142867 3 + 205312 ACA s panTro5.chr3 2479128 3 - 202621043 ACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107431 3 + 190779 ACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50823 3 - 55620 ACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906924 2 + 123690457 A-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483135 3 + 204787373 ACA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562881 3 + 19675229 ACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502874 3 + 16847902 ACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438061 3 - 91754291 ACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609177 3 - 1977891 ACA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e calJac3.chr17 953852 0 - 74750902 C e saiBol1.JH378146 476654 0 + 17725628 C e colAng1.NW_012118932v1 472425 59 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=77806.000000 s hg38.chr3_KI270779v1_alt 142870 19 + 205312 CCCTCCCTTCATCGCTCAG s panTro5.chr3 2479131 19 - 202621043 CCCTCTCTCCATCGCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107434 19 + 190779 CCCCATCTCCATCACTTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50826 19 - 55620 CCCTCCCTCCGTCGCTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906926 19 + 123690457 CCCTCCTTCCATCACTCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483138 17 + 204787373 CC--CTCTCCATCACTCAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562884 17 + 19675229 CC--CTCTCCATCACTCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502877 19 + 16847902 CCCTCTCTCCATCACTAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438064 17 - 91754291 CC--CTCTCCATCACTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609180 19 - 1977891 CCCTCTCTCCATCGCTCAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953852 19 - 74750902 CTCTCTCTCCATGGCTCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476654 19 + 17725628 CCCTCTCTCCATCGCTGAG i saiBol1.JH378146 C 0 T 277 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472425 59 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=16770.000000 s hg38.chr3_KI270779v1_alt 142889 10 + 205312 -G-----------------------------GGTGTAGAC s panTro5.chr3 2479150 10 - 202621043 -G-----------------------------GGTATAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107453 39 + 190779 -GGGGTGGAAACCTCTCTCTATCGCTCAGCAGGTGTAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50845 10 - 55620 -G-----------------------------GGTGTGGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906945 11 + 123690457 -GG----------------------------AGCGGAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483155 10 + 204787373 -C-----------------------------GGTGTAGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562901 10 + 19675229 -C-----------------------------GGTGTAGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502896 10 + 16847902 -G-----------------------------GGAGTAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438081 10 - 91754291 -C-----------------------------GGTGTAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609199 10 - 1977891 -G-----------------------------GGTGTAGAC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953871 11 - 74750902 GG-----------------------------GGTGGAGAT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e colAng1.NW_012118932v1 472425 59 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=12387.000000 s hg38.chr3_KI270779v1_alt 142899 3 + 205312 ACC s panTro5.chr3 2479160 3 - 202621043 ACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107492 3 + 190779 ACC i panPan2.chrUn_NW_014024201v1 C 0 T 119 s gorGor5.CYUI01001831v1 50855 3 - 55620 ACC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483165 3 + 204787373 ACC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562911 3 + 19675229 ACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502906 3 + 16847902 ACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438091 3 - 91754291 ACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609209 3 - 1977891 ACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472366 3 + 7796314 GCC i colAng1.NW_012118932v1 T 59 C 0 s calJac3.chr17 953882 2 - 74750902 -CT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906956 0 + 123690457 C a score=198957.000000 s hg38.chr3_KI270779v1_alt 142902 41 + 205312 CTCCCTTCATCGCTCAGGGGTGTAGACACCCTCTCTCCATC s panTro5.chr3 2479163 41 - 202621043 CTCTCTCCATCGCTCAGGGGTGTAGACACCCTCTCTCCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107376 41 + 190779 CTCCCTCCATCGCTCAGGGGTGTAGACACCCTCTCTCCATC i panPan2.chrUn_NW_014024201v1 T 119 C 0 s gorGor5.CYUI01001831v1 50858 41 - 55620 CTCCCTCCGTCGCTCAGGGGTGTGGACACCCTCCCTCCGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906956 41 + 123690457 CTCCCTCCGTTGTTCAGGGGTGTAGACACCCCCTCTCCATC i nomLeu3.chr11 C 0 T 86 s rheMac8.chr2 202483168 41 + 204787373 CTCTCTCCATCACTAAGGGGTGTAGACACCCTCTCTCCATC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562914 41 + 19675229 CTCTCTCCATCACTAAGGGGTGTAGACACCCTCTCTCCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502909 41 + 16847902 CTCTCTCCATCACTCAGGGCTGTAGACACCCTCTCTCCATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438094 39 - 91754291 CTCTCTCCATCACTCAGGGCTATAGACACC--CTCTCCATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609212 41 - 1977891 CTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472369 41 + 7796314 CTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953884 39 - 74750902 CTCTTTCCATGGCTCAGGGG-GTGGAGACT-TCTCTCCATT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=17925.000000 s hg38.chr3_KI270779v1_alt 142943 4 + 205312 GCTC s panTro5.chr3 2479204 4 - 202621043 GCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107417 4 + 190779 GCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50899 4 - 55620 GCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906911 4 + 123690457 GCTC i nomLeu3.chr11 T 86 C 0 s rheMac8.chr2 202483209 4 + 204787373 ACTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562955 4 + 19675229 ACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502950 4 + 16847902 ACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438133 4 - 91754291 ACTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609253 4 - 1977891 ACTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472410 4 + 7796314 CCTC i colAng1.NW_012118932v1 C 0 I 28 s calJac3.chr17 953923 4 - 74750902 GTTC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=107733.000000 s hg38.chr3_KI270779v1_alt 142947 32 + 205312 A-GGGGTGTAGACACCCTCCCTTCATCGCTCA-G s panTro5.chr3 2479208 32 - 202621043 A-GGGGTGTAGACACCCTCTCTCCATCGCTCA-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107421 32 + 190779 A-GGGGTGCAGACACCCCATCTCCATCACTTA-G i panPan2.chrUn_NW_014024201v1 C 0 I 29 s gorGor5.CYUI01001831v1 50903 32 - 55620 A-GGGGTGTGGACACCCTCTCTCCGTCGCTCA-G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906915 30 + 123690457 A-GGGG-GTGGA-GCCCTCCTTCCATCACTCA-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483213 30 + 204787373 A-GGGCTGTAGACACC--CTCTCCATCACTCA-G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562959 33 + 19675229 A-GGGCTGTAGACACCCTCTCTCCATAACTCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502954 31 + 16847902 AGGGGGTGTAGACATC--CTCTCCATCACTCA-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438137 32 - 91754291 A-GCGGTGTAGACACCCTCTCTCCATCACTCA-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609257 32 - 1977891 A-AGGGTGTAGACACCCTCTCTCCATCCCTCG-G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472442 32 + 7796314 A-GCAGTGTAGACAACGTCTCTCCATCACTAA-G i colAng1.NW_012118932v1 I 28 C 0 s calJac3.chr17 953927 30 - 74750902 --AGGGGGTGGAGATC-TCTCTCCATCTCTCG-G i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=33173.000000 s hg38.chr3_KI270779v1_alt 142979 11 + 205312 -GGGTGTAGACA s panTro5.chr3 2479240 11 - 202621043 -GGGTGTAGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107482 11 + 190779 -AGGTGTAGACA i panPan2.chrUn_NW_014024201v1 I 29 C 0 s gorGor5.CYUI01001831v1 50935 11 - 55620 -GGGTGTGGACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906945 9 + 123690457 --GGAGCGGA-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483243 11 + 204787373 -GGGTGTAGACA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562992 11 + 19675229 -GGGTGTAGACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502985 11 + 16847902 -CAGTGTAGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438169 11 - 91754291 -GGCTATAGACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609289 11 - 1977891 -GGGTGTAGACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472474 11 + 7796314 -GGGTGTAGACA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953957 10 - 74750902 GGGGTGGAGA-- i calJac3.chr17 C 0 T 115 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=47585.000000 s hg38.chr3_KI270779v1_alt 142990 13 + 205312 CCCTCCCTTCATC s panTro5.chr3 2479251 13 - 202621043 CCCTCCCTTCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107493 13 + 190779 CCCTCTCTCCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50946 13 - 55620 CCCTCCCTTCGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906954 13 + 123690457 CCCTCCCTCCGTT i nomLeu3.chr11 C 0 T 56 s rheMac8.chr2 202483254 13 + 204787373 CCCTCTCTCCATC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563003 11 + 19675229 TC--CTCTCCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 502996 13 + 16847902 ACCTCTCTCCATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438180 11 - 91754291 CC--CTCTCCATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609300 13 - 1977891 CCCTCTCTCCATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472485 13 + 7796314 CCCTCTCTCCATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953852 13 - 74750902 CTCTCTCTCCATG i calJac3.chr17 T 115 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=39023.000000 s hg38.chr3_KI270779v1_alt 143003 11 + 205312 GCTCAGGGG-TG s panTro5.chr3 2479264 11 - 202621043 GCTCAGGGG-TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107506 11 + 190779 GCTCAGAGG-TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50959 11 - 55620 GCTCAGGGG-TG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906911 10 + 123690457 GCTCAGGGG--G i nomLeu3.chr11 T 56 C 0 s rheMac8.chr2 202483267 11 + 204787373 ACTCAGGGC-TG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563014 11 + 19675229 ACTCAGCGG-TG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503009 11 + 16847902 ACTAAGGGG-TA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 438191 11 - 91754291 ACTCAGCGG-TG i chlSab2.chr15 C 0 T 6921 s manLeu1.NW_012102020v1 609313 11 - 1977891 ACTCAGGGC-TG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472498 11 + 7796314 CCTCGGGGG-TG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953865 12 - 74750902 GCTCAGGGGGTG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=25954.000000 s hg38.chr3_KI270779v1_alt 143014 8 + 205312 TAGACACC- s panTro5.chr3 2479275 8 - 202621043 TAGACACC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107517 8 + 190779 TAGACACC- i panPan2.chrUn_NW_014024201v1 C 0 T 149 s gorGor5.CYUI01001831v1 50970 8 - 55620 TAGACACC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906921 7 + 123690457 TGGAGCC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483278 8 + 204787373 TAGACACC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563025 8 + 19675229 TAGACAAC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503020 8 + 16847902 TAGACACC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431281 8 - 91754291 TAGACACC- i chlSab2.chr15 T 6921 C 0 s manLeu1.NW_012102020v1 609324 8 - 1977891 TAGACACC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472509 8 + 7796314 TAGACACC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953877 7 - 74750902 --GAGATCT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=9195.000000 s hg38.chr3_KI270779v1_alt 143022 2 + 205312 CT s panTro5.chr3 2479283 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107376 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 T 149 C 0 s gorGor5.CYUI01001831v1 50978 2 - 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906928 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 563033 2 + 19675229 TT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503028 2 + 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431289 2 - 91754291 CT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609332 2 - 1977891 CT i manLeu1.NW_012102020v1 C 0 T 328 s colAng1.NW_012118932v1 472517 2 + 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953884 2 - 74750902 CT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483286 0 + 204787373 C a score=26752.000000 s hg38.chr3_KI270779v1_alt 143024 5 + 205312 CTCTC s panTro5.chr3 2479285 5 - 202621043 CTCTC i panTro5.chr3 C 0 I 4292 s panPan2.chrUn_NW_014024201v1 107378 5 + 190779 CCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50980 5 - 55620 CTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906930 5 + 123690457 CCTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483286 5 + 204787373 CTCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563035 5 + 19675229 CTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503030 5 + 16847902 CTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431291 5 - 91754291 CTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609006 5 - 1977891 CTCTC i manLeu1.NW_012102020v1 T 328 C 0 s colAng1.NW_012118932v1 472519 5 + 7796314 CTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953886 5 - 74750902 CTTTC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=60546.000000 s hg38.chr3_KI270779v1_alt 143029 15 + 205312 CACCGCTCAGGGGTG s panTro5.chr3 2483582 15 - 202621043 CATCGCTCAGGGGTG i panTro5.chr3 I 4292 C 0 s panPan2.chrUn_NW_014024201v1 107383 15 + 190779 CATCGCTCAGGGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 50985 15 - 55620 CGTCTCTCAGGGGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906935 14 + 123690457 CATCACTCAGGGA-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483291 15 + 204787373 CATCACTCAGGGGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563040 15 + 19675229 CATCACTAAGGGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503035 15 + 16847902 CATCACTCAGCAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431296 15 - 91754291 CATCACTCAGGGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609011 15 - 1977891 CATCACTCAGGAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472524 15 + 7796314 CATCGCTCGGGGGTG i colAng1.NW_012118932v1 C 0 T 261 s calJac3.chr17 953891 14 - 74750902 CATGGCTCAGGGGG- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=17108.000000 s hg38.chr3_KI270779v1_alt 143044 4 + 205312 TAGA s panTro5.chr3 2483597 4 - 202621043 TAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107398 4 + 190779 TAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51000 4 - 55620 TAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906949 4 + 123690457 CGGA i nomLeu3.chr11 C 0 T 9758 s rheMac8.chr2 202483306 4 + 204787373 TAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563055 4 + 19675229 TAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503050 4 + 16847902 TAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431311 4 - 91754291 TAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609026 4 - 1977891 TAGA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953905 4 - 74750902 TGGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=6570.000000 s hg38.chr3_KI270779v1_alt 143048 2 + 205312 CA s panTro5.chr3 2483601 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107402 2 + 190779 CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51004 2 - 55620 CA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483310 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563059 2 + 19675229 CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503054 2 + 16847902 CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431315 2 - 91754291 CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609030 2 - 1977891 CA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953909 2 - 74750902 GA i calJac3.chr17 C 0 T 59 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=32247.000000 s hg38.chr3_KI270779v1_alt 143050 9 + 205312 CCCTCTCTC s panTro5.chr3 2483603 9 - 202621043 CCCTCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107404 9 + 190779 CCCTCTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51006 7 - 55620 CC--CTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483312 9 + 204787373 CCCTCTCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563061 9 + 19675229 CCCTCTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503056 9 + 16847902 CCCTCTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431317 9 - 91754291 CCCTCTCTC i chlSab2.chr15 C 0 I 180 s manLeu1.NW_012102020v1 609032 9 - 1977891 CCCTCTCTC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953852 9 - 74750902 CTCTCTCTC i calJac3.chr17 T 59 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=11046.000000 s hg38.chr3_KI270779v1_alt 143059 4 + 205312 CATC s panTro5.chr3 2483612 4 - 202621043 CATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107413 4 + 190779 CATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51013 4 - 55620 CATC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483321 4 + 204787373 CATT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563070 4 + 19675229 CATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503065 4 + 16847902 CATC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609041 4 - 1977891 CATC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953861 4 - 74750902 CATG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 277 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e chlSab2.chr15 431326 180 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=6201.000000 s hg38.chr3_KI270779v1_alt 143063 7 + 205312 GCTCAGG- s panTro5.chr3 2483616 7 - 202621043 GCTCAGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107417 7 + 190779 GCTCAGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51017 7 - 55620 GCTCAGG- i gorGor5.CYUI01001831v1 C 0 I 150 s rheMac8.chr2 202483325 7 + 204787373 ACTCAGG- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563074 7 + 19675229 ACTCAGC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503069 7 + 16847902 ACTAAGG- i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609045 7 - 1977891 AGTCACA- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953865 8 - 74750902 GCTCAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476396 7 + 17725628 GCTC-GAG i saiBol1.JH378146 T 277 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472539 261 + 7796314 T e chlSab2.chr15 431326 180 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=6895.000000 s hg38.chr3_KI270779v1_alt 143070 2 + 205312 GG s panTro5.chr3 2483623 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107424 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51174 2 - 55620 GG i gorGor5.CYUI01001831v1 I 150 C 0 s rheMac8.chr2 202483332 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563081 2 + 19675229 AG i macNem1.NW_012014355v1 C 0 I 88 s cerAty1.NW_012004056v1 503076 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609052 2 - 1977891 AG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953873 2 - 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476403 2 + 17725628 GG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472539 261 + 7796314 T e chlSab2.chr15 431326 180 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=15873.000000 s hg38.chr3_KI270779v1_alt 143072 13 + 205312 TGCAGA-CACCCCA s panTro5.chr3 2483625 13 - 202621043 TGCAGA-CACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107426 13 + 190779 TGCAGA-CACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51176 13 - 55620 TGTAGA-CACCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483334 13 + 204787373 TGTAGA-CACCCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563171 13 + 19675229 TGTAGA-CTCCGTT i macNem1.NW_012014355v1 I 88 C 0 s cerAty1.NW_012004056v1 503078 11 + 16847902 TGTAGA-CACC--C i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609054 13 - 1977891 TGTAGA-CAGCCTA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953875 12 - 74750902 TGGAGATCTCTC-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476405 11 + 17725628 TGGAGA-CCCCC-- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9151 43 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472539 261 + 7796314 T e chlSab2.chr15 431326 180 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=100880.000000 s hg38.chr3_KI270779v1_alt 143085 41 + 205312 TCTCCATCACTTAGGGG-GTGGAAACCTCTCTCTATCACTCA s panTro5.chr3 2483638 41 - 202621043 TCTCCATCATTTAGCGG-GTGGAAACCTCTCTCCATCGCTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107439 41 + 190779 TCTCCATCACTTAGGGG-GTGGAAACCTCTCTCTATCGCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51189 41 - 55620 CCTTCATCGCTCAGGGGTGTGGACACC-CTCTCCATCGCTCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483347 18 + 204787373 TCTCCATAACTCAGGGG-G----------------------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563184 41 + 19675229 TTTACATCACTCAGGGG-GTGGAGCCCTCTCTCCATCACTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503089 17 + 16847902 TCTCCATCACTCAGGGA------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431506 32 - 91754291 ------TCGCTC---GG-GTGGAAATCTCTTTCCATGGCTCA i chlSab2.chr15 I 180 C 0 s manLeu1.NW_012102020v1 609067 41 - 1977891 TCTCCATCCCTCAGTGG-CTGGAGCCCTGTCTCCATCACTCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 953887 41 - 74750902 TTTCCATGGCTCAGGGG-GTGGAGACTTCTCTCCATTGTTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476416 41 + 17725628 TCCCCATCTCTCAGGGG-GTAGAAACCTCTCTCCATCACTCA i saiBol1.JH378146 C 0 T 41 s aotNan1.NW_018492867v1 9194 41 + 21398 TCTCCACCACTCAGGGG-GTGGAGATCTCTCTCCACCACTCA i aotNan1.NW_018492867v1 I 43 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472539 261 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=-4370.000000 s hg38.chr3_KI270779v1_alt 143126 2 + 205312 GC s panTro5.chr3 2483679 1 - 202621043 G- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107480 2 + 190779 GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51230 2 - 55620 GG i gorGor5.CYUI01001831v1 C 0 T 208 s macNem1.NW_012014355v1 563225 1 + 19675229 C- i macNem1.NW_012014355v1 C 0 I 30 s chlSab2.chr15 431538 2 - 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609108 2 - 1977891 GC i manLeu1.NW_012102020v1 C 0 T 104 s calJac3.chr17 953928 2 - 74750902 GG i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 9235 2 + 21398 GC i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e cerAty1.NW_012004056v1 503106 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483365 0 + 204787373 C e nomLeu3.chr11 120906953 9758 + 123690457 T a score=294.000000 s hg38.chr3_KI270779v1_alt 143128 1 + 205312 A s panPan2.chrUn_NW_014024201v1 107482 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macNem1.NW_012014355v1 563256 1 + 19675229 G i macNem1.NW_012014355v1 I 30 C 0 s chlSab2.chr15 431540 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953930 1 - 74750902 G i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 9237 1 + 21398 G i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e manLeu1.NW_012102020v1 609110 104 - 1977891 T e cerAty1.NW_012004056v1 503106 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483365 0 + 204787373 C e nomLeu3.chr11 120906953 9758 + 123690457 T e gorGor5.CYUI01001831v1 51232 208 - 55620 T e panTro5.chr3 2483680 0 - 202621043 C a score=9555.000000 s hg38.chr3_KI270779v1_alt 143129 4 + 205312 GGTG s panTro5.chr3 2483680 4 - 202621043 GGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107483 4 + 190779 GGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51024 4 - 55620 GGTG i gorGor5.CYUI01001831v1 T 208 C 0 s rheMac8.chr2 202483365 2 + 204787373 --TA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563257 4 + 19675229 GCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503106 2 + 16847902 --TG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431541 4 - 91754291 GGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953931 4 - 74750902 GGTG i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 9238 4 + 21398 GGTG i aotNan1.NW_018492867v1 C 0 I 9676 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e manLeu1.NW_012102020v1 609110 104 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=11564.000000 s hg38.chr3_KI270779v1_alt 143133 5 + 205312 TGGAC s panTro5.chr3 2483684 5 - 202621043 TACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107487 5 + 190779 TAGAC i panPan2.chrUn_NW_014024201v1 C 0 T 116 s gorGor5.CYUI01001831v1 51028 5 - 55620 TAGAC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483367 5 + 204787373 TAGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563261 5 + 19675229 TAGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503108 5 + 16847902 TAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431545 5 - 91754291 TAGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953935 5 - 74750902 GAGAT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e colAng1.NW_012118932v1 472539 261 + 7796314 T e manLeu1.NW_012102020v1 609110 104 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=8148.000000 s hg38.chr3_KI270779v1_alt 143138 3 + 205312 ACC s panTro5.chr3 2483689 3 - 202621043 ACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51033 3 - 55620 ACC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483372 3 + 204787373 ACC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563266 3 + 19675229 ACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503113 3 + 16847902 ACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431550 3 - 91754291 ACC i chlSab2.chr15 C 0 T 84 s colAng1.NW_012118932v1 472278 3 + 7796314 ACC i colAng1.NW_012118932v1 T 261 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107492 116 + 190779 T e calJac3.chr17 953940 0 - 74750902 C e saiBol1.JH378146 476457 41 + 17725628 T e manLeu1.NW_012102020v1 609110 104 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=3913.000000 s hg38.chr3_KI270779v1_alt 143141 2 + 205312 CT s panTro5.chr3 2483692 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107376 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 T 116 C 0 s gorGor5.CYUI01001831v1 51036 2 - 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483375 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563269 2 + 19675229 CT i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 472281 2 + 7796314 CG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953940 2 - 74750902 CT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e manLeu1.NW_012102020v1 609110 104 - 1977891 T e chlSab2.chr15 431553 84 - 91754291 T e cerAty1.NW_012004056v1 503116 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=92122.000000 s hg38.chr3_KI270779v1_alt 143143 22 + 205312 CTCTCCATCCCTCAGGGGTGTA s panTro5.chr3 2483694 22 - 202621043 CTCTCCATCATTCAGGGGTGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107378 22 + 190779 CCCTCCATCGCTCAGGGGTGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51038 22 - 55620 CCCTTCATTGCTCAGGGGTGTA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483377 22 + 204787373 CTCTCCATCACTCAGGGGTGTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563271 22 + 19675229 CTCTCCATCCCTCAGGGGTGTA i macNem1.NW_012014355v1 C 0 T 355 s cerAty1.NW_012004056v1 503116 22 + 16847902 CTCTCCATCACTCAGGGGTGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431469 22 - 91754291 CTCTCCATCGCTCAGGGGTGTA i chlSab2.chr15 T 84 C 0 s manLeu1.NW_012102020v1 609006 22 - 1977891 CTCTCCATCACTCAGGAGTGTA i manLeu1.NW_012102020v1 T 104 C 0 s colAng1.NW_012118932v1 472283 22 + 7796314 CTCTCCATCTCTCAGGAGTGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953942 21 - 74750902 CTCTCCATCTCTCGGGGG-GTG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=38760.000000 s hg38.chr3_KI270779v1_alt 143165 9 + 205312 GACACCCTC s panTro5.chr3 2483716 9 - 202621043 GACACCCTC i panTro5.chr3 C 0 T 4435 s panPan2.chrUn_NW_014024201v1 107400 9 + 190779 GACACCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51060 9 - 55620 GACACCCTT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483399 9 + 204787373 GACACCCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562938 9 + 19675229 GACACCCTC i macNem1.NW_012014355v1 T 355 C 0 s cerAty1.NW_012004056v1 503138 9 + 16847902 GACAACCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431491 9 - 91754291 GACACCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609028 9 - 1977891 GACACCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472305 9 + 7796314 GACACCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953963 9 - 74750902 GAGATTCTT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=8427.000000 s hg38.chr3_KI270779v1_alt 143174 4 + 205312 CCTT- s panPan2.chrUn_NW_014024201v1 107409 4 + 190779 TCTC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51069 4 - 55620 CCTT- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483408 4 + 204787373 TCTC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562947 4 + 19675229 TCTC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503147 4 + 16847902 TCTC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431500 4 - 91754291 TCTC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609037 4 - 1977891 TCTC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472314 4 + 7796314 TCTC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953972 4 - 74750902 -CTCT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T e panTro5.chr3 2483725 4435 - 202621043 T a score=26720.000000 s hg38.chr3_KI270779v1_alt 143178 8 + 205312 CATCGCTC s panTro5.chr3 2479290 8 - 202621043 CATCGCTC i panTro5.chr3 T 4435 C 0 s panPan2.chrUn_NW_014024201v1 107413 8 + 190779 CATCGCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51073 8 - 55620 CATCGCTC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483412 8 + 204787373 CATCACTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562951 8 + 19675229 CATCACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503151 8 + 16847902 CATCACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431504 8 - 91754291 CATCGCTC i chlSab2.chr15 C 0 T 178 s manLeu1.NW_012102020v1 609041 8 - 1977891 CATCAGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472318 8 + 7796314 CATCAGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 953976 1 - 74750902 -------C i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476457 41 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=42074.000000 s hg38.chr3_KI270779v1_alt 143186 18 + 205312 AGGGGTGCAGACACCCCA s panTro5.chr3 2479298 18 - 202621043 AGGGGTGCAGATACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107421 18 + 190779 AGGGGTGCAGACACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51081 18 - 55620 AGGGGTATAGACACCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483420 16 + 204787373 AGGGCTGTAGACACC--C i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562959 18 + 19675229 AGGGCTGTAGACACCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503159 18 + 16847902 AGGGGTGTAGACTCCGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431334 18 - 91754291 AGGGGTGTAGACACCCTC i chlSab2.chr15 T 178 C 0 s manLeu1.NW_012102020v1 609049 18 - 1977891 ACAAGTGTAGACAGCCTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472326 18 + 7796314 AGAAGTGTAGACAGCCTA i colAng1.NW_012118932v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 9242 9676 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e calJac3.chr17 953977 0 - 74750902 C e saiBol1.JH378146 476457 41 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9758 + 123690457 T a score=81942.000000 s hg38.chr3_KI270779v1_alt 143204 12 + 205312 TCTCCATCACTT s panTro5.chr3 2479316 12 - 202621043 TCTCCATCACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107439 12 + 190779 TCTCCATCACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51099 12 - 55620 TCTCCATCGCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897195 12 + 123690457 TCTCCATCACTT i nomLeu3.chr11 T 9758 C 0 s rheMac8.chr2 202483436 12 + 204787373 TCTCCATCACTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 562977 12 + 19675229 TCTCCATAACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503177 12 + 16847902 TTTACATCACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431352 12 - 91754291 TCTCCATCACTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609067 12 - 1977891 TCTCCATCCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472344 12 + 7796314 TCTCCATCATTC i colAng1.NW_012118932v1 C 0 I 58 s calJac3.chr17 953977 12 - 74750902 TCTCCATCACTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476416 12 + 17725628 TCCCCATCTCTC i saiBol1.JH378146 T 41 C 0 s aotNan1.NW_018492867v1 18918 12 + 21398 TCTCCATCACTC i aotNan1.NW_018492867v1 I 9676 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=39536.000000 s hg38.chr3_KI270779v1_alt 143216 5 + 205312 AGGGG s panTro5.chr3 2479328 5 - 202621043 AGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107451 5 + 190779 AGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51111 5 - 55620 AGGGG i gorGor5.CYUI01001831v1 C 0 I 1 s nomLeu3.chr11 120897207 5 + 123690457 AGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483448 5 + 204787373 AGGGG i rheMac8.chr2 C 0 I 2 s macNem1.NW_012014355v1 562989 5 + 19675229 AGGGG i macNem1.NW_012014355v1 C 0 I 89 s cerAty1.NW_012004056v1 503189 5 + 16847902 AGGGG i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 431364 5 - 91754291 AGGGG i chlSab2.chr15 C 0 T 86 s manLeu1.NW_012102020v1 609079 5 - 1977891 AGTGG i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 472414 5 + 7796314 AGTGG i colAng1.NW_012118932v1 I 58 I 1 s calJac3.chr17 953989 5 - 74750902 AGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476428 5 + 17725628 AGGGG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 18930 5 + 21398 AGGGG i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=1883.000000 s hg38.chr3_KI270779v1_alt 143221 1 + 205312 G s panTro5.chr3 2479333 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107456 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51117 1 - 55620 G i gorGor5.CYUI01001831v1 I 1 C 0 s nomLeu3.chr11 120897212 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 953994 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476433 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 18935 1 + 21398 A i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562994 89 + 19675229 I e colAng1.NW_012118932v1 472419 1 + 7796314 I e manLeu1.NW_012102020v1 609084 1 - 1977891 I e chlSab2.chr15 431369 86 - 91754291 T e cerAty1.NW_012004056v1 503194 1 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483453 2 + 204787373 I a score=21264.000000 s hg38.chr3_KI270779v1_alt 143222 10 + 205312 TGGA-AACCTC s panTro5.chr3 2479334 10 - 202621043 TGGT-AACCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107457 10 + 190779 TGGA-AACCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51118 11 - 55620 TAGACACCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897213 10 + 123690457 TGGA-AACCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483455 11 + 204787373 TAGACACCCTC i rheMac8.chr2 I 2 C 0 s cerAty1.NW_012004056v1 503195 4 + 16847902 TGGA------- i cerAty1.NW_012004056v1 I 1 C 0 s manLeu1.NW_012102020v1 609085 10 - 1977891 TGGA-GCCCTG i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 472420 10 + 7796314 TGGA-GCCCTG i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 953995 10 - 74750902 TGGA-GATCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476434 10 + 17725628 TAGA-AACCTC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018492867v1 18936 10 + 21398 TGGA-GATCTC i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562994 89 + 19675229 I e chlSab2.chr15 431369 86 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M a score=48000.000000 s hg38.chr3_KI270779v1_alt 143232 16 + 205312 TCTCTATCACTCAGCA s panTro5.chr3 2479344 16 - 202621043 TCTCTATCGCTCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107467 16 + 190779 TCTCTATCGCTCAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51129 15 - 55620 TCTCCATCGCTCAG-G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897223 16 + 123690457 TCTCCATCGCTCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483466 16 + 204787373 TCTCCATCACTCAGGG i rheMac8.chr2 C 0 C 0 s manLeu1.NW_012102020v1 609095 16 - 1977891 TCTCCATCACTCAGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472430 16 + 7796314 TCTCCATCACTCAGCA i colAng1.NW_012118932v1 C 0 T 78 s calJac3.chr17 954005 16 - 74750902 TCTCCATCTCTCAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476444 16 + 17725628 TCTCCATCACTCATGG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562994 89 + 19675229 I e chlSab2.chr15 431369 86 - 91754291 T e cerAty1.NW_012004056v1 503199 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M a score=5280.000000 s hg38.chr3_KI270779v1_alt 143248 2 + 205312 GG s panTro5.chr3 2479360 2 - 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107483 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51144 2 - 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897239 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483482 1 + 204787373 -G i rheMac8.chr2 C 0 C 0 s manLeu1.NW_012102020v1 609111 1 - 1977891 -G i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954021 2 - 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476460 2 + 17725628 GG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 562994 89 + 19675229 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e chlSab2.chr15 431369 86 - 91754291 T e cerAty1.NW_012004056v1 503199 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M a score=10311.000000 s hg38.chr3_KI270779v1_alt 143250 4 + 205312 TGTG s panTro5.chr3 2479362 4 - 202621043 TGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107485 4 + 190779 TGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51146 4 - 55620 TATA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897241 4 + 123690457 TGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483483 4 + 204787373 TGTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563083 4 + 19675229 TGTA i macNem1.NW_012014355v1 I 89 C 0 s manLeu1.NW_012102020v1 609112 4 - 1977891 TGTA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954023 4 - 74750902 TAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476462 4 + 17725628 TGGA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e chlSab2.chr15 431369 86 - 91754291 T e cerAty1.NW_012004056v1 503199 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M a score=16081.000000 s hg38.chr3_KI270779v1_alt 143254 7 + 205312 GACACCC s panTro5.chr3 2479366 7 - 202621043 GACACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107489 7 + 190779 GACACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51150 7 - 55620 GACACCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120897245 7 + 123690457 GACACCC i nomLeu3.chr11 C 0 I 9659 s rheMac8.chr2 202483487 7 + 204787373 GACACCC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563087 7 + 19675229 GACACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503199 4 + 16847902 ---GCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431283 7 - 91754291 GACACCC i chlSab2.chr15 T 86 C 0 s manLeu1.NW_012102020v1 609116 7 - 1977891 GACAACC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954027 6 - 74750902 GATGTC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476466 4 + 17725628 GA--CC- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=102434.000000 s hg38.chr3_KI270779v1_alt 143261 27 + 205312 TCTCTCCATCCCTCAGGGGTGTAGACA s panTro5.chr3 2479373 27 - 202621043 TCTCCCCATCGTTCAGGGGTGTAGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107496 27 + 190779 TCTCTCCATCGCTCAGAGGTGTAGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51157 27 - 55620 TCTCTCCACCGCTCAGGGGTGTAGACA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483494 27 + 204787373 TCTCTCCATCACTCAGGGCTGTAGACA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563094 27 + 19675229 TCTCTCCATCACTAAGGGGTGTAGACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503203 27 + 16847902 TCTCTCCATCACTCTGGGGTGTAGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431290 27 - 91754291 TCTCTCCATCACTCAGGGGTGTAGACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609123 27 - 1977891 TCTCTCCATCACTAAGGGGTGTAGACA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954033 26 - 74750902 TCTCTCCATCTCTCAGGGG-GTGGAGC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 476470 26 + 17725628 TCTCTCCACTGCTCAGGGG-GTGGAGA i saiBol1.JH378146 C 0 I 33 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897252 9659 + 123690457 I a score=59935.000000 s hg38.chr3_KI270779v1_alt 143288 20 + 205312 CCCTCCCTTCATCGCTCAGG s panTro5.chr3 2479400 20 - 202621043 CCCTCCCTCCATCGCTCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107523 20 + 190779 CCCTCTCTCTATCGCTCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51184 20 - 55620 CCCTCCCTTCATCGCTCAGG i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483521 18 + 204787373 CCCT--CTCCATCACTCAGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563121 18 + 19675229 CCCT--CTCCATCACTCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503230 20 + 16847902 CCCTCGCTCCAACACTCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431317 20 - 91754291 CCCTCTCTCCATCACTCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609150 20 - 1977891 CCCTCTCTCCATCACTCAGG i manLeu1.NW_012102020v1 C 0 T 60 s calJac3.chr17 954060 20 - 74750902 GTCTCTCTCCATCACTCAGG i calJac3.chr17 I 1 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476496 33 + 17725628 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897252 9659 + 123690457 I a score=23424.000000 s hg38.chr3_KI270779v1_alt 143308 8 + 205312 GGTGTAGA s panTro5.chr3 2479420 8 - 202621043 GGTGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107543 8 + 190779 GGTGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51204 8 - 55620 GGTGTGGA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483539 8 + 204787373 GGTGTAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563139 8 + 19675229 GGTGTAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503250 8 + 16847902 ATTTTAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431337 8 - 91754291 GGTGTAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609110 8 - 1977891 GGTGTAGA i manLeu1.NW_012102020v1 T 60 C 0 s calJac3.chr17 954080 7 - 74750902 -GGGTGGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476496 33 + 17725628 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897252 9659 + 123690457 I a score=4240.000000 s hg38.chr3_KI270779v1_alt 143316 3 + 205312 CAT s panTro5.chr3 2479428 3 - 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107551 3 + 190779 CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51212 3 - 55620 CAC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483547 3 + 204787373 CAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563147 3 + 19675229 CAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503258 3 + 16847902 CAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431345 3 - 91754291 CAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609118 3 - 1977891 CAA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954087 2 - 74750902 -GA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476529 3 + 17725628 CTT i saiBol1.JH378146 I 33 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472446 78 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897252 9659 + 123690457 I a score=58059.000000 s hg38.chr3_KI270779v1_alt 143319 12 + 205312 CCTCTCTCCATC s panTro5.chr3 2479431 12 - 202621043 CCTCCCTCCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107554 12 + 190779 CCTCTCTCCATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51215 10 - 55620 CCT--CTCCATC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483550 12 + 204787373 CCTCTCTCCATC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563150 12 + 19675229 CCTCTCTCCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503261 10 + 16847902 C--CTCTCCATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431348 12 - 91754291 CCTCTCTCCATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609121 12 - 1977891 CCTCTCTCCATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472368 12 + 7796314 CCTCTCTCCATC i colAng1.NW_012118932v1 T 78 C 0 s calJac3.chr17 954089 12 - 74750902 TCTCTCTCCATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476532 12 + 17725628 TCTCTCTCCATC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120897252 9659 + 123690457 I a score=40121.000000 s hg38.chr3_KI270779v1_alt 143331 11 + 205312 GCTCAGGGGTG s panTro5.chr3 2479443 11 - 202621043 GCTCAGGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107566 11 + 190779 GATCAGGGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51225 11 - 55620 GCTCAGGGGTA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906911 10 + 123690457 GCTCAGGGG-G i nomLeu3.chr11 I 9659 C 0 s rheMac8.chr2 202483562 11 + 204787373 ACTCAGGGCTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563162 11 + 19675229 ACTCAGGGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503271 11 + 16847902 ACTCAGGTGCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431360 11 - 91754291 ACTCAGGGGTG i chlSab2.chr15 C 0 T 90 s manLeu1.NW_012102020v1 609133 11 - 1977891 ACTAAGGGGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472380 11 + 7796314 ACTCAGGGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954101 10 - 74750902 ACTCAAGGGG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476544 10 + 17725628 ACTCAGAGGG- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=80847.000000 s hg38.chr3_KI270779v1_alt 143342 19 + 205312 TAGACACCCTCTCTCCATC s panTro5.chr3 2479454 19 - 202621043 TAGACACCTTCCCTCCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107577 19 + 190779 CAGACACCCCATCTCCATC i panPan2.chrUn_NW_014024201v1 C 0 T 179 s gorGor5.CYUI01001831v1 51236 19 - 55620 TAGACATCCTCTCTCCATC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906921 18 + 123690457 TGGA-GCCCTCCTTCCATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483573 19 + 204787373 TAGACACCCTCTCTCCATT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563173 19 + 19675229 TAGACTCCGTTTTTACATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503282 19 + 16847902 TAGACATCATCTCTCCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431281 19 - 91754291 TAGACACCCTCTCTCCATC i chlSab2.chr15 T 90 C 0 s manLeu1.NW_012102020v1 609144 19 - 1977891 TAGACACCCTCTCTCCATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472391 19 + 7796314 TAGACACCCTCTCTCCATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954111 18 - 74750902 TGGA-GCTCTCTCTCCATC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476554 18 + 17725628 TGGA-GATGTCTCTCCATC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=35484.000000 s hg38.chr3_KI270779v1_alt 143361 6 + 205312 GCTCAG s panTro5.chr3 2479473 6 - 202621043 GCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107417 6 + 190779 GCTCAG i panPan2.chrUn_NW_014024201v1 T 179 C 0 s gorGor5.CYUI01001831v1 51255 6 - 55620 ACTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906939 6 + 123690457 ACTCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483592 6 + 204787373 ACTCAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563192 6 + 19675229 ACTCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503301 6 + 16847902 ACTCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431300 6 - 91754291 ACTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609163 6 - 1977891 ACTCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472410 6 + 7796314 CCTCAG i colAng1.NW_012118932v1 C 0 I 28 s calJac3.chr17 954129 6 - 74750902 ACTCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476572 6 + 17725628 TCTCAA i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=124618.000000 s hg38.chr3_KI270779v1_alt 143367 33 + 205312 GGGTGTAGACAC-CCCCTCTCCATCGCTC--AGGGG s panTro5.chr3 2479479 33 - 202621043 GGGTGTAGACAC-CCTCTCTCCATCGCTC--AGGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107423 33 + 190779 GGGTGCAGACAC-CCCATCTCCATCACTT--AGGGG i panPan2.chrUn_NW_014024201v1 C 0 I 26 s gorGor5.CYUI01001831v1 51261 33 - 55620 GGGTGTAGACAC-CCCCTCTCCATCGCTC--AGGGG i gorGor5.CYUI01001831v1 C 0 I 59 s nomLeu3.chr11 120906945 31 + 123690457 GGA-GCGGA-GC-CCTCCCTCCGTTGTTC--AGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483598 34 + 204787373 GGGTGTAGACAC-CCTCTCTCCATAACTC-AGGGGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563198 33 + 19675229 GGG-GTGGA-GC-CCTCTCTCCATCACTCTCAGGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503307 31 + 16847902 GGATGTAGA--C-ACCCTCTCCATCATTC--AGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431306 33 - 91754291 GGGTGTAGACAC-CCTCTCTCCATCACTC--AGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609169 33 - 1977891 GGCTGTAGACAC-CCTCTCTCCATCGCTC--AGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472444 33 + 7796314 CAGTGTAGACAA-CGTCTCTCCATCACTA--AGGGG i colAng1.NW_012118932v1 I 28 C 0 s calJac3.chr17 954135 32 - 74750902 -GGGGTGGAGTG-TCTCTCTCCATCACTC--AGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476578 33 + 17725628 -GGGGTAGAGAACTCTGTCTCCTTTGCTC--AGGGG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M a score=120230.000000 s hg38.chr3_KI270779v1_alt 143400 32 + 205312 TGTAGACACCCCCTCTCCATCGCTCA----------GGGGTG s panTro5.chr3 2479512 32 - 202621043 TGTAGACACCCTCTCTCCATCGCTCA----------GGGGTG i panTro5.chr3 C 0 I 75 s gorGor5.CYUI01001831v1 51353 32 - 55620 TGTAGACACCCCCTCTCCATCGCTTA----------GGGGTG i gorGor5.CYUI01001831v1 I 59 C 0 s nomLeu3.chr11 120906976 31 + 123690457 TGTAGACACCCCCTCTCCATCACTTA----------GGGGG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483632 32 + 204787373 TATAGACACCCTCTCTCCATCACTCA----------GGGGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563231 30 + 19675229 TGTAGACACC--GTCTCCATCACTCA----------GGGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503338 30 + 16847902 TGTAGACACC--GTCTCCATCACTCA----------GGGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431339 32 - 91754291 TGTAGACACCCTCTCTCCATCACTCA----------GGGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609202 32 - 1977891 TGTAGACACCCTCTCTCCATCACTCA----------GGGGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472477 32 + 7796314 TGTAGACACCCTCTCTCCATCCCTCG----------GGGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954167 32 - 74750902 -GTGGAGTGTCTCTCTCCATCACTCA---------GGGGGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476611 40 + 17725628 -GTGGAGAG-CTCTCTCTATGACTCATCCCTTGGTGGGGGTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e macFas5.chr2 83084 14732 + 192460366 M a score=47005.000000 s hg38.chr3_KI270779v1_alt 143432 15 + 205312 TAGACACCCTCTCTC s gorGor5.CYUI01001831v1 51385 15 - 55620 TAGACACCCCCTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907007 14 + 123690457 TGGA-AACCTCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483664 15 + 204787373 TAGACACCCTCTCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563261 15 + 19675229 TAGACACCCTCTCTC i macNem1.NW_012014355v1 C 0 T 110 s cerAty1.NW_012004056v1 503368 15 + 16847902 TAGACACCCTCTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431371 15 - 91754291 TAGACACCCTCTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609234 15 - 1977891 TAGACACCCTCTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472509 15 + 7796314 TAGACACCCTCTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954199 13 - 74750902 --GAGTGTCTCTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476651 12 + 17725628 --CAGC-CCTCTCTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2479544 75 - 202621043 I a score=19667.000000 s hg38.chr3_KI270779v1_alt 143447 8 + 205312 CATCGCTC s panTro5.chr3 2479619 8 - 202621043 CATCGCTC i panTro5.chr3 I 75 C 0 s gorGor5.CYUI01001831v1 51400 8 - 55620 CATCGCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907021 8 + 123690457 CATCGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483679 8 + 204787373 CATCACTC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503383 4 + 16847902 CATC---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431386 8 - 91754291 CATAACTC i chlSab2.chr15 C 0 I 1 s colAng1.NW_012118932v1 472524 8 + 7796314 CATCGCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954212 8 - 74750902 CATCGCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476663 8 + 17725628 CATCGCTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e macNem1.NW_012014355v1 563276 110 + 19675229 T e manLeu1.NW_012102020v1 609249 0 - 1977891 C e macFas5.chr2 83084 14732 + 192460366 M a score=6652.000000 s hg38.chr3_KI270779v1_alt 143455 2 + 205312 AG s panTro5.chr3 2479627 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51408 2 - 55620 AG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907029 2 + 123690457 AG i nomLeu3.chr11 C 0 T 120 s rheMac8.chr2 202483687 2 + 204787373 AG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563166 2 + 19675229 AG i macNem1.NW_012014355v1 T 110 C 0 s chlSab2.chr15 431395 2 - 91754291 GG i chlSab2.chr15 I 1 C 0 s colAng1.NW_012118932v1 472532 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954220 2 - 74750902 AG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 476671 2 + 17725628 AG i saiBol1.JH378146 C 0 T 245 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e manLeu1.NW_012102020v1 609249 0 - 1977891 C e cerAty1.NW_012004056v1 503387 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M a score=8456.000000 s hg38.chr3_KI270779v1_alt 143457 4 + 205312 GGGT s panTro5.chr3 2479629 4 - 202621043 GGGT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51410 4 - 55620 AGGT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483689 4 + 204787373 GGCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563168 4 + 19675229 GGGT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 431397 4 - 91754291 GGGT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 472534 4 + 7796314 GGGT i colAng1.NW_012118932v1 C 0 T 113 s calJac3.chr17 954223 4 - 74750902 GGGT i calJac3.chr17 I 1 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609249 0 - 1977891 C e cerAty1.NW_012004056v1 503387 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 120 + 123690457 T a score=8239.000000 s hg38.chr3_KI270779v1_alt 143461 9 + 205312 ATAGACACC s panTro5.chr3 2479633 9 - 202621043 GCAGACACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51414 9 - 55620 GTGGACACC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483693 9 + 204787373 GTAGACACC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563172 9 + 19675229 GTAGACTCC i macNem1.NW_012014355v1 C 0 I 28 s chlSab2.chr15 431401 9 - 91754291 GTAGACACC i chlSab2.chr15 C 0 T 84 s calJac3.chr17 954227 5 - 74750902 GGAGA---- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e manLeu1.NW_012102020v1 609249 0 - 1977891 C e cerAty1.NW_012004056v1 503387 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 120 + 123690457 T a score=442.000000 s hg38.chr3_KI270779v1_alt 143470 32 + 205312 CTCCCTTCATCG--CTCAGGGGTGC------------------------------------------------TCAGGGCTA s panTro5.chr3 2479642 80 - 202621043 CCATCTCCATCG--CTCAGGGGTGCAGACACCCCATCTCCATCACTTAGCGGGTGGAAACCTCTGTCCATCGTTCAGGGGTG i panTro5.chr3 C 0 T 178 s gorGor5.CYUI01001831v1 51423 22 - 55620 CCCTCTCCGTCG--CTCAGGGGTG---------------------------------------------------------- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483702 20 + 204787373 --CTCTCCATCA--CTCAGGGGTG---------------------------------------------------------- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563209 24 + 19675229 CTCTCTCCATCACTCTCAGGGGTG---------------------------------------------------------- i macNem1.NW_012014355v1 I 28 C 0 s cerAty1.NW_012004056v1 503387 11 + 16847902 -------------CCTCAGGGCTG---------------------------------------------------------- i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e calJac3.chr17 954232 0 - 74750902 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e manLeu1.NW_012102020v1 609249 0 - 1977891 C e chlSab2.chr15 431410 84 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 120 + 123690457 T a score=12199.000000 s hg38.chr3_KI270779v1_alt 143502 13 + 205312 TAGACACCCTCCC s panTro5.chr3 2479544 13 - 202621043 TAGACACCCTCCC i panTro5.chr3 T 178 C 0 s gorGor5.CYUI01001831v1 51445 11 - 55620 TGGACACC--CCC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483722 13 + 204787373 TAGACACCCTCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563233 13 + 19675229 TAGACACCGTCTC i macNem1.NW_012014355v1 C 0 I 30 s cerAty1.NW_012004056v1 503398 13 + 16847902 TAGACACTCTCTC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e calJac3.chr17 954232 0 - 74750902 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e manLeu1.NW_012102020v1 609249 0 - 1977891 C e chlSab2.chr15 431410 84 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 120 + 123690457 T a score=1115.000000 s hg38.chr3_KI270779v1_alt 143515 2 + 205312 TT s panTro5.chr3 2479557 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51456 2 - 55620 TC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483735 2 + 204787373 TC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503411 2 + 16847902 TC i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e macNem1.NW_012014355v1 563246 30 + 19675229 I e calJac3.chr17 954232 0 - 74750902 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e manLeu1.NW_012102020v1 609249 0 - 1977891 C e chlSab2.chr15 431410 84 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 120 + 123690457 T a score=7290.000000 s hg38.chr3_KI270779v1_alt 143517 4 + 205312 CATC s panTro5.chr3 2479559 4 - 202621043 CATC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51458 4 - 55620 CGTC i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483737 4 + 204787373 CATC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503413 4 + 16847902 CATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431326 4 - 91754291 CATC i chlSab2.chr15 T 84 C 0 s manLeu1.NW_012102020v1 609249 4 - 1977891 CATC i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e macNem1.NW_012014355v1 563246 30 + 19675229 I e calJac3.chr17 954232 0 - 74750902 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907031 120 + 123690457 T a score=13387.000000 s hg38.chr3_KI270779v1_alt 143521 6 + 205312 GCTCAG s panTro5.chr3 2479563 6 - 202621043 GCTCAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51462 6 - 55620 GCTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906911 6 + 123690457 GCTCAG i nomLeu3.chr11 T 120 C 0 s rheMac8.chr2 202483741 6 + 204787373 ACTCAG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503417 6 + 16847902 GCTCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431330 6 - 91754291 ACTCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609253 6 - 1977891 ACTCAA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107456 26 + 190779 I e macNem1.NW_012014355v1 563246 30 + 19675229 I e calJac3.chr17 954232 0 - 74750902 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=25004.000000 s hg38.chr3_KI270779v1_alt 143527 11 + 205312 GGGTGTAGACA s panTro5.chr3 2479569 11 - 202621043 GGGTGTAGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107482 11 + 190779 AGGTGTAGACA i panPan2.chrUn_NW_014024201v1 I 26 C 0 s gorGor5.CYUI01001831v1 51468 11 - 55620 AGGTGTGGACA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906917 9 + 123690457 -GGGGTGGA-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483747 11 + 204787373 GGCTGTAGACA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503423 11 + 16847902 GGGTGTAGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431336 11 - 91754291 GGGTGTAGACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609259 11 - 1977891 GGGTGTAGACA i manLeu1.NW_012102020v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563246 30 + 19675229 I e calJac3.chr17 954232 0 - 74750902 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472538 113 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=67556.000000 s hg38.chr3_KI270779v1_alt 143538 29 + 205312 CCCTCTCTCCATCGCTCAGGGG-TGTAGAT s panTro5.chr3 2479580 29 - 202621043 CCCTCTCTCCATCACTCAGGGG-TGCAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107493 29 + 190779 CCCTCTCTCCATCGCTCAGAGG-TGTAGAC i panPan2.chrUn_NW_014024201v1 C 0 T 30 s gorGor5.CYUI01001831v1 51479 29 - 55620 CCCCCTCTCCGTCGCTCAGGGG-TGTGGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906926 27 + 123690457 CCCTCCTTCCATCACTCAGGGA--GCGGA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483758 3 + 204787373 CCC--------------------------- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503434 29 + 16847902 CCCTCTCTCCATCAGTCACAAG-TGTAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431347 29 - 91754291 CCCTCTCTCCATCACTCAGGGG-TGTAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609270 29 - 1977891 CCCTCTCTCCATCCCTCGGGGG-TGTAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472425 29 + 7796314 CCCTGTCTCCATCACTCAGCAG-TGTAGAC i colAng1.NW_012118932v1 T 113 C 0 s calJac3.chr17 954232 29 - 74750902 -TCTCTCTCCATCACTCAGGGGGTGGAGAT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563246 30 + 19675229 I e saiBol1.JH378146 476673 245 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=284587.000000 s hg38.chr3_KI270779v1_alt 143567 78 + 205312 ACCCTC----------------------------TCTCCATCGCTCA-GGGGTGTAGACACCCTCTCTCCATCGCTCAGGGGTGTGGACAC----------------------------CCTCTCTCCATCGCTC s panTro5.chr3 2479609 106 - 202621043 ACCCCA----------------------------TCTCCATCGCTCA-GGGGTGCAGACACCCCATCTCCATCGCTCAGGGGTGCAGACACCCCATCTCCATCACTTAGCGGGTGGAAACCTCTGTCCATCGTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107492 78 + 190779 ACCCTC----------------------------TCTCCATCGCTCA-GAGGTGTAGACACCCTCTCTCTATCGCTCACGGGTGCAGACAC----------------------------CCTCTCTCCATCGATC i panPan2.chrUn_NW_014024201v1 T 30 C 0 s gorGor5.CYUI01001831v1 51508 77 - 55620 ACCCTC----------------------------CCTCCGTCGCTCA-G-GGTGTGGACACCCTCCCTCCGTCGCTCAGGGGTGTGGACAC----------------------------CCTCTCTCCGTCGCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906953 76 + 123690457 GCCCTC----------------------------CCTCCGTTGTTCA-GGGGTGTAGACACCCCCTCTCCATCACTTAGGGG-GTGGAAA-----------------------------CCTCTCTCCATCGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483761 72 + 204787373 ----------------------------------TCTCCATCACTCA-GGGGTGTAGACACCCTCTCTCCATCACTCAGGGCTGTAGACAC----------------------------CCTCTCTCCATCACTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563276 68 + 19675229 --------------------------------------CATCCCTCA-GGGGTGTAGACACCCTCTCTCCATCCCTCAGGGCTGTAGACAC----------------------------CCTCTCTCCATCCCTC i macNem1.NW_012014355v1 I 30 C 0 s cerAty1.NW_012004056v1 503463 106 + 16847902 AGCCTATCTCCATCCCTCAGTGGCTGGAGCCCTGTCTCCATCACTCA-GCGGTGTAGACACCCTCTCTCCATCACTAAGGGGTGTAGACAC----------------------------CCTCTCTCCATAACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431376 77 - 91754291 ACCCTC----------------------------TCTCCATAACTCAGGGGGTGTAGACACC--CTCTCCATCACTCAGGGGTGTAGACAC----------------------------CCTCTCTCCATAACTC i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 609299 78 - 1977891 ACCCTC----------------------------TCTCCATTACTCA-GGGCTGTAGACACCCTCTCTCCATCGCTCGGGGGTGTAGACAC----------------------------CCTCTCTCCATCGCTC i manLeu1.NW_012102020v1 C 0 T 90 s colAng1.NW_012118932v1 472454 78 + 7796314 AACGTC----------------------------TCTCCATCACTAA-GGGGTGTAGACACCCTCTCTCCATCCCTCGGGGGTGTAGACAC----------------------------CCTCTCTCCATCGCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954261 72 - 74750902 ---CTC----------------------------TCTCCATCACTCA-GGGG-GTGGAGTGTCTCTCTCCATCACTCAGGGG-GTGGAGA-----------------------------TCTCTCTCCATCTCTC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=-3244.000000 s hg38.chr3_KI270779v1_alt 143645 2 + 205312 A-G s panTro5.chr3 2479715 2 - 202621043 A-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107570 2 + 190779 A-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51585 2 - 55620 A-G i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907029 2 + 123690457 A-G i nomLeu3.chr11 C 0 T 58 s rheMac8.chr2 202483833 2 + 204787373 A-G i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563344 2 + 19675229 A-G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503569 3 + 16847902 AGG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472532 2 + 7796314 -GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954333 1 - 74750902 A-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609377 90 - 1977891 T e chlSab2.chr15 431453 1 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=17316.000000 s hg38.chr3_KI270779v1_alt 143647 5 + 205312 GGGTG s panTro5.chr3 2479717 5 - 202621043 GGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107572 5 + 190779 GGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51587 5 - 55620 GGGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906973 5 + 123690457 GGGTG i nomLeu3.chr11 T 58 C 0 s rheMac8.chr2 202483835 5 + 204787373 GGCTA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563346 5 + 19675229 GGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503572 5 + 16847902 GGGTG i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472534 5 + 7796314 GGGTG i colAng1.NW_012118932v1 C 0 T 94 s calJac3.chr17 954334 5 - 74750902 GGGTG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609377 90 - 1977891 T e chlSab2.chr15 431453 1 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=10753.000000 s hg38.chr3_KI270779v1_alt 143652 4 + 205312 TAGA s panTro5.chr3 2479722 4 - 202621043 TAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107577 4 + 190779 CAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51592 4 - 55620 TGGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906978 4 + 123690457 TAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483840 4 + 204787373 TAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563351 4 + 19675229 TAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503577 4 + 16847902 TAGA i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 954339 4 - 74750902 TGGA i calJac3.chr17 C 0 I 169 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e manLeu1.NW_012102020v1 609377 90 - 1977891 T e chlSab2.chr15 431453 1 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=3972.000000 s hg38.chr3_KI270779v1_alt 143656 3 + 205312 -CAC s panTro5.chr3 2479726 3 - 202621043 -CAC i panTro5.chr3 C 0 I 4381 s panPan2.chrUn_NW_014024201v1 107581 3 + 190779 -CAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51596 3 - 55620 -CAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906982 3 + 123690457 -CAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483844 3 + 204787373 -CAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563355 3 + 19675229 -CAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503581 3 + 16847902 -CAC i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 954512 3 - 74750902 GTG- i calJac3.chr17 I 169 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e manLeu1.NW_012102020v1 609377 90 - 1977891 T e chlSab2.chr15 431453 1 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=3905.000000 s hg38.chr3_KI270779v1_alt 143659 2 + 205312 CC s panTro5.chr3 2484110 2 - 202621043 CC i panTro5.chr3 I 4381 C 0 s panPan2.chrUn_NW_014024201v1 107584 2 + 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 T 130 s gorGor5.CYUI01001831v1 51599 2 - 55620 CC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906985 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483847 1 + 204787373 -C i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 563358 1 + 19675229 -C i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 503584 1 + 16847902 -C i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 954515 2 - 74750902 TC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e manLeu1.NW_012102020v1 609377 90 - 1977891 T e chlSab2.chr15 431453 1 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=26427.000000 s hg38.chr3_KI270779v1_alt 143661 20 + 205312 TCCCTTCATCGCTCAGGGGT- s panTro5.chr3 2484112 20 - 202621043 TCCCTTCATTGCTCAGGGGT- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 51601 20 - 55620 TCCCTTCGTCGCTCAGGGGT- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906987 19 + 123690457 CCTCTCCATCACTTAGGGG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483849 20 + 204787373 TCTCTCCATCGCTCAGGGCT- i rheMac8.chr2 I 1 C 0 s macNem1.NW_012014355v1 563360 20 + 19675229 TCTCTCCATCCCTCAGGGCT- i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 503585 19 + 16847902 -CTCTCCATCACTCAGGGCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431454 6 - 91754291 --------------GGGGGT- i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 609287 6 - 1977891 --------------GGGGGT- i manLeu1.NW_012102020v1 T 90 C 0 s calJac3.chr17 954517 21 - 74750902 TCTCTCCATTGCTCAGTGGGT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107586 130 + 190779 T e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=24266.000000 s hg38.chr3_KI270779v1_alt 143681 9 + 205312 GTGGACACC- s panTro5.chr3 2484132 9 - 202621043 GTGGACACC- i panTro5.chr3 C 0 T 4412 s panPan2.chrUn_NW_014024201v1 107456 7 + 190779 GTGGAAA--- i panPan2.chrUn_NW_014024201v1 T 130 C 0 s gorGor5.CYUI01001831v1 51621 9 - 55620 GTAGACACC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907006 9 + 123690457 GTGGAAACC- i nomLeu3.chr11 C 0 I 1 s rheMac8.chr2 202483869 9 + 204787373 GTAGACACC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563380 9 + 19675229 GTAGACACC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503604 9 + 16847902 GTAGACACC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431460 9 - 91754291 GTAGACACC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609293 9 - 1977891 GTAGACACC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954538 8 - 74750902 --GGAGATCT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e macFas5.chr2 83084 14732 + 192460366 M a score=15190.000000 s hg38.chr3_KI270779v1_alt 143690 6 + 205312 CTCTCT s gorGor5.CYUI01001831v1 51630 6 - 55620 CTCTCT i gorGor5.CYUI01001831v1 C 0 I 38 s nomLeu3.chr11 120907016 6 + 123690457 CTCTCC i nomLeu3.chr11 I 1 C 0 s rheMac8.chr2 202483878 6 + 204787373 CTCTCT i rheMac8.chr2 C 0 I 2 s macNem1.NW_012014355v1 563389 6 + 19675229 CTCTCT i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 503613 6 + 16847902 CTCTCT i cerAty1.NW_012004056v1 C 0 I 2 s manLeu1.NW_012102020v1 609302 6 - 1977891 CTCTCT i manLeu1.NW_012102020v1 C 0 I 2 s calJac3.chr17 954546 6 - 74750902 CTCTCT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107463 0 + 190779 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e chlSab2.chr15 431469 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2484141 4412 - 202621043 T a score=7700.000000 s hg38.chr3_KI270779v1_alt 143696 6 + 205312 ATCGTT s nomLeu3.chr11 120907022 6 + 123690457 ATCGCT i nomLeu3.chr11 C 0 T 117 s rheMac8.chr2 202483886 6 + 204787373 ATCGCT i rheMac8.chr2 I 2 C 0 s macNem1.NW_012014355v1 563397 6 + 19675229 ATCGCT i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 503621 6 + 16847902 ATAACT i cerAty1.NW_012004056v1 I 2 C 0 s manLeu1.NW_012102020v1 609310 6 - 1977891 ATTACT i manLeu1.NW_012102020v1 I 2 C 0 s calJac3.chr17 954552 6 - 74750902 ATCACT i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107463 0 + 190779 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e chlSab2.chr15 431469 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e gorGor5.CYUI01001831v1 51636 38 - 55620 I e panTro5.chr3 2484141 4412 - 202621043 T a score=1500.000000 s hg38.chr3_KI270779v1_alt 143702 1 + 205312 C s rheMac8.chr2 202483892 1 + 204787373 C i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 563403 1 + 19675229 C i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 503627 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 I 2 s manLeu1.NW_012102020v1 609316 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 954558 1 - 74750902 C i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107463 0 + 190779 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e chlSab2.chr15 431469 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907028 117 + 123690457 T e gorGor5.CYUI01001831v1 51636 38 - 55620 I e panTro5.chr3 2484141 4412 - 202621043 T a score=3414.000000 s hg38.chr3_KI270779v1_alt 143703 2 + 205312 GG s gorGor5.CYUI01001831v1 51674 2 - 55620 GG i gorGor5.CYUI01001831v1 I 38 C 0 s rheMac8.chr2 202483894 2 + 204787373 GG i rheMac8.chr2 I 1 C 0 s macNem1.NW_012014355v1 563405 2 + 19675229 GG i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 503630 2 + 16847902 GG i cerAty1.NW_012004056v1 I 2 C 0 s manLeu1.NW_012102020v1 609318 2 - 1977891 GG i manLeu1.NW_012102020v1 I 1 C 0 s calJac3.chr17 954559 2 - 74750902 AG i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107463 0 + 190779 C e saiBol1.JH378146 476673 245 + 17725628 T e colAng1.NW_012118932v1 472539 94 + 7796314 T e chlSab2.chr15 431469 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907028 117 + 123690457 T e panTro5.chr3 2484141 4412 - 202621043 T a score=674.000000 s hg38.chr3_KI270779v1_alt 143705 3 + 205312 -GGT s gorGor5.CYUI01001831v1 51676 3 - 55620 -GGT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483896 3 + 204787373 -GGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563407 3 + 19675229 -GCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503632 3 + 16847902 -GGT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609320 3 - 1977891 -GCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472445 3 + 7796314 -AGT i colAng1.NW_012118932v1 T 94 C 0 s calJac3.chr17 954561 3 - 74750902 GGG- i calJac3.chr17 C 0 T 114 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107463 0 + 190779 C e saiBol1.JH378146 476673 245 + 17725628 T e chlSab2.chr15 431469 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907028 117 + 123690457 T e panTro5.chr3 2484141 4412 - 202621043 T a score=14525.000000 s hg38.chr3_KI270779v1_alt 143708 8 + 205312 GTAGACAT s gorGor5.CYUI01001831v1 51679 8 - 55620 GTAGACAA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483899 8 + 204787373 GTGGACAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563410 8 + 19675229 GTAGACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503635 8 + 16847902 GTAGACAT i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 609323 8 - 1977891 GTAGACAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472448 8 + 7796314 GTAGACAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954450 8 - 74750902 GTGGAGAT i calJac3.chr17 T 114 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e panPan2.chrUn_NW_014024201v1 107463 0 + 190779 C e saiBol1.JH378146 476673 245 + 17725628 T e chlSab2.chr15 431469 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907028 117 + 123690457 T e panTro5.chr3 2484141 4412 - 202621043 T a score=45426.000000 s hg38.chr3_KI270779v1_alt 143716 12 + 205312 CCTCTCTCCATC s panTro5.chr3 2479729 12 - 202621043 CCTCTCTCCATC i panTro5.chr3 T 4412 C 0 s panPan2.chrUn_NW_014024201v1 107463 12 + 190779 CCTCTCTCTATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51687 12 - 55620 CCTCCCTTCATT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483907 12 + 204787373 CCTCTCTCCATC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563418 12 + 19675229 CCTCTCTCCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503643 10 + 16847902 C--CTCTCCATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431469 9 - 91754291 ---CTCTCCATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609331 12 - 1977891 CCTCTCTCCATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472456 12 + 7796314 CGTCTCTCCATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954458 11 - 74750902 -CTCTCTCCATC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907028 117 + 123690457 T a score=58376.000000 s hg38.chr3_KI270779v1_alt 143728 16 + 205312 GCTCAG-GGGTGTAGAC s panTro5.chr3 2479741 16 - 202621043 GCTCAG-GGGTGTAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107475 17 + 190779 GCTCAGCAGGTGTAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51699 16 - 55620 GCTCAG-GGGTGTAGAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906911 15 + 123690457 GCTCAGGGGGTGGAG-- i nomLeu3.chr11 T 117 C 0 s rheMac8.chr2 202483919 16 + 204787373 GCTCGG-GGGTGTAGAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563430 16 + 19675229 GCTCAG-GGCTGTAGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503653 16 + 16847902 ACTCAG-CGGTGTAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431478 16 - 91754291 GCTCAG-GGGTGTAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609343 16 - 1977891 GCTCGG-GGGTGTAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472468 16 + 7796314 ACTAAG-GGGTGTAGAC i colAng1.NW_012118932v1 C 0 T 206 s calJac3.chr17 954469 15 - 74750902 ACTCAGGGGGTGGAG-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=8258.000000 s hg38.chr3_KI270779v1_alt 143744 5 + 205312 -ACCCC s panTro5.chr3 2479757 5 - 202621043 -ACCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107492 5 + 190779 -ACCCT i panPan2.chrUn_NW_014024201v1 C 0 I 30 s gorGor5.CYUI01001831v1 51715 5 - 55620 -AACCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906926 4 + 123690457 --CCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483935 5 + 204787373 -ACCCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563446 5 + 19675229 -ACCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503669 5 + 16847902 -AACCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431494 5 - 91754291 -ACCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609359 5 - 1977891 -ACCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472278 5 + 7796314 -ACCCG i colAng1.NW_012118932v1 T 206 C 0 s calJac3.chr17 954484 5 - 74750902 TGTCT- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=76914.000000 s hg38.chr3_KI270779v1_alt 143749 24 + 205312 CTCTCCATCGCTCAGGGGTGTAGA s panTro5.chr3 2479762 24 - 202621043 CTCTCCATCGCTCAGGGGTGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107527 24 + 190779 CTCTCTATCGCTCACGGGTGCAGA i panPan2.chrUn_NW_014024201v1 I 30 C 0 s gorGor5.CYUI01001831v1 51720 24 - 55620 CCCTTCATCACTCAGGGGTGTAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906930 23 + 123690457 CCTTCCATCACTCAGGGA-GCGGA i nomLeu3.chr11 C 0 T 9701 s rheMac8.chr2 202483940 24 + 204787373 CTCTCCATCGCTCAGGGGTGTAGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563451 14 + 19675229 CTCTCCATCGCTCA---------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503674 24 + 16847902 CTCTCCATCACTCAGGGGTGTAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431499 13 - 91754291 CTCTCCATCGCTC----------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609364 20 - 1977891 CTCTCCATCGCTCGGGGGTG---- i manLeu1.NW_012102020v1 C 0 T 7 s colAng1.NW_012118932v1 472283 24 + 7796314 CTCTCCATCTCTCAGGAGTGTAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954489 23 - 74750902 CTCTCCATCACTCAGGGG-GTGGA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e macFas5.chr2 83084 14732 + 192460366 M a score=-1120.000000 s hg38.chr3_KI270779v1_alt 143773 1 + 205312 -C s panTro5.chr3 2479786 1 - 202621043 -C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107551 1 + 190779 -C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51744 1 - 55620 -C i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483964 1 + 204787373 -C i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503698 1 + 16847902 -C i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472307 1 + 7796314 -C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954512 1 - 74750902 G- i calJac3.chr17 C 0 T 170 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563465 0 + 19675229 C e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609384 7 - 1977891 T e chlSab2.chr15 431512 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9701 + 123690457 T a score=58451.000000 s hg38.chr3_KI270779v1_alt 143774 36 + 205312 ACCCTCTCTCCATCGCTCA-GGGGTGCAGACACCCCA s panTro5.chr3 2479787 36 - 202621043 ACCCTCTCTCCATTGCTCA-GGGGTGCAGACACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107552 36 + 190779 ACCCTCTCTCCATCGATCA-GGGGTGCAGACACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51745 34 - 55620 ACCCTCTCTCCATCGCTCA--GGGTATAGACACCCC- i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483965 36 + 204787373 ACCCTCTCTCCATCCCTCG-GGGGTGTAGACACCCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563465 17 + 19675229 --------------------GGGCTGTAGACACCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503699 36 + 16847902 ACCTTCTCTCCATCCCTCA-GGGCTGTAGACACCCTC i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472308 36 + 7796314 ACCCTCTCTCCATCAGTCA-GAAGTGTAGACAGCCTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954343 34 - 74750902 GCTCTCTCTCCATCACTCACGGGGTGGAGATCTC--- i calJac3.chr17 T 170 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18946 0 + 21398 C e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609384 7 - 1977891 T e chlSab2.chr15 431512 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120906953 9701 + 123690457 T a score=31376.000000 s hg38.chr3_KI270779v1_alt 143810 9 + 205312 TCTCCATCA s panTro5.chr3 2479823 9 - 202621043 TCTCCATCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107588 9 + 190779 TCTCCATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120897252 9 + 123690457 TCTCCATCG i nomLeu3.chr11 T 9701 I 9651 s rheMac8.chr2 202484001 9 + 204787373 TCTCCATCG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563482 9 + 19675229 TCTCCATCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503735 9 + 16847902 TCTCCATAA i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472344 9 + 7796314 TCTCCATCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954377 9 - 74750902 TCTCCATCT i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 18946 9 + 21398 TCTCCATCA i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609384 7 - 1977891 T e chlSab2.chr15 431512 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e gorGor5.CYUI01001831v1 51779 0 - 55620 C a score=8718.000000 s hg38.chr3_KI270779v1_alt 143819 3 + 205312 CTT s panTro5.chr3 2479832 3 - 202621043 CTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107597 3 + 190779 CTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120906912 3 + 123690457 CTC i nomLeu3.chr11 I 9651 C 0 s rheMac8.chr2 202484010 3 + 204787373 CTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563491 3 + 19675229 CTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503744 3 + 16847902 CTC i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472353 3 + 7796314 TTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954386 3 - 74750902 CTC i calJac3.chr17 C 0 C 0 s aotNan1.NW_018492867v1 18955 3 + 21398 CTT i aotNan1.NW_018492867v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e saiBol1.JH378146 476673 245 + 17725628 T e manLeu1.NW_012102020v1 609384 7 - 1977891 T e chlSab2.chr15 431512 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e gorGor5.CYUI01001831v1 51779 0 - 55620 C a score=27316.000000 s hg38.chr3_KI270779v1_alt 143822 10 + 205312 AGGGG-GTGGA s panTro5.chr3 2479835 10 - 202621043 AGCGG-GTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107600 10 + 190779 AGCAG-GTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120906915 10 + 123690457 AGGGG-GTGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484013 7 + 204787373 GG----GTGGA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563494 7 + 19675229 GG----GTGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503747 11 + 16847902 AGGGATGTAGA i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 431512 7 - 91754291 GG----GTGGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 472356 10 + 7796314 AGGGG-GTGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954389 10 - 74750902 AGGGG-GTGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476428 10 + 17725628 AGGGG-GTAGA i saiBol1.JH378146 T 245 C 0 s aotNan1.NW_018492867v1 18958 10 + 21398 AGGGG-GTGGA i aotNan1.NW_018492867v1 C 0 I 107 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M e gorGor5.CYUI01001831v1 51779 0 - 55620 C a score=115052.000000 s hg38.chr3_KI270779v1_alt 143832 34 + 205312 AACCTCTCTCTATCACTCAGCAGGTGTAGACACC s panTro5.chr3 2479845 34 - 202621043 AACCTCTCTCTATCGCTCAGCAGGTGTAGACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107610 34 + 190779 AACCTCTCTCTATTGCTCAGCAGGTGTAGACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51779 29 - 55620 -----CTCTCCATCGCTCAGCAGGTGTAGACACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906925 31 + 123690457 GCCCTCCTTCCATCACTCAGGGAGCGGAG---CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484020 34 + 204787373 AATCTCTCTCCACGGCTCAGCAGGTGTAGACACC i rheMac8.chr2 C 0 T 503 s macNem1.NW_012014355v1 563501 34 + 19675229 AATCTCTCTCCATGGCTCAGCAGGTGTAGACACC i macNem1.NW_012014355v1 C 0 T 206 s cerAty1.NW_012004056v1 503759 33 + 16847902 ACCCTCTCTCCATAACTCAG-GGGTGTAGACACC i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 431519 34 - 91754291 AATCTCTTTCCATGGCTCAGCAGGTGTAGACACC i chlSab2.chr15 C 0 T 84 s colAng1.NW_012118932v1 472366 33 + 7796314 GCCCTCTCTCCATCACTCAG-GGGTGTAGACACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954399 31 - 74750902 GATCTCTCTCCATCACTCAGGGTGTGGAGCT--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476438 31 + 17725628 AACCTCTCTCCATCACTCATGGGGTGGAGAC--- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M a score=10505.000000 s hg38.chr3_KI270779v1_alt 143866 2 + 205312 CT s panTro5.chr3 2479879 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107644 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51808 2 - 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906956 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483551 2 + 204787373 CT i rheMac8.chr2 T 503 C 0 s macNem1.NW_012014355v1 563329 2 + 19675229 CT i macNem1.NW_012014355v1 T 206 C 0 s cerAty1.NW_012004056v1 503792 2 + 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 472399 2 + 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954430 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476469 2 + 17725628 CT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e chlSab2.chr15 431553 84 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M a score=11264.000000 s hg38.chr3_KI270779v1_alt 143868 2 + 205312 CT s panTro5.chr3 2479881 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107646 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51810 2 - 55620 CT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906958 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483553 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563331 2 + 19675229 CT i macNem1.NW_012014355v1 C 0 I 120 s cerAty1.NW_012004056v1 503794 2 + 16847902 CT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431469 2 - 91754291 CT i chlSab2.chr15 T 84 C 0 s colAng1.NW_012118932v1 472401 2 + 7796314 CT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954432 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476471 2 + 17725628 CT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M a score=38475.000000 s hg38.chr3_KI270779v1_alt 143870 8 + 205312 CTCCATCG s panTro5.chr3 2479883 8 - 202621043 CTCCATCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107648 8 + 190779 CTCCATTG i panPan2.chrUn_NW_014024201v1 C 0 T 149 s gorGor5.CYUI01001831v1 51812 8 - 55620 CTCCATCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906960 8 + 123690457 CTCCGTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483555 8 + 204787373 CTCCATCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563453 8 + 19675229 CTCCATCG i macNem1.NW_012014355v1 I 120 C 0 s cerAty1.NW_012004056v1 503796 8 + 16847902 CTCCATTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431471 8 - 91754291 CTCCATCG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 472403 8 + 7796314 CTCCATCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954434 8 - 74750902 CTCCATCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476473 8 + 17725628 CTCCACTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M a score=21871.000000 s hg38.chr3_KI270779v1_alt 143878 5 + 205312 CTCAG- s panTro5.chr3 2479891 5 - 202621043 CTCAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107507 5 + 190779 CTCAG- i panPan2.chrUn_NW_014024201v1 T 149 I 60 s gorGor5.CYUI01001831v1 51820 5 - 55620 CTCAG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906968 5 + 123690457 TTCAG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483563 5 + 204787373 CTCAG- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563461 5 + 19675229 CTCAG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503804 5 + 16847902 CTCAG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431479 5 - 91754291 CTCAG- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 472411 5 + 7796314 CTCAG- i colAng1.NW_012118932v1 C 0 I 128 s calJac3.chr17 954442 6 - 74750902 CTCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476481 6 + 17725628 CTCAGG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M a score=39745.000000 s hg38.chr3_KI270779v1_alt 143883 12 + 205312 GGGTGCAGACAC s panTro5.chr3 2479896 12 - 202621043 AGGTGTAGACAC i panTro5.chr3 C 0 T 237 s panPan2.chrUn_NW_014024201v1 107572 12 + 190779 GGGTGCAGACAC i panPan2.chrUn_NW_014024201v1 I 60 C 0 s gorGor5.CYUI01001831v1 51825 12 - 55620 GGGTGCAGACAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906973 12 + 123690457 GGGTGTAGACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483568 12 + 204787373 GGCTGTAGACAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563466 12 + 19675229 GGCTGTAGACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503809 12 + 16847902 GGCTGTAGACAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431484 12 - 91754291 GGGTGTAGACAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954448 10 - 74750902 GGGTGGAGA--T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476487 12 + 17725628 GGGTGGAGATGT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M a score=46448.000000 s hg38.chr3_KI270779v1_alt 143895 13 + 205312 CCCATCTCCATCA s panTro5.chr3 2479671 13 - 202621043 CCCATCTCCATCA i panTro5.chr3 T 237 C 0 s panPan2.chrUn_NW_014024201v1 107584 13 + 190779 CCCATCTCCATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51837 13 - 55620 CCCATCTCCATCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906985 13 + 123690457 CCCCTCTCCATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202483580 13 + 204787373 CCTCTCTCCATTA i rheMac8.chr2 C 0 I 235 s macNem1.NW_012014355v1 563478 13 + 19675229 CCTCTCTCCATCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503821 13 + 16847902 CCTCTCTCCATAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431496 13 - 91754291 CCTCTCTCCATCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954458 12 - 74750902 -CTCTCTCCATCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476499 12 + 17725628 -CTCTCGCCATCG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e macFas5.chr2 83084 14732 + 192460366 M a score=7766.000000 s hg38.chr3_KI270779v1_alt 143908 3 + 205312 CTT s panTro5.chr3 2479684 3 - 202621043 CTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107597 3 + 190779 CTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51850 3 - 55620 CTT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120906998 3 + 123690457 CTT i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 563491 3 + 19675229 CTC i macNem1.NW_012014355v1 C 0 T 161 s chlSab2.chr15 431509 3 - 91754291 CTC i chlSab2.chr15 C 0 T 219 s calJac3.chr17 954470 3 - 74750902 CTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476511 3 + 17725628 CTC i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I a score=1911.000000 s hg38.chr3_KI270779v1_alt 143911 1 + 205312 A s panTro5.chr3 2479687 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107600 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51853 1 - 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907001 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 954473 1 - 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476514 1 + 17725628 A i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563494 161 + 19675229 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609384 7 - 1977891 T e chlSab2.chr15 431512 219 - 91754291 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I a score=19306.000000 s hg38.chr3_KI270779v1_alt 143912 11 + 205312 GGGGGTGGAA-A s panTro5.chr3 2479688 11 - 202621043 GCGGGTGGAA-A i panTro5.chr3 C 0 I 209 s panPan2.chrUn_NW_014024201v1 107601 11 + 190779 GCAGGTGGAA-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51854 11 - 55620 GGGAGTGGAA-A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907002 11 + 123690457 GGGGGTGGAA-A i nomLeu3.chr11 C 0 C 0 s manLeu1.NW_012102020v1 609377 11 - 1977891 GGGGGTGGAA-A i manLeu1.NW_012102020v1 T 7 C 0 s calJac3.chr17 954474 12 - 74750902 GGGGGTGGAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476515 11 + 17725628 GAGGGTGGAG-A i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563494 161 + 19675229 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e chlSab2.chr15 431512 219 - 91754291 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I a score=6156.000000 s hg38.chr3_KI270779v1_alt 143923 3 + 205312 CCT s panTro5.chr3 2479908 3 - 202621043 CCT i panTro5.chr3 I 209 C 0 s panPan2.chrUn_NW_014024201v1 107612 3 + 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51865 3 - 55620 CCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907013 3 + 123690457 CCT i nomLeu3.chr11 C 0 C 0 s manLeu1.NW_012102020v1 609388 3 - 1977891 TCT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954486 3 - 74750902 TCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476526 3 + 17725628 TCT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563494 161 + 19675229 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e chlSab2.chr15 431512 219 - 91754291 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I a score=8015.000000 s hg38.chr3_KI270779v1_alt 143926 29 + 205312 CTCTCTATCGCTCAGCAGGTGTAGGCACC s panTro5.chr3 2479911 6 - 202621043 CTCTCT----------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107615 29 + 190779 CTCTCTATTGCTCAGCAGGTGTAGACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51868 29 - 55620 CTCTCTATTGCTCAGCAGGTGTAGACACC i gorGor5.CYUI01001831v1 C 0 C 0 s manLeu1.NW_012102020v1 609391 29 - 1977891 CTCTCCATGGCTCAGCAGGTGTAGACACC i manLeu1.NW_012102020v1 C 0 T 234 s calJac3.chr17 954489 28 - 74750902 CTCTCCATCACTCAGGGGGTGGAGTGTC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476529 5 + 17725628 CTT-----------------------TC- i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563494 161 + 19675229 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e chlSab2.chr15 431512 219 - 91754291 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=205.000000 s hg38.chr3_KI270779v1_alt 143955 1 + 205312 C s panPan2.chrUn_NW_014024201v1 107644 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 T 267 s gorGor5.CYUI01001831v1 51897 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 I 1 s calJac3.chr17 954517 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476534 1 + 17725628 T i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563494 161 + 19675229 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609420 234 - 1977891 T e chlSab2.chr15 431512 219 - 91754291 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479917 0 - 202621043 C a score=1187.000000 s hg38.chr3_KI270779v1_alt 143956 2 + 205312 CC s panPan2.chrUn_NW_014024201v1 107378 2 + 190779 CC i panPan2.chrUn_NW_014024201v1 T 267 C 0 s gorGor5.CYUI01001831v1 51899 2 - 55620 CT i gorGor5.CYUI01001831v1 I 1 C 0 s calJac3.chr17 954518 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476535 2 + 17725628 CT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e macNem1.NW_012014355v1 563494 161 + 19675229 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609420 234 - 1977891 T e chlSab2.chr15 431512 219 - 91754291 T e cerAty1.NW_012004056v1 503834 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479917 0 - 202621043 C a score=103700.000000 s hg38.chr3_KI270779v1_alt 143958 36 + 205312 CTCCATCGCTCAG-GGGTGTAGACACCCTCTCTCCAT s panTro5.chr3 2479917 32 - 202621043 ----ATCGCTCAC-GGGTGCAGACACCCTCTCTCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107380 36 + 190779 CTCCATCGCTCAG-GGGTGTAGACACCCTCTCTCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51901 36 - 55620 CTCCATCGCTCAG-GGGTGTAGACACCCTCTCTCCAT i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 563333 36 + 19675229 CTCCATCCCTCAG-GGCTGTAGACACCCTCTCTCCAT i macNem1.NW_012014355v1 T 161 C 0 s cerAty1.NW_012004056v1 503834 28 + 16847902 --------CTCAG-GGATGTAGACACCCTCTCTCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431293 36 - 91754291 CTCCATCACTCAG-GGGTGTAGACACCCTCTCTCCAT i chlSab2.chr15 T 219 C 0 s manLeu1.NW_012102020v1 609186 36 - 1977891 CTCCATCGCTCAG-GGGTGTAGACACCCTCTCTCCAT i manLeu1.NW_012102020v1 T 234 C 0 s calJac3.chr17 954520 34 - 74750902 CTCCATTGCTCAGTGGGTGGAGA---TCTCTCTCTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476537 34 + 17725628 CTCCATCACTCAGAGGGTGGAGA---TGTCTCTCCAT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483593 235 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=65701.000000 s hg38.chr3_KI270779v1_alt 143994 23 + 205312 CACTCA-GGGGTGCAGACACCCCA s panTro5.chr3 2479949 23 - 202621043 CGATCA-GGGGTGCAGACACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107416 23 + 190779 CGCTCA-GGGGTGCAGACACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51937 23 - 55620 CGCTCA-GGGGTGCAGACACCCCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483828 23 + 204787373 CACTCA-GGGCTATAGACACCCTC i rheMac8.chr2 I 235 C 0 s macNem1.NW_012014355v1 563369 23 + 19675229 CCCTCA-GGGCTGTAGACACCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503862 23 + 16847902 AACTCA-GGGGTGTAGACACCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431329 23 - 91754291 CACTCA-GGGGTGTAGACACCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609222 23 - 1977891 CACTCA-GGGGTGTAGACACCCTC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954554 21 - 74750902 CACTCAGGGGGTGGAG---CTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476571 23 + 17725628 CTCTCAAGGGGTAGAGA-ACTCTG i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 440966 184 - 6778120 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=53281.000000 s hg38.chr3_KI270779v1_alt 144017 11 + 205312 TCTC---CATCACT s panTro5.chr3 2479972 11 - 202621043 TCTC---CATCTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107439 11 + 190779 TCTC---CATCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51960 14 - 55620 TCTCCATCATCACT i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483851 11 + 204787373 TCTC---CATCGCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563392 11 + 19675229 TCTC---CATCGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 503885 11 + 16847902 TCTC---CATCACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431352 11 - 91754291 TCTC---CATCACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609245 11 - 1977891 TCTC---CATCACT i manLeu1.NW_012102020v1 C 0 I 164 s calJac3.chr17 954575 11 - 74750902 TCCC---CATCACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476594 11 + 17725628 TCTC---CTTTGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441150 11 - 6778120 TCTC---CATCACT i cebCap1.NW_016107444v1 I 184 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=-3793.000000 s hg38.chr3_KI270779v1_alt 144028 5 + 205312 TAGG--G s panTro5.chr3 2479983 5 - 202621043 TAGC--A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107450 5 + 190779 TAGG--G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51974 5 - 55620 TAGG--G i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483862 4 + 204787373 CAGG--- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 563403 5 + 19675229 CAGGG-- i macNem1.NW_012014355v1 C 0 M 5320 s cerAty1.NW_012004056v1 503896 4 + 16847902 CAGG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431363 5 - 91754291 CAGG-G- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954586 5 - 74750902 CAGG--G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476605 5 + 17725628 CAGG--G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441161 5 - 6778120 CAGG--G i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=2800.000000 s hg38.chr3_KI270779v1_alt 144033 1 + 205312 G s panTro5.chr3 2479988 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107455 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51979 1 - 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 431368 1 - 91754291 G i chlSab2.chr15 C 0 T 2 s calJac3.chr17 954591 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476610 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441166 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C a score=10596.000000 s hg38.chr3_KI270779v1_alt 144034 6 + 205312 GTGGAA s panTro5.chr3 2479989 6 - 202621043 GTGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107456 6 + 190779 GTGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51980 6 - 55620 GTGGAA i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 954592 6 - 74750902 GTGGAG i calJac3.chr17 C 0 T 86 s saiBol1.JH378146 476611 6 + 17725628 GTGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441167 6 - 6778120 GTGGAG i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C a score=1740.000000 s hg38.chr3_KI270779v1_alt 144040 2 + 205312 AC s panTro5.chr3 2479995 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107462 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51986 2 - 55620 AC i gorGor5.CYUI01001831v1 C 0 C 0 s saiBol1.JH378146 476617 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441173 2 - 6778120 AC i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C a score=1000.000000 s hg38.chr3_KI270779v1_alt 144042 1 + 205312 C s panTro5.chr3 2479997 1 - 202621043 C i panTro5.chr3 C 0 T 220 s panPan2.chrUn_NW_014024201v1 107464 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 51988 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s cebCap1.NW_016107444v1 441175 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C a score=3438.000000 s hg38.chr3_KI270779v1_alt 144043 6 + 205312 TCTCTC s panPan2.chrUn_NW_014024201v1 107465 6 + 190779 TCTCTC i panPan2.chrUn_NW_014024201v1 C 0 I 2 s gorGor5.CYUI01001831v1 51989 6 - 55620 TCTCTC i gorGor5.CYUI01001831v1 C 0 I 157 s cebCap1.NW_016107444v1 441176 6 - 6778120 TCTCTC i cebCap1.NW_016107444v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479998 220 - 202621043 T a score=1146.000000 s hg38.chr3_KI270779v1_alt 144049 2 + 205312 TC s panPan2.chrUn_NW_014024201v1 107473 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 I 2 C 0 s gorGor5.CYUI01001831v1 52152 2 - 55620 TC i gorGor5.CYUI01001831v1 I 157 C 0 s cebCap1.NW_016107444v1 441182 2 - 6778120 TC i cebCap1.NW_016107444v1 C 0 I 361 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479998 220 - 202621043 T a score=1784.000000 s hg38.chr3_KI270779v1_alt 144051 7 + 205312 ACTCAGC s panPan2.chrUn_NW_014024201v1 107475 7 + 190779 GCTCAGC i panPan2.chrUn_NW_014024201v1 C 0 I 30 s gorGor5.CYUI01001831v1 52154 7 - 55620 GCTCAGC i gorGor5.CYUI01001831v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479998 220 - 202621043 T a score=273.000000 s hg38.chr3_KI270779v1_alt 144058 1 + 205312 A s panPan2.chrUn_NW_014024201v1 107512 1 + 190779 A i panPan2.chrUn_NW_014024201v1 I 30 C 0 s gorGor5.CYUI01001831v1 52161 1 - 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503900 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483866 0 + 204787373 C e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479998 220 - 202621043 T a score=1500.000000 s hg38.chr3_KI270779v1_alt 144059 1 + 205312 G s panTro5.chr3 2479778 1 - 202621043 G i panTro5.chr3 T 220 C 0 s panPan2.chrUn_NW_014024201v1 107513 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52162 1 - 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483866 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503900 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954598 86 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=41101.000000 s hg38.chr3_KI270779v1_alt 144060 27 + 205312 GTGTGGACACCCTCTCTCCATCGCTCA s panTro5.chr3 2479779 27 - 202621043 GTGTAGACACCCTCTCTCCATTGCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107514 27 + 190779 GTGTAGACACCCTCTCTCTATCGCTCA i panPan2.chrUn_NW_014024201v1 C 0 I 115 s gorGor5.CYUI01001831v1 52163 27 - 55620 GTGTGGACACCCTCTCTCCATCGCTCA i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483867 27 + 204787373 CTGTAGACACCCTCTCTCCATCGCTCG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 503901 27 + 16847902 GTGTAGACACCCTCTCTCCATCGCTCG i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 954512 20 - 74750902 GTGT-------CTCTCTCCATTGCTCA i calJac3.chr17 T 86 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=1500.000000 s hg38.chr3_KI270779v1_alt 144087 1 + 205312 G s panTro5.chr3 2479806 1 - 202621043 G i panTro5.chr3 C 0 I 41 s gorGor5.CYUI01001831v1 52190 1 - 55620 G i gorGor5.CYUI01001831v1 C 0 C 0 s rheMac8.chr2 202483894 1 + 204787373 G i rheMac8.chr2 C 0 I 159 s cerAty1.NW_012004056v1 503928 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 954532 1 - 74750902 G i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107541 115 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=702.000000 s hg38.chr3_KI270779v1_alt 144088 14 + 205312 CAGGTGTGGACACT s gorGor5.CYUI01001831v1 52191 14 - 55620 CAGGTGTGGAAACC i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 954533 11 - 74750902 --TGGGTGGAGAT- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107541 115 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503929 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C e panTro5.chr3 2479807 41 - 202621043 I a score=6343.000000 s hg38.chr3_KI270779v1_alt 144102 12 + 205312 CTCTCTCTATCA s panTro5.chr3 2479848 12 - 202621043 CTCTCTCTATCG i panTro5.chr3 I 41 C 0 s gorGor5.CYUI01001831v1 52205 12 - 55620 CTCTCTCTATCG i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 954544 12 - 74750902 CTCTCTCTATCA i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107541 115 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e cerAty1.NW_012004056v1 503929 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=1116.000000 s hg38.chr3_KI270779v1_alt 144114 7 + 205312 CTCAGCA s panTro5.chr3 2479860 7 - 202621043 CTCAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107656 7 + 190779 CTCATCA i panPan2.chrUn_NW_014024201v1 I 115 C 0 s gorGor5.CYUI01001831v1 52217 7 - 55620 CTCAGCA i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 503929 1 + 16847902 ----G-- i cerAty1.NW_012004056v1 C 0 C 0 s calJac3.chr17 954556 5 - 74750902 CTCAG-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431369 2 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=41559.000000 s hg38.chr3_KI270779v1_alt 144121 27 + 205312 GGTGTGGACACCCTCTCTCCATCGCTC s panTro5.chr3 2479867 27 - 202621043 GGTGTAGACACCCTCTCTCCATCGCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107663 27 + 190779 GGTGTGGACACCCTCTGTCTATCGCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52224 27 - 55620 GGTGTGGACACCCTCTCTCTATCGCTC i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 503930 27 + 16847902 GGTGTGGACACCCTCTCTCCATCGCTC i cerAty1.NW_012004056v1 C 0 I 13 s chlSab2.chr15 431367 27 - 91754291 GGTGTAGACACCCTCTCTCCATAACTC i chlSab2.chr15 T 2 C 0 s calJac3.chr17 954561 26 - 74750902 GGGGTGGA-GCTCTCTCCCCATCACTC i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=14788.000000 s hg38.chr3_KI270779v1_alt 144148 21 + 205312 AGCAGGTGTGGACACCCTCTC s panTro5.chr3 2479894 20 - 202621043 AG-AGGTGTAGACACCCTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107690 21 + 190779 AGCAGGTGTGGACACCCTCTC i panPan2.chrUn_NW_014024201v1 C 0 T 31 s gorGor5.CYUI01001831v1 52251 21 - 55620 AGCAGGTGTGGACACCCTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 431394 21 - 91754291 AGGGGGTGTAGACACCCTCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954587 17 - 74750902 --AGGGGGTGGAGTGTCTC-- i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=755.000000 s hg38.chr3_KI270779v1_alt 144169 1 + 205312 T s panTro5.chr3 2479914 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107680 1 + 190779 T i panPan2.chrUn_NW_014024201v1 T 31 C 0 s gorGor5.CYUI01001831v1 52272 1 - 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s chlSab2.chr15 431415 1 - 91754291 C i chlSab2.chr15 C 0 I 137 s calJac3.chr17 954604 1 - 74750902 T i calJac3.chr17 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=22328.000000 s hg38.chr3_KI270779v1_alt 144170 42 + 205312 CTATCGCTCA--------------GCAGGTGTGGACACCCTCTCGCCATCGCTCAG s panTro5.chr3 2479915 41 - 202621043 CTATCGCTCA---------------CGGGTGCAGACACCCTCTCTCCATCGATCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107681 40 + 190779 CTATCGCTCA--------------GCAGGTGTGGACACCCTCT--CCATCGCTCAG i panPan2.chrUn_NW_014024201v1 C 0 T 60 s gorGor5.CYUI01001831v1 52273 42 - 55620 CTATCGCTCA--------------GCAGGTGTGGACACCCTCTCTCTATCGCTCAG i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 954605 53 - 74750902 CCATCGCTCATCCCTCGGGGCGTGGGGGGTGCAG---CCCTCTCTCCATCATTGAG i calJac3.chr17 C 0 T 60 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=7215.000000 s hg38.chr3_KI270779v1_alt 144212 15 + 205312 CAGGTGTGGACACCC s panTro5.chr3 2479956 14 - 202621043 -GGGTGCAGACACCC i panTro5.chr3 C 0 I 28 s panPan2.chrUn_NW_014024201v1 107661 15 + 190779 CAGGTGTGGACACCC i panPan2.chrUn_NW_014024201v1 T 60 C 0 s gorGor5.CYUI01001831v1 52315 15 - 55620 CAGGTGTGGACACCC i gorGor5.CYUI01001831v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954658 60 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=21868.000000 s hg38.chr3_KI270779v1_alt 144227 47 + 205312 TCTCTCTATCGCTCAGCAGGTGTGGACACCCTCTCGCCATCGCTCAG s panTro5.chr3 2479998 47 - 202621043 TCTCTCTATTGCTCAGCAGGTGTAGACACCCTCTCTCCATTGCTCAT i panTro5.chr3 I 28 C 0 s panPan2.chrUn_NW_014024201v1 107676 45 + 190779 TCTGTCTATCGCTCAGCAGGTGTGGACACCCTCT--CCATCGCTCAG i panPan2.chrUn_NW_014024201v1 C 0 I 199 s gorGor5.CYUI01001831v1 52330 47 - 55620 TCTCTCTATCGCTCAGCAGGTGTGGACACCCTCTCTCTATCGCTCAG i gorGor5.CYUI01001831v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954658 60 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=3765.000000 s hg38.chr3_KI270779v1_alt 144274 13 + 205312 CAGGTGTGGACAC s panTro5.chr3 2480045 13 - 202621043 CAGGTGTGGACAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52377 13 - 55620 CAGGTGTGGACAC i gorGor5.CYUI01001831v1 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 954658 60 - 74750902 T e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=207.000000 s hg38.chr3_KI270779v1_alt 144287 1 + 205312 C s panTro5.chr3 2480058 1 - 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52390 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s calJac3.chr17 954598 1 - 74750902 T i calJac3.chr17 T 60 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476619 0 + 17725628 C e colAng1.NW_012118932v1 472416 128 + 7796314 I e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=375.000000 s hg38.chr3_KI270779v1_alt 144288 1 + 205312 C s panTro5.chr3 2480059 1 - 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52391 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s colAng1.NW_012118932v1 472544 1 + 7796314 C i colAng1.NW_012118932v1 I 128 C 0 s calJac3.chr17 954599 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476619 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 503957 13 + 16847902 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=27320.000000 s hg38.chr3_KI270779v1_alt 144289 30 + 205312 TCTCTCTATCGCTCA-------G-----CAGGTGTGGACACC- s panTro5.chr3 2480060 30 - 202621043 TCTGTCTATCGCTCA-------G-----CAGGTGTGGACACC- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52392 30 - 55620 TCTCTCTATCGCTCA-------G-----CAGGTGTGGACACC- i gorGor5.CYUI01001831v1 C 0 C 0 s cerAty1.NW_012004056v1 503970 30 + 16847902 TCTCTCCATGGCTCA-------G-----CAAGTGTAGACACC- i cerAty1.NW_012004056v1 I 13 C 0 s colAng1.NW_012118932v1 472545 30 + 7796314 TCTCTCCATGGCTCA-------G-----CAGGTGTAGACACC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954600 43 - 74750902 TCTCTCCATCGCTCATCCCTCGGGGCGTGGGGGGTGCAGCCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476620 38 + 17725628 TCTCTCTATGACTCATCCCTTGG-----TGGGGGTGCAGCCCT i saiBol1.JH378146 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e otoGar3.GL873829 431949 0 - 608964 C e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I e nomLeu3.chr11 120907016 0 + 123690457 C a score=2100.000000 s hg38.chr3_KI270779v1_alt 144319 1 + 205312 C s panTro5.chr3 2480090 1 - 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52422 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907016 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 954643 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476658 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 431949 1 - 608964 C i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472575 0 + 7796314 C e manLeu1.NW_012102020v1 609256 164 - 1977891 I e chlSab2.chr15 431416 137 - 91754291 I e cerAty1.NW_012004056v1 504000 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202483895 159 + 204787373 I a score=3652.000000 s hg38.chr3_KI270779v1_alt 144320 1 + 205312 T s panTro5.chr3 2480091 1 - 202621043 T i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52423 1 - 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907017 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484054 1 + 204787373 T i rheMac8.chr2 I 159 C 0 s cerAty1.NW_012004056v1 504000 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431553 1 - 91754291 T i chlSab2.chr15 I 137 C 0 s manLeu1.NW_012102020v1 609420 1 - 1977891 T i manLeu1.NW_012102020v1 I 164 C 0 s colAng1.NW_012118932v1 472575 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954644 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476659 1 + 17725628 T i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 431950 1 - 608964 A i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e mm10.chr16 65448038 0 - 98207768 C e dasNov3.JH569502 3910271 9 + 6579706 I e canFam3.chr33 29083026 3 + 31377067 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e macFas5.chr2 83084 14732 + 192460366 M a score=6175.000000 s hg38.chr3_KI270779v1_alt 144321 1 + 205312 C s panTro5.chr3 2480092 1 - 202621043 C i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52424 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907018 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484055 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504001 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431554 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609421 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472576 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954645 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476660 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 431951 1 - 608964 C i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29083029 1 + 31377067 C i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3910280 1 + 6579706 C i dasNov3.JH569502 I 9 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e mm10.chr16 65448038 0 - 98207768 C e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e macFas5.chr2 83084 14732 + 192460366 M a score=162157.000000 s hg38.chr3_KI270779v1_alt 144322 36 + 205312 TCCATCGCTCAGTCGCCCTCTCATGCTGTGTTCGGA--- s panTro5.chr3 2480093 36 - 202621043 TCCATCGCTCAGTCGCCCTCTCATGCTGTGTTCGGA--- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52425 36 - 55620 CCCATCGCTCAGTCGCCCTCTCATGCTGTGTTCGGA--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907019 36 + 123690457 TCCATCGCTGAGTCGCCCTCTCATGGTGTGTTCCAA--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484056 33 + 204787373 ACCATTGCTGAGTCGCCCTCACATGGTGCGTCC------ i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504002 33 + 16847902 ACCATTGCTGAGTCGCCCTCTCATGGTGCGTCC------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431555 33 - 91754291 ACCATTGCTGAGTCGCCCTCTCATGGTGCGTCC------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609422 33 - 1977891 ACCATTGCTGAGTCGCCCTCTCATGGTGCGTCC------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472577 33 + 7796314 ACCATTGCTGAGTCGCCCTCTCATGGTGTGTCC------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954646 33 - 74750902 TCCATCATTGAGTCGCCCTCTGATGGTGTATTC------ i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 476661 33 + 17725628 TCCATCGCTGAGTCACCCTCTGATGGTGTATTC------ i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 431952 32 - 608964 CCCATCA-TGTGCTGCCTTCTCAGAGTGTGTCC------ i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65448038 33 - 98207768 TCCCTTACTGTGCTGAGCTCTCATTGGGTGTCC------ i mm10.chr16 C 0 I 3 s canFam3.chr33 29083030 33 + 31377067 CCCATCACGGTGTTGCCCTACCTTAGGGTGTCC------ i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3910281 36 + 6579706 TCCACTGCTGTTTAGGCTTCTCATAGTGTGTCC---TGA i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e aotNan1.NW_018492867v1 18968 107 + 21398 I e cebCap1.NW_016107444v1 441184 361 - 6778120 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e macFas5.chr2 83084 14732 + 192460366 M a score=114609.000000 s hg38.chr3_KI270779v1_alt 144358 20 + 205312 CTCAGCCTCC-------TCCCTCAGGG s panTro5.chr3 2480129 20 - 202621043 CTCAACCTCC-------TCCCTCAGGG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52461 20 - 55620 CTCAGCCTCC-------TCCCTCGGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907055 20 + 123690457 CTCAGCCTCC-------TCCCTGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484089 19 + 204787373 CACAGCCTCC--------CCCTGAGGG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504035 19 + 16847902 CACAGCCTCC--------CCCTGAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431588 19 - 91754291 CACAGCCTCC--------CCCTGAGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609455 19 - 1977891 CACAGCCTCC--------CCCTGAGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472610 20 + 7796314 CACAGCCTCC-------TCCCTGAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954681 20 - 74750902 CTCAGCCTCC-------TCCCTGTGGG i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 476694 13 + 17725628 -----ACTCC-------TCTC--AGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441545 20 - 6778120 CTCAGCCTCC-------TCCCTGAGGG i cebCap1.NW_016107444v1 I 361 C 0 s aotNan1.NW_018492867v1 19075 20 + 21398 CTCAGCCCCC-------TCCCTGAGGG i aotNan1.NW_018492867v1 I 107 C 0 s otoGar3.GL873829 431987 19 - 608964 CTGAGCCCCT--------TCTTGTGGG i otoGar3.GL873829 I 3 C 0 s mm10.chr16 65448074 16 - 98207768 ------CTCC-----TGTCCCTGAGGG i mm10.chr16 I 3 C 0 s canFam3.chr33 29083066 27 + 31377067 CTCAGCCCGCCACCCCGCCCCTGAGGG i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3910317 21 + 6579706 CCAAGCCTCC------CTGGCTGAGAG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7433101 366 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e macFas5.chr2 83084 14732 + 192460366 M a score=428794.000000 s hg38.chr3_KI270779v1_alt 144378 62 + 205312 CCACAGGAGCCAGGACTGTCCCTCCAACTCTGCTCCAGGAGGC----------------AGG---------GACCAGGGGGCCAGAG- s panTro5.chr3 2480149 62 - 202621043 CCACAGGAGCCAGGACTGTCCCTCCAACTCTGCTCCAGGAGGC----------------AGG---------GACCAGGGGGCCAGAG- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52481 62 - 55620 CCACAGGAGCCAGGATTGTCCCTCCAACTCTGCTCCAGGAGGC----------------AGG---------GACCAGGGGGCCAGAG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907075 62 + 123690457 CCACAGGAGCCAGGACTGTCCTTCCAACTCCGCTCCAGGAGAC----------------AGG---------GACCAGCGGGCCAGAG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484108 61 + 204787373 CCGCGGGAGCCAGGACGGCCCCTCCAACTCCG-TCCAGGGGAC----------------AGG---------GACCGGGGGGCCAGAG- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504054 55 + 16847902 CCGCGGGAGCCAGGACGGCCCCTCCAACTCCGCTCCAGGGGAC----------------AGG---------GACGGGGTG-------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431607 54 - 91754291 CCGCGGGAGCCAGGACGGCCCCTCCAACTTCG-TCCAGGGGAC----------------AAG---------GACCAGGGG-------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609474 55 - 1977891 CCGCGGGAGCCAGGACGGCCCCTCCAACTCCGCTCCAGGGGAC----------------AGG---------GACGGGGTG-------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472630 59 + 7796314 CCGCGGGAGCCAGGACGGCCCCTCCAGCTCCGCTCCAGGATTC----------------AGG---------GACCGGGCC---GGAG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 954701 60 - 74750902 GTGCAGGAGCCAGGACTGCCCTTCCAA--CTGCTCCAGGAGAC----------------AGA---------GACCCGGGGGCCAGAG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476707 62 + 17725628 GTGAAGGAGCCAGGACTGCCCTTCCAACTCTGCTCCAGGAGAC----------------AGG---------GACCCAGGGGCCAGAG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441565 62 - 6778120 GTGCAGGAGCCAGGACTGCCCTTCCAACTCTGCTCCAGGAGAC----------------AGG---------GACCGGGGGGCCAGAG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19095 62 + 21398 GTGCAGGAGCCAGGACTGCCCTTCCAGCTCTGCTCCAGGAGAC----------------AGG---------GACCCAGGGGCCAGAG- i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7433467 62 + 22200726 CCACAGGGGCCAGGACGGCCCTTCCCACTCTGCCCCAGGGGAC----------------ATG---------GACCAGGGGACCAGAG- i proCoq1.NW_012133858v1 I 366 I 320 s otoGar3.GL873829 432006 63 - 608964 CAACAGAGCCCAGGGCCACCCTTCCAACTCTGCTCCAGGAGAC----------------ACGCA-------GACCAGAAG-CCAGAG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448090 38 - 98207768 CAAGAAAAGCCAGGTTTGCTGTTC----------CCAGGGAAT----------------CAG---------GA--------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29083093 70 + 31377067 CTGCAGGGGCCATGGCTGCCATTCCAACTCTCCTCCAGGAGACGCGGCTACTTGGCCTGAGG---------AACCAGGA--------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3910338 72 + 6579706 CCTCAGGGGCCAGGATTGTCACTCCAACCCTACTCAAGGAGAC----------------ATGGAGTACTTGGACCAGGAAACCAGGAA i dasNov3.JH569502 C 0 C 0 e micMur3.chr1 25918317 1133 - 114275543 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e macFas5.chr2 83084 14732 + 192460366 M a score=135647.000000 s hg38.chr3_KI270779v1_alt 144440 33 + 205312 ACAAATCCCAGAAGGTGGAAACGGCAGGAACAG- s panTro5.chr3 2480211 33 - 202621043 ACGAATCCCAGAAGGTGGAAACGGCAGGAACAG- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52543 33 - 55620 ACGAATCCCAGAAGGTGGAAAGGGCAGGAACAG- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907137 27 + 123690457 ACTAATCCCAGAAGGTGGAAATGG------CAG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484169 33 + 204787373 ACTAATGCCAGAACGCGGGCACGGCGGGAACAG- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504109 25 + 16847902 --------CAGAACGCGGGCACAGCGGGAACAG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431661 27 - 91754291 ------GCCAGAACGCGGGCAGGGCGGGAACAG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609529 27 - 1977891 ------GCCAGAACGCGGGCACGGCGGGAACAG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 472689 33 + 7796314 ACTAACCCCAGAACGCGGGAGCGGCCGGAACAG- i colAng1.NW_012118932v1 C 0 I 927 s calJac3.chr17 954761 33 - 74750902 ACTAATCACAGAACATGGAAACGACAGGAACAG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476769 31 + 17725628 ACTAATCACAGAACATGGGGACGACAGGAAT--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441627 33 - 6778120 ACGAATCACAGAACATGGAAACGACAGGAACAG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19157 33 + 21398 ACTAATCACAGAACATGGAAACGACAGGAACAG- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432069 33 - 608964 GTTCATTGTGGAAAATAGAGATACCATGAACCA- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65448128 33 - 98207768 AGTAACCCAGGGAAATAGAAATGGCGAGAACCA- i mm10.chr16 C 0 I 1 s canFam3.chr33 29083163 33 + 31377067 AACATTCATAGAAAATGTACACAGCATTAAAAG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3910410 34 + 6579706 ATAATTACAAAAAAACATCAACAGCATGAAATGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7433529 320 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e macFas5.chr2 83084 14732 + 192460366 M a score=198762.000000 s hg38.chr3_KI270779v1_alt 144473 62 + 205312 TCCAGTTTCCCAAGTGTA-GCTTTTTACTCCT-------GAGAAGGCCCCGCAGAAGCAGCGGTGGGC-----------------------------------------------CC- s panTro5.chr3 2480244 60 - 202621043 TCCAGTTCCCCAAGAGTA-GCTTTTTACTCCT-------GAGAAGGCCCCGCAGAAGCAGCGGTGGGT-------------------------------------------------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 52576 62 - 55620 TCCAGTTTCCCAAGTGTG-GCTTTTCACCCCT-------GAGAAGGCACCGCAGAAGCAGCGGTGGGC-----------------------------------------------CC- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907164 62 + 123690457 TCTGGTTTCCCAAGTGTA-GCTTTTTACTCCT-------GAGAAGGCCCCGCAGAAGCAGCGGTGGGC-----------------------------------------------CC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484202 61 + 204787373 CTCCGTTTCCCAAGCGCA-GCGTTTTGCTCCG-------GGGAAGGCCGCGCAG-AGCAGCGCTGGGC-----------------------------------------------CC- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504134 61 + 16847902 CTCCCTTTCCCAAGCGCA-GCGTTTTGCTCCG-------GGGAAGGCCGCGCAG-AGCAGCGCTGGGC-----------------------------------------------CC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431688 61 - 91754291 CTCCGTTTCCCAAGCGCA-GCGTTTTGCTCCT-------GGGAAGGCCGCGCAG-AGCAGCGCTGGGC-----------------------------------------------CC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609556 61 - 1977891 CTCCGTTTCCCAAGCGCA-GCGTTTTGCTCCG-------AGGAAGGCCGCGTAG-AGCAGCGCTGGGC-----------------------------------------------CC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954794 73 - 74750902 TCAAGTTTCCCAAGCTTA-GCTTTTTACTCAT-------AAGAAGGCCCCGCAGAAGTAGCGGTGAGCTGG--------------------------GGGCCGGG----------CC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476800 74 + 17725628 TCAAGTTTCCCAAGTGCAGGTTTTTTGCTTAG-------AAGAAGGCCCCGCAGAAGGAGCGGCGAGCTGG--------------------------GGGCAGGG----------CA- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441660 74 - 6778120 TCAAGTTTCCCAAGTGCAGCTTTTTTACTTAT-------AAGAAGGCCCCGCAGAAGTAGCGGTGAGCTGC--------------------------GGGGTGGG----------CG- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19190 74 + 21398 TCAAGTTTCCCAAGTGCAGCTTTTTTACTTAT-------AAGAAGGCCTCGCAGAAGTAGCGGTGGGCTGG--------------------------GGGCGGGG----------CG- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432103 101 - 608964 GCCAATTCCCCAGGTATG-GCTTCTTACTCCT-------AAAAAGGCCCAGGAA-CACAGCAGGGAGCTGGCTGGGCC-------CTCTTCACATCAGGATGGAGACACCTTATCCA- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65448162 67 - 98207768 TCAAGTTT-CTAAGCTTA-GCTTCTTCCTCAGTTTAAAAAAAAAAAATCTGTGA-AGCAGCCAGGATC-----------------------------------------------CC- i mm10.chr16 I 1 I 67 s canFam3.chr33 29083196 59 + 31377067 -GCAGTTTCCCAAATAGA-GCTTTCTCCTCAT-------AAAAAGGCCCTGAA--AATAGTGGAGAGCTT------------------------------------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3910444 104 + 6579706 TCAAGTTTACCAAGTATA-GCTTCTTTCTCAT-------AAAAAGTCCGAGTAA-AACACTAGAGAGCTTACGGGGCCCCCGGGTCTCTTTTTCCTGGGGTAATGATACA-----CTT i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7433529 320 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=10894.000000 s hg38.chr3_KI270779v1_alt 144535 6 + 205312 ---AGCAGG-- s gorGor5.CYUI01001831v1 52638 6 - 55620 ---AGCAGG-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907226 6 + 123690457 ---AGCAGG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484263 6 + 204787373 ---AGCAGG-- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504195 6 + 16847902 ---AGCAGG-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431749 6 - 91754291 ---AGCAGG-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609617 6 - 1977891 ---AGCAGG-- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954867 6 - 74750902 ---TGCAGG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476874 6 + 17725628 ---CATGGG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441734 6 - 6778120 ---TGCAGG-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19264 6 + 21398 ---TGCAGG-- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432204 6 - 608964 ---CACAGG-- i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 29083255 1 + 31377067 ------A---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3910548 11 + 6579706 GTCCACAGGGG i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7433529 320 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e mm10.chr16 65448229 67 - 98207768 I e panPan2.chrUn_NW_014024201v1 107721 199 + 190779 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2480304 0 - 202621043 C a score=197266.000000 s hg38.chr3_KI270779v1_alt 144541 43 + 205312 TGGGCAGCCCTCGC--CTGGCACCCTGT-----GTT-CCTCAGGCAGAGGC s panTro5.chr3 2480304 43 - 202621043 TGGGCAGCCCTCGC--CTGGCACCCGGT-----GTT-CCTCAGGCAGAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107920 43 + 190779 TGGGCAGCCCTCGC--CTGGCACCCGGT-----GTT-CCTCAGGCAGAGGC i panPan2.chrUn_NW_014024201v1 I 199 C 0 s gorGor5.CYUI01001831v1 52644 43 - 55620 TGGGCAGCCCTCGC--CTGGCACCCGGT-----GTT-CCTCAGGCAGAGGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907232 43 + 123690457 TGGGCAGCCCTCGC--CTGGCACCCGGT-----GTT-CCTCGGGCAGAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484269 41 + 204787373 -CGTCCGCCCTCGC--CTGGCGCCCCGT-----GTT-CCTC-GGCAGACGC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504201 41 + 16847902 -CGTCCGCCCTCGC--CTGGCGCCCCGT-----GTT-CCTC-GGCAGACGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431755 41 - 91754291 -CGTCCGCCCTCGC--CTGGCGCCCCGT-----GTT-CCTC-GGCAGACGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609623 41 - 1977891 -CGTCCGCCCTCGC--CTGGCGCCCCGT-----GTT-CCTG-GGCAGAGGC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954873 43 - 74750902 TGGGCAGCCTTCGC--CTGGCTCCCCGT-----GTT-ACTCGGCCAGAGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476880 45 + 17725628 CGGGCAGCCTTCGC--CTGGCTCCCGGCTCCCGGCT-GCTCGGCTGGA--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441740 43 - 6778120 TGGGCAGCCTTCGC--CTGGCACCCCGT-----GTT-GCTTGGCTAGAGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19270 43 + 21398 TGGGCAGCCTTCGC--CCGGCTCCCCGT-----GTT-GCTCGGCTGGAGGC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432213 44 - 608964 --GGGGGCCCTCTCAGAGGGAATCCAGC-----CTTCCCTCAGCCAGAGCC i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 29083256 29 + 31377067 ----------------CTGGACCCCGAG-----ACC-TCTATAGTAAGGTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3910559 43 + 6579706 TCAGGACCCCTTGC--CTAGCTGCCTGT-----CTT-CCTCAGTTAGTCCC i dasNov3.JH569502 C 0 C 0 e proCoq1.NW_012133858v1 7433529 320 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e mm10.chr16 65448229 67 - 98207768 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=56887.000000 s hg38.chr3_KI270779v1_alt 144584 9 + 205312 CTGACATT-A s panTro5.chr3 2480347 9 - 202621043 CTGACATT-A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107963 9 + 190779 CTGACATT-A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52687 9 - 55620 CTGACATT-A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907275 9 + 123690457 CTGACATT-A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484310 9 + 204787373 CTGACATT-A i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504242 9 + 16847902 CTGACATT-A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431796 9 - 91754291 CTGACATT-A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609664 9 - 1977891 CTGACATT-A i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954916 9 - 74750902 CTGACAGT-A i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 441783 9 - 6778120 CTGACATC-A i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19313 9 + 21398 CTGACATT-A i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432257 10 - 608964 CTGGTGGTAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448296 10 - 98207768 CTGACATAAA i mm10.chr16 I 67 C 0 s canFam3.chr33 29083285 1 + 31377067 ---------A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3910602 9 + 6579706 TTGATATT-A i dasNov3.JH569502 C 0 I 1352 e proCoq1.NW_012133858v1 7433529 320 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e saiBol1.JH378146 476925 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=502781.000000 s hg38.chr3_KI270779v1_alt 144593 126 + 205312 AGGAGGCTG----TGGGGATGGACG-----AGGGGCCCAGCCAAG------GCTGCTT---CCATTCCCGCTTCCTCTGGGTT------------------CCGTCTCGAAG--CAGGAGAGAGAAGT-GGGCCCTGGGAGTTCAGGC---------TGCGC--GGGCCGCAGCC-C s panTro5.chr3 2480356 126 - 202621043 AGGAGGCTG----CGGGGGTGGACG-----AGGGGCCCAGCCAAG------GCTGCTT---CCATTCCCTCTGCCTCTGGGTT------------------CCATCTCGAAG--CAGGAGAGAGAAGT-GGGCCCGGGGAGTTCAGGC---------TGCGC--GGGCCGCAGCC-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 107972 126 + 190779 AGGAGGCTG----TGGGGGTGGACG-----AGGGGCCCAGCCAAG------GCTGCTT---CCATTCCCTCTGCCTCTGGGTT------------------CCGTCTCGAAG--CAGGAGAGAGAAGT-GGGCCCGGGGAGTTCAGGC---------TGCGC--GGGCCGCAGCC-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52696 126 - 55620 AGGAGGCTG----TGGGGGTGAACG-----AGGGGCCCAGCCAAG------GCTGCTT---CCATTCCCGCTTCCTCTGGGTT------------------CCCTCTCGAAG--CTGGAGAGAGAAGT-GGGCCCGGGGAGTTCAGGC---------TGCGC--GGGCCGCAGCC-C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907284 126 + 123690457 AGGAGGCTG----TGGGGGTGGACG-----AGGGGCCCAGCCAAG------GCTGCTT---CCACTCCCGCTTCCTCTGGGTT------------------CCATCTCCAAG--CTGGAGAGAGAAGT-GGGCCCAGGGAGCTCAGGC---------CGCAT--AGGCCGCAGCC-C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484319 113 + 204787373 AGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG------GCTGCCT---CCACTCCTGCTTCCTCTGGGTT--------------------GTCTCGAAG--CTGGGGAGAGAAGC--GGCCCAGGGAGCCGA--------------------GGCCGCCGCC-G i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504251 113 + 16847902 AGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG------GCTGCCT---CCACTCCTGCTTCCTCTGGGTT--------------------GTCTCGAAG--CTGGGGAGAGAAGC--GGCCCAGGGAGCTGA--------------------GGCCGCCGCC-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431805 113 - 91754291 AGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG------GCTGCTT---CCTCTCCTGCTTCCTCTGGGTG--------------------GTCTCGAAG--CCGGGGAGAGAAGC--GGCCCAGGGAGCTGA--------------------GGCCGCCGCC-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609673 113 - 1977891 AGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG------GCTGCCT---CCACTCCTGCTTCCTCTGGGTT--------------------GTCTCGAAG--CTGGGGAGAGAAGC--GGCCCAGGGAGCTGA--------------------GGCCGCCGCC-G i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 954925 127 - 74750902 AGAAGGCTG----TGGAGGTGAACGAAACTAGAGGCCCAGCCAAG------GCTGCTT---CCACTCCCAGTTC--CTGGGTT------------------CCATCCTGAAG--CTGGAGAGAGAAGC-GGGCCCAGGGAGCTCAGGC---------TGTGC---GGCCTCAGTG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 476925 119 + 17725628 --------------GGAGGTGAACTGAACCAGGGGCCCAGCCAGG------GCTGCTT---CCACTGCCAGTTC--CTGGGTT------------------CCATCGTGAAG--CTGGAGAGAGAAGC-GGGCCCAGGGAGCTCAGGC---------TGCGC---GGTCGCAGTGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441792 129 - 6778120 AGAAGGCTG----TGGAGGTGCACTAAACTAGAGGCCCGGCCAAG------GCTGCCT---CCACCCCCAGTTC--CCGGGCT------------------CCATCGTGAAG--CTGGAGACAGAAGT-GGGCCCAGGGAGCTCAGGC---------TGCGC---GGCCGCAGTGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19322 129 + 21398 AGAAGGCTG----TGGAGGTGAACTAAACTAGGGGCCCAGCCAAG------GCTGCTT---CCACTCCCAGTTC--CTGGGTT------------------CCATCGTGAAG--CTGGAGAGAGAAGC-GGGCCCAGGGAGCTCAGGC---------TGCGC---GGCCGCAGTGGA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432267 140 - 608964 AGGAGGCTG----CAGATAGAAGCT-----GGGTGCCC-GACAAT------GGTGCTT---CCATTTCC-CTTCCTCTGGGTCAT-------------GGGCTGTCTCAGAG--CTGGGGAGAGAAGC-AGGCCCAGGCTGCCCAGGCCACCAGTCTTGTACTGGGGCTGCAGTG-G i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65448306 116 - 98207768 AGAAGGCTA----------CAAAAG-----TGTTGTACAGCAAAG--------TGACC---TCATTCTTTCTTCTGCTCTGTCAT-------------GGGCCATCTCT---------GCAGAGAAAC-AGGGCCCAAAAGAACAAAG---------AACAC--AGGCCACAGAC-A i mm10.chr16 C 0 I 20 s canFam3.chr33 29083286 148 + 31377067 AGACACTTGTCCCTGAGGGTAG--------GAGGGCCTTGCCTAGCTCCCAGTTGCTTGTCGCACACTTCCTTCCTCTGGGCCATGGTCATGGTCACAGGGCCATCGTCAAGCCCTAGAGAGAGAAGTAGAGTCTGGGAAGCACAGGT-----------CAC--AGGTC-------- i canFam3.chr33 C 0 I 22 e proCoq1.NW_012133858v1 7433529 320 + 22200726 I e micMur3.chr1 25918317 1133 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=1734877.000000 s hg38.chr3_KI270779v1_alt 144719 160 + 205312 GGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCAAGGGGGAAGCCAGTCGCCGGCTTGAAGAGTGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGTCTGCCCCATAGGGGAAGAGGGAAACTCCTGGGC---CAGGACAGAGAA s panTro5.chr3 2480482 160 - 202621043 GGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCAAGGGGGAAGCCTGTCGCCGGCTTGAAGAGTGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTTCAGGTCCCCGGCGCCTGCCCCATAGGGGAAGAGGGAAACTCCTGGGC---CAGGACAGAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108098 160 + 190779 GGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCAAGGGGGAAGCCTGTCGCCGGCTTGAAGAGTGGGGAGGTGAAGTCCACGGTCCTCCTGACAAACTTCAGGTCCCCGGCGCCTGCCCCATAGGGGAAGAGGGAAACTCCTGGGC---CAGGACAGAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52822 159 - 55620 GGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCAAGGGGGAAGCCAGTCGCCGGCTTGAAGAGTGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGCCTGCCCCATA-GGGAAGAGGGAAACTCCTGGGC---CAGGACAGAGAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907410 145 + 123690457 AGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCGAGGGGGAAGCCAGTCGCTGGCTTGAAGAGTGGGGAGGTGAAGTCCACAGTCCTCCTGACGAACTCCAGGTCCCCGGTGCCTGCCCCGTAGGGGAAGAGGGAAACTCC------------------AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484432 159 + 204787373 GGACTCACGTAGAGGGAATCGCGCAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGAGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGCCGACCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504364 159 + 16847902 GGACTCACGTAGAGGGAATCGCGCAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGAGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGGCGGCCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 431918 159 - 91754291 GGACTCACGTAGAGGGAATCGCGCAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGGGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCACCGGCCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609786 159 - 1977891 GGACTCACGTAGAGGGAATCGCGCAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGAGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGCCGGCCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 955052 159 - 74750902 -AACTCACATAGAGAGAATCCCGGAGAGAAGAGCCGAGGGGAAAGCCAGTCAGGGGCTTGAAGAGTGGGGAGGTGAAGTCCACAGTCCTCCTGACGAACTCCAGGTCCCCAGCGCCCGACCCGTAGGGGAGGAGGGAAACTCCTGGGC---CAGGACAAAGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477044 160 + 17725628 AAACTCACGTAGAGGGAATCCCGGAGAGAGGAGCCAAGGGGAAAGCCAGTCAGGGGCTTGAAGAGCGGGGAGGCGAAGTCCACAGTCCTCCTGACGAACTCCAGGTCCCCAGCGCCCGACCCGTAGGGGAGGAGGGAAACTCCTGGGC---CAGGACAAAGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 441921 160 - 6778120 GAACTCACGTAGAGGGAATCCCGGAGAGAGGAGCCGAGGGGAAAGCCAGTCAGGGGCTTGAAGAGTGGGGAGGTGAAGTCCACAGTCCTCCTGACGAGCTCCAGGTCCCCAGCGCCCGACCCGTAGGGGAGGAGGGAAACTCCTGGGC---CAGGACAAAGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19451 160 + 21398 GAACTCACGTAGAGGGAATCCCGGAGAGAGGAGCCGAGGGGAAAGCCAGTCAGGGGCTTGAAGAGCGGGGAGGTGAAGTCCACAGTCCTCCTGACGAACTCCAGGTCCCCAGCGCCCGACCCGTAGGGGAGGAGGGAAACTCCTGGGC---CAGGACAAAGAA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25919450 160 - 114275543 GGACTCACGTAGAGGGAATTCCGGAGAGAGGAGCCCAGGGGGAAGCCGATCTGGGGCTGGAAGAGCCGTGAGGTGAAGTCCTGAGTCCTCCTGACAAGCTTCCGGTCTCCGACGCGCGGCCCATAGCGGAAGAGGGAAACGCCTGGGC---CAGGGCAAAGAA i micMur3.chr1 I 1133 C 0 s proCoq1.NW_012133858v1 7433849 160 + 22200726 GGACTCACGTAGAGGGAATCCCGGAGAGAGGAGCCGAGGGGGAAGCCGATCTGGGGCTCGAAGAGCGGTGAGGTGAAGTCCTCGGCCCTCCTGACAAACTTCCGGTCTCCGACGTGCTGCCCGTAGCGGAAGAGGAGAACGCCTGGGC---CCGGGCAAAGGA i proCoq1.NW_012133858v1 I 320 C 0 s otoGar3.GL873829 432408 160 - 608964 GGACTCACATAGAGAGAATCCCGAAGAGAGGAGCCGAGAGGGAAGCCGATCTGGGGCTTGAAGAGCGGTGAGGTGAAGTCCTCCATCCTCCTGACAAACTCCAGGTCGCCAGCGCTTTGCCCATAGGGGAAGAGGGAAACACCTGGGC---CAGGACAAAGGA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65448442 160 - 98207768 AGACTCACGTAGAAGGAATCCCGCAGGGAGGAACCGAGGGGAAAGCCAATCAGGATCTTGAAGATTGGTGAGTTAAAATCCACAGTCCTGGCAAACAAATTCTGGTCTCCGACTTCAGACCCGTAGGGGAAGAGGGAAATGCCTAGAC---AAGGACAGAGGA i mm10.chr16 I 20 C 0 s canFam3.chr33 29083456 163 + 31377067 GGACTCACATAGAGGTAATCCCGGAGAGAGGAGCCAAGAAGGAAGCCAATCTGGGGCCTGAAGAGTGGTGAGGTGAAGTCCGTGGTCCTCTCGACAAACTCCCTGTCTCCAACACTTGGCCCGTAAGGGAAGAGGGAAACGCCTGGGCCAGCAGGACAAAGGA i canFam3.chr33 I 22 C 0 e dasNov3.JH569502 3910611 1352 + 6579706 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=71218.000000 s hg38.chr3_KI270779v1_alt 144879 7 + 205312 GAGCAGG s panTro5.chr3 2480642 7 - 202621043 GAGCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108258 7 + 190779 GAGCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52981 7 - 55620 GAGCAGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907555 7 + 123690457 GAGCAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484591 7 + 204787373 GAGCAGG i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504523 7 + 16847902 GAGCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432077 7 - 91754291 GAGCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609945 7 - 1977891 GAGCAGG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 955211 7 - 74750902 GAGCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477204 7 + 17725628 GAGCAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442081 7 - 6778120 GAGCAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19611 7 + 21398 GAGCAGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25919610 7 - 114275543 GAGTAGG i micMur3.chr1 C 0 I 146 s proCoq1.NW_012133858v1 7434009 7 + 22200726 CAGTAGG i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 432568 7 - 608964 GAGTGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448602 7 - 98207768 GAGAGCA i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=340067.000000 s hg38.chr3_KI270779v1_alt 144886 45 + 205312 AAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGAAAGGGATCCC s panTro5.chr3 2480649 45 - 202621043 AAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGAAAGGGATCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108265 45 + 190779 AAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGAAAGGGATCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 52988 45 - 55620 AAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGAAAGGGATCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907562 45 + 123690457 AAGCCCAAGTGGGCCTGGGCCTGCTTTAGGGCTGAAAGGGATCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484598 45 + 204787373 ACGTCCGAGGGGGCCTGGGCCTTCTTTAGGGCCGAAAGGGATCCC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504530 45 + 16847902 ACGTCCGAGGGGGCCTGGGCCTTCTTTAGGGCCGAAAGGGATCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432084 45 - 91754291 ACGTCCGAGGGGGCCTGGGCCTTCTTTAGGGCCGAAAGGGATCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609952 45 - 1977891 ACGTCCGAGGGGGCCTGGGCCTTCTTTAGGGCCGAAAGGGATCCC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 955218 33 - 74750902 ACGTCCAAGTGGGCCT------------GGGCTGGAAGGGATCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477211 45 + 17725628 AAGTCCAGGTGGGCCTGGGCCTTCTTTAGGGCTGGAAGGGATCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442088 45 - 6778120 AAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGGACGGGGTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19618 45 + 21398 AAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGGAAGGGATCCC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7434016 45 + 22200726 AGGTCCTCATGGGCCTTGGCCTTCGTCAGGGCCGGAAGGGACCCC i proCoq1.NW_012133858v1 C 0 I 85 s otoGar3.GL873829 432575 36 - 608964 AAGTCCGCAGGGGTCT---------TCAGGGCTGAAAGGGATACT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448609 44 - 98207768 GAGTCCTTGAGGGTC-ATCCCTCCTTTCAGGTTCAGGAGGACCCT i mm10.chr16 C 0 I 1 e micMur3.chr1 25919617 146 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=461263.000000 s hg38.chr3_KI270779v1_alt 144931 113 + 205312 AGAGCGCTCCCCGCAGGCTGCCC-ACACCTGTCCTGTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCTAGG-----GTGCTTCTCGCTCCCTCTCCACCCACATTAAATGCATGTGGTCA s panTro5.chr3 2480694 113 - 202621043 AGATCGCTCCCCGCAGGCTGCCC-ACACCTGTCCCGTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCGAGG-----GTTCTTCTTACTCCCTCTCCACCCACATTGAATGCATGTGGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108310 113 + 190779 AGATCGCTCCCCGCAGGCTGCCC-ACACCTGTCCCGTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCGAGG-----GTTCTTCTTACTCCCTCTCCACCCACATTGAATGCATGTGGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53033 111 - 55620 AGAGCGCTCCCCGCAGGCTGCCC-ACACCTGTCCCGTGTTCCCCAAGGG-CCCAGAGT----------CAGCCATC-AGG-----GTGCTTCTCGCTCCCTCTCCACCCACATTGAATGCATGTGGTCA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907607 113 + 123690457 AGAGTGCTCCCCGCACACTGCCC-GCACCTGTCCCCTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCGAGG-----GTTCTTGTTGCTCCCTCTCCACCCACACTGAATGCATGTGGTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484643 111 + 204787373 AGAGCCCTCCCCGCGCGCTGCGC-GCACCTGCCCC--GTTCCCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGCTCCCTCTCCACCCACACCGAACGCATGTGGTCA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504575 111 + 16847902 AGAGCGCTCCCCGCGCGCTGCGC-GCACCTGCCCC--GTTCCCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGTTCCCTCTCCACCCACACCGAACACATGTGGTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432129 110 - 91754291 AGAGCGCTCCCCGCGCGCTGCGC-GCACCTGCCCC--GTT-CCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGCTCCCTCTCCACCCACACCGAACGCATGTGGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 609997 110 - 1977891 AGAGCGCTCCCCGCGCGCTGCGC-GCACCTGCCCC--GTT-CCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGTTCCCTCTCCACCCACACCGAACACATGTGGTCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 955251 119 - 74750902 AGAGAC--CCCCCCACGCTGCCCCGCACCTGCCCTCTCCACCCCGATGGCCCCAGAGGCCCTGCCAGCCAGCCATCCAGG-----GTTCTT---GCTCCCTCTCCACCCGCGTTGAGCGCACGCCGTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477256 110 + 17725628 AGAGAC-TCCCCCCAGGCTGCCCTGCACCTGCCCTCTGTTCCCCGGT-GCCCCAGAGGCCCT----GCCAGCCGTCAAGG-----GTTCTT---GCTCCCTCTCCACCCGCGTTGAACG-----CGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442133 116 - 6778120 AGAGAC--CCCCCCACGCTGCCC-GCACCTGCCCTGTGTT-CCCGACGGCCCCAGAGGCCCTGCCAGCCAGCCGTCAAGG-----GTTCTT---GCTCGCTCTCCA-CCGCATGGAGCACACGTCGTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19663 119 + 21398 AGAGAC--TCCCCCACGCTGCCCCGCACCTGCCCTCTGTTCCCCGACGGCCCCAGAGGCCCTGCCAGCCAGCCATCAAGG-----GTTCTT---GCACCCTCTCCACCCGCACTGGACACACGTCGTCA i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432611 68 - 608964 ------------------------GGAGCTTTCCCCAGTCC---------------GG----------AAACTATCCCAG-----TCTCCT----CTCCCTCTCCACTAGAATTTAATACATCTCA--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448654 83 - 98207768 AGAGAGCTTCCC----------C-TAACCTGTCTCCTCTT-----------TCAGAAG----------CAACTCCCGTAGACCTTACTCTTCGTTCCACCTCTCCATACACATCT-------------- i mm10.chr16 I 1 C 0 e proCoq1.NW_012133858v1 7434061 85 + 22200726 I e micMur3.chr1 25919617 146 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=124878.000000 s hg38.chr3_KI270779v1_alt 145044 20 + 205312 TTTTACTCCCTAAACTGCGC s panTro5.chr3 2480807 20 - 202621043 TTTTACTCCCTAAACTGCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108423 20 + 190779 TTTTACTCCCTAAACTGCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53144 20 - 55620 TTTTACTCCCTAAACTATGC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907720 20 + 123690457 TTTTACTCCCTAAACTGCGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484754 19 + 204787373 TTTTACTCCC-GAACTGCGC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504686 19 + 16847902 TTTTACTCCC-GAACTGCGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432239 19 - 91754291 TTTCACTCCC-GAACTGCGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610107 19 - 1977891 TTTTACTCCC-GAACTGCGC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 955370 20 - 74750902 TTTTACTCCCTACACTGTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477366 20 + 17725628 TTTTGCTCCCTACACTGTGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442249 20 - 6778120 TTTTACTCCCTGCCCTGCGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19782 20 + 21398 TTTTACTCCCTAAACTGCGC i aotNan1.NW_018492867v1 C 0 C 0 s proCoq1.NW_012133858v1 7434146 20 + 22200726 TTTTACTCCCCAACCTGGGA i proCoq1.NW_012133858v1 I 85 C 0 s otoGar3.GL873829 432679 19 - 608964 TTTTACT-CCCAGCCTGGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448737 19 - 98207768 GTTTACTTCT-CAGCTGGAA i mm10.chr16 C 0 C 0 e micMur3.chr1 25919617 146 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=471657.000000 s hg38.chr3_KI270779v1_alt 145064 46 + 205312 CTCTCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTCCTGCTGTCAGA s panTro5.chr3 2480827 46 - 202621043 CTCTCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTTCTGCTGTCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108443 46 + 190779 CTCTCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTTCTGCTGTCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53164 46 - 55620 CTCTCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTCCTGCTGTCAGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907740 46 + 123690457 CTCTCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTCCTGCTGTCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484773 46 + 204787373 CTCTCATCCTTCCCCAGCTCGGAGGA-------AAACAGGTCCTGCTGGCAGA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504705 46 + 16847902 CTCTCATCCTTCCCCAGCTCGGAGAA-------AAACAGGTCCTGCTGTCAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432258 46 - 91754291 CTCTCATCCTTCCCCAGCTCGGAGGA-------AAACAGGTCCTGCTGGCAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610126 46 - 1977891 CTCTCATCCTTCCCCAGCTCGGAGAA-------AAACAGGTCCTGCTGTCAGA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 955390 46 - 74750902 CTGGCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTCCTGCTGTCAGA i calJac3.chr17 C 0 I 20 s saiBol1.JH378146 477386 46 + 17725628 CTGGTATCCTTCCCCAGCCTGGAGAA-------AAACGGGTCCTGCTGTCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442269 46 - 6778120 CTGGCACCCCTCCCCAGCTTGGAGGA-------AAACAGGTCCTGCTGTCAGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19802 46 + 21398 CTGGCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTCCTGCTGTCAGA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25919763 46 - 114275543 CTCTCATCCTTCCCCAGCTTGGAGAA-------AAACAGGTCCCGCTGTCAGA i micMur3.chr1 I 146 C 0 s proCoq1.NW_012133858v1 7434166 46 + 22200726 CTCTCATCCTTCGCCAGCTTGGAGAA-------AAACAGGCCCTGCTGTCAGA i proCoq1.NW_012133858v1 C 0 C 0 s otoGar3.GL873829 432698 45 - 608964 CTCTCGTCCTTCCCCAGCTTGGGGAA-------AAGCTGGTCCTGCTGTCAG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448756 53 - 98207768 CCCTCATCATCCCTCAGGTTAGAGCATCCTGACATGACCGTCCTGCTGTTAGG i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=71567.000000 s hg38.chr3_KI270779v1_alt 145110 11 + 205312 ATACCAGCAAA s panTro5.chr3 2480873 11 - 202621043 ATACCAGCAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108489 11 + 190779 ATACCAGCAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53210 11 - 55620 ATACCAGCAAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907786 11 + 123690457 ATACCAGCAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484819 10 + 204787373 AT-CCAGCAAA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504751 11 + 16847902 ATACCCGCAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432304 11 - 91754291 ATACCAGCAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610172 11 - 1977891 ATACCCGCAAA i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477432 10 + 17725628 ATGCCAG-CAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442315 11 - 6778120 ATACCAGCCAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19848 11 + 21398 ACACCAGCAAA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25919809 11 - 114275543 ATCCCAACAAA i micMur3.chr1 C 0 I 26 s proCoq1.NW_012133858v1 7434212 11 + 22200726 ACACCAACAAA i proCoq1.NW_012133858v1 C 0 I 252 s otoGar3.GL873829 432743 11 - 608964 ATGCCAGCAAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448809 11 - 98207768 ATAGCACCATA i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=18764.000000 s hg38.chr3_KI270779v1_alt 145121 4 + 205312 CGAT s panTro5.chr3 2480884 4 - 202621043 CGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108500 4 + 190779 CGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53221 4 - 55620 CGAT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907797 4 + 123690457 CGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484829 4 + 204787373 CGAT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504762 3 + 16847902 CAA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432315 4 - 91754291 CGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610183 4 - 1977891 CGAT i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477442 4 + 17725628 CGAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442326 4 - 6778120 CGAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19859 4 + 21398 CGAT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432754 1 - 608964 ---T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65448820 4 - 98207768 GGAT i mm10.chr16 C 0 I 13 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919820 26 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=13370.000000 s hg38.chr3_KI270779v1_alt 145125 5 + 205312 TCTCA-- s panTro5.chr3 2480888 5 - 202621043 TCTCA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108504 5 + 190779 TCTCA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53225 5 - 55620 TCTCA-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907801 5 + 123690457 TCTCA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484833 5 + 204787373 TCGCC-- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504765 5 + 16847902 TCGCC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432319 5 - 91754291 TCGCC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610187 5 - 1977891 TCGCC-- i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477446 5 + 17725628 TCTCA-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442330 5 - 6778120 TCTCA-- i cebCap1.NW_016107444v1 C 0 I 36 s aotNan1.NW_018492867v1 19863 5 + 21398 TCTCA-- i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 432755 7 - 608964 ACTCCGC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919820 26 - 114275543 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=21291.000000 s hg38.chr3_KI270779v1_alt 145130 8 + 205312 ATCTCT----TA----- s panTro5.chr3 2480893 8 - 202621043 ATCTCT----TA----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108509 8 + 190779 ATCTCT----TA----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53230 8 - 55620 ATCTCT----TA----- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907806 8 + 123690457 ATCTCT----TA----- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484838 12 + 204787373 ATCTCTTAGGTA----- i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504770 12 + 16847902 ATCTCTTAGGTA----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432324 12 - 91754291 ATCTTTTAGGTA----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610192 12 - 1977891 ATCTCTTAGGTA----- i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477451 8 + 17725628 GTCTCT----TA----- i saiBol1.JH378146 C 0 I 5 s aotNan1.NW_018492867v1 19868 8 + 21398 GTCTCT----TA----- i aotNan1.NW_018492867v1 C 0 I 30 s otoGar3.GL873829 432762 13 - 608964 ATCTGT----TGTGGCA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919820 26 - 114275543 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=11347.000000 s hg38.chr3_KI270779v1_alt 145138 5 + 205312 GT--C----TC s panTro5.chr3 2480901 5 - 202621043 GT--C----CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108517 5 + 190779 GT--C----CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53238 9 - 55620 GT--TAGTGCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907814 7 + 123690457 GTACC----CC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484850 5 + 204787373 GT--C----CC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504782 5 + 16847902 GT--C----CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432336 5 - 91754291 GC--C----CC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610204 5 - 1977891 GT--C----CC i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477464 5 + 17725628 GT--C----CC i saiBol1.JH378146 I 5 C 0 s otoGar3.GL873829 432775 5 - 608964 GT--C----AC i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919820 26 - 114275543 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=105898.000000 s hg38.chr3_KI270779v1_alt 145143 19 + 205312 AATCCTTTTCAGGGTTAAA s panTro5.chr3 2480906 19 - 202621043 AGTCCTTTTCAGGGTTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108522 19 + 190779 AATCCTTTTCAGGGTTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53247 19 - 55620 AATCCTTTTCAGGGTTAAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907821 19 + 123690457 AATCCTTTTCAGGGTTAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484855 19 + 204787373 AATCCTTTTCAGGGTTAAA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504787 19 + 16847902 AATCCTTTTCAGGGTTAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432341 19 - 91754291 GATCCTTTTCAGGGTTAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610209 19 - 1977891 AATCCTTTTCAGGGTTAAA i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477469 19 + 17725628 GATCCTTTTCAGGGTTAAA i saiBol1.JH378146 C 0 C 0 s micMur3.chr1 25919846 19 - 114275543 AATTCTTTTAAGGGTTAAA i micMur3.chr1 I 26 C 0 s otoGar3.GL873829 432780 19 - 608964 AGTTCTTTTAAGGGTTAAA i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=39078.000000 s hg38.chr3_KI270779v1_alt 145162 11 + 205312 AGACAAAAGTC s panTro5.chr3 2480925 11 - 202621043 AGACAAAAGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108541 11 + 190779 AGACAAAAGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53266 11 - 55620 AGACAAAAGTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907840 11 + 123690457 AGACAAAAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484874 11 + 204787373 TGACAAACGTC i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504806 11 + 16847902 TGACAAACGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432360 11 - 91754291 TGACAAACGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610228 11 - 1977891 TGACAAACGTC i manLeu1.NW_012102020v1 C 0 C 0 s micMur3.chr1 25919865 11 - 114275543 AGACAAAAGTC i micMur3.chr1 C 0 I 186 s otoGar3.GL873829 432799 11 - 608964 GGACAAAGACT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=14070.000000 s hg38.chr3_KI270779v1_alt 145173 5 + 205312 TATgc s panTro5.chr3 2480936 5 - 202621043 CATgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108552 5 + 190779 CATgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53277 5 - 55620 CATgc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907851 5 + 123690457 CATgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484885 5 + 204787373 CATGA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504817 5 + 16847902 CATgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432371 5 - 91754291 CATGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 610239 5 - 1977891 CATGC i manLeu1.NW_012102020v1 C 0 M 895 s otoGar3.GL873829 432810 5 - 608964 GATGT i otoGar3.GL873829 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M a score=4490.000000 s hg38.chr3_KI270779v1_alt 145178 2 + 205312 tg s panTro5.chr3 2480941 2 - 202621043 tg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108557 2 + 190779 tg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53282 2 - 55620 tg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907856 2 + 123690457 cg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202484890 2 + 204787373 cg i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504822 2 + 16847902 cg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432376 2 - 91754291 cg i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 432815 2 - 608964 TG i otoGar3.GL873829 C 0 I 426 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M a score=346193.000000 s hg38.chr3_KI270779v1_alt 145180 145 + 205312 ggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggaggatcacgaggtcaggagttcgagaccagcctgaccaacatggagaagccctgtctctacttaaaatacaaaaattagccgggtgtggtggcg s panTro5.chr3 2480943 145 - 202621043 ggtgcagtggctcacgcctgtaatcccagcactttgggaggctgaggcaggaggatcacgaggtcaggagttcgagaccagcctgaccaaaatggagaagccctgtctctacttaaaatacaaaaattagccgggtgtggtggcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108559 145 + 190779 ggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggaggatcacgaggtcaggagttcgagaccagcctgaccaaaatggagaagccctgtctctacttaaaatacaaaaattagccgggtgtggtggcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53284 145 - 55620 ggtgcggtggctcacgcctgtaatcccagctctttgggaggctgaggcgggaggatcaagaggtcaggagttcgagaccagcctgaccaacatggagaagccctgtctctacttaaaatacaaaaattagccgggtgtggtggcg i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120907858 145 + 123690457 ggcgcggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggaggatcatgaggtcaggagttcgagaccagcctgaccaacatggagaagccctgtctctacttaaaatacaaaaattagccgggcgtggtggcg i nomLeu3.chr11 C 0 I 3 s rheMac8.chr2 202484892 145 + 204787373 gacgcggtggctctcgcctgtaatcccagaactttgggaggccgaggcaggtggatcatgaggttaggagttcgagaccagcctgaccaacatggagaaacctcgtctctactaaaaatacaaaaactagcctggtgtggcggcg i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504824 145 + 16847902 gacgcggtggctctcgcctgtaatcccagaactttgggaggccgaggcgggtggatcacgaggtcaggagttcgagaccagcctgaccaacatggagaaacctcgtctctactaaaaatacaaaaactagcctggtgtggtggcg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432378 145 - 91754291 gacgcggtggctctcgcctgtaatcccagaactttgggaggccgaggcgggtggatcacgaggtcaggagttcgagaccagcctgaccaacatggagaaacttcgtctctactaaaaatacaaaaattagccaggcgtggtggcg i chlSab2.chr15 C 0 I 132 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M a score=1314.000000 s hg38.chr3_KI270779v1_alt 145325 1 + 205312 c s panTro5.chr3 2481088 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108704 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53429 1 - 55620 c i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908006 1 + 123690457 t i nomLeu3.chr11 I 3 C 0 s rheMac8.chr2 202485037 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504969 1 + 16847902 c i cerAty1.NW_012004056v1 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e chlSab2.chr15 432523 132 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=282819.000000 s hg38.chr3_KI270779v1_alt 145326 129 + 205312 atgcctgtaatcccagccactcgggaggctgaggcaggagaattgcttgaacccgggaggctgaggttccagtgagctgagatcgcgccactgcactccagcctgggcaacaagagcgaaaactccatc s panTro5.chr3 2481089 129 - 202621043 atgcctgtaatcccagccactcgggaggctgaggcaggagaatcgcttgaacccgggaggctgaggttccagtgagctgagatcgtgccactgcacttcagcctgggcaacaagagcgaaaactccgtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108705 129 + 190779 atgcctgtaatcccagccactcgggaggctgaggcaggagaatcgcttgaacccgggaggctgaggttccagtgagctgagatcgtgccactgcacttcagcctgggcaacaagagcgaaaactccgtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53430 128 - 55620 atgcctgtaatcccagccactcgggaggctgaggcaggagaatcgcttgaacccaggaggctgaggttcc-gtgagctgagatcgtgccactgcacttcagcctgggcaacaagatcgaaaactccgtc i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908007 129 + 123690457 tcgcctgtaatcccagctactccggaggctgaggcaggagaattgcttgaacccaggaggcggaggttccagtgagctgagatcgcgccattgcactccagtctgggcaacaagaacggaaactccgtc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485038 128 + 204787373 atgcctgtaatcccagctactcgggaggctgaggcaggagaatctcttgaacccgggaggtggaggtttcagtgagccaagattgctccactgcactccagcctgggcgacaagagc-aaccctccgtt i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 504970 128 + 16847902 atgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccggggggtggaggttgcagtgagccaagattgctccactgcactctagcctgggcgacaagagc-aaccctccgtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432655 128 - 91754291 gcgcctgtaatctcagctactcgggaggctgaggcaggagaatctcttgaacccgggaggtggaggtttcagtgagccaagattgctccactgcactccagcctgggcgacaagagc-aaccctccgtt i chlSab2.chr15 I 132 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e mm10.chr16 65448824 13 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M a score=23180.000000 s hg38.chr3_KI270779v1_alt 145455 8 + 205312 tcaaaaaa s panTro5.chr3 2481218 8 - 202621043 tcaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 108834 8 + 190779 tcaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53558 8 - 55620 tcaaaaaa i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908136 8 + 123690457 tcaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485166 8 + 204787373 tcaaaaaa i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 505098 8 + 16847902 tcaaaaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432783 8 - 91754291 tcaaaaaa i chlSab2.chr15 C 0 C 0 s mm10.chr16 65448837 8 - 98207768 TCAAAACT i mm10.chr16 I 13 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 563408 5320 + 19675229 M e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M a score=5107.000000 s hg38.chr3_KI270779v1_alt 145463 13 + 205312 ---aaaaaaaaaaaaa s panTro5.chr3 2481226 13 - 202621043 ---aaaaaaaaaaaaa i panTro5.chr3 C 0 n 0 s panPan2.chrUn_NW_014024201v1 108842 13 + 190779 ---aaaaaaaaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53566 10 - 55620 ---aagaaaaaaa--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908144 13 + 123690457 ---aaaaaaaaaaaag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485174 8 + 204787373 -------aaaaaaaa- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 568884 12 + 19675229 ---AAAAAAAAAAAA- i macNem1.NW_012014355v1 M 5320 C 0 s cerAty1.NW_012004056v1 505106 12 + 16847902 ---aaaaaaaaaaaa- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432791 3 - 91754291 ------------aaa- i chlSab2.chr15 C 0 C 0 s mm10.chr16 65448845 13 - 98207768 ACTAAAGGGCGAA--- i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M a score=-600.000000 s hg38.chr3_KI270779v1_alt 145476 1 + 205312 t s panPan2.chrUn_NW_014024201v1 108855 1 + 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53576 1 - 55620 t i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908157 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s mm10.chr16 65448858 1 - 98207768 A i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e cebCap1.NW_016107444v1 442335 36 - 6778120 I e macNem1.NW_012014355v1 568896 0 + 19675229 C e calJac3.chr17 955436 20 - 74750902 I e saiBol1.JH378146 477488 0 + 17725628 C e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e chlSab2.chr15 432794 0 - 91754291 C e cerAty1.NW_012004056v1 505118 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485182 0 + 204787373 C e panTro5.chr3 2481239 0 - 202621043 I a score=2865.000000 s hg38.chr3_KI270779v1_alt 145477 1 + 205312 a s panPan2.chrUn_NW_014024201v1 108856 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53577 1 - 55620 a i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908158 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485182 1 + 204787373 a i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 568896 1 + 19675229 A i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 505118 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 432794 1 - 91754291 a i chlSab2.chr15 C 0 I 1 s saiBol1.JH378146 477488 1 + 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442371 1 - 6778120 A i cebCap1.NW_016107444v1 I 36 C 0 s mm10.chr16 65448859 1 - 98207768 A i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e calJac3.chr17 955436 20 - 74750902 I e colAng1.NW_012118932v1 472722 927 + 7796314 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=11176.000000 s hg38.chr3_KI270779v1_alt 145478 2 + 205312 ga s panPan2.chrUn_NW_014024201v1 108857 1 + 190779 -a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53578 2 - 55620 ga i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908159 2 + 123690457 ga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485184 2 + 204787373 ga i rheMac8.chr2 I 1 C 0 s macNem1.NW_012014355v1 568898 2 + 19675229 GA i macNem1.NW_012014355v1 I 1 C 0 s cerAty1.NW_012004056v1 505120 2 + 16847902 GA i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 432796 2 - 91754291 ga i chlSab2.chr15 I 1 C 0 s colAng1.NW_012118932v1 473649 2 + 7796314 GA i colAng1.NW_012118932v1 I 927 C 0 s saiBol1.JH378146 477489 2 + 17725628 GA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442372 2 - 6778120 GA i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65448860 2 - 98207768 GA i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e aotNan1.NW_018492867v1 19876 30 + 21398 I e calJac3.chr17 955436 20 - 74750902 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=20532.000000 s hg38.chr3_KI270779v1_alt 145480 3 + 205312 caa s panPan2.chrUn_NW_014024201v1 108858 3 + 190779 caa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53580 3 - 55620 caa i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908161 3 + 123690457 caa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485186 3 + 204787373 caa i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 568900 3 + 19675229 CAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505122 3 + 16847902 CAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432798 3 - 91754291 caa i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473651 3 + 7796314 CAA i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 477491 3 + 17725628 CAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442374 3 - 6778120 CAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19906 3 + 21398 CAA i aotNan1.NW_018492867v1 I 30 C 0 s mm10.chr16 65448862 3 - 98207768 CGA i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=386547.000000 s hg38.chr3_KI270779v1_alt 145483 63 + 205312 aaGTCCAGCGCAATGAAGATGAGTAACTGCAAAGCCCTTTTCAGGGAATGAGACTTGTTTCCT s panPan2.chrUn_NW_014024201v1 108861 63 + 190779 aaGTCCAGCGCAATGAAGATGAGTAACTGCAAAGCCCTTTTCAGGGAATGAGACTTGTTTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53583 63 - 55620 aaGTCCAGCGCAATGAAGATGAGTAACTACAAAGCCCTTTTCAGGGAATGAGACTTGTTTCCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908164 63 + 123690457 aaGTGCAGCGCAATGAAGATGAGCAACTGCAAAGCCCTTTTCAGGGAATGAGACTTGTTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485189 63 + 204787373 aaGTCCAGTGCAGTGAAGATTCGTGACTGCAGAATCCTTTTCAGGGAATGAGACTTGCTTCCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 568903 63 + 19675229 AAGTCCAGTGCAGTGAAGATTCGTGACTGCAGAGCCCTTTTCAGGGAATGAGACTTGCTTCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505125 63 + 16847902 AAGTCCAGTGCAGTGAAGATTCGTGACTGCAGAGCCCTTTTCAGGGAATGAGACTTGCTTCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432801 63 - 91754291 aaGTCCAGTGCAGTGAAGATTCGTGACTGCAGAGCCCTTTTCAGGGAATGAGACTTGCTTCCT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473654 63 + 7796314 AAGTCCAGTACAGTGAAGATTCGTGACTGCAGAGCCCTTTTCAGGGAGTGAGACTTGTTTCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955456 62 - 74750902 AAGCCCAACACAGTGAAGATGAGAAACTGCA-AGTCCTTTTCAGGAAACGAGACTTGTTTCCT i calJac3.chr17 I 20 C 0 s saiBol1.JH378146 477494 62 + 17725628 AAGCCCAACCCAGGGAAGCTGAGCAACTGCA-CATCCTTTTCAGGAAGTGACACTTGTTTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442377 62 - 6778120 AAGTCCAACGCAGTGAAGATGAGCAACTGCA-AGTCCTTTTCAGGGAGTGAGACTTGTTTCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19909 62 + 21398 AAGTCCAACGCAGTGAAGACGAGCAACTGCA-AGTCCTTTTCAGGAAATGAGACTTGTTTCCT i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65448865 62 - 98207768 AACTCCAAAACAGCAAAGACTAGTCACTTAA-AGACCTTTTCATAAAATGACACCTATTTCCT i mm10.chr16 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083619 0 + 31377067 C e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=709605.000000 s hg38.chr3_KI270779v1_alt 145546 106 + 205312 AAGACGGCCTTTCTCCAGATAAACTTGAAGA----------CTCCTCCAATTTAACCTAGGACTCCCTAGAGGCCCTCGGGCTCCAGTGTGAGAAACCTTGTCCCAAATATTTCTC s panPan2.chrUn_NW_014024201v1 108924 106 + 190779 AAGACGACCTTTCTCCAGATAAACTTGAAGA----------CCCCTCCAATTTAACCTAGGACTCCCTAGAGGCCCTCGGGCTCCAGTTTGAGAAACCTTGTCCCAAATATTTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53646 106 - 55620 AAGACGGCCTTTCTCCAGATAAACTTGAAGA----------CTCCTCCAATTTAACCTAGGACTCCCTAGAGGCCCTCGGGCTCCAGTTTGAGAAACCTTGTCCCAAATATTTCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908227 105 + 123690457 AA-CTGGCCTTTCTCCAGATAAACTTGAGGA----------CTCCTCGAATTTAACCTATAACTCCCTAGAGGTCCTCGGGCTCCAGTTTGAGAAACCTTGTCCCAAATATTTCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485252 106 + 204787373 AAGATGGCCtttctccggttaaacttgaaga----------ctcctcgaatttaacctaggactccctagaggttcttgggctccggtttgagaaaccttgTCCCAAATAATTCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 568966 106 + 19675229 AAGATGGCCTTTCTCCGGTTAAACGTGAAGA----------CTCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTCCGGTTTGAGAAACCTGGTCCCAAATATTTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505188 106 + 16847902 AAGATGGCCTTTCTCCGGTTACACTTGAAGA----------CTCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTCCGGTTTGAGAAACCTTGTCCCAAATAATTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432864 106 - 91754291 AAGACGGCCTTTCTCCGGTTAAACTTGAAGA----------CTCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTCGGGTTTGAGAAACCTTGTCCCAAATATTTCTC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473717 106 + 7796314 AAGATGGCCTTTCTCCGGTTAAACCTGAAGA----------TTCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTGCGGTTTGAGAAACCTTGTCCCTAATATTTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955518 105 - 74750902 AAGATGGCATTTCTCCAGAGAAACTTAAAGA-----------CCCTCGAATTTAGCCTAGGCCGCCCTAGAGGTCCTTAGGCTCCAGTTTGAGAAACCCTGTCCCAAACAATTCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477556 106 + 17725628 AAGATGGCATTTCTCCAGAGAAACTTGAAGA----------CCCCTCCAATTTAGCCTAGACCGCCCTAGAGGCCCTTAGGCTCCCGTTTGAGAAACCTTGTCCCAAACGATTCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442439 106 - 6778120 AGGATGGCATTTCTCCAGAGAAACTCGAAGA----------CCCCTCGAATTTAGCCGAGGCCGCCCTAGAGGTCCTTAGGCTCCAGTCTGAGAAACCTTGTCCGGAACAGTTCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 19971 106 + 21398 AGGGTGGCATTTCTCCAGAGACACTTGAAGA----------CCCCTCGAGTTGAGCCTAGGCCGCCCTGGAGGTCCTCAGGCTGCAGCGTGAGAAACCTCGGCCCAGACAATTCTC i aotNan1.NW_018492867v1 C 0 C 0 s mm10.chr16 65448927 116 - 98207768 ACAGCGGTACTTCTTCAGATAAACTTGAAGACACTCCCACCCACCCCGGAATTGCCCAAGGCCACCCTGTATGTCCTCAGATTCCAGTTTGGGAAACTATGTCTTAAGTGTTTCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29083619 116 + 31377067 AAGTCGGTATTTGTCCAGATACACGGGTAGATACCCCTCCCCCGCCCGAATTTGTCCTTGGACCCCTCAGATGTCCTTGGGTTCTAGCTTGAGAAAGCTTGTCTTAAATATTTCTC i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e micMur3.chr1 25919876 186 - 114275543 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=40640.000000 s hg38.chr3_KI270779v1_alt 145652 7 + 205312 GCAGCTG-- s panPan2.chrUn_NW_014024201v1 109030 7 + 190779 GCAGCTG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53752 7 - 55620 GCAGCTG-- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908332 7 + 123690457 CCAGCTG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485358 7 + 204787373 GCAGCTG-- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569072 7 + 19675229 GCAGCTG-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505294 7 + 16847902 GCAGCTG-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432970 7 - 91754291 GCAGCTG-- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473823 7 + 7796314 GCAGCTG-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955623 7 - 74750902 ACAGCTG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477662 7 + 17725628 ACAGCTG-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442545 7 - 6778120 GCAACTG-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20077 7 + 21398 ACGGCTG-- i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25920062 7 - 114275543 GCAGCCA-- i micMur3.chr1 I 186 C 0 s mm10.chr16 65449043 5 - 98207768 --ACATG-- i mm10.chr16 C 0 I 3 s canFam3.chr33 29083735 7 + 31377067 --AAACGAG i canFam3.chr33 C 0 C 0 e proCoq1.NW_012133858v1 7434223 252 + 22200726 I e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=309151.000000 s hg38.chr3_KI270779v1_alt 145659 37 + 205312 --------CCGACTCCTTGGCGCCCTCCCCTGGTCCTGCTTGGAA s panPan2.chrUn_NW_014024201v1 109037 37 + 190779 --------CCGACTCCTTGGCGCCCTTCCCTGGTCCTGCTTGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53759 37 - 55620 --------CCGACTCCTTGGCGCCCTCCCCTGGTCCTGCTTGGAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908339 37 + 123690457 --------CCGACTCCTTGGCACCCTCCCCTGGTCCTGCTTGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485365 37 + 204787373 --------CCGACTCCTTGGGGCCCTCCCCTGGTCCTGCTTGGAA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569079 37 + 19675229 --------CCGACTCCTTGGGGCTCTCCCCTGGTCCTGCTTGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505301 37 + 16847902 --------CCGACTCCTTGGGGCCCTCCCCTGGTCCTGCTTGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 432977 37 - 91754291 --------CCGACTCCTTGGGGCCCTCCCCTGGTCCTGCTTGGAA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473830 36 + 7796314 --------CCGACTCCTTGGGGCCCT-CCCGGGTCCTGCTTGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955630 37 - 74750902 --------CTGACTCCTTGGCGCCCTCCCCTGGTCCTGCCTGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477669 37 + 17725628 --------CTGACTCCTTGGGGCCCTCCCCTGGTCCTGCTTGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442552 36 - 6778120 --------CTGAGTCCTTGGCGCCCTCCCCT-GTCCTGCTTGGAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20084 36 + 21398 --------CCGACTCCTTGGCGCCCT-CCCTGGTCCTGCTTGGAA i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25920069 37 - 114275543 --------CCGGCTCCTTGGCGCCCTCACCTGGTCTTGCTTGGAA i micMur3.chr1 C 0 I 90 s proCoq1.NW_012133858v1 7434475 37 + 22200726 --------CCGGCTCCTTGGCGCCCTCACCTGGTCTTTCTTGGAA i proCoq1.NW_012133858v1 I 252 N 0 s mm10.chr16 65449051 35 - 98207768 --------CTAACTCTATATATACT--ACATGGCCTTGATTGGCT i mm10.chr16 I 3 C 0 s canFam3.chr33 29083742 43 + 31377067 TCTCCCCCTTTCGTTCTTGGCAGCCCTCCCTGTT--GGCCTGGAT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 432817 426 - 608964 I e dasNov3.JH569502 3910611 1352 + 6579706 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=150959.000000 s hg38.chr3_KI270779v1_alt 145696 22 + 205312 ---------ACCCGCA-GGCTCTCCTGGCCTC s panPan2.chrUn_NW_014024201v1 109074 22 + 190779 ---------ACCCACA-GGCTCTCCTGGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53796 22 - 55620 ---------ACCCGCA-GGCTCTCCTGGCCTC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908376 22 + 123690457 ---------TCCTGCA-GGCTCTCCTGGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485402 22 + 204787373 ---------TCCTGTA-GGCTCTCCTGGCCTC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569116 22 + 19675229 ---------TCCCGTA-GGCTCTCCTGGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505338 22 + 16847902 ---------TCCCGTA-GGCTCTCCTGGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433014 22 - 91754291 ---------TCCCGTA-GGCTCTCCTGGCCTG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473866 22 + 7796314 ---------TCCCGTA-GGCTCTCCTGGCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955667 22 - 74750902 ---------TCCCGCA-GGCTTTCCTGGCCTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477706 22 + 17725628 ---------TCCGGCA-GGCTTTCCTGGCCTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442588 22 - 6778120 ---------TCCCGCA-GGCTTTCCTGGCCTC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20120 22 + 21398 ---------TCCCGCA-GGCTTCCCTGGCCTC i aotNan1.NW_018492867v1 C 0 I 34 s otoGar3.GL873829 433243 22 - 608964 ---------ACTCTAA-GGCCCTTCTGGCCTT i otoGar3.GL873829 I 426 C 0 s mm10.chr16 65449086 20 - 98207768 -----------TAGCA-CAGTCTCTTGGCTTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29083785 31 + 31377067 ACCACCGCATCTCATAGGGCCCACTCGGCCT- i canFam3.chr33 C 0 C 0 e micMur3.chr1 25920106 90 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=49234.000000 s hg38.chr3_KI270779v1_alt 145718 20 + 205312 CTCACT------------G----CCTGCAAATCGGA--- s panPan2.chrUn_NW_014024201v1 109096 20 + 190779 CTCACT------------G----CCTGCAAATCGGA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53818 20 - 55620 CTCACT------------G----CCTGCAAATCGGA--- i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908398 20 + 123690457 CTCACT------------G----CCTGCAAATCTCA--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485424 20 + 204787373 GTCGCT------------G----CCTGCACATCTGG--- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569138 20 + 19675229 GTCACT------------G----CCTGCACATCTGG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505360 20 + 16847902 GTCGCT------------G----CCTGCACATCTGG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433036 20 - 91754291 GTCGCT------------G----CCTGCACATCTGG--- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 473888 20 + 7796314 GGCGCT------------G----CCTGCACATCTGG--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955689 18 - 74750902 CTCA--------------C----CCTGCAAATCTGA--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477728 20 + 17725628 CTCACT------------C----CCCGTCAATCTGA--- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442610 15 - 6778120 T-----------------C----CCTGCAAATCTGA--- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433265 24 - 608964 CTCACT------------GGGGCCCTGAAAATTCAC--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65449106 32 - 98207768 CTCACTGATGCCTCCCTCG----ATTGACCATCCAG--- i mm10.chr16 C 0 I 6 s canFam3.chr33 29083816 16 + 31377067 -----------------------CCTGGAAATTCACCCA i canFam3.chr33 C 0 C 0 e micMur3.chr1 25920106 90 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e aotNan1.NW_018492867v1 20142 34 + 21398 I e manLeu1.NW_012102020v1 610244 895 - 1977891 M e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=53198.000000 s hg38.chr3_KI270779v1_alt 145738 9 + 205312 CCGCTCCAG s panPan2.chrUn_NW_014024201v1 109116 9 + 190779 CCGCTCCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53838 9 - 55620 CCGCTCCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908418 9 + 123690457 CCACTCCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485444 9 + 204787373 TCGCTGCAG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569158 9 + 19675229 CCGCTGCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505380 9 + 16847902 CCGCTGCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433056 9 - 91754291 CCACTGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611148 9 - 1977891 CCGCTGCAG i manLeu1.NW_012102020v1 M 895 C 0 s colAng1.NW_012118932v1 473908 9 + 7796314 CCGCTGCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955707 9 - 74750902 CCACTCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477748 9 + 17725628 CCAGTCCAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442625 9 - 6778120 CCGCTGCAG i cebCap1.NW_016107444v1 C 0 I 7 s otoGar3.GL873829 433289 6 - 608964 CCACTC--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65449144 9 - 98207768 CCATACCAG i mm10.chr16 I 6 C 0 s canFam3.chr33 29083832 9 + 31377067 ACACCCCAC i canFam3.chr33 C 0 C 0 e micMur3.chr1 25920106 90 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e aotNan1.NW_018492867v1 20142 34 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=39912.000000 s hg38.chr3_KI270779v1_alt 145747 14 + 205312 GCACCACTTGTTAA s panPan2.chrUn_NW_014024201v1 109125 14 + 190779 GCACCACTTGTTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53847 14 - 55620 GCGCCACTTGTTAA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908427 14 + 123690457 GCACCACTTGTTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485453 14 + 204787373 GCACCACTTGTTAA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569167 14 + 19675229 GCACCACTTGTTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505389 14 + 16847902 GCACCACTTGTTAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433065 14 - 91754291 GCACCACTTGTTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611157 14 - 1977891 GCACCACTTGTTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 473917 14 + 7796314 GCACCACTTGTTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955716 7 - 74750902 ---CCACAGG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477757 6 + 17725628 ---CCAC-GG---- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 433295 2 - 608964 ------------AA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65449153 8 - 98207768 CCACCACT------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29083841 7 + 31377067 CCACCAC------- i canFam3.chr33 C 0 C 0 e micMur3.chr1 25920106 90 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e aotNan1.NW_018492867v1 20142 34 + 21398 I e cebCap1.NW_016107444v1 442634 7 - 6778120 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=3455.000000 s hg38.chr3_KI270779v1_alt 145761 1 + 205312 A s panPan2.chrUn_NW_014024201v1 109139 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53861 1 - 55620 A i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908441 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485467 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569181 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505403 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433079 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611171 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 473931 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955723 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477763 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442641 1 - 6778120 G i cebCap1.NW_016107444v1 I 7 C 0 s otoGar3.GL873829 433297 1 - 608964 G i otoGar3.GL873829 C 0 C 0 e micMur3.chr1 25920106 90 - 114275543 I e mm10.chr16 65449161 0 - 98207768 C e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29083848 0 + 31377067 C e aotNan1.NW_018492867v1 20142 34 + 21398 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=153988.000000 s hg38.chr3_KI270779v1_alt 145762 19 + 205312 TGCCATTTGTACAATGCAA s panPan2.chrUn_NW_014024201v1 109140 19 + 190779 TGCCATTTGTACAATGCAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53862 19 - 55620 TGCCATTTGTACAATGCGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908442 19 + 123690457 TGCCATTTGTACAATGCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485468 19 + 204787373 TGCCATTTGTACAATGCAA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569182 19 + 19675229 TGCCATTTGTACAATGCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505404 19 + 16847902 TGCCATTTGTACAATGCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433080 19 - 91754291 TGCCATTTGTACAATGCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611172 19 - 1977891 TGCCATTTGTACAATGCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 473932 19 + 7796314 TGCCATTTGTACAATGCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955724 19 - 74750902 TGCCATTTGTAAAATGCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477764 19 + 17725628 TGCGGTTTGTAAAATGCAA i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 442642 19 - 6778120 TGCCATTTGTCAAATGCAA i cebCap1.NW_016107444v1 C 0 I 3 s aotNan1.NW_018492867v1 20176 19 + 21398 TGCCATTTGTAAAATGCAA i aotNan1.NW_018492867v1 I 34 I 3 s otoGar3.GL873829 433298 17 - 608964 TGCCATC--TAAAATGCAA i otoGar3.GL873829 C 0 I 4 s mm10.chr16 65449161 6 - 98207768 -------------GTGCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29083848 12 + 31377067 -------GGCACCATCCAA i canFam3.chr33 C 0 C 0 e micMur3.chr1 25920106 90 - 114275543 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=255351.000000 s hg38.chr3_KI270779v1_alt 145781 31 + 205312 AACTGAGTCCTCCCTGGCTCCCGTTGCCTAC s panPan2.chrUn_NW_014024201v1 109159 31 + 190779 AACTGAGTCCTCCCTGGCTCCCGTTGCCTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53881 31 - 55620 AACTGAGTCCTCTCTGGCTCCCGTTGCCTAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908461 31 + 123690457 CACTGAGTCCTCCCAGGCTCCCCTTACCTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485487 29 + 204787373 AAC--AGTCCTCCCTGGCTCTCCTTACCTAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569201 29 + 19675229 AAC--AGTCCTCCCTGGCTCTCCTTACCTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505423 29 + 16847902 AAC--AGTCCTCCCTGGCTCTCCTTACCTAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433099 29 - 91754291 AAC--AGTCCTCCCTGGCTCTCCTTACCTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611191 29 - 1977891 AAC--AGTCCTCCCTGGCTCTCCTTACCTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 473951 29 + 7796314 AAC--AGTCCTCCCTGGCTCTCCTTACCTAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955743 27 - 74750902 ----GAGTCCTCCCTGGCGCTCCTTACCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477787 31 + 17725628 AACCGAATCCTCCCTGGCTCTCCTGACCCAC i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 442664 31 - 6778120 AACTGAGTCCTCCCTGGCTGTCCTTACCTAC i cebCap1.NW_016107444v1 I 3 C 0 s aotNan1.NW_018492867v1 20198 31 + 21398 AACTGAGTCCTCCCTGGCTCTCCTCACCTAC i aotNan1.NW_018492867v1 I 3 C 0 s micMur3.chr1 25920196 31 - 114275543 AACTGTGTCCTCCCTGGTTCCCCTTACCTAC i micMur3.chr1 I 90 C 0 s otoGar3.GL873829 433319 31 - 608964 AACAGTGTCCTCCCTGGTTCCACTCACCTAC i otoGar3.GL873829 I 4 C 0 s mm10.chr16 65449167 30 - 98207768 ATCTGTATCCTCCCTGATTC-CCTTACCCAC i mm10.chr16 C 0 I 1915 s canFam3.chr33 29083860 23 + 31377067 -GTATAAACCTGGCCGGGTC-------CTAC i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=25730.000000 s hg38.chr3_KI270779v1_alt 145812 10 + 205312 -----AGGATTCCCC s panPan2.chrUn_NW_014024201v1 109190 10 + 190779 -----AGGATTCCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53912 10 - 55620 -----AGGATTCCCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908492 10 + 123690457 -----AGGGTGCCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485516 6 + 204787373 -----AGGATT---- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569230 6 + 19675229 -----AGGATT---- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505452 6 + 16847902 -----AGGATT---- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433128 6 - 91754291 -----AGGATT---- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611220 6 - 1977891 -----AGGATT---- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 473980 6 + 7796314 -----AGGATT---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955770 9 - 74750902 -----AGGATT-CCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477818 9 + 17725628 -----AGGATT-CCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442695 9 - 6778120 -----AGGACT-CCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20229 9 + 21398 -----GGGATT-CCC i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25920227 10 - 114275543 -----AGGATTCCCC i micMur3.chr1 C 0 I 18 s otoGar3.GL873829 433350 10 - 608964 -----AGGATTCCCC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29083883 11 + 31377067 CTGATTGTATC---- i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=173538.000000 s hg38.chr3_KI270779v1_alt 145822 26 + 205312 GCATGCCGGCCGCACTTTTTGCTACC s panPan2.chrUn_NW_014024201v1 109200 26 + 190779 GCATGCCGGCCGCACTTTTTGCTCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53922 26 - 55620 GCATGCCGGCCGCACTTTTGGCTACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908502 26 + 123690457 GCATGCCGGCCGCACTTTTTGCTACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485522 26 + 204787373 GCATGCTGGCCGCACTTTTTGCTCCT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569236 26 + 19675229 GCATGCTGGCCGCACTTTTTGCTCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505458 26 + 16847902 GCATGCTGGCCGCACTTTTTGCTCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433134 26 - 91754291 GCATGCTGGCCGCACTTTTTGCTCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611226 26 - 1977891 GCATGCTGGCCGCACTTTTTGCTCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 473986 26 + 7796314 GCATGCTGGCCACACTTTTTGCTCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955779 24 - 74750902 GCATGCCAGCCGCAC--TTTGCTCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477827 24 + 17725628 GCATGCCAGCCGCAC--TTGGCTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442704 24 - 6778120 GCATGCCAGCCGCAC--TTGGCTCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20238 24 + 21398 GCGTGCCAGCCGCAC--TTTGCCCCT i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 433361 26 - 608964 GCGTGTCAACTGTGCTTCTCACCACT i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29083894 25 + 31377067 ACATGACGGCCTCATTCTCAACATT- i canFam3.chr33 C 0 C 0 e micMur3.chr1 25920237 18 - 114275543 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=334270.000000 s hg38.chr3_KI270779v1_alt 145848 37 + 205312 CTTCTTCTCATTTTCAGCCACCCCAAATGCTTCGGGG s panPan2.chrUn_NW_014024201v1 109226 37 + 190779 CTTCTTCTCATTTTCAGCCACCCCAAATGCTTCGGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53948 37 - 55620 CTTCTTCTCATTTTCAGCCACCCCAAATGCTTCGGGG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908528 37 + 123690457 CTTCTTTTCATTTCGAGCCACCCCAAATGCTTCGGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485548 37 + 204787373 CTTGTTCTCATTTTCAGCCACCCCAAATGATTCGGGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569262 37 + 19675229 CTTGTTCTCATTTTCAGCCACCCCAAATGATTTGGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505484 37 + 16847902 CTTGTTCTCATTTTCAGCCACCCCAAATGATTTGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433160 37 - 91754291 CTTGTTCTCATTTTCAGCCACCCCAAATGATTCGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611252 37 - 1977891 CTTGTTCTCATTTTCAGCCACCCCAAATGATTCGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474012 37 + 7796314 CTTCTTCTCATTTTCAGCCACCCCAAATGATTCGGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955803 37 - 74750902 CTTCTTCTCATTTTCAGCAACCCCAAATGCTTTGGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477851 36 + 17725628 CTTCTTCTCATCTTCAGCAACCCCAAAGGC-TCGGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442728 37 - 6778120 CTTCTTCTCATTTTCAGCAACCCCAAATGCTTTGGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20262 34 + 21398 CTTCTTCTCATTTT---CAACCCCAAACGCTTCGGGG i aotNan1.NW_018492867v1 C 0 C 0 s micMur3.chr1 25920255 37 - 114275543 CTTCTCCTTACTTTCAGCCACCCCAAATGCTTTGGGG i micMur3.chr1 I 18 N 0 s otoGar3.GL873829 433387 33 - 608964 ---CCTCTTCCTTTCAGCCACCCCAGATGCTTGGGG- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29083919 36 + 31377067 CTTCACCTGGTTTCCA-CACCCCCAAGTGTCTTGGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=165958.000000 s hg38.chr3_KI270779v1_alt 145885 20 + 205312 ATCCACTCCCCATGCAGCAC s panPan2.chrUn_NW_014024201v1 109263 20 + 190779 ATCCGCTCCCCATGCAGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 53985 20 - 55620 ATCCGCTCCCCATGCAGCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908565 20 + 123690457 ATCTGCTCCCCATGCAGCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485585 20 + 204787373 ATCCACTCCCCATGCAGCAC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569299 20 + 19675229 ATCCGCTCCCCATGCAGCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505521 20 + 16847902 ATCCACTCCCCATGCAGCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433197 20 - 91754291 ATCCACTCCCCATGCAGCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611289 20 - 1977891 ATCCACTCCCCATGCAGCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474049 20 + 7796314 ATCCGCTCCCCACGCAGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955840 20 - 74750902 CTCCCCTCCCCATGCAGGAC i calJac3.chr17 C 0 I 3 s saiBol1.JH378146 477887 20 + 17725628 CTCCCCTCCCCATGCAGGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442765 20 - 6778120 TTCCCCTCCCCATGCAGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20296 20 + 21398 CTCCCCTCTGCATGCAGGAC i aotNan1.NW_018492867v1 C 0 C 0 s otoGar3.GL873829 433420 20 - 608964 CTCTCCTCTCCAAGTGGCAC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29083955 20 + 31377067 GTCTCCTCCCCATGCAATAC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=11683.000000 s hg38.chr3_KI270779v1_alt 145905 2 + 205312 CG s panPan2.chrUn_NW_014024201v1 109283 2 + 190779 CG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54005 2 - 55620 CG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908585 2 + 123690457 CG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485605 2 + 204787373 CG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569319 2 + 19675229 CG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505541 2 + 16847902 CC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433217 2 - 91754291 CG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611309 2 - 1977891 CG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474069 2 + 7796314 CG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 477907 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442785 2 - 6778120 CG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018492867v1 20316 2 + 21398 CG i aotNan1.NW_018492867v1 C 0 N 0 s otoGar3.GL873829 433440 2 - 608964 TG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29083975 2 + 31377067 TG i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e calJac3.chr17 955860 3 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=13623.000000 s hg38.chr3_KI270779v1_alt 145907 3 + 205312 GGA s panPan2.chrUn_NW_014024201v1 109285 3 + 190779 GGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54007 3 - 55620 GGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908587 3 + 123690457 AGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485607 3 + 204787373 GGT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569321 3 + 19675229 GGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505543 3 + 16847902 GGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433219 3 - 91754291 GGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611311 3 - 1977891 GGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474071 3 + 7796314 GGT i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 477909 3 + 17725628 GGA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 442787 3 - 6778120 GGA i cebCap1.NW_016107444v1 C 0 I 13 s otoGar3.GL873829 433442 3 - 608964 GGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29083977 3 + 31377067 GGA i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e calJac3.chr17 955860 3 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=19032.000000 s hg38.chr3_KI270779v1_alt 145910 5 + 205312 CGACT s panPan2.chrUn_NW_014024201v1 109288 5 + 190779 CGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54010 5 - 55620 CGACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908590 5 + 123690457 CGATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485610 5 + 204787373 CCACT i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569324 5 + 19675229 CCACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505546 5 + 16847902 CCACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433222 5 - 91754291 CCACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611314 5 - 1977891 CCACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474074 5 + 7796314 CGACT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 433445 5 - 608964 CTACT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29083980 5 + 31377067 CTCCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=5096.000000 s hg38.chr3_KI270779v1_alt 145915 2 + 205312 TT s panPan2.chrUn_NW_014024201v1 109293 2 + 190779 TT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54015 2 - 55620 TT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908595 2 + 123690457 TT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485615 2 + 204787373 TT i rheMac8.chr2 C 0 C 0 s colAng1.NW_012118932v1 474079 2 + 7796314 TT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 433450 2 - 608964 TT i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29083985 2 + 31377067 TT i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=1314.000000 s hg38.chr3_KI270779v1_alt 145917 1 + 205312 C s panPan2.chrUn_NW_014024201v1 109295 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54017 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908597 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485617 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s colAng1.NW_012118932v1 474081 1 + 7796314 C i colAng1.NW_012118932v1 C 0 I 5 s canFam3.chr33 29083987 1 + 31377067 T i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=1267.000000 s hg38.chr3_KI270779v1_alt 145918 5 + 205312 --TGCAG s panPan2.chrUn_NW_014024201v1 109296 5 + 190779 --TGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54018 5 - 55620 --TGCAG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908598 5 + 123690457 --TGCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485618 5 + 204787373 --CACGG i rheMac8.chr2 C 0 C 0 s canFam3.chr33 29083988 5 + 31377067 CATGT-- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e panTro5.chr3 2481239 0 - 202621043 I a score=13207.000000 s hg38.chr3_KI270779v1_alt 145923 8 + 205312 CCATACCT s panTro5.chr3 200142116 8 + 202621043 CCATACCT i panTro5.chr3 I 6295 C 0 s panPan2.chrUn_NW_014024201v1 109301 8 + 190779 CCATACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54023 8 - 55620 CCATACCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908603 8 + 123690457 CCATACTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485623 8 + 204787373 CCATACCT i rheMac8.chr2 C 0 C 0 s canFam3.chr33 29083993 8 + 31377067 CTACACTT i canFam3.chr33 C 0 I 17 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M a score=9138.000000 s hg38.chr3_KI270779v1_alt 145931 8 + 205312 ACCACACT s panTro5.chr3 200142124 8 + 202621043 TCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109309 8 + 190779 ACCACACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54031 8 - 55620 ACCACACT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908611 8 + 123690457 ACCACACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485631 8 + 204787373 TCCACACT i rheMac8.chr2 C 0 I 30 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M a score=1476.000000 s hg38.chr3_KI270779v1_alt 145939 2 + 205312 CG s panTro5.chr3 200142132 2 + 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109317 2 + 190779 CG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54039 2 - 55620 CG i gorGor5.CYUI01001831v1 C 0 T 18 s nomLeu3.chr11 120908619 2 + 123690457 CG i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=12774.000000 s hg38.chr3_KI270779v1_alt 145941 27 + 205312 TACCTTCCACACCCATACCTTCCACAC s panTro5.chr3 200142134 27 + 202621043 TACCTTCCACACCCTTACCTTCCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109319 27 + 190779 TACCTTCCACACCCATACCTTCCACGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120908621 27 + 123690457 TACCTTCCACGGCCATACCTTCCACAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e gorGor5.CYUI01001831v1 54041 18 - 55620 T a score=21543.000000 s hg38.chr3_KI270779v1_alt 145968 30 + 205312 CCATACCTTCCACAGTCATACCTTCCACAC s panTro5.chr3 200142161 30 + 202621043 CCATACCTTCCACGGCCATACCTTCCACAC i panTro5.chr3 C 0 T 75 s panPan2.chrUn_NW_014024201v1 109346 30 + 190779 CCATATCTTCCACGGCCATACCTTCCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54023 30 - 55620 CCATACCTACCACACTCGTACCTTCCACGG i gorGor5.CYUI01001831v1 T 18 C 0 s nomLeu3.chr11 120908648 30 + 123690457 CCATACCTTCCACGGCCATACCTTCCACAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=12982.000000 s hg38.chr3_KI270779v1_alt 145998 15 + 205312 CCATACCTTCCACAC s panTro5.chr3 200142116 15 + 202621043 CCATACCTTCCACAC i panTro5.chr3 T 75 C 0 s panPan2.chrUn_NW_014024201v1 109376 15 + 190779 CCATACCTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01001831v1 54053 15 - 55620 CCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908678 15 + 123690457 CCATACCTTCCACGG i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=11269.000000 s hg38.chr3_KI270779v1_alt 146013 16 + 205312 CCATACCTTCCACAGT s panTro5.chr3 200142131 16 + 202621043 CCATACCTTCCACACC i panTro5.chr3 C 0 T 30 s panPan2.chrUn_NW_014024201v1 109301 16 + 190779 CCATACCTACCACACT i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01001831v1 54068 16 - 55620 CCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908693 16 + 123690457 CCATACCTTCCACGGA i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=22954.000000 s hg38.chr3_KI270779v1_alt 146029 26 + 205312 CATACCTTCCACACCCATACCTTCCA s panTro5.chr3 200142117 26 + 202621043 CATACCTTCCACACCCATACCTTCCA i panTro5.chr3 T 30 C 0 s panPan2.chrUn_NW_014024201v1 109317 26 + 190779 CGTACCTTCCACACCCATACCTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54084 26 - 55620 CATACCTTCCACACCCATACCTTCCA i gorGor5.CYUI01001831v1 C 0 T 90 s nomLeu3.chr11 120908709 26 + 123690457 CATACCTTCCACGGCCATACCTTCCA i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=23201.000000 s hg38.chr3_KI270779v1_alt 146055 33 + 205312 CAGTCATACCTTCCACACCCATACCTTCCACGG s panTro5.chr3 200142143 33 + 202621043 CACCCTTACCTTCCACACCCATACCTTCCACGG i panTro5.chr3 C 0 T 60 s panPan2.chrUn_NW_014024201v1 109343 33 + 190779 CGGCCATATCTTCCACGGCCATACCTTCCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54020 33 - 55620 CAGCCATACCTACCACACTCGTACCTTCCACGG i gorGor5.CYUI01001831v1 T 90 C 0 s nomLeu3.chr11 120908735 33 + 123690457 CACCCATACCTTCCACGGCCATACCTTCCACGG i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=11080.000000 s hg38.chr3_KI270779v1_alt 146088 13 + 205312 CCATACCTTCCAC s panTro5.chr3 200142116 13 + 202621043 CCATACCTTCCAC i panTro5.chr3 T 60 C 0 s panPan2.chrUn_NW_014024201v1 109376 13 + 190779 CCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54053 13 - 55620 CCATACCTTCCAC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908768 13 + 123690457 ACATACCTTTCAC i nomLeu3.chr11 C 0 I 1 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=24189.000000 s hg38.chr3_KI270779v1_alt 146101 45 + 205312 ACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCAC s panTro5.chr3 200142129 45 + 202621043 ACCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109389 45 + 190779 ACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 T 59 s gorGor5.CYUI01001831v1 54066 45 - 55620 ACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=3985.000000 s hg38.chr3_KI270779v1_alt 146146 31 + 205312 GCCCATACCTTCCACACCCATACCTTCCACA-- s panTro5.chr3 200142174 31 + 202621043 GGCCATACCTTCCACACCCATACCTTCCACA-- i panTro5.chr3 C 0 I 60 s gorGor5.CYUI01001831v1 54111 18 - 55620 ---------------ACCCATACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109434 59 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=15668.000000 s hg38.chr3_KI270779v1_alt 146177 32 + 205312 GTCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142265 32 + 202621043 CCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 I 60 T 181 s panPan2.chrUn_NW_014024201v1 109375 32 + 190779 GCCATACCTTCCACACCCTTACCTTCCACACC i panPan2.chrUn_NW_014024201v1 T 59 C 0 s gorGor5.CYUI01001831v1 54129 30 - 55620 --CATACCTTCCACACCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=5790.000000 s hg38.chr3_KI270779v1_alt 146209 23 + 205312 CATACCTTTCACACCCATACCTT s panPan2.chrUn_NW_014024201v1 109407 23 + 190779 CATACCTTCCACACTCATACCTT i panPan2.chrUn_NW_014024201v1 C 0 T 120 s gorGor5.CYUI01001831v1 54159 23 - 55620 CATACCTTCCACATCCATACCTT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 181 + 202621043 T a score=-31.000000 s hg38.chr3_KI270779v1_alt 146232 1 + 205312 T s gorGor5.CYUI01001831v1 54182 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109430 120 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 181 + 202621043 T a score=264.000000 s hg38.chr3_KI270779v1_alt 146233 6 + 205312 ---CCACAC s panPan2.chrUn_NW_014024201v1 109310 6 + 190779 ---CCACAC i panPan2.chrUn_NW_014024201v1 T 120 C 0 s gorGor5.CYUI01001831v1 54183 7 - 55620 CCACCAC-- i gorGor5.CYUI01001831v1 C 0 I 1 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 181 + 202621043 T a score=13593.000000 s hg38.chr3_KI270779v1_alt 146239 25 + 205312 CCATACCTTCCACACCCATACCTTC s panTro5.chr3 200142116 25 + 202621043 CCATACCTTCCACACCCATACCTTC i panTro5.chr3 T 181 C 0 s panPan2.chrUn_NW_014024201v1 109316 25 + 190779 TCGTACCTTCCACACCCATACCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54191 25 - 55620 CCATACCTTCCACACCCATACCTTC i gorGor5.CYUI01001831v1 I 1 I 72 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=7995.000000 s hg38.chr3_KI270779v1_alt 146264 19 + 205312 CACGCCCATACCTTCCACG s panTro5.chr3 200142141 19 + 202621043 CACACCCTTACCTTCCACA i panTro5.chr3 C 0 I 45 s panPan2.chrUn_NW_014024201v1 109341 19 + 190779 CACGGCCATATCTTCCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54288 19 - 55620 CACATCCATACCTTCCACA i gorGor5.CYUI01001831v1 I 72 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=12410.000000 s hg38.chr3_KI270779v1_alt 146283 27 + 205312 CCCATACCTTCCACAGTCATACCTTCC s panTro5.chr3 200142205 27 + 202621043 CCCATACCTTCCACACTCATACCTTCC i panTro5.chr3 I 45 C 0 s panPan2.chrUn_NW_014024201v1 109360 27 + 190779 GCCATACCTTCCAAGGCCATACCTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54307 27 - 55620 TCCATACCTTCCACAGCCATACCTTCC i gorGor5.CYUI01001831v1 C 0 T 118 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=23408.000000 s hg38.chr3_KI270779v1_alt 146310 50 + 205312 ACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142232 50 + 202621043 ACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109387 50 + 190779 ACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01001831v1 54216 49 - 55620 ACAC-CATACCTTCCACACCCATACCTTCCACATCCATACCTTCCACATC i gorGor5.CYUI01001831v1 T 118 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=4311.000000 s hg38.chr3_KI270779v1_alt 146360 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142282 15 + 202621043 CATACCTTCCACACC i panTro5.chr3 C 0 T 77 s gorGor5.CYUI01001831v1 54265 15 - 55620 CATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 90 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=1157.000000 s hg38.chr3_KI270779v1_alt 146375 5 + 205312 CATAC s panPan2.chrUn_NW_014024201v1 109347 5 + 190779 CATAT i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01001831v1 54280 5 - 55620 CATAC i gorGor5.CYUI01001831v1 C 0 I 119 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 77 + 202621043 T a score=2048.000000 s hg38.chr3_KI270779v1_alt 146380 8 + 205312 CTTCCACA s panPan2.chrUn_NW_014024201v1 109352 8 + 190779 CTTCCACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54404 8 - 55620 CTTCCACA i gorGor5.CYUI01001831v1 I 119 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 77 + 202621043 T a score=12577.000000 s hg38.chr3_KI270779v1_alt 146388 31 + 205312 GTCATACCTTCCACAGTCATACCTTCCACAT s panTro5.chr3 200142220 31 + 202621043 CTCATACCTTCCACACTCATACCTTCCACAC i panTro5.chr3 T 77 C 0 s panPan2.chrUn_NW_014024201v1 109360 31 + 190779 GCCATACCTTCCAAGGCCATACCTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01001831v1 54412 31 - 55620 TCCATACCTTCCACATCCATACATTCCACAT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=21380.000000 s hg38.chr3_KI270779v1_alt 146419 43 + 205312 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCAC s panTro5.chr3 200142251 43 + 202621043 TCATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCAC i panTro5.chr3 C 0 T 178 s panPan2.chrUn_NW_014024201v1 109301 43 + 190779 CCATACCTACCACACTCGTACCTTCCACACCCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01001831v1 54443 43 - 55620 CCATACCTTCCACACCCATACCTTCCACACCCATACTTTCCAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=3012.000000 s hg38.chr3_KI270779v1_alt 146462 17 + 205312 GCCCATACCTTCCACGC s panPan2.chrUn_NW_014024201v1 109344 17 + 190779 GGCCATATCTTCCACGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54486 17 - 55620 ATCCATACCTTCCACAT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142294 178 + 202621043 T a score=27687.000000 s hg38.chr3_KI270779v1_alt 146479 60 + 205312 CCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGG s panTro5.chr3 200142116 60 + 202621043 CCATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGG i panTro5.chr3 T 178 T 60 s panPan2.chrUn_NW_014024201v1 109361 60 + 190779 CCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54503 59 - 55620 CCATACCTTCCACACCCGTACCTTCCACATCCATACCTTCCACACCCGTACCTTCCACA- i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=7863.000000 s hg38.chr3_KI270779v1_alt 146539 15 + 205312 CCATACCTTCCACAC s panTro5.chr3 200142116 15 + 202621043 CCATACCTTCCACAC i panTro5.chr3 T 60 C 0 s panPan2.chrUn_NW_014024201v1 109421 15 + 190779 TCATACCTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01001831v1 54562 15 - 55620 CCGTACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=66645.000000 s hg38.chr3_KI270779v1_alt 146554 136 + 205312 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACC s panTro5.chr3 200142131 136 + 202621043 CCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109301 136 + 190779 CCATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 T 135 T 45 s gorGor5.CYUI01001831v1 54577 136 - 55620 CCGTACCTTCCACATCCGTACCTTCCACACCCGTACCTTCCACACCCGTACCTTCCACACCCGTACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=14405.000000 s hg38.chr3_KI270779v1_alt 146690 30 + 205312 CATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142267 30 + 202621043 CTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 C 0 T 30 s panPan2.chrUn_NW_014024201v1 109392 30 + 190779 CTTACCTTCCACACCCATACCTTCCACACT i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01001831v1 54713 29 - 55620 CATACCTTCCACA-CCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=6387.000000 s hg38.chr3_KI270779v1_alt 146720 13 + 205312 CATACCTTCCACA s panTro5.chr3 200142267 13 + 202621043 CTTACCTTCCACA i panTro5.chr3 T 30 C 0 s panPan2.chrUn_NW_014024201v1 109422 13 + 190779 CATACCTTCCACA i panPan2.chrUn_NW_014024201v1 C 0 T 134 s gorGor5.CYUI01001831v1 54742 13 - 55620 CATACCTTCCATA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=3864.000000 s hg38.chr3_KI270779v1_alt 146733 16 + 205312 GTCATACCTTCCACAC s panTro5.chr3 200142280 16 + 202621043 CCCATACCTTCCACAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54755 15 - 55620 -CCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 134 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=600.000000 s hg38.chr3_KI270779v1_alt 146749 1 + 205312 C s panTro5.chr3 200142296 1 + 202621043 C i panTro5.chr3 C 0 T 180 s panPan2.chrUn_NW_014024201v1 109301 1 + 190779 C i panPan2.chrUn_NW_014024201v1 T 134 C 0 s gorGor5.CYUI01001831v1 54770 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=2244.000000 s hg38.chr3_KI270779v1_alt 146750 15 + 205312 CATACCTTCCACAGT s panPan2.chrUn_NW_014024201v1 109302 15 + 190779 CATACCTACCACACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54771 14 - 55620 CATACCTTCCACAT- i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 180 + 202621043 T a score=23278.000000 s hg38.chr3_KI270779v1_alt 146765 47 + 205312 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACATCCA s panTro5.chr3 200142117 47 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACACCCA i panTro5.chr3 T 180 C 0 s panPan2.chrUn_NW_014024201v1 109317 47 + 190779 CGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54785 47 - 55620 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCA i gorGor5.CYUI01001831v1 C 0 T 791 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=5688.000000 s hg38.chr3_KI270779v1_alt 146812 11 + 205312 TACCTTCCACG s panTro5.chr3 200142164 11 + 202621043 TACCTTCCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109364 11 + 190779 TACCTTCCAAG i panPan2.chrUn_NW_014024201v1 C 0 T 75 s gorGor5.CYUI01001831v1 54041 11 - 55620 TACCTTCCACG i gorGor5.CYUI01001831v1 T 791 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=60567.000000 s hg38.chr3_KI270779v1_alt 146823 122 + 205312 GCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGCCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142175 122 + 202621043 GCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 C 0 T 150 s panPan2.chrUn_NW_014024201v1 109300 122 + 190779 GCCATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACT i panPan2.chrUn_NW_014024201v1 T 75 C 0 s gorGor5.CYUI01001831v1 54052 122 - 55620 GCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACATCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=6417.000000 s hg38.chr3_KI270779v1_alt 146945 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142147 15 + 202621043 CTTACCTTCCACACC i panTro5.chr3 T 150 C 0 s panPan2.chrUn_NW_014024201v1 109422 15 + 190779 CATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 75 s gorGor5.CYUI01001831v1 54174 14 - 55620 CATACCTTCC-CACC i gorGor5.CYUI01001831v1 C 0 I 792 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=39079.000000 s hg38.chr3_KI270779v1_alt 146960 73 + 205312 CATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACA s panTro5.chr3 200142162 73 + 202621043 CATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109362 73 + 190779 CATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panPan2.chrUn_NW_014024201v1 T 75 T 61 s gorGor5.CYUI01001831v1 54980 73 - 55620 CATACCTTCCACGGCCATAGCTTCCACACCCATATCTTCCACACCCATACCTTCCACACCCATACCTTCCACA i gorGor5.CYUI01001831v1 I 792 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=1598.000000 s hg38.chr3_KI270779v1_alt 147033 8 + 205312 GTCATACC s panTro5.chr3 200142235 8 + 202621043 CTCATACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 55053 8 - 55620 CTCGTACC i gorGor5.CYUI01001831v1 C 0 T 776 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 61 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=1719.000000 s hg38.chr3_KI270779v1_alt 147041 6 + 205312 TTCCAC s panTro5.chr3 200142243 6 + 202621043 TTCCAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54285 6 - 55620 TTCCAC i gorGor5.CYUI01001831v1 T 776 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 61 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=13925.000000 s hg38.chr3_KI270779v1_alt 147047 33 + 205312 GGCCATACCTTCCACACCCATACCTTCCACAGT s panTro5.chr3 200142249 33 + 202621043 ACTCATAACTTCCACACCCTTACCTTCCACACC i panTro5.chr3 C 0 T 165 s panPan2.chrUn_NW_014024201v1 109374 33 + 190779 GGCCATACCTTCCACACCCTTACCTTCCACACC i panPan2.chrUn_NW_014024201v1 T 61 C 0 s gorGor5.CYUI01001831v1 54291 33 - 55620 ATCCATACCTTCCACATCCATACCTTCCACAGC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=16458.000000 s hg38.chr3_KI270779v1_alt 147080 30 + 205312 CATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142117 30 + 202621043 CATACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 T 165 C 0 s panPan2.chrUn_NW_014024201v1 109407 30 + 190779 CATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01001831v1 54324 30 - 55620 CATACCTTCCACATCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=3883.000000 s hg38.chr3_KI270779v1_alt 147110 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142147 15 + 202621043 CTTACCTTCCACACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54354 15 - 55620 CATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 135 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=64340.000000 s hg38.chr3_KI270779v1_alt 147125 135 + 205312 CATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACATCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142162 135 + 202621043 CATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 C 0 T 30 s panPan2.chrUn_NW_014024201v1 109302 135 + 190779 CATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 T 135 T 136 s gorGor5.CYUI01001831v1 54369 135 - 55620 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACATCCATACCTTCCACATCCATACATTCCACATCCATACCTTCCACACCCATACCTTCCACACCCATACTTTCCACATCCATACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=7688.000000 s hg38.chr3_KI270779v1_alt 147260 30 + 205312 CTTACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142267 30 + 202621043 CTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 T 30 T 180 s gorGor5.CYUI01001831v1 54504 30 - 55620 CATACCTTCCACACCCGTACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=2430.000000 s hg38.chr3_KI270779v1_alt 147290 28 + 205312 CATACCTTCCACACCCATACCTTCCACG s gorGor5.CYUI01001831v1 54534 28 - 55620 CATACCTTCCACACCCGTACCTTCCACA i gorGor5.CYUI01001831v1 C 0 I 461 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 180 + 202621043 T a score=100.000000 s hg38.chr3_KI270779v1_alt 147318 1 + 205312 C s gorGor5.CYUI01001831v1 55023 1 - 55620 C i gorGor5.CYUI01001831v1 I 461 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 180 + 202621043 T a score=3462.000000 s hg38.chr3_KI270779v1_alt 147319 16 + 205312 CCATACCTTCCACAGT s panPan2.chrUn_NW_014024201v1 109301 16 + 190779 CCATACCTACCACACT i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 55024 16 - 55620 CCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 180 + 202621043 T a score=14505.000000 s hg38.chr3_KI270779v1_alt 147335 29 + 205312 CATACCTTCCACACCCATACCTTCCACGG s panTro5.chr3 200142117 29 + 202621043 CATACCTTCCACACCCATACCTTCCACAC i panTro5.chr3 T 180 C 0 s panPan2.chrUn_NW_014024201v1 109317 29 + 190779 CGTACCTTCCACACCCATACCTTCCACGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55040 29 - 55620 CATACCTTCCACACTCGTACCTTCCACGG i gorGor5.CYUI01001831v1 C 0 T 507 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=13011.000000 s hg38.chr3_KI270779v1_alt 147364 31 + 205312 CCATACCTTCCACACCCATACCTTCCACAGT s panTro5.chr3 200142146 31 + 202621043 CCTTACCTTCCACACCCATACCTTCCACGGC i panTro5.chr3 C 0 T 60 s panPan2.chrUn_NW_014024201v1 109346 31 + 190779 CCATATCTTCCACGGCCATACCTTCCAAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54562 31 - 55620 CCGTACCTTCCACACCCGTACCTTCCACATC i gorGor5.CYUI01001831v1 T 507 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=28324.000000 s hg38.chr3_KI270779v1_alt 147395 55 + 205312 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCTATACCTTCC s panTro5.chr3 200142117 55 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCC i panTro5.chr3 T 60 C 0 s panPan2.chrUn_NW_014024201v1 109377 55 + 190779 CATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54593 55 - 55620 CGTACCTTCCACACCCGTACCTTCCACACCCGTACCTTCCACACCCGTACCTTCC i gorGor5.CYUI01001831v1 C 0 T 460 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=1326.000000 s hg38.chr3_KI270779v1_alt 147450 3 + 205312 ACA s panTro5.chr3 200142172 3 + 202621043 ACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109432 3 + 190779 ACA i panPan2.chrUn_NW_014024201v1 C 0 T 60 s gorGor5.CYUI01001831v1 54188 3 - 55620 ACA i gorGor5.CYUI01001831v1 T 460 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=29350.000000 s hg38.chr3_KI270779v1_alt 147453 60 + 205312 GTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACA s panTro5.chr3 200142175 60 + 202621043 GCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109375 60 + 190779 GCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panPan2.chrUn_NW_014024201v1 T 60 T 134 s gorGor5.CYUI01001831v1 54191 57 - 55620 -CCATACCTTCCACACCCATACCTT-CACA-CCATACCTTCCACACCCATACCTTCCACA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=3816.000000 s hg38.chr3_KI270779v1_alt 147513 16 + 205312 TCCATACCTTCCACAC s panTro5.chr3 200142235 16 + 202621043 CTCATACCTTCCACAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54248 16 - 55620 TCCATACCTTCCACAT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 134 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=9113.000000 s hg38.chr3_KI270779v1_alt 147529 21 + 205312 CCATACCTTCCACACCCATAC s panTro5.chr3 200142251 21 + 202621043 TCATAACTTCCACACCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109301 21 + 190779 CCATACCTACCACACTCGTAC i panPan2.chrUn_NW_014024201v1 T 134 C 0 s gorGor5.CYUI01001831v1 54264 21 - 55620 CCATACCTTCCACACCCATAC i gorGor5.CYUI01001831v1 C 0 I 462 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=4791.000000 s hg38.chr3_KI270779v1_alt 147550 9 + 205312 CTTCCACAC s panTro5.chr3 200142272 9 + 202621043 CTTCCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109322 9 + 190779 CTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54747 9 - 55620 CTTCCATAC i gorGor5.CYUI01001831v1 I 462 I 193 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=7476.000000 s hg38.chr3_KI270779v1_alt 147559 13 + 205312 CCATACCTTCCAC s panTro5.chr3 200142281 13 + 202621043 CCATACCTTCCAC i panTro5.chr3 C 0 T 75 s panPan2.chrUn_NW_014024201v1 109331 13 + 190779 CCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54949 13 - 55620 CCATACCTTCCAC i gorGor5.CYUI01001831v1 I 193 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=27309.000000 s hg38.chr3_KI270779v1_alt 147572 62 + 205312 GCCCATACCTTCCACGCCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAC s panTro5.chr3 200142219 62 + 202621043 ACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACAC i panTro5.chr3 T 75 C 0 s panPan2.chrUn_NW_014024201v1 109344 62 + 190779 GGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 T 105 s gorGor5.CYUI01001831v1 54962 62 - 55620 ATCCATACCTTCCACACCCATACCTTCCACGGCCATAGCTTCCACACCCATATCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=7380.000000 s hg38.chr3_KI270779v1_alt 147634 14 + 205312 CCATACCTTCCACA s panTro5.chr3 200142281 14 + 202621043 CCATACCTTCCACA i panTro5.chr3 C 0 T 45 s panPan2.chrUn_NW_014024201v1 109301 14 + 190779 CCATACCTACCACA i panPan2.chrUn_NW_014024201v1 T 105 C 0 s gorGor5.CYUI01001831v1 55024 14 - 55620 CCATACCTTCCACA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=21245.000000 s hg38.chr3_KI270779v1_alt 147648 47 + 205312 GTCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACC s panTro5.chr3 200142250 47 + 202621043 CTCATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 T 45 T 181 s panPan2.chrUn_NW_014024201v1 109315 47 + 190779 CTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55038 47 - 55620 CCCATACCTTCCACACTCGTACCTTCCACGGCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=2636.000000 s hg38.chr3_KI270779v1_alt 147695 14 + 205312 CATACCTTCCACGG s panPan2.chrUn_NW_014024201v1 109362 14 + 190779 CATACCTTCCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55085 14 - 55620 CATACCTTCTACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I e panTro5.chr3 200142297 181 + 202621043 T a score=8829.000000 s hg38.chr3_KI270779v1_alt 147709 16 + 205312 CCATACCTTCCACACC s panTro5.chr3 200142116 16 + 202621043 CCATACCTTCCACACC i panTro5.chr3 T 181 C 0 s panPan2.chrUn_NW_014024201v1 109376 16 + 190779 CCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55099 16 - 55620 TCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 T 90 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=21937.000000 s hg38.chr3_KI270779v1_alt 147725 42 + 205312 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCAC s panTro5.chr3 200142132 42 + 202621043 CATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109392 42 + 190779 CTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 55025 42 - 55620 CATACCTTCCACACCCATACCTTCCACACTCGTACCTTCCAC i gorGor5.CYUI01001831v1 T 90 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=8087.000000 s hg38.chr3_KI270779v1_alt 147767 29 + 205312 GGCCATACCTTCCACACCCATACCTTCCA s panTro5.chr3 200142174 29 + 202621043 GGCCATACCTTCCACACCCATACCTTCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 55067 29 - 55620 GGCCATACCTTCCACACCCATACCTTCTA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109434 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=913.000000 s hg38.chr3_KI270779v1_alt 147796 4 + 205312 CAGT s panTro5.chr3 200142203 4 + 202621043 CACC i panTro5.chr3 C 0 T 90 s panPan2.chrUn_NW_014024201v1 109298 4 + 190779 CAGC i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 55096 4 - 55620 CACT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=7587.000000 s hg38.chr3_KI270779v1_alt 147800 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142117 15 + 202621043 CATACCTTCCACACC i panTro5.chr3 T 90 C 0 s panPan2.chrUn_NW_014024201v1 109302 15 + 190779 CATACCTACCACACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55100 15 - 55620 CATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 T 537 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=20571.000000 s hg38.chr3_KI270779v1_alt 147815 42 + 205312 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCAC s panTro5.chr3 200142132 42 + 202621043 CATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109317 42 + 190779 CGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54578 42 - 55620 CGTACCTTCCACATCCGTACCTTCCACACCCGTACCTTCCAC i gorGor5.CYUI01001831v1 T 537 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908781 1 + 123690457 I a score=576.000000 s hg38.chr3_KI270779v1_alt 147857 2 + 205312 GG s panTro5.chr3 200142174 2 + 202621043 GG i panTro5.chr3 C 0 T 60 s panPan2.chrUn_NW_014024201v1 109359 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54620 2 - 55620 AC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908782 2 + 123690457 GG i nomLeu3.chr11 I 1 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=15546.000000 s hg38.chr3_KI270779v1_alt 147859 23 + 205312 CCATACCTTCCACACCCATACCT s panTro5.chr3 200142116 23 + 202621043 CCATACCTTCCACACCCATACCT i panTro5.chr3 T 60 C 0 s panPan2.chrUn_NW_014024201v1 109361 23 + 190779 CCATACCTTCCAAGGCCATACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54622 23 - 55620 CCGTACCTTCCACACCCGTACCT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908784 23 + 123690457 CCGTACCTTCGACGGGCATATCT i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=26160.000000 s hg38.chr3_KI270779v1_alt 147882 51 + 205312 TCCACACCCTTACCTTCCACACCCATACCTTCCACACCCATACCTTCCACA s panTro5.chr3 200142139 51 + 202621043 TCCACACCCTTACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109384 51 + 190779 TCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panPan2.chrUn_NW_014024201v1 C 0 T 120 s gorGor5.CYUI01001831v1 54645 51 - 55620 TCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=-8.000000 s hg38.chr3_KI270779v1_alt 147933 2 + 205312 GT s panTro5.chr3 200142190 2 + 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109315 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 T 120 C 0 s gorGor5.CYUI01001831v1 54696 2 - 55620 CC i gorGor5.CYUI01001831v1 C 0 I 58 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=49935.000000 s hg38.chr3_KI270779v1_alt 147935 105 + 205312 CATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142192 105 + 202621043 CATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 C 0 T 150 s panPan2.chrUn_NW_014024201v1 109317 105 + 190779 CGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54756 104 - 55620 CATACCTTCCACACCCATACCTTCCACA-TCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACC i gorGor5.CYUI01001831v1 I 58 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=4311.000000 s hg38.chr3_KI270779v1_alt 148040 15 + 205312 CATACCTTCCACACC s panPan2.chrUn_NW_014024201v1 109422 15 + 190779 CATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 54860 15 - 55620 CATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e panTro5.chr3 200142297 150 + 202621043 T a score=11009.000000 s hg38.chr3_KI270779v1_alt 148055 44 + 205312 CATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAC s panTro5.chr3 200142147 44 + 202621043 CTTACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACAC i panTro5.chr3 T 150 C 0 s gorGor5.CYUI01001831v1 54875 44 - 55620 CATACCTTTCACACCCATACCTTCCACATCCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=6781.000000 s hg38.chr3_KI270779v1_alt 148099 16 + 205312 CCATACCTTCCACAGT s panTro5.chr3 200142191 16 + 202621043 CCATACCTTCCACACC i panTro5.chr3 C 0 T 90 s panPan2.chrUn_NW_014024201v1 109301 16 + 190779 CCATACCTACCACACT i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 54919 16 - 55620 CCATACCTTCCACGGC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=20381.000000 s hg38.chr3_KI270779v1_alt 148115 44 + 205312 CATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAC s panTro5.chr3 200142117 44 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACAC i panTro5.chr3 T 90 C 0 s panPan2.chrUn_NW_014024201v1 109317 44 + 190779 CGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGG i panPan2.chrUn_NW_014024201v1 C 0 T 60 s gorGor5.CYUI01001831v1 54935 44 - 55620 CATAGCTTCCACACCCATACCTTCCACATCCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=4114.000000 s hg38.chr3_KI270779v1_alt 148159 16 + 205312 CCATACCTTCCACAGT s panTro5.chr3 200142161 16 + 202621043 CCATACCTTCCACGGC i panTro5.chr3 C 0 T 60 s gorGor5.CYUI01001831v1 54979 16 - 55620 CCATACCTTCCACGGC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109361 60 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=1269.000000 s hg38.chr3_KI270779v1_alt 148175 6 + 205312 CATACC s panTro5.chr3 200142117 6 + 202621043 CATACC i panTro5.chr3 T 60 C 0 s gorGor5.CYUI01001831v1 54995 6 - 55620 CATAGC i gorGor5.CYUI01001831v1 C 0 T 716 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109361 60 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=2030.000000 s hg38.chr3_KI270779v1_alt 148181 8 + 205312 TTCCACAC s panTro5.chr3 200142123 8 + 202621043 TTCCACAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54285 8 - 55620 TTCCACAT i gorGor5.CYUI01001831v1 T 716 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109361 60 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=67311.000000 s hg38.chr3_KI270779v1_alt 148189 136 + 205312 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACC s panTro5.chr3 200142131 136 + 202621043 CCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109301 136 + 190779 CCATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 T 60 T 135 s gorGor5.CYUI01001831v1 54293 136 - 55620 CCATACCTTCCACATCCATACCTTCCACAGCCATACCTTCCACATCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACATCCATACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=13493.000000 s hg38.chr3_KI270779v1_alt 148325 30 + 205312 CATACCTTCCACAGTCATACCTTCCACACC s panTro5.chr3 200142267 30 + 202621043 CTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 C 0 T 30 s panPan2.chrUn_NW_014024201v1 109302 30 + 190779 CATACCTACCACACTCGTACCTTCCACACC i panPan2.chrUn_NW_014024201v1 T 135 C 0 s gorGor5.CYUI01001831v1 54429 30 - 55620 CATACATTCCACATCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=13483.000000 s hg38.chr3_KI270779v1_alt 148355 30 + 205312 CATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142267 30 + 202621043 CTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 T 30 T 45 s panPan2.chrUn_NW_014024201v1 109332 30 + 190779 CATACCTTCCACGGCCATATCTTCCACGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54459 30 - 55620 CATACCTTCCACACCCATACTTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=21182.000000 s hg38.chr3_KI270779v1_alt 148385 45 + 205312 CATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142252 45 + 202621043 CATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 T 45 T 150 s panPan2.chrUn_NW_014024201v1 109362 45 + 190779 CATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54489 45 - 55620 CATACCTTCCACATCCATACCTTCCACACCCGTACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=14277.000000 s hg38.chr3_KI270779v1_alt 148430 28 + 205312 CATACCTTCCACACCCATACCTTCCACA s panTro5.chr3 200142147 28 + 202621043 CTTACCTTCCACACCCATACCTTCCACG i panTro5.chr3 T 150 C 0 s panPan2.chrUn_NW_014024201v1 109407 28 + 190779 CATACCTTCCACACTCATACCTTCCACA i panPan2.chrUn_NW_014024201v1 C 0 T 61 s gorGor5.CYUI01001831v1 54534 28 - 55620 CATACCTTCCACACCCGTACCTTCCACA i gorGor5.CYUI01001831v1 C 0 I 193 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=1215.000000 s hg38.chr3_KI270779v1_alt 148458 14 + 205312 GTCATACCTTCCAC s panTro5.chr3 200142175 14 + 202621043 GCCATACCTTCCAC i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 61 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e gorGor5.CYUI01001831v1 54562 193 - 55620 I a score=-112.000000 s hg38.chr3_KI270779v1_alt 148472 2 + 205312 GG s panTro5.chr3 200142189 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109374 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 T 61 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e gorGor5.CYUI01001831v1 54562 193 - 55620 I a score=14415.000000 s hg38.chr3_KI270779v1_alt 148474 31 + 205312 CCATACCTTCCACACCCATACCTTCCACAGT s panTro5.chr3 200142191 31 + 202621043 CCATACCTTCCACACCCATACCTTCCACACT i panTro5.chr3 C 0 T 105 s panPan2.chrUn_NW_014024201v1 109376 31 + 190779 CCATACCTTCCACACCCTTACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54755 30 - 55620 CCATACCTTCCACACCCATACCTTCCACAT- i gorGor5.CYUI01001831v1 I 193 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=16851.000000 s hg38.chr3_KI270779v1_alt 148505 30 + 205312 CATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142117 30 + 202621043 CATACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 T 105 C 0 s panPan2.chrUn_NW_014024201v1 109407 30 + 190779 CATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01001831v1 54785 30 - 55620 CATACCTTCCACACCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=3883.000000 s hg38.chr3_KI270779v1_alt 148535 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142147 15 + 202621043 CTTACCTTCCACACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54815 15 - 55620 CATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 135 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=42601.000000 s hg38.chr3_KI270779v1_alt 148550 89 + 205312 CATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACATCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAC s panTro5.chr3 200142162 89 + 202621043 CATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109302 89 + 190779 CATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACAC i panPan2.chrUn_NW_014024201v1 T 135 C 0 s gorGor5.CYUI01001831v1 54830 89 - 55620 CATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTTCACACCCATACCTTCCACATCCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 T 357 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=22525.000000 s hg38.chr3_KI270779v1_alt 148639 46 + 205312 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142251 46 + 202621043 TCATAACTTCCACACCCTTACCTTCCACACCCATACCTTCCACACC i panTro5.chr3 C 0 T 30 s panPan2.chrUn_NW_014024201v1 109391 46 + 190779 CCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 54562 46 - 55620 CCGTACCTTCCACACCCGTACCTTCCACATCCGTACCTTCCACACC i gorGor5.CYUI01001831v1 T 357 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=3901.000000 s hg38.chr3_KI270779v1_alt 148685 15 + 205312 CTTACCTTCCACACC s panTro5.chr3 200142267 15 + 202621043 CTTACCTTCCACACC i panTro5.chr3 T 30 C 0 s gorGor5.CYUI01001831v1 54608 15 - 55620 CGTACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 I 357 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=3617.000000 s hg38.chr3_KI270779v1_alt 148700 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142282 15 + 202621043 CATACCTTCCACACC i panTro5.chr3 C 0 T 180 s gorGor5.CYUI01001831v1 54980 15 - 55620 CATACCTTCCACGGC i gorGor5.CYUI01001831v1 I 357 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=2296.000000 s hg38.chr3_KI270779v1_alt 148715 29 + 205312 CATACCTTCCACACCCATACCTTCCACGC s gorGor5.CYUI01001831v1 54995 29 - 55620 CATAGCTTCCACACCCATATCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e panTro5.chr3 200142297 180 + 202621043 T a score=3462.000000 s hg38.chr3_KI270779v1_alt 148744 16 + 205312 CCATACCTTCCACAGT s panPan2.chrUn_NW_014024201v1 109301 16 + 190779 CCATACCTACCACACT i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 55024 16 - 55620 CCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e panTro5.chr3 200142297 180 + 202621043 T a score=27551.000000 s hg38.chr3_KI270779v1_alt 148760 60 + 205312 CATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACAGT s panTro5.chr3 200142117 60 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGGC i panTro5.chr3 T 180 T 60 s panPan2.chrUn_NW_014024201v1 109317 60 + 190779 CGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55040 60 - 55620 CATACCTTCCACACTCGTACCTTCCACGGCCATACCTTCCACACCCATACCTTCTACACT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=8622.000000 s hg38.chr3_KI270779v1_alt 148820 15 + 205312 CATACCTTCCACACC s panTro5.chr3 200142117 15 + 202621043 CATACCTTCCACACC i panTro5.chr3 T 60 C 0 s panPan2.chrUn_NW_014024201v1 109377 15 + 190779 CATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55100 15 - 55620 CATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 T 507 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=21394.000000 s hg38.chr3_KI270779v1_alt 148835 43 + 205312 CATACCTTCCACACCCATACCTTCCACACCTATACCTTCCACA s panTro5.chr3 200142132 43 + 202621043 CATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109392 43 + 190779 CTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panPan2.chrUn_NW_014024201v1 C 0 T 60 s gorGor5.CYUI01001831v1 54608 43 - 55620 CGTACCTTCCACACCCGTACCTTCCACACCCGTACCTTCCACA i gorGor5.CYUI01001831v1 T 507 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=667.000000 s hg38.chr3_KI270779v1_alt 148878 2 + 205312 GT s panTro5.chr3 200142175 2 + 202621043 GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109375 2 + 190779 GC i panPan2.chrUn_NW_014024201v1 T 60 C 0 s gorGor5.CYUI01001831v1 54651 2 - 55620 GT i gorGor5.CYUI01001831v1 C 0 I 74 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=30130.000000 s hg38.chr3_KI270779v1_alt 148880 58 + 205312 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACA s panTro5.chr3 200142177 58 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109377 58 + 190779 CATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACA i panPan2.chrUn_NW_014024201v1 C 0 T 134 s gorGor5.CYUI01001831v1 54727 57 - 55620 CATACCTTCCACACCCATACCTTCCATA-CCATACCTTCCACACCCATACCTTCCACA i gorGor5.CYUI01001831v1 I 74 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=67.000000 s hg38.chr3_KI270779v1_alt 148938 2 + 205312 TC s panTro5.chr3 200142235 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54784 2 - 55620 TC i gorGor5.CYUI01001831v1 C 0 T 521 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 134 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=1337.000000 s hg38.chr3_KI270779v1_alt 148940 14 + 205312 CATACCTTCCACAC s panTro5.chr3 200142237 14 + 202621043 CATACCTTCCACAC i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109435 134 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e gorGor5.CYUI01001831v1 54786 521 - 55620 T a score=38.000000 s hg38.chr3_KI270779v1_alt 148954 1 + 205312 C s panTro5.chr3 200142251 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109301 1 + 190779 C i panPan2.chrUn_NW_014024201v1 T 134 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e gorGor5.CYUI01001831v1 54786 521 - 55620 T a score=8906.000000 s hg38.chr3_KI270779v1_alt 148955 20 + 205312 CATACCTTCCACACCCATAC s panTro5.chr3 200142252 20 + 202621043 CATAACTTCCACACCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109302 20 + 190779 CATACCTACCACACTCGTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54265 20 - 55620 CATACCTTCCACACCCATAC i gorGor5.CYUI01001831v1 T 521 I 89 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=12660.000000 s hg38.chr3_KI270779v1_alt 148975 22 + 205312 CTTCCACACCCATACCTTCCAC s panTro5.chr3 200142272 22 + 202621043 CTTCCACACCCATACCTTCCAC i panTro5.chr3 C 0 T 75 s panPan2.chrUn_NW_014024201v1 109322 22 + 190779 CTTCCACACCCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54374 22 - 55620 CTTCCACACCCATACCTTCCAC i gorGor5.CYUI01001831v1 I 89 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=26813.000000 s hg38.chr3_KI270779v1_alt 148997 62 + 205312 GCCCATACCTTCCACGCCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAC s panTro5.chr3 200142219 62 + 202621043 ACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACAC i panTro5.chr3 T 75 C 0 s panPan2.chrUn_NW_014024201v1 109344 62 + 190779 GGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 T 105 s gorGor5.CYUI01001831v1 54396 62 - 55620 ACCCATACCTTCCACATCCATACCTTCCACATCCATACATTCCACATCCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=7380.000000 s hg38.chr3_KI270779v1_alt 149059 14 + 205312 CCATACCTTCCACA s panTro5.chr3 200142281 14 + 202621043 CCATACCTTCCACA i panTro5.chr3 C 0 T 178 s panPan2.chrUn_NW_014024201v1 109301 14 + 190779 CCATACCTACCACA i panPan2.chrUn_NW_014024201v1 T 105 C 0 s gorGor5.CYUI01001831v1 54458 14 - 55620 CCATACCTTCCACA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=-121.000000 s hg38.chr3_KI270779v1_alt 149073 2 + 205312 GT s panPan2.chrUn_NW_014024201v1 109315 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54472 2 - 55620 CC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e panTro5.chr3 200142295 178 + 202621043 T a score=2679.000000 s hg38.chr3_KI270779v1_alt 149075 6 + 205312 CATACC s panTro5.chr3 200142117 6 + 202621043 CATACC i panTro5.chr3 T 178 C 0 s panPan2.chrUn_NW_014024201v1 109317 6 + 190779 CGTACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54474 6 - 55620 CATACT i gorGor5.CYUI01001831v1 C 0 T 195 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=11325.000000 s hg38.chr3_KI270779v1_alt 149081 23 + 205312 TTCCACACCCATACCTTCCACGG s panTro5.chr3 200142123 23 + 202621043 TTCCACACCCATACCTTCCACAC i panTro5.chr3 C 0 T 30 s panPan2.chrUn_NW_014024201v1 109323 23 + 190779 TTCCACACCCATACCTTCCACGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54285 23 - 55620 TTCCACATCCATACCTTCCACAT i gorGor5.CYUI01001831v1 T 195 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=13455.000000 s hg38.chr3_KI270779v1_alt 149104 30 + 205312 CCATACCTTCCACACCCATACCTTCCACGG s panTro5.chr3 200142116 30 + 202621043 CCATACCTTCCACACCCATACCTTCCACAC i panTro5.chr3 T 30 T 30 s panPan2.chrUn_NW_014024201v1 109346 30 + 190779 CCATATCTTCCACGGCCATACCTTCCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 54308 30 - 55620 CCATACCTTCCACAGCCATACCTTCCACAT i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=32370.000000 s hg38.chr3_KI270779v1_alt 149134 61 + 205312 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142116 61 + 202621043 CCATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGGC i panTro5.chr3 T 30 C 0 s panPan2.chrUn_NW_014024201v1 109376 61 + 190779 CCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 105 s gorGor5.CYUI01001831v1 54338 61 - 55620 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=6854.000000 s hg38.chr3_KI270779v1_alt 149195 15 + 205312 CATACCTTCCACAGT s panTro5.chr3 200142177 15 + 202621043 CATACCTTCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109332 15 + 190779 CATACCTTCCACGGC i panPan2.chrUn_NW_014024201v1 T 105 C 0 s gorGor5.CYUI01001831v1 54399 15 - 55620 CATACCTTCCACATC i gorGor5.CYUI01001831v1 C 0 I 209 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=44358.000000 s hg38.chr3_KI270779v1_alt 149210 90 + 205312 CATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC s panTro5.chr3 200142192 90 + 202621043 CATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACACCCTTACCTTCCACACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109347 90 + 190779 CATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACC i panPan2.chrUn_NW_014024201v1 C 0 T 136 s gorGor5.CYUI01001831v1 54623 90 - 55620 CGTACCTTCCACACCCGTACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACC i gorGor5.CYUI01001831v1 I 209 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=4011.000000 s hg38.chr3_KI270779v1_alt 149300 14 + 205312 CATACCTTCCACAC s panTro5.chr3 200142282 14 + 202621043 CATACCTTCCACAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 54713 14 - 55620 CATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 I 102 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=300.000000 s hg38.chr3_KI270779v1_alt 149314 1 + 205312 C s panTro5.chr3 200142296 1 + 202621043 C i panTro5.chr3 C 0 T 122 s gorGor5.CYUI01001831v1 54829 1 - 55620 C i gorGor5.CYUI01001831v1 I 102 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=1237.000000 s hg38.chr3_KI270779v1_alt 149315 13 + 205312 CATACCTTCCACA s gorGor5.CYUI01001831v1 54830 13 - 55620 CATACCTTCCACA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C e panTro5.chr3 200142297 122 + 202621043 T a score=4340.000000 s hg38.chr3_KI270779v1_alt 149328 16 + 205312 GTCATACCTTCCACAC s panTro5.chr3 200142175 16 + 202621043 GCCATACCTTCCACAC i panTro5.chr3 T 122 C 0 s gorGor5.CYUI01001831v1 54843 16 - 55620 GTCATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109437 136 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=7372.000000 s hg38.chr3_KI270779v1_alt 149344 16 + 205312 CCATACCTTCCACAGT s panTro5.chr3 200142191 16 + 202621043 CCATACCTTCCACACC i panTro5.chr3 C 0 T 90 s panPan2.chrUn_NW_014024201v1 109301 16 + 190779 CCATACCTACCACACT i panPan2.chrUn_NW_014024201v1 T 136 C 0 s gorGor5.CYUI01001831v1 54859 16 - 55620 CCATACCTTCCACACC i gorGor5.CYUI01001831v1 C 0 T 148 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=19632.000000 s hg38.chr3_KI270779v1_alt 149360 44 + 205312 CATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAC s panTro5.chr3 200142117 44 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACAC i panTro5.chr3 T 90 C 0 s panPan2.chrUn_NW_014024201v1 109317 44 + 190779 CGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGG i panPan2.chrUn_NW_014024201v1 C 0 T 60 s gorGor5.CYUI01001831v1 54727 43 - 55620 CATACCTTCCACACCCATACCTTCCATA-CCATACCTTCCACAC i gorGor5.CYUI01001831v1 T 148 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=2748.000000 s hg38.chr3_KI270779v1_alt 149404 16 + 205312 CCATACCTTCCACAGT s panTro5.chr3 200142161 16 + 202621043 CCATACCTTCCACGGC i panTro5.chr3 C 0 T 60 s gorGor5.CYUI01001831v1 54770 15 - 55620 CCATACCTTCCACAT- i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109361 60 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=4011.000000 s hg38.chr3_KI270779v1_alt 149420 14 + 205312 CATACCTTCCACAC s panTro5.chr3 200142117 14 + 202621043 CATACCTTCCACAC i panTro5.chr3 T 60 C 0 s gorGor5.CYUI01001831v1 54785 14 - 55620 CATACCTTCCACAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109361 60 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=66845.000000 s hg38.chr3_KI270779v1_alt 149434 135 + 205312 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAC s panTro5.chr3 200142131 135 + 202621043 CCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCACACTCATAACTTCCACAC i panTro5.chr3 C 0 T 150 s panPan2.chrUn_NW_014024201v1 109301 135 + 190779 CCATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCACAC i panPan2.chrUn_NW_014024201v1 T 60 C 0 s gorGor5.CYUI01001831v1 54799 135 - 55620 CCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTTCACACCCATACCTTCCACATCCATACCTTCCACACCCATACCTTCCACGG i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=600.000000 s hg38.chr3_KI270779v1_alt 149569 1 + 205312 C s panTro5.chr3 200142116 1 + 202621043 C i panTro5.chr3 T 150 C 0 s panPan2.chrUn_NW_014024201v1 109436 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 T 135 s gorGor5.CYUI01001831v1 54934 1 - 55620 C i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=63445.000000 s hg38.chr3_KI270779v1_alt 149570 132 + 205312 CATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATAGCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCAC s panTro5.chr3 200142117 132 + 202621043 CATACCTTCCACACCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCATACCTTCCACACTCATACCTTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109302 132 + 190779 CATACCTACCACACTCGTACCTTCCACACCCATACCTTCCACGGCCATATCTTCCACGGCCATACCTTCCAAGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACTCATACCTTCCAC i panPan2.chrUn_NW_014024201v1 T 135 T 43 s gorGor5.CYUI01001831v1 54935 132 - 55620 CATAGCTTCCACACCCATACCTTCCACATCCATACCTTCCACACCCATACCTTCCACGGCCATAGCTTCCACACCCATATCTTCCACACCCATACCTTCCACACCCATACCTTCCACACTCGTACCTTCCAC i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=-112.000000 s hg38.chr3_KI270779v1_alt 149702 2 + 205312 GG s panTro5.chr3 200142249 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01001831v1 55067 2 - 55620 GG i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e panPan2.chrUn_NW_014024201v1 109434 43 + 190779 T e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=8049.000000 s hg38.chr3_KI270779v1_alt 149704 18 + 205312 CCATACCTTCCACACCCA s panTro5.chr3 200142251 18 + 202621043 TCATAACTTCCACACCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109391 18 + 190779 CCTTACCTTCCACACCCA i panPan2.chrUn_NW_014024201v1 T 43 C 0 s gorGor5.CYUI01001831v1 55069 18 - 55620 CCATACCTTCCACACCCA i gorGor5.CYUI01001831v1 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e saiBol1.JH378146 477912 1 + 17725628 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=3296.000000 s hg38.chr3_KI270779v1_alt 149722 4 + 205312 TACC s panTro5.chr3 200142269 4 + 202621043 TACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109409 4 + 190779 TACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55087 4 - 55620 TACC i gorGor5.CYUI01001831v1 C 0 C 0 s saiBol1.JH378146 477913 4 + 17725628 TACT i saiBol1.JH378146 I 1 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e macNem1.NW_012014355v1 569329 0 + 19675229 C e calJac3.chr17 955860 3 - 74750902 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e manLeu1.NW_012102020v1 611319 0 - 1977891 C e chlSab2.chr15 433227 0 - 91754291 C e cerAty1.NW_012004056v1 505551 0 + 16847902 C e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=17334.000000 s hg38.chr3_KI270779v1_alt 149726 8 + 205312 TTCCACAC s panTro5.chr3 200142273 8 + 202621043 TTCCACAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109413 8 + 190779 TTCCACAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55091 8 - 55620 TTCTACAC i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 569329 8 + 19675229 TTCCACGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505551 8 + 16847902 TTCCACGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433227 8 - 91754291 TTCCACGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611319 8 - 1977891 TTCCACGG i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 477917 8 + 17725628 TTTCACTG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e cebCap1.NW_016107444v1 442790 13 - 6778120 I e calJac3.chr17 955860 3 - 74750902 I e colAng1.NW_012118932v1 474082 5 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=26158.000000 s hg38.chr3_KI270779v1_alt 149734 5 + 205312 CCATA s panTro5.chr3 200142281 5 + 202621043 CCATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109421 5 + 190779 TCATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55099 5 - 55620 TCATA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 569337 5 + 19675229 CCATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505559 5 + 16847902 CCATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433235 5 - 91754291 CCATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611327 5 - 1977891 CCATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474087 5 + 7796314 CCATA i colAng1.NW_012118932v1 I 5 C 0 s calJac3.chr17 955863 5 - 74750902 CCATG i calJac3.chr17 I 3 C 0 s saiBol1.JH378146 477925 5 + 17725628 CCATA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442803 5 - 6778120 CCATG i cebCap1.NW_016107444v1 I 13 C 0 e otoGar3.GL873829 433452 2 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=22698.000000 s hg38.chr3_KI270779v1_alt 149739 3 + 205312 CCT s panTro5.chr3 200142286 3 + 202621043 CCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109426 3 + 190779 CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55104 3 - 55620 CCT i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 569342 3 + 19675229 CCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505564 3 + 16847902 CCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433240 3 - 91754291 CCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611332 3 - 1977891 CCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474092 3 + 7796314 CCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955868 3 - 74750902 CCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477930 3 + 17725628 CCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442808 3 - 6778120 CCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433454 3 - 608964 CCT i otoGar3.GL873829 I 2 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e canFam3.chr33 29084001 17 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=118407.000000 s hg38.chr3_KI270779v1_alt 149742 17 + 205312 TCCACACCTTTGTTCCA s panTro5.chr3 200142289 17 + 202621043 TCCACACCTTTGTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109429 17 + 190779 TCCACACCTTTGTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55107 17 - 55620 TCCACACCTTTGTTCCA i gorGor5.CYUI01001831v1 C 0 C 0 s macNem1.NW_012014355v1 569345 17 + 19675229 TCCGCACTTTTGTTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505567 17 + 16847902 TCCGCACTTTTGTTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433243 17 - 91754291 TCCGCACTTTTGTTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611335 17 - 1977891 TCCGCACTTTTGTTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474095 17 + 7796314 TCCGCACTTTTGTTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 955871 17 - 74750902 TCCACACCTTCCTTCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477933 17 + 17725628 TTCACACCTTTGTTCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442811 17 - 6778120 TCCACACCTTTGTTCCA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433457 17 - 608964 TCTGGACCTTTGTTCGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084018 17 + 31377067 TCTACACTTTTATTCCA i canFam3.chr33 I 17 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I e nomLeu3.chr11 120908807 0 + 123690457 C a score=39882.000000 s hg38.chr3_KI270779v1_alt 149759 5 + 205312 GCTGT s panTro5.chr3 200142306 5 + 202621043 GCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109446 5 + 190779 GCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55124 5 - 55620 GCTGT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908807 5 + 123690457 GCTGT i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 569362 5 + 19675229 GCTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 505584 5 + 16847902 GCTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433260 5 - 91754291 GCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611352 5 - 1977891 GCTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474112 5 + 7796314 GCTGT i colAng1.NW_012118932v1 C 0 I 17 s calJac3.chr17 955888 5 - 74750902 GCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477950 5 + 17725628 GCTGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442828 5 - 6778120 GCTGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433474 5 - 608964 GAGGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084035 5 + 31377067 GTTCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=30989.000000 s hg38.chr3_KI270779v1_alt 149764 5 + 205312 TCCCG s panTro5.chr3 200142311 5 + 202621043 TCCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109451 5 + 190779 TCCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55129 5 - 55620 TCCCG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908812 5 + 123690457 TCCTG i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 569367 5 + 19675229 TCCCG i macNem1.NW_012014355v1 C 0 I 13 s cerAty1.NW_012004056v1 505589 5 + 16847902 tcccg i cerAty1.NW_012004056v1 C 0 I 13 s chlSab2.chr15 433265 5 - 91754291 TCCCG i chlSab2.chr15 C 0 I 13 s manLeu1.NW_012102020v1 611357 5 - 1977891 TCCCG i manLeu1.NW_012102020v1 C 0 I 13 s calJac3.chr17 955893 5 - 74750902 TCCCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477955 5 + 17725628 TCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442833 5 - 6778120 TCCCG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433479 3 - 608964 --TCG i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29084040 5 + 31377067 TCAAG i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e colAng1.NW_012118932v1 474117 17 + 7796314 I e macFas5.chr2 83084 14732 + 192460366 M e rheMac8.chr2 202485639 30 + 204787373 I a score=2173517.000000 s hg38.chr3_KI270779v1_alt 149769 303 + 205312 CCCTCCTCCCTGCCTGGGGTGCTCCTCCATCCCCGG-----------------------------------------------CTCTGCATTCCTTAGG-GCCTTCCATTGTGTGCACTTAGACCCTGGGATGAGTCCTCTAACCGCCGCTACCG-GACCGTCCATCTATCCCTTGCTGAATGGCACTGGGGTCATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGGA-GCGACTCCGATGCTGTGTCCCTGTCCTCGGT-AAGGCTCTCCCCACCCGAGAGAGCAGAGACTGTGGG-AAGTAGGCTGAGAGGGAGCCTTCAGTTACATCACCC s panTro5.chr3 200142316 303 + 202621043 CCCTCCTCCCTGCCTGGGGTGCTCCTCCATCGCCGG-----------------------------------------------CTCTGCATTCCTTAGG-GCCTTCCATTGTGTGCACTTAGACCCTGGGATGAGTCCTCTAACCGCCTCTACCA-GACCGTCCATCTATCCCTTCCTGAATGGCACTGGGGTCATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCAGT-AAGGCCCTCCCCACCCGAGAGAGCAGAGACTGTGGG-AAGTAGGCTGAGAGGGAGCCTTCAGTTACATCACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109456 303 + 190779 CCCTCCTCCCTACCTGGGGTGCTCCTCCATCGCCGG-----------------------------------------------CTCTGCATTCCTTAGG-GCCTTCCATTGTGTGCACTTAGACCCTGGGATGAGTCCTCTAACCGCTTCTACCA-GACCGTCCATCTATCCCTTCCTGAATGGCACTGGGGTCATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCAGT-AAGGCCCTCCCCACCCGAGAGAGCAGAGACTGTGGG-AAGTAGGCTGAGAGGGAGCCTTCAGTTACATCACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55134 302 - 55620 CCCTCCTCCCTGCCTGGGGTGCTCCTCCATCCCCGG-----------------------------------------------CTCTGCATTCCTTAGG-GCCTTCCATTGTGTGCACTTAGACCCTGGGATGAGTCCTCT-ACCGCCTCTACCA-GACCGTCCATCTATCCCTTGCTGAATGGCACTGGGGTAATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCACAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCGGT-AAGGCCCTCCCCACCCGAGAGAGCAGAGACTGTGGG-AAGTAGGCTGAGAGGGAGCCTTCAGTTACATCACCC i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120908817 303 + 123690457 CCCTCCTCCCTGCTTGGGGTGCTCCTCCATCCCTGT-----------------------------------------------CTCTGCATTCCTCAGG-GCCTTCCATTGTGTGCACTTAGACCCTGGGATAAGCCCTCTAACCGCCTCTATGA-GACAGTCCATCTGTCTCTTGCTGAATGGCACCGAGGTCATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGTTGTGTTCCTGTGCTTGGT-AAGGCCCTCCCGACCCGAGAGAGCAGAGACTGTGGG-AAGCAGGCTGAGCGGGAGCCTTCAGTTACGTCGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485669 303 + 204787373 CCCTCCTCCCTACCCGGGGTGCTCTCCATCCCCCGG-----------------------------------------------CTCTGCCTTCCTTAGG-GCTTTCCATTGTGTGTGCTTAGACCCTGGCATGAGTCCTCTAACCGCCTCTACCA-GACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCACT-AAGGCCTTGCCGACCCAAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCG i rheMac8.chr2 I 30 C 0 s macNem1.NW_012014355v1 569385 303 + 19675229 CCCTCCTCCCTGCCCAGGGTGCTCTCCACCCCCCGG-----------------------------------------------CTCTGCCATCCTTAGG-GCTTTCCATTGTGTGTGCTTAGACCCTGGCATGAGTCCTCTAACCGCCTCTACCA-GACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCAGT-AAGGCCTTGCTGACCCAAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCG i macNem1.NW_012014355v1 I 13 C 0 s cerAty1.NW_012004056v1 505607 303 + 16847902 ccctcctccctgccCGGGGTGCTCTCCATCCCCCGG-----------------------------------------------CTCTGCCTTCCTTAGG-GCTTTCCATTGTGTGCGCTTAGACCCTGGCATGAGTCCTCTAACCACCTCTACCG-GACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGACCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCTGATGCTGTGTCCCTGTCCTCACT-AAGGCCTTGCCGACCCAAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCG i cerAty1.NW_012004056v1 I 13 C 0 s chlSab2.chr15 433283 303 - 91754291 CCCTCCTCCCTGCCCGGGGTGCTCTCCACCCCCGGG-----------------------------------------------CTCTGCCTTCCTTAGG-GCTTTCCATTGTGTGCGCTTAGACCCTGGCACGAGTCCTCTAACCACCTCTACCA-GACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCAGT-AAGGCCCTCCCGACCCGAAAGAGCAAAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCG i chlSab2.chr15 I 13 C 0 s manLeu1.NW_012102020v1 611375 303 - 1977891 CCCTCCTCTCTGCCCGGGGTGCTCTCCATCCCCCGG-----------------------------------------------CTCTGCCTTCCTTAGG-GCTTTCCATTGTGTGTGCTTAGACCCTGGCATGAGTCCTCTAACCGCCTCTACCA-GACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGTCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCTGATGCTGTGTCCCTGTCCTCACT-AAGGCCTTGCCGACCCAAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCG i manLeu1.NW_012102020v1 I 13 C 0 s colAng1.NW_012118932v1 474134 302 + 7796314 CCCTCCTCCCTGCCCAGGGTGCTCTCCA-CCCCTGG-----------------------------------------------CTCTGCCTTCCTTACA-GCTTTCCATTGTGTGCGCTTAGACCCTGGCATGAGTCCTCTAACCGCCTCTACCA-GACAATCCGTCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GTGACTCCGATGCTGTGTCCCTGTCCTCAGT-AAGGCCCTCCCGACCCGAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCTTCAGTGACATCACCC i colAng1.NW_012118932v1 I 17 C 0 s calJac3.chr17 955898 260 - 74750902 CCCTCCTCCCTG-------------------------------------------------------------------------------CCCTGAGGCGTTTTCCATTGTGTGTGCTTATGCCCTGGGATTAATCCTCTAACTGCCTCTACCA-GATAGT-GATCTGCCCCTTGCTGAATGGCACTAGGGTCATTTCTCTGTCTCTAGCT------------CCAGGCACAAAGCCAGCCCTCAGCA-GCGACTCTGATGCTGTCTCCCTGTCCTCGGT-AAGGCCCTTCCCACCCAAGAGCGCAGAGACCATGGGCCAGCAGGCTGAGAAGCAACCTTTAGTTATGTCACCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 477960 274 + 17725628 CCCTCCTCCCGGCCCCTGG-----------------------------------------------------------------TCCACGTCCCTGAGGCATTTTCCATTGTGTGTGCTTATATCCCAGAACGAATCCTCTAACTGCCTCTACCA-GATAGT-GATCTGTCCCTTGCTGAATGGCACTGGGCTCATTTCTCTGTCTCCAGCT------------CCATGCACAAAGCCCGCCTACA-CA-GCGACTCTGATGCAGTCTCCCTGTCCTCGGGAAAGGCCCTTCCCACCCAAGAGAGCAGAGACCATGGGCCAGCAGGCTGAGAAGGAACCTTTAGTTATGTCACCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 442838 264 - 6778120 CCCTCCTCCCCGCCCCTGG-----------------------------------------------------------------TCCACGT--------CGTTTTCCACTGTGTGCGCTTATACCCCGGGACTAATCCTCAAACTGCCTCTACCA-GACAGC-GATCTGTCCCTTGCTGAATGGCACTGGGCTCATTTCTCT-TCTCCAGCT------------CCATGCACAAAGCCAGCCCTCAGCA-GCGACTCTGATGCTGTCTCCCCGTCCTCGGT-GAGGCCCTT-CCACCCAAGAGAGCAGAGACCATGGGCCCGCAGGCTGAGAAGGAACCTTTAGTTATGTCACCC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433484 352 - 608964 CCCTCCTCCCTGCCTGGGGTACCCACCCTCCCCTGGCTCCTATTTACTCCGGCCAGGCAGCCTCCTGTTCACTTTGAGCCCACCTCCACATCCCTTAGGGACTTTCCATTGTGCCTATTTAACACCTGGGCTTATTCCCCCAACTTTATCTATTAGGACAGTTGACCTGGCCCTTGCTGAATGGCACTGGGATCGTTTCTCTACTTTCAGAACTTAGCCCAGT-CCATGTACAATGCCAGCCCTCATTACCCAATTATAGTACTGTCTCACTATCCCCCGC--AGGCCCTTCCCACCTGAGACGGCAGAGAGTGTGAGCAGGCAGGCTGAGACTGACTATTCAGTGACATCTCCC i otoGar3.GL873829 I 2 I 110 s canFam3.chr33 29084045 339 + 31377067 CCCTCTTGCCTCCTTGGGATGCTTCTCCTTCTCCAGCTCCTATTCATTCTTTCCAGGAAGCCGCCTCTTCGCCTTGAGCATACCCCGACCTCCCCTGGG-ACCTTCCATTGTGT---CTAATACCCTGCATTTATTCCTCTAATCGCACCTATCAAGGCAGCAGGTCCGTCTCTTACTAAACAGTACCGTGGTCACTTCTCT----CCACCTCCCAGCCTGGTGCCATGTACAGAGCCAGCCCTCCGCACCCAACTCTGATGCTGTCCCATAGCCCACTGT--GGGAGTTGACGACCCGAGAGAGT-----CTATGAGCAGGCGGGCTGAGACG-AGTCTTCAGTTCCATCTCCC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M a score=618075.000000 s hg38.chr3_KI270779v1_alt 150072 100 + 205312 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTCACCTGTATGGC----CTCACCTCTCTCAGG------CAGGATG------GGGATGGGGGCAGCTGTGGAGCG-GGTGTGCATGGCAGTGCTGGGAATG s panTro5.chr3 200142619 100 + 202621043 ATCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTGGCCTGTATGGC----CTCACCTTTCTCAGG------CAGGATG------GGGATGGGGGCAGCTGTGGAGCG-GGTGTGCATGGCAGTGCTGGGAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109759 100 + 190779 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTGGCCTGTATGGC----CTCACCTTTCTCAGG------CAGGATG------GGGATGGGGGCAGCTGTGGAGCG-GGTGTGCATGGCAGTGCTGGGAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55436 100 - 55620 CTCAA----------------------------AAGC----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTCGCCTGTATGGC----CTCACCTTTCTCAGG------CAGGATG------GGGATGGGGGCAGCTGTGGAGCG-GGTGTGCATGGCAGTGCTGGGAGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120909120 104 + 123690457 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTCGCCTGTATGGCCTGACTCACCTTTCTCAGG------CGGGATG------GGGATGGGGGCGGCTGTGGAGCG-GGTGTGCGTGGCAGTGCTGGGAGCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202485972 116 + 204787373 CCCAA----------------------------AACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------AGTCTCACCTGTACGGCCTCACTCACCTGTCTCAGGCGGGACGGGGACGGGGGCAGGGGCGGGGGCAGCTGTGGAGCG-GCTGTGCGTGGCAGTGCTGGGAGTG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 569688 110 + 19675229 CCCAA----------------------------AACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------AGTCTCACCTGTACGGCCTCACTCACCTTTCTCAGGCGGGACGGGGACG------GGGGCGGGGGCGGCTGTGGAGCG-GCTGTGCCTGGCAGTGCtgggagtg i macNem1.NW_012014355v1 C 0 I 39 s cerAty1.NW_012004056v1 505910 110 + 16847902 CTCAA----------------------------AACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------TGTCTCACCTGTACGGCCTCACTCACCTTTCTCAGGCTGGACCGGGACG------GGGGCGGGGGCGGCTGTGGAGCG-GGTGTGCATGGCAGTGCTGGGAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433586 104 - 91754291 CTCAA----------------------------AACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------TGTCTCACCTGCACGGCCTCACTCACCTTTCTCAGA------CGGGACG------GGGACGGGGGCAGCTGTGGAGCG-GGTGTGCGTGGCAGTGCTGGGAGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611678 110 - 1977891 CTCAA----------------------------AACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------TGTCTCACCTGTACGGCCTCACTCACCTTTCTCAGGCTGGACCGGGACG------GGGGCGGGGGCGGCTGTGGAGCG-GGTGTGCATGGCAGTGCTGGGAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474436 104 + 7796314 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CACG---------------------------------GGTCTCACCTGTACGGCCTCACTCACCTTTCTCAGG------CGGGACG------GGGATGGGGGCGGCTGTGGAGCG-GCTGTGGGTGGCAGTGCTGGGAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956158 104 - 74750902 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CATG---------------------------------GGGCACACCTCTACAGCATGACTCACCTTTCTCAGA------CGGGATG------GGGACGGGGGCAGCTGTGGATCG-GGTGTCTGTGGAAGTGTTGGGAATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478234 104 + 17725628 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CATG---------------------------------GGGCACACCTCCACGGCATGACTCACCTTTCCCAGA------TGGGATG------GGGACGGGGGCAGCTGTGGATCG-GGTGTCTGTGGAAGTGTTGGGAATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443102 89 - 6778120 CTCAA----------------------------AAGG----------------------------------------------------------------------------------------------------------------------------------CGTG---------------------------------GGGCACACCCCTATGGCATGACTCACCTTTCTCAGA------CGGGATG------GGGACGGGGGCAGCTGTGGAT----------------GTGTTGGGAATG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 433946 132 - 608964 CTCAACGCTCACCTCCACAGCCAGCTCCACTGCAGGG----------------------------------------------------------------------------------------------------------------------------------CAGG---------------------------------GGTCTCACTGCTGCTGCACCACTCACCTCTCCCGGG------CTGGATA------GGGACTGGGACAGCTGTTGACTG-GCTGCCCGTGGACGTGCTAGGGGTG i otoGar3.GL873829 I 110 C 0 s canFam3.chr33 29084384 264 + 31377067 CTCTA----------------------------AAGGGGGTAGGGGAGCAGCTGGACTACCGATGGCCCAGAGGAGGCAGCACACATACCCACAGAACCAGCTCCCCCTGCTCCCCCAAAAGAGCCCTCACTGGTAGATCTAATCGAGCTGCCAAAACTACAGCATCCACATCTAGCTCAGATCTCTATATCCCAGAGTGGAGGGACCCCACCTCTCCAGGGACATTTACCTTTCTCTGG------CTTGATG------GGGACTGGGGCAGCCGTTGAGTGTGCCGTGGATG---CTGCTGGAGGG- i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e macFas5.chr2 83084 14732 + 192460366 M a score=5988.000000 s hg38.chr3_KI270779v1_alt 150172 2 + 205312 -GT s panTro5.chr3 200142719 2 + 202621043 -GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109859 2 + 190779 -GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55536 2 - 55620 -GT i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120909224 2 + 123690457 -GC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202486088 2 + 204787373 -GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98034 2 + 192460366 -GT i macFas5.chr2 M 14732 C 0 s macNem1.NW_012014355v1 569837 2 + 19675229 -gg i macNem1.NW_012014355v1 I 39 C 0 s cerAty1.NW_012004056v1 506020 2 + 16847902 -GC i cerAty1.NW_012004056v1 C 0 I 45 s chlSab2.chr15 433690 2 - 91754291 -GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611788 2 - 1977891 -GC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474540 2 + 7796314 -GC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956262 2 - 74750902 -GC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478338 2 + 17725628 -GC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443191 2 - 6778120 -GC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 434078 2 - 608964 -GA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084648 2 + 31377067 AG- i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I a score=48895.000000 s hg38.chr3_KI270779v1_alt 150174 8 + 205312 GGAAATGA s panTro5.chr3 200142721 8 + 202621043 GGAAATGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109861 8 + 190779 GGAAATGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55538 8 - 55620 GGAAATGA i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120909226 8 + 123690457 GGAAATGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202486090 8 + 204787373 GGAGGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98036 8 + 192460366 GGCTGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 569839 8 + 19675229 ggctgtgg i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 433692 8 - 91754291 GGAGGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611790 8 - 1977891 AGAGGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474542 8 + 7796314 GGAGGTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956264 8 - 74750902 GGAGGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478340 8 + 17725628 GGAGGTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443193 8 - 6778120 GGAGGTGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 434080 5 - 608964 ---GGTGA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084650 8 + 31377067 AGTAGTGA i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3910611 1352 + 6579706 I e cerAty1.NW_012004056v1 506022 45 + 16847902 I a score=-2642.000000 s hg38.chr3_KI270779v1_alt 150182 1 + 205312 T s panTro5.chr3 200142729 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109869 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55546 1 - 55620 T i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120909234 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202486098 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98044 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 569847 1 + 19675229 c i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 433700 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611798 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474550 1 + 7796314 C i colAng1.NW_012118932v1 C 0 I 39 s calJac3.chr17 956272 1 - 74750902 T i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478348 1 + 17725628 T i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443201 1 - 6778120 T i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 434085 1 - 608964 G i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 29084658 1 + 31377067 G i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3911963 1 + 6579706 T i dasNov3.JH569502 I 1352 C 0 e mm10.chr16 65449197 1915 - 98207768 I e cerAty1.NW_012004056v1 506022 45 + 16847902 I a score=280453.000000 s hg38.chr3_KI270779v1_alt 150183 37 + 205312 GGTCTGGGAGGTTGTGGGG---------------------------------------------------------------------------------------GGTGGTGATGTGGCTGTG s panTro5.chr3 200142730 37 + 202621043 GGTCTGGGAGGTTGTGGGG---------------------------------------------------------------------------------------GGTGGTGATGTGGCTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109870 37 + 190779 GGTCTGGGAGGTTGTGGGG---------------------------------------------------------------------------------------GGTGCTGATGTGGCTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55547 37 - 55620 GGTCTCGGAGGTTGTGGGG---------------------------------------------------------------------------------------GGTGGTGATGTGGCTGTG i gorGor5.CYUI01001831v1 C 0 C 0 s nomLeu3.chr11 120909235 37 + 123690457 GGTCTGGGAGGTTGTGGGG---------------------------------------------------------------------------------------GGTGGGGATGTGGCTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202486099 37 + 204787373 GGCCTGGGAGGTGGTCAGG---------------------------------------------------------------------------------------GGTGGTGAGGGGGCTGTG i rheMac8.chr2 C 0 I 4989 s macFas5.chr2 98045 37 + 192460366 GGTCTTGGAGGTTGTTGGG---------------------------------------------------------------------------------------GGTAGTGATGTGACTCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 569848 37 + 19675229 ggtctgggaggttgttggg---------------------------------------------------------------------------------------ggtAGTGATGTGACTCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506067 37 + 16847902 GGTCTGGGAGGTTGTTGGG---------------------------------------------------------------------------------------GGTAGTGATGTGACTCGG i cerAty1.NW_012004056v1 I 45 C 0 s chlSab2.chr15 433701 124 - 91754291 GGCCTGGGAGGTGGTCGGGGGTGGGGATGGGGCTGTGGTGGAGGTGGCGGTCTCAGAGGTCGTTGGGGGTGTGGATGTGGCTGTGGCGGTCTGGGAGGTGGTCGGGGGTAGTGAGGTGACTCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611799 73 - 1977891 GGCCTGGGAGGTGGTCGGG---GGGGATGGGGCTGTGGCGGTCTTGGAGGTT------------------------------------------------GCTGGGGGTAGTGATGTGACTCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474590 37 + 7796314 GGTCTGGGAGGTTGTTGGG---------------------------------------------------------------------------------------GGTAGTGATGTGACTCTG i colAng1.NW_012118932v1 I 39 C 0 s calJac3.chr17 956273 37 - 74750902 GGTTCGGGAGGTTGTTGGG---------------------------------------------------------------------------------------GGCAGTGATGCGGCCGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478349 37 + 17725628 GGTTCGGGAGGTTGTTGGG---------------------------------------------------------------------------------------GGCAGTGATGCGGCTGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443202 37 - 6778120 GGTTCGGGAGGCCGCTGGG---------------------------------------------------------------------------------------GGCAGTGATGCGGCTGTG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 434089 37 - 608964 GGTCTGGGAGGTTGTGGAG---------------------------------------------------------------------------------------GGTAGTGATGTTGCTGTG i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 29084659 37 + 31377067 CGTCCGCGAGGTTGTTGAA---------------------------------------------------------------------------------------GATAGTGATGTTGTTGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3911964 37 + 6579706 GGTTTGGCTGGTTGCGGTG---------------------------------------------------------------------------------------GATGGCGATGTGGATGTG i dasNov3.JH569502 C 0 I 736 e mm10.chr16 65449197 1915 - 98207768 I a score=209311.000000 s hg38.chr3_KI270779v1_alt 150220 33 + 205312 CGTCTCCCACCGTCTGTCTTCAGTGACGGTGTT s panTro5.chr3 200142767 33 + 202621043 TGTCTCCCACCGTCTGTCTTCAGTGATGGTGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109907 33 + 190779 TGTCTCCCACCGTCTGTCTTCAGTGATGGTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01001831v1 55584 33 - 55620 CGTCTCCCACCGTCTGTCTTCAGTGACGGTGTT i gorGor5.CYUI01001831v1 C 0 N 0 s nomLeu3.chr11 120909272 33 + 123690457 CGTCCCCCACCGTCTGTCTTCAGTGACGGTGTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98082 33 + 192460366 TGACTCTCGCTGCTTGTCTTCACTGAGGTTGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 569885 33 + 19675229 CCACTCTCGCTGCTTGTCTTCACTGAGGTTGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506104 33 + 16847902 CCACTCTCGCTGCCTGTCTTCACTGAGGTTGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433825 33 - 91754291 CCACTCTCGCTGCCTGTCTTCACTGACGTTGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611872 33 - 1977891 CCACTCTCGCTGCCTGTCTTCACTGAGGTTGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474627 33 + 7796314 CCTCTCCCACCATCTGTCTTCACTGAAGGTGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956310 33 - 74750902 CTTCTCCCAGTGTCGGTCTTCAGGGAGGGTGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478386 33 + 17725628 TTCCTCCCACTGTCTGTCTTAAGGGAGGGTGTC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443239 33 - 6778120 CTTCTCCCACGGTCTGTCTTCAGGGAGGCTGTC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 434126 33 - 608964 CTTCTCCCACTGTCAGTCCTCAGTGGGGCTGTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084696 33 + 31377067 CTACTCTGGCTGCCTATCGCCAGGGAAGTTACC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e rheMac8.chr2 202486136 4989 + 204787373 I a score=7085.000000 s hg38.chr3_KI270779v1_alt 150253 1 + 205312 G s panTro5.chr3 200142800 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109940 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909305 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98115 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 569918 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506137 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433858 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611905 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474660 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956343 1 - 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478419 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443272 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 434159 1 - 608964 G i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084729 1 + 31377067 G i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e rheMac8.chr2 202486136 4989 + 204787373 I a score=882178.000000 s hg38.chr3_KI270779v1_alt 150254 106 + 205312 TCATTCCTGGACACGTGAAAAGACAAGGC-GGGGTGTTTCTTACAGTAACAAAACAGGAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAA s panTro5.chr3 200142801 107 + 202621043 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGTTTCTTACAGTAACGAAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGAAAGAGAGAGCTGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 109941 107 + 190779 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGTTTCTTACAGTAACGAAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGAAAGAGAGAGCTGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909306 107 + 123690457 TCATCCCGGGACAGGTGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCGAAGAGATTCAAAGAAATCAGGAGGTGGAAGAGAGAGCTGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491125 107 + 204787373 TCATTCCTGGACACATGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGTTGGAA i rheMac8.chr2 I 4989 C 0 s macFas5.chr2 98116 107 + 192460366 TCATTCCTGGACACATGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGTTGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 569919 107 + 19675229 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506138 107 + 16847902 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433859 106 - 91754291 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAG-GAGCTGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 611906 107 - 1977891 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474661 107 + 7796314 TCATTCCTGGACACGTGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGTTGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956344 102 - 74750902 TCATTCCTGGACATGTGAACAGAGAAGGCAGGGGTGGCTCTTACAGT---AGAACAGCAGAGTTAGAGAGATTCAGAGAAATCAGGAGCTGGA--AGAGAGCTAGAA i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 478420 107 + 17725628 TCATTCCTGGACATGTGAACAGAGAAGACAGGGGTGGTTCTTACAGTCAGAGAACAGCAGAGTCAGAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTAGAA i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 443273 106 - 6778120 TCATTCCTGGACATGGGGACAGAGAAAGC-GGGGTGGTTCTTACAGTAAGAGAACCGCAGAGTCAGAGAGAGTCAAGGAAATCAGGAGCTGGAAGAGAGAGCTAGAA i cebCap1.NW_016107444v1 C 0 I 379 s otoGar3.GL873829 434160 101 - 608964 TCCTTGCTGTCCAGGCAGGGAGTGAGGACAGGAGTAGGTTGTACAGTAAGAGAACAGGAGAGC----GAGATTCAGAGAAGTCAGAAGCTGGA--AGAGAGCTAGAA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29084730 90 + 31377067 TGGTTCCTGGGCATAT-AGGAGAGAAGATTGCAGTGGGTCTTATTATCTGAAAGTAGCA------AACAGTGTCACAGATTTCAGGAGATGGAAGAA---------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I a score=260845.000000 s hg38.chr3_KI270779v1_alt 150360 39 + 205312 ACTC-CTTG----TCTCTCCCCTGCTCATATCCAAACTACTCTC s panTro5.chr3 200142908 39 + 202621043 ACTC-CTTG----TCTCTCCTCTGCTCATATCCAAACTACTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110048 39 + 190779 ACTC-CTTG----TCTCTCCCCTGCTCATATCCAAACTACTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909413 39 + 123690457 ACTC-CTTG----TCTATCCGCTGGTCATATCCAGACTACTTTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491232 39 + 204787373 ACTC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98223 39 + 192460366 ACTC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 570026 39 + 19675229 AATC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506245 39 + 16847902 ACTC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 433965 39 - 91754291 ACTC-CGTG----TCTGTCCGCTGGTCATATCCAAACCACTCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612013 39 - 1977891 ACTC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474768 39 + 7796314 ACTC-CTTG----TCTATCCGCTGGTCACATCCAAACCACTCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956447 43 - 74750902 CCTC-CTTGTCCATCTGTCTACTGGTCACGTCCAAGGCACTCTC i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 478528 43 + 17725628 CCTC-CTTGTCTATCTACCTACTGGTCATATCCAAACCACTCTC i saiBol1.JH378146 I 1 I 308 s otoGar3.GL873829 434262 38 - 608964 CCTT-CTTG----TGTG-CTGCTAGTTGCACCCAAACCACTCCC i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29084820 40 + 31377067 ACTCTCTCA----TCCATCTTCTGCTCAAACCCAAACTGCTCCC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e cebCap1.NW_016107444v1 443379 379 - 6778120 I a score=49035.000000 s hg38.chr3_KI270779v1_alt 150399 11 + 205312 GACATCAGTGC- s panTro5.chr3 200142947 11 + 202621043 GACATCAGTGC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110087 11 + 190779 GACATCAGTGC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909452 11 + 123690457 GACATCAGTGG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491271 11 + 204787373 GACATCAGCGG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98262 11 + 192460366 GATATCAGCAG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 570065 11 + 19675229 GACATCAGCGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506284 11 + 16847902 GATATCAGCGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434004 11 - 91754291 GACATCAGCGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612052 11 - 1977891 AATATCAGCGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474807 11 + 7796314 GACATCAGCGG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956490 11 - 74750902 CACATAAGAGG- i calJac3.chr17 C 0 I 303 s saiBol1.JH378146 478879 11 + 17725628 GACACAAGCAC- i saiBol1.JH378146 I 308 C 0 s otoGar3.GL873829 434300 11 - 608964 TACACAAGCAG- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084860 12 + 31377067 GACAATAAGAAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e cebCap1.NW_016107444v1 443379 379 - 6778120 I a score=105388.000000 s hg38.chr3_KI270779v1_alt 150410 18 + 205312 TTTTCGATTGCGGCACAA s panTro5.chr3 200142958 18 + 202621043 TTTTCGATTGGGGCACAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110098 18 + 190779 TTTTCGATTGGGGCACAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909463 18 + 123690457 TTTTCGATTGGGGCACAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491282 18 + 204787373 TTTTCGACTGGGGCAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98273 18 + 192460366 TTTTCGACTGGGGCAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 570076 18 + 19675229 TTTTCAACTGGGGCAGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506295 18 + 16847902 TTTTCGACTGGGGCAGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434015 16 - 91754291 GTTTCGACTGGGGC--AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612063 18 - 1977891 TTTTCGACTGGGGCAGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474818 18 + 7796314 TTTTCGACTGGGGCAGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956804 18 - 74750902 TTTTCTACGGGGGCAGGG i calJac3.chr17 I 303 C 0 s saiBol1.JH378146 478890 18 + 17725628 TTTTCTATGGGGGCAGGG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 434311 18 - 608964 GTTTCTGCTAGGGCAGAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084872 18 + 31377067 CAGTCCTCTGGGGTAGAG i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e cebCap1.NW_016107444v1 443379 379 - 6778120 I a score=188460.000000 s hg38.chr3_KI270779v1_alt 150428 24 + 205312 AGGAGGGTGAGCCTGTCACCCACC s panTro5.chr3 200142976 24 + 202621043 AGGAGGGTGAGCCTGTCACCCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110116 24 + 190779 AGGAGGGTGAGCCTGTCACCCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909481 24 + 123690457 AGGAGAGTGAGCCTGTCACCCACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491300 24 + 204787373 AGTGGGGTGAGCCTGTCACCCACC i rheMac8.chr2 C 0 I 147 s macFas5.chr2 98291 24 + 192460366 AGTGGGGTGAGCCTGTCACCCACC i macFas5.chr2 C 0 I 147 s macNem1.NW_012014355v1 570094 24 + 19675229 AGTGGGGTGAGCCTGTCACCCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506313 24 + 16847902 AGTGGGGTGAGCCTGTCACCCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434031 24 - 91754291 AGTGGGGTAAGCCTGTCGCCCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612081 24 - 1977891 AGTGGGGTGAGCCTGTCACCCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474836 24 + 7796314 AGTGGGGTGAGCCTGTCACCCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956822 22 - 74750902 AGGAGGGTG-GCCTGTCACCC-CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478908 23 + 17725628 AGGAGGGTG-GCCTGTCGCCCACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443758 23 - 6778120 AGGAGGGTG-GCCTGTCACCCACC i cebCap1.NW_016107444v1 I 379 C 0 s otoGar3.GL873829 434329 23 - 608964 -GGGATGGGGACCTATCACCCATC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084890 24 + 31377067 TGGATGGTCCGCCTGTCACTCTCC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I a score=369095.000000 s hg38.chr3_KI270779v1_alt 150452 48 + 205312 ACACCCA---T---CACCTCCTCCCCT-GTGGGACCTGACACGGCCCCACCAGGT s panTro5.chr3 200143000 48 + 202621043 ACACCCA---T---CACCTCCTCCCCT-GTGGGACCTGACTCAGCCCCACCAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110140 48 + 190779 ACACCCA---T---CACCTCCTCCCCT-GTGGGACCTGACTCAGCCCCACCAGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909505 48 + 123690457 ACACCCA---T---CGCCTCCTCCCCT-GTGGGACCTGACTCAGCCACACCAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491471 48 + 204787373 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTGACTCAGTCCCACCGGAT i rheMac8.chr2 I 147 C 0 s macFas5.chr2 98462 48 + 192460366 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTGACTCAGTCCCACCGGAT i macFas5.chr2 I 147 C 0 s macNem1.NW_012014355v1 570118 48 + 19675229 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTGACTCAGTCCCACCGGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506337 48 + 16847902 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTTACTCAGTCCCACCAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434055 48 - 91754291 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTGACTCAGTCCCACCGGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612105 48 - 1977891 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTGACTCAGTCCCACCAGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474860 48 + 7796314 ACACCCA---T---CACCTCCTCCTCT-GTGGGACCTGACTCAGTCCCACCAGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956844 48 - 74750902 ACACCCA---T---CGCCTCCTCCTCT-GTGGGCCCTAACCCGGCCCCACCAGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478931 48 + 17725628 ACACCCA---T---GGCTGCCTCCTCT-GTGGGACCTAACTCAGCCCCACCAGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 443781 48 - 6778120 ACACCCA---T---CGCCTCCTGTGCT-GTGGGACCTAACACAGCCCCACCAGGT i cebCap1.NW_016107444v1 C 0 I 126 s otoGar3.GL873829 434352 49 - 608964 ACACCCC---TACCCACTTCATCCTCTGGTAGAACCTAACCC---CTAGCTGGGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084914 43 + 31377067 ACACTCGCACT---CAATTCGTCTTCTAGTGGAACTGCCCTCAAAC--------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I a score=811312.000000 s hg38.chr3_KI270779v1_alt 150500 134 + 205312 AATGCGAATGCA-CCAGTGTT-CTCAGGTACTCCT-TAGGCTGAAT------------TCCGCCAA-GGGGCCCACTGGGAGACATAAAGG--CGAGGCAGTTGGCAGCTACCTGATGTTTCCATCTTCAGAGGGGAGTCCGAGGATACTGT s panTro5.chr3 200143048 134 + 202621043 AATGCGAATGCA-CCAGTGAT-CTCAGGTACTCCT-TAGGCTGAAT------------TCCGCCAA-GGGGCCCACTGGGAGAGATAAAGA--CCAGGCAGATGGCAGCTACCTGATGTTTCCATCTTCAGAGGGGAGTCCGAGGATACTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110188 134 + 190779 AATGCGAATGCA-CCAGTGTT-CTCAGGTACTCCT-TAGGCTGAAT------------TCCGCCAA-GGGGCCCACTGGGAGAGATAAAGA--CCAGGCAGATGGCAGCTACCTGATGTTTCCATCTTCAGAGGGGAGTCCGAGGATACTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909553 134 + 123690457 AATGCGAATGCA-CCAGTGTT-CTCAGGTACTCCT-GAGGCTGAAT------------TCCACCAA-GGGGCCCACTGGGAGAGATGAAGA--CGAGGCAGATGGCAGTTACCTGATGTTTCCTTCTTCAGAGGGGAGCCCGAGGATGCTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491519 134 + 204787373 AATGTGAATGCG-CCAGTGTT-CTCAAGTACTCCT-TAGGCTGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGATGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGTGGAGCCCGAGGATACTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98510 134 + 192460366 AATGTGAATGTG-CCAGTGTT-CTCAAGTACTCCT-TAGGCTGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGATGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGTGGAGCCCGAGGATACTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 570166 134 + 19675229 AACGTGAATGCG-CCAGTGTT-CTCAAGTACTCCT-TAGGCTGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATACTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506385 134 + 16847902 AATGTGAATGCG-CCAGTGTT-CTCAAGTACTCGT-TAGGCTGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATACTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434103 134 - 91754291 ACTGTGAATGCG-CCAGTGTT-CTCCAGTACTCCT-TAGGCCGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATACTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612153 134 - 1977891 AATGTGAATGCG-CCAGTGTT-CTCAAGTACTCGT-TAGGCTGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATACTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 474908 134 + 7796314 AATGTGAATGCA-CCAGTGTT-CTCAAGTACTCCT-TAGGCTGAAT------------TCAGCCAA-GGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATACTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 956892 126 - 74750902 ------AATTCA-CCAGTGCT-GGCAAGCACTC----AGGCTGGAT------------TGAACCTAGGGGGGTCAGTGGGAGAGACGAAGG--CAAGGAAGGGGGCCGCTACCAGGTGCTTCCGTCTTCCGAGCTGCGCCCGAGGACACTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 478979 136 + 17725628 ------AATTCA-CCAATGCT-CTCAAG-GCTG----AGACTCCTTGGTGCCTTCCCCTGAACCCA-GGGGGTCACTGGGAGAGACCAAGG--CAAGGAAGGGGGCAGCTACCAGGTGTTTCCGTCATCAGAGCTGGCCCCGAGGACACTGT i saiBol1.JH378146 C 0 T 4 s otoGar3.GL873829 434401 115 - 608964 GATGCTAATTTAGCTAGT---------------TT-AAGGCTGGAT------------CCAGCCAG-TGGGGCCACTATAAG------AAG--AAAGGGACATTCCACCTACCTGAAGTCGCGGTCCTTACAGAGGAGGCTGAAGATGCTGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29084957 136 + 31377067 TAGGCGAACGCA-CCATCATCGCTCAAGCCCTCCTCTAGGTCGAAC------------TGAACGAA-TGAGGCCACAGTGAGAGACAAATATCCCGGACTCCCGGC--CTACCTGACGTCTGAGTGCTCAGAGTGCGGCTGGAGAATGCTGT i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I a score=17881.000000 s hg38.chr3_KI270779v1_alt 150634 3 + 205312 GGA s panTro5.chr3 200143182 3 + 202621043 GGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110322 3 + 190779 GGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909687 3 + 123690457 AGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491653 3 + 204787373 GGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98644 3 + 192460366 GGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 570300 3 + 19675229 GGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 506519 3 + 16847902 GGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434237 3 - 91754291 GGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612287 3 - 1977891 GGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 475042 3 + 7796314 GGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 957018 3 - 74750902 GGG i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 434516 3 - 608964 GGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29085093 3 + 31377067 TGA i canFam3.chr33 C 0 I 123 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e saiBol1.JH378146 479115 4 + 17725628 T a score=219215.000000 s hg38.chr3_KI270779v1_alt 150637 46 + 205312 AGCTGAGGTAGCACTGCTGACAGCAAGAGGGGTGGCGTGACCTGTG s panTro5.chr3 200143185 46 + 202621043 AGCTGAGGTAGCACTGCTGAGAGGAACAGGGGTGGTGTCACCTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110325 46 + 190779 AGCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCACCTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909690 46 + 123690457 TGCTGAGGAAGTGCTTCTGACAGGAAGAGAGGTGCTGTGACCTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491656 46 + 204787373 TGCTGGGAAAGCACTGGTGACAGGAAGAGTGGTAGCGTGACCTGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98647 46 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 570303 46 + 19675229 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTG i macNem1.NW_012014355v1 C 0 I 620 s cerAty1.NW_012004056v1 506522 46 + 16847902 TGCTGAGGATGCGCTGCTGACGGCAAGAGGCGTGGCATGACCTGTG i cerAty1.NW_012004056v1 C 0 I 620 s chlSab2.chr15 434240 46 - 91754291 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTG i chlSab2.chr15 C 0 I 620 s manLeu1.NW_012102020v1 612290 46 - 1977891 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTG i manLeu1.NW_012102020v1 C 0 I 620 s colAng1.NW_012118932v1 475045 46 + 7796314 TGCTGAGGAAGCGCTGGTGACAGCAAGAGGGGTGGCATGACCTGTG i colAng1.NW_012118932v1 C 0 I 620 s calJac3.chr17 957021 46 - 74750902 TGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTG i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 434519 46 - 608964 TGGCGTGGACATGCTGGTAGCAGAGAGAGGAGGAGTGTAACCTGTG i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e saiBol1.JH378146 479115 4 + 17725628 T a score=3356.000000 s hg38.chr3_KI270779v1_alt 150683 2 + 205312 GA s panTro5.chr3 200143231 2 + 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110371 2 + 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909736 2 + 123690457 GA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491702 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98693 2 + 192460366 AA i macFas5.chr2 C 0 C 0 s calJac3.chr17 957067 2 - 74750902 GA i calJac3.chr17 C 0 T 55 s otoGar3.GL873829 434565 2 - 608964 AA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e saiBol1.JH378146 479115 4 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I a score=1911.000000 s hg38.chr3_KI270779v1_alt 150685 1 + 205312 T s panTro5.chr3 200143233 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110373 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909738 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491704 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 s otoGar3.GL873829 434567 1 - 608964 T i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479115 4 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I a score=187.000000 s hg38.chr3_KI270779v1_alt 150686 1 + 205312 A s panTro5.chr3 200143234 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909739 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202491705 1 + 204787373 A i rheMac8.chr2 C 0 I 5328 e otoGar3.GL873829 434568 0 - 608964 C e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479115 4 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T a score=27435.000000 s hg38.chr3_KI270779v1_alt 150687 59 + 205312 CTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTG s panTro5.chr3 200143235 59 + 202621043 CCGAGGAAGCGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTAGATACTGAGGAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 59 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909740 59 + 123690457 CTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGTG i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 434568 51 - 608964 --------GGGGTGCTGGAACTCCATGTGACGGCTGGACCAGGGGCTGATGAGAGAATG i otoGar3.GL873829 C 0 M 19127 e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479115 4 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=12972.000000 s hg38.chr3_KI270779v1_alt 150746 28 + 205312 TCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200143294 28 + 202621043 TCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110434 28 + 190779 CTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909799 28 + 123690457 CTGGTGACAGGAAGAGAGGTGCTGTGAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479115 4 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=42432.000000 s hg38.chr3_KI270779v1_alt 150774 56 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGCGTGGCGTGACCTGTGGAC s panTro5.chr3 200143322 56 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 56 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909827 56 + 123690457 CTGTGGATGCTGAGGAAGCGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGAT i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 479111 56 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAAC i saiBol1.JH378146 T 4 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=11314.000000 s hg38.chr3_KI270779v1_alt 150830 25 + 205312 ACTGAGGAAGCGTCGGTGACAGGAA s panTro5.chr3 200143378 25 + 202621043 GGTGAGGAAGCATCGGTGACAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110518 25 + 190779 ACTGAGGAAATGTCGGTGACAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909883 25 + 123690457 GCTGAGGAAGCGCTGGTGACAGGAA i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912001 736 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=10579.000000 s hg38.chr3_KI270779v1_alt 150855 15 + 205312 GAGGGGTGGCGTGAC s panTro5.chr3 200143403 15 + 202621043 GAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110543 15 + 190779 GAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909908 15 + 123690457 GAGAGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 3912737 15 + 6579706 GAGGGAAGGCGTGGC i dasNov3.JH569502 I 736 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=61319.000000 s hg38.chr3_KI270779v1_alt 150870 55 + 205312 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200143418 55 + 202621043 CTGTGGATACTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 55 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909923 55 + 123690457 CTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGGGGTGGCCTGTGGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 957014 55 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 T 55 T 55 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 56 T 55 s dasNov3.JH569502 3912752 49 + 6579706 TTGTGGTGGGTTGTGAAGTGCTGGTGTCGGCA---GGGGTCATGGGAGTGGT--- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=422.000000 s hg38.chr3_KI270779v1_alt 150925 1 + 205312 T s panTro5.chr3 200143473 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110613 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909978 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 3912801 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=16908.000000 s hg38.chr3_KI270779v1_alt 150926 40 + 205312 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGACGTGAC s panTro5.chr3 200143474 40 + 202621043 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCAAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 40 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120909979 40 + 123690457 TCTGAGGAAGCGCTGGTGACAGGAAGAGAGGTGATGTGAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=38726.000000 s hg38.chr3_KI270779v1_alt 150966 55 + 205312 CTGTAGATACTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA s panTro5.chr3 200143514 55 + 202621043 CTGTGGATACTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 55 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910019 55 + 123690457 CTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAAGTGATGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=16108.000000 s hg38.chr3_KI270779v1_alt 151021 39 + 205312 TGATGAGGAAGGGCTGGTGACATGAAGAGGGGTGACGTG s panTro5.chr3 200143569 39 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 39 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTG i panPan2.chrUn_NW_014024201v1 C 0 T 96 s nomLeu3.chr11 120910074 39 + 123690457 TGCTGAGGAAGTGTCAGTGACAGGAAGAGAAGTGATGTG i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=1146.000000 s hg38.chr3_KI270779v1_alt 151060 2 + 205312 AC s panTro5.chr3 200143608 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110652 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 T 96 C 0 s nomLeu3.chr11 120910113 2 + 123690457 AC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=37476.000000 s hg38.chr3_KI270779v1_alt 151062 55 + 205312 CTGTAGATACTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGA s panTro5.chr3 200143610 55 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 55 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910115 55 + 123690457 CTGTGGATGCTGAGGAAGCACTGGTGACAGGAAGAGAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=82090.000000 s hg38.chr3_KI270779v1_alt 151117 185 + 205312 TGATGAGGAAGGGATGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAAGTGTT-GGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCCGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200143665 185 + 202621043 TACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGGTACTGAGGAAGGGCT-GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 186 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGGCTTCGGGGACAGGAAGAGAGGTGTCATGACCTGTGGATGCTGAGGAAGCGTTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910170 185 + 123690457 TGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGACGTGTC-AGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=42444.000000 s hg38.chr3_KI270779v1_alt 151302 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200143850 55 + 202621043 CTGTGGATACTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110895 55 + 190779 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910355 55 + 123690457 CTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=5322.000000 s hg38.chr3_KI270779v1_alt 151357 11 + 205312 TACTGAGGAAG s panTro5.chr3 200143905 11 + 202621043 TGCTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110950 11 + 190779 TGCTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 481 s nomLeu3.chr11 120910410 11 + 123690457 TGCTGAGGACG i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=36815.000000 s hg38.chr3_KI270779v1_alt 151368 100 + 205312 CGTCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTC s panTro5.chr3 200143916 93 + 202621043 AGATGGTGACAGGAAGAGGGGTGGTGTCACCTGGAG---CTGAGGAAGAGATGGT---AGAGAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAG-GTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110480 100 + 190779 CGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATGCTGAGGAAGCGTC i panPan2.chrUn_NW_014024201v1 T 481 T 240 s nomLeu3.chr11 120910421 100 + 123690457 TGTCAGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAAGTGATGTGACCTGTGGATGCTGAGGAAGCACT i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=12490.000000 s hg38.chr3_KI270779v1_alt 151468 29 + 205312 GCTGACAGGAAGAGAGGTGGTGTGACCTG s panTro5.chr3 200144009 28 + 202621043 GGTGACAGGAA-AGGGGTGGTGTCACCTG i panTro5.chr3 C 0 I 2074 s panPan2.chrUn_NW_014024201v1 110340 29 + 190779 GCTGACAGGAAGAGGGGTGGTGTCACCTG i panPan2.chrUn_NW_014024201v1 T 240 C 0 s nomLeu3.chr11 120910521 29 + 123690457 GGTGACAGGAAGAGAAGTGGTGTGACCTG i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=4405.000000 s hg38.chr3_KI270779v1_alt 151497 22 + 205312 AGGATGCTGAGGAAGGGATGGT s panPan2.chrUn_NW_014024201v1 110369 22 + 190779 TGGATACTGAGGAAGCGTCGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910550 22 + 123690457 TGGATGCTGAGGAAGCGCTGGT i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e panTro5.chr3 200144037 2074 + 202621043 I a score=45266.000000 s hg38.chr3_KI270779v1_alt 151519 99 + 205312 GACAGGAAGAGGCGTGGTGTCACCTGTTGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAGCGTCGGTGAC s panTro5.chr3 200146111 99 + 202621043 GACAGGAAGAGGGGTGGCGTGACCTGTAGATACTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGGGCTGGTGAC i panTro5.chr3 I 2074 T 144 s panPan2.chrUn_NW_014024201v1 110391 99 + 190779 GACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910572 99 + 123690457 GACAGGAAGAGGGGTGATGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGGGGTGGCCTGTGGATTCTGAGGAAGCATCAGTGAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=8592.000000 s hg38.chr3_KI270779v1_alt 151618 20 + 205312 AGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200146066 20 + 202621043 AGGAACAGGGGTGGTGTCAC i panTro5.chr3 T 144 C 0 s panPan2.chrUn_NW_014024201v1 110490 20 + 190779 AGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910671 20 + 123690457 AGGAAGAGAGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=7640.000000 s hg38.chr3_KI270779v1_alt 151638 8 + 205312 CTGTGGAT s panTro5.chr3 200146086 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120910691 8 + 123690457 CTGTGGAT i nomLeu3.chr11 C 0 M 3534 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=20127.000000 s hg38.chr3_KI270779v1_alt 151646 47 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGA s panTro5.chr3 200146094 47 + 202621043 GCCGAGGAAGCGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110518 47 + 190779 ACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10144.000000 s hg38.chr3_KI270779v1_alt 151693 41 + 205312 TGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200146141 41 + 202621043 TACTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110565 41 + 190779 TGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9137.000000 s hg38.chr3_KI270779v1_alt 151734 20 + 205312 CTGTGGATACTGAGGAAAAG s panTro5.chr3 200146182 20 + 202621043 CTGTGGATGCTGAGGAAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 20 + 190779 CTGTGGATGCTGAGGAAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 20 + 17725628 CTGTGGATGCCGAGGAGGTG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3912802 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17503.000000 s hg38.chr3_KI270779v1_alt 151754 35 + 205312 CTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200146202 35 + 202621043 CTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110626 35 + 190779 CTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479131 35 + 17725628 CTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 s dasNov3.JH569502 3912802 34 + 6579706 CCGGTGGAGGGGAGGGTGGTGGGCTCCTCTGAGA- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=36811.000000 s hg38.chr3_KI270779v1_alt 151789 185 + 205312 TACTGAGGAAGTGTCGGTGACAG----GAAGAGGGGTGGCGTGACCGGTGGATGCTGAGGAAGCGCCGGTGACAGGAAGAGTGCTGGTGTCACCTGTGGATGCTGAGGAAGGGAT-GGTGACATGAAGAGGGGTGGTGTGTCCTGTGGATAA------TGAGGAAGC---------ATTGGTGACAGGAAGAGGGGTGGTGTCAC------- s panTro5.chr3 200146237 185 + 202621043 TGGTGAGGAAGCATCGGTGACAG----GAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCT-GGTGACAGGAAGAGGGGTGGCAAGAGCTGTGGATAC------TGAGGAAGC---------ATCGGTGACAGGAAGAGGGGTGGTGTCAC------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110661 186 + 190779 TACTGAGGAAGTGTCCGTGACAG----GAAGAGGGGTGGCCTGACCTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGGCTTCGGGGACAGGAAGAGAGGTGTCATGACCTGTGGATGC------TGAGGAAGC---------GTTGGTGACAGGAAGAGGGGTGGCATGAC------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 3912836 193 + 6579706 ----GAGGAAGTGAGGATG-CAGCTCTGCTGAGAGGC----TCACCGGTAGA-GCTCACGTAG-GTCGGTG-------GTGTACTCGTGTTGGTGGTGGAAGCCCCTGACTGGAC-GGTGACAGGGTGTCTGTTGGTGGGCTTGCTCGACACGCCCGGCGAGGAAGCCGGGACCTGGGTGGTTCCCGTCAAGGAGACGGAGCCAGATCCGAC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21515.000000 s hg38.chr3_KI270779v1_alt 151974 55 + 205312 CTGTGGA--TGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC------------CTGTAGA s panTro5.chr3 200146422 55 + 202621043 CTGTGGA--TACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATGTCAC------------CTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110847 55 + 190779 CTGTGGA--TGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC------------CTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGA--TGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC------------CTGTGAA i saiBol1.JH378146 T 55 T 48 s dasNov3.JH569502 3913029 66 + 6579706 CGGAGGAACGGCCCCGGGATTGCCTTGGGTGGTGACTGGGCTGGTGGGGCTAGCCCCCAATGCTGT--- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22793.000000 s hg38.chr3_KI270779v1_alt 152029 48 + 205312 TGCTGAG-------GAAGGGCTGGTGACA--------------GGAAGAGGGGTGGTGTGACCTGTGGA s panTro5.chr3 200146477 48 + 202621043 TGCTGAG-------GAAGGGCTGGTGACA--------------GGAAGAGACGTGGTGTCACCTCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110902 48 + 190779 TGCTGAG-------GAAGGGCTGGTGACA--------------GGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479118 48 + 17725628 TGCCGAG-------GAGGTGCTGGTCACA--------------GGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 48 T 48 s dasNov3.JH569502 3913095 69 + 6579706 TGCTGGGCCAGCCCCATGGGGTGGCGACGTAGCAGAGGTAGGCGTGGGAGGGAAGGCGTGGCTTGTGGT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3327.000000 s hg38.chr3_KI270779v1_alt 152077 11 + 205312 -TGCTAAGGAAG s panTro5.chr3 200146525 11 + 202621043 -TACTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110950 11 + 190779 -TGCTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 433 s saiBol1.JH378146 479118 11 + 17725628 -TGCCGAGGAGG i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 3913164 11 + 6579706 GGGTTGTGAAG- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12476.000000 s hg38.chr3_KI270779v1_alt 152088 32 + 205312 TGCTGGTGACAGGAACAGGGGTGGCGTGACCG s panTro5.chr3 200146536 32 + 202621043 TGTCGGTGACAGGAAGAGGGGTGGTGTCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110528 32 + 190779 TGTCGGTGACAGGAAGAGAGGTGTCGTGACCT i panPan2.chrUn_NW_014024201v1 T 433 C 0 s saiBol1.JH378146 479129 32 + 17725628 TGCTGGTCACAGGAAGCGGGGTGGCGTGGCCT i saiBol1.JH378146 C 0 T 48 s dasNov3.JH569502 3913175 26 + 6579706 TGCTGGTGTCGG---CAGGGGTCATGGGA--- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5448.000000 s hg38.chr3_KI270779v1_alt 152120 17 + 205312 GTGGATGCTGAGGAAGT s panTro5.chr3 200146568 17 + 202621043 GTGGGTACTGAGGAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110560 17 + 190779 GTGGATGCTGAGGAAGC i panPan2.chrUn_NW_014024201v1 C 0 I 384 s saiBol1.JH378146 479113 17 + 17725628 GTGGATGCCGAGGAGGT i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 3913201 5 + 6579706 GTGGT------------ i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19969.000000 s hg38.chr3_KI270779v1_alt 152137 36 + 205312 GCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200146585 36 + 202621043 GCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110961 36 + 190779 GCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 I 384 C 0 s saiBol1.JH378146 479130 36 + 17725628 GCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 s dasNov3.JH569502 3913206 35 + 6579706 CCCGGTGGAGGGGAGGGCGGTGGGCTCCTCTGAGA- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5945.000000 s hg38.chr3_KI270779v1_alt 152173 30 + 205312 TGCTGAGGAAGGGCTAGTGACAGGAAGAGG s panTro5.chr3 200146621 30 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAAGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110997 30 + 190779 TGCTGAGGAAGGGCTGGTGACAGGAAGAGG i panPan2.chrUn_NW_014024201v1 C 0 T 384 s dasNov3.JH569502 3913241 7 + 6579706 ----GAGGAAG------------------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1480.000000 s hg38.chr3_KI270779v1_alt 152203 11 + 205312 CATGGTGTCAC s panTro5.chr3 200146651 11 + 202621043 GTTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110643 11 + 190779 GGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 384 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913248 0 + 6579706 C e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22683.000000 s hg38.chr3_KI270779v1_alt 152214 55 + 205312 CTGTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA s panTro5.chr3 200146662 55 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 55 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 s dasNov3.JH569502 3913248 45 + 6579706 -TGAGGATGC------AGCTCTGCTGAGAGGCTCACCGGTAGAGCG-CATGTA-- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7790.000000 s hg38.chr3_KI270779v1_alt 152269 41 + 205312 ------TGCCGAGGAAATGTCGGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200146717 41 + 202621043 ------TACTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 41 + 190779 ------TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 T 432 s dasNov3.JH569502 3913293 41 + 6579706 GGTCggtggtgtactggtgttggtggtggaagcggtgttgg------ i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20918.000000 s hg38.chr3_KI270779v1_alt 152310 94 + 205312 CTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAA-GAGGGGTGGCGTGACCTGTGGATAC------TGAGGAAGTGTCGGTGACAGGCACAGGGGTGGTGTC s panTro5.chr3 200146758 95 + 202621043 CTGTGGATGCTGAGGAAGAGATGGTGACAGGAAAGAGGGGTGGTGTCACCTGTGGATGC------TGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110318 94 + 190779 CTGTGGAAGCTGAGGTAGCACTGCTGACAGGAA-GAGGGGTGGTGTCACCTGTGGATAC------TGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTC i panPan2.chrUn_NW_014024201v1 T 432 I 336 s dasNov3.JH569502 3913334 91 + 6579706 tggtggAAGCCCCTGACTGGACAGTGACAGGGT-GTCTGGTGGTGGGCTCACTCGACACGCCCGGCGAGGAAG---------CCAGGACCTGGGTGGTTCC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5595.000000 s hg38.chr3_KI270779v1_alt 152404 20 + 205312 ACCTGT---GGATGCTGAGGAAG s panTro5.chr3 200146853 20 + 202621043 ACCTGT---GGATACTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110748 20 + 190779 ACCTGT---GGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 I 336 T 336 s dasNov3.JH569502 3913425 20 + 6579706 ---CGTCAAGGAGACGGAGCCAG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=32736.000000 s hg38.chr3_KI270779v1_alt 152424 138 + 205312 TCTCGGTGACAAGAAGAGGGGTGG-TGTCACC-TGTGGATGATGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGT-GTCACCTGTGTAT---GCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATGCTG s panTro5.chr3 200146873 138 + 202621043 CGTCGGTGACAGGAAGAGAGGTGG-TGTCACC-TGTGGATACTGAGGAAGCGTCGGTGACAGAAAGAGGGGTGGT-GTCACCTGTGGAT---ACTGAGGGAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110432 138 + 190779 GGCTGGTGACAGGAAGAGGGGTGG-CGTGACC-TGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGC-GTGACCTGTGGAT---ACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATGCTG i panPan2.chrUn_NW_014024201v1 T 336 C 0 s dasNov3.JH569502 3913445 134 + 6579706 ATCCGACCGGAGGAACGGCCGTGGCCGTCACCTTGTCACTGATGTCGGAGGATCTGGGGCTTGGTGGGAGGAATTCCCCACGTGTGGACCAAACTGAAGAAGG---------AGAACGAGAGGTCGTGTCGCTCA-GGGTGCTG i dasNov3.JH569502 C 0 I 1308 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=31097.000000 s hg38.chr3_KI270779v1_alt 152562 132 + 205312 AGGAAGTGTCGGTGACAGGAAGAGAGGTGGCATGACCGGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200147011 132 + 202621043 AGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110570 132 + 190779 AGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23497.000000 s hg38.chr3_KI270779v1_alt 152694 56 + 205312 CTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACC-TGTGGAT s panTro5.chr3 200147143 56 + 202621043 CTGTGGAT-TTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 56 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACC-TGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACC-TGTGAAT i macFas5.chr2 T 56 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3082.000000 s hg38.chr3_KI270779v1_alt 152750 14 + 205312 GCTGAGGAAGGGCT s panTro5.chr3 200147199 14 + 202621043 ACTGAGGAAGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 14 + 190779 ACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 430 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=69.000000 s hg38.chr3_KI270779v1_alt 152764 2 + 205312 AG s panTro5.chr3 200147213 2 + 202621043 GG i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110772 430 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6480.000000 s hg38.chr3_KI270779v1_alt 152766 24 + 205312 TGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200147215 24 + 202621043 TGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 24 + 190779 TGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 430 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15765.000000 s hg38.chr3_KI270779v1_alt 152790 24 + 205312 CTGTGGATACTGAGGAAAGGCTGG s panTro5.chr3 200147239 24 + 202621043 CTGTGGATACTGAGGAAGCGTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 24 + 190779 CTGTGGATACTGAGGAAGCGTCGG i panPan2.chrUn_NW_014024201v1 C 0 T 48 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 24 + 17725628 CTGTGGATGCCGAGGAGGTGCTGG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17776.000000 s hg38.chr3_KI270779v1_alt 152814 24 + 205312 TGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200147263 24 + 202621043 TGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 24 + 190779 TGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 48 C 0 s macFas5.chr2 98664 24 + 192460366 TGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479135 24 + 17725628 TCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7116.000000 s hg38.chr3_KI270779v1_alt 152838 8 + 205312 CTGTGGAT s panTro5.chr3 200147287 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 54 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17232.000000 s hg38.chr3_KI270779v1_alt 152846 42 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCG s panTro5.chr3 200147295 42 + 202621043 ACTGAGGAAGTGTCGGTGATAGGAAGAGGAGTGACGTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 42 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479119 42 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCT i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 54 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4296.000000 s hg38.chr3_KI270779v1_alt 152888 5 + 205312 GTGGA s panTro5.chr3 200147337 5 + 202621043 GTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110416 5 + 190779 GTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98642 5 + 192460366 GTGGA i macFas5.chr2 T 54 C 0 s saiBol1.JH378146 479161 5 + 17725628 GTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16860.000000 s hg38.chr3_KI270779v1_alt 152893 41 + 205312 TGCTGAGGAAGGGCTGGTGACATGAAGAGGGG-TGGCGTGAC s panTro5.chr3 200147342 42 + 202621043 TGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110421 41 + 190779 TACTGAGGAAGGGCTGGTGACAGGAAGAGGGG-TGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98647 41 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGG-TAGCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=32976.000000 s hg38.chr3_KI270779v1_alt 152934 48 + 205312 CTGTGGATATTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200147384 48 + 202621043 CTGTGGATACGGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=32739.000000 s hg38.chr3_KI270779v1_alt 152982 55 + 205312 CTGTGGATGCTGAGGAAG------------------------------------------------TGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200147432 103 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGATGTCACCGCTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 55 + 190779 CTGTGGATACTGAGGAAA------------------------------------------------TGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAG------------------------------------------------CACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGG------------------------------------------------TGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 48 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 153037 1 + 205312 T s panTro5.chr3 200147535 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110565 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=27839.000000 s hg38.chr3_KI270779v1_alt 153038 117 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACA s panTro5.chr3 200147536 117 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATCTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGATACTGAGGAAGTGTTGGTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110566 117 + 190779 GCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACA i panPan2.chrUn_NW_014024201v1 C 0 T 96 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5061.000000 s hg38.chr3_KI270779v1_alt 153155 19 + 205312 GGAAGAGGCGTGGTGTCAC s panTro5.chr3 200147653 19 + 202621043 GGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110587 19 + 190779 GGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 96 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17936.000000 s hg38.chr3_KI270779v1_alt 153174 41 + 205312 CTGTGGATACTGAGGAAAGGCTGGTGAGAGGAAGAGGGGTA s panTro5.chr3 200147672 41 + 202621043 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 41 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTG i panPan2.chrUn_NW_014024201v1 C 0 T 192 s macFas5.chr2 98640 41 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTA i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4092.000000 s hg38.chr3_KI270779v1_alt 153215 7 + 205312 GCGTGAC s panTro5.chr3 200147713 7 + 202621043 GCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110455 7 + 190779 GCGTGAC i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 98681 7 + 192460366 GCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23315.000000 s hg38.chr3_KI270779v1_alt 153222 48 + 205312 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200147720 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25316.000000 s hg38.chr3_KI270779v1_alt 153270 57 + 205312 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACA s panTro5.chr3 200147768 57 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 57 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1146.000000 s hg38.chr3_KI270779v1_alt 153327 2 + 205312 CT s panTro5.chr3 200147825 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110567 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 2 + 192460366 CT i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3913579 1308 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18324.000000 s hg38.chr3_KI270779v1_alt 153329 37 + 205312 GACGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro5.chr3 200147827 37 + 202621043 GAGGAAGTATCAGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110569 37 + 190779 GAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98651 37 + 192460366 GAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s dasNov3.JH569502 3914887 37 + 6579706 GACGTAGCAGAGGTAGGCGTGGGAGGGAAGGCGTGGC i dasNov3.JH569502 I 1308 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=34446.000000 s hg38.chr3_KI270779v1_alt 153366 48 + 205312 CTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGAC s panTro5.chr3 200147864 48 + 202621043 CTGTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 48 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 s dasNov3.JH569502 3914924 44 + 6579706 TTGTGGTGGGTTGTGAAGTGCTGGTGTCGGCAGGGGTCATGGGA---- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=37496.000000 s hg38.chr3_KI270779v1_alt 153414 52 + 205312 CTGTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGT s panTro5.chr3 200147912 52 + 202621043 CTGTGAATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 52 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 52 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGT i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 52 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGT i saiBol1.JH378146 T 48 C 0 s dasNov3.JH569502 3914968 38 + 6579706 --------------GTGGTCCCGGTGGAGGGGAGGGCGGTGGGCTCCTCTGA i dasNov3.JH569502 C 0 I 1623 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2698.000000 s hg38.chr3_KI270779v1_alt 153466 3 + 205312 GGA s panTro5.chr3 200147964 3 + 202621043 GGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110706 3 + 190779 GGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98692 3 + 192460366 GAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479163 3 + 17725628 GAA i saiBol1.JH378146 C 0 T 55 s dasNov3.JH569502 3916629 3 + 6579706 GGG i dasNov3.JH569502 I 1623 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=910.000000 s hg38.chr3_KI270779v1_alt 153469 1 + 205312 T s panTro5.chr3 200147967 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 s dasNov3.JH569502 3916632 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11575.000000 s hg38.chr3_KI270779v1_alt 153470 40 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200147968 40 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110710 40 + 190779 GGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s dasNov3.JH569502 3916633 40 + 6579706 GGCGACGTAGCAGAGGTAGGCGTGGGAGGGAAGGCGTGGC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21980.000000 s hg38.chr3_KI270779v1_alt 153510 18 + 205312 CTGTGGATGCTGAGGAAG s panTro5.chr3 200148008 18 + 202621043 CTGTGGATACTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 18 + 190779 CTGTGGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 144 s macFas5.chr2 98640 18 + 192460366 CTGTGGATGCTGAGAAAG i macFas5.chr2 T 56 C 0 s calJac3.chr17 957014 18 - 74750902 CTGTGGGTGCCGAGGCGG i calJac3.chr17 T 55 C 0 s saiBol1.JH378146 479111 18 + 17725628 CTGTGGATGCCGAGGAGG i saiBol1.JH378146 T 55 C 0 s dasNov3.JH569502 3916673 18 + 6579706 TTGTGGTGGGTTGTGAAG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=37461.000000 s hg38.chr3_KI270779v1_alt 153528 37 + 205312 TGCTGGTGACAGGAAGAG---GGGTGGCGTGACCTGTGGA s panTro5.chr3 200148026 37 + 202621043 CGTCGGTGACAGGAAGAG---GGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110624 37 + 190779 GGCTAGTGACAGGAAGAG---AGGTGGTGTCACCTGGGGA i panPan2.chrUn_NW_014024201v1 T 144 C 0 s macFas5.chr2 98658 37 + 192460366 CACCCGTGACAGGAAGAG---TGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s calJac3.chr17 957032 37 - 74750902 TGCTGGTGACAGCAAGAG---GGGCCGCGTGGCCTGTGGA i calJac3.chr17 C 0 T 55 s saiBol1.JH378146 479129 37 + 17725628 TGCTGGTCACAGGAAGCG---GGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 s dasNov3.JH569502 3916691 40 + 6579706 TGCTGGTGTCGGCAGGGGTCATGGGAGTGGTCCCGGTAGA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=-1294.000000 s hg38.chr3_KI270779v1_alt 153565 1 + 205312 -T s panTro5.chr3 200148063 1 + 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110661 1 + 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 -T i macFas5.chr2 C 0 T 56 s dasNov3.JH569502 3916731 1 + 6579706 G- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23086.000000 s hg38.chr3_KI270779v1_alt 153566 105 + 205312 ------GCTGCGGAAGTGTCGGTAACAGGAAGAGGGGTGGCGTGACCGGTGGATGCTGAG-GAAGGGCTGGTGA----CATGAAGAGAGGTGGCGTGACGTGTGGATAATGAGGAA s panTro5.chr3 200148064 105 + 202621043 ------ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGTATACTGAG-GAAGCGTCGGTGA----CAGGAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110662 105 + 190779 ------ACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGGTGAG-GAAGCGTCGGTGA----CAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 432 s dasNov3.JH569502 3916732 108 + 6579706 GGGAGGGCGGTGGGCTCCTCTGAGAGAGGAAGTGAGGATGCAGCTC-------TGCTGAGAGGCTCACCGGTAGAGCTCATGTAGGTCggtggtgt-actggtgttggtggtggaa i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16674.000000 s hg38.chr3_KI270779v1_alt 153671 62 + 205312 GCATTGGTGACAGGAAGAGGGGTGGTGTCACCTG--TGGATGCTGAGGGAGTGTC-GGTGACAGG s panTro5.chr3 200148169 62 + 202621043 GCGTCTGTGACAGGAAGAGGGGTGGCGTCACCTG--TGGATACTGAGGAAGGGTC-GGTGACAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110335 62 + 190779 GCACTGCTGACAGGAAGAGGGGTGGTGTCACCTG--TGGATACTGAGGAAGCGTC-GGTGACAGG i panPan2.chrUn_NW_014024201v1 T 432 C 0 s dasNov3.JH569502 3916840 56 + 6579706 gcggtgttg---------gtggtggAAGCCCCTGACTGGACAGTGACAGGGTGTCTGGTGGTGGG i dasNov3.JH569502 C 0 I 21 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15746.000000 s hg38.chr3_KI270779v1_alt 153733 65 + 205312 TAGAGGGGTGGTGTGACCTGTAGATGCTGAGGAAGGGCTGGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200148231 65 + 202621043 AAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110397 65 + 190779 AAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10879.000000 s hg38.chr3_KI270779v1_alt 153798 24 + 205312 CTGTGGATACTGACGAAGCGTCGG s panTro5.chr3 200148296 24 + 202621043 CTGTGGATGCTGAGGAAGCGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 24 + 190779 CTGTGGATACTGAGGAAGCGTCGG i panPan2.chrUn_NW_014024201v1 C 0 T 144 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15903.000000 s hg38.chr3_KI270779v1_alt 153822 33 + 205312 TGACAAGAAGAGGGGTGGTGTGACCTGTGGATA s panTro5.chr3 200148320 33 + 202621043 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 33 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panPan2.chrUn_NW_014024201v1 T 144 C 0 s macFas5.chr2 98664 33 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10623.000000 s hg38.chr3_KI270779v1_alt 153855 39 + 205312 CTGAGGAAGTGTCGGTGCCAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200148353 39 + 202621043 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 39 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=60051.000000 s hg38.chr3_KI270779v1_alt 153894 55 + 205312 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGA s panTro5.chr3 200148392 55 + 202621043 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 55 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 57 C 0 s calJac3.chr17 957014 55 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 T 55 T 55 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 153949 1 + 205312 T s panTro5.chr3 200148447 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8731.000000 s hg38.chr3_KI270779v1_alt 153950 40 + 205312 GCCGAGGAAACGTCGGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200148448 40 + 202621043 ATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 T 192 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22544.000000 s hg38.chr3_KI270779v1_alt 153990 56 + 205312 CTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGATGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200148488 56 + 202621043 CTGTGGATACTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110318 56 + 190779 CTGTGGAAGCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10218.000000 s hg38.chr3_KI270779v1_alt 154046 38 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTC s panTro5.chr3 200148544 38 + 202621043 ACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 38 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTC i panPan2.chrUn_NW_014024201v1 C 0 I 192 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=573.000000 s hg38.chr3_KI270779v1_alt 154084 2 + 205312 AC s panTro5.chr3 200148582 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110604 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 I 192 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23183.000000 s hg38.chr3_KI270779v1_alt 154086 51 + 205312 CTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTG s panTro5.chr3 200148584 51 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGCGGTGGCGTGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 51 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 51 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 56 I 5 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4727.000000 s hg38.chr3_KI270779v1_alt 154137 14 + 205312 AGGATGCTGAGGAA s panTro5.chr3 200148635 14 + 202621043 TGGATGGTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110657 14 + 190779 GGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98696 14 + 192460366 AGGGTGGTGGAGAA i macFas5.chr2 I 5 T 70 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5883.000000 s hg38.chr3_KI270779v1_alt 154151 31 + 205312 GGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200148649 31 + 202621043 GCGTCGGTGACAGGAAGAGGGGTGCTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110671 31 + 190779 GTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98710 70 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=24922.000000 s hg38.chr3_KI270779v1_alt 154182 56 + 205312 CTGTGGATACTGAGGAAGCGTCGGTGACATGAAGAGGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200148680 56 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGATGGGTGCTGTCACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 56 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 70 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2379.000000 s hg38.chr3_KI270779v1_alt 154238 14 + 205312 GCTGAGGAAGGGCT s panTro5.chr3 200148736 14 + 202621043 ACTGAGGAAGCGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 14 + 190779 ACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 430 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=69.000000 s hg38.chr3_KI270779v1_alt 154252 2 + 205312 AG s panTro5.chr3 200148750 2 + 202621043 GG i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110772 430 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6480.000000 s hg38.chr3_KI270779v1_alt 154254 24 + 205312 TGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200148752 24 + 202621043 TGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 24 + 190779 TGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 430 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=32850.000000 s hg38.chr3_KI270779v1_alt 154278 48 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200148776 48 + 202621043 CTGTGGATAATGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5935.000000 s hg38.chr3_KI270779v1_alt 154326 7 + 205312 CTGTGGA s panTro5.chr3 200148824 7 + 202621043 CTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110318 7 + 190779 CTGTGGA i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 98688 7 + 192460366 CTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479159 7 + 17725628 CTGTGAA i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=54.000000 s hg38.chr3_KI270779v1_alt 154333 1 + 205312 T s panTro5.chr3 200148831 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110325 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479118 1 + 17725628 T i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=28833.000000 s hg38.chr3_KI270779v1_alt 154334 47 + 205312 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200148832 47 + 202621043 ACTGAGGACGGGCTGGTGACTGTAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110326 47 + 190779 GCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 47 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 154381 1 + 205312 T s panTro5.chr3 200148879 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110373 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10115.000000 s hg38.chr3_KI270779v1_alt 154382 40 + 205312 GCTGAGGAAGGGCTAGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200148880 40 + 202621043 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=35723.000000 s hg38.chr3_KI270779v1_alt 154422 48 + 205312 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGAGGTGGCGTGAC s panTro5.chr3 200148920 48 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACGGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 48 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6393.000000 s hg38.chr3_KI270779v1_alt 154470 8 + 205312 CTGTGGAC s panTro5.chr3 200148968 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479159 8 + 17725628 CTGTGAAC i saiBol1.JH378146 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4971.000000 s hg38.chr3_KI270779v1_alt 154478 10 + 205312 ACTGAGGAAG s panTro5.chr3 200148976 10 + 202621043 ACTGAGGAAG i panTro5.chr3 C 0 T 1056 s panPan2.chrUn_NW_014024201v1 110470 10 + 190779 ACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 10 + 192460366 GCTGAGAAAG i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16696.000000 s hg38.chr3_KI270779v1_alt 154488 38 + 205312 CATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT s panTro5.chr3 200147930 38 + 202621043 CGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGAT i panTro5.chr3 T 1056 C 0 s panPan2.chrUn_NW_014024201v1 110480 38 + 190779 CGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98658 38 + 192460366 CACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7715.000000 s hg38.chr3_KI270779v1_alt 154526 40 + 205312 GCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGTC s panTro5.chr3 200147968 40 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110518 40 + 190779 ACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20564.000000 s hg38.chr3_KI270779v1_alt 154566 46 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAAGAAGAGGGATGGCGTG s panTro5.chr3 200148008 46 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 46 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTC i panPan2.chrUn_NW_014024201v1 C 0 T 192 s macFas5.chr2 98640 46 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTG i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1146.000000 s hg38.chr3_KI270779v1_alt 154612 2 + 205312 AC s panTro5.chr3 200148054 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110412 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 98686 2 + 192460366 AC i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7116.000000 s hg38.chr3_KI270779v1_alt 154614 8 + 205312 CTGTGGAT s panTro5.chr3 200148056 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=27696.000000 s hg38.chr3_KI270779v1_alt 154622 40 + 205312 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200148064 40 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110422 40 + 190779 ACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479119 40 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=34768.000000 s hg38.chr3_KI270779v1_alt 154662 48 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC s panTro5.chr3 200148104 48 + 202621043 CTGTGTATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6206.000000 s hg38.chr3_KI270779v1_alt 154710 7 + 205312 CTGTGGA s panTro5.chr3 200148152 7 + 202621043 CTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 7 + 190779 CTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479159 7 + 17725628 CTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21771.000000 s hg38.chr3_KI270779v1_alt 154717 50 + 205312 TGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATA s panTro5.chr3 200148159 50 + 202621043 TACTGAGGAAGCGTCTGTGACAGGAAGAGGGGTGGCGTCACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110517 50 + 190779 TACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98647 50 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21954.000000 s hg38.chr3_KI270779v1_alt 154767 87 + 205312 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCCC s panTro5.chr3 200148209 87 + 202621043 CTGAGGAAGGGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110567 87 + 190779 CTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7585.000000 s hg38.chr3_KI270779v1_alt 154854 17 + 205312 CTGTGGATAATGAGGAA s panTro5.chr3 200148296 17 + 202621043 CTGTGGATGCTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 17 + 190779 CTGGGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 I 97 s macFas5.chr2 98640 17 + 192460366 CTGTGGATGCTGAGAAA i macFas5.chr2 T 57 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11197.000000 s hg38.chr3_KI270779v1_alt 154871 31 + 205312 GCATCGGTGACATGAAGAGCGGTGGCGTGAC s panTro5.chr3 200148313 31 + 202621043 GCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110768 31 + 190779 GCTTCGGGGACAGGAAGAGAGGTGTCATGAC i panPan2.chrUn_NW_014024201v1 I 97 C 0 s macFas5.chr2 98657 31 + 192460366 GCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=26286.000000 s hg38.chr3_KI270779v1_alt 154902 57 + 205312 CTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGATA s panTro5.chr3 200148344 57 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110799 57 + 190779 CTGTGGATGCTGAGGAAGCGTTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21477.000000 s hg38.chr3_KI270779v1_alt 154959 47 + 205312 CTGAGGAAGCGTCGGTGACAAGAAGATGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200148401 47 + 202621043 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110856 47 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9593.000000 s hg38.chr3_KI270779v1_alt 155006 44 + 205312 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGT s panTro5.chr3 200148448 44 + 202621043 ATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110903 44 + 190779 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGT i panPan2.chrUn_NW_014024201v1 C 0 T 327 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=473.000000 s hg38.chr3_KI270779v1_alt 155050 5 + 205312 GGATA s panTro5.chr3 200148492 5 + 202621043 GGATA i panTro5.chr3 C 0 I 1297 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110947 327 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=482.000000 s hg38.chr3_KI270779v1_alt 155055 5 + 205312 CTGAG s panTro5.chr3 200149794 5 + 202621043 CTGAG i panTro5.chr3 I 1297 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110947 327 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15244.000000 s hg38.chr3_KI270779v1_alt 155060 92 + 205312 AAAAGGCTGGTGACAGGAAGAGGGGTGTCCTGACCTGTGGATGCTGAGGAAGTATCAGTGACAGGAAGCGGCGTGGTGTCACCAGTGGAT---------------------------------------------GA s panTro5.chr3 200149799 137 + 202621043 GAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTAGATAGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110620 92 + 190779 GAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGAT---------------------------------------------GG i panPan2.chrUn_NW_014024201v1 T 327 T 370 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=793.000000 s hg38.chr3_KI270779v1_alt 155152 11 + 205312 TGCTGAGGAAA s panTro5.chr3 200149936 11 + 202621043 TACTGAGGAAG i panTro5.chr3 C 0 T 961 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110712 370 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=591.000000 s hg38.chr3_KI270779v1_alt 155163 6 + 205312 GGCTGG s panTro5.chr3 200148986 6 + 202621043 GGCTGG i panTro5.chr3 T 961 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110712 370 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10981.000000 s hg38.chr3_KI270779v1_alt 155169 48 + 205312 TGACAGGAAGAGGGGTGGCCTGTCCTGTAGATACTGAGGAAGTGTCGG s panTro5.chr3 200148992 48 + 202621043 TGACAGGAAGAGGGGTGGCATGACCTGTGGATGCTGAGGAAGCTTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 48 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGG i panPan2.chrUn_NW_014024201v1 T 370 I 293 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=268.000000 s hg38.chr3_KI270779v1_alt 155217 5 + 205312 TGACC s panTro5.chr3 200149040 5 + 202621043 TGACA i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e panPan2.chrUn_NW_014024201v1 110390 293 + 190779 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4256.000000 s hg38.chr3_KI270779v1_alt 155222 19 + 205312 GGAAGAGGGGTGGCATGAC s panTro5.chr3 200149045 19 + 202621043 GGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110683 19 + 190779 GGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 I 293 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21283.000000 s hg38.chr3_KI270779v1_alt 155241 48 + 205312 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200149064 48 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 48 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9189.000000 s hg38.chr3_KI270779v1_alt 155289 18 + 205312 CTGTGGACACTGAGGAAG s panTro5.chr3 200149112 18 + 202621043 CTGTGGATACTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 18 + 190779 CTGTGGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 240 s macFas5.chr2 98640 18 + 192460366 CTGTGGATGCTGAGAAAG i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17656.000000 s hg38.chr3_KI270779v1_alt 155307 39 + 205312 CGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGGTA s panTro5.chr3 200149130 39 + 202621043 CGTCAGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110528 39 + 190779 TGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 T 240 C 0 s macFas5.chr2 98658 39 + 192460366 CACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20300.000000 s hg38.chr3_KI270779v1_alt 155346 47 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGAT s panTro5.chr3 200149169 47 + 202621043 CTGAGGAAGTGTCGGTGATAGGAAGAGGAGTGACGTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110567 47 + 190779 CTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9521.000000 s hg38.chr3_KI270779v1_alt 155393 40 + 205312 GCTGAGGAAGGGATGGTGACAGGAAGAGAGGTGGCGTGAC s panTro5.chr3 200149216 40 + 202621043 GCTGAGGAAGGGCTGGTGACAGGAAGATGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 40 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21558.000000 s hg38.chr3_KI270779v1_alt 155433 51 + 205312 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTGACCTG s panTro5.chr3 200149256 51 + 202621043 CTGTGGATACGGAGGAAGCGTCGGTGACAGGAAGAGGCGTGGTGCGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 51 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 51 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 56 T 51 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=-155.000000 s hg38.chr3_KI270779v1_alt 155484 1 + 205312 A s panTro5.chr3 200149307 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110705 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 I 241 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3192.000000 s hg38.chr3_KI270779v1_alt 155485 11 + 205312 GGATGCTGAGG s panTro5.chr3 200149308 11 + 202621043 GGATGCTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110947 11 + 190779 GGATGCTGAGG i panPan2.chrUn_NW_014024201v1 I 241 T 241 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6189.000000 s hg38.chr3_KI270779v1_alt 155496 33 + 205312 AAGGGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200149319 33 + 202621043 AAGGGCTCGTGACAGGAAGTGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110717 33 + 190779 AAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 241 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12653.000000 s hg38.chr3_KI270779v1_alt 155529 15 + 205312 CTGTGGATGCTGAGG s panTro5.chr3 200149352 15 + 202621043 CTGTGGATACTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 15 + 190779 CTGTGGATACTGAGG i panPan2.chrUn_NW_014024201v1 C 0 T 144 s macFas5.chr2 98640 15 + 192460366 CTGTGGATGCTGAGA i macFas5.chr2 T 51 C 0 s saiBol1.JH378146 479111 15 + 17725628 CTGTGGATGCCGAGG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25921.000000 s hg38.chr3_KI270779v1_alt 155544 40 + 205312 AAAGGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200149367 40 + 202621043 AAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110621 40 + 190779 AAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGA i panPan2.chrUn_NW_014024201v1 T 144 C 0 s macFas5.chr2 98655 40 + 192460366 AAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479126 40 + 17725628 AGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270779v1_alt 155584 2 + 205312 TA s panTro5.chr3 200149407 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110661 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19850.000000 s hg38.chr3_KI270779v1_alt 155586 87 + 205312 CTGAGGAAGCGTCGGTGACATGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGTTAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200149409 87 + 202621043 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTAGATAGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110663 87 + 190779 CTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8955.000000 s hg38.chr3_KI270779v1_alt 155673 17 + 205312 CTGTGGATACTGAGGAA s panTro5.chr3 200149496 17 + 202621043 CTGTGGATACTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 17 + 190779 CTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 288 s macFas5.chr2 98640 17 + 192460366 CTGTGGATGCTGAGAAA i macFas5.chr2 T 57 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18638.000000 s hg38.chr3_KI270779v1_alt 155690 40 + 205312 GCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGACA s panTro5.chr3 200149513 40 + 202621043 GCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110479 40 + 190779 GCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATA i panPan2.chrUn_NW_014024201v1 T 288 C 0 s macFas5.chr2 98657 40 + 192460366 GCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10701.000000 s hg38.chr3_KI270779v1_alt 155730 23 + 205312 CTGAGGAAGCGTCGGTGACAGGA s panTro5.chr3 200149553 23 + 202621043 CTGAGGAAGCGTCGGTGACAGGA i panTro5.chr3 C 0 I 961 s panPan2.chrUn_NW_014024201v1 110519 23 + 190779 CTGAGGAAATGTCGGTGACAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 23 + 192460366 CTGAGAAAGCACCCGTGACAGGA i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9312.000000 s hg38.chr3_KI270779v1_alt 155753 24 + 205312 AGAGAGGTGGTGTGACCTGAAGAT s panTro5.chr3 200150537 24 + 202621043 AGAGGGGTGGTGTCACCTGTGGAT i panTro5.chr3 I 961 C 0 s panPan2.chrUn_NW_014024201v1 110542 24 + 190779 AGAGAGGTGTCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98672 24 + 192460366 AGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4592.000000 s hg38.chr3_KI270779v1_alt 155777 23 + 205312 GCTGAGGAAGGGATGGTGACAGG s panTro5.chr3 200150561 23 + 202621043 AATGAGGAAGCGTCGGTGACAGG i panTro5.chr3 C 0 T 1008 s panPan2.chrUn_NW_014024201v1 110566 23 + 190779 GCTGAGGAAGCGTCAGTGACAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4649.000000 s hg38.chr3_KI270779v1_alt 155800 17 + 205312 AAGAGAGGTGGTGTCAC s panTro5.chr3 200149576 17 + 202621043 AAGAGGGGTGGTGTCAC i panTro5.chr3 T 1008 C 0 s panPan2.chrUn_NW_014024201v1 110589 17 + 190779 AAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9415.000000 s hg38.chr3_KI270779v1_alt 155817 21 + 205312 CTGTGGATGCTGAGGAAGCGT s panTro5.chr3 200149593 21 + 202621043 CTGTGGACACTGAGGAAGCGT i panTro5.chr3 C 0 I 1008 s panPan2.chrUn_NW_014024201v1 110606 21 + 190779 CTGTGGATGCTGAGGAAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 21 + 192460366 CTGTGGATGCTGAGAAAGCAC i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10230.000000 s hg38.chr3_KI270779v1_alt 155838 27 + 205312 CGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200150622 27 + 202621043 CAGTGACAGGAAGATGAGTGACGTGAC i panTro5.chr3 I 1008 C 0 s panPan2.chrUn_NW_014024201v1 110627 27 + 190779 TAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98661 27 + 192460366 CCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6296.000000 s hg38.chr3_KI270779v1_alt 155865 8 + 205312 CTGTGGAT s panTro5.chr3 200150649 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 8 + 190779 CTGGGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18327.000000 s hg38.chr3_KI270779v1_alt 155873 47 + 205312 GCTGAGGAAGGGCTGGTGACAGGAAGAG-GGATGGCCTGACCTGTGGA s panTro5.chr3 200150657 48 + 202621043 ACTGAGGAAGGGCTGGTGACAGGGAGAGAGGGTGGTGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110662 47 + 190779 ACTGAGGAAGTGTCCGTGACAGGAAGAG-GGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCG-GGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 53 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12455.000000 s hg38.chr3_KI270779v1_alt 155920 58 + 205312 TGCCGAGGAAACGTCGGTGACAGGAAGACGGGTGGTGTCATCTGTGGAAGCTGAGGAA s panTro5.chr3 200150705 58 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTAGATAGTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 58 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 144 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5698.000000 s hg38.chr3_KI270779v1_alt 155978 31 + 205312 AGGCCGGTGACAGGAAGTGGGGTGGCGTGAG s panTro5.chr3 200150763 31 + 202621043 GCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110623 31 + 190779 GGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 144 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22002.000000 s hg38.chr3_KI270779v1_alt 156009 48 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200150794 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 48 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=24306.000000 s hg38.chr3_KI270779v1_alt 156057 56 + 205312 CTGTGGATGCTGAGGAAGCGTCAGTGACAAGAAGAGGGCTGGCGTGACCTGTGGAT s panTro5.chr3 200150842 56 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAGGAGAGGTGGTGTCGCCTGTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 56 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1951.000000 s hg38.chr3_KI270779v1_alt 156113 14 + 205312 GCTGAGGAAGGGCT s panTro5.chr3 200150898 14 + 202621043 AGTGAGGAAGTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 14 + 190779 ACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 144 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10290.000000 s hg38.chr3_KI270779v1_alt 156127 50 + 205312 AGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGG s panTro5.chr3 200150912 50 + 202621043 GGTGACAGTAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110628 50 + 190779 AGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCG i panPan2.chrUn_NW_014024201v1 T 144 T 336 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15006.000000 s hg38.chr3_KI270779v1_alt 156177 72 + 205312 TGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGACACGTCGGTGACAGGAAGACGGGTGGTGTCAT s panTro5.chr3 200150962 72 + 202621043 TGACAAGAAGAGTGGTGGCGTGACCTGTAGATGGTGAGGAAGCGTCAGTGACAGGAAGAGGGTTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 72 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 336 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3507.000000 s hg38.chr3_KI270779v1_alt 156249 9 + 205312 CTGTGGTAG s panTro5.chr3 200151034 9 + 202621043 CTGTGGATG i panTro5.chr3 C 0 T 1429 s panPan2.chrUn_NW_014024201v1 110414 9 + 190779 CTGTGGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 9 + 192460366 CTGTGGATG i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2256.000000 s hg38.chr3_KI270779v1_alt 156258 12 + 205312 CTGAGGAAAGGC s panPan2.chrUn_NW_014024201v1 110423 12 + 190779 CTGAGGAAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 12 + 192460366 CTGAGAAAGCAC i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro5.chr3 200151043 1429 + 202621043 T a score=-273.000000 s hg38.chr3_KI270779v1_alt 156270 3 + 205312 -CGG s panTro5.chr3 200149614 3 + 202621043 -CGG i panTro5.chr3 T 1429 C 0 s panPan2.chrUn_NW_014024201v1 110435 3 + 190779 -TGG i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 98661 3 + 192460366 CCG- i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16155.000000 s hg38.chr3_KI270779v1_alt 156273 33 + 205312 TGACAGGAAGAGGGGTGGCATGACCTGTGGATA s panTro5.chr3 200149617 33 + 202621043 TGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 33 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 98664 33 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3526.000000 s hg38.chr3_KI270779v1_alt 156306 15 + 205312 CTGAGGAATTGTCGG s panTro5.chr3 200149650 15 + 202621043 CTGAGGAAATGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 15 + 190779 CTGAGGAAGCGTCGG i panPan2.chrUn_NW_014024201v1 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 55 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5718.000000 s hg38.chr3_KI270779v1_alt 156321 26 + 205312 TGACAGGAAGAGGGGTGGCGTGACCG s panTro5.chr3 200149665 26 + 202621043 TGACAGGAAGAGAGGTGTCGTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 26 + 190779 TGACAGGAAGAGGGGTGGTGTCACCT i panPan2.chrUn_NW_014024201v1 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 55 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=32782.000000 s hg38.chr3_KI270779v1_alt 156347 48 + 205312 GTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCGTGACCG s panTro5.chr3 200149691 48 + 202621043 GTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110368 48 + 190779 GTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98642 48 + 192460366 GTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCT i macFas5.chr2 T 55 I 20 s saiBol1.JH378146 479113 48 + 17725628 GTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCT i saiBol1.JH378146 T 53 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11299.000000 s hg38.chr3_KI270779v1_alt 156395 26 + 205312 GTGGATGCTGAGGAAGTGCTGGTGAC s panTro5.chr3 200149739 26 + 202621043 GTGGATACTGAGGAAGTGTCAGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110416 26 + 190779 GTGGATACTGAGGAAGGGCTGGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479113 26 + 17725628 GTGGATGCCGAGGAGGTGCTGGTCAC i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98690 20 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5206.000000 s hg38.chr3_KI270779v1_alt 156421 6 + 205312 AGGAAG s panTro5.chr3 200149765 6 + 202621043 AGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110442 6 + 190779 AGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98710 6 + 192460366 AGAAAG i macFas5.chr2 I 20 T 68 s saiBol1.JH378146 479139 6 + 17725628 AGGAAG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9420.000000 s hg38.chr3_KI270779v1_alt 156427 21 + 205312 AGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200149771 21 + 202621043 ATGAGTGACGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110448 21 + 190779 AGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479145 21 + 17725628 CGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98716 68 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 156448 1 + 205312 T s panTro5.chr3 200149792 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479118 1 + 17725628 T i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98716 68 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=31405.000000 s hg38.chr3_KI270779v1_alt 156449 47 + 205312 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200149793 47 + 202621043 ACTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 47 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 47 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 68 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270779v1_alt 156496 2 + 205312 TA s panTro5.chr3 200149840 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110517 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=-128.000000 s hg38.chr3_KI270779v1_alt 156498 1 + 205312 A s panTro5.chr3 200149842 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110519 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 T 192 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9069.000000 s hg38.chr3_KI270779v1_alt 156499 38 + 205312 TGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200149843 38 + 202621043 TGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110328 38 + 190779 TGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 192 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=38855.000000 s hg38.chr3_KI270779v1_alt 156537 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTAGA s panTro5.chr3 200149881 55 + 202621043 CTGTAGATAGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 55 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 156592 1 + 205312 T s panTro5.chr3 200149936 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110421 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3438.000000 s hg38.chr3_KI270779v1_alt 156593 16 + 205312 GCTGAGGAAGGGCTGG s panTro5.chr3 200149937 16 + 202621043 ACTGAGGAAGCGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110422 16 + 190779 ACTGAGGAAGGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 T 96 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5974.000000 s hg38.chr3_KI270779v1_alt 156609 24 + 205312 TGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200149953 24 + 202621043 TGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 24 + 190779 TGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 96 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21075.000000 s hg38.chr3_KI270779v1_alt 156633 48 + 205312 CTTTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro5.chr3 200149977 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAGGAGAGGTGGTGTCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=39109.000000 s hg38.chr3_KI270779v1_alt 156681 55 + 205312 CTGTAGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGA s panTro5.chr3 200150025 55 + 202621043 CTGTAGATAGTGAGGAAGTGTCGGTGACAGTAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 55 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270779v1_alt 156736 2 + 205312 TA s panTro5.chr3 200150080 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9221.000000 s hg38.chr3_KI270779v1_alt 156738 39 + 205312 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200150082 39 + 202621043 CTGAGGAAGTGTCGGTGACAAGAAGAGTGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110471 39 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=37653.000000 s hg38.chr3_KI270779v1_alt 156777 55 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200150121 55 + 202621043 CTGTAGATGGTGAGGAAGCGTCAGTGACAGGAAGAGGGTTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 55 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 156832 1 + 205312 T s panTro5.chr3 200150176 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110565 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12505.000000 s hg38.chr3_KI270779v1_alt 156833 32 + 205312 GCTGAGGAAGGGCTGGTGACATGAAGAGGAGT s panTro5.chr3 200150177 32 + 202621043 GCTGAGGACGGGCTGGTGACAGGAAGAGAGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110566 32 + 190779 GCTGAGGAAGCGTCAGTGACAGGAAGAGGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 32 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGT i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085096 123 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6113.000000 s hg38.chr3_KI270779v1_alt 156865 16 + 205312 GACGTGACCTGTGGAT s panTro5.chr3 200150209 16 + 202621043 GGCCTGACCTTTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110598 16 + 190779 GGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98680 16 + 192460366 AGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 s canFam3.chr33 29085219 16 + 31377067 GACGTGTGATGTTGTT i canFam3.chr33 I 123 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10582.000000 s hg38.chr3_KI270779v1_alt 156881 40 + 205312 GCTGAGGAAGTGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200150225 40 + 202621043 ACTGAGGAAGTGACGGTGACAGGAAGAGAGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 40 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s canFam3.chr33 29085235 40 + 31377067 GCTGATGTGTTGCTTTTGCTGGAAGATGATGAGGTGTCAC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11220.000000 s hg38.chr3_KI270779v1_alt 156921 20 + 205312 CTGTGGATACTGAGGAAGTG s panTro5.chr3 200150265 20 + 202621043 CTGTGGATACTGAGGAAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 20 + 190779 CTGGGGATACTGAGGAAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 20 + 192460366 CTGTGGATGCTGAGAAAGCA i macFas5.chr2 T 56 C 0 s canFam3.chr33 29085275 20 + 31377067 CAGGGAAGGCTGATGGTGTG i canFam3.chr33 C 0 I 792 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12377.000000 s hg38.chr3_KI270779v1_alt 156941 28 + 205312 TCGGTGACAAGAAGAGAGGTGGCCTGAC s panTro5.chr3 200150285 28 + 202621043 TCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110674 28 + 190779 TCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98660 28 + 192460366 CCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=40642.000000 s hg38.chr3_KI270779v1_alt 156969 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGA s panTro5.chr3 200150313 55 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 55 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270779v1_alt 157024 2 + 205312 TA s panTro5.chr3 200150368 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110757 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3549.000000 s hg38.chr3_KI270779v1_alt 157026 8 + 205312 CTGAGGAA s panTro5.chr3 200150370 8 + 202621043 ATGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110759 8 + 190779 CTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 192 s macFas5.chr2 98649 8 + 192460366 CTGAGAAA i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17261.000000 s hg38.chr3_KI270779v1_alt 157034 39 + 205312 GCATCGGTGACATGAAGAGGGGTGGTGTGACCTGTAGAT s panTro5.chr3 200150378 39 + 202621043 GCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110575 39 + 190779 GCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 98657 39 + 192460366 GCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8731.000000 s hg38.chr3_KI270779v1_alt 157073 40 + 205312 GCTGAGGAAGGGCTGGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200150417 40 + 202621043 ACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 40 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25548.000000 s hg38.chr3_KI270779v1_alt 157113 57 + 205312 CTGTGGATACTGACGAAGCGTCGGTGACAAGAAGAGGGGTGGTGTGACCTGTGGATA s panTro5.chr3 200150457 57 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 57 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 56 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9479.000000 s hg38.chr3_KI270779v1_alt 157170 39 + 205312 CTGAGGAAGTGTCGGTGCCAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200150514 39 + 202621043 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110711 39 + 190779 GTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17671.000000 s hg38.chr3_KI270779v1_alt 157209 16 + 205312 CTGTGGATGCTGAGGA s panTro5.chr3 200150553 16 + 202621043 CTGTGGATAATGAGGA i panTro5.chr3 C 0 I 1395 s panPan2.chrUn_NW_014024201v1 110750 16 + 190779 CTGTGGATACTGAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 16 + 192460366 CTGTGGATGCTGAGAA i macFas5.chr2 T 57 C 0 s calJac3.chr17 957014 16 - 74750902 CTGTGGGTGCCGAGGC i calJac3.chr17 T 55 C 0 s saiBol1.JH378146 479111 16 + 17725628 CTGTGGATGCCGAGGA i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1187.000000 s hg38.chr3_KI270779v1_alt 157225 2 + 205312 AG s panPan2.chrUn_NW_014024201v1 110766 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 T 336 s macFas5.chr2 98656 2 + 192460366 AG i macFas5.chr2 C 0 C 0 s calJac3.chr17 957030 2 - 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 479127 2 + 17725628 GG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro5.chr3 200150569 1395 + 202621043 I a score=36853.000000 s hg38.chr3_KI270779v1_alt 157227 37 + 205312 TGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGA s panTro5.chr3 200151964 37 + 202621043 CGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGA i panTro5.chr3 I 1395 C 0 s panPan2.chrUn_NW_014024201v1 110432 37 + 190779 GGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 336 C 0 s macFas5.chr2 98658 37 + 192460366 CACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s calJac3.chr17 957032 37 - 74750902 TGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 C 0 T 55 s saiBol1.JH378146 479129 37 + 17725628 TGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 157264 1 + 205312 T s panTro5.chr3 200152001 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7825.000000 s hg38.chr3_KI270779v1_alt 157265 40 + 205312 GCCGAGGAAACGTTGGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200152002 40 + 202621043 ACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23742.000000 s hg38.chr3_KI270779v1_alt 157305 56 + 205312 CTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGATGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200152042 56 + 202621043 CTGTGGATACTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 56 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20421.000000 s hg38.chr3_KI270779v1_alt 157361 88 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGAGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200152098 88 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTAGATAGTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110566 88 + 190779 GCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=38976.000000 s hg38.chr3_KI270779v1_alt 157449 55 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200152186 55 + 202621043 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 55 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=613.000000 s hg38.chr3_KI270779v1_alt 157504 2 + 205312 TA s panTro5.chr3 200152241 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 2 + 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12815.000000 s hg38.chr3_KI270779v1_alt 157506 55 + 205312 CTGAGGAAGCGTCGGTGACATGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGTT s panTro5.chr3 200152243 55 + 202621043 GTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGGGGATGCTGAGGA i panTro5.chr3 C 0 T 1729 s panPan2.chrUn_NW_014024201v1 110711 55 + 190779 GTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=273.000000 s hg38.chr3_KI270779v1_alt 157561 1 + 205312 A s panTro5.chr3 200150569 1 + 202621043 A i panTro5.chr3 T 1729 C 0 s panPan2.chrUn_NW_014024201v1 110766 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 T 336 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6971.000000 s hg38.chr3_KI270779v1_alt 157562 31 + 205312 GTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200150570 31 + 202621043 GCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110431 31 + 190779 GGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 336 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25539.000000 s hg38.chr3_KI270779v1_alt 157593 57 + 205312 CTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGACA s panTro5.chr3 200150601 57 + 202621043 CTGTGGATACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 57 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 57 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11492.000000 s hg38.chr3_KI270779v1_alt 157650 28 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGA s panTro5.chr3 200150658 28 + 202621043 CTGAGGAAGGGCTGGTGACAGGGAGAGA i panTro5.chr3 C 0 I 1729 s panPan2.chrUn_NW_014024201v1 110519 28 + 190779 CTGAGGAAATGTCGGTGACAGGAAGAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 28 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGT i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8166.000000 s hg38.chr3_KI270779v1_alt 157678 19 + 205312 GGTGGTGTGACCTGAAGAT s panTro5.chr3 200152415 19 + 202621043 GGTGGCGTGACCTGTGGAT i panTro5.chr3 I 1729 C 0 s panPan2.chrUn_NW_014024201v1 110547 19 + 190779 GGTGTCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98677 19 + 192460366 GGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5105.000000 s hg38.chr3_KI270779v1_alt 157697 24 + 205312 GCTGAGGAAGGGATGGTGACAGGA s panTro5.chr3 200152434 24 + 202621043 GGTGAGGAAGCGTCGGTGACAGGA i panTro5.chr3 C 0 T 2881 s panPan2.chrUn_NW_014024201v1 110566 24 + 190779 GCTGAGGAAGCGTCAGTGACAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4376.000000 s hg38.chr3_KI270779v1_alt 157721 16 + 205312 AGAGAGGTGGTGTCAC s panTro5.chr3 200149577 16 + 202621043 AGAGGGGTGGTGTCAC i panTro5.chr3 T 2881 C 0 s panPan2.chrUn_NW_014024201v1 110590 16 + 190779 AGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9415.000000 s hg38.chr3_KI270779v1_alt 157737 21 + 205312 CTGTGGATGCTGAGGAAGCGT s panTro5.chr3 200149593 21 + 202621043 CTGTGGACACTGAGGAAGCGT i panTro5.chr3 C 0 I 2881 s panPan2.chrUn_NW_014024201v1 110606 21 + 190779 CTGTGGATGCTGAGGAAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 21 + 192460366 CTGTGGATGCTGAGAAAGCAC i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11658.000000 s hg38.chr3_KI270779v1_alt 157758 27 + 205312 CGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200152495 27 + 202621043 CAGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 I 2881 C 0 s panPan2.chrUn_NW_014024201v1 110627 27 + 190779 TAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98661 27 + 192460366 CCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6296.000000 s hg38.chr3_KI270779v1_alt 157785 8 + 205312 CTGTGGAT s panTro5.chr3 200152522 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 8 + 190779 CTGGGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18101.000000 s hg38.chr3_KI270779v1_alt 157793 47 + 205312 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGATGGCCTGACCTGTGGA s panTro5.chr3 200152530 47 + 202621043 GGTGTGGAAGCATCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110662 47 + 190779 ACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 53 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12905.000000 s hg38.chr3_KI270779v1_alt 157840 58 + 205312 TGCCGAGGAAACGTCGGTGACAGGAAGACGGGTGGTGTCATCTGTGGAAGCTGAAGAA s panTro5.chr3 200152577 58 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATACTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 58 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 144 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4934.000000 s hg38.chr3_KI270779v1_alt 157898 31 + 205312 AGGCCGGTGACAGGAAGTGGGGTGGCGTGAG s panTro5.chr3 200152635 31 + 202621043 GTGTCAGTGACAGGAAGAGGAGTAACGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110623 31 + 190779 GGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 144 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20195.000000 s hg38.chr3_KI270779v1_alt 157929 48 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200152666 48 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 48 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25715.000000 s hg38.chr3_KI270779v1_alt 157977 56 + 205312 CTGTGGATGCTGAGGAAGCGTCAGTGACAAGAAGAGGGCTGGCGTGACCTGTGGAT s panTro5.chr3 200152714 56 + 202621043 CTGTGGATACTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGCATGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 56 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2259.000000 s hg38.chr3_KI270779v1_alt 158033 14 + 205312 GCTGAGGAAGGGCT s panTro5.chr3 200152770 14 + 202621043 ACTGAGGAAGCATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 14 + 190779 ACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 384 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12290.000000 s hg38.chr3_KI270779v1_alt 158047 50 + 205312 AGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGG s panTro5.chr3 200152784 50 + 202621043 GGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATACTGAGGAAGTGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110388 50 + 190779 GGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGG i panPan2.chrUn_NW_014024201v1 T 384 T 96 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17481.000000 s hg38.chr3_KI270779v1_alt 158097 72 + 205312 TGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAACGTCGGTGACAGGAAGACGGGTGGTGTCAT s panTro5.chr3 200152834 72 + 202621043 TGACAGGAAGAGGGGTAGTGTCACCTGTGGATGCTGAGGAAGCGTCGGTGACAGCAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 72 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 96 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8019.000000 s hg38.chr3_KI270779v1_alt 158169 21 + 205312 CTGTGGTAGCTGAGGAAAGGC s panTro5.chr3 200152906 21 + 202621043 CTGTGGATGCTGAGGAAGCGT i panTro5.chr3 C 0 T 3313 s panPan2.chrUn_NW_014024201v1 110414 21 + 190779 CTGTGGATACTGAGGAAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 21 + 192460366 CTGTGGATGCTGAGAAAGCAC i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=-273.000000 s hg38.chr3_KI270779v1_alt 158190 3 + 205312 -CGG s panTro5.chr3 200149614 3 + 202621043 -CGG i panTro5.chr3 T 3313 C 0 s panPan2.chrUn_NW_014024201v1 110435 3 + 190779 -TGG i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 98661 3 + 192460366 CCG- i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16548.000000 s hg38.chr3_KI270779v1_alt 158193 33 + 205312 TGACAGGAAGAGGGGTGGCGTGACCTGTGGATA s panTro5.chr3 200149617 33 + 202621043 TGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 33 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 98664 33 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9244.000000 s hg38.chr3_KI270779v1_alt 158226 41 + 205312 CTGAGGAATTGTCGGTGACAGGAAGAGGGGTGGCGTGACCG s panTro5.chr3 200149650 41 + 202621043 CTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 41 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCT i panPan2.chrUn_NW_014024201v1 C 0 T 96 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 53 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18540.000000 s hg38.chr3_KI270779v1_alt 158267 48 + 205312 GTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGAGGTGGCGTGACCG s panTro5.chr3 200149691 48 + 202621043 GTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110320 48 + 190779 GTGGAAGCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCACCT i panPan2.chrUn_NW_014024201v1 T 96 C 0 s saiBol1.JH378146 479113 48 + 17725628 GTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCT i saiBol1.JH378146 T 53 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 443829 126 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=36165.000000 s hg38.chr3_KI270779v1_alt 158315 51 + 205312 GTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTG s panTro5.chr3 200149739 51 + 202621043 GTGGATACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGACCTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110368 51 + 190779 GTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479113 51 + 17725628 GTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTG i saiBol1.JH378146 T 48 C 0 s cebCap1.NW_016107444v1 443955 51 - 6778120 GTGGATGCCGAGGAGGTACTGGTGGCAGGAGGCCGGGTGGCGTGGCCTGTG i cebCap1.NW_016107444v1 I 126 I 1646 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=753.000000 s hg38.chr3_KI270779v1_alt 158366 2 + 205312 GA s panTro5.chr3 200149790 2 + 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110419 2 + 190779 GA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479164 2 + 17725628 AA i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12547.000000 s hg38.chr3_KI270779v1_alt 158368 29 + 205312 TGCTGAGGAAGGGCTGGTGACATGAAGAG s panTro5.chr3 200149792 29 + 202621043 TACTGAGGAAGGGCTGGTGACAGGGAGAG i panTro5.chr3 C 0 I 865 s panPan2.chrUn_NW_014024201v1 110421 29 + 190779 TACTGAGGAAGGGCTGGTGACAGGAAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479118 29 + 17725628 TGCCGAGGAGGTGCTGGTCACAGGAAGCG i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9924.000000 s hg38.chr3_KI270779v1_alt 158397 19 + 205312 GGGTGGCGTGACCTGTGGA s panTro5.chr3 200150686 19 + 202621043 GGGTGGTGTGACCTGTGGA i panTro5.chr3 I 865 C 0 s panPan2.chrUn_NW_014024201v1 110450 19 + 190779 GGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479147 19 + 17725628 GGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9514.000000 s hg38.chr3_KI270779v1_alt 158416 41 + 205312 TAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200150705 41 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 41 + 190779 TACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 T 192 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10389.000000 s hg38.chr3_KI270779v1_alt 158457 48 + 205312 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200150746 48 + 202621043 CTGTAGATAGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110318 48 + 190779 CTGTGGAAGCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 192 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25266.000000 s hg38.chr3_KI270779v1_alt 158505 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTAGA s panTro5.chr3 200150794 55 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 55 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19883.000000 s hg38.chr3_KI270779v1_alt 158560 89 + 205312 TGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTTTGGATGCTGAGGTAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro5.chr3 200150849 89 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAGGAGAGGTGGTGTCGCCTGTAGATAGTGAGGAAGTGTCGGTGACAGTAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110421 89 + 190779 TACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23351.000000 s hg38.chr3_KI270779v1_alt 158649 55 + 205312 CTGTAGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGA s panTro5.chr3 200150938 55 + 202621043 CTGTGGATACTGAGGAAGTGTCGGTGACAAGAAGAGTGGTGGCGTGACCTGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 55 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15710.000000 s hg38.chr3_KI270779v1_alt 158704 63 + 205312 TACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCT s panTro5.chr3 200150993 63 + 202621043 TGGTGAGGAAGCGTCAGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGACGGGCT i panTro5.chr3 C 0 I 2448 s panPan2.chrUn_NW_014024201v1 110565 63 + 190779 TGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6285.000000 s hg38.chr3_KI270779v1_alt 158767 26 + 205312 AGTGACAGGAAGAGGCATGGTGTCAC s panTro5.chr3 200153504 26 + 202621043 GGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 I 2448 C 0 s panPan2.chrUn_NW_014024201v1 110628 26 + 190779 AGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=24710.000000 s hg38.chr3_KI270779v1_alt 158793 55 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200153530 55 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 55 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7782.000000 s hg38.chr3_KI270779v1_alt 158848 35 + 205312 TGCTGAGGAAGGGCTGGTGACATGAAGAGGAGTGA s panTro5.chr3 200153585 35 + 202621043 TGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGA i panTro5.chr3 C 0 T 4946 s panPan2.chrUn_NW_014024201v1 110709 35 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5947.000000 s hg38.chr3_KI270779v1_alt 158883 24 + 205312 CGTGACCTGTGGATGCTGAGGAAG s panTro5.chr3 200148674 24 + 202621043 TGTCACCTGTGGATACTGAGGAAG i panTro5.chr3 T 4946 C 0 s panPan2.chrUn_NW_014024201v1 110744 24 + 190779 CGTGACCTGTGGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 288 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5223.000000 s hg38.chr3_KI270779v1_alt 158907 30 + 205312 TGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200148698 30 + 202621043 CGTCGGTGACAGGAAGATGGGTGCTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110480 30 + 190779 CGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 288 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20553.000000 s hg38.chr3_KI270779v1_alt 158937 48 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAAGAAGAGAGGTGGCCTGAC s panTro5.chr3 200148728 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 48 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 57 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7640.000000 s hg38.chr3_KI270779v1_alt 158985 8 + 205312 CTGTGGAT s panTro5.chr3 200148776 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 I 3266 s panPan2.chrUn_NW_014024201v1 110558 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=31743.000000 s hg38.chr3_KI270779v1_alt 158993 47 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGA s panTro5.chr3 200152050 47 + 202621043 ACTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGACCTGTGGA i panTro5.chr3 I 3266 C 0 s panPan2.chrUn_NW_014024201v1 110566 47 + 190779 GCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 47 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 T 55 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7747.000000 s hg38.chr3_KI270779v1_alt 159040 41 + 205312 ACCTGAGGAACGGATGGTTACAGGAAGAGAGGTGGCGTGAC s panTro5.chr3 200152097 41 + 202621043 TACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110613 41 + 190779 TGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98695 55 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3210.000000 s hg38.chr3_KI270779v1_alt 159081 8 + 205312 CTGTGGAC s panTro5.chr3 200152138 8 + 202621043 CTGTAGAT i panTro5.chr3 C 0 T 3362 s panPan2.chrUn_NW_014024201v1 110654 8 + 190779 CTGGGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=21295.000000 s hg38.chr3_KI270779v1_alt 159089 48 + 205312 ACTGAGGAAGCGTCCGTGACAGGAAGAGGGGTGGCGTGTCCTGTGGAT s panTro5.chr3 200148784 48 + 202621043 AATGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGGCCTGTGGAT i panTro5.chr3 T 3362 C 0 s panPan2.chrUn_NW_014024201v1 110662 48 + 190779 ACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19781.000000 s hg38.chr3_KI270779v1_alt 159137 48 + 205312 GCTGAGGAAGTGTCGGTGACAAGAAGAGGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200148832 48 + 202621043 ACTGAGGACGGGCTGGTGACTGTAAGAGGGGTGGCGTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110710 48 + 190779 GGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3091.000000 s hg38.chr3_KI270779v1_alt 159185 14 + 205312 GCTGAGGAAGGGCT s panTro5.chr3 200148880 14 + 202621043 GCTGAGGAAGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 14 + 190779 ACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 144 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17178.000000 s hg38.chr3_KI270779v1_alt 159199 74 + 205312 AGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAAGGGTGGCCTGAC s panTro5.chr3 200148894 74 + 202621043 GGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACGGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110628 74 + 190779 AGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 T 144 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25482.000000 s hg38.chr3_KI270779v1_alt 159273 56 + 205312 CTGTGGATGCTGAGGAAGCATCAGTGACATGAAGAGGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200148968 56 + 202621043 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 56 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2630.000000 s hg38.chr3_KI270779v1_alt 159329 10 + 205312 GCTGAGGAAG s panTro5.chr3 200149024 10 + 202621043 GCTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 10 + 190779 ACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 192 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7742.000000 s hg38.chr3_KI270779v1_alt 159339 30 + 205312 TGTCAGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200149034 30 + 202621043 CTTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110576 30 + 190779 CGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 192 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17424.000000 s hg38.chr3_KI270779v1_alt 159369 24 + 205312 CTGTGGATGCTGAGGAAAGGCTGG s panTro5.chr3 200149064 24 + 202621043 CTGTGGATGCTGAGGAAGGGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 24 + 190779 CTGTGGATGCTGAGGAAGGGCTAG i panPan2.chrUn_NW_014024201v1 C 0 T 288 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 24 + 17725628 CTGTGGATGCCGAGGAGGTGCTGG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22868.000000 s hg38.chr3_KI270779v1_alt 159393 31 + 205312 TGACAGGAAGAGGGGTGACGTGACCTGTGGA s panTro5.chr3 200149088 31 + 202621043 TGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 31 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 288 C 0 s macFas5.chr2 98664 31 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479135 31 + 17725628 TCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 159424 1 + 205312 T s panTro5.chr3 200149119 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110373 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9385.000000 s hg38.chr3_KI270779v1_alt 159425 40 + 205312 GCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGCTGTCAC s panTro5.chr3 200149120 40 + 202621043 ACTGAGGAAGCGTCAGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=39817.000000 s hg38.chr3_KI270779v1_alt 159465 55 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGACGTGACCTGTGGA s panTro5.chr3 200149160 55 + 202621043 CTGTGGATACTGAGGAAGTGTCGGTGATAGGAAGAGGAGTGACGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 55 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 159520 1 + 205312 T s panTro5.chr3 200149215 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8454.000000 s hg38.chr3_KI270779v1_alt 159521 40 + 205312 GCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200149216 40 + 202621043 GCTGAGGAAGGGCTGGTGACAGGAAGATGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7039.000000 s hg38.chr3_KI270779v1_alt 159561 16 + 205312 CTGTGGAAGCTGAGGA s panTro5.chr3 200149256 16 + 202621043 CTGTGGATACGGAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 16 + 190779 CTGTGGATACTGAGGA i panPan2.chrUn_NW_014024201v1 C 0 I 432 s macFas5.chr2 98640 16 + 192460366 CTGTGGATGCTGAGAA i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16702.000000 s hg38.chr3_KI270779v1_alt 159577 40 + 205312 AAGGCCGGTAACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200149272 40 + 202621043 AGCGTCGGTGACAGGAAGAGGCGTGGTGCGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110958 40 + 190779 AAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 I 432 C 0 s macFas5.chr2 98656 40 + 192460366 AGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3792.000000 s hg38.chr3_KI270779v1_alt 159617 13 + 205312 GCTGAGGAAGGGC s panTro5.chr3 200149312 13 + 202621043 GCTGAGGAAGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110998 13 + 190779 GCTGAGGAAGGGC i panPan2.chrUn_NW_014024201v1 C 0 T 432 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10588.000000 s hg38.chr3_KI270779v1_alt 159630 49 + 205312 TAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATACTGAGGAAAGGCT s panTro5.chr3 200149325 49 + 202621043 TCGTGACAGGAAGTGAGGTGGTGTCACCTGTGGATACTGAGGAAGCGTC i panTro5.chr3 C 0 I 817 s panPan2.chrUn_NW_014024201v1 110579 49 + 190779 CAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCT i panPan2.chrUn_NW_014024201v1 T 432 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=338.000000 s hg38.chr3_KI270779v1_alt 159679 2 + 205312 GG s panTro5.chr3 200150191 2 + 202621043 GG i panTro5.chr3 I 817 C 0 s panPan2.chrUn_NW_014024201v1 110628 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 T 288 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5533.000000 s hg38.chr3_KI270779v1_alt 159681 24 + 205312 TGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200150193 24 + 202621043 TGACAGGAAGAGAGGTGGCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 24 + 190779 TGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 288 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20216.000000 s hg38.chr3_KI270779v1_alt 159705 48 + 205312 CTGTGGATGCTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200150217 48 + 202621043 CTTTGGATACTGAGGAAGTGACGGTGACAGGAAGAGAGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6206.000000 s hg38.chr3_KI270779v1_alt 159753 7 + 205312 CTGTGGA s panTro5.chr3 200150265 7 + 202621043 CTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 7 + 190779 CTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479159 7 + 17725628 CTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18017.000000 s hg38.chr3_KI270779v1_alt 159760 41 + 205312 TGCTGAGGAAGCGTCGGTGACAGGAAGAGGCGTGGCGTGAC s panTro5.chr3 200150272 41 + 202621043 TACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110421 41 + 190779 TACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98647 41 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22470.000000 s hg38.chr3_KI270779v1_alt 159801 48 + 205312 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200150313 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=33684.000000 s hg38.chr3_KI270779v1_alt 159849 48 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC s panTro5.chr3 200150361 48 + 202621043 CTGTGGATAATGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 48 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7303.000000 s hg38.chr3_KI270779v1_alt 159897 9 + 205312 CTGTGGATA s panTro5.chr3 200150409 9 + 202621043 CTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 9 + 190779 CTGTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 9 + 192460366 CTGTGAATA i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479111 9 + 17725628 CTGTGGATG i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=26960.000000 s hg38.chr3_KI270779v1_alt 159906 39 + 205312 CTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC s panTro5.chr3 200150418 39 + 202621043 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110567 39 + 190779 CTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479120 39 + 17725628 CCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7116.000000 s hg38.chr3_KI270779v1_alt 159945 8 + 205312 CTGTGGAT s panTro5.chr3 200150457 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=30905.000000 s hg38.chr3_KI270779v1_alt 159953 47 + 205312 GCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGACGTGACCTGTAGA s panTro5.chr3 200150465 47 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 47 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 47 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1332.000000 s hg38.chr3_KI270779v1_alt 160000 2 + 205312 TA s panTro5.chr3 200150512 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110661 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 s saiBol1.JH378146 479118 2 + 17725628 TG i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19269.000000 s hg38.chr3_KI270779v1_alt 160002 46 + 205312 CTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGA s panTro5.chr3 200150514 46 + 202621043 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110663 46 + 190779 CTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479120 46 + 17725628 CCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=13961.000000 s hg38.chr3_KI270779v1_alt 160048 63 + 205312 TGATGAGGAAGGGATGGTGACAGGAAGAGAGGTGGCGTGACCTCTGGATACTGAGGAAGTGTT s panTro5.chr3 200150560 63 + 202621043 TAATGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATACTGAGGAAGTGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 63 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9680.000000 s hg38.chr3_KI270779v1_alt 160111 41 + 205312 GGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATACTGAGG s panTro5.chr3 200150623 41 + 202621043 AGTGACAGGAAGATGAGTGACGTGACCTGTGGATACTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110724 41 + 190779 GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGG i panPan2.chrUn_NW_014024201v1 T 48 T 423 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=742.000000 s hg38.chr3_KI270779v1_alt 160152 9 + 205312 AAAGGCTGG s panTro5.chr3 200150664 9 + 202621043 AAGGGCTGG i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110765 423 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3194.000000 s hg38.chr3_KI270779v1_alt 160161 12 + 205312 TGACAGGAAGAG s panTro5.chr3 200150673 12 + 202621043 TGACAGGGAGAG i panTro5.chr3 C 0 T 720 s panPan2.chrUn_NW_014024201v1 110342 12 + 190779 TGACAGGAAGAG i panPan2.chrUn_NW_014024201v1 T 423 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=13821.000000 s hg38.chr3_KI270779v1_alt 160173 60 + 205312 GGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCTGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200149965 60 + 202621043 AGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAGGAGAGGTGGTGTCGC i panTro5.chr3 T 720 C 0 s panPan2.chrUn_NW_014024201v1 110354 60 + 190779 GGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=14160.000000 s hg38.chr3_KI270779v1_alt 160233 22 + 205312 CTGTGGATGCTGAGGAAGTGTC s panTro5.chr3 200150025 22 + 202621043 CTGTAGATAGTGAGGAAGTGTC i panTro5.chr3 C 0 I 1009 s panPan2.chrUn_NW_014024201v1 110414 22 + 190779 CTGTGGATACTGAGGAAGGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 22 + 192460366 CTGTGGATGCTGAGAAAGCACC i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 479111 22 + 17725628 CTGTGGATGCCGAGGAGGTGCT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=24479.000000 s hg38.chr3_KI270779v1_alt 160255 33 + 205312 GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200151056 33 + 202621043 GGTGACAGGAAGAGAGGTGGCCTGACCTTTGGA i panTro5.chr3 I 1009 C 0 s panPan2.chrUn_NW_014024201v1 110436 33 + 190779 GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98662 33 + 192460366 CGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479133 33 + 17725628 GGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270779v1_alt 160288 2 + 205312 TA s panTro5.chr3 200151089 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20230.000000 s hg38.chr3_KI270779v1_alt 160290 87 + 205312 CTGAGGAAGCGTCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200151091 87 + 202621043 CTGAGGAAGTGACGGTGACAGGAAGAGAGGTGGCATGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110471 87 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=24196.000000 s hg38.chr3_KI270779v1_alt 160377 51 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTGACCTG s panTro5.chr3 200151178 51 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 51 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 51 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 57 T 51 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19815.000000 s hg38.chr3_KI270779v1_alt 160428 93 + 205312 AGGATGCTGAGGAAGGGATGGTGACAGGAAGAGGCGTGGTGTCACCTGTTGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200151229 93 + 202621043 TGGATACTGAGGAAGGGCTGGTGACAGGAAGAGTGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTCACAGGAAGAGGGGTGCTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110609 93 + 190779 TGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=26443.000000 s hg38.chr3_KI270779v1_alt 160521 57 + 205312 CTGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATA s panTro5.chr3 200151322 57 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACTTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 57 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 51 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1318.000000 s hg38.chr3_KI270779v1_alt 160578 6 + 205312 CTGAGG s panTro5.chr3 200151379 6 + 202621043 ATGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110759 6 + 190779 CTGAGG i panPan2.chrUn_NW_014024201v1 C 0 T 384 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=31570.000000 s hg38.chr3_KI270779v1_alt 160584 129 + 205312 AAAGGCTGGTGACAGGAAGAGGCGTGGCGTGACCGGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200151385 129 + 202621043 AAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110381 129 + 190779 AAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 384 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=39530.000000 s hg38.chr3_KI270779v1_alt 160713 55 + 205312 CTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200151514 55 + 202621043 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 55 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=613.000000 s hg38.chr3_KI270779v1_alt 160768 2 + 205312 TA s panTro5.chr3 200151569 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110565 2 + 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8993.000000 s hg38.chr3_KI270779v1_alt 160770 39 + 205312 CTGAGGAAGTGTCGGTGACAGGAAGAGTCGTGGTGTCAC s panTro5.chr3 200151571 39 + 202621043 GTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110567 39 + 190779 CTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20004.000000 s hg38.chr3_KI270779v1_alt 160809 48 + 205312 CTGTGGATACTGAGGAAAGGCTGGTGAGAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200151610 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 48 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 57 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=25039.000000 s hg38.chr3_KI270779v1_alt 160857 56 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGAT s panTro5.chr3 200151658 56 + 202621043 CTGTGGATAATGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 56 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9692.000000 s hg38.chr3_KI270779v1_alt 160913 40 + 205312 GCCGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200151714 40 + 202621043 ACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110710 40 + 190779 GGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12635.000000 s hg38.chr3_KI270779v1_alt 160953 15 + 205312 CTGTGGATACTGAGG s panTro5.chr3 200151754 15 + 202621043 CTGTGGATACTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 15 + 190779 CTGTGGATACTGAGG i panPan2.chrUn_NW_014024201v1 C 0 T 423 s macFas5.chr2 98640 15 + 192460366 CTGTGGATGCTGAGA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 15 + 17725628 CTGTGGATGCCGAGG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1907.000000 s hg38.chr3_KI270779v1_alt 160968 9 + 205312 AAAAGCTGG s panTro5.chr3 200151769 9 + 202621043 AAGGGCTGG i panTro5.chr3 C 0 C 0 s macFas5.chr2 98655 9 + 192460366 AAGCACCCG i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479126 9 + 17725628 AGGTGCTGG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110765 423 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22215.000000 s hg38.chr3_KI270779v1_alt 160977 31 + 205312 TGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200151778 31 + 202621043 TGACAGTAAGAGCGGTGGCGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 31 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 423 C 0 s macFas5.chr2 98664 31 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479135 31 + 17725628 TCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=726.000000 s hg38.chr3_KI270779v1_alt 161008 2 + 205312 TA s panTro5.chr3 200151809 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110373 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9319.000000 s hg38.chr3_KI270779v1_alt 161010 39 + 205312 CTGAGGAAGTGTCGGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200151811 39 + 202621043 CTGAGGAAGGGCTCGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 39 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=41023.000000 s hg38.chr3_KI270779v1_alt 161049 55 + 205312 CTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200151850 55 + 202621043 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 55 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 57 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270779v1_alt 161104 2 + 205312 TA s panTro5.chr3 200151905 2 + 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17832.000000 s hg38.chr3_KI270779v1_alt 161106 41 + 205312 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCG s panTro5.chr3 200151907 41 + 202621043 CTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110471 41 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 41 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCT i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16065.000000 s hg38.chr3_KI270779v1_alt 161147 37 + 205312 GTGGATGCTGAGGAAGCGCCGGTGACAGGAAGAGTGC s panTro5.chr3 200151948 37 + 202621043 GTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110512 37 + 190779 GTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98642 37 + 192460366 GTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGG i macFas5.chr2 T 48 T 39 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23626.000000 s hg38.chr3_KI270779v1_alt 161184 105 + 205312 TGGTGTCACCTGTGGATGCTGAGGAAGGGATGGTGACATGAAGAGGGGTGGTGTGACCTGTAGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200151985 105 + 202621043 TGGTGTCACCTGTGGATACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGACCTGTGGATACTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110549 105 + 190779 TGTCGTGACCTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23274.000000 s hg38.chr3_KI270779v1_alt 161289 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTAGA s panTro5.chr3 200152090 55 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 55 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18533.000000 s hg38.chr3_KI270779v1_alt 161344 43 + 205312 TGCTGAGGAAGTGCTGGTGACAGGAACAGGGGTGGCGTGACCG s panTro5.chr3 200152145 43 + 202621043 TAGTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 43 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479118 43 + 17725628 TGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCT i saiBol1.JH378146 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7957.000000 s hg38.chr3_KI270779v1_alt 161387 16 + 205312 GTGGATGCTGAGGAAG s panTro5.chr3 200152188 16 + 202621043 GTGGATACTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110752 16 + 190779 GTGGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 192 s saiBol1.JH378146 479113 16 + 17725628 GTGGATGCCGAGGAGG i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16163.000000 s hg38.chr3_KI270779v1_alt 161403 37 + 205312 TGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200152204 37 + 202621043 TGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110576 37 + 190779 CGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 192 C 0 s saiBol1.JH378146 479129 37 + 17725628 TGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2715.000000 s hg38.chr3_KI270779v1_alt 161440 11 + 205312 TGCTGAGGAAG s panTro5.chr3 200152241 11 + 202621043 TGGTGAGGAAG i panTro5.chr3 C 0 T 960 s panPan2.chrUn_NW_014024201v1 110613 11 + 190779 TGCTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5602.000000 s hg38.chr3_KI270779v1_alt 161451 30 + 205312 GGCTAGTGACAGGAAGAGGCATGGTGTCAC s panTro5.chr3 200151292 30 + 202621043 CGTCGGTCACAGGAAGAGGGGTGCTGTCAC i panTro5.chr3 T 960 C 0 s panPan2.chrUn_NW_014024201v1 110624 30 + 190779 GGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4749.000000 s hg38.chr3_KI270779v1_alt 161481 10 + 205312 CTGTGGATAC s panTro5.chr3 200151322 10 + 202621043 CTGTGGATAC i panTro5.chr3 C 0 I 720 s panPan2.chrUn_NW_014024201v1 110654 10 + 190779 CTGGGGATAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 10 + 17725628 CTGTGGATGC i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4450.000000 s hg38.chr3_KI270779v1_alt 161491 11 + 205312 TGAGGAAGTGT s panTro5.chr3 200152052 11 + 202621043 TGAGGAAGGGC i panTro5.chr3 I 720 C 0 s panPan2.chrUn_NW_014024201v1 110664 11 + 190779 TGAGGAAGTGT i panPan2.chrUn_NW_014024201v1 C 0 I 336 s saiBol1.JH378146 479121 11 + 17725628 CGAGGAGGTGC i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9519.000000 s hg38.chr3_KI270779v1_alt 161502 20 + 205312 TGGTGACAGGAAGAGGGGTG s panTro5.chr3 200152063 20 + 202621043 TGGTGACAGGGAGAGAGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111011 20 + 190779 TGGTGACAGGAAGAGGGGTG i panPan2.chrUn_NW_014024201v1 I 336 T 336 s saiBol1.JH378146 479132 20 + 17725628 TGGTCACAGGAAGCGGGGTG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6078.000000 s hg38.chr3_KI270779v1_alt 161522 14 + 205312 GCCTGACCTGTGGA s panTro5.chr3 200152083 14 + 202621043 GTGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110695 14 + 190779 GCCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 336 C 0 s saiBol1.JH378146 479152 14 + 17725628 GCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2558.000000 s hg38.chr3_KI270779v1_alt 161536 14 + 205312 TGCCGAGGAAATGT s panTro5.chr3 200152097 14 + 202621043 TACTGAGGAAGCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 14 + 190779 TGGTGAGGAAGCGT i panPan2.chrUn_NW_014024201v1 C 0 T 144 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=16945.000000 s hg38.chr3_KI270779v1_alt 161550 75 + 205312 CGGTGACAGGAAGACGGGTGGTGTCACCTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200152111 75 + 202621043 CGGTGACAGGAAGAGAGGTGGTGTCACCTGTAGATAGTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110579 75 + 190779 CAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 144 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10406.000000 s hg38.chr3_KI270779v1_alt 161625 24 + 205312 CTGTGGATGCTGAGGAAGTGTTGG s panTro5.chr3 200152186 24 + 202621043 CTGTGGATACTGAGGAAGTGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 24 + 190779 CTGGGGATACTGAGGAAGTGTCCG i panPan2.chrUn_NW_014024201v1 C 0 T 336 s saiBol1.JH378146 479111 24 + 17725628 CTGTGGATGCCGAGGAGGTGCTGG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=13767.000000 s hg38.chr3_KI270779v1_alt 161649 31 + 205312 TGACAGGAAGAGGGGTGGCCTGACCTGTGGA s panTro5.chr3 200152210 31 + 202621043 TGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 31 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 336 C 0 s saiBol1.JH378146 479135 31 + 17725628 TCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6023.000000 s hg38.chr3_KI270779v1_alt 161680 26 + 205312 TGCCGAGGAAATGTCGGTGACAGGAA s panTro5.chr3 200152241 26 + 202621043 TGGTGAGGAAGCGTCGGTGACAGGAA i panTro5.chr3 C 0 T 2689 s panPan2.chrUn_NW_014024201v1 110373 26 + 190779 TACTGAGGAAGCGTCGGTGACAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8213.000000 s hg38.chr3_KI270779v1_alt 161706 36 + 205312 GACGGGTGGTGTCACCTGTGGAAGCTGAGGAAAGGC s panTro5.chr3 200149578 36 + 202621043 GAGGGGTGGTGTCACCTGTGGACACTGAGGAAGCGT i panTro5.chr3 T 2689 C 0 s panPan2.chrUn_NW_014024201v1 110399 36 + 190779 GAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGC i panPan2.chrUn_NW_014024201v1 C 0 I 288 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12714.000000 s hg38.chr3_KI270779v1_alt 161742 44 + 205312 CGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA s panTro5.chr3 200149614 44 + 202621043 CGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110723 44 + 190779 CGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 I 288 T 288 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5807.000000 s hg38.chr3_KI270779v1_alt 161786 31 + 205312 GTGTCGGTGACAGGCACAGGGGTGGTGTCAC s panTro5.chr3 200149658 31 + 202621043 ATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110479 31 + 190779 GCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 288 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=22803.000000 s hg38.chr3_KI270779v1_alt 161817 55 + 205312 CTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200149689 55 + 202621043 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 55 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19986.000000 s hg38.chr3_KI270779v1_alt 161872 89 + 205312 TGCTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATGATGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTCAC s panTro5.chr3 200149744 89 + 202621043 TACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGACCTGTGGATACTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110565 89 + 190779 TGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98679 39 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8185.000000 s hg38.chr3_KI270779v1_alt 161961 18 + 205312 CTGTGTATGCTGAGGAAG s panTro5.chr3 200149833 18 + 202621043 CTGTGGATACTGAGGAAG i panTro5.chr3 C 0 T 192 s panPan2.chrUn_NW_014024201v1 110654 18 + 190779 CTGGGGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 18 + 192460366 CTGTGGATGCTGAGAAAG i macFas5.chr2 T 39 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12533.000000 s hg38.chr3_KI270779v1_alt 161979 30 + 205312 TGTCGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200149659 30 + 202621043 TGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panTro5.chr3 T 192 C 0 s panPan2.chrUn_NW_014024201v1 110672 30 + 190779 TGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 T 384 s macFas5.chr2 98658 30 + 192460366 CACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23387.000000 s hg38.chr3_KI270779v1_alt 162009 56 + 205312 CTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGAT s panTro5.chr3 200149689 56 + 202621043 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110318 56 + 190779 CTGTGGAAGCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 T 384 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=32138.000000 s hg38.chr3_KI270779v1_alt 162065 136 + 205312 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTAACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200149745 136 + 202621043 ACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGACCTGTGGATACTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 136 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=30780.000000 s hg38.chr3_KI270779v1_alt 162201 48 + 205312 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGCGGTGGCCTGAC s panTro5.chr3 200149881 48 + 202621043 CTGTAGATAGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 48 + 190779 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=17318.000000 s hg38.chr3_KI270779v1_alt 162249 24 + 205312 CTGTGGATGCTGAGGAAGTGTCGG s panTro5.chr3 200149929 24 + 202621043 CTGTGGATACTGAGGAAGCGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 24 + 190779 CTGTGGATGCTGAGGAAGCGTCAG i panPan2.chrUn_NW_014024201v1 C 0 T 240 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 24 + 17725628 CTGTGGATGCCGAGGAGGTGCTGG i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23440.000000 s hg38.chr3_KI270779v1_alt 162273 31 + 205312 TGACAGGAAGAGGGGTGGTGTGACCTGTGGA s panTro5.chr3 200149953 31 + 202621043 TGACAGGAAGAGAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 31 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 240 C 0 s macFas5.chr2 98664 31 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479135 31 + 17725628 TCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270779v1_alt 162304 1 + 205312 T s panTro5.chr3 200149984 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110373 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8906.000000 s hg38.chr3_KI270779v1_alt 162305 40 + 205312 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200149985 40 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAGGAGAGGTGGTGTCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=33427.000000 s hg38.chr3_KI270779v1_alt 162345 48 + 205312 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200150025 48 + 202621043 CTGTAGATAGTGAGGAAGTGTCGGTGACAGTAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 48 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7116.000000 s hg38.chr3_KI270779v1_alt 162393 8 + 205312 CTGTGGAT s panTro5.chr3 200150073 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 54 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19908.000000 s hg38.chr3_KI270779v1_alt 162401 47 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCGGTGGA s panTro5.chr3 200150081 47 + 202621043 ACTGAGGAAGTGTCGGTGACAAGAAGAGTGGTGGCGTGACCTGTAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 47 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 54 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8028.000000 s hg38.chr3_KI270779v1_alt 162448 41 + 205312 TGCTGAGGAAGGGCTGGTGACATGAAGAGGGTTGGCGTGAC s panTro5.chr3 200150128 41 + 202621043 TGGTGAGGAAGCGTCAGTGACAGGAAGAGGGTTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110517 41 + 190779 TACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 54 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20806.000000 s hg38.chr3_KI270779v1_alt 162489 50 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCG s panTro5.chr3 200150169 50 + 202621043 CTGTGGATGCTGAGGACGGGCTGGTGACAGGAAGAGAGGTGGCCTGACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 50 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCT i panPan2.chrUn_NW_014024201v1 C 0 T 288 s saiBol1.JH378146 479111 50 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 54 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3440.000000 s hg38.chr3_KI270779v1_alt 162539 5 + 205312 GTGGA s panTro5.chr3 200150219 5 + 202621043 TTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110320 5 + 190779 GTGGA i panPan2.chrUn_NW_014024201v1 T 288 C 0 s macFas5.chr2 98642 5 + 192460366 GTGGA i macFas5.chr2 T 54 C 0 s saiBol1.JH378146 479161 5 + 17725628 GTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12764.000000 s hg38.chr3_KI270779v1_alt 162544 37 + 205312 TGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCG s panTro5.chr3 200150224 37 + 202621043 TACTGAGGAAGTGACGGTGACAGGAAGAGAGGTGGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110325 37 + 190779 AGCTGAGGTAGCACTGCTGACAGGAAGAGGGGTGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98647 37 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCG i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2920.000000 s hg38.chr3_KI270779v1_alt 162581 4 + 205312 TGAC s panTro5.chr3 200150261 4 + 202621043 TGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110362 4 + 190779 TCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914255 4 + 123690457 TGAC i nomLeu3.chr11 M 3534 C 0 s macFas5.chr2 98684 4 + 192460366 TGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=8303.000000 s hg38.chr3_KI270779v1_alt 162585 10 + 205312 CTGTGGATAT s panTro5.chr3 200150265 10 + 202621043 CTGTGGATAC i panTro5.chr3 C 0 I 1057 s panPan2.chrUn_NW_014024201v1 110366 10 + 190779 CTGTGGATAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914259 10 + 123690457 CTGTGGATGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 10 + 192460366 CTGTGGATGC i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=22721.000000 s hg38.chr3_KI270779v1_alt 162595 29 + 205312 TGAGGAAGTGTCGGTGACAGGAAGAGGGG s panTro5.chr3 200151332 29 + 202621043 TGAGGAAGCGTCGGTGACAGGAAGAGGGG i panTro5.chr3 I 1057 C 0 s panPan2.chrUn_NW_014024201v1 110376 29 + 190779 TGAGGAAGCGTCGGTGACAGGAAGAGGGG i panPan2.chrUn_NW_014024201v1 C 0 T 48 s nomLeu3.chr11 120914269 29 + 123690457 TGAGGACGTGTCAGTGACAGGAAGAGGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98650 29 + 192460366 TGAGAAAGCACCCGTGACAGGAAGAGTGG i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=6043.000000 s hg38.chr3_KI270779v1_alt 162624 9 + 205312 TGGCGTGAC s panTro5.chr3 200151361 9 + 202621043 TGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110357 9 + 190779 TGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 48 C 0 s nomLeu3.chr11 120914298 9 + 123690457 TGGTGTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98679 9 + 192460366 TAGCGTGAC i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=50752.000000 s hg38.chr3_KI270779v1_alt 162633 48 + 205312 CTATGGATGCTGAGGAAGTGTCGGTGACAGGAAGAAGGGTGGCGTGAC s panTro5.chr3 200151370 48 + 202621043 TTGTGGATAATGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914307 48 + 123690457 CTGTGGATGCTGAGGACGTGTCAGTGACAGGAAGAGGGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=25631.000000 s hg38.chr3_KI270779v1_alt 162681 24 + 205312 CTGTGGATGCTGAGGAAGTGTCGG s panTro5.chr3 200151418 24 + 202621043 CTGTGGATACTGAGGAAGTGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 24 + 190779 CTGTGGATACTGAGGAAGGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 T 96 s nomLeu3.chr11 120914355 24 + 123690457 CTGTGGATGTTGAGGAAGTGCTGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 24 + 17725628 CTGTGGATGCCGAGGAGGTGCTGG i saiBol1.JH378146 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=36013.000000 s hg38.chr3_KI270779v1_alt 162705 31 + 205312 TGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200151442 31 + 202621043 TGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 31 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 96 C 0 s nomLeu3.chr11 120914379 31 + 123690457 TGACAGGAGGAGAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98664 31 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479135 31 + 17725628 TCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=910.000000 s hg38.chr3_KI270779v1_alt 162736 1 + 205312 T s panTro5.chr3 200151473 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110373 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914410 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=29581.000000 s hg38.chr3_KI270779v1_alt 162737 40 + 205312 GCTGAGGAAGTGTCGGTGTCAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200151474 40 + 202621043 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110374 40 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914411 40 + 123690457 GCTGAGGACGTGTCAGTGACAGGAAGAGGGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=61094.000000 s hg38.chr3_KI270779v1_alt 162777 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200151514 55 + 202621043 CTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 55 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914451 55 + 123690457 CTGTGGATGTTGAGGAAGTGCTGATGACAGGAAGAGAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=910.000000 s hg38.chr3_KI270779v1_alt 162832 1 + 205312 T s panTro5.chr3 200151569 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914506 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=58469.000000 s hg38.chr3_KI270779v1_alt 162833 123 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGA s panTro5.chr3 200151570 123 + 202621043 GGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATAATGAGGAAGCGTCGGTGACAGGAAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 123 + 190779 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914507 123 + 123690457 GCTGAGGAAGTGTCACTGACAGGAAGAGGGGTGGTGTGACCTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATGCTGAGGAAGCGCTGGTGACAGGAAGA i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=2892.000000 s hg38.chr3_KI270779v1_alt 162956 13 + 205312 GGCGTGGTGTCAC s panTro5.chr3 200151693 13 + 202621043 GGGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110593 13 + 190779 GGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=20260.000000 s hg38.chr3_KI270779v1_alt 162969 48 + 205312 CTGTGGATACTGAGGAAAGGCTGGTGAGAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200151706 48 + 202621043 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 48 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=37601.000000 s hg38.chr3_KI270779v1_alt 163017 56 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTAGCGTGACCTGTGGAC s panTro5.chr3 200151754 56 + 202621043 CTGTGGATACTGAGGAAGGGCTGGTGACAGTAAGAGCGGTGGCGTCACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 56 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 56 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAAC i saiBol1.JH378146 T 55 T 52 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=67.000000 s hg38.chr3_KI270779v1_alt 163073 1 + 205312 A s panTro5.chr3 200151810 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110710 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98696 1 + 192460366 A i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 52 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=16633.000000 s hg38.chr3_KI270779v1_alt 163074 39 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200151811 39 + 202621043 CTGAGGAAGGGCTCGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110711 39 + 190779 GTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 52 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=8476.000000 s hg38.chr3_KI270779v1_alt 163113 17 + 205312 CTGTGGACACTGAGGAA s panTro5.chr3 200151850 17 + 202621043 CTGTGGACACTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 17 + 190779 CTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 240 s macFas5.chr2 98640 17 + 192460366 CTGTGGATGCTGAGAAA i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 52 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=17879.000000 s hg38.chr3_KI270779v1_alt 163130 40 + 205312 GCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACA s panTro5.chr3 200151867 40 + 202621043 GCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110527 40 + 190779 ATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 T 240 C 0 s macFas5.chr2 98657 40 + 192460366 GCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 52 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=18370.000000 s hg38.chr3_KI270779v1_alt 163170 42 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTG s panTro5.chr3 200151907 42 + 202621043 CTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110567 42 + 190779 CTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 42 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 48 T 51 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 52 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=-155.000000 s hg38.chr3_KI270779v1_alt 163212 1 + 205312 A s panTro5.chr3 200151949 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110609 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 52 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=17743.000000 s hg38.chr3_KI270779v1_alt 163213 44 + 205312 GGATGCTGAGGAAGGGATGGTGACAGGAAGCGAGGTGGCGTGAC s panTro5.chr3 200151950 44 + 202621043 GGATGGTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110610 44 + 190779 GGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479115 44 + 17725628 GGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 52 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=4000.000000 s hg38.chr3_KI270779v1_alt 163257 5 + 205312 CTGTG s panTro5.chr3 200151994 5 + 202621043 CTGTG i panTro5.chr3 C 0 I 3 s panPan2.chrUn_NW_014024201v1 110654 5 + 190779 CTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 5 + 192460366 CTGTG i macFas5.chr2 T 51 C 0 s saiBol1.JH378146 479159 5 + 17725628 CTGTG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=680.000000 s hg38.chr3_KI270779v1_alt 163262 3 + 205312 AAC s panPan2.chrUn_NW_014024201v1 110659 3 + 190779 GAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98645 3 + 192460366 GAT i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479164 3 + 17725628 AAC i saiBol1.JH378146 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C e panTro5.chr3 200151999 3 + 202621043 I a score=20726.000000 s hg38.chr3_KI270779v1_alt 163265 49 + 205312 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACA s panTro5.chr3 200152002 49 + 202621043 ACTGAGGAAGTGTCAGTGACAGGAAGATGAGTGACGTGACCTGTGGATA i panTro5.chr3 I 3 C 0 s panPan2.chrUn_NW_014024201v1 110662 49 + 190779 ACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98648 49 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=16081.000000 s hg38.chr3_KI270779v1_alt 163314 39 + 205312 CTGACGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro5.chr3 200152051 39 + 202621043 CTGAGGAAGGGCTGGTGACAGGGAGAGAGGTGGTGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110711 39 + 190779 GTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=14505.000000 s hg38.chr3_KI270779v1_alt 163353 22 + 205312 CTGTGGATGCTGAGGAAGGGCT s panTro5.chr3 200152090 22 + 202621043 CTGTGGATACTGAGGAAGCGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 22 + 190779 CTGTGGATACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 336 s macFas5.chr2 98640 22 + 192460366 CTGTGGATGCTGAGAAAGCACC i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 22 + 17725628 CTGTGGATGCCGAGGAGGTGCT i saiBol1.JH378146 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=18020.000000 s hg38.chr3_KI270779v1_alt 163375 26 + 205312 GGTGACATGAAGAGGGGTGGCGTGAC s panTro5.chr3 200152112 26 + 202621043 GGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110436 26 + 190779 GGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 336 C 0 s macFas5.chr2 98662 26 + 192460366 CGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479133 26 + 17725628 GGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=40379.000000 s hg38.chr3_KI270779v1_alt 163401 55 + 205312 CTGTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro5.chr3 200152138 55 + 202621043 CTGTAGATAGTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 55 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 48 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=546.000000 s hg38.chr3_KI270779v1_alt 163456 1 + 205312 T s panTro5.chr3 200152193 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110517 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=9651.000000 s hg38.chr3_KI270779v1_alt 163457 40 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200152194 40 + 202621043 ACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110518 40 + 190779 ACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=39335.000000 s hg38.chr3_KI270779v1_alt 163497 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGA s panTro5.chr3 200152234 55 + 202621043 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGGGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 55 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=546.000000 s hg38.chr3_KI270779v1_alt 163552 1 + 205312 T s panTro5.chr3 200152289 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110613 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=9700.000000 s hg38.chr3_KI270779v1_alt 163553 40 + 205312 GCTGAGTAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200152290 40 + 202621043 GCTGAGGAAGGGCTGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 40 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=31330.000000 s hg38.chr3_KI270779v1_alt 163593 48 + 205312 CTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCATGAC s panTro5.chr3 200152330 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 48 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=40485.000000 s hg38.chr3_KI270779v1_alt 163641 55 + 205312 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200152378 55 + 202621043 CTGTGGATACTGGGGAAGTGTCGGTGACAGGAAGAAAGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 55 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 48 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=546.000000 s hg38.chr3_KI270779v1_alt 163696 1 + 205312 T s panTro5.chr3 200152433 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110757 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=1938.000000 s hg38.chr3_KI270779v1_alt 163697 14 + 205312 GCTGAGGAAGGGCT s panTro5.chr3 200152434 14 + 202621043 GGTGAGGAAGCGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 14 + 190779 ACTGAGGAAGGCTT i panPan2.chrUn_NW_014024201v1 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=10340.000000 s hg38.chr3_KI270779v1_alt 163711 43 + 205312 GGTGACATGAAGAGAGGTGGTGTGACGTGTGGATAATGAGGAA s panTro5.chr3 200152448 43 + 202621043 GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110724 43 + 190779 GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 T 48 T 432 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=28398.000000 s hg38.chr3_KI270779v1_alt 163754 127 + 205312 GCATTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGGAGTGTCGGTGACAGGTAGAGGGGTGGTGTGACCTGTAGATGCTGAGGAAGGGCTGGTGACAGGAAGACGGGTGGTGTCAC s panTro5.chr3 200152491 127 + 202621043 GCGTCAGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGGTGTGGAAGCATCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110335 127 + 190779 GCACTGCTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 432 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=10348.000000 s hg38.chr3_KI270779v1_alt 163881 24 + 205312 CTGTGGATACTGACGAAGCGTCGG s panTro5.chr3 200152618 24 + 202621043 CTGTGGATACTGAGGAAGTGTCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 24 + 190779 CTGTGGATACTGAGGAAGCGTCGG i panPan2.chrUn_NW_014024201v1 C 0 T 144 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=14723.000000 s hg38.chr3_KI270779v1_alt 163905 33 + 205312 TGACAAGAAGAGGGGTGGTGTGACCTGTGGATA s panTro5.chr3 200152642 33 + 202621043 TGACAGGAAGAGGAGTAACGTGACCTGTGGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 33 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panPan2.chrUn_NW_014024201v1 T 144 C 0 s macFas5.chr2 98664 33 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=3725.000000 s hg38.chr3_KI270779v1_alt 163938 18 + 205312 CTGAGGAAGTGTCGGTGC s panTro5.chr3 200152675 18 + 202621043 CTGAGGAAGGGCTGGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 18 + 190779 CTGAGGAAGCGTCGGTGA i panPan2.chrUn_NW_014024201v1 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=6084.000000 s hg38.chr3_KI270779v1_alt 163956 21 + 205312 CAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200152693 21 + 202621043 CAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110345 21 + 190779 CAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 55 - 74750902 T e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=56874.000000 s hg38.chr3_KI270779v1_alt 163977 55 + 205312 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGA s panTro5.chr3 200152714 55 + 202621043 CTGTGGATACTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGCATGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 55 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 57 C 0 s calJac3.chr17 957014 55 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 T 55 I 1048 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=546.000000 s hg38.chr3_KI270779v1_alt 164032 1 + 205312 T s panTro5.chr3 200152769 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110421 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=7612.000000 s hg38.chr3_KI270779v1_alt 164033 38 + 205312 GCCGAGGAAACGTTGGTGACAGGAAGACGGGTGGTGTC s panTro5.chr3 200152770 38 + 202621043 ACTGAGGAAGCATCGGTGACAGGAAGAGAGGTGGTGTC i panTro5.chr3 C 0 T 1200 s panPan2.chrUn_NW_014024201v1 110422 38 + 190779 ACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=573.000000 s hg38.chr3_KI270779v1_alt 164071 2 + 205312 AC s panTro5.chr3 200151608 2 + 202621043 AC i panTro5.chr3 T 1200 C 0 s panPan2.chrUn_NW_014024201v1 110460 2 + 190779 AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=19112.000000 s hg38.chr3_KI270779v1_alt 164073 46 + 205312 CTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGATGGGTGGCGTG s panTro5.chr3 200151610 46 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTC i panTro5.chr3 C 0 I 1152 s panPan2.chrUn_NW_014024201v1 110462 46 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 46 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTG i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=5337.000000 s hg38.chr3_KI270779v1_alt 164119 10 + 205312 ACCTGTGGAT s panTro5.chr3 200152808 10 + 202621043 ACCTGTGGAT i panTro5.chr3 I 1152 C 0 s panPan2.chrUn_NW_014024201v1 110508 10 + 190779 ACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98686 10 + 192460366 ACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=9389.000000 s hg38.chr3_KI270779v1_alt 164129 40 + 205312 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200152818 40 + 202621043 ACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTAGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110518 40 + 190779 ACTGAGGAAATGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=24466.000000 s hg38.chr3_KI270779v1_alt 164169 51 + 205312 CTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTG s panTro5.chr3 200152858 51 + 202621043 CTGTGGATGCTGAGGAAGCGTCGGTGACAGCAAGAGGGGTGGTGTCACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 51 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 51 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 56 T 51 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=20950.000000 s hg38.chr3_KI270779v1_alt 164220 93 + 205312 AGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200152909 93 + 202621043 TGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGAGGTGGCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110609 93 + 190779 TGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=23576.000000 s hg38.chr3_KI270779v1_alt 164313 51 + 205312 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTG s panTro5.chr3 200153002 51 + 202621043 CTGTGGATACTGAGGAAGCGTCAGTGACTGGAATAGGGGTGGCGTGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 51 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 51 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 51 T 51 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=3621.000000 s hg38.chr3_KI270779v1_alt 164364 15 + 205312 AGGATGCTGAGGAAG s panTro5.chr3 200153053 15 + 202621043 TGGATGCTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110753 15 + 190779 TGGATACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 384 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=7053.000000 s hg38.chr3_KI270779v1_alt 164379 30 + 205312 GGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200153068 30 + 202621043 GGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110384 30 + 190779 CGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 384 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=41303.000000 s hg38.chr3_KI270779v1_alt 164409 56 + 205312 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGAC s panTro5.chr3 200153098 56 + 202621043 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCATGACCTGCGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 56 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 51 C 0 s saiBol1.JH378146 479111 56 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAAC i saiBol1.JH378146 T 55 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=180.000000 s hg38.chr3_KI270779v1_alt 164465 1 + 205312 A s panTro5.chr3 200153154 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110470 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98696 1 + 192460366 A i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=14562.000000 s hg38.chr3_KI270779v1_alt 164466 57 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAA s panTro5.chr3 200153155 57 + 202621043 CTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAG i panTro5.chr3 C 0 T 960 s panPan2.chrUn_NW_014024201v1 110471 57 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATACTGAGGAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=6086.000000 s hg38.chr3_KI270779v1_alt 164523 30 + 205312 GGCTGGTGACAGGAAGAGGGGTGGCCTGTC s panTro5.chr3 200152252 30 + 202621043 CGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro5.chr3 T 960 C 0 s panPan2.chrUn_NW_014024201v1 110528 30 + 190779 TGTCGGTGACAGGAAGAGAGGTGTCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=20178.000000 s hg38.chr3_KI270779v1_alt 164553 48 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAAGAAGAGGGATGGCGTGAC s panTro5.chr3 200152282 48 + 202621043 CTGGGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110558 48 + 190779 CTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 57 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=20677.000000 s hg38.chr3_KI270779v1_alt 164601 48 + 205312 CTGTGGATGCTGAGGAAGGGCCGGTGACAGGAAGAGGGGTGGCCTGAC s panTro5.chr3 200152330 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 48 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479167 56 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=33664.000000 s hg38.chr3_KI270779v1_alt 164649 48 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200152378 48 + 202621043 CTGTGGATACTGGGGAAGTGTCGGTGACAGGAAGAAAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 48 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479111 48 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=6206.000000 s hg38.chr3_KI270779v1_alt 164697 7 + 205312 CTGTGGA s panTro5.chr3 200152426 7 + 202621043 CTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 7 + 190779 CTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479159 7 + 17725628 CTGTGAA i saiBol1.JH378146 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=35279.000000 s hg38.chr3_KI270779v1_alt 164704 48 + 205312 TGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200152433 48 + 202621043 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 48 + 190779 TGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98647 48 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479118 48 + 17725628 TGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 48 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=546.000000 s hg38.chr3_KI270779v1_alt 164752 1 + 205312 T s panTro5.chr3 200152481 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110757 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=2330.000000 s hg38.chr3_KI270779v1_alt 164753 9 + 205312 GCTGAGGAA s panTro5.chr3 200152482 9 + 202621043 GCTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 9 + 190779 ACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 192 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=17930.000000 s hg38.chr3_KI270779v1_alt 164762 79 + 205312 GTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCCC s panTro5.chr3 200152491 79 + 202621043 GCGTCAGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGGTGTGGAAGCATCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110575 79 + 190779 GCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 192 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=19650.000000 s hg38.chr3_KI270779v1_alt 164841 48 + 205312 CTGTGGATAATGAGGAAGCATCGGTGACATGAAGAGCGGTGGCGTGAC s panTro5.chr3 200152570 48 + 202621043 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 48 + 190779 CTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=25895.000000 s hg38.chr3_KI270779v1_alt 164889 57 + 205312 CTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGATA s panTro5.chr3 200152618 57 + 202621043 CTGTGGATACTGAGGAAGTGTCAGTGACAGGAAGAGGAGTAACGTGACCTGTGGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 57 + 190779 CTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=4191.000000 s hg38.chr3_KI270779v1_alt 164946 8 + 205312 CTGAGGAA s panTro5.chr3 200152675 8 + 202621043 CTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110759 8 + 190779 CTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 192 s macFas5.chr2 98649 8 + 192460366 CTGAGAAA i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=16524.000000 s hg38.chr3_KI270779v1_alt 164954 39 + 205312 GCGTCGGTGACAAGAAGAGGGGTGGCGTGACCTGTGGAT s panTro5.chr3 200152683 39 + 202621043 GGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110575 39 + 190779 GCGTCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 T 192 C 0 s macFas5.chr2 98657 39 + 192460366 GCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=32744.000000 s hg38.chr3_KI270779v1_alt 164993 151 + 205312 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGTCCTGACCTGTGGATGCTGAGGAAGTATCGGTGACAGGAAGCGGCGTGGTGTCACCAGTGGATGCTGAGG s panTro5.chr3 200152722 151 + 202621043 ACTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGCATGACCTGTGGATACTGAGGAAGCATCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTAGTGTCACCTGTGGATGCTGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110614 151 + 190779 GCTGAGGAAGGGCTAGTGACAGGAAGAGAGGTGGTGTCACCTGGGGATACTGAGGAAGTGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGG i panPan2.chrUn_NW_014024201v1 C 0 T 423 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=264.000000 s hg38.chr3_KI270779v1_alt 165144 9 + 205312 AAAGGCTGG s panTro5.chr3 200152873 9 + 202621043 AAGCGTCGG i panTro5.chr3 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110765 423 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=16372.000000 s hg38.chr3_KI270779v1_alt 165153 72 + 205312 TGACAGGAAGAGGGGTGGCCTGTCCTGTAGATACTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCATGAC s panTro5.chr3 200152882 72 + 202621043 TGACAGCAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGCGTCAGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 72 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 423 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=21715.000000 s hg38.chr3_KI270779v1_alt 165225 48 + 205312 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro5.chr3 200152954 48 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGAGGTGGCCTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 48 + 190779 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=8589.000000 s hg38.chr3_KI270779v1_alt 165273 17 + 205312 CTGTGGACACTGAGGAA s panTro5.chr3 200153002 17 + 202621043 CTGTGGATACTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110462 17 + 190779 CTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 I 289 s macFas5.chr2 98640 17 + 192460366 CTGTGGATGCTGAGAAA i macFas5.chr2 T 48 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=15489.000000 s hg38.chr3_KI270779v1_alt 165290 40 + 205312 GCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGGTA s panTro5.chr3 200153019 40 + 202621043 GCGTCAGTGACTGGAATAGGGGTGGCGTGACCTGTGGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110768 40 + 190779 GCTTCGGGGACAGGAAGAGAGGTGTCATGACCTGTGGATG i panPan2.chrUn_NW_014024201v1 I 289 C 0 s macFas5.chr2 98657 40 + 192460366 GCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=19421.000000 s hg38.chr3_KI270779v1_alt 165330 42 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTG s panTro5.chr3 200153059 42 + 202621043 CTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110808 42 + 190779 CTGAGGAAGCGTTGGTGACAGGAAGAGGGGTGGCATGACCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 42 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTG i macFas5.chr2 T 48 T 51 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=9700.000000 s hg38.chr3_KI270779v1_alt 165372 45 + 205312 AGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro5.chr3 200153101 45 + 202621043 TGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110850 45 + 190779 TGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98691 51 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=39136.000000 s hg38.chr3_KI270779v1_alt 165417 55 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGA s panTro5.chr3 200153146 55 + 202621043 CTGCGGATGCTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110895 55 + 190779 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 51 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=613.000000 s hg38.chr3_KI270779v1_alt 165472 2 + 205312 TA s panTro5.chr3 200153201 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110950 2 + 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 57 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=2592.000000 s hg38.chr3_KI270779v1_alt 165474 9 + 205312 CTGAGGAAG s panTro5.chr3 200153203 9 + 202621043 CTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110952 9 + 190779 CTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 T 289 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=14862.000000 s hg38.chr3_KI270779v1_alt 165483 78 + 205312 CGTCGGTGACATGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGTTAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200153212 78 + 202621043 GGCTGTTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACGGGAAGAGCCGTGGCGTGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110672 78 + 190779 TGTCCGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGGTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 T 289 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98697 57 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=8842.000000 s hg38.chr3_KI270779v1_alt 165561 17 + 205312 CTGTGGATACTGAGGAA s panTro5.chr3 200153290 17 + 202621043 CTGTGGATGCTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 17 + 190779 CTGTGGATACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 425 s macFas5.chr2 98640 17 + 192460366 CTGTGGATGCTGAGAAA i macFas5.chr2 T 57 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=414.000000 s hg38.chr3_KI270779v1_alt 165578 7 + 205312 GCGTCGG s panTro5.chr3 200153307 7 + 202621043 GGGCTGG i panTro5.chr3 C 0 C 0 s macFas5.chr2 98657 7 + 192460366 GCACCCG i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110767 425 + 190779 T e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=15518.000000 s hg38.chr3_KI270779v1_alt 165585 33 + 205312 TGACAAGAAGAGAGGTGGCGTGACCTGTGGACA s panTro5.chr3 200153314 33 + 202621043 TGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 33 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATA i panPan2.chrUn_NW_014024201v1 T 425 C 0 s macFas5.chr2 98664 33 + 192460366 TGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=19140.000000 s hg38.chr3_KI270779v1_alt 165618 47 + 205312 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTGACCTGAAGAT s panTro5.chr3 200153347 47 + 202621043 CTGAGGAAGGTCTGGTGACAGGAAGAGCGGTGGCATGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110375 47 + 190779 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=3141.000000 s hg38.chr3_KI270779v1_alt 165665 16 + 205312 GCTGAGGAAGGGATGG s panTro5.chr3 200153394 16 + 202621043 GCTGAGGAAGCGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110422 16 + 190779 ACTGAGGAAGGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 T 96 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=5712.000000 s hg38.chr3_KI270779v1_alt 165681 24 + 205312 TGACAGGAAGAGAGGTGGTGTCAC s panTro5.chr3 200153410 24 + 202621043 TGACAGGAAGAGGGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 24 + 190779 TGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 T 96 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=23478.000000 s hg38.chr3_KI270779v1_alt 165705 48 + 205312 CTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro5.chr3 200153434 48 + 202621043 CTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 48 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=7116.000000 s hg38.chr3_KI270779v1_alt 165753 8 + 205312 CTGTGGAT s panTro5.chr3 200153482 8 + 202621043 CTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 8 + 190779 CTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 56 s saiBol1.JH378146 479111 8 + 17725628 CTGTGGAT i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=21330.000000 s hg38.chr3_KI270779v1_alt 165761 47 + 205312 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGATGGCCTGACCTGTGGA s panTro5.chr3 200153490 47 + 202621043 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110422 47 + 190779 ACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s saiBol1.JH378146 479119 47 + 17725628 GCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=3214.000000 s hg38.chr3_KI270779v1_alt 165808 17 + 205312 TGCCGAGGAAACGTCGG s panTro5.chr3 200153537 17 + 202621043 TGCTGAGGAAGGGCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 17 + 190779 TACTGAGGAAGCGTCGG i panPan2.chrUn_NW_014024201v1 C 0 T 144 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=10893.000000 s hg38.chr3_KI270779v1_alt 165825 50 + 205312 TGACAGGAAGACGGGTGGTGTCATCTGTGGAAGCTGAAGAAAGGCCGGTG s panTro5.chr3 200153554 50 + 202621043 TGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGGGCTGGTG i panTro5.chr3 C 0 T 192 s panPan2.chrUn_NW_014024201v1 110342 50 + 190779 TGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTG i panPan2.chrUn_NW_014024201v1 T 144 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=2137.000000 s hg38.chr3_KI270779v1_alt 165875 9 + 205312 ACAGGAAGT s panTro5.chr3 200153412 9 + 202621043 ACAGGAAGA i panTro5.chr3 T 192 C 0 s panPan2.chrUn_NW_014024201v1 110392 9 + 190779 ACAGGAAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914630 0 + 123690457 C a score=4969.000000 s hg38.chr3_KI270779v1_alt 165884 13 + 205312 GGGGTGGCGTGAG s panTro5.chr3 200153421 13 + 202621043 GGGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110401 13 + 190779 GGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914630 13 + 123690457 GAGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=24613.000000 s hg38.chr3_KI270779v1_alt 165897 24 + 205312 CTGTGGATACTGAGGAAGTGTCGG s panTro5.chr3 200153434 24 + 202621043 CTGTGGATGCTGAGGAAGCGTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110414 24 + 190779 CTGTGGATACTGAGGAAGGGCTGG i panPan2.chrUn_NW_014024201v1 C 0 T 96 s nomLeu3.chr11 120914643 24 + 123690457 CTGTGGATGCTGAGGACGTGTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 24 + 192460366 CTGTGGATGCTGAGAAAGCACCCG i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 24 + 17725628 CTGTGGATGCCGAGGAGGTGCTGG i saiBol1.JH378146 T 55 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=17477.000000 s hg38.chr3_KI270779v1_alt 165921 17 + 205312 TGACAGGAAGAGAGGTG s panTro5.chr3 200153458 17 + 202621043 TGACAGGAAGAGGGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110342 17 + 190779 TGACAGGAAGAGGGGTG i panPan2.chrUn_NW_014024201v1 T 96 C 0 s nomLeu3.chr11 120914667 17 + 123690457 TGGCAGGAAGAGAACTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98664 17 + 192460366 TGACAGGAAGAGTGGTA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479135 17 + 17725628 TCACAGGAAGCGGGGTG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e canFam3.chr33 29085295 792 + 31377067 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=8561.000000 s hg38.chr3_KI270779v1_alt 165938 7 + 205312 GCGTGAC s panTro5.chr3 200153475 7 + 202621043 GTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110359 7 + 190779 GTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914684 7 + 123690457 GTGTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98681 7 + 192460366 GCGTGAC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479152 7 + 17725628 GCGTGGC i saiBol1.JH378146 C 0 T 48 s canFam3.chr33 29086087 7 + 31377067 GTGTGTC i canFam3.chr33 I 792 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=59440.000000 s hg38.chr3_KI270779v1_alt 165945 55 + 205312 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGA-- s panTro5.chr3 200153482 55 + 202621043 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110366 55 + 190779 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914691 55 + 123690457 CTGTGGATGCTGAGGACGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGA-- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA-- i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA-- i saiBol1.JH378146 T 48 T 48 s canFam3.chr33 29086094 55 + 31377067 CTGTGGTGCTTGCTGGGGTGTCTATTGTAATCGGTGTCGT--CGGGACCTGTGATGT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=1680.000000 s hg38.chr3_KI270779v1_alt 166000 2 + 205312 TA s panTro5.chr3 200153537 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110421 2 + 190779 TA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914746 2 + 123690457 TG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479118 2 + 17725628 TG i saiBol1.JH378146 T 48 C 0 s canFam3.chr33 29086149 2 + 31377067 CG i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=53987.000000 s hg38.chr3_KI270779v1_alt 166002 46 + 205312 CTGAGGAAGTGTCGGT--GACAGGAAGA-GAGGTGGCGTGACCTGTGGA s panTro5.chr3 200153539 46 + 202621043 CTGAGGAAGGGCTGGT--GACAGGAAGA-GGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110423 46 + 190779 CTGAGGAAGGGCTGGT--GACAGGAAGA-GGGGTGGCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914748 46 + 123690457 CTGAGGAAGTGCTGGT--GACAGGAGGA-GAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98649 46 + 192460366 CTGAGAAAGCACCCGT--GACAGGAAGA-GTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479120 46 + 17725628 CCGAGGAGGTGCTGGT--CACAGGAAGC-GGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 C 0 T 55 s canFam3.chr33 29086151 49 + 31377067 TTGCTGATGTGTTGCTTCCACTGGAAGATGATGAGGTGTCACCAGGGGA i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=-1390.000000 s hg38.chr3_KI270779v1_alt 166048 1 + 205312 -T s panTro5.chr3 200153585 1 + 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110469 1 + 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914794 1 + 123690457 -T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 -T i macFas5.chr2 C 0 T 56 s canFam3.chr33 29086200 1 + 31377067 G- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=16992.000000 s hg38.chr3_KI270779v1_alt 166049 37 + 205312 GCTGAGGAAGTG------TCAGTGACAGGAAGAGGGGTGGTGT s panTro5.chr3 200153586 37 + 202621043 GCTGAGGAAGGG------CTGGTGACAGGAAGAGGGGTGATGT i panTro5.chr3 C 0 T 336 s panPan2.chrUn_NW_014024201v1 110470 37 + 190779 ACTGAGGAAGCG------TCGGTGACAGGAAGAGGGTTGGCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914795 37 + 123690457 GCTGAGGATGTG------TCAGTGACAGGAGGAGAGGTGGTGT i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29086201 43 + 31377067 GCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGTGGC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=-230.000000 s hg38.chr3_KI270779v1_alt 166086 3 + 205312 -CAC s panTro5.chr3 200153287 3 + 202621043 -GAC i panTro5.chr3 T 336 C 0 s panPan2.chrUn_NW_014024201v1 110507 3 + 190779 -GAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914832 3 + 123690457 -GAC i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29086244 3 + 31377067 TGA- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I a score=63707.000000 s hg38.chr3_KI270779v1_alt 166089 55 + 205312 CTGTGGATGCTGAGGAAAGGCT---GGTGACAGGAAGAGGGGTGACGTGACCTGTGGA s panTro5.chr3 200153290 55 + 202621043 CTGTGGATGCTGAGGAAGGGCT---GGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110510 55 + 190779 CTGTGGATACTGAGGAAATGTC---GGTGACAGGAAGAGAGGTGTCGTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914835 55 + 123690457 CTGTGGATGCTGAGGAAGTGCT---GGTGACAGGAAGAGAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACC---CGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 55 + 17725628 CTGTGGATGCCGAGGAGGTGCT---GGTCACAGGAAGCGGGGTGGCGTGGCCTGTGAA i saiBol1.JH378146 T 55 T 55 s canFam3.chr33 29086247 58 + 31377067 TAGTAGAAGACGATGAAGTGCTTGGTGTGCCAGACATGGCTGTGTCCTGGGTTGTACC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=-1390.000000 s hg38.chr3_KI270779v1_alt 166144 1 + 205312 -T s panTro5.chr3 200153345 1 + 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110565 1 + 190779 -T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120914890 1 + 123690457 -T i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 -T i macFas5.chr2 C 0 T 56 s canFam3.chr33 29086305 1 + 31377067 A- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=7337.000000 s hg38.chr3_KI270779v1_alt 166145 40 + 205312 GCTGAGGAAGTGTC-----------AGTGACAGGAAGAGGGGTGCTGTCAC s panTro5.chr3 200153346 40 + 202621043 ACTGAGGAAGGTCT-----------GGTGACAGGAAGAGCGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110566 40 + 190779 GCTGAGGAAGCGTC-----------AGTGACAGGAAGAGGGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s canFam3.chr33 29086306 50 + 31377067 TCTGTAGGAGTGTCTCCTCTTCGGGAGGATGAGGGAGAG-GATGTGATCAT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 56 + 192460366 T e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=23214.000000 s hg38.chr3_KI270779v1_alt 166185 29 + 205312 CTGTGGATGCTGAGGAAAGGCTGGTGACA s panTro5.chr3 200153386 29 + 202621043 CTGTGGATGCTGAGGAAGCGTCGGTGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110606 29 + 190779 CTGTGGATGCTGAGGAAGGGCTAGTGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 29 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACA i macFas5.chr2 T 56 C 0 s saiBol1.JH378146 479111 29 + 17725628 CTGTGGATGCCGAGGAGGTGCTGGTCACA i saiBol1.JH378146 T 55 C 0 s canFam3.chr33 29086356 22 + 31377067 -------CGCTGAGACACTGCTGGTTGCA i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3916896 21 + 6579706 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=9178.000000 s hg38.chr3_KI270779v1_alt 166214 19 + 205312 GGAAGAG------------------GGGTGACATGAC s panTro5.chr3 200153415 19 + 202621043 GGAAGAG------------------GGGTGGCATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110635 19 + 190779 GGAAGAG------------------AGGTGGTGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98669 19 + 192460366 GGAAGAG------------------TGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s saiBol1.JH378146 479140 19 + 17725628 GGAAGCG------------------GGGTGGCGTGGC i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29086378 37 + 31377067 GACTCTGTGCTGATCTCCATGGCCTGGGTGGAGTGAC i canFam3.chr33 C 0 I 12 s dasNov3.JH569502 3916917 12 + 6579706 -------------------------GGAAGCCGGGAC i dasNov3.JH569502 I 21 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=4215.000000 s hg38.chr3_KI270779v1_alt 166233 7 + 205312 CTGTGGA-- s panTro5.chr3 200153434 7 + 202621043 CTGTGGA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110654 7 + 190779 CTGGGGA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA-- i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479159 7 + 17725628 CTGTGAA-- i saiBol1.JH378146 C 0 T 55 s canFam3.chr33 29086427 7 + 31377067 CTGTTGT-- i canFam3.chr33 I 12 I 1 s dasNov3.JH569502 3916929 9 + 6579706 CTGGGTGGT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=12234.000000 s hg38.chr3_KI270779v1_alt 166240 41 + 205312 ------TTCTGAGGAAGTGTCGG---TGACAGGAAGAG------GGGTGGTGTGAC-- s panTro5.chr3 200153441 41 + 202621043 ------TGCTGAGGAAGCGTCGG---TGACAGGAAGAG------GGGTGGTGTCAC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110661 41 + 190779 ------TACTGAGGAAGTGTCCG---TGACAGGAAGAG------GGGTGGCCTGAC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98647 41 + 192460366 ------TGCTGAGAAAGCACCCG---TGACAGGAAGAG------TGGTAGCGTGAC-- i macFas5.chr2 C 0 T 48 s canFam3.chr33 29086435 42 + 31377067 ------TCTGGAGTAGAAGTCAG--------GGAAGAGTGTGCTGGTGAGTGTCCC-- i canFam3.chr33 I 1 I 16 s dasNov3.JH569502 3916938 52 + 6579706 TCCCGTCAAGGAGACGGAGCCAGATCCGACCGGAGGAA------CGGCCGTGGCCGTC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 55 + 17725628 T e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=27684.000000 s hg38.chr3_KI270779v1_alt 166281 48 + 205312 ---CTGTGGATACTG-AGGAAGGGCTGGTGACA------------GGAAGAGGGGTGGCGTGAC s panTro5.chr3 200153482 48 + 202621043 ---CTGTGGATGCTG-AGGAAGGGCTGGTGACA------------GGAAGAGGGGTGGTGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110702 48 + 190779 ---CTGTGGATGGTG-AGGAAGCGTCGGTGACA------------GGAAGAGGGGTGGCGTGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 ---CTGTGGATGCTG-AGAAAGCACCCGTGACA------------GGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s saiBol1.JH378146 479111 48 + 17725628 ---CTGTGGATGCCG-AGGAGGTGCTGGTCACA------------GGAAGCGGGGTGGCGTGGC i saiBol1.JH378146 T 55 C 0 s canFam3.chr33 29086493 57 + 31377067 ---TTAGGCCTGTTG-AGCTGATGTGGGTAACACTTCCCATTTCCGGTAGTGACGT---GTGCC i canFam3.chr33 I 16 C 0 s dasNov3.JH569502 3916990 52 + 6579706 ACCTTGTCACTGATGTCGGAGGATCTGGGGCTT------------GGTGGGAGGACTTCCCCAC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=10069.000000 s hg38.chr3_KI270779v1_alt 166329 7 + 205312 CTGTGGA s panTro5.chr3 200153530 7 + 202621043 CTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110750 7 + 190779 CTGTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 T 48 C 0 s saiBol1.JH378146 479159 7 + 17725628 CTGTGAA i saiBol1.JH378146 C 0 T 48 s canFam3.chr33 29086550 7 + 31377067 TTGTGGT i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3917042 7 + 6579706 GTGTGGA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=8457.000000 s hg38.chr3_KI270779v1_alt 166336 10 + 205312 ---TTCTGAGGAA s panTro5.chr3 200153537 10 + 202621043 ---TGCTGAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110757 10 + 190779 ---TACTGAGGAA i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 98647 10 + 192460366 ---TGCTGAGAAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479118 10 + 17725628 ---TGCCGAGGAG i saiBol1.JH378146 T 48 C 0 s canFam3.chr33 29086560 7 + 31377067 ---TGCTGAG--- i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3917049 13 + 6579706 CCAAACTGAAGAA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=25513.000000 s hg38.chr3_KI270779v1_alt 166346 38 + 205312 GTGTCGGTGACAGGAAGAGGGGTGG-CGTGACCTGTGGA s panTro5.chr3 200153547 38 + 202621043 GGGCTGGTGACAGGAAGAGGGGTGG-CGTGACCTGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110671 38 + 190779 GTGTCCGTGACAGGAAGAGGGGTGG-CCTGACCTGTGGA i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 98657 38 + 192460366 GCACCCGTGACAGGAAGAGTGGTAG-CGTGACCTGTGAA i macFas5.chr2 C 0 C 0 s saiBol1.JH378146 479128 38 + 17725628 GTGCTGGTCACAGGAAGCGGGGTGG-CGTGGCCTGTGAA i saiBol1.JH378146 C 0 I 582 s canFam3.chr33 29086567 39 + 31377067 GTGTCTGTTGCAATTGGTGGTGTTGTCGGGACCTCTGAT i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3917062 28 + 6579706 ---------GGAGAACGAGAGGTCG-GGTCGCTCAGGG- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1198.000000 s hg38.chr3_KI270779v1_alt 166384 2 + 205312 TA s panTro5.chr3 200153585 2 + 202621043 TG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110709 2 + 190779 TG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 48 s canFam3.chr33 29086608 2 + 31377067 CG i canFam3.chr33 I 2 I 3 s dasNov3.JH569502 3917090 2 + 6579706 TG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=3240.000000 s hg38.chr3_KI270779v1_alt 166386 3 + 205312 CTG s panTro5.chr3 200153587 3 + 202621043 CTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110711 3 + 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98649 3 + 192460366 CTG i macFas5.chr2 T 48 C 0 s canFam3.chr33 29086613 3 + 31377067 CTG i canFam3.chr33 I 3 C 0 s dasNov3.JH569502 3917092 3 + 6579706 CTG i dasNov3.JH569502 C 0 T 3516 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1054.000000 s hg38.chr3_KI270779v1_alt 166389 2 + 205312 AG s panTro5.chr3 200153590 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110714 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98652 2 + 192460366 AG i macFas5.chr2 C 0 C 0 s canFam3.chr33 29086616 2 + 31377067 AT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e dasNov3.JH569502 3917095 3516 + 6579706 T e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=315.000000 s hg38.chr3_KI270779v1_alt 166391 4 + 205312 GAAG s panTro5.chr3 200153592 4 + 202621043 GAAG i panTro5.chr3 C 0 T 3121 s panPan2.chrUn_NW_014024201v1 110716 4 + 190779 GAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98654 4 + 192460366 AAAG i macFas5.chr2 C 0 C 0 s canFam3.chr33 29086618 1 + 31377067 G--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3913579 4 + 6579706 GAAC i dasNov3.JH569502 T 3516 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=2805.000000 s hg38.chr3_KI270779v1_alt 166395 25 + 205312 CATCGGTGACATGAAGA------GGGGTGGT s panTro5.chr3 200150475 25 + 202621043 CGTCGGTGACAGGAAGA------GGGGTGGC i panTro5.chr3 T 3121 C 0 s panPan2.chrUn_NW_014024201v1 110720 25 + 190779 CGTCGGTGACAGGAAGA------GGGGTGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 98658 25 + 192460366 CACCCGTGACAGGAAGA------GTGGTAGC i macFas5.chr2 C 0 C 0 s canFam3.chr33 29086619 28 + 31377067 TGTTGCTTACACTGGGAACCAATGAGGT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3913583 11 + 6579706 CGACCGCGGCT-------------------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=12339.000000 s hg38.chr3_KI270779v1_alt 166420 13 + 205312 GTGACCTGTGGAT s panTro5.chr3 200150500 13 + 202621043 GTGACCTGTGGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110745 13 + 190779 GTGACCTGTGGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3 13 - 189199 GTGACCTGTGGAT i gorGor5.CYUI01000254v1 N 0 C 0 s macFas5.chr2 98683 13 + 192460366 GTGACCTGTGAAT i macFas5.chr2 C 0 I 5347 s canFam3.chr33 29086647 13 + 31377067 GTCACCAGGGGAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3913594 12 + 6579706 GTC-CCTTCAGCT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1525.000000 s hg38.chr3_KI270779v1_alt 166433 10 + 205312 -----GCCGAGGAAG s panTro5.chr3 200150513 10 + 202621043 -----ACTGAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 110758 10 + 190779 -----ACTGAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 I 1082 s gorGor5.CYUI01000254v1 16 10 - 189199 -----ACTGAGGAAG i gorGor5.CYUI01000254v1 C 0 C 0 s canFam3.chr33 29086660 5 + 31377067 -----GCTGA----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3913606 10 + 6579706 GCCCCAGTGG----- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=2393.000000 s hg38.chr3_KI270779v1_alt 166443 8 + 205312 CGTAGGTG s panTro5.chr3 200150523 8 + 202621043 CGTCGGTG i panTro5.chr3 C 0 I 3073 s gorGor5.CYUI01000254v1 26 8 - 189199 CGTCAGTG i gorGor5.CYUI01000254v1 C 0 C 0 s dasNov3.JH569502 3913616 8 + 6579706 CCCAGGTG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29086665 0 + 31377067 C e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1475.000000 s hg38.chr3_KI270779v1_alt 166451 17 + 205312 ACAG-----------GAAGAGGGGTGGC s panTro5.chr3 200153604 17 + 202621043 ACAG-----------GAAGAGGGGTGAT i panTro5.chr3 I 3073 C 0 s gorGor5.CYUI01000254v1 34 17 - 189199 ACAG-----------GAAGAGGGGTGGT i gorGor5.CYUI01000254v1 C 0 C 0 s canFam3.chr33 29086665 4 + 31377067 ------------------------TGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3913624 28 + 6579706 ACTGTCGTTGCCGTCTGGGACCGGTGGC i dasNov3.JH569502 C 0 I 1 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macNem1.NW_012014355v1 570349 620 + 19675229 I e calJac3.chr17 957069 1048 - 74750902 I e saiBol1.JH378146 479166 582 + 17725628 I e colAng1.NW_012118932v1 475091 620 + 7796314 I e manLeu1.NW_012102020v1 612336 620 - 1977891 I e chlSab2.chr15 434286 620 - 91754291 I e cerAty1.NW_012004056v1 506568 620 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=101587.000000 s hg38.chr3_KI270779v1_alt 166468 37 + 205312 GTTGCTGATGAGGGCCGTGGTGAAGGT-TTTACCAGAC s panTro5.chr3 200153621 37 + 202621043 GTTGCTGATGAGGGCCGTGATGAAGGT-TTTCCCAGAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 51 37 - 189199 GTTGCTGATGAGGGCCGTGATGAAGGT-TTTACCAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 570969 37 + 19675229 GTTGCTGACAAGGGCCATGTTGAAGGT-TGTACCGGAC i macNem1.NW_012014355v1 I 620 C 0 s cerAty1.NW_012004056v1 507188 37 + 16847902 GTTGCTGACGAGGGCCATGTTGAAGGT-TGTACCAGAC i cerAty1.NW_012004056v1 I 620 C 0 s chlSab2.chr15 434906 37 - 91754291 GTTGCTGATGAGGGCCATGTTGAAGGT-TGTACCAGAC i chlSab2.chr15 I 620 C 0 s manLeu1.NW_012102020v1 612956 37 - 1977891 GTTGCTGACGAGGGCCATGTTGAAGGT-TGTACCAGAC i manLeu1.NW_012102020v1 I 620 C 0 s colAng1.NW_012118932v1 475711 37 + 7796314 GTTGCTGACGAGGGCCATGATGAAGGT-CGTACCGGAC i colAng1.NW_012118932v1 I 620 C 0 s saiBol1.JH378146 479748 37 + 17725628 GTCGCCCACGAGGGCCGTGCTGAGGGT-TCTGCGGGAC i saiBol1.JH378146 I 582 C 0 s canFam3.chr33 29086669 38 + 31377067 ATGGCCATTTCTGACACTGTGGAAGGTGTGTGGCTGAC i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3913653 37 + 6579706 GTCGCTGGCTGGGCTTGAGCTAAGTGT-TCCGATGGGG i dasNov3.JH569502 I 1 C 0 e otoGar3.GL873829 434619 19127 - 608964 M e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e calJac3.chr17 957069 1048 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=515903.000000 s hg38.chr3_KI270779v1_alt 166505 143 + 205312 CCTGAAGGTGACAGAGTGTGGGTCTGGGTTTGTG-GAGATGTAAGCCCACTGGAT---GTGATCGATGGAGGTGT-------------GGGTGGGACTGTTGAGAAGGTGTCGGTTGCCTGGGACGCCAGGCTGATAGTGTCAGACCCTCTGCTGGTTCT s panTro5.chr3 200153658 143 + 202621043 CCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTG-GAGATGTAAGCCCACTGGAT---ATGATCGAAGGAGGTGT-------------GGGTTTGACTGTTGAGAAGGTGTCGTTCGCCTGGGACGCCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 88 143 - 189199 CCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTG-GAGATGTAATCCCCCTGAAT---GTGATCGAAGGAGGTGT-------------GGGTGTGACTGTTGAGAAGGTGTCGGTCGCCTGGGACGCCAGGCCGATGGTGTCAGACCCTCTGCTGGTTGC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571006 143 + 19675229 CCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTG-GAAATGTGAGCCCACTGGAT---GTGATCGAAGGAGGTGT-------------GGGTGTGACTGTTGAGAAAGTGTCAGTCGCCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507225 143 + 16847902 CCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTG-GAAATGTGAGCCCACTGGAT---GTGATCGAAGGAGGTGT-------------GGGTGTGACTGTTGAGAAAGTGTCAGTCGCCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 434943 143 - 91754291 CCTGAAGGTGACAGAGCGTGGGTCTCGGTTTGTG-GAAATGTGAGCCCACTGGAT---GTGATCGAAGGAGGTGT-------------GGGTGTGACTGTTGAGAAAGTGTCGGTCACCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 612993 143 - 1977891 CCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTG-GAAATGTGAGCCCACTGGAT---GTGATCGAAGGAGGTGT-------------GGGTGTGACTGTTGAGAAAGTGTCAGTCGCCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 475748 143 + 7796314 CCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTG-GAGATGTGAGCCCACTGGAT---GTGATCGAAGGAGGTGT-------------GGGTGTGACTGTTGAGAAAGTGTCGGTCGCCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 479785 122 + 17725628 CATGAAGGGGACCCAGTGCGGGCCTCGGGCTGTG-GCGATGTCTGCCCACTGAAT---GCGAACCGTGGAGGCAC-------------GGCTGTGGGCGTGGAGGAGCCGGGGGTCGCCGGG---------------------GAACCGCGGCCGTCTCC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 454363 143 - 608964 CCTGAAGTTGACAGAGTGTGGGCCTCTGTTTGTG-GAGTTGTGTGCCCATTTGGT---GTGGATGAAGGATGTGG-------------GGATGTGACTGTTGGGAAGGTGTCAGTCACCCGGGACACCAAGCTCATGGTTTCAGATGCTCCGGTGGTTCC i otoGar3.GL873829 M 19127 C 0 s canFam3.chr33 29086708 146 + 31377067 CTGGAAGGGGACGAAGTG-----CTTGGTGTGTGAGACAAGGCCGTGTCCTGGGTCGAGTCATCTGTAGGAGTGTCTCCTCTTCGAGAGGATGAG---GGAGAGGATGTGATCATCG-CTGAGACA-----CTGCTGGTTGTAGACTCTGTGCTAGTCTC i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3913690 143 + 6579706 CTTGACGCTGACAGAGTGTGTGCCAGGGCTTGTG-GAGAGGTGTGCCCGCCTGGT---GTGGAAGGAGGAGGTGG-------------GGATGTGCCCGGGAAGGCACTGTCAGTCACCGGGGAGACTGAAGTGATGGTTTCGCGGCCACTGCTGGTTGC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 444006 1646 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e calJac3.chr17 957069 1048 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=414289.000000 s hg38.chr3_KI270779v1_alt 166648 101 + 205312 TGTCCTCTGAGTCTGGGCCATCCGGGAAATGGCG--GCTGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTCGGTCTCCCTGCA-GTGG s panTro5.chr3 200153801 101 + 202621043 TGTCCTCTGAGTCTGGGCCATCCGGGAAATGGCG--GCTGTCTCCTGAGGAGAGGCGCTGGGAGAAGTTGGGCTTGACTGTCCTTTCGGTCTCCCTGCA-GTGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 231 101 - 189199 TGTCCCCTGAGTCTGGGCCATCCGGGAAATGGCG--GCTGTCTCCTGAGGAGAGGCGCTGGGAGAAGTTGGGCTTGACTGTCCTGTCAGTCTCCCTGCA-GTGG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571149 101 + 19675229 TGTCTTCTCAGTCTGCGCCATCCAGGAAATGGCG--GCCGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTTGGTCTCCCTGCA-GTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507368 101 + 16847902 TGTCCTCTGAGTCTGCGCTATCCGGGAAATGGCG--GCCGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTCGGTCTCCCTGCA-GTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435086 101 - 91754291 TGTCCTCTGAGTCTGCGCCATCTGGGAAATGGCA--GCCGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGAGTGTCCTGTCGGTCTCCCTGCA-GTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613136 101 - 1977891 TGTCCTCTGAGTCTGCGCCATCCGGGAAATGGCG--GCCGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTCGGTCTCCCTGCA-GTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 475891 101 + 7796314 TGTCCTCTGAGTCTGCGCCATCCGGGAAATGGCA--GCTGTCTCCTGAGGAGAGGCGCTGGGAGAAGTTGGGCTTGACTGTCCAGTCGGTCTCCCTGCA-GTGG i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 479907 80 + 17725628 TGTCCCCCGAGTCTGCACCGCCCAGGAGAC-----------------------TGGGCTGGGAGAGGTGAGGCTGGCCTCTCCTGGGGGTCTCCCTGCG-GTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 445652 101 - 6778120 TGTCCCCTGAGTCCGCGCCACCTGGGAAACGGCG--GACGTCTCCCGAGGAGAGGGGCTGGGGGAGGTGGGGCCGGCCTGTCCTGGCGGTGCCCCTGCG-GTGG i cebCap1.NW_016107444v1 I 1646 I 420 s otoGar3.GL873829 454506 101 - 608964 TGTGGTCTGAGTGTGGGACATCTGTGCAGTGGCT--GATGTTTCCTGAGGAATGGTGCTGGGAGCAGTTGCGGTTGACTGTCCTGTTGATCTCCCTGTGTGTG- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29086854 101 + 31377067 CATGGTCTGGGT--GGAGTGACCCTGAGATGACGCTGTTGTCTCTGGAGTAGAAGTCAGGGAAGAGTGTGCTGTTGAGTGTCCCCCTGGTCCACTTGTC-ATTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3913833 101 + 6579706 TGGCCCTTGAGTCTGAGCCATGTGGGAAGTAGGT--GAGGGGTCCTGAGAAGAGGTGCTGAGAGACGTGGAGACTGACTGTGCTACTGGCCGCCCAGTT-GTTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e calJac3.chr17 957069 1048 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=107891.000000 s hg38.chr3_KI270779v1_alt 166749 41 + 205312 AGGCCTCAGAGAGGGTGGGATGAA-------------AGG------------------------TGCCGGGG--------ACGATC s panTro5.chr3 200153902 41 + 202621043 AGGCCTCAGAGAGGGTGGGATGAA-------------AGG------------------------TGCCGGGG--------ACGATC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 332 41 - 189199 AGGCCTCAGAAAGGGTGGGTTGAA-------------AGG------------------------TGCCGGGG--------ACGATC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571250 41 + 19675229 AGGCCTCAGAGAGGGTGACAGGAA-------------AGG------------------------TGCTGGGG--------ACAATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507469 41 + 16847902 AGGCCTCAGAGAGGGTGACAGGAA-------------AGG------------------------TGCTGGGG--------ACAATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435187 41 - 91754291 AGGCCTCAGAGAGGGTGACAGGAA-------------AGG------------------------TGCTGGGG--------ACAATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613237 41 - 1977891 AGGCCTCAGAGAGGGTGACAGGAA-------------AGG------------------------TGCTGGGG--------ACAATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 475992 41 + 7796314 AGGCCTCAGAGAGGGTGACAGGAA-------------AGG------------------------TGCTGGGG--------ACAATC i colAng1.NW_012118932v1 C 0 C 0 s saiBol1.JH378146 479987 35 + 17725628 GGACCGGAGAGAGGGTGGGAGAAA-------------A------------------------------GGGG--------ACCATG i saiBol1.JH378146 C 0 I 1177 s otoGar3.GL873829 454607 41 - 608964 GGACTCCAGAGACAGCGGGAGGAG-------------AGC------------------------AGCTGGCG--------GTAGTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29086955 86 + 31377067 AGTCTGTTGAGCTGACTGGTGTAACACTTCCCGTTTCAGGTGGTGACGTGTGTCCCGTGGTTCCTGCTGGGGTGTCTGATGCAATC i canFam3.chr33 C 0 I 15 s dasNov3.JH569502 3913934 41 + 6579706 CAGCCCCAGAGGCCGAGGGAGAGA-------------TGG------------------------TGCTAGGG--------GAGATC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 445753 420 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e calJac3.chr17 957069 1048 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=118874.000000 s hg38.chr3_KI270779v1_alt 166790 35 + 205312 GAAGACGCCATTCCTG------TGCTTAC------------TGGG---------------ATGGCACC s panTro5.chr3 200153943 35 + 202621043 ACAGACGCCATTCCTG------TGCTTAC------------TGGG---------------GTGGCACC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 373 35 - 189199 GCAGACGCCATTCCTG------TGCTTAC------------TGGG---------------GTGGCACC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571291 35 + 19675229 GCAGACACCATTCCTG------TGCTTAC------------TGGG---------------GTGGCATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507510 35 + 16847902 GCAGACACCATTCCTG------TGCTTAC------------TGGG---------------GTGGCATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435228 35 - 91754291 GCAGACACCATTCCTG------TGCTTAC------------TGGG---------------GTGGCATC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613278 35 - 1977891 GCAGACACCATTCCTG------TGCTTAC------------TGGG---------------GTGGCATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476033 35 + 7796314 GCAGACACCATTCCCA------TGCTTAC------------TGGG---------------GTGGCATC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958117 50 - 74750902 GGGGACCCCGTTCCCA------TGCTTGC------------CAGGATGGTGCTTGCCCGAGTGACGTC i calJac3.chr17 I 1048 C 0 s saiBol1.JH378146 481199 35 + 17725628 GGGGACCCCGTTCCCG------TGCTTTC------------TGGG---------------GTGACACC i saiBol1.JH378146 I 1177 C 0 s otoGar3.GL873829 454648 35 - 608964 ACAGACATCATTCCTG------GGGTTTC------------TGGG---------------CTGGAGGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29087056 53 + 31377067 TGTGATGTCATTGGTGATGTGTTGCTTCCACTGGAAGATCTTGAA---------------GTGTCCCC i canFam3.chr33 I 15 C 0 s dasNov3.JH569502 3913975 35 + 6579706 ACAGACGCGTGTCTCC------CAGTTGC------------GTGA---------------GTAGTGTC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 445753 420 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=5751.000000 s hg38.chr3_KI270779v1_alt 166825 2 + 205312 AT s panTro5.chr3 200153978 2 + 202621043 AT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 408 2 - 189199 AT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571326 2 + 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507545 2 + 16847902 AT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435263 2 - 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613313 2 - 1977891 AT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476068 2 + 7796314 AT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958167 2 - 74750902 CG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481234 2 + 17725628 AT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 599 2 - 3732694 AT i aotNan1.NW_018507959v1 N 0 C 0 s otoGar3.GL873829 454683 2 - 608964 AG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29087109 2 + 31377067 AG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3914010 2 + 6579706 AG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e cebCap1.NW_016107444v1 445753 420 - 6778120 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=389657.000000 s hg38.chr3_KI270779v1_alt 166827 64 + 205312 GACTGGCTGAGGCGGACAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT s panTro5.chr3 200153980 64 + 202621043 GACTGGCTGAGGCGGACAGCAATTCGGTTGTGGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 410 64 - 189199 GACTGGCTGAGGCTGACAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571328 64 + 19675229 GACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTTACTGTCCCTGGAGGGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507547 64 + 16847902 GACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435265 64 - 91754291 GACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613315 64 - 1977891 GACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476070 64 + 7796314 GACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958169 64 - 74750902 GACTGGCTGAGGGGGACGGCAATTCGCTTGTTGACTGGGGGATGTGAGTGTCCCTGGAGGGTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481236 64 + 17725628 GACTGGCTGAGGGGGACGGCAATCCACTTGTTGACTGGGGGGTGTGAGTGTCCCTGGACGGTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446173 64 - 6778120 GACTGGCTGAGGCGGACTGCAATTCGCTTGTTGACTGGGGGGTGTGAGTGTCCCTGGAGGGTCT i cebCap1.NW_016107444v1 I 420 C 0 s aotNan1.NW_018507959v1 601 64 - 3732694 GACTGCCTGAGGGGGACGGCAATTCGCTTGTTGATTGGGGGGTGTGAGTGTCCCTGGAGGGTCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454685 64 - 608964 GACCGATCGAAGTGGACAAAAACTCATTTGTTGCCTGGCTTGTGTGTTTGTCCTTGGAAGGAGT i otoGar3.GL873829 C 0 I 967 s canFam3.chr33 29087111 62 + 31377067 GGGAGGCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGTGGCTGACACTGGAAAGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3914012 64 + 6579706 GCGCGCTTGCTGCGGCCGACAACGCAGTGCTTGCCGGAGCTGTGTGGCCGTCACTGGAGAGAGC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1924651.000000 s hg38.chr3_KI270779v1_alt 166891 362 + 205312 TGATGAAAACCTTGTCGTCTCTCCTGAGGTGGATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCCACTCGCCCCGGATGA------GGAAGGGGTAGCTGTGCCCGCTGAGGTGGTTCGTGAC--CCTGAGGAGGCCGGTTCGCTGGTCTGTGTTT---GTCCAGAGGCCTCTGTGCTCTCAGCCTGGTGGGTATGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATTGTCCTTCTGGGCCCCCTGGTGTTGACACTACAGAGTTGGCCAGAGTAAGGGCACCTGTTTTGGAAAGTGACGTGCCTCCTGAGGGCCCCAGGGTGGCATCATGGCTGCTGGG-----TGCTGCCTGCAGTG s panTro5.chr3 200154044 362 + 202621043 TGATGAAAACCTTGTCGTCTCTCCTGAGGTGGATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCCGCTCGCCCTGGATGA------GGAAGGGGTAGCTGTGCCCACTGAGGTGGTTCCTGAC--CCTGAGGAGGCCGGTTCGCTGGTCTGTGTTT---GTCCAGAGGCCTCTGTGCCCTCAGCCTGGTGGGTTTGGGTCATGGCTGCCGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATTGTCCTTCTGGGCCCCCTGGTGTTGACACTACAGAGTTGGCCAGAGGAAGGGCACCTGTTTTGGAAAGTGACGTGCCTCCTGAGGGCCCCAGGGTGGCATCATGGCTGCTGAG-----TGCTGCCTGCAGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 474 362 - 189199 TGATGAAAACCTTGTCGTCTCTCCTGAGGTGGATATTC------CTTCACTT------CCTGAAGGTGT-TGTGCCGCTCGCCCTGGATGA------GGAAGGGGTAGCTGTGCCGGCTGAGGTGGTTCCTGAC--CCTGAGGAGGCCAGTTCGCTGGTCTGTGTTT---GTCCAGAGGCATCTGTGCCCTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATTGTCCTTCTGGGCCCCCTGGTGTTGACACTACAGAGTTGGCCAGAGGAAGGGCGCCTGTTTTGGAAAGTGACGTGCCTCCTGAGGGCCCCAGGGTGGCATCATGGCTGCTGGG-----TGCTGCCTGCAGTG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571392 353 + 19675229 TGGCGAGAACCATGTGGTCTCTCCTGTGATGGATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCTGCTCGCCCTGGATGA------GGAAGGGGTAGCTGTGCCCTCTGAGGTGGTGCCCGAC--CCTGAGGAGGCCGGTTCACTGGTCTGTGTTT---CTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTTTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGGGACCCCTGGTGTTGACACTACA-------CC--AGGAAGGGCACCTGTTATGGAAAGTGATGCGCCTCCTGAGGGCGCCAGGGTGGAGTCAGGGCTGCTAGG-----TGCCACCTGCAGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507611 353 + 16847902 TGGCGAGAACCATGTGGTCTCTCCTGTGATGGATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCTGCTCGCCCTGGATGA------GGAAGGGGTAGCTGTGCCATCTGAGGTGGTGCCCGAC--CCTGAGGAGGCCGGTTCACTGGTCTGTGTTT---CTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGGGACCCCTGGTGTTGACACTACA-------CC--AGGAAGGGCACCTGTTATGGAAAGTGATGCGCCTCCTGAGGGCGCCAGGGTGGAGTCAGGGCTGCTGGG-----TGCCGCCTGCAGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435329 353 - 91754291 TGGTGAGAACCATGTGGTCACTCCTGTGATGGATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCCGCTCGCCCTGGATGA------GGAAAGGGTAGCTGTGCCCTCTGAGGTGGTGCCCGAC--CCCGAGGAGGCCGGTTCACTGGTCTGTGTTT---CTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTAGGACCCCTGGTGTTGACACTACA-------CC--AGGAAGAGCGCCTGTTATGGAAAGTGATGCACCTCCTGAGGGCGCCAGGGTGGAGTCAGGACTGCTAGG-----TGCCGCCTGCAGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613379 353 - 1977891 TGGCGAGAACCATGTGGTCTCTCCTGTGATGGATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCTGCTCGCCCTGGATGA------GGAAGGGGTAGCTGTGCCATCTGAGGTGGTGCCCGAC--CCTGAGGAGGCCGGTTCACTGGTCTGTGTTT---CTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGGGACCCCTGGTGTTGACACTACA-------CC--AGGAAGGGCACCTGTTATGGAAAGTGATGCGCCTCCTGAGGGCGCCAGGGTGGAGTCAGGGCTGCTGGG-----TGCCGCCTGCAGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476134 353 + 7796314 TGGCGAGAACCATGTGGTCTCTCCTGAGGTGAATATTC------CTTCGCTT------CCTGAAGGTGT-TGTGCCACTCGCCCTGGATGA------GGAAGGGGTAGCTGTGCCCTCTGAGGTGGTGCCCGAC--CCTGAGGAAGCCGGTTCGCTGGTCTGTGTTT---CTCCAGAGGCCTCTGTGTCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCGGG---TGAGGTGCTGGCAGAAGCTGATGTCCATCGTCCCTCTGGGCCCCCTGGTGTTGACACTACA-------CC--AGGAAGGGCGCCTGTTATGGAAAGTGATGCGCCTCCTGAGGGCCGCAGGGTGGAGTCAGGGCTGCTGGG-----TGCCGCCTGCAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958233 362 - 74750902 TGGTGAGAACCGCGTGGTCTCCCCTGAGGTGGACATTC------CGTGGCTT------CCTGAAGGTGT-TGTGCCACTTGTCCTGGATGA------GGAAGGGGTAGCTGTGCCAGCTGGGATGGGGCCTGAC--CCTGAGGAGGCCGGTTGGCTGGTCTGTGTTT---CTCCGGAGGCCTCTGTGCCCCGAGCCTGGTGGGGTTGGGTCATAGCGGGTGCTGTGCTGGG---TGACGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGCATCCACTGGTGTTGACACCGCAGAGGTGGCCGGAGGAATGGTGCCTGTGATGGAAAGCGATGTGCCTCCTGAGGGCCCCAGGGTGGCGTCAGGGCTGCCGGG-----TGCTGCCTGCGGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481300 362 + 17725628 TGGTGAGAACCACGTGGTCTCGCCTGAGGTGGACATTC------CGTGGCTT------CCTGAAGGTGT-TGTGCCACTCGTCCTGGATGA------GGAAGGGGTGGCCGAGCCAGCCGCGATGGTGCCTGAC--CCTGAGGAGGCTGGTTGGCTGGTCTGTGTTC---CTCCAGAGGCCTCTGTGCCCCGAGCCTGGTGGGTTTGGGTCATAGCTGGCGCTGTGTTGGG---TGATGCGCTGGCAGAGGCTGCTGTCCACCGTCCCTCTGCGCCCACTGGTGTTGACACCACAGAGGTGGCCGGAGGAATGGCCCCTGTGATGGAAGGCGATGTCCTTCCTGAGGGCCCCAGGGTGGCGTCGGGGCTGCTGGG-----TGCCGCCTGCAGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446237 362 - 6778120 TGGTGAGAGTGGCGTGGTCTCGCCTGAGGTGGACATTC------CGTGGCTT------CCTGAAGGTGT-TGTGCCACTCGTCCTGGATGA------GGAAGGGGTAGCTGTGCCCGCTGCGATGGTGCCTGAC--CCTGAGGAGGCCGGTTGGCTGGTCTGTGTTT---CTCCAGAGGCCTCTGTGCCCCGAGCCTGGTGGGTTTGGGTGATAGCTGGTGCTGTGTTGGG---TGACGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGCGCCCACTGGTGTTGACACCACAGAGGTGGTCGGAGGAATGGCACCTGTGATGGAAAGCGATGTGCCTCCTGAGGGCCCCAGGGTGGCGCCAGGGCTGCTGGG-----TGCCGCCTGCAGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 665 362 - 3732694 TGGTGAGAACCACGTGGTCTTGCCTGAGGTGCACATTT------CTTGGCGT------CCTGAAGGTGC-TGTGCCACTCGTCCTGGAGGA------GGAAGGGGTAGCTGTGCCGGCTGCGATGGTGCCTGAC--CCTGAGGAGGCCGGCTGTCTTGTCTGTGTTT---CTCCAGAGGCCTCTGTGCCCCGAGCCTGGTCGGTTTGGGTCATAGCTGGTGCTGTGTTGGG---TGACGTGCTGGCAGAGGCCGATGTCCATCGTCCTTCTGCGCCCACTGCTGTTGACACCACAGAGGTGGCCGGAGGAATGGCGCCTGTGATGGAAAGCGATGTGCCTCCTGAGGGCCCCAGGGTGGCGTCAGGGCTTCTGGG-----TGCCGCCTGCAGTG i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29087173 328 + 31377067 -GATGAAGTGCTTGGTGTGTCA---GACAAGGCCATGT------CCTGGGTTGAGTCATCTGTAGGTGTGTGTTCACTTCG----GGAGGA------TGAGGGAGTGGATGTGATCATCGCTGAGACACT---------------GCTGGTTGCAGACTCTGTGCT-----------GGTCTCCATGGTCTGGGTCGTGTAACCCTGAG--ATGACT-CTGTTGTCTCTGGAGTAGAAGTCAGGGAAGAGTGTGCTGGTGAGTGTCCCCCTGGTCCACCTGTCATTGAGCCTGTTGAGCTGACTGGAGTAACACTTCCCGTTTCAGGTGGTGACGTGTGCCTTG-----------------TTGTGCCTGCTGGGGTGTCTGTTGCCATCAGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3914076 377 + 6579706 TGGCGCAGAGGCTGTGGTACCAGCGGAGGGGAATGGTTGCGGCGCAGCGCTT------CCTGCAGTGGT-TTGGCTGGTAGCGGTGGATGGCGATGTGGATGTGGCAGTGGTGCCCACCACGGTCGTGTCAGTCAGCCTCAGG--CCCGCTTTGTTGGTGTGAGGAGGAACCCCAGAGGTCCGTGTGCCTTGAGTTTGCTGAGCCTGCGAAATGGCTGGTGTGGTGTCAGG---TGAGGTGCCGGTGGAAGGCGATGTTGCTTGCCTGCCCGGGGACCCCGGTGGTGAGACTCCAGAGGTGACCGGGCCCAGGCTGCTCGCTTGGGAAAACGACGTGTCCCCTGAGGTTCCCAGGGTGCTGTCAGGGCGCGTTGG-----TGTTGCCCGCTGCT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 454749 967 - 608964 I e mm10.chr16 65449197 1915 - 98207768 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1203122.000000 s hg38.chr3_KI270779v1_alt 167253 198 + 205312 CTGTGGTCGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCGGTGGGAGCTGGGGCAAAGGTTGTTGCTGCACTTATGGTGGGTGCGTCCTGAGGAACAATTTCTGAGGGCGAGTGCCCACTGGCTGTGAAGGAAGAACCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCATGGGGGAGACG----------------GACCTCG-TGGTTTGTGATTCTTGTG s panTro5.chr3 200154406 198 + 202621043 CTGTAGTCGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCGGTGGGAGCTGGGGCAAAGGTTGTTGCTGCACTTATGGTGGGTGCGTCCTGAGGAACAATTTCTGAGGGCGAGTGCCCACTGGCTGTGAAGGAAGAACCTG------------GGGTGGTGACTGTCTTCA---TGTC----------AGTCATGGGGGAGACG----------------GACCTCG-TGGTTTGTGATTCTTGTG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 836 198 - 189199 CTGTGGTCGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCGGTGGGAGCTGGGGCAAAGGTTGTTGCTACACTTATGGTGGGTGCGTCCTGAGGAACAATTTCTGAGGGCGAGTGCCCACTGGCTGTGAAGGGAGAACCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCATGGGGGAGACG----------------GACCTCG-TGGTTTGTGCTTCTTGTG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571745 198 + 19675229 CTGTGGTTGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCAGTGGGAGCTGGGGCAAAGGTTGTCGCTGCACTTATGGTAGGTGCGTCCTGAGGAGCAATTTCTGAGGGTGAGTGCCCACTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 507964 198 + 16847902 CTGTGGTTGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCAGTGGGAGGTGGGGCAAAGGTTGTCGCTGCACTTATGGTAGGTGCATCCTGAGGAGCAATTTCTGAGGGTGAGTGCCCACTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435682 198 - 91754291 CTGTGGTTGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCAGTGGGAGCTGGGGCAAAGGTTGTCGCTGCACTTATGGTAGGTGCGTCCTGAGGAGCAATTTCTGAGGATGAGTGCCCACTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613732 198 - 1977891 CTGTGGTTGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCAGTGGGAGGTGGGGCAAAGGTTGTCGCTGCACTTATGGTAGGTGCGTCCTGAGGAGCAATTTCTGAGGGTGAGTGCCCACTGGCTATGAAGGAAGAGCCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476487 198 + 7796314 CTGTGGTTGGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCCAGTGGGAGCTGGGGCAAAGGTTGTCGCTGCAGTTATGGTAGGTGCGTCCTGAGGAGCAATTTCTGAGGGCGAGTGCCCATTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGACTGTCTTGG---TGTC----------AGTCACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958595 201 - 74750902 CTGTGGCTGGGGCCTG----------GGGCCTGTGAC-----------------------CGTCCCTGGAGGGGGCTGGGGTGAAGGTTGTTGCTGCACTGACGGCGGATGCGTCCTGAGGAACAGTTTCTGAGGGCGAGTGTCCGCTGGCTGTGAAGGAAGAAGCTG------------GGGTGGTGGCTGTCTTGAGGCTGTC----------AGTCACGGGGGAGACG----------------GACCTCG-TGGTTTGGGATTCTCGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481662 201 + 17725628 CTGTGGTTCGGGCCTG----------GGTTGTGTGAC-----------------------CGTCCCTGGTGGGCGCTGGGGTGAAGGTTGTTGCTGCACTTATGGTGGATGCGTCCTGAGGAGCCATTTCTGAGGGCGGGTGTTGGCTGGCTGTGAAGGAAGAAGCTG------------GGGTGGTGGCTGTCTGGAAGCCGTC----------AGTCACGGGGGAGATG----------------GACCTCG-TGGTTTGGGATTCCCGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446599 201 - 6778120 CTGTGGTTGGGGCCTG----------GGCTGTGTGCC-----------------------CAACCCTGGTGGGGGCTGGGGTGAAGGTTGTTGTGGCACTTACGGTGGATGCGTCCTGAGGAACAATTTCTGAGGGCGAGTGTCCGCTGGCTGTGAAGGAAGAAGCTG------------GGGTGGTGGCTGTCTTGAGGCTGTC----------AGTCACGGGGGAGATG----------------GACCTTG-TGGCTTGGGATTCTCGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1027 201 - 3732694 CTGTGGTTAGGGCCTG----------GGTTGTGTGAC-----------------------CATCCCTGGTGGGGGCTGGGGTGAAGGTTGTCGCTGCACCTACGGTGGATGCGTCCTGAGGAACAATTTCTGAGGGCGAGTGTCCGCTGGCTGTGAAGGAAGAAGCTG------------GGGTGGTGGCTGTCTTGAGGCTGTC----------AGTCACGGGGGAGATG----------------GACCTCG-TGCTTTGGGAGTCTCGTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455716 168 - 608964 ctgtggttgTGCCCTG----------GGTTGTGTGAC-----------------------CATCTCCCGAGGGAGCTGGGTGGAAGGTTGTGGC---------------------------------TTCTGAGAGTGAGTGTCCAGTGGGTGTCAGAGAAGAGCCTG------------TAGTTGTGACCGTGTTGGTGGTGTT----------GGTCATGGTTGACACT----------------GACCTCG-TGGTTTGGGATTCCTGTG i otoGar3.GL873829 I 967 C 0 s canFam3.chr33 29087501 263 + 31377067 ---TCGTCAGGACCTGTGATACTGTTGGTGATGTGCTGCTTTCACTGGAAGATGATGAGGTGTCCCCAGGGGAAGCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGT------GGCTGACACTGGAAGGGGACGAACTGCTTGGTGTGTCAGACAAGGCTGTGTCCATGTCCTGGGTCGTGCCATCTGTAGGAGTGTCTCCTCTTCGGGAGGATGAGGGAGAGGATGTGATCATCGCTGAGACACTGCTGGCTCCAGACTCT-GTG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3914453 201 + 6579706 GTGTGGTTGGCGCCCG----------GGTGGTGTGGC-----------------------TCTCCCCGGAGGGCGTTGGGCTGAAGCCTGTCCTTGAACCCGCGGTGGTTGTATCCACACGACCACTTTCTGAGGCCGAGTGTGCACTTGGGCTGGATGAAGGAGTGG------------TGGGCGTGTCGGACCGGACCATTTG----------TGTCCCGGGGAGGCCT----------------GATGCCG-TGGTCGGGGACTCGAGGG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=253967.000000 s hg38.chr3_KI270779v1_alt 167451 34 + 205312 TGGTCTGCGGGGCTTGAGTGTGACCCCTTTGGGA s panTro5.chr3 200154604 34 + 202621043 TCATCTGCAGGGCTTGAGTGTGACCTCTTTGGGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1034 34 - 189199 TGGTCTGCGGGGCTTGAGTGTGACCTCTTTGGGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571943 34 + 19675229 TGGTCTGTGGGGCTTGAGTGTGACCTCTCTGGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508162 34 + 16847902 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435880 34 - 91754291 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613930 34 - 1977891 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476685 34 + 7796314 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958796 34 - 74750902 TGGTCTTCGAGGCTGGAGTGTGACCTCTGTGGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481863 34 + 17725628 TGGTCTTCGAGGCTGGAGTGTGACCACTCTGGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446800 34 - 6778120 TGGTCTTCGAGGCTGGAGTGTGACCTCCCTGGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1228 34 - 3732694 TGGTCTTCGAGGCTGGAGTGCGACCTCTCTGGGA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455884 34 - 608964 TGGTCTGTGAGGCTTCAGTGTGATGTATCTGTGA i otoGar3.GL873829 C 0 T 1385 s mm10.chr16 65451112 34 - 98207768 TGGTCTCCATGTTTCCAGTGTGTTGTCTCTGAGG i mm10.chr16 I 1915 C 0 s canFam3.chr33 29087765 34 + 31377067 TGATCTCCATGGCCTGGGTGGAGTGACCCTGAGA i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3914654 34 + 6579706 TGGTCTGTGCGCCTTGAGTGTGCCCCCTCTCAGA i dasNov3.JH569502 C 0 C 0 e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=363428.000000 s hg38.chr3_KI270779v1_alt 167485 61 + 205312 AACAGCTGGTGATTCCTGAGGAGAGGTGCTTGTGGAATGTATTGTTGAATGATTTGTTGAT s panTro5.chr3 200154638 61 + 202621043 AACACCTGATGATTCCTGAGGAGAGGTGCTTGTGGAATGTATTGTTGAATGCTTTGTTGAT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1068 61 - 189199 AGCAGCTGGTGATTCCTGAGGAGAGGTGCTTGTGGAATGTATTGTTGAATGATTTGTTGAT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 571977 61 + 19675229 AACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTTGTTGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508196 61 + 16847902 AACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTTGTTGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435914 61 - 91754291 AACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTTGTTGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 613964 61 - 1977891 AACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTTGTTGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476719 61 + 7796314 AACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAACGTATTGTTGAATGATTTGTTGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958830 61 - 74750902 AACAGCCGACGGTCTCCGAGGAGAGGTGCTCACAGGGTGTGTTGTTGGAGGATATGTTGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481897 61 + 17725628 AACAGCCGATGATCTCTGAGGAGAGGTGCTTACGGGGTGTATTGTTGAACGATACGTCGAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446834 61 - 6778120 AACAGCCGATGATCTCTGAGGAGAGGTGTTTACGGGATGTATTGTTGAATGATATGTTGAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1262 61 - 3732694 AACAGCCGCTGATCCCTGAGGAGAGGTGCTTACGGGATGTATTGTTGAATGATATGTTGAT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454533 61 - 608964 AGTGGCTGATGTTTCCTGAGGAATGGTGCTGGGAGCAGTTGCGGTTGACTGTCCTGTTGAT i otoGar3.GL873829 T 1385 I 364 s mm10.chr16 65451146 61 - 98207768 AAGTGATGTTAATTCCTGTGAAGAAGTGCTGGGCATTGACACTGTTGACATATTCTGGGAT i mm10.chr16 C 0 I 3 s canFam3.chr33 29087800 57 + 31377067 GACT-CTGTTGTCTCCAGAGTAGAAGTCAGGGAAGAGTGTGCTGTTGAGTGTCCCCCT--- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3914688 57 + 6579706 AACAGCCGACGACTCCGCAGGAGAAGGGCTGGCAGAGGATGGTGTTGAGCGCCTTGT---- i dasNov3.JH569502 C 0 C 0 e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=193629.000000 s hg38.chr3_KI270779v1_alt 167546 37 + 205312 GGTGCCGTTGTAATTT--GTTGTGATGT-----GTGTCTATCCA s panTro5.chr3 200154699 37 + 202621043 GGTGCCATTGTAATTT--GTTGTGATGT-----GTGTCTATCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1129 37 - 189199 GGTGCCGTTGTAATTT--GTTGTGATGT-----GTGTCTATCCA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572038 37 + 19675229 GGTGCCATTGTAATTT--GTTGTGATGT-----GTGTCCATCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508257 37 + 16847902 GGTACCATTGTAATTT--GTTGTGATGT-----GTGTCCATCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 435975 37 - 91754291 GGTGCCATTGTAATTT--GTTGTGATGT-----GTGTCCATTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614025 37 - 1977891 GGTACCATTGTAATTT--GTTGTGATGT-----GTGTCCATCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476780 37 + 7796314 GGTGCCATTGTAATTT--GTTGTGATGT-----GTGTCCATCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958891 37 - 74750902 GGTGCCGTTGTACTTT--GTGGTGGTGT-----GTGTCCATCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481958 34 + 17725628 GGTGCCATCGTAATTT-----GTTGTGT-----GTGTCCATCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446895 37 - 6778120 GGTGCCATTGTAATTT--TTTGTGGTGT-----GTGTCCATCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1323 37 - 3732694 GGTGCCGTTGTAATTT--GTTGTGGTGT-----GTGTCCATCCA i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65451210 39 - 98207768 GGTGTCAATGAGACCTGGGTGGTGGCAA-----GTGTAGAACCA i mm10.chr16 I 3 I 619 s canFam3.chr33 29087857 26 + 31377067 GGTCCACTTGTCATTA--GGCCTGTTGA---------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3914745 39 + 6579706 GGCGCCCGCG---CTT--GTTGAGGCATCCGGGGTGCCGGTGCC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 454594 364 - 608964 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=923035.000000 s hg38.chr3_KI270779v1_alt 167583 174 + 205312 ----GCATAGGTGAAGAAGATGGGGATGTGGCCGTTTTTATCATCTG-AGTCACACTGTAGCTTGGGCTGCTGAGAAGAGCCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCGCCTGCCCC---------TGTTGTTTTTGGGAGAGTTGTGCTGTG----GGAGGAGTA---T----GTGGTGGGCT s panTro5.chr3 200154736 174 + 202621043 ----GCATAGGGGAAGAAGATGGGGATGTGGCCGTTTTTATCATCTG-AGTCACACTGTAGCTTGGGCTGCTGACAAGAGCCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTTTGGGAGAGTTATGCTGTG----GGAGGGGTA---T----GTGGTGGGCT i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1166 174 - 189199 ----GCATAGGTGAAGAAGATGGGGATGTGGCCGTTTTTATCATCTG-AGTCACACTGTAGCTTGGGCTGCTGACAAGAGCCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTTTGGGAGAGTTGTGCTGTG----GGAGGAGTA---T----GTGGTGGGCT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572075 174 + 19675229 ----GCATAGGTGAAGAAGATGGGGATGTGGCCGTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGGTG---T----GTGGTGGGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508294 174 + 16847902 ----GCATAGGTGAAGAAGATGGGGATGTGGCCGTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGGTG---T----GTGGTGGGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436012 168 - 91754291 ----GCATAGGTGAAGAAGATGGGGTT------GTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGGTG---T----GTGGTGGGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614062 174 - 1977891 ----GCATAGGTGAAGAAGATGGGGATGTGGCCGTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGATG---T----GTGGTGGGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476817 174 + 7796314 ----GCATAGGTGAAGAAGATGGGGATGTGGCCGTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAAGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCATCTGCTCC---------TGTTGTTTCCAGGAGAGTTGTGCTGCG----GGAGGGGTG---T----GTGGTGGGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 958928 174 - 74750902 ----GCATCGGTGAGGAAGGGGGCGATGTGGCTGCTTTTGTCATCTG-GGTCACACTGTATCTTGGGCTGTGGACAAGAACCTCTCCAGTGGTCCCCATTTCTTGTGTCCATTGTGTCTGGGCACTTGCCCC---------TGTTGTTTCTGGGAGAGCTGTGCTATG----GGAGGGGCG---T----GTGGTGGGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 481992 174 + 17725628 ----GCATAGGTGAGGAAGATGGGGATGTGGCTGCCTCTGTCATCTG-GGTCACACCGTATCTTGGGCTGTGGACACGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTCGTTTCTGGGAGAGTTGTGCTATG----GGAGGGGCG---T----GTGGCGGGCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 446932 174 - 6778120 ----GCATAGGTGAGGAAGATGGGGATGTGGCTGCTTTTGTCATCTG-GGTCACACTGTATTTTGGGCTGTGGACAAGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCC---------TGTTGTTTCTGGGAGAGTTGTGCTATG----GGAGGGGCG---T----GTGCTGGGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1360 174 - 3732694 ----GCATAGGTGAGGAAGATGGGGCTGTGGCTGCTTTTGTCATCTG-GGTCACACTGTATCTTGGGCTGTGGACAAGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCTTTGTGTCTGGGCACCTGCCCC---------TGTTGTGTCTGGGAGAGTTGTGCTATG----GGAGGGGCG---T----GTGGTGGGCT i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29087883 157 + 31377067 ---------------GCTGATGTGG--GTAACACTTCCCATTACCGGTAGTGACG-TGTGCCTTGTG------------GTTCCTGCTGAGGTGTCTGTTGCAATTGGTGGTGTTGTCGGGACCTCTGATGT---------CGTTGCTGATGTGTTGCTTACACTGGGAACCAAAGAGGTG---TCACCAGGGGAGGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3914784 152 + 6579706 ACTGGTACCTGTAGGTGAGACG------------------TCCCCGG-GATTGC-------CTTGGGTGGTGACTGGG-------CTGGTGGGGCTAGCCCCCAATG----CTGTTGCTGGGC--CAGCCCCATGGGGTGGCGACGTAGCAGAGGTAGGCGTGGGAGG----GAAGGCGTGGCTT----GTGGTGGGTT i dasNov3.JH569502 C 0 I 200 e otoGar3.GL873829 454594 364 - 608964 I e mm10.chr16 65451249 619 - 98207768 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=911347.000000 s hg38.chr3_KI270779v1_alt 167757 195 + 205312 CTCCTGGTTCCCCTATTGCTGAGACCTTAGAGGGGACCCTTGGAATAGTGCCAGCTGCCCCTG---TAGATGGATTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGATGTTGAGGGCAGTTCTGTTTGTGACCAAGTTGTGTGGCCTTTGCTGGAGAATGAGGAAGGCCATGTTGTTGTTTCATGTAGAGTAAATA s panTro5.chr3 200154910 195 + 202621043 CTCCTGGTTCCCCTATTGCTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTG---TAGATGGATTTCTTGTGACAAGCCTAGTG-GCAGCACCTGTTGATGTTGAGGGCAGTTCTGTTTGTGACCAAGTTGTGTGGCCTTTGCTGGAGAATGAGGAAGGCCATGTTGTTGTTTCATGTGGAGTAAATA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1340 195 - 189199 CTCCTGGTTCCCCTATTGCTGAGACCTCAGAGGGGACCCTTGGAAGAGTGCCAGCTGTCCCTG---TAGATGGATTTCCTGCGACAAGCCTAGTG-GCAGCACCTGTTGATGTTGAGGGCAGTTCTGTTTGTGACCAAGTTGTGTGGCCTTTGCTGGAGAATGAGGAAGCCCATGTTGTTGTTTCATGTGGAGTAAATA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572249 198 + 19675229 GTCCTGATTCCCCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGGAAGGCCATGTTATGGTTTCATGTGGAGGAAATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508468 198 + 16847902 GTCCTGATTCCCCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGAAAGGCCATGTTATGGTTTCATGTGGAGGAAATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436180 198 - 91754291 GTCTTGAATCCCCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGGAAGGCCATGTTATGGTTTCATGTGGAGGAAATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614236 198 - 1977891 GTCCTGATTCCCCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGAAAGGCCATGTTATGGTTTCATGTGGAGGAAATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 476991 195 + 7796314 GTCCTGATTCCCCTATTGTTGAGACCTCAGAGAGGACCCTTGGAATAGTGCCAGCTGTCCCTG---TAAATGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGACCAAGTTGTGCGGTCTTCACTGGAGAATGAGGAAGGCCATGTTGTGGTTTCATGCGGAGTAAATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959102 183 - 74750902 GCCCTGGTTCCCCTATTGTTGAGACCTCAGAAGGGACTCCTGGAATAGTGCCAGTTGTCCACG---TAGATGGACTTCCTGTGACCAGCATAGTG-GCAACACTTGTTGGTGTTGAGGGCAGCTCTTTTGGTAACCAAGTTGTGAGGCCTTCGCTG---------GAAGTCAGTGTT---GTTTCATGTGGAGTAAACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482166 192 + 17725628 GTCCTGGTTCCCCTGTTGTTGAGACCTCAGAAGGGACTCTTGGAATAGTGCCAGCTGTCCACG---TAGCTGGACTTCCTGTGACAAGCACAGTG-GCAGCACTTGGTGGTGTTGAGGGCAGCTCTTTTGGTAACCAAGTCGTGCTGCCTTCACTGGAGAGTGAAGAAGTCCATGTT---GCTTCACGTGGAGTAAACG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447106 192 - 6778120 GTCCTGGTTCCCCGATTGTTGAGACCTCAGAAGGGACTCCTGGAATACTGCCAGCTGTCCACG---TAGCGGGACTTGCTGTGACAAGCATAATG-GCAGCACTTGTTGGTGTTGAAGGCAGCTCTTTTGGTAACCAAGTTGTGTGGCCTTCACTGGAGAATGAAGAAGTCAATGTT---GTTTCATGCGGAGTAAACG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1534 189 - 3732694 GTCCTGCTTCCTCTATTGTTGAGAGCTCAGAAGGGACTCCTGGATTAGTGCCAGCTGTCCACG---TAGATGGACTTCCTGTGACAAGCATAGTG-GCAGCGCTTGTTGGTGTTGAGGGCAGCTCTTTTGGTAACCGAGTTGTGTGGCCTTCACTGGAGAAT---GAAGTCAATGTT---GTGTCATGTGGAGTAAACA i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29088040 155 + 31377067 G--ATGGTGTGGGTATTTCTGTCACTGCGGAAGGT------------GTG-TGGCTGACACTG---GAAAGGGA-------TGAAGTACCTGGTGTGTCAGACAAGGCCATGTCCTGGGTCGAGTCATCTGT-----AGGTGTGTGTTCACTTCGGGAGGATGAGGGAGAGGATGTGATCATCGC-------------- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 454594 364 - 608964 I e mm10.chr16 65451249 619 - 98207768 I e dasNov3.JH569502 3914936 200 + 6579706 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=41735.000000 s hg38.chr3_KI270779v1_alt 167952 8 + 205312 TTTCTTGA s panTro5.chr3 200155105 8 + 202621043 TTTCTTGA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1535 8 - 189199 TTTCTTGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572447 8 + 19675229 TCTCATGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508666 8 + 16847902 TCTCATGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436378 8 - 91754291 TCTCATGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614434 8 - 1977891 TCTCATGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477186 8 + 7796314 TCTCATGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959285 8 - 74750902 TCTCATGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482358 8 + 17725628 TCTCCTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447298 8 - 6778120 TCTCAGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1723 8 - 3732694 TCTCATGA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454958 8 - 608964 TTGCTTGA i otoGar3.GL873829 I 364 C 0 s canFam3.chr33 29088195 3 + 31377067 -----TGA i canFam3.chr33 C 0 C 0 e mm10.chr16 65451249 619 - 98207768 I e dasNov3.JH569502 3914936 200 + 6579706 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=178646.000000 s hg38.chr3_KI270779v1_alt 167960 39 + 205312 GACACACCTGG----AGAGAATG-------------AGCTCCTCTCATGAGGCCGT-------- s panTro5.chr3 200155113 39 + 202621043 GGCACACCTGG----AGAGAATG-------------AGCTCCTCTCATGAGGCCGT-------- i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 1543 39 - 189199 GACACACCTGG----AGAGAATG-------------AGCTCCTCTCATGAGGCCGT-------- i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572455 39 + 19675229 GACACACCTGG----AGACACTG-------------AACTCCTCTCATGAGGCCGT-------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508674 39 + 16847902 GACACACCTGG----AGAGACTG-------------AACTCCTCTCATGAGGCCAT-------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436386 39 - 91754291 GACACACCTGG----AGAGACTG-------------AACTCCTCTCATGAGGCCGT-------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614442 39 - 1977891 GACACACCTGG----AGAGACTG-------------AACTCCTCTCATGAGGCCAT-------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477194 39 + 7796314 GACACACCTGG----AGAGACTG-------------AACTCCTCTCATGAGGCCGT-------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959293 39 - 74750902 GACACACCTGG----AGAGACTG-------------AGCTCCTTTCATGAGGCCGT-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482366 39 + 17725628 GACGCGCTTGG----AGAGACTG-------------AGCTGCTCTCGTGAGGCCGT-------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447306 39 - 6778120 GATGCCCTTGG----AGAGAATG-------------AGTTCCTTTCATGGGGCCGT-------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1731 39 - 3732694 GACACACTTGG----AGAGACTG-------------AGCGCCTTTCATGAGGCCGT-------- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454966 22 - 608964 GACTCTCTGGT----GG----------------------TCTTCCAGT---------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29088198 33 + 31377067 GACACTGCTGGTTGCAGACTCTG-------------TGCTGGTCTC------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915136 60 + 6579706 GACACGCCCGG----CGAGGAAGCCGGGACCTGGGTGGTTCCCGTCAAGGAGACGGAGCCAGAT i dasNov3.JH569502 I 200 C 0 e mm10.chr16 65451249 619 - 98207768 I e panPan2.chrUn_NW_014024201v1 110768 1082 + 190779 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=12907.000000 s hg38.chr3_KI270779v1_alt 167999 4 + 205312 ----CCTG----------- s panTro5.chr3 200155152 4 + 202621043 ----CCTG----------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111850 4 + 190779 ----CCTG----------- i panPan2.chrUn_NW_014024201v1 I 1082 C 0 s gorGor5.CYUI01000254v1 1582 4 - 189199 ----CCTG----------- i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572494 4 + 19675229 ----CCTA----------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508713 4 + 16847902 ----CCTA----------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436425 4 - 91754291 ----CCTA----------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614481 4 - 1977891 ----CCTA----------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477233 4 + 7796314 ----CCTG----------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959332 4 - 74750902 ----CCTG----------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482405 4 + 17725628 ----CCTG----------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447345 4 - 6778120 ----CCTG----------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1770 4 - 3732694 ----CCTG----------- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454988 4 - 608964 ----CCTG----------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29088231 2 + 31377067 ----CA------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915196 19 + 6579706 CCGACCGGAGGAACGGCCG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65451249 619 - 98207768 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=912846.000000 s hg38.chr3_KI270779v1_alt 168003 151 + 205312 TGGTCTCTGCACCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAGAGAACTGGGG----------GAGAGTGCTGTTGACAGAGTGTCTGACCA------CCATATGGTTGAAACTTTGGAAGTGATTGCAGAAAT---GGTTCCACTT-----------ACAGATAG s panTro5.chr3 200155156 151 + 202621043 TGGTCTCTGCACCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAGAGAACTGGGG----------GAGAGTGCTGTTGACAGAGTGTCTGACCA------CCATATGGTTAAAACTTTGGAAGTGATTGCAGAAAT---GGTTCCACTT-----------ACAGATAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 111854 151 + 190779 TGGTCTCTGCACCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAGAGAACTGGGG----------GAGAGTGCTGTTGACAGAGTGTCTGACCA------CCATATGGTTGAAACTTTGGAAGTGATTGCAGAAAT---GGTTCCACTT-----------ACAGATAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1586 151 - 189199 TGGTCTCTGCACCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAGAGAACTGGGG----------GAGAGTGCTGTTGACAGAGTGTCTGACCG------CCATATGGTTGAAACTTTGGAAGTGATTGCAGAAAT---GGTTCCACTT-----------ACAGCTGG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572498 151 + 19675229 TGGTCTCTGCACCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAAAGAACTGGGG----------GAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAAT---GGTTCCCCTT-----------ACAGGTAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508717 151 + 16847902 TGGTCTCTGCTCCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAAAGAACTGGGG----------GAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAAT---GGTTCCCCTT-----------ACAGGTAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436429 151 - 91754291 TGGTCTCTGCACCTTC-----GCTCTGCTGGGTGTGGAAAGTTGTGGATATTTTTGGAGGTAAAGAACTGGGG----------GAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAAT---GGTTCCCCTT-----------ATAGGTAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614485 151 - 1977891 TGGTCTCTGCTTCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAAAGAACTGGGG----------GAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAAT---GGTTCCCCTT-----------ACAGGTAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477237 151 + 7796314 TGGTCTCTGCACCTTC-----ACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAAAGACCTGGGG----------GAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAAT---GGTTCCCCTT-----------ACAGGTAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959336 151 - 74750902 TGGTCTCTGCACCCTC-----ACTCGGGTGGGTGTGGAAAGCTGGGGGTAGTTTTGGAGGTAAAGAACTCGGG----------GAGAGTGCTGTTGACAGGGTGTCTGACCA------CCATCTGGTTGAAACTTGAGAAGTGATGGCAGAAGT---CGTTCCCCTT-----------ACAGATCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482409 151 + 17725628 TGGTCTCTGCACCTTC-----ACTCAGGTGGGTGTGGAGAGCTGTGGATAGTTCTGGAGGTAAAGACATGGGG----------GACAGTGCCGTTGACAGTGCGTCTGACCA------CCATACGGTCGAAACTTTAGAAGTGATGGCAGAGAT---GGATCCACTT-----------ACGGATAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447349 151 - 6778120 TGGTCTCTGCACCTTC-----ACTCGGGTGGGTGTGGAAAGCTGTGGATAGTTTTGGAGGTAAAGAACTGGGG----------GAGAGTGCTGTTGACAGTGTGTCTGACCA------CCATATGGTCGAAACTTTAGAAGTGATGGCAGAAAT---GGTTCCACTT-----------ACAGATAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1774 151 - 3732694 TGGTCTCTGCACCTTC-----ACTCCGGTGGGTGTGGAAAGCTGTGGAGAGTTCTGGAGGTAAAGAACTGGGG----------GAGAGTGCTGTTGACAGTGTGCCTGACCA------CCATGAGGTCGAAACTTTAGAAGTGATGGCAGAAAT---GGTTCCACTT-----------ACAGACAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454992 132 - 608964 -GGTCTGAGTTCTCTCAGAAAATGCTGCTGTCTCTTGA-----GTGGACGTTCTT-GAAGTAGTTCCCTTTGGTTTTTCTTGTGTAGGTGCTACTGA---GGTGGCTGA----------------GGTGACTCGTGTGAAAT-----------------TTCCATTT-----------CCAGGTGT i otoGar3.GL873829 C 0 T 375 s mm10.chr16 65451868 151 - 98207768 TGGTCCCCATGTTTTC-----AGTGTGTTGGCTCTGAGGAAGGGGTGACAATTTGTGAGTAGAAGTGATGGGT----------GTTGACACTGTTGACATATTCTGGGACGAAGGTGTCAATGTGGTCTG---TGTGGTGGCAGGTGTAGAACCTTGAGTCACTATT-----------GC------ i mm10.chr16 I 619 C 0 s canFam3.chr33 29088233 142 + 31377067 TGGTCTGGGTGGAGTG-----ACCC---------TGAGATGACGCTGTTGTCTCTGGAGTAGAAGTCAGGGAA----------GAGTGTGCTGTTGAGTGTCCCCCTGGTCC------ACTTGTCATTGAGTCTGTTGAGCTGACTGGTGTAAC---ACTTCCTGTT-----------TCAGGTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915215 123 + 6579706 TGGCCGTCACCTTGTC-----ACT------GATGTCGG------------------------AGGAGCTGGGG----------------CTTGCTGCGAGAACTTC---CCC------ACGTGTGGACCAAACTGAAGAAGGAGAACGAGAGGT---CGTGTCGCTCAGGGTGCTGGAACCGACCG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=917877.000000 s hg38.chr3_KI270779v1_alt 168154 128 + 205312 -TGATGTCTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGATTGGCATTCTGAACACCTTTGATGTTACCAGGAATGTATTGCTGACACTGGAAGG------------------------GGATGAGATGGTTGTTT---------------------------CACCAGAAGGGAATG s panTro5.chr3 200155307 128 + 202621043 -TGATGTCTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTTGGCATTCTGAACACCTTTGATGTTACCAGGAATGTATTGCTGACACTGGAAGG------------------------GGATGAGGTGGTTGTTT---------------------------CACCAGAAGGGAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112005 128 + 190779 -TGATGTCTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTTGGCATTCTGAACACCTTTGATGTTACCAGGAATGTATTGCTGACACTGGAAGG------------------------GGATGAGGTGGTTGTTT---------------------------CACCAGAAGGGAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1737 127 - 189199 -TGATGTCTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTTGGCATTCTGAACACCTTTGATGTT-CCAGGAATGTATTGCTGACACTGGAAGG------------------------GGATGAGGTGGTTGTTT---------------------------CACCAGAAGGGAATG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572649 128 + 19675229 -TGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGCGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508868 128 + 16847902 -TGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGTGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436580 128 - 91754291 -TGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGTGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614636 128 - 1977891 -TGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGTGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477388 128 + 7796314 -TGATATCTCCTCTGTGTTTCCAAGAGTGGAGTCTCTGGAGGTTGGCATTCTGAACACCTCTGATGTCACCAGGAATGCGTTGCTGACACTGGAGGG------------------------GGATGAGGTGGTTGTTT---------------------------TACCAGAAGGGAATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959487 128 - 74750902 -CGCTGTCTCCTCTGTGTTTCCAAGAGTAGAAGCTGCGGAGGTTGGCATTCGGGACACCTCTGATGTTACCAGGAATGCGCTGCTGACACTGGAAGG------------------------GGACGAAGTGGTTGTTT---------------------------CAGCATAAGGGAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482560 128 + 17725628 -TGATGTCTCCTCTGTGTTTCCAAGAGCGGACTCTGTGGAGGCTGGCGTTCCGGACACCTCCGACGCTGCCGGGAATGTGCTGCTGTCACTGGAAGG------------------------GGACGAGGTGGTTGTTC---------------------------CGCCAGAAGGGAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447500 128 - 6778120 -TGATGTCTCCTCTGTGTTTCCAAGAGTAGAATCTGTGGAGGCTGGCATTCTGAACACCTCTGAGGTTACTGGGAATGTGTTGCTGACACTGGAAGG------------------------GGATAAGGTGGTTGTTG---------------------------CACCAGAAGGGAGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 1925 128 - 3732694 -CGATGTCTCCTCTGTGTTTCCAAGAGTAGAATCTGTGGAGGGTGGCATTCTGAGCACCTCTGATGTTACCGGGAATGTGTTGCTGACACTGGAAGG------------------------GGATGAGGTGGTTGTTT---------------------------CACCAGAAGGGAGCA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454749 128 - 608964 -TGATGTGTGCTGTGTATTCTGCGTAGTGGAGTCTGTGTAGGTTTGTGTGCTAGGTATGTCAGATGTCATCAGTGGTGTGTGGGTGGCACCAGACGT------------------------AGGGGAGGTGGTTGTTT---------------------------CACCTGTATGGGACG i otoGar3.GL873829 T 375 C 0 s mm10.chr16 65452019 128 - 98207768 -TGTTGTGTGTCTTGTGTCTCCTGAGGTAATTTCAGTGGAGGATGCTGTGGATAACATGTGTGTTGAACTTGGAGCTGAACTGCTCAAGCTGGAAGC------------------------ATGTGAGGTGGTTGTCT---------------------------CACCAGGAGAGATTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29088375 179 + 31377067 -TGACGTGTGTCCCGTGGTTCCTGCTGGGGTGTCTGATGCAATCAGTGTCGTCGGGACCTGTGATGTCATTGGTGATGTGTTGCTTCCACTGGAAGATCTTGAAGTGTCCCCAGGGGAGGCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGTGGCTGACACTGGAAAGGGATG i canFam3.chr33 C 0 I 30 s dasNov3.JH569502 3915338 104 + 6579706 CGGCTGTCCCTTCAGCTGCCCCAGTGG------CCCCGGTGACTGTCGT---------------TGCCGTCTGGGACCGGTGGCCGTCGCTGGCTGG------------------------GCTTGAGCTAAGTGTTC---------------------------C----GATGGGGCTT i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=167609.000000 s hg38.chr3_KI270779v1_alt 168282 20 + 205312 TCTCCTGAGAAACTGTTCCA s panTro5.chr3 200155435 20 + 202621043 TCTCCTGAGAAACTGTTCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112133 20 + 190779 TCTCCTGAGAAACTGTTCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1864 20 - 189199 TCTCCTGAGAAACTGTTCCA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572777 20 + 19675229 TCTCCTGAGAAACTGTTCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 508996 20 + 16847902 TCTCCTGAGAAACTGTTCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436708 20 - 91754291 TCTCCTGAGAAACTGTTCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614764 20 - 1977891 TCTCCTGAGAAACTGTTCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477516 20 + 7796314 TCTCCTGAGAAACTATTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959615 20 - 74750902 TCTCCTGAGAAACTGTTCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482688 20 + 17725628 TCTCCTGAGAAACTGTTCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447628 20 - 6778120 TCTCCTGAGAAACTGTTCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2053 20 - 3732694 TCTCCTGAGAAACTGTTCCA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454877 20 - 608964 TTTCCTGAGAAACCGTTTTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452147 20 - 98207768 TTCTTTGGGAACTTGTCTCT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3915442 20 + 6579706 GACGCTGACAGAGTGTGTGT i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29088554 30 + 31377067 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=265345.000000 s hg38.chr3_KI270779v1_alt 168302 35 + 205312 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT s panTro5.chr3 200155455 35 + 202621043 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112153 35 + 190779 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1884 35 - 189199 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572797 35 + 19675229 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509016 35 + 16847902 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436728 35 - 91754291 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614784 35 - 1977891 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477536 35 + 7796314 CTTGG----------GTTGAATC-----------------CACTTGGTGAGGATAAAACAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959635 35 - 74750902 CTCAG----------AGTGAGTC-----------------CACTTGGTGAGGATAAAACAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482708 35 + 17725628 CTCAG----------ATTGAGTC-----------------CACTTGGCGAGGATAAAACAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447648 35 - 6778120 CTCAG----------ATTGAGTC-----------------CACTTGGTGAGGATAAAACAGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2073 35 - 3732694 CTCAG----------ATTGAATC-----------------CACTTGGTGAGGATAAAACAGT i aotNan1.NW_018507959v1 C 0 I 413 s otoGar3.GL873829 454897 35 - 608964 GTAGG----------ATGGTGTC-----------------CACTTTGGGTAGATGGAGGAGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452167 35 - 98207768 GTCTG----------AACTTGGT-----------------CACGTGAGGAAGCTGAAAGAGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29088584 52 + 31377067 CCTGG----------GTCGAGTCATCTGTAGGTGTGTGTTCACTTCGGGAGGATGAGGGAGT i canFam3.chr33 I 30 C 0 s dasNov3.JH569502 3915462 45 + 6579706 CCCGGCTTGTGGAGTGGTGTGTC-----------------CGCCTGGTATGGAAGGAGGAGG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=59562.000000 s hg38.chr3_KI270779v1_alt 168337 29 + 205312 TGATG-TTGTAACCGGTGTGAGGGTGT----------------TGA s panTro5.chr3 200155490 29 + 202621043 TGATG-TTGTAACTGGTGTGAGGGTGT----------------TGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112188 29 + 190779 TGATG-TTGTAACTGGTGTGAGGGTGT----------------TGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1919 30 - 189199 TGATGTTTGTAACCGGTGTGAGGGTGT----------------TGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572832 20 + 19675229 TGATG-TTGTAACCGGTG-------------------------TGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509051 20 + 16847902 TGATG-TTGTAACCGGTG-------------------------TGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436763 20 - 91754291 TGATG-TTGTAACCGGTG-------------------------TGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614819 20 - 1977891 TGATG-ATGTAACCGGTG-------------------------TGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477571 20 + 7796314 TGATG-TTGTAACTGGTG-------------------------TGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959670 17 - 74750902 ---TG-ATGCAACCAGTG-------------------------TGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482743 17 + 17725628 ---CG-ATGCAACCAGCG-------------------------TGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447683 17 - 6778120 ---TG-ATGCAACCAGTG-------------------------TGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 454932 20 - 608964 TGAAG-CGCTCGCCCACG-------------------------TGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452202 20 - 98207768 TGATG-TGGTCACCTCTG-------------------------GGA i mm10.chr16 C 0 I 2127 s canFam3.chr33 29088636 29 + 31377067 GGATG-TGATCATCGCTGAGACACTGC----------------TGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915507 44 + 6579706 TGGGG-ATGTGCCCGGGAAGGCGCTGTCAGTCACCAGGGAGACTG- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 2108 413 - 3732694 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=76320.000000 s hg38.chr3_KI270779v1_alt 168366 9 + 205312 GGGTGTTGA s panTro5.chr3 200155519 9 + 202621043 GGGTGTTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112217 9 + 190779 GGGTGTTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1949 9 - 189199 GGGTGTTGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572852 9 + 19675229 GGGTGTTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509071 9 + 16847902 GGGTGTTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436783 9 - 91754291 GGGTGTTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614839 9 - 1977891 GGGTGTTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477591 9 + 7796314 GGGTGTTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959687 9 - 74750902 GGGTGTTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482760 9 + 17725628 GGGTGTTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447700 9 - 6778120 GGGTGTTGA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 454952 9 - 608964 GGGTGCTTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65454349 9 - 98207768 GGGTGTTGA i mm10.chr16 I 2127 I 2281 s dasNov3.JH569502 3915551 9 + 6579706 AAGTGATGG i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29088665 0 + 31377067 C e aotNan1.NW_018507959v1 2108 413 - 3732694 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=56667.000000 s hg38.chr3_KI270779v1_alt 168375 9 + 205312 -TTTGAGATA s panTro5.chr3 200155528 9 + 202621043 -TTTGAGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112226 9 + 190779 -TTTGAGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1958 9 - 189199 -TTTGAGATA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572861 9 + 19675229 -TTTGAGATA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509080 9 + 16847902 -TTTGAGATA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 436792 9 - 91754291 -TTTGAGATA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 614848 9 - 1977891 -TTTGAGATA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 477600 9 + 7796314 -TTTGAGATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959696 9 - 74750902 -TCTGAGGTC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482769 9 + 17725628 -TTTGAGATA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447709 9 - 6778120 -TCTGAGGTA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 454961 9 - 608964 -CTTGAGACT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65456639 9 - 98207768 -TTTGAGGTT i mm10.chr16 I 2281 C 0 s canFam3.chr33 29088665 9 + 31377067 -TTGCAGACT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915560 9 + 6579706 TTTCGTGGT- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 2108 413 - 3732694 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=234812.000000 s hg38.chr3_KI270779v1_alt 168384 25 + 205312 CTCTGGTGGTCTCCACGCTCTGAGT s panTro5.chr3 200155537 25 + 202621043 CTCTGGTGGTCTCCATGCTCTGAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112235 25 + 190779 CTCTGGTGGTCTCCATGCTCTGAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1967 25 - 189199 CTCTGGTGGTCTCCATGCTCTGAGT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 572870 25 + 19675229 CTCTGGTGGTCTCTATGCTCTGAGT i macNem1.NW_012014355v1 C 0 I 378 s cerAty1.NW_012004056v1 509089 25 + 16847902 CTCTGGTGGTCTCTATGCTCTGAGT i cerAty1.NW_012004056v1 C 0 I 378 s chlSab2.chr15 436801 25 - 91754291 CTCTGGTGGTCTCTATGCTCTGAGT i chlSab2.chr15 C 0 I 4894 s manLeu1.NW_012102020v1 614857 25 - 1977891 CTCTGGTGGTCTCTATGCTCTGAGT i manLeu1.NW_012102020v1 C 0 I 378 s colAng1.NW_012118932v1 477609 25 + 7796314 CTCTGGTGGTCTCTATGCTCTGAGT i colAng1.NW_012118932v1 C 0 I 370 s calJac3.chr17 959705 25 - 74750902 CTCTGGTGGTCCCCACGCTCTGAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482778 25 + 17725628 CTCCGGTGGTCCCCATGCCGTGAGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447718 25 - 6778120 CTCTGGTGGTCCCCATGCTCTGAGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2521 25 - 3732694 CTCTGGTGGTCTCCATGCCCTGAGT i aotNan1.NW_018507959v1 I 413 C 0 s otoGar3.GL873829 454970 25 - 608964 CTCTGGTGGTCTTCCAGTCCTGGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65456648 25 - 98207768 GTCTGCTGGTGTCCATGCTTTCAGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29088674 25 + 31377067 CTGTGCTGGTCTCTATGGTCTGGGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915569 25 + 6579706 CACTGCTGGTTGCTGGCCCTTGAGT i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=335718.000000 s hg38.chr3_KI270779v1_alt 168409 46 + 205312 CTGGTGGTTCTTAGAAAAAGCTGTTGTGTCCTGAGTAGAAGTCCTT s panTro5.chr3 200155562 46 + 202621043 CTGGTGGTTCTTAGAAAAAGCTGTTGTGTCCTGAGTAGAAGCCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112260 46 + 190779 CTGGTGGTTCTTAGAAAAAGCTGTTGTGTCCTGAGTAGAAGCCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 1992 46 - 189199 CTGGTGGTTCTTAGAAAAAGCTGTTGTGTCCTGAGTAGAAGTCCTT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573273 46 + 19675229 CTGGTGGTTCTGAGAAAAACCTGTAGTGTCCTGAGTAGAAGTCCTT i macNem1.NW_012014355v1 I 378 C 0 s cerAty1.NW_012004056v1 509492 46 + 16847902 CTGGTGGTTCTGAGAAAAACCTGTTGTGTCCTGAGTAGAAGTCCTT i cerAty1.NW_012004056v1 I 378 C 0 s chlSab2.chr15 441720 46 - 91754291 CTGGTGGTTCTGAGAAAAACCTGTTGTGTCCTGAGTAGAAGTCCTT i chlSab2.chr15 I 4894 C 0 s manLeu1.NW_012102020v1 615260 46 - 1977891 CTGGTGGTTCTGAGAAAAACCTGTTGTGTCCTGAGTAGAAGTCCTT i manLeu1.NW_012102020v1 I 378 C 0 s colAng1.NW_012118932v1 478004 46 + 7796314 CTGGTGGTTCTGAGAAAAACCTGTTGTGTCCTGAGTAGAAGTCCTT i colAng1.NW_012118932v1 I 370 C 0 s calJac3.chr17 959730 43 - 74750902 CTGCTGGTTCTGAGGAAAAGCTGTTGTGTACTG---AGAAGTCCTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 482803 46 + 17725628 CTGCTGGTTCTGAGGAAAAGCTGCCGTGTGCTGAGTAGAAGTCCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447743 46 - 6778120 CCGCTGGTTCTGAGGAAAAGCTGTTGTGTCCTGGGTAGAAGTCCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2546 46 - 3732694 CTGGTGGTTCTGAGAAAAAGCTATTGTGTCCTGGGTAGACATCATT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454995 46 - 608964 CTGAGTTCTCTCAGAAAATGCTGCTGTCTCTTGAGTGGACGTTCTT i otoGar3.GL873829 C 0 T 292 s mm10.chr16 65456673 42 - 98207768 GTGTTGGTTCTGAGGAAGGGTTGACATTTTTTGACTTGAATT---- i mm10.chr16 C 0 I 1 s canFam3.chr33 29088699 46 + 31377067 CATGTGACCCTGAGATGACGATGTTGTCTCTGGAGTAGAAGTCAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3915594 46 + 6579706 CTGAGCCATGTGGGAAGTAGGTGAGGGGTCCTGAGAAGAGGTGCTG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=561830.000000 s hg38.chr3_KI270779v1_alt 168455 85 + 205312 GAGAAAGTTA---CTGGTGATTGTCCTTCTGGATCAACTGTTACTAAGGCTGCTGAGGTGACTGGCATAAGACTTCCAGTAACAGGTA s panTro5.chr3 200155608 85 + 202621043 GAGAAAGTTG---CTGGTGATTGTCCTTCTGCATCAACTGTTACTAAGGCTGCTGAGGTGACTGGCATAAGACTTCCAGTAACAGGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112306 85 + 190779 GAGAAAGTTG---CTGGTGATTGTCCTTCTGCATCAACTGTTACTAAGGCTGCTGAGGTGACTGGCATAAGACTTCCAGTAACAGGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2038 85 - 189199 GAGAAAGTTG---CTGGTGATTGTCCTTCTGGATCAACTGTTACTAAGGATGCTGAGGTGACTGGCATAAGACTTCCAGTAACAGGTA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573319 85 + 19675229 GAGGAAGTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTGGCATAAGACTTCTTGTAACAGGTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509538 85 + 16847902 GAGGAAGTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTGGCATAAGACTTCTTGTAACAGGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441766 85 - 91754291 GAGGAAGTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGGGGCTGCTGAAGTGACTGGCATGAGACTTCTTGTAACAGGTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615306 85 - 1977891 GAGGATGTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTGGCATAAGACTTCTTGTAACAGGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 478050 85 + 7796314 GAGGAAGTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTAGCATAAGACTTCTTGTAACAGGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 959773 85 - 74750902 GAGAAAGTTG---CAGAGGATTCTCCTTCTGGTTCGACTGTTATTGAGGCTACTGAGGTGACTGGCATAAGACTTCCTGTAACAGGTA i calJac3.chr17 C 0 I 1845 s saiBol1.JH378146 482849 85 + 17725628 GAGAAAGTTG---CAGGTGATTCTCCTTCTGGTTCAGCTGTCATTGAGGCTACTGAGGTGACTGGCATGAGACTTCCTGTAACGGGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 447789 85 - 6778120 GAGGAAGTTG---CAGGCGATTCTCCTTCTGGTTCAACTGGTATTGAGGCTACTGAGGTGACGGGCATAAGACTTCCTGTAACGGGTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2592 82 - 3732694 GAGGAGGTTG---CTGGTGATTGTCCTTCTGGCTTAGCTGTTACTGAGGCTGCAGAGGTGACCGGCATAAGATTTCCAGTAAGTG--- i aotNan1.NW_018507959v1 C 0 I 1 s mm10.chr16 65456716 82 - 98207768 ATGAGTGTTGACACTGGTGACAGTTTTTGTGGTGTAGATGTTGTTGAGACTTTCGTGGTATGTGTTGTAGAGTTCTGAGTAA------ i mm10.chr16 I 1 C 0 s canFam3.chr33 29088745 85 + 31377067 GAAGAGTGTG---CTGGTGAGTGTCCCCCTGGTCCACCTGTCATTGAGTCTGTTGAGCTGACTGGTGTAACACTTCCCGTTTCAGGTG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3915640 85 + 6579706 AGAGAAGTTG---AGACTGACTGTGCTGCTGGCCGCCCAGTTGTTGCGGCCCCAGAGGCCGAGGGAGAGATGGTGCTAGGGGAGATCA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 455041 292 - 608964 T e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=7800.000000 s hg38.chr3_KI270779v1_alt 168540 1 + 205312 C s panTro5.chr3 200155693 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112391 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2123 1 - 189199 C i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573404 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509623 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441851 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615391 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 478135 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 961703 1 - 74750902 C i calJac3.chr17 I 1845 C 0 s saiBol1.JH378146 482934 1 + 17725628 C i saiBol1.JH378146 C 0 I 1497 s cebCap1.NW_016107444v1 447874 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 I 750 s dasNov3.JH569502 3915725 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 455041 292 - 608964 T e mm10.chr16 65456798 0 - 98207768 C e canFam3.chr33 29088830 1 + 31377067 I e aotNan1.NW_018507959v1 2674 1 - 3732694 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1214.000000 s hg38.chr3_KI270779v1_alt 168541 3 + 205312 TGA s calJac3.chr17 961704 3 - 74750902 AGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484432 3 + 17725628 TGT i saiBol1.JH378146 I 1497 C 0 s cebCap1.NW_016107444v1 448625 3 - 6778120 TGT i cebCap1.NW_016107444v1 I 750 C 0 s aotNan1.NW_018507959v1 2675 3 - 3732694 TGT i aotNan1.NW_018507959v1 I 1 C 0 s canFam3.chr33 29088831 3 + 31377067 TGA i canFam3.chr33 I 1 I 57 s dasNov3.JH569502 3915726 3 + 6579706 AGA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 455041 292 - 608964 T e mm10.chr16 65456798 0 - 98207768 C e panPan2.chrUn_NW_014024201v1 112392 0 + 190779 C e macNem1.NW_012014355v1 573405 0 + 19675229 C e colAng1.NW_012118932v1 478136 0 + 7796314 C e manLeu1.NW_012102020v1 615392 0 - 1977891 C e chlSab2.chr15 441852 0 - 91754291 C e cerAty1.NW_012004056v1 509624 0 + 16847902 C e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C e gorGor5.CYUI01000254v1 2124 0 - 189199 C e panTro5.chr3 200155694 0 + 202621043 C a score=1265868.000000 s hg38.chr3_KI270779v1_alt 168544 181 + 205312 TGATGTCTCCCC-----TG------GGTTTCCA------------AGAGTGGAGCCTGTGGAGGTTGTCACTGTTATCTTCTCTGATGTCATCATGGATGTGTTTGTGACACTACAGAGGGAT------GAGGTAGCTGTTTCACCTGAAGGAGATGTCTTCtgagaaacagtccctgtcaca-ttgtgtacacttggagaGAAAGAAGGA s panTro5.chr3 200155694 181 + 202621043 TGATGTCTCCCC-----TG------GGTTTCCA------------AGAGTGGAGCCTGTGGAGGTTGTCACTGTTATCTTCTCTGATGTCATCATGGATGTGTTTGTGACACTAGAGAGGGAT------GAGGTAGCTGTTTCACCTGAAGGAGATGTCTTCtgagaaacagtccctgtcaca-ttgtgtacacttggagaGAAGGAAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112392 181 + 190779 TGATGTCTCCCC-----TG------GGTTTCCA------------AGAGTGGAGCCTGTGGAGGTTGTCACTGTTATCTTCTCTGATGTCATCATGGATGTGTTTGTGACACTAGAGAGGGAT------GAGGTAGCTGTTTCACCTGAAGGAGATGTCTTCtgagaaacagtccctgtcaca-ttgtgtacacttggagaGAAGGAAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2124 181 - 189199 TGATGTCTCCCC-----TG------GGTTTCCA------------AGAGTGGAGCCTGTGGAGGTTGTCACTGTTATCTTCTCTGATGTAATCATGGATGTGTTTGTGACACTAGAGGGGGAT------GAGGTAGCTGTTTCACCTGAAGGAGATGTCTTCtgagaaacagtccctgtcaca-ttgtgtacacttggagaGAAGGAAGGA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573405 181 + 19675229 TGATGTCTCCCC-----TG------TGTTTCCA------------AGAGTGGAGTCTGTGGAGGTTGTCGTTGTTATCTTCTTTGATGTCATCATGGGTGTGTTTGTGACACTAAAGAGGGAT------GAGGTAGTTGTTTCACCTGGAGGAAATGTCTTCTGAGAAATAGTCCCTTTCACA-TTGTGTACACTTGGGGAGACGGAAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509624 181 + 16847902 TGATGTCTCCCC-----TG------TGTTTCCA------------AGAGTGGAGTCTGTGGAGGTTGTCGTCGTTATCTTCTTTGATGTCATCATGGGTGTGTTTGTGACACTAAAGAGGGAT------GAGGTAGTTGTTTCACCTGGAGGAAATGTCTTCTGAGAAATAGTCCCTTTCACA-TTGTGTACACTTGGGGAGAAGGAAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 441852 181 - 91754291 TGATGTCTCCCC-----TG------TGTTTCCA------------AGAGTGGAGTCTGTGGAGGTTGTCGTTGTTATCTTCTTTGATATCATCATGGGTGTGTTTGTGACACTAAAGAGGGAT------GAGGTAGTTGTTTCACCTGGAGGAAATGTCTTCTGAGAAATAGTCCCTTTCACA-TTGTGTACACTTGGGGAGAAGGAAGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615392 181 - 1977891 TGATGTCTCCCC-----TG------TGTTTCCA------------AGAGTGGAGTCTGTGGAGGTTGTCGTTGTTATCTTCTTTGATGTCATCATGGGTGTGTTTGTGACACTAACGAGGGAT------GAGGTAGTTGTTTCACCTGGAGGAAATGTCTTCTGAGAAATAGTCCCTTTCACA-TTGTGTACACTTGGGGAGAAGGAAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 478136 181 + 7796314 TGATGTCTCCCC-----TG------TATTTCCA------------AGAGTGGAGTCTGTGGAGGTTGTCATTGTTATCTCCTTTGATGTCATTATGGGTGTGTTTGTGACACTAGAGAGGGAT------GAGGTAGTTGTTTCACCTGGAGGAGATGTCTTCTGAGAAATAGTCCCTTTGACA-TTGTGTACACTTGGGGAGAAGGAAGGA i colAng1.NW_012118932v1 C 0 I 2273 s calJac3.chr17 961707 181 - 74750902 TGATGTCTCTGC-----TG------TGTTTCCA------------AGAGTGGAGTCTGTGGAGGCTGCCATTGTTATAGTCTTTGATACCATCACGGGTATGTTCGTGACACTAGAGAGGGAT------GAGGCAGCTGTTTCACCTGGAGGAGATGTGTCCTGAGAAACAGTCCCTGTCACA-TTGTGTGCACTTGGGGAGGAGGAAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484435 181 + 17725628 TGATGTCTCTGC-----TG------TGTTTCCA------------AGAGTGGAGTTTGTGAAGGTTGTCATTGTTATAGTCTTTGATATCATCATGGGTATGTTGGTGACACTAGAGAGGGAT------GAGGTAGCTGTTTCACCTGGAGGAGATGTGTCCTGAGAAACAGTCCCTGTCACA-TTGTGTGCACTTGGGGAGAAGGAAGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 448628 181 - 6778120 GGGTAGCTCTGC-----GG------TGTTTCCG------------TGAGTGGTGTCTGTGGAGGCTGCCATTGTTATAACCTTTGATGTCATCATGGATGTGTCCGTGACACTAGAGAGGAAT------GAGGCAGTCTTTTCATCTGGAGGAAATGTGTCCTGAGAAACTGTTGTGGTCACA-TTGTGTACACTTGGGGAGGATGAAACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2678 181 - 3732694 TGATATCCCCGC-----TG------TGTTTCCA------------AGAGTGGTGTCTGTAGAGGTTGTCATTGTTATAAACTTTGATGTCATCATGGATGTGTCCGTGACACTAGAGAGGAAT------GAGGCAGTTGTTTCATCTGGAGGAGATGTGTCCTGAGAAACTGTTGTGGTCACA-TTGTGTACACTTGGGGAGGAGGAAAGA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454749 181 - 608964 TGATGTGTGCTG-----TG------TATTCTGC------------GTAGTGGAGTCTGTGTAGGTTTGTGTGCTAGGTATGTCAGATGTCATCAGTGGTGTGTGGGTGGCACCAGACGTAGGG------GAGGTGGTTGTTTCACCTGTATGGGACGTTTCCTGAGAAACCGTTTTAGTAGGA-TGGTGTCCACTTTGGGTAGATGGAGGA i otoGar3.GL873829 T 292 C 0 s mm10.chr16 65456798 179 - 98207768 -------TCCTCAGAGTTG------TGTTTCCT------------GGAGCAGAGTCTGTAGAGGATGTTTGGGTGAGCACTTCTGTTGTAGTTAGTGATGTACTGCTGACACCAGAAGTAGAT------GGCTTGGTTCTTTTATCTGAAGATGATGTCACTTGAGACATTGTCTGTGCAGGAGTTGAGT-CACTTGTAGAGGTTGAAAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 29088891 199 + 31377067 TGATGTCGTTGC-----TGATGTGTTGCTTCCACTGGAAGATCTTGAAGTGTCACCAGGGGAGGCTGATGGTGTGGCCATTTCTGATAGTGTGGGAACTGTGTGGCTGACACTGGAAGGGGAC------GAAGTGTTTGGTGTGTCAGACAAGGCCGTGTCCTGGGTCGAGTCATCTGTAGTT-GTGTGTTGACTTTGGGAGGATGAGGGA i canFam3.chr33 I 57 C 0 s dasNov3.JH569502 3915729 184 + 6579706 -CGCGTGTCTCC-----CG------G--TTGCG------------TGGGTAGTGTCCGGCGCGCTTGCTGTGGCCGACAACGCAGTGCTTGCGGGAGCTGTGTGGCCGTGACTGGAGAGAGCTGGCGCAGAGGCTGTGGTCCCAGCGGGGGGGAATGGTTGCGGCGCAGCGCTTCCTGCAGTG-GTTTGGCTGGTTGCGGTGGATGGCGAT i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=723471.000000 s hg38.chr3_KI270779v1_alt 168725 110 + 205312 GTTGAAGTGGTTCT--------------GTGTGTTAG----------------GGTGCTGGTTTGAGATT---CCCTGGTGGTCTGCGTGCTCCGAGTCCAGTGGTTCTGAGAAGAAGCTGATGTGTCTTGGATAGAGGTCCT s panTro5.chr3 200155875 110 + 202621043 GTTGAAGTGGTTCT--------------GTGTGTTAG----------------GGTGCTGGTTTGAGATT---CCCTGGTGGTCTGCGTGCTCCGAGTCCAGTGCTTCTGAGATGAAGCTGATATGTCCTGATTAGAGGTCCT i panTro5.chr3 C 0 T 291 s panPan2.chrUn_NW_014024201v1 112573 110 + 190779 GTTGAAGTGGTTCT--------------GTGTGTTAG----------------GGTGCTGGTTTGAGATT---CCCTGGTGGTCTGCGCGCTCCGAGTCCAGTGCTTCTGAGATGAAGCTGATATGTCCTGATTAGAGGTCCT i panPan2.chrUn_NW_014024201v1 C 0 T 291 s gorGor5.CYUI01000254v1 2305 110 - 189199 GTTGAAGTGGTTCT--------------GTGTGTTAG----------------GGTGCTGGTTTGAGATT---CCCTGGTGGTCTGCGTGCTCCGAGTCCAGTGGTTCTGAGAAGAAGCTGATGTGTCTTGGGCAGAGTTCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573586 110 + 19675229 ATTGATGTGGTTCT--------------CTGTGTAAG----------------AGTGCTGGTTTGAGATT---CTTTGGTGGTCTCAGTGCTCTGAGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509805 110 + 16847902 ATTGATGTGGTTCT--------------CTGTGTAAG----------------AGTGCTGGTTTGAGACT---CTCTGGTGGTGTCTATGCTCTGAGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442033 110 - 91754291 ATTGATGTGGTTCT--------------CTGTGTAAG----------------AGTGCTGGTTTGAGACT---CTCTGGTGGTGTCTGTGCTCTGTGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615573 110 - 1977891 ATTGATGTGGTTCT--------------CTGTGTAAG----------------AGTGCTGGTTTGAGATT---CTTTGGTGGTCTCAGTGCTCTGAGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 480590 110 + 7796314 GTTGATGTGGTTCT--------------CTGTGTGAG----------------GGTGCCAGTTTCAGCTT---CGCCTGTGGTCTCCGTGCTCTGAGACTGGTGGTTCTGAGAAAAAGCTGATGTGTCCTGAGTAGAGGTCCT i colAng1.NW_012118932v1 I 2273 C 0 s calJac3.chr17 961888 110 - 74750902 GTTGATGTGATCAT--------------CTGTGTGAG----------------GGTGCTCCTTTGAGATT---CCCTCGTGGTCTCTGTGCTCTGAGTCTGGTAGTTCTGAGAAGAAGCTGATGTGTCCCAGATAGAGATCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484616 110 + 17725628 GCTGATGTGATCAT--------------CTGTGTGAG----------------GATGCTAGTTTGAGATT---CCCTGGTGGTCTCTGTGCTCTGAGTCTGGTAGTTCTGAGAAGAAGCTGACGTGTCCCAGATAGAGGTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 448809 110 - 6778120 GTTGATGTGGACAT--------------CTGTGTGAA----------------GGTGCTGGTTTGAGACT---CTCTGGTGGTCTCTGTGCTCTGAATCTGGTGGTTCTGAGAGGAAGCTGATGTGTCCTGGATAGAGGTCCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2859 110 - 3732694 GTTGATGTGGACAT--------------CTGTGGGAG----------------GGTGCTGGTTTGAGACT---CTCTGGTGATCTCTGTGCTCTGAATCTGGTGGTTCTGAGAGGAAGCTGATGTGTCCTGGATATGGGTCCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454930 110 - 608964 GTTGAAGCGCTCGC--------------CCACGTGAG----------------GGTGCTTGCTTGAGACT---CTCTGGTGGTCTTCCAGTCCTGGGTCTGAGTTCTCTCAGAAAATGCTGCTGTCTCTTGAGTGGACGTTCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65456977 83 - 98207768 GTTGATGTGACT------------------------------------------ATGTTGACTTGAGATT---TGCTGCTGGTCTGCTTGCTTCCAGTGTGTTGTCTCTGAGTAAGAGTTGAGGTGAT--------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29089090 110 + 31377067 GAGGATGTGATCAT--------------CGCTGAGAC----------------ACTGCTGGTTGCAGACT---CTGTGCTGGTCTCCATGGTCTGGGTCGTGTGACCCTGAGATGACACTGTTGTCTCCGGAGTAGAAGCCAG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3915913 143 + 6579706 GTGGATGTGGCAGTGGTGCCCACCACGGTCGTGTCAGTCAGCCTCAGGCCCGCTTTGCTGGTGTGAGGAGGAACCCCAGAGGTCCGTGTGTCTTGAGTTTGGTGAGCCTGCGAAATGGCTGCTGTGGCGTCAGGTGAGGTGCC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=-3694.000000 s hg38.chr3_KI270779v1_alt 168835 1 + 205312 -C s gorGor5.CYUI01000254v1 2415 1 - 189199 -C i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573696 1 + 19675229 -T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509915 1 + 16847902 -T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442143 1 - 91754291 -T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615683 1 - 1977891 -T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 480700 1 + 7796314 -C i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 961998 1 - 74750902 -C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484726 1 + 17725628 -C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 448919 1 - 6778120 -T i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2969 1 - 3732694 -T i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455040 1 - 608964 -T i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3916056 1 + 6579706 G- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65457060 0 - 98207768 C e canFam3.chr33 29089200 1 + 31377067 I e panPan2.chrUn_NW_014024201v1 112683 291 + 190779 T e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C e panTro5.chr3 200155985 291 + 202621043 T a score=6478.000000 s hg38.chr3_KI270779v1_alt 168836 3 + 205312 CAG s gorGor5.CYUI01000254v1 2416 3 - 189199 CAG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573697 3 + 19675229 GAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509916 3 + 16847902 GAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442144 3 - 91754291 GAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615684 3 - 1977891 GAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 480701 3 + 7796314 AAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 961999 3 - 74750902 GAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484727 3 + 17725628 GAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 448920 3 - 6778120 GAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2970 3 - 3732694 GAA i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65457060 1 - 98207768 --G i mm10.chr16 C 0 C 0 s canFam3.chr33 29089201 3 + 31377067 GTG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3916057 3 + 6579706 GTG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 455041 0 - 608964 C e panPan2.chrUn_NW_014024201v1 112683 291 + 190779 T e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C e panTro5.chr3 200155985 291 + 202621043 T a score=382335.000000 s hg38.chr3_KI270779v1_alt 168839 83 + 205312 GAAGTTG---TTCGTGATTGTCCTTCCTGTCCAGCTGTTATTGAGACTGCTGAGGTCACTGGGGTAGAACTTTCAGTTCCTGCTGT s gorGor5.CYUI01000254v1 2419 83 - 189199 AAAGTTG---TTCGTGATTGTCCTTCCTGTCCAGCTGTTATTGAGACTGCTGAGGTCACTGGGGTAGAACTTTCAGTTCCTGCTGT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573700 83 + 19675229 GACGTTG---TTTGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGTTGAGATCACTGGGGTAGAACTTTCAGTTCCTGGTGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 509919 83 + 16847902 GACGTTG---TTCGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAGATCGCTGGGGTAGAACTTTCAGTTCCTGGTGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442147 83 - 91754291 GACGTTG---TGTGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAGATCACTGGGGTAGAACTTTCAGTTCCTGGTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615687 83 - 1977891 GACGTTG---TTCGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAGATCGCTGGGGTAGAACTTTCAGTTCCTGGTGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 480704 83 + 7796314 GAGGTTG---CTGATGATTGTCCTTCTGGCTCAGCTGTTATTGAGACTGCTGATGTGACTTGGGTAGAACTTTCAGTTCCTGGTGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 962002 83 - 74750902 GAAGCCG---CTGTCCATTGTCCCTCTGGCTCAGCTGTTATGGAGGCTGCTGAAGGGACTGGAGTGGGACTTCTAGTTCTAGGGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484730 83 + 17725628 GAAGCCG---CTGCTGATTGTCCTTCTGGCTCAGCCGTTATGGAGGCTGCTGAAGGGACTGGGGTAGGACTTCTAGTTCCAGGGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 448923 83 - 6778120 GAAGTTG---TTTGTGATTGTCCTTCTGGTTCAGCTGTTATTGAGACTGCTGAGTTCACTGAGGTAGAACTTTTAGTTCCAGGTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 2973 80 - 3732694 GAAGTTG---TTTGTGATTGTCCTTCTGGTTCAGCTGTT---GAGACTGCTGAGTGCACTGAGGTAGAACTTTTAGTTCCAGGTGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455041 83 - 608964 GAAGTAG---TTCCCTTTGGTTTTTCTTGTGTAGGTGCTACTGAGGTGGCTGAGGTGACTCGTGTGAAATTTCCATTTCCAGGTGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457061 86 - 98207768 GGTGTTGACACTGTTGACATATTCTGGGATGAAGGTGTCAGTGAGACTTGTGCGGTGGCAGGTGTTAAACCTTGAGTTGTTATTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29089204 83 + 31377067 GAATGTG---CTGTTGAGTGTCCCTCTGGTCCACTTGTCATTGAGCCTGTTGAGCTGACTGGAGTAACACTTCCCGTGACACCTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916060 83 + 6579706 GAAGGCG---ATGTTGATTGCCTGCCCGGGGACCCCGGTGCTGAGACTCCAGAGGTGACGGGGCCCAGGGTGCTCATTTGGGAAAA i dasNov3.JH569502 C 0 C 0 e panPan2.chrUn_NW_014024201v1 112683 291 + 190779 T e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C e panTro5.chr3 200155985 291 + 202621043 T a score=38181.000000 s hg38.chr3_KI270779v1_alt 168922 4 + 205312 TGAT s panTro5.chr3 200155694 4 + 202621043 TGAT i panTro5.chr3 T 291 C 0 s panPan2.chrUn_NW_014024201v1 112392 4 + 190779 TGAT i panPan2.chrUn_NW_014024201v1 T 291 C 0 s gorGor5.CYUI01000254v1 2502 4 - 189199 TGAT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573783 4 + 19675229 TGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 510002 4 + 16847902 TGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442230 4 - 91754291 TGAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615770 4 - 1977891 TGAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 480787 4 + 7796314 TGAT i colAng1.NW_012118932v1 C 0 I 1994 s calJac3.chr17 962085 4 - 74750902 TGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484813 4 + 17725628 CGAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 449006 4 - 6778120 TGAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3053 4 - 3732694 TGAT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455124 4 - 608964 TGAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457147 4 - 98207768 TGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089287 4 + 31377067 TGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916143 4 + 6579706 CGAC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=230551.000000 s hg38.chr3_KI270779v1_alt 168926 34 + 205312 GTCTCTTCTGTGTTTCCAAGAGTG---------------GAGTCTGTGG s panTro5.chr3 200155698 34 + 202621043 GTCTCCCCTGGGTTTCCAAGAGTG---------------GAGCCTGTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112396 34 + 190779 GTCTCCCCTGGGTTTCCAAGAGTG---------------GAGCCTGTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2506 34 - 189199 GTCTCTTCTGTGTTTCCAAGAGTG---------------GAGTCTATGG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573787 34 + 19675229 GTCTCTTCTATGTTTCCAAGAGTG---------------GAGTCTGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 510006 34 + 16847902 GTCTCTTCTATGTTTCCAAGAGTG---------------GAGTCTGTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442234 34 - 91754291 GTCTCTTCTATGTTTCCAAGAGTG---------------GAGTCTGTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615774 34 - 1977891 GTCTCTTCTGTGTTTCCAAGAGTG---------------GAGTCTGTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 482785 34 + 7796314 GTCTCTTCTGTGTTTCCAAGAGTG---------------GAGTCTGTGG i colAng1.NW_012118932v1 I 1994 C 0 s calJac3.chr17 962089 34 - 74750902 GTCTCCTCAGTGATATTAGAAGTG---------------GACTCTGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484817 34 + 17725628 GTCTCCTCAGTGATATTACAAGTG---------------GACTCTGTAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 449010 34 - 6778120 GTCTCCTCTGTACTTTTAAGAGTA---------------GAGTCTGTGG i cebCap1.NW_016107444v1 C 0 I 735 s aotNan1.NW_018507959v1 3057 34 - 3732694 GTCTCCTCTGGGTTTCCAAGAGTG---------------GATTCTGTAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455128 34 - 608964 GTCTGTTGTGTGTTTTTGGGACTG---------------GAGTCTGTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457151 34 - 98207768 GTGTGTCCTGAGTCTACTGAGGTA---------------CTTTCTGTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29089291 49 + 31377067 ATGAGCCCTGTGTTGCCAGCAGTGCTGTTTCCTACTATTGACTCTGTGG i canFam3.chr33 C 0 I 9 s dasNov3.JH569502 3916147 34 + 6579706 GTGTCCCCTGAGGTTCCCAGGGTG---------------CTGTCAGGGC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=425670.000000 s hg38.chr3_KI270779v1_alt 168960 69 + 205312 AGGTTGTCATTGTTATA-----GTCTTT--------------GATGTCATCAT---G-------------------------------------AGTGTGTTGGTGACACTGGAGGGAAATGATGTGG------ s panTro5.chr3 200155732 69 + 202621043 AGGTTGTCACTGTTATC-----TTCTCT--------------GATGTCATCAT---G-------------------------------------GATGTGTTTGTGACACTAGAGAGGGATGAGGTAG------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112430 69 + 190779 AGGTTGTCACTGTTATC-----TTCTCT--------------GATGTCATCAT---G-------------------------------------GATGTGTTTGTGACACTAGAGAGGGATGAGGTAG------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2540 69 - 189199 AGGTTGTCATTGTTATA-----GTCTTT--------------GATGTCATCAT---G-------------------------------------AGTGTGTTGGTGACACTGGAGGGAAATGATGTGG------ i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573821 69 + 19675229 AGGTTGTCATTGCTATA-----GTCTTT--------------GATGTCATCAT---G-------------------------------------AGCGTGTTGGTGACACTGGAGGGAAATGATGTGG------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 510040 69 + 16847902 AGGTTGTCATTGCTATA-----GTCTCT--------------GATGTCATCAT---G-------------------------------------AGCGTGTTGGTGACACTGGAGGGAAATGATGTGG------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442268 69 - 91754291 AGGTTGTCATTGCTATA-----GTCTTT--------------GATGTCATCAT---G-------------------------------------AGCGTGTTGGTGACACTGGAGGGAAATGATGTGG------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615808 69 - 1977891 AGGTTGTCATTGCTATA-----GTCTCT--------------GATGTCATCAT---G-------------------------------------AGCGTGTTGGTGACACTGGAGGGAAATGATGTGG------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 482819 69 + 7796314 AGGTTGTCATTGTTATA-----GTCTTT--------------GATGCCATTAT---G-------------------------------------AGTGTGTTGGTGACACTGGAGGGAAATGATGTGG------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 962123 69 - 74750902 GGGTTGTCACTGTTATA-----GTCTTT--------------GATTTCATTAT---G-------------------------------------GGTGTGTTGCTGACACTGAAGGGGAATGAGGTGG------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484851 69 + 17725628 GGGTTGTCACTGTGACA-----GTCTTT--------------GATTTCATTAT---G-------------------------------------AGTGTGTTGCTGACACTAGAGGGGAATGAGGTGG------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 449779 69 - 6778120 AGGTTGTCATTGTCATA-----ACCTTT--------------GATGTCATCAT---G-------------------------------------GATGTGTTGCTGACACTGGAGGAAGATGAGGTGG------ i cebCap1.NW_016107444v1 I 735 I 2628 s aotNan1.NW_018507959v1 3091 69 - 3732694 ATGTTGTCATTGTTATA-----GTCTTT--------------GATGTCATCAT---G-------------------------------------AGTGTGTTGGTGACACTGTATGGGGATGAGGTGG------ i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455162 69 - 608964 -----ATCTTTCTGACCTGGGTACTTGT--------------GATGTCATCGG---G-------------------------------------GACGTGTTTTCGACATTGGCAGGTGGTGAGGTAG------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457185 69 - 98207768 AGGATGTTGTGGTTAAC-----ATGTGT--------------GTTGTACTTGG---A-------------------------------------GCTGAGCTGCTGATACTGGGAGCATGTGAGGTGG------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29089349 120 + 31377067 ATGTTGTTGCTGATGTG-----TTGCTTTTGCTGGAAGATGAGGTGTCCCCAG---GGGAGGCTGATGGTGTGGCCCTTTCTGTCACTGCAGAAGGTGTGTGGCTGACGGTGGAAGGGGACGAAGTGC------ i canFam3.chr33 I 9 C 0 s dasNov3.JH569502 3916181 78 + 6579706 GCGTTGGTGTTGCCCGC-----TGCTGT--------------GTGGTCGGCGCCCGG-------------------------------------GTGGTGTGGCTCTCCCCGGAGGGCAATGGGCTGAAGCCTG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=13544.000000 s hg38.chr3_KI270779v1_alt 169029 2 + 205312 TC s panTro5.chr3 200155801 2 + 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112499 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2609 2 - 189199 TC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573890 2 + 19675229 TC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 510109 2 + 16847902 TC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442337 2 - 91754291 TC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615877 2 - 1977891 TC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 482888 2 + 7796314 TC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 962192 2 - 74750902 TC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 484920 2 + 17725628 TC i saiBol1.JH378146 C 0 I 1497 s cebCap1.NW_016107444v1 452476 2 - 6778120 TT i cebCap1.NW_016107444v1 I 2628 C 0 s aotNan1.NW_018507959v1 3160 2 - 3732694 TC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455231 2 - 608964 TT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457254 2 - 98207768 TT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089469 2 + 31377067 TT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916259 2 + 6579706 TC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=371505.000000 s hg38.chr3_KI270779v1_alt 169031 66 + 205312 ATTTCATCTGGAGGAGCTGTCTCCTGCG-----TAACAGTCTCCATCACATTGTGTACACTTGGGGAAGAA--- s panTro5.chr3 200155803 66 + 202621043 GTTTCACCTGAAGGAGATGTCTTCtgag-----aaacagtccctgtcacattgtgtacacttggagaGAAG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112501 66 + 190779 GTTTCACCTGAAGGAGATGTCTTCtgag-----aaacagtccctgtcacattgtgtacacttggagaGAAG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2611 66 - 189199 ATTTCATCTGGAGGAGCTGTCTCCTGAG-----GAACAGTCTCCATCACATTGTGTACACTTGGGGAAGAA--- i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573892 66 + 19675229 ATTTCATCTGCAGGAGACGTCTTTTGAG-----AAACAGTCTCCGTCCCATTGAGTACACTTGGGGAAGAG--- i macNem1.NW_012014355v1 C 0 I 753 s cerAty1.NW_012004056v1 510111 66 + 16847902 ATTTCATCTGCAGGAGACGTCTTTTGAG-----AAACAGTCTCCATCCCATTGAGTACACTTGGGGAAGAG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 442339 66 - 91754291 ATTTCATCTGCAGGAGACGTCTTTTGAG-----AAACAGTCTCCATCCCATTGAGTACACTTGGGGAAGAG--- i chlSab2.chr15 C 0 I 753 s manLeu1.NW_012102020v1 615879 66 - 1977891 ATTTCATCTGCAGGAGACGTCTTTTGAG-----AAACAGTCTCCGTCCCATTGAGTGCACTCGGGGAAGAG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 482890 66 + 7796314 ATTTCTTCTGTAGGGGATGTCTCCCAAG-----AAACAGCATCTGTCTCATTGAGTACACTTGGGGAAGAG--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 962194 66 - 74750902 ATTTCATCCGGAGGGGATGTCTCCTGAG-----GAACAGCGTCTGTCACATTCAGTACACTTGGGGAAGAG--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486419 66 + 17725628 ATTTCACCTGGAGGTGCTGTCTCCTGAG-----AAACAGCTGCTGTCACATTGTGTACACTTGGGGGAGAT--- i saiBol1.JH378146 I 1497 C 0 s cebCap1.NW_016107444v1 452478 66 - 6778120 GTTTCGCCTGGAGGTGCTGTCTTCTGAG-----AAACAGTTGCTGTCACATTGTGTACACTTGGGGGGGAT--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3162 66 - 3732694 ATTTCATCTGGAGGGACTGTCTCCTGAG-----GAACAGTGTCTGTCACATTCAGTACACTTGGGGAAAAT--- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455233 60 - 608964 GTTTCATTTGAAGTCATTGTCATTTTAGTAATTAAAGAGCTT-----------TGTCCATTTGAAGAGGAT--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457256 66 - 98207768 GTTCCATCAGGAGAGATTGTTCTTTGAG-----AACTTGTCTCTGTCTGTATTTGGTCACGTGAGGAGGCT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29089471 66 + 31377067 GGTGTGTGAGACATGGTCGTGTCCTGGG-----TTGTGCCATCTGTAGGAGTGTCTCCTCTTTGGGAGGAT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916261 69 + 6579706 CTTGAACCTGCGGTGGCTGTATCCAGAC-----GACCACTTTCTGAGGCCGAGTGTGCACTTGGGCTGGATGAA i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=32280.000000 s hg38.chr3_KI270779v1_alt 169097 4 + 205312 AAAA s panTro5.chr3 200155869 4 + 202621043 GAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112567 4 + 190779 GAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2677 4 - 189199 AAAA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574711 4 + 19675229 GAAA i macNem1.NW_012014355v1 I 753 C 0 s cerAty1.NW_012004056v1 510177 4 + 16847902 GAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443158 4 - 91754291 GAAA i chlSab2.chr15 I 753 C 0 s manLeu1.NW_012102020v1 615945 4 - 1977891 GAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 482956 4 + 7796314 GAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 962260 4 - 74750902 GAAA i calJac3.chr17 C 0 I 753 s saiBol1.JH378146 486485 4 + 17725628 GAAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452544 4 - 6778120 GAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3228 4 - 3732694 GAAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455293 4 - 608964 GAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457322 4 - 98207768 GAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29089537 4 + 31377067 GAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916330 4 + 6579706 GAAG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=87888.000000 s hg38.chr3_KI270779v1_alt 169101 15 + 205312 GAGTTGATGT---------CATCA s panTro5.chr3 200155873 15 + 202621043 GAGTTGAAGT---------GGTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112571 15 + 190779 GAGTTGAAGT---------GGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2681 15 - 189199 GAGTTGATGT---------CATCA i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574715 15 + 19675229 GAGTTGATGT---------TATCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 510181 15 + 16847902 GAGTTGATGT---------CATCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443162 15 - 91754291 GAGTTGATGT---------TATCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615949 15 - 1977891 GAGTTGATGT---------CATCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 482960 15 + 7796314 AAGTTGATGT---------CATCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963017 15 - 74750902 GAGTTGATGT---------AGTTC i calJac3.chr17 I 753 C 0 s saiBol1.JH378146 486489 15 + 17725628 GAGGTGATGT---------GGACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452548 15 - 6778120 GAGGTGATGT---------GGACA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3232 15 - 3732694 GAGTTGATGT---------GGTTC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455297 15 - 608964 TAAGTGGTGT---------TGTCA i otoGar3.GL873829 C 0 T 369 s mm10.chr16 65457326 15 - 98207768 GAGTTGATGT---------GGTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29089541 15 + 31377067 GAGAGGATGT---------GATCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916334 24 + 6579706 TGGTGGGCGTGTCGGACCGGACCA i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=185988.000000 s hg38.chr3_KI270779v1_alt 169116 29 + 205312 TCTGCGT---GAGGGTGT---------CGGTTTGAGCTTTG s panTro5.chr3 200155888 29 + 202621043 TGTGTGT---TAGGGTGC---------TGGTTTGAGATTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112586 29 + 190779 TGTGTGT---TAGGGTGC---------TGGTTTGAGATTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2696 29 - 189199 TCTGTGT---GAGGGTGT---------CAGTTTGAGCTTTG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574730 29 + 19675229 TCTGTGT---GAGGGTGC---------CAGTTTGAGCTTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 510196 29 + 16847902 TCTGTGT---GAGAGTGC---------TGGCTTGAGCTTCG i cerAty1.NW_012004056v1 C 0 I 1092 s chlSab2.chr15 443177 29 - 91754291 TCTGTGT---GAGGGTGC---------CAGTTTGAGCTTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 615964 29 - 1977891 TCTGTGT---GAGAGTGC---------TGGTTTGAGCTTCG i manLeu1.NW_012102020v1 C 0 I 3351 s colAng1.NW_012118932v1 482975 29 + 7796314 TCTGTGT---GAGGGTGC---------CAGTTTGAGCTTCG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963032 29 - 74750902 CCTGTGT---GAGGGTGC---------TGGTTTGAGCTTCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486504 29 + 17725628 TCTGTGT---GAGGGTGG---------TGGTTTGAGCTTCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452563 29 - 6778120 TCTGGGT---AAGGGTGG---------TGGTTTGAGCTTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3247 29 - 3732694 TCTGCGG---GAGGGTGC---------TGGTTTGAGCTTCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454943 29 - 608964 CCCACGT---GAGGGTGC---------TTGCTTGAGACTCT i otoGar3.GL873829 T 369 C 0 s mm10.chr16 65457341 29 - 98207768 CCTCGGT---GGTTGTGG---------TGGTTTGAGGTTTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29089556 29 + 31377067 TCGCTGA---GACACTGC---------TGGTTGCAGACTCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916358 41 + 6579706 TGTGTGTCCCGGGGAGGCCTGATGCCGTGGTCGGGGACTCG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=117299.000000 s hg38.chr3_KI270779v1_alt 169145 14 + 205312 CTGGTGGTCTCCGT s panTro5.chr3 200155917 14 + 202621043 CTGGTGGTCTGCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112615 14 + 190779 CTGGTGGTCTGCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2725 14 - 189199 CTGGTGGTCTCCGT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574759 14 + 19675229 CTGGTGGTCTCTAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 511317 14 + 16847902 CTGGTGGTCTCCAT i cerAty1.NW_012004056v1 I 1092 C 0 s chlSab2.chr15 443206 14 - 91754291 CTGGTGGTCTCTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619344 14 - 1977891 CTGGTGGTCTCCAT i manLeu1.NW_012102020v1 I 3351 C 0 s colAng1.NW_012118932v1 483004 14 + 7796314 CTGGTGGTCTCTGT i colAng1.NW_012118932v1 C 0 I 714 s calJac3.chr17 963061 14 - 74750902 CTGGTGCTCTCCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486533 14 + 17725628 CTGCTGGTCTCCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452592 14 - 6778120 CTGGTGGTCTCCGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3276 14 - 3732694 CCGGTGGTCTCCGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 454972 14 - 608964 CTGGTGGTCTTCCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457370 11 - 98207768 ---CTGGTCTCCAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089585 14 + 31377067 GTGCTGGTCTCCAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916399 14 + 6579706 AGGGTGGTCTGTGC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=28170.000000 s hg38.chr3_KI270779v1_alt 169159 4 + 205312 GCTC s panTro5.chr3 200155931 4 + 202621043 GCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112629 4 + 190779 GCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2739 4 - 189199 GCTC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574773 4 + 19675229 GCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 511331 4 + 16847902 GCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443220 4 - 91754291 GCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619358 4 - 1977891 GCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483732 4 + 7796314 GCTC i colAng1.NW_012118932v1 I 714 C 0 s calJac3.chr17 963075 4 - 74750902 GCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486547 4 + 17725628 GCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452606 4 - 6778120 GCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 3290 4 - 3732694 GCTC i aotNan1.NW_018507959v1 C 0 I 723 s otoGar3.GL873829 454986 4 - 608964 GTCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457381 4 - 98207768 GCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089599 4 + 31377067 GGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916413 4 + 6579706 GCCT i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=255615.000000 s hg38.chr3_KI270779v1_alt 169163 33 + 205312 TTAGTCTGGTGGTTCTGAGATGAAGCTGATATG s panTro5.chr3 200155935 33 + 202621043 CGAGTCCAGTGCTTCTGAGATGAAGCTGATATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112633 33 + 190779 CGAGTCCAGTGCTTCTGAGATGAAGCTGATATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2743 33 - 189199 TTAGTCTGGTGGTTCTGAGATGAAGCTGATATG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574777 33 + 19675229 TGAGTCTGGTGGTTCTGAGAAGAAGCTGATGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 511335 33 + 16847902 TTAGTCTGGTGGTTCTGAGATGAAGCTGATATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443224 33 - 91754291 TGAGTCTGGTGGTTCTGAGAAGAAGCTGATGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619362 33 - 1977891 TTAGTCTGGTGGTTCTGAGATGAAGCTGATATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483736 33 + 7796314 TTAGTCTGGTGGTTCTGAGATGAAGCTGATATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963079 33 - 74750902 TGAGTCTGGTGGTTCTGAGATGAAGCTGATATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486551 33 + 17725628 TGAGTCTGGTGGTTCTGAGATGAAGCTGATATT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452610 33 - 6778120 TGAGTCTGGTGGTTCTGAGATGAAGCTGATATT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4017 33 - 3732694 TGAGTCTGGTGGTTCTGAGATGAAGCTGATATT i aotNan1.NW_018507959v1 I 723 C 0 s otoGar3.GL873829 454990 33 - 608964 TGGGTCTGAGTTCTCTCAGAAAATGCTGCTGTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65457385 33 - 98207768 GTAGTATGATGGCTCTGAGAAACTGTTGTTATG i mm10.chr16 C 0 T 4746 s canFam3.chr33 29089603 33 + 31377067 TGGGTCGTGTGACCCTGAGATGACACTGTTGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916417 33 + 6579706 TGAGTGTGCCCCCTCTCAGAAACAGCCGACGAC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=15544.000000 s hg38.chr3_KI270779v1_alt 169196 2 + 205312 TC s panTro5.chr3 200155968 2 + 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112666 2 + 190779 TC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2776 2 - 189199 TC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 574810 2 + 19675229 TC i macNem1.NW_012014355v1 C 0 T 1509 s cerAty1.NW_012004056v1 511368 2 + 16847902 TC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443257 2 - 91754291 TC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619395 2 - 1977891 TC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483769 2 + 7796314 TC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963112 2 - 74750902 CC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486584 2 + 17725628 TC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452643 2 - 6778120 TC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4050 2 - 3732694 TC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455023 2 - 608964 TC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452672 1 - 98207768 T- i mm10.chr16 T 4746 C 0 s canFam3.chr33 29089636 2 + 31377067 TC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916450 2 + 6579706 TC i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=239869.000000 s hg38.chr3_KI270779v1_alt 169198 37 + 205312 CTGATTAGAGGTCCTTGAAGAAGCTGCAGTTGAT-TGT s panTro5.chr3 200155970 37 + 202621043 CTGATTAGAGGTCCTTGAAGAAGCTGCAGTTGAT-TGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112668 37 + 190779 CTGATTAGAGGTCCTTGAAGAAGCTGCAGTTGAT-TGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2778 37 - 189199 CTGATTAGAGGTCCTTGAAGAAGCTGTAGTTGAT-TGT i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573303 37 + 19675229 CTGAGTAGAAGTCCTTGAGGAAGTTGCTGGTAAT-TGT i macNem1.NW_012014355v1 T 1509 C 0 s cerAty1.NW_012004056v1 511370 37 + 16847902 CTGATTAGAGGTCCTTGAAGAAGTGGCAGTTGAT-TGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443259 37 - 91754291 TTGCGTAGAGGTCCTCGAGGAAGTTGTTTGTGAT-TGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619397 37 - 1977891 CTGATTAGAGGTCCTTGAAGAAGTGGCAGTTGAT-TGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483771 37 + 7796314 CTGATTAGAGGTCCTTGAAGAAGTTGCAGTTGAT-TGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963114 37 - 74750902 CTGATTAGAGGTTCTTAAAGAAGTTGCTGTTGAT-TGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486586 37 + 17725628 CTGATTAGAGGTTCTCAAAGAAGTTGCTGTTGAT-TGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452645 34 - 6778120 CTGATTGGAGGTTCTC---GAAGTTGCTGTTGAT-TGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4052 37 - 3732694 CCGATTAGAGGTTCTCAAAGAAGTTGCTGTTGAT-TGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455025 37 - 608964 TTGAGTGGACGTTCTTGAAGTAGTTCCCTTTGGT-TTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452673 38 - 98207768 TTGAATTGAGGTGATGGGTGCTGACACTGTTGACATGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089638 37 + 31377067 CGGAGTAGAAGTCAGGGTGGAATGTGCTGTTGAG-TGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916452 36 + 6579706 CGCAGGAGAAGGGCTGGCAGAGGATGGTGTTGAG-CG- i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=24147.000000 s hg38.chr3_KI270779v1_alt 169235 3 + 205312 CCC s panTro5.chr3 200156007 3 + 202621043 CCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112705 3 + 190779 CCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2815 3 - 189199 CCC i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573340 3 + 19675229 CCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 511407 3 + 16847902 CCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443296 3 - 91754291 CCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619434 3 - 1977891 CCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483808 3 + 7796314 CCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963151 3 - 74750902 CCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486623 3 + 17725628 CCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452679 3 - 6778120 CCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4089 3 - 3732694 CCC i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29089675 3 + 31377067 CCC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 455062 0 - 608964 C e mm10.chr16 65452711 0 - 98207768 C e dasNov3.JH569502 3916488 0 + 6579706 C e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=241223.000000 s hg38.chr3_KI270779v1_alt 169238 38 + 205312 TCTAGTGTCGCTGTTGTTGAGCCTGTTGAGGTGACTGG s panTro5.chr3 200156010 38 + 202621043 TCTAGTGTCACTGTTGTTGAGCCTGTTGAGGTGACTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112708 38 + 190779 TCTAGTGTCACTGTTGTTGAGCCTGTTGAGGTGACTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2818 38 - 189199 TCTAGTGTCGCTGTTGTTGAGCCTGTTGAGGTGACTGG i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 573343 38 + 19675229 TCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTGG i macNem1.NW_012014355v1 C 0 I 15096 s cerAty1.NW_012004056v1 511410 38 + 16847902 TCGAGTGTCACTGCTGCTGAGCCTGCTGAGATAACTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443299 38 - 91754291 TCCAGTTCAGCTGTTATTGAGACTGCTGAGGTCACTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 619437 38 - 1977891 TCGAGTGTCACTGCTGCTGAGCCTACTGAGATGACTGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483811 38 + 7796314 TCTAGTGTCATTGCTGCTGAGCCTGCTGAGGTGACTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963154 38 - 74750902 TCTAGTGTAGCTGTTATCGAGCCTGCTGAGGTGACTAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486626 38 + 17725628 GCTAGCGTAGCTGTTACTGAGCCTGCTGAGGGGATGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452682 38 - 6778120 TCTAGTATAGCTGTTATTGAGCCTGCTGAGGTGACTAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4092 38 - 3732694 TCTAGTGTAGCTGTTACCGCGCCTGCTGAGGTGACTAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455062 38 - 608964 TCTTGTGTAGGTGCTACTGAGGTGGCTGAGGTGACTCG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65452711 34 - 98207768 TCTGG----GATGAAGGTGAGACCTGTGTGGTGGCAGG i mm10.chr16 C 0 I 1 s canFam3.chr33 29089678 38 + 31377067 TCTGGTCCACTTGTCATTGAGCCTGTTGAGCTGACTGG i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3916488 33 + 6579706 CCTTGTGGCGC-----CCGCACTTGTTGAGGCATCCGG i dasNov3.JH569502 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1065.000000 s hg38.chr3_KI270779v1_alt 169276 2 + 205312 GG s panTro5.chr3 200156048 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112746 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2856 2 - 189199 GG i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 511448 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 443337 2 - 91754291 GG i chlSab2.chr15 C 0 I 2617 s manLeu1.NW_012102020v1 619475 2 - 1977891 GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483849 2 + 7796314 AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963192 2 - 74750902 GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486664 2 + 17725628 GG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452720 2 - 6778120 GG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4130 2 - 3732694 GG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455101 1 - 608964 G- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65452746 1 - 98207768 G- i mm10.chr16 I 1 C 0 s canFam3.chr33 29089717 1 + 31377067 G- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3916521 2 + 6579706 GG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 573381 15096 + 19675229 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=108368.000000 s hg38.chr3_KI270779v1_alt 169278 25 + 205312 ---CAGGAGTTTTACTTCCAGTTATTAA s panTro5.chr3 200156050 25 + 202621043 ---CAGGAGTTTTACTTCCAGTTGTTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112748 25 + 190779 ---CAGGAGTTTTACTTCCAGTTGTTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2858 25 - 189199 ---CAGGAGTTTTACTTCCAGTTGTTAA i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 511450 25 + 16847902 ---CAGGAGTTTTACTTCCAGTTGTTGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 619477 25 - 1977891 ---CAGGAGTTTTACTTCCAGTTGTTGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 483851 25 + 7796314 ---TAGGATTTTTACTTCCAGTTGTTGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963194 25 - 74750902 ---CAGTGTTTTCACTTCCAGTTGTTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486666 25 + 17725628 ---CCGTGTTTTCCCTTCCAGGTGTTGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452722 25 - 6778120 ---CAGTGTTTTTACTTCCAATTGTTGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4132 25 - 3732694 ---CAGTGTTTTCACTTCCAGTTGTTGA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455102 25 - 608964 ---TGAAATTTCCATTTCCAGGTGTTGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452747 25 - 98207768 ---TAGAACCTTGAGTTGTTATTGCTGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089718 25 + 31377067 ---TAACACTTCCCGTGACACCTGGTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916523 28 + 6579706 TGCCGGTGCCACTGGTACCTGTAGGTGA i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 573381 15096 + 19675229 I e chlSab2.chr15 443339 2617 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=136472.000000 s hg38.chr3_KI270779v1_alt 169303 22 + 205312 TGTGTCCTCTGTGGTTCCTGGA s panTro5.chr3 200156075 22 + 202621043 TGTGTCCTCTGTGGTTCCTGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112773 22 + 190779 TGTGTCCTCTGTGGTTCCTGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2883 22 - 189199 TGTGTCCTCTGTGGTTCCTGGA i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 511475 22 + 16847902 TGTTTCCCCTGTGGTTCCCGGA i cerAty1.NW_012004056v1 C 0 I 7130 s chlSab2.chr15 445956 22 - 91754291 TGTTTCCCCTGTGGTTCCTGGA i chlSab2.chr15 I 2617 C 0 s manLeu1.NW_012102020v1 619502 22 - 1977891 TGTTTCCCCTGTGGTTCCCGGA i manLeu1.NW_012102020v1 C 0 I 16110 s colAng1.NW_012118932v1 483876 22 + 7796314 TGTTTCCCCTGTGGTTCCTGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 963219 22 - 74750902 TGTTTCCTCTGTGCTTCCTGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486691 22 + 17725628 TGTTTCCTCTGTGGTTCCTGGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452747 22 - 6778120 TGTTTCTTCTTTGGTTCCTGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 4157 22 - 3732694 TGTTTCCTCTGTGGTTCCTGGA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 455127 22 - 608964 TGTCTGTTGTGTGTTTTTGGGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452772 22 - 98207768 TGTGTGTCTTGTGTCTACTGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29089743 22 + 31377067 CATGGACCCTGTGTTGACAGCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3916551 22 + 6579706 GACGTCCCCGGGATTGCCTTGG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 573381 15096 + 19675229 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=21853.000000 s hg38.chr3_KI270779v1_alt 169325 3 + 205312 GTG s panTro5.chr3 200156097 3 + 202621043 GTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112795 3 + 190779 GTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2905 3 - 189199 GTG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 445978 3 - 91754291 GTG i chlSab2.chr15 C 0 I 5969 s colAng1.NW_012118932v1 483898 3 + 7796314 GTG i colAng1.NW_012118932v1 C 0 I 7473 s calJac3.chr17 963241 3 - 74750902 GTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486713 3 + 17725628 GTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 452769 3 - 6778120 GTG i cebCap1.NW_016107444v1 C 0 I 8388 s aotNan1.NW_018507959v1 4179 3 - 3732694 GTG i aotNan1.NW_018507959v1 C 0 I 17683 s otoGar3.GL873829 455149 3 - 608964 CTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452794 3 - 98207768 GTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29089765 3 + 31377067 GTG i canFam3.chr33 C 0 I 3246 s dasNov3.JH569502 3916573 3 + 6579706 GTG i dasNov3.JH569502 C 0 I 13007 e macNem1.NW_012014355v1 573381 15096 + 19675229 I e manLeu1.NW_012102020v1 619524 16110 - 1977891 I e cerAty1.NW_012004056v1 511497 7130 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=745.000000 s hg38.chr3_KI270779v1_alt 169328 1 + 205312 A s panTro5.chr3 200156100 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112798 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2908 1 - 189199 A i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 963244 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 486716 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 455152 1 - 608964 G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65452797 1 - 98207768 A i mm10.chr16 C 0 I 7514 e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e macNem1.NW_012014355v1 573381 15096 + 19675229 I e colAng1.NW_012118932v1 483901 7473 + 7796314 I e manLeu1.NW_012102020v1 619524 16110 - 1977891 I e chlSab2.chr15 445981 5969 - 91754291 I e cerAty1.NW_012004056v1 511497 7130 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1911.000000 s hg38.chr3_KI270779v1_alt 169329 1 + 205312 a s panTro5.chr3 200156101 1 + 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112799 1 + 190779 a i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2909 1 - 189199 a i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 963245 1 - 74750902 A i calJac3.chr17 C 0 I 8726 s saiBol1.JH378146 486717 1 + 17725628 A i saiBol1.JH378146 C 0 I 4546 s otoGar3.GL873829 455153 1 - 608964 A i otoGar3.GL873829 C 0 I 3663 e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e macNem1.NW_012014355v1 573381 15096 + 19675229 I e colAng1.NW_012118932v1 483901 7473 + 7796314 I e manLeu1.NW_012102020v1 619524 16110 - 1977891 I e chlSab2.chr15 445981 5969 - 91754291 I e cerAty1.NW_012004056v1 511497 7130 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=57036.000000 s hg38.chr3_KI270779v1_alt 169330 101 + 205312 ccaaaataggcaagcagagagctaaatcatgaatgaactcctattcacaattgctacaaatagaataaaatacctaggaatacagctaacaaaggatgtga s panTro5.chr3 200156102 101 + 202621043 ccaaaataggcaagcagagagctaaatcatgaatgaactcctattcacaattgctacaaatagaataaaatacctaggaatacagctaacaaaggatgtga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112800 101 + 190779 ccaaaataggcaagcagagagctaaatcatgaatgaactcctattcacaattgctacaaatagaataaaatacctaggaatacagctaacaaaggatgtga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 2910 101 - 189199 ccaaaataggcaagcagagagctaaatcatgaatgaactcctattcacaattgctacaaatagaataaaatacctaggaatacagctaacaaaggatgtga i gorGor5.CYUI01000254v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e macNem1.NW_012014355v1 573381 15096 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 483901 7473 + 7796314 I e manLeu1.NW_012102020v1 619524 16110 - 1977891 I e chlSab2.chr15 445981 5969 - 91754291 I e cerAty1.NW_012004056v1 511497 7130 + 16847902 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=148591.000000 s hg38.chr3_KI270779v1_alt 169431 79 + 205312 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaatcaaaaaagaacccaaatagccaaga s panTro5.chr3 200156203 79 + 202621043 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaatcaaaaaagaacccaaatagccaaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112901 79 + 190779 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaatcaaaaaagaacccaaatagccaaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3011 79 - 189199 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaatcaaaaaagaacccaaatagccaaga i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 518627 79 + 16847902 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaaccaaaaaagagcccgaataaccaaga i cerAty1.NW_012004056v1 I 7130 C 0 s chlSab2.chr15 451950 79 - 91754291 aaactaccattcttcaaagaatgagaacaaactactttaaaattcatatggaaccaaaaaagagcccgaataaccaaga i chlSab2.chr15 I 5969 C 0 s colAng1.NW_012118932v1 491374 79 + 7796314 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaaccaaaaaagagcccgaatagccaaga i colAng1.NW_012118932v1 I 7473 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e macNem1.NW_012014355v1 573381 15096 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 619524 16110 - 1977891 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=370116.000000 s hg38.chr3_KI270779v1_alt 169510 149 + 205312 caatcctaagcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatataaaccaatggaacagaatagataccttggaaataagaccacaca s panTro5.chr3 200156282 149 + 202621043 caatagtaagcaaaaagaacaaagtaggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgataccaaaactgacatatagaccaatggaacagaatagataccttggaaataagaccacaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 112980 149 + 190779 caatggtaagcaaaaagaacaaagtaggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatatagaccaatggaacagaatagataccttggaaataagaccacaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3090 149 - 189199 caatcctaagcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatataaaccaatggaacagaatagataccttggaaataagaccacaca i gorGor5.CYUI01000254v1 C 0 C 0 s cerAty1.NW_012004056v1 518706 148 + 16847902 caatcctaggcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatatagaccaatgg-acagaatagagaccttggaaataagaccacaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 452029 148 - 91754291 caatcctaggcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatatagaccaatgg-acagaatagagaccttggaaataagaccacaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 635634 148 - 1977891 caatcctaggcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatatagaccaatgg-acagaatagagaccttggaaataagaccacaca i manLeu1.NW_012102020v1 I 16110 C 0 s colAng1.NW_012118932v1 491453 148 + 7796314 caatcctaggcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaagcagcatggtactggtaccaaaactgacatatagaccaatgg-acagaatagagaccttggaaataagaccacaca i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e macNem1.NW_012014355v1 573381 15096 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=1035756.000000 s hg38.chr3_KI270779v1_alt 169659 331 + 205312 tctacaaccatctgat-ctttgacaaacctgacaaaagcaggcaatggtgaaaggattctctattcaataaatggtgctgggaaaactggttagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggcaggttaaagacttacatgtaaaaccccaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacatagacataggcaaagattttatgatgaaatctccaaaagcacttgcaacaaaagctaaaattgacaaatgggatctaattaaactaaagagctctgcaca s panTro5.chr3 200156431 331 + 202621043 tctacaaccatctgat-ctttgacaaacctgacaaaagcaggcaatggggaaaggattctctattcaataaatggtgctgggaaaactggttagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggcgggttaaagacttacatgtaaaaccccaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacatagacataggcaaagattttatgatgaaatctccaaaagcacttgcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagctctgcaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 113129 331 + 190779 tctacaaccatctgat-ctttgacaaacctgacaaaagcaggcaatggggaaaggattctctattcaataaatggtgctgggaaaactggttagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggcgggttaaagacttacatgtaaaaccccaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacatagacataggcaaagattttatgatgaaatctccaaaagcacttgcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagctctgcaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3239 331 - 189199 tctacaaccatctgat-ctttgacaaacctgacaaaagcaggcgatggggaaaggattctctattcaacaaatggtgctgggaaaactggttagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggcaggttaaagacttacatgtaaaaccccaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacatagacataggcaaagattttatgatgaaatctccaaaagcacttgcaacaaaagctaaaattgacaaatgggatctaattaaactaaagagctctgcata i gorGor5.CYUI01000254v1 C 0 C 0 s macNem1.NW_012014355v1 588477 328 + 19675229 tctacaaccatctgatgctttgacaaacctgacaaaagcaagcaatggggaaaggattctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggtggactaaagacttaaatgtaaagccccaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagataaaatagacaaatgggatctaattaaactaaagagttctgcaca i macNem1.NW_012014355v1 I 15096 C 0 s cerAty1.NW_012004056v1 518854 327 + 16847902 tctacaaccatctgat-ctttgacaaacctgacaaaagcaagcaatggggaaaggattctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggtggactaaagacttaaatgtaaagccccaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagataaaatagacaaatgggatctaattaaactaaagagctctgcaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 452177 327 - 91754291 tctacaaccatctgat-ctttgacaaacctgacaaaagcaagcaatggggaaaggattctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggtggactaaagacttaaatgtaaagctccaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagataaaatagacaaatgggatctaattaaactaaagagctctgcaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 635782 327 - 1977891 tctacaaccatctgat-ctttgacaaacctgacaaaagcaagcaatggggaaaggattctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggtggactaaagacttaaatgtaaagccccaaaccataaaaaccctagaagaaaacctaggcaataccatttaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagataaaatagacaaatgggatctaattaaactaaagagctctgcaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 491601 327 + 7796314 tctacaaccatctgat-ctttgacaaacctgacaaaagcaagcaatggggaaagatttctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaatattaactcaaggtggactaaagacttaaatgtaaagccccaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagctaaaatcaacaaatgggatctaattaaactaaagagctctgcaca i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I e nomLeu3.chr11 120914891 0 + 123690457 C a score=367828.000000 s hg38.chr3_KI270779v1_alt 169990 98 + 205312 gcaaaagaaactatcatcagagcaaacaggcaacctacaaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatccagaatttaca s panTro5.chr3 200156762 98 + 202621043 gcaaaagaaactatcatcagcgcaaacaggcaacctacaaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatccagaatttaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 113460 98 + 190779 gcaaaagaaactatcatcagcgcaaacaggcaacctacaaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatccagaatttaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3570 98 - 189199 gcaaaagaaactatcatcagagcaaacaggcaacctaaaaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatccagaatttaca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120914891 98 + 123690457 gcaaaagaaattattatcagagcaaacaggcaacctgtgaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatcccgaatttaca i nomLeu3.chr11 C 0 C 0 s macNem1.NW_012014355v1 588805 98 + 19675229 gcaaaagaaactatcatcagagcaaacaggcaacctacaaaatgagaaaatttttgcaatctacccatccgagagaagtctaatatccagaatttacc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 519181 98 + 16847902 gcaaaagaaactatcatcagagcaaacaggaaacctacaaaatgagaaaatttttgcaatctacccatctgagagaggtctaatatccagaatttacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 452504 98 - 91754291 gcaaaagaaactatcatcagagcaaacaggcaacctacaaaatgagaaaatttttgcaatctacccatctgagagaggtctaatatacagaatttatc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 636109 98 - 1977891 acaaaagaaactatcatcagagcaaacaggaaacctacaaaatgagaaaatttttgcaatctacccatctgagagaggtctaatatccagaatttacc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 491928 98 + 7796314 gcaaaagaaactatcatcagagcaaaccggcaacctacaaaacgagaaactttttgcagactacccatctgagagaggtctaacatccagaatttacc i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 98696 5347 + 192460366 I e rheMac8.chr2 202491706 5328 + 204787373 I a score=665782.000000 s hg38.chr3_KI270779v1_alt 170088 130 + 205312 aggaacttaaatttacaagaaaaaaataaacaaccccatcaaaaagcaggcaaaggatatgaacagacacttatcaaaagaaggcatttatgccaccaacaaacatatgaaaaaaggctcatcatcatgg s panTro5.chr3 200156860 130 + 202621043 aggaacttaaatttacaagaaaaaaataaacaaccccatcaaaaagcaggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaacaaacatatgaaaaaaagctcatcatcatgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 113558 130 + 190779 aggaacttaaatttacaagaaaaaaataaacaaccccatcaaaaagcaggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaacaaacatatgaaaaaaagttcatcatcatgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3668 130 - 189199 aggaacttaaatttacaagaaaaaaataaacaaccccatcaaaaagcgggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaacaaacatatgaaaaaaagctcatcatcatgg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120914989 128 + 123690457 aggaagttaaatttacgagaaaaaaataaacaaccccatcagaaagcgggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaaccaac--atgcaaaaaagctcatcatcatgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202497034 126 + 204787373 aggaatttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaaggatatg-ataggcacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatgg i rheMac8.chr2 I 5328 C 0 s macFas5.chr2 104043 126 + 192460366 aggaatttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaaggatatg-ataggcacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatgg i macFas5.chr2 I 5347 C 0 s macNem1.NW_012014355v1 588903 126 + 19675229 aggaacttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaaggatatg-ataggcacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 519279 126 + 16847902 aggaacttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaaggatatg-ataggcacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 452602 126 - 91754291 aggaacttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaagaatatg-ataggcacttatcaaaagaagacatttatgccgccagcaaacatatgaaaaaaagcttataatcatgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 636207 126 - 1977891 aggaacttaaatttacaagacaaa---aaacaaacccctcaaaaagtgggcaaaggatatg-ataggaacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatgg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 492026 126 + 7796314 aggaacttaaatttacaagacaaa---aaacaacctcatcaaaaagtgggcacaggatacg-acaggcacttatcaaaagaagacatgtatgccatcagcaaacatatgaaaaaaagcttataatcatgg i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 4182 17683 - 3732694 I e cebCap1.NW_016107444v1 452772 8388 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=4226942.000000 s hg38.chr3_KI270779v1_alt 170218 559 + 205312 atcattagagaaatgcaaatcaaaactacaaagggatatcatctcacaccactcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacgcttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaagatacatgcacacgtatgtttactgcagcactatttacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatgcagcacggaatactatgcagccat-gaaaaaggaatgggatcacgtcctttgcaggtacatggatgaagctgaaagccatcatcctcaacaaactaacaggggaacagaaaaccaaacactgcatgttttcactcataagttggagttgaacaatgagaacacatggacacagagag s panTro5.chr3 200156990 559 + 202621043 atcattagagaaatgcaaatcaaaactacaatgggatatcatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacacttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaagatacatgcacacgtatgtttactgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatgcagcacggaatactatgcagccat-aaaaaaggaatgggatcacatcctttgcaggtacatggatgaagctggaagccatcatcctcaacaaactaacaggggaacagaaaaccaaacactgcatgttttcactcataagttggagttgaacaatgagaacacttggacacagggag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 113688 559 + 190779 atcattagagaaatgcaaatcaaaactacaatgggatatcatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacacttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaagatacatgcacacgtatgtttactgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatgcagcacggaatactatgcagccat-aaaaaaggaatgggatcacatcctttgcaggtacatggatgaagctggaagccatcatcctcaacaaactaacaggggaacagaaaaccaaacactgcatgttttcactcataagttggagttgaacaatgagaacacttggacacagggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 3798 559 - 189199 atcattagagaaatgcaaatcaaaactaaaatgggatatcatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacgcttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacccagcaatctcattactgggtatatgcccagaggaatataaatcattctgttataaagatacatgcacacgtatgtttactgcagcactattcacagtagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatgcagcacggaatactatgcagccat-aaaaaaggaatgggatcacgtcctttgcaggtacatggatgaagctgaaagccatcatcctcaacaaactaacaggggaacagaaaaccaaacactgcatgttttcactcataagttggagttgaacaatgagaacacatggacacagggag i gorGor5.CYUI01000254v1 C 0 I 563 s nomLeu3.chr11 120915117 559 + 123690457 atcattagggaaatgcaaatcaaaaccacaatgggatatcatctcccgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacggttttacactcttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaggatacatgtacatgtatctttactgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatacagcacagaatactatgcagccat-aaaaaaggaatgggatcatgtcctttgcaggtacatggatgaagctgaaagccatcatcctcaacaaagtaacagaggaacagaaaaccaaacactgcatgttctcactcagaagttggagtggaacaatgagaacacatggacccagggag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202497160 556 + 204787373 atcattagagaaatgcaaatcaaaaccacaatggaataccatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaagctgtggagaaatatgaacgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctaaaaccagaaataccgtttgactcagccatcccattactggctatatacccaaaggaatataaatc-ttccattataaagatacatgcacatgtatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcctttgcagggacatggatgaagctggaaga---catcctcagcaaactaacacacgaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 104169 556 + 192460366 atcattagagaaatgcaaatcaaaaccacaatgggataccatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggagaaatatgaacgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctaaaaccagaaataccatttgactcagccatcccattactggctatatacccaaaggaatataaatc-ttccgttataaagatacatgcacatgtatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcctttgcagggacatggatgaagctggaaga---catcctcagcaaactaacacacgaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 589029 557 + 19675229 atcattagagaaatgcaaatcaaaaccacaatgggataccatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggagaaatacggacgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctagaaccagaaataccatttgactcagccattccattactgggtatatacccaaaggaatataaatcattccgttataaagatatgtgcacatgtatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaggaaaatgtggtacatatacagcatggaatacgatgcagccataaaaaaaggaatgggatcatgtcctttgcagggacatggatgaagctggaaga---catcctcagcaaactaacacacgaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 519405 559 + 16847902 atcattagagaaatgcaaatcaaaaccacaatggaatatcatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcaggtgctggcaaggctgtggagaaatatgaacgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctaaaaccagaaataccatttgactcagccatcccattactggctatatacccaaaggaatataaatc-ttccgttataaagatacatgcacatgtatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcttttgcagggacatggatgaagctggaagacatcatcctcagcaaactaacacacgaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 452728 560 - 91754291 atcattagagaaatgcaaatcaaaaccacaatgggataccatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggagaaatacgaacacttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctagaaccagaaataccatttgactcagccatcccattactgggtatatacccaaaggaatataaatcattccgttataaagatacatgcacatgtatgtttattgcagcattattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcttttgcagggacatggatgaagctggaagacatcatcctcagcaaactaacacacgaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 636333 559 - 1977891 atcattagagaaatgcaaatcaaaaccacaatggaatatcatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcaggtgctggcaaggctgtggagaaatatgaacgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctaaaaccagaaataccatttgactcagccatcccattactggctatatacccaaaggaatataaatc-ttccgttataaagatacatgcacatgtatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcttttgcagggacatggatgaagctggaagacatcatcctcagcaaactaacacacgaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 492152 558 + 7796314 atcattagagaaatgcaaatcaaaaccacaatgggataccatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctatggagaaatacg-atgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctagaaccagaaatatcatttgactcagtcatcccattactgggtacatacccaaaggaatataaatcattccgttataaagatacatgcacatgtatgtttactgcagcactattcacaatagtaaagacataaaaccaacccaaatgtccatcagtgacagactggataaag-aaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcctttgcagggacatggatgaagctggaagacatcatcctcagcaaactaacacaggaacagaaaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggag i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 461160 553 - 6778120 atcattagagaaatgcaaattaaaaccacaatgagataccatctcacttcagtcagaatggcagttattaaaaagtcaagaaacaacaggtgctggcaaggctatggagaagcaggag-acttttacactgctggtgggaatgtaaatcagttcaaccactgtggaagacagtgtggtgattcctcaaggatctagagcaagaaataccatttgacccagcaatcccattactggg--tacacccaaaggaatataaatcattctgttataaatatacatgcacacatatgtttattgcagcactattccatgcagtaaagacatggaaccaacccaaatgtccttcaatgatagactggataaagaaaatgtggtacatatacacaatggaatactatgcagccat--aaaaaggcatgggatcatgtcctttgcagggacatggatgaagctggaagccatcatcctcagcaaaccaacacaggaagagaaaaacaaatgc--cacgttctcactcataagtgggagttgaataatgagaacacattgacacagggag i cebCap1.NW_016107444v1 I 8388 C 0 s aotNan1.NW_018507959v1 21865 555 - 3732694 atcattagagaaatgcaaatcaaaaccacagtgagataccgtctcacatcagtcagaatggcagttattaaaaactcaagaaacaacagatgctggcaaggctgtggagaaataggaa-acttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggtgattcctcaaggatctagaacaagaaatataatttgacccagcaatcctattactgggcatatacccaaaggaatataaatcattctgttataaagatacatgcacacatatgtttattgcagcactattccatgcagtaaagacatggaaccaacccaaatgtccatcaatgacagactggataaagaaaatgtggtacatatataccatggaatactatgcagccat--aaaaaggaatgggatcgtgtccttttcagggacatggatgaagctggaagccatcatcctcagcaaaccaacacaggaacagaaaaccaaacac--cacgttctcactcctaagtggcagttgaataatgagaacacattgacacagggag i aotNan1.NW_018507959v1 I 17683 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1225034.000000 s hg38.chr3_KI270779v1_alt 170777 179 + 205312 gggaacaacacacactggcgcctgtcagggatgggacaaggggaggaagagcgtcaggataaatagctaatacatgcag--------------gtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcctgaaacttaaagt-aaaaaa- s panTro5.chr3 200157549 179 + 202621043 gggaacaacacacaccggcgcctgtcagggacgggacaaggggaggaaaagcgtcaggataaatagctaatacatgcag--------------gtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcccgaaacttaaagt-aaaaaa- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114247 179 + 190779 gggaacaacacacaccggcgcctgtcagggacgggacaaggggaggaaaagcgtcaggataaatagctaatacatgcag--------------gtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcccgaaacttaaagt-aaaaaa- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 4920 179 - 189199 gggaacaacacacaccggcgcctgtcagggacgggacaaggggaggaagagcgtcaggataaatagctaatacatgcag--------------gtgatgggttgatgggtgcagtagaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacacgtatcccgaaacgtaaagt-aaaaaa- i gorGor5.CYUI01000254v1 I 563 C 0 s nomLeu3.chr11 120915676 180 + 123690457 gggaacaacacacaccagcgcctgtcaggggcgggacaaggggaggaagagcgtcaggataaatagctaatgtatgcag--------------gtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcccgaaacttaaagtaaaaaaa- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202497716 176 + 204787373 gggaacagcacatacca-ggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaa--------------gtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 104725 176 + 192460366 gggaacagcacatacca-ggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaa--------------gtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 589586 177 + 19675229 gggaacagcacataccagggcctgcagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaa--------------gtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 519964 177 + 16847902 gggaacagcacataccagggcctatagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaa--------------gtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatttaacaaacgtgcatttgctgcacatgtatctcaaaacttaaagt-aaaa--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453288 177 - 91754291 gggaacagcacatcccagggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaa--------------gtgatgggttgataggtgtagcaaaccaccatggcacacatatacctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 636892 176 - 1977891 ggg-acagcacataccagggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaa--------------gtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatttaacaaacgtgcatttgctgcacatgtatctcaaaacttaaagt-aaaa--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 492710 177 + 7796314 gggaacagcacataccagggcctgtagggggccggacaaggggaggaagagtgtcaggataaatagctaatgcatgcag--------------gtgatgggttgataggtgtagcaaaccaccatgacacacatatacttgtgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa--- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 461713 192 - 6778120 gggaacatcacacactggggcctgctgggggcggggtaaggggagagagagcatcaggatacacaggtaatgcatgcggagcttaaagcctacatgatgggttgataggtgcagcaaaccaccatggcacacatatgcttatgtaacaaacctgcatgtgctgcacatgtgtcccagaattaaagtt-aaaa--a i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 22420 192 - 3732694 gggaacatcacacactggggcctgtcgggggcagggtaaggggagggagagcatcaggataaatagctaatgcatgcggagcttaaaacctacatgatgggttgatgggtgcagcaaaccaccatggcacacatatgcttatgtaacaaacctgcatgtgctgcacatgtatcccagaattaaagtt-aaaa--a i aotNan1.NW_018507959v1 C 0 I 24 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=95250.000000 s hg38.chr3_KI270779v1_alt 170956 24 + 205312 tgaaaagaaataaaAAG-AAAAAAT s panTro5.chr3 200157728 24 + 202621043 tgaaaagaaataaaAAG-AAAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114426 23 + 190779 tgaaaagaaataaaAAG--AAAAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5099 24 - 189199 tgaaaagaaataaaAAG-AAAAAAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120915856 25 + 123690457 tgaaaagaaaTAAAAAGAAAAAAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202497892 22 + 204787373 --aagtgaaataaaaAG-AAAAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 104901 22 + 192460366 --aagtgaaataaaaAG-AAAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 589763 22 + 19675229 --aagtgaaataaaaAG-AAAAAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 520141 22 + 16847902 --aagtgaaataaaaag-aaAAAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453465 22 - 91754291 --aagtgaaataaaaAG-AAAAAAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637068 22 - 1977891 --aagtgaaataaaaag-aaaaaaT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 492887 19 + 7796314 --aAATGAAAT---AAG-AAAAAAT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 461905 15 - 6778120 -aaaagaaaataaAAT--------- i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 22612 24 - 3732694 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=502097.000000 s hg38.chr3_KI270779v1_alt 170980 72 + 205312 GAAAAATTAATATATCACAACTGTACATATTTGGGGGATAAAAA---AATAATAAGAGATGGggccgggcatggt s panTro5.chr3 200157752 72 + 202621043 GAAAAATTAATATATCACAATTGTGCATATTTTGGGGATAAAAA---AATAATAAGAGATGGggccgggcatggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114449 72 + 190779 GAAAAATTAATATATCACAATTGTGCATATTTTGGGGATAAAAA---AATAATAGGAGATGGggccgggcatggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5123 72 - 189199 GAAAAATTAATATATCACAATTGTACATATTTGGGGGATAAAAA---AATAATAAGAGATGGggccgggcacggt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120915881 72 + 123690457 GAAAAATTAATATATCACAATTGTACATATTTGAGGGATAAAAA---AATAATAAGAGATGGgaccaggcatggt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202497914 71 + 204787373 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAA---AATAATAAGAGATAGggctgggcatggt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 104923 71 + 192460366 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAA---AATAATAAGAGATAGggctgggcatggt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 589785 72 + 19675229 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAATAAAAA---AATAATAAGAGATAGggctgggcatggt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 520163 71 + 16847902 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAA---AATAATAAGAGATAGgactgggcatggt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453487 72 - 91754291 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAATAAAAA---AATAATAAGAGATAGggctgggcatggt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637090 71 - 1977891 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAA---AATAATAAGAGATAGggctgggcatggt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 492906 71 + 7796314 GAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAA---AGTAATAAGAGATAGggctgggcatggt i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 461920 67 - 6778120 --------GGTAAATCACAATTGTGCATATTTGGGGGATAAAAAAATAATAATAAGAGATGGggctgggcacggt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 22636 72 - 3732694 AAAAAATTGGTAAATCACAATTGTGCATATTTAGGGGATAAAAA---AATAATAAGAGATGGGGCCGGGCATGGT i aotNan1.NW_018507959v1 I 24 I 145 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=268892.000000 s hg38.chr3_KI270779v1_alt 171052 43 + 205312 agc-cccacctgcaatcccagcactttgggaggctgagatgggt s panTro5.chr3 200157824 43 + 202621043 agc-cccacctgcaatcccagcactttgggaggccaagacgggt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114521 43 + 190779 agc-cccacctgcaatcccagcactttgggaggccgagacgggt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5195 43 - 189199 agc-cccaccggcaatcccagcactttgggaggccgagatgggt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120915953 43 + 123690457 agt-cccacctgcaatccgagcactttgggaggccgagatgagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202497985 44 + 204787373 agctcccacctgcaatcccagcactttgggaggccgaggtgagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 104994 44 + 192460366 agctcccacctgcaatcccagcactttgggaggccgaggcgagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 589857 44 + 19675229 agctcccacctgcaatcccagcactttgggaggccgaggcgagt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 520234 44 + 16847902 agctcccacctgcaatcccagcactttgggaggccgaggcgagt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453559 44 - 91754291 agcttccacctgcaatcccagcactttgggaggccgaggcgagt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637161 44 - 1977891 agctcccacctgcaatcccagcactttgggaggccgaggcgagt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 492977 44 + 7796314 agctcccacctgcaatcccagcactttgggaggccgaggcgagt i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 461987 44 - 6778120 aactcactactgcaatcccagcattttgggaggccgaggcagga i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e aotNan1.NW_018507959v1 22708 145 - 3732694 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=791495.000000 s hg38.chr3_KI270779v1_alt 171095 110 + 205312 ggatcacttgaggtcaggagtgcgagaccagcctgggcaatatggcaaaaccccgtctctactag-------aaaaaaaaatacagaaatagctgggcgtggtggtgggtgcctgta s panTro5.chr3 200157867 110 + 202621043 ggatcacttgaggtcaggagtgcgagaccagcctgggcaacatggcaaaaccccgtctctactag-------aaaaaaaaatacagaaatagctgggcgtggtggtgggtgcctgta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114564 109 + 190779 ggatcacttgaggtcaggagtgcgagaccagcctgggcaacatggcaaaaccccgtctctactag--------aaaaaaaatacagaaatagctgggcgtggtggtgggtgcctgta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5238 111 - 189199 ggatcacttgaggtcaggagtgcgagaccagcctgggcaatatggcaaaaccccgtctctactag------aaaaaaaaaatacagcaatagctgggcgtggtggtgggtgcctgta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120915996 112 + 123690457 ggatcacttgaggtcaggagtgcaagaccagcccaggcaacatggcaaaaccccatctctactag-----aaaaaaaaaaatacagaaatggctgggcatggtggtgggttcctgta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498029 111 + 204787373 ggatcacttgaggtcaggactgcgagaccagcctgggcaacatgacaaaaccccgtctctaccag------aaaaaaaaaatacaaaaatggctgggcatggtggcgggtgcctgta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105038 111 + 192460366 ggatcacttgaggtcaggagtgtgagaccagcctgggcaacatgacaaaaccccgtctctaccag------aaaaaaaaaatacagaaatggctgggcatggtggcgggtgcctgta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 589901 111 + 19675229 ggatcccttgaggtcaggagtgtgagaccagcctgggcaacatgataaaaccccgtctctaccag------aaaaaaaaaatacagaaatggctgggcatggtggcgggtgcctgta i macNem1.NW_012014355v1 C 0 I 968 s cerAty1.NW_012004056v1 520278 110 + 16847902 ggatcacttgaggtcaggagtgcgagaccagcctgggcaacatgacaaaaccccgtctctaccag-------aaaaaaaaatacaaaaatggctgggcatggtggcgggtgcctgta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453603 110 - 91754291 ggatcacttgaggtcaggagtgcgagaccagcctgggcagcatgacaaaaccctgtctctaccag-------aaaaaaaaatacagaaatggctgggcatgctggcgggtgcctgta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637205 110 - 1977891 ggatcacttgaggtcaggagtgcgagaccagcctgggcaacatgacaaaatcccgtctctaccag-------aaaaaaaaatacaaaaatggctgggcatggtggcgggtgcctgta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493021 111 + 7796314 ggattccttgaggtcaggagtgcgagaccagcctgggcaacatgacaaaaccccgtttctaccag------aaaaaaaaaatacagaaatggctgggcatggtggcgggtgcctgta i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462031 117 - 6778120 ggatcacttgaggtcaggagtttgagaccagcctgggcaacatggtgaagccctgtctctactaatattaaaacataataatacaaaaatagctgagtgaggcagcaggtgcctgta i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 22853 117 - 3732694 ggatcacctgaggtcaagagtttgagaccagcctgggcaacatggtgaagacctgtctctactaatattaaaaaaaattaatacaaaaatagctgagtgaggtggcaggtgcctgta i aotNan1.NW_018507959v1 I 145 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=453418.000000 s hg38.chr3_KI270779v1_alt 171205 69 + 205312 atcccagttactcaaaaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagca s panTro5.chr3 200157977 69 + 202621043 atcccagttactcaaaaggctgaggcaggagatttgcttgaacccaggaggtggaggttgcagtgagca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114673 69 + 190779 atcccagttactcaaaaggctgaggcaggagatttgcttgaacccaggaggtggaggttgcagtgagca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5349 69 - 189199 atcccagttactcaaaaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916108 69 + 123690457 atcccagctactcaaaaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498140 69 + 204787373 atcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105149 69 + 192460366 atcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagca i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520388 69 + 16847902 atcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453713 69 - 91754291 atcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637315 69 - 1977891 atcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493132 69 + 7796314 atcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagca i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462148 69 - 6778120 atcccagctactccaaaggctgaggcaggagcatcacttgaacccaggaggtggaggatgcagtgagca i cebCap1.NW_016107444v1 C 0 I 19 s aotNan1.NW_018507959v1 22970 69 - 3732694 atcccagctactccaaagactgaggcagaagcatcacttgaacccaggaggtggaggatgtagcgagca i aotNan1.NW_018507959v1 C 0 I 1 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=81674.000000 s hg38.chr3_KI270779v1_alt 171274 17 + 205312 gacatcatgccacttca s panTro5.chr3 200158046 17 + 202621043 gacatcatgccactaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114742 17 + 190779 gacatcatgccactaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5418 17 - 189199 gacatcatgccacttca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916177 17 + 123690457 gagatcatgccactgca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498209 17 + 204787373 gagatcacgccactgca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105218 17 + 192460366 gagatcacgccactgca i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520457 17 + 16847902 gagatcatgccattgca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453782 17 - 91754291 gagatcacgccactgca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637384 17 - 1977891 gagatcacgccattgca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493201 17 + 7796314 gagatcacaccactgca i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 23040 17 - 3732694 gagatggcgccactgca i aotNan1.NW_018507959v1 I 1 C 0 e otoGar3.GL873829 455154 3663 - 608964 I e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e cebCap1.NW_016107444v1 462217 19 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=13248.000000 s hg38.chr3_KI270779v1_alt 171291 3 + 205312 ctg s panTro5.chr3 200158063 3 + 202621043 ctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114759 3 + 190779 ctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5435 3 - 189199 ctg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916194 3 + 123690457 ctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498226 3 + 204787373 ctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105235 3 + 192460366 ctc i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520474 3 + 16847902 ctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453799 3 - 91754291 ctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637401 3 - 1977891 ctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493218 3 + 7796314 ctc i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 23057 3 - 3732694 ctc i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458817 3 - 608964 ctg i otoGar3.GL873829 I 3663 C 0 e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e cebCap1.NW_016107444v1 462217 19 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=183068.000000 s hg38.chr3_KI270779v1_alt 171294 57 + 205312 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------ataaataaataaaa----taa s panTro5.chr3 200158066 41 + 202621043 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a-------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114762 45 + 190779 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a------------a----aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5438 49 - 189199 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a--------aaaaa----aaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916197 51 + 123690457 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a------aaaaaaa----gag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498229 48 + 204787373 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a---------aaaa----gag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105238 48 + 192460366 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a---------aaaa----gag i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520477 42 + 16847902 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a---------a---------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453802 47 - 91754291 cagcctgggtgacagagcaagagtctgtctcaaaaaaaa---a-------------------------------------a---------aaaa-----aa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637404 48 - 1977891 cagcctgggcgacagagcaagattctgtctcaaaaaaaa---a-------------------------------------a---------aaaa----gag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493221 40 + 7796314 cagcctgggcgacagagcaagattctgtctcaaaaaaa-------------------------------------------------------------ag i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462236 91 - 6778120 cagcctgggcaacagagagaga--ctgcctcaaagaaaa---aaaaaagaaaaagagaaaagagagggagggagagagaga-gagagagaggga----ggg i cebCap1.NW_016107444v1 I 19 C 0 s aotNan1.NW_018507959v1 23060 54 - 3732694 cagcctgggcgacagagcgaga--ctgcctcaaaaaaaa---a-------------------------------------a-gagagagagaga----gag i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458820 57 - 608964 cccactgagccacag-gcggcacccAGCTTGGAGAGAAACTTA-------------------------------------A------GGAAAAATTCTGCA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e canFam3.chr33 29089768 3246 + 31377067 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=11947.000000 s hg38.chr3_KI270779v1_alt 171351 3 + 205312 aaa s panTro5.chr3 200158107 2 + 202621043 -aa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114807 3 + 190779 aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5487 3 - 189199 aaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916248 3 + 123690457 aga i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498277 3 + 204787373 aga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105286 3 + 192460366 aga i macFas5.chr2 C 0 C 0 s chlSab2.chr15 453849 3 - 91754291 aaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637452 3 - 1977891 aga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493261 3 + 7796314 aga i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462327 3 - 6778120 gga i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 23114 3 - 3732694 aga i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458877 3 - 608964 ATA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093014 1 + 31377067 --A i canFam3.chr33 I 3246 C 0 e mm10.chr16 65452798 7514 - 98207768 I e dasNov3.JH569502 3916576 13007 + 6579706 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e cerAty1.NW_012004056v1 520519 0 + 16847902 C a score=30846.000000 s hg38.chr3_KI270779v1_alt 171354 6 + 205312 aGGAGA-- s panTro5.chr3 200158109 6 + 202621043 aggaga-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114810 6 + 190779 aggaga-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5490 6 - 189199 aGGAGA-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916251 6 + 123690457 gagaga-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498280 6 + 204787373 gagaga-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105289 6 + 192460366 gagaga-- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520519 5 + 16847902 -agaga-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453852 6 - 91754291 gagaga-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637455 6 - 1977891 gaaaGA-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493264 6 + 7796314 gagaga-- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462330 6 - 6778120 gggaga-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 23117 6 - 3732694 gagaga-- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458880 6 - 608964 AAGAAT-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093015 6 + 31377067 ACAAGA-- i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3929583 6 + 6579706 --AAGAAT i dasNov3.JH569502 I 13007 C 0 e mm10.chr16 65452798 7514 - 98207768 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=563931.000000 s hg38.chr3_KI270779v1_alt 171360 64 + 205312 GAGAGATGGGGGTGCAGGATTCCCACAG----AGGAAGGCCCCTGATAAGCACTGCTTCA-AATCGCCT s panTro5.chr3 200158115 64 + 202621043 gagagaTGGGAGTGCAGTATTCCCACAG----AGGAAGGCCCCTGATAAGCACTGCTTCA-AATCGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114816 64 + 190779 gagagaTGGGAGTGCAGTATTCCCACAG----AGGAAGGCCCCTGATAAGCACTGCTTCA-AATCGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5496 64 - 189199 GAGAGATGGGGGTGCAGGATTCCCACAG----AGGAAGGCCCCTGATAAGCACTGCTTCA-AATCGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916257 63 + 123690457 GAGAGATAGGGGTGCCGAATTCCCACAG----AGGAAGGCCCCTGATAGGCACTGCTTC--AATCGTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498286 64 + 204787373 gagaGATGGGGGTGCAGGATCCCCACGG----AGGAAGGCCCCTGAGAAGCACTGCTTCA-AATCGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105295 64 + 192460366 gagagaTGGGGGTGCAGGATCCCCACGG----AGGAAGGCCCCTGAGAAGCACTGCTTCA-AATCGCCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520524 64 + 16847902 gagagaTGGGGGTGCAGGATCCCCACAG----AGGAAGGCCCCTGAGAAGCACTGCTTCA-AATTGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453858 64 - 91754291 gagaGATGGGGGTGCAGGATCCCCACAG----AGGAAGGCACCTGAAAAGCACTGCTTCA-AATCGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637461 64 - 1977891 GAGAGATGGGGGTGCAGGATCCCCACAG----AGGAAGGCCCCTGAGAAGCACTGCTTCA-AATTGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493270 68 + 7796314 gagagaTGGGGGTGCAGGATTGCCACAGAGGAAGGAAGGCCCCTGAAAAGCACTGCTTCA-AATCACCT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462336 64 - 6778120 gagagaggagggTGCAGGATTTCCACAG----AGGAAGGGGCCTGATAAGCACTGCTTCA-AATTGTCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 23123 64 - 3732694 gagagaCGAGGGTGCAGGATTTCCACAG----AGGAAGGTACCTGATAAGCACTGCTTCA-AATTGTCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458886 64 - 608964 AAGAGGTGCAAGTGCCAGATTCTCATAG----AGGAAGGTACCAGATCTGGGCTGCTTCA-AAGTGTTA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65460312 64 - 98207768 GAGAGGTGGCAGTGCAGGCTTCCCACAG----A-GAAGCCAGCTGCTCAGGGTGGCTTCAGAACCACCT i mm10.chr16 I 7514 I 1200 s canFam3.chr33 29093023 63 + 31377067 AAAGGGTGGAGGTGCAGGATTCCTACAG----AGTAAGGCACCTGATCAGGACTGCTGCA-AATTGTT- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3929589 64 + 6579706 AAGGGATGGGGGTGCAAGAATTCCACAG----AGAGAGGCACCTGATAAGGGCTGCCTCA-AATTGTTT i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=171376.000000 s hg38.chr3_KI270779v1_alt 171424 28 + 205312 AG-AAAAAGCACAGTTGCAGGAATATAGC-- s panTro5.chr3 200158179 28 + 202621043 AG-AAAAAGCACAGTTGCAGGAATATAGC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114880 28 + 190779 AG-AAAAAGCACAGTTGCAGGAATATAGC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5560 28 - 189199 AG-AAAAAGCACAGCTGCAGGAATATAGC-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916320 28 + 123690457 AG-AAAAAGCACAGTCGCAGGAATATAGC-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498350 28 + 204787373 AG-AAAAAGCACAGTCCCAGGAGTACAGC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105359 28 + 192460366 AG-AAAAAGCACAGTCCCAGGAGTACAGC-- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520588 27 + 16847902 AG--AAAAGCACAGTCCCAGGAGTACAGC-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453922 28 - 91754291 AG-AAAAAGCACAGTCCCAGGAGTATAGC-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637525 28 - 1977891 AG-AAAAAGCACAGTCCCAGGAGTACAGC-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493338 28 + 7796314 AG-AAAAAGCACAGTCCCAGGAATATAGC-- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462400 27 - 6778120 AG--AAAAAAACAGTCCCCAGAATATGGC-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 23187 28 - 3732694 AG-AAAAAAAACAGTCCCCAGAATATAGC-- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458950 29 - 608964 AAAAAAAAAAAAAATCCCAGGAATAAAAT-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093086 28 + 31377067 AC-AAAAGAAAAGATTTCAGAAATATAAC-- i canFam3.chr33 C 0 I 288 s dasNov3.JH569502 3929653 24 + 6579706 ------AAACA-AATCCCAAGAATACAATGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=144599.000000 s hg38.chr3_KI270779v1_alt 171452 25 + 205312 CAAT--GGTCTTCTCCAGCTCCCGCCT s panTro5.chr3 200158207 25 + 202621043 CAAT--GGTCTTCTCCAGCTCCCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114908 25 + 190779 CAAT--GGTCTTCTCCAGCTCCCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5588 25 - 189199 CAAT--GGTCTTCTCCAGCTCCCACCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916348 25 + 123690457 CAAT--GGTCTTCTCCAGCTCCCGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498378 25 + 204787373 CCAT--GGTCTTCTCCAGCTCCCGGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105387 25 + 192460366 CCAT--GGTCTTCTCCAGCTCCCGGCT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520615 25 + 16847902 CCAT--GGTCTTCTCCAGCTCCCGGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453950 25 - 91754291 CAAT--GGTCTTCTCCAGCTCCCGGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637553 25 - 1977891 CCAT--GGTCTTCTCCAGCTCCCGGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493366 25 + 7796314 CCAT--GGTCTTCTCCAGCTCCCGGCT i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462427 25 - 6778120 CAAT--GACCTCCTCCAACTCCCAGCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 23215 22 - 3732694 CAAC--GA---TCTCCAACTCCCAGCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 458979 27 - 608964 TGAGTAAGACTTCTCTGACTCATGGCT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3929677 25 + 6579706 GAAA--GCCTCTTTTTAAATCACCACA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093114 288 + 31377067 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=946570.000000 s hg38.chr3_KI270779v1_alt 171477 132 + 205312 GTCTTCCTTGTGAGGAGGAAGGTGAGGTTAGACTAGAATGGTGAATTAACTGTGTTAAACTCCATGGGAAGAGGCAAACAGTACCCCTGCTATAAGCCGGGTTAACT-CTCTCAACTTGAATTATAGCATTAT-- s panTro5.chr3 200158232 132 + 202621043 GTCTTCCTTGTGAGGAGGAAAGTGAGGTTAGACTAGAATGGTGAATTAACTGTGTTAAACTCCATGGGAAGAGGGAAACAGTACCCCTGCTATAAGCCGGGTTAACT-CTCTCAACTTGAATTATAGCATTAT-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 114933 132 + 190779 GTCTTCCTTGTGAGGAGGAAAGTGAGGTTAGACTAGAATGGTGAATTAACTGTGTTAAACTCCATGGGAAGAGGGAAACAGTACCCCTGCTATAAGCCGGGTTAACT-CTCTCAACTTGAATTATAGCATTAT-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5613 132 - 189199 GTCTTCCTTGTGAGGAGGAAGGTGAGGTTAGACTAGAATGGTGAATTAACTGTGTTAAACTCCATGGGAAGAGGGAAACAGTACCCCTGCTATAAGCTGGGTTAACT-CTCTCAACTTGAATTATAGCATTAT-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916373 132 + 123690457 ATCTTCCTTGTGAGGGGGAAGGTGAGGTTAGACTAGAATGGTGAATGAACTGTGTTAAACTCCATGGGAAAAGGGAATCAGTACCTCTGCTATAAGCTGGGTTAACT-CTCTCAACTTGAATTATAGCATTAT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498403 131 + 204787373 GTCTTCGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGGAAACGGTACC-CTGCTGTAAGCCGGGTTAACT-CTCTCACCTTGAATTACAGCGTTAT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105412 131 + 192460366 GTCTTCGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGGAAACGGTACC-CTGCTGTAAGCCGGGTTAACT-CTCTCACCTTGAATTACAGCGTTAT-- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520640 131 + 16847902 GTCTTTGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGACAACGGTACC-CTGCTGTAAGCCGGGTTAACT-CTCTCACCTTGAATTACAGCGTTAT-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 453975 131 - 91754291 GTCTTCCTTGTGGGGAGGAAGGTAAGGTTGGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGCAAGACGGAAACAGTACC-CTGCTGTAAGCCGGGTTAATT-CTCTTACCTTGAATTACAGCATTAT-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637578 131 - 1977891 GTCTTTGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGGCAACGGTACC-CTGCTGTAAGCCGGGTTAACT-CTCTCACCTTGAATTACAGCGTTAT-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493391 131 + 7796314 GTCTTCCTTGTGAGGAGGAAGGTAAGGTTAGACTAGAATGGTGAGTGAACTGTTTTAAACTCCATGGGAAGAGGGAAACGGTACC-CTGCTGTAAGCCGGGTTAACT-CTCTCACCTTGAATTACAGCGTTAT-- i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 462452 132 - 6778120 GTCTTCCTTACAAGGAGGAAGATCAGGTTAAACTAGAACGGCGAGTGAACTGTTTTAAACTCCATGGGAAGAGGGAAGCAAAACCTCTGCTATAAGCCAGGTTGACC-CTCCCACCTTGAATTATAGCGTTAT-- i cebCap1.NW_016107444v1 C 0 I 1742 s aotNan1.NW_018507959v1 23237 132 - 3732694 GTCTTCCTTATAAGGAGGAGGATGAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTGCATGGGAAGAGGGAAACAATACCCCTGCTATAAGGCAGGTTGACC-CTCTCATGTTGAATTATAGCATTAT-- i aotNan1.NW_018507959v1 C 0 I 1281 s otoGar3.GL873829 459006 124 - 608964 GTCTTCCCTGTGAGGAAGA-GGTGAGGTTAGACCAGAATGGTGAATGGGCTGTTTTAATCTCCGAAGGGCAAGGGAGACAATGCCCTTGCTGT-------GCTAACT-CTTTCAATTTGAATTATAGCATTTT-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093402 104 + 31377067 GTTTTCCTTATGAAGAGGAGGACAAGGTTAGACTAGAATGGTTACCAGACTGTTTTAAACCCCTC----AGTGGGAGACAAT------------------GTTAGCT-CTTGCA----GAACTAGAACatt---- i canFam3.chr33 I 288 C 0 s dasNov3.JH569502 3929702 91 + 6579706 GTCTTCCTCAT---GAAGAAAGCAAGGTTAGACTAGAATG-----TGAAC------------------------------------ATAGTACAAACTGTGTTAACTCCTTTCCACCTAAATTATAGCATTCACT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=779309.000000 s hg38.chr3_KI270779v1_alt 171609 150 + 205312 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTTTTCTTTTTCGTTGTTAACATCTGTGCCAATCTGGTAAAAAACCCAAGGGGTAAATGCATATACTCTTGCCCTGGTCACAGACTACCAAGAAGCTAATATTATTGACCATAACCACTTTTT s panTro5.chr3 200158364 150 + 202621043 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTTTTCTTTTTCGTTGTTAACATCTGTCCCAATCTAGTAAAAAACCCAGGGGGTAAATGCATATACTCTTGCCCTGGTCACAGACTACCATGAAGCTAATATTATTGACCATAACCACTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115065 150 + 190779 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTTTTCTTTTTCGTTGTTAACATCTGTCCCAATCTAGTAAAAAACCCAGGGGGTAAATGCATATACTCTTGCCCTGGTCACAGACTACCATGAAGCTAATATTATTGACCATAACCACTTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5745 145 - 189199 CTTTCTTAAAAATA-----AATTAAATTTCTC-CTTTTCTTTTTCGTTATTAACATCTGTCCCA-----GTAAAAAACCCAAGGGGTAAATGCATATACTCTTGCCCTGGTCACAGACTACCATGAAGCTAATATTATTGACCATAACCACTTTTT i gorGor5.CYUI01000254v1 C 0 I 1 s nomLeu3.chr11 120916505 149 + 123690457 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTTTTCTTTTTCGTTATTAACATTTGTCCCAATCTAGTAAAAAACCCAA-GGGTAAATGCATATACTCTTGCCCTGGTCACAGACTACCATGAAGCTAATATTATTGATCATAACCACTTTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498534 147 + 204787373 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTGTTCTGTTTCG---TTAACATTTATCCCAATCTAATAAAAAACCCAAGCGGTAAATGCATATACTCTCGTCCTGGTCACAGACTACCATGAAGCTAATATCATCGGTCATAACTACTTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105543 147 + 192460366 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTGTTCTGTTTCG---TTAACATTTATCCCAATCTAATAAAAAACCCAAGCGGTAAATGCATATACTCTCGTCCTGGTCACAGACTACCATGAAGCTAATATCATTGGTCATAACTACTTTTT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520771 147 + 16847902 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTGTTCTGTTTCA---TTAACATTTATCCCAATCTAATAAAAAACCCAAGTGGTAAATGCATATGCTCTCGTCCTGGTCACAGACTACCATGAGGCTAATATCATTGGTCATAACTACTTTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454106 147 - 91754291 CTTTCTTAAAAATA-----AATTAAATTTCTA-CTGTTCTGTTTCG---TTAACATTTATCCCAATCTAATAAAAAACCCAAGCGGTAAATGCATATACTCTTGTCCTGGTCACAGACTACCATGAGGCTAATATCATTGGTCATAACTACTTTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637709 147 - 1977891 CTTTCTTAAAAACA-----AATTAAATTTCTA-CTGTTCTGTTTCA---TTAACATTTATCCCAATCTAATAAAAAACCCAAGCGGTAAATGCATATGCTCTCGTCCTGGTCACAGACTACCATGAGGCTAATATCATTGGTCATAACTACTTTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493522 147 + 7796314 CTTTCTTAAAAATA-----CATTAAATTTCTA-CTGTTCTGTTTCG---TTAACATTTGTCCCAATCTAATAAAAAACCCAAGCGGTAAATGCATATACTCTCGTCCTGGTCACAGACTACCATGAGGCTAATATCATTGGTCATAACTACTTTTG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459130 133 - 608964 ------TTAAAGTA-----AATTAAATTTCTA-CTTATTTTTATCT---TAAACATTCATCCCAATCTAGC-AGAAACCTAAGGAGTACGTGCATATACTCCAGCCCTGGTTGCTTCCTAACATGTTGCTAATTTAATTGATAGTAACT------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093506 141 + 31377067 -----ttaaaaataataataattaaatGTCTA-CTTCCCCCCCTCATCTTAAACATTTGTTCTAGC------AGAAACCTAAGGAGTAAGTGTACATATTCTATCTCTCATCATGTCATACAAT---GTTAATTTAATTGATCATGTCTATTTTTT i canFam3.chr33 C 0 I 8 s dasNov3.JH569502 3929793 147 + 6579706 ATATTTTAATAATATAGCATATTAAGTTTCTATCTTTTTTTACTCATTTTAATCATCTTCCGTCATCTAGC-AAAAACCTAAGGTGTGAGTGTGCCCACTCTAGTCCTGGTCAAATCATAATGTGATGATAATTTAATTGATTGCGCC-------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=73953.000000 s hg38.chr3_KI270779v1_alt 171759 19 + 205312 AAAAAAAAATTATTTCCCA s panTro5.chr3 200158514 19 + 202621043 TAAAAAAAATTATTTCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115215 17 + 190779 --AAAAAAATTATTTCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5891 19 - 189199 AAAAAAAAATTATTTCCCA i gorGor5.CYUI01000254v1 I 1 C 0 s nomLeu3.chr11 120916654 19 + 123690457 AAAAGAAAATTATTTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498681 19 + 204787373 TTTAAAACATTATTTCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105690 19 + 192460366 TTTAAAACATTATTTCCCA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520918 19 + 16847902 TTAAAAACGTTATTTCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454253 19 - 91754291 TAAAAAACATTATTTCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637856 19 - 1977891 TTAAAAACATTATTTCCCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493669 19 + 7796314 TTAAAAACATTATTTCCCA i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459263 10 - 608964 ---------TTATTTTCCA i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3929940 8 + 6579706 -------AATTGTTT---- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093647 8 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=198048.000000 s hg38.chr3_KI270779v1_alt 171778 39 + 205312 GGCAGAggccaggcatggtggctcatgtctgtaatccca s panTro5.chr3 200158533 39 + 202621043 GGCAGAggccaggcatggtggctcatgtctgtaatccca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115232 39 + 190779 GGCAGAggccaggcatggtggctcatgtctgtaatccca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5910 39 - 189199 GGCAGAggccaggcatggtggctcatgtctgtaatccca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916673 39 + 123690457 GGCAGAggccaggcatggtggctcatgtctgtaatccca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498700 39 + 204787373 GGCAGAggccaggcatggtagctcatgtctgtaatccca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105709 39 + 192460366 GGCAGAggccaggcatggtggctcatgtctgtaatccca i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520937 39 + 16847902 GGCAGAggccaggcatggtggctcatgtctgtaatccca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454272 39 - 91754291 GGCAGAggccaggaatggtggctcatgtctgtaattcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637875 39 - 1977891 GGCAGAggccaggcatggtggctcatgtctgtaatccca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493688 39 + 7796314 GGCAGAggccaggcatggtggctcatgtctgtaatccca i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3929948 12 + 6579706 ---------------------------TCTTCAATTCAA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 459273 0 - 608964 C e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093647 8 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=535017.000000 s hg38.chr3_KI270779v1_alt 171817 136 + 205312 gcattttgggaggccaaggtgggaggatcactcgaggccaggagtttgagaccagcctgggcaagatagcgagaccctgtgtcttaaaaaa---taaaaatAAtaataataataataaaaatagatat----taaataaagaa s panTro5.chr3 200158572 130 + 202621043 gcattttgggaggccaaggtgggaggatcacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaaaaa---taaaaatAATAATAATAA------AAATAGATAT----TAAATAAAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115271 130 + 190779 gcattttgggaggccaaggtgggaggatcacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaaaaa---taaaaatAATAATAATAA------AAATAGATAT----TAAATAAAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 5949 140 - 189199 gcattttgggaggccaaggtgggaggatcacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctctgtcttaaaaaa---taaaaataaaaataataataataataatagatattaaataaataaagaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916712 129 + 123690457 gcattttgggaggccaaggtgggaggatcacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaaaaa---taaaaataaAA-----AA------AAATAAATATTAAATAAATAAAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498739 132 + 204787373 gcactttgggagtccaaggtgggaggaccacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtctTAAAtagtaatagtaataataataataa-----------tatattaaataaagaaagaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105748 132 + 192460366 gcactttgggagtccaaggtgggaggaccacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtctTAAAtagtaatagtaataataataataa-----------tatattaaataaagaaagaa i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 520976 129 + 16847902 gcactttgggagtccaaggtgggaggaccacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtctTAAAtag---tagtagtaataataataa-----------tatactaaataaataaagaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454311 129 - 91754291 gcactttgggagtccaaggtgggaggaccacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaatag---taataataaTAATAATAA-----------TATACTAAATAAAGAAAGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 637914 129 - 1977891 gcactttgggagtccaaggtgggaggaccacttgaggccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtctTAAAtag---tagtagtaataataataa-----------tatactaaataaagaaagaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493727 125 + 7796314 gcactttgggaggccaagatggatggatcacctgaggccaggagtttgaggccagcctggggaacatagtgagaccctgtgtctTAAAtag---taataataataataataa-----------tatat----taaagaaagaa i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 459273 0 - 608964 C e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3929960 0 + 6579706 C e canFam3.chr33 29093647 8 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=14322.000000 s hg38.chr3_KI270779v1_alt 171953 3 + 205312 aaa s panTro5.chr3 200158702 3 + 202621043 AAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115401 3 + 190779 AAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6089 3 - 189199 aaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916841 3 + 123690457 AAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498871 3 + 204787373 aaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105880 3 + 192460366 aaa i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 521105 3 + 16847902 aaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454440 3 - 91754291 AAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638043 3 - 1977891 aaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493852 3 + 7796314 aaa i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459273 3 - 608964 ATG i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3929960 0 + 6579706 C e canFam3.chr33 29093647 8 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=21294.000000 s hg38.chr3_KI270779v1_alt 171956 3 + 205312 taT s panTro5.chr3 200158705 3 + 202621043 TAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115404 3 + 190779 TAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6092 3 - 189199 taT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916844 3 + 123690457 TAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498874 3 + 204787373 taT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105883 3 + 192460366 taT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 521108 3 + 16847902 taT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454443 3 - 91754291 TAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638046 3 - 1977891 taT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493855 3 + 7796314 taT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459276 3 - 608964 TAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093655 3 + 31377067 TAT i canFam3.chr33 I 8 C 0 e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3929960 0 + 6579706 C e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=460068.000000 s hg38.chr3_KI270779v1_alt 171959 81 + 205312 TTCCCAGGCAGAATGTTTAAATATTGGCTTTTTTTGTTTAAAATATTT-CACAGCACCTG--CACTAGCCACATAC----------------------------CATCTTCG s panTro5.chr3 200158708 81 + 202621043 TTCCCAGGCAGAATGTTTAAATATTGGCTTTTTTTGTTTAAAATATTT-CACAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115407 80 + 190779 TTCCCAGGCAGAATGTTTAAATATTGGC-TTTTTTGTTTAAAATATTT-CACAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6095 81 - 189199 TTCCCAGGCAGAATGTTTAAGTATTGGCTTTTTTTGTTTAAAATATCT-CACAGCACCTA--CACTAGCCACGTAC----------------------------CATCTTCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916847 81 + 123690457 TTCCCAGGCAGAATGTTTAAATATTGGCTTTTTTTGTTTACAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498877 81 + 204787373 TTCCCAGGCAGAATGTTTAAATATTGGATTTTTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105886 81 + 192460366 TTCCCAGGCAGAATGTTTAAATATTGGATTTTTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 521111 79 + 16847902 TTCCCAGGCAGAATGTTTAAATATTGGA--ATTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454446 81 - 91754291 TTCCCAGGCAGAATGTTTAAATATTGGATTTTTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638049 79 - 1977891 TTCCCAGGCAGAATGTTTAAATATTGGA--ATTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493858 80 + 7796314 TTCCCAGGCAGAATGTTTAAATATTGGAATTTTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCATATAC----------------------------CA-CTTCT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459279 81 - 608964 TTCCCAGGCCTGATGTTTAAATGTCAGCTTATTTTGTTCAAAATATTT-TACAGCACCTA--CATTACCTACATGC----------------------------CATCCTCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093658 112 + 31377067 CTGGTAGGCAGGATATTTAAGTATCAAATTGTTCGGTTTAAAATATTTGTACTCCCACTAGTCACTAGTCACAGACAAAGCCTCAGTCAACCAGTAGACCCGATCATCCCCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3929960 108 + 6579706 TTCCCAGGCAGAATGTTTAAATACCAACCCGTTTTGTTCTCAGTAAAG-GACTG-ATGCA--CACCAGCTACAGCCAAAGCCGGAGTCAGCTGGTAGAGCTAACCATCCTCC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 590012 968 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=738987.000000 s hg38.chr3_KI270779v1_alt 172040 122 + 205312 TGAATATTACCTT---AG---CCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTT-GCCTT--------------------------------TTTTTTTCTCTTA--GAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT s panTro5.chr3 200158789 122 + 202621043 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAAGAAGAAACTAAGAAAACTT-GCCTT--------------------------------CTTTTTTCTCTTA--GAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115487 122 + 190779 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTT-GCCTT--------------------------------CTTTTTTCTCTTA--GAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6176 121 - 189199 TGAATATTACCTT---AG---CCTCTGAGTCCCTGAA--CCAAGAAGAAACCAAGAAAACTT-GCCTT---------------------------------TTTTTTCTCTTA--GAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120916928 124 + 123690457 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CTAAGAAGAAACCAAGAAAACTT-GCCTTTT------------------------------CTTTTTTCTTTTA--GAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202498958 119 + 204787373 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTT-GC-----------------------------------TTTTTTTTTCTTA--GAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 105967 116 + 192460366 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTT-GC-----------------------------------TTTTTTTTTCTTA--GAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 590980 120 + 19675229 TGAATATTACCTT---AG---TCTCTGAAGTTCTGAA--CCAAAGAGAAAACCAGAAAACTTAGC-----------------------------------TTTTTTTTTCTTATGAAACCTTACTCTTT--GGTTTTCATTAAGTTCCTAGCTGTTCTCAAACTT i macNem1.NW_012014355v1 I 968 I 872 s cerAty1.NW_012004056v1 521190 119 + 16847902 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAGGAAGAAACCAAGAAAACTT-GC-----------------------------------TTTTTTTTTCTTA--GAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454527 119 - 91754291 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACCT-GC-----------------------------------TTTTTTTTTCTTA--GAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638128 119 - 1977891 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAGGAAGAAACCAAGAAAACTT-GC-----------------------------------TTTTTTTTTCTTA--GAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 493938 117 + 7796314 TGAATATTACCTT---AG---TCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTT-GC--T--------------------------------TTTTTTTTTCTTA--GAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTACTCAAA--- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459360 121 - 608964 TGAACTTTATCTT---AAAGTTCTCTGAGTC-CTAAA--TCAAGGAGAATTCGTGAAAACAT-GA--G--------------------------------TCATTTTTACTTA--GCAGCTTACTCTTttttgtttcgttttgttttgt-tttgttttTGagagt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093770 159 + 31377067 TGAATTTTACCTTTAGGG---ACTTTGAGTCTTTTAAATCAAAGAAGAAACCCCAAAACATT-GAGTCTTTTTGTGTGTGTGTTTttttgttttgttttgttttgttttTTTA--GGAACTTACTCTTTTTGGTTTTCATTAGCTCCCTAGCTGTATTCAAACAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3930068 94 + 6579706 TGAACATTCTTTC---AAA--GGTCTGCGTCTTCTAA--------------------------AC--C--------------------------------TATCTGTTTCTTA--GGAATCTGTTCTTTCTGGTTTTCATTAGCCCCCTagctgttctcaa---- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=27172.000000 s hg38.chr3_KI270779v1_alt 172162 10 + 205312 CTTTCTTTTT s panTro5.chr3 200158911 10 + 202621043 CTTTCTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115609 10 + 190779 CTTTCTTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6297 10 - 189199 CTTTCTTTTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917052 10 + 123690457 CTTTCTTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499077 10 + 204787373 TTTTCTTTTT i rheMac8.chr2 C 0 I 262 s macFas5.chr2 106083 6 + 192460366 ----CTTTTT i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 521309 10 + 16847902 TTTTCTTTTT i cerAty1.NW_012004056v1 C 0 I 426 s chlSab2.chr15 454646 3 - 91754291 TTT------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638247 10 - 1977891 TTTTCTTTTT i manLeu1.NW_012102020v1 C 0 I 276 s colAng1.NW_012118932v1 494055 6 + 7796314 ----CTTTTT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459481 10 - 608964 ttcactttgt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29093929 9 + 31377067 -TTTTTTTTT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3930162 2 + 6579706 ------tt-- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=-168.000000 s hg38.chr3_KI270779v1_alt 172172 5 + 205312 T--CTTT- s panTro5.chr3 200158921 6 + 202621043 TT-CTTT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115619 5 + 190779 T--CTTT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6307 5 - 189199 T--CTTT- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917062 5 + 123690457 C--CTTT- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106089 5 + 192460366 T--CTTT- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 454649 5 - 91754291 T--CTTT- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 494061 5 + 7796314 T--CTTT- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459491 6 - 608964 -tgccct- i otoGar3.GL873829 C 0 I 58 s canFam3.chr33 29093939 5 + 31377067 --ACCTC- i canFam3.chr33 I 1 I 479 s dasNov3.JH569502 3930164 5 + 6579706 ---ttttt i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 638257 276 - 1977891 I e cerAty1.NW_012004056v1 521319 426 + 16847902 I e rheMac8.chr2 202499087 262 + 204787373 I a score=18340.000000 s hg38.chr3_KI270779v1_alt 172177 6 + 205312 TTAAAC s panTro5.chr3 200158927 6 + 202621043 TTAAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115624 6 + 190779 TTAAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6312 6 - 189199 TTAAAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917067 6 + 123690457 TTAAAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106094 6 + 192460366 TTAAAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 454654 6 - 91754291 TTAAAC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 494066 6 + 7796314 TTAAAC i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3930169 6 + 6579706 ttaacc i dasNov3.JH569502 C 0 I 83 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 638257 276 - 1977891 I e cerAty1.NW_012004056v1 521319 426 + 16847902 I e rheMac8.chr2 202499087 262 + 204787373 I a score=25197.000000 s hg38.chr3_KI270779v1_alt 172183 17 + 205312 ATATATATATagagaga s panTro5.chr3 200158933 17 + 202621043 ATATATATATagagaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115630 17 + 190779 ATATATATATagagaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6318 16 - 189199 ATATATATATA-agaga i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917073 17 + 123690457 atatatatatatatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106100 17 + 192460366 atatatagatagataga i macFas5.chr2 C 0 I 527 s chlSab2.chr15 454660 17 - 91754291 atatatagatagatata i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 494072 17 + 7796314 ATATACATATATATTTT i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 638257 276 - 1977891 I e cerAty1.NW_012004056v1 521319 426 + 16847902 I e rheMac8.chr2 202499087 262 + 204787373 I a score=7867.000000 s hg38.chr3_KI270779v1_alt 172200 8 + 205312 gagagaga s panTro5.chr3 200158950 8 + 202621043 gagagaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115647 8 + 190779 gagagaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6334 8 - 189199 gagagaga i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917090 8 + 123690457 tatatata i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 454677 8 - 91754291 gatagata i chlSab2.chr15 C 0 I 37 s colAng1.NW_012118932v1 494089 8 + 7796314 TATAGAGA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 638257 276 - 1977891 I e cerAty1.NW_012004056v1 521319 426 + 16847902 I e macFas5.chr2 106117 527 + 192460366 I e rheMac8.chr2 202499087 262 + 204787373 I a score=-12946.000000 s hg38.chr3_KI270779v1_alt 172208 8 + 205312 gagaa----------------gaa s panTro5.chr3 200158958 6 + 202621043 gagag------------------a i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115655 12 + 190779 gagaga---aga---------gag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6342 21 - 189199 gagaag---agagagagagagaaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917098 15 + 123690457 tatatatatata---------tat i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 494097 1 + 7796314 --G--------------------- i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 638257 276 - 1977891 I e chlSab2.chr15 454685 37 - 91754291 I e cerAty1.NW_012004056v1 521319 426 + 16847902 I e macFas5.chr2 106117 527 + 192460366 I e rheMac8.chr2 202499087 262 + 204787373 I a score=6537.000000 s hg38.chr3_KI270779v1_alt 172216 8 + 205312 agagagag s panTro5.chr3 200158964 8 + 202621043 agaaagag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115667 8 + 190779 agagagag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6363 8 - 189199 agagagag i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917113 8 + 123690457 atatagag i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 454722 8 - 91754291 atatatag i chlSab2.chr15 I 37 C 0 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 494098 0 + 7796314 C e manLeu1.NW_012102020v1 638257 276 - 1977891 I e cerAty1.NW_012004056v1 521319 426 + 16847902 I e macFas5.chr2 106117 527 + 192460366 I e rheMac8.chr2 202499087 262 + 204787373 I a score=14472.000000 s hg38.chr3_KI270779v1_alt 172224 8 + 205312 agagagaa s panTro5.chr3 200158972 8 + 202621043 agagagag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115675 8 + 190779 agagagag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6371 8 - 189199 agagaaag i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917121 8 + 123690457 agagagag i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 521745 8 + 16847902 agagagag i cerAty1.NW_012004056v1 I 426 C 0 s chlSab2.chr15 454730 8 - 91754291 agagagag i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 494098 0 + 7796314 C e manLeu1.NW_012102020v1 638257 276 - 1977891 I e macFas5.chr2 106117 527 + 192460366 I e rheMac8.chr2 202499087 262 + 204787373 I a score=208615.000000 s hg38.chr3_KI270779v1_alt 172232 63 + 205312 agaaagagagagagagaaagagagacagggtcttctgtcacccaggctgaagttcagcggtg-t s panTro5.chr3 200158980 63 + 202621043 agaaagagagagagagaaagagagacagggtcttctgtcacccaggctgaagttcagcggtg-t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115683 63 + 190779 agaaagagagagagagaaagagagaCAGGGTCTTCTGTCACCCAGGCTGAAGTTCAGCGGTG-T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6379 63 - 189199 aaagagagagagagagagagagagaCAGGGTCTTCTGTCACCCAGGCTGAAGTTCAGCGGTG-T i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917129 63 + 123690457 agagagagagagagagagagagagagagGGTCTTCTGCCACCCAGGCTGAAGTCCAGCGGTG-T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499349 63 + 204787373 agagagagagagagagagagggaAACAAGGTCTTCTGTCCCCCAGGCTGAAGTTCAGCCGTG-T i rheMac8.chr2 I 262 C 0 s cerAty1.NW_012004056v1 521753 63 + 16847902 agagagagagattgagagagagaagcagagTCTTCTGTCCCCCAGGCTGAAGTTCAGCGGTA-T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454738 64 - 91754291 agagagagagagagagagagagagagagTGTCTTCTGTCCCCCAGGCTGAAGTTCAGCGGTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638533 63 - 1977891 agagagagagagagagagagagaAGCAGAGTCTTCTGTCCCCCAGGCTGAAGTTCAGCCGTG-T i manLeu1.NW_012102020v1 I 276 C 0 s colAng1.NW_012118932v1 494098 45 + 7796314 ------------------AGAGAGACAGAGTCTTCTGTCACCGAGGCTGAAGTTCAGCAGTG-T i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 459497 58 - 608964 I e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 106117 527 + 192460366 I a score=246296.000000 s hg38.chr3_KI270779v1_alt 172295 54 + 205312 aatTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtaa s panTro5.chr3 200159043 54 + 202621043 aatTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115746 54 + 190779 AATTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6442 54 - 189199 AATTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917192 54 + 123690457 AATTGgccttctgagtagctgggactacaggcacacacaatcatgcctgggtaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499412 54 + 204787373 AATTGgccttctgagtagctgggactacaggcacacacaaccacgcctgggtca i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 521816 54 + 16847902 AATTGgccttctgagtggctgggactacaggcacacacaaccatgcctgggtca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454802 54 - 91754291 AACTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638596 54 - 1977891 AATTGgccttctgagtggctgggactacaggcacacacaaccatgcctgggtca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494143 54 + 7796314 AATTGgccttctgagtagctgggactacaggcacacacaaccatgcctggggca i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459555 54 - 608964 actcagcctcccgagcagctgggactacaggtgcctaccaccacggctggctat i otoGar3.GL873829 I 58 C 0 e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 106117 527 + 192460366 I a score=423713.000000 s hg38.chr3_KI270779v1_alt 172349 93 + 205312 tttttttatttctgtagaggtggaatcttgctatgttgcctaggctggtgtcgaa-------------------------------ctcccggcctcaagcgatcctcctgcttcagactctca s panTro5.chr3 200159097 93 + 202621043 tttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtcgaa-------------------------------ctcccggcctcaagcgatcctcctgcttcagactctca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115800 92 + 190779 -ttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtcgaa-------------------------------ctcccggcctcaagcgatcctcctgcttcagactctca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6496 93 - 189199 tttttttatttttgtagaggtggaatcttgctatgttgcctaggctgctgtcgaa-------------------------------ctcccggcctcaagcgatcctcctgcttcagactctca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917246 93 + 123690457 tttttttatttttgtaaaggtggaatcttgctatgttgcctaggctggtgtcgaa-------------------------------ctcctggcctcaagcgatcctcctgcttcagcctctca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499466 93 + 204787373 tttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaa-------------------------------ctcccggcttcaagtgatcctccggcttcagcctctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 106644 124 + 192460366 ttttttttttttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggccagatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccg i macFas5.chr2 I 527 C 0 s cerAty1.NW_012004056v1 521870 93 + 16847902 cttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaa-------------------------------ctcccggcctcaagtgatcctccggcttcagcctctca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 454856 93 - 91754291 ttttttaatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaa-------------------------------ctcccggcctcaagtgatcctcctgcttcagcctctca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638650 93 - 1977891 cttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaa-------------------------------ctcccggcctcaagtgatcctccggcttcagcctctca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494197 93 + 7796314 tttttttatttttgtagaggtggaatcctgccatgttgccaaggctggtgtggaa-------------------------------ctcccggcttcaagtgatcctcctgcttcagcctctca i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459609 79 - 608964 -----------ttttagagacag-gtcttg--atctagctcaggctggtcttgaa-------------------------------cacgtgagctcaggcaatccacttgcctcggcctccca i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e dasNov3.JH569502 3930175 83 + 6579706 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=191268.000000 s hg38.chr3_KI270779v1_alt 172442 46 + 205312 aagtactgggattaaaggtgtgagccaccgctcccACTCTT--------------------------------------------------------------------------TTTTT s panTro5.chr3 200159190 46 + 202621043 aagtactgggattaaaggtgtgagccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115892 46 + 190779 aagtactgggattaaaggtgtgagccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6589 46 - 189199 aagtactgggattaaaggtgtgagccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917339 46 + 123690457 aagtaccgggattaaatgtgtgagccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499559 46 + 204787373 aagcactgggattaaaggtgtgaaccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 106768 46 + 192460366 agtagctgggactacaggcgcccgccacctcgcccggctgg--------------------------------------------------------------------------ttttt i macFas5.chr2 C 0 I 125 s cerAty1.NW_012004056v1 521963 46 + 16847902 aagcactgggattaaaggtgtgaaccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 454949 46 - 91754291 aagcactgggattaaaggtgtgaaccactgctcccACCCTT--------------------------------------------------------------------------TTTGT i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 638743 46 - 1977891 aagcactgggattaaaggtgtgaaccaccgctcccACCCTT--------------------------------------------------------------------------TTTTT i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 494290 46 + 7796314 aagtactgggattaaaggtgtgaaccaccactcccACCCTT--------------------------------------------------------------------------TTTTT i colAng1.NW_012118932v1 C 0 I 2 s otoGar3.GL873829 459688 120 - 608964 gagtgctagcattacaggcatgagccacctcgcccagccTCAGCTTACTCTTTTTAGTGTTCATTAGCTCCCTAGCTGTTCTCAAACATTTTACTTGGTTTGTCTGGTTGGTTGGTTTTT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3930258 44 + 6579706 agttcctggaatttacggta-atcccatcactttctctcct--------------------------------------------------------------------------tctt- i dasNov3.JH569502 I 83 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=146288.000000 s hg38.chr3_KI270779v1_alt 172488 36 + 205312 CAACCTCAGTGCTCCTAGATAGTTGGCAAGATGATA s panTro5.chr3 200159236 36 + 202621043 CTACCTCAGTGCTCCTAGATAGTTGGCAAGATGATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115938 36 + 190779 CTACCTCAGTGCTCCTAGATAGTTGGCAAGATGATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6635 36 - 189199 CAACCTCAGTGCTCCTAGATAGTTGGCAAGATGATA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917385 36 + 123690457 TAACCTCAGTGCTCCTAGATAGTTGGCAAGATGATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499606 36 + 204787373 AAATCTCAGTGCTCCCAGATAGTTGGCAAGATGATA i rheMac8.chr2 I 1 C 0 s cerAty1.NW_012004056v1 522010 36 + 16847902 AAACCTCAGTGCTCCCGGATAGTTGGCAAgatgata i cerAty1.NW_012004056v1 I 1 C 0 s chlSab2.chr15 454996 36 - 91754291 AAACCTCAGTGCTCCCAGATAGTTGGCAAgatgata i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 638790 36 - 1977891 AAACCTCAGTGCTCCCAGATAGTTGGCAAgatgata i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 494338 36 + 7796314 AAACCTCAGTGCTCTCAGATAGTTGGCAAgatgcta i colAng1.NW_012118932v1 I 2 C 0 s otoGar3.GL873829 459808 36 - 608964 TAACCTCAGTGCTCATAGTTGGTTGgagggatgaag i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3930302 6 + 6579706 ------------------------------atggga i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 479 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 106814 125 + 192460366 I a score=308384.000000 s hg38.chr3_KI270779v1_alt 172524 71 + 205312 CTCAGAGAGACAAAG-TCTCAGGGAAGAATTCAGCTTCAAGTCCACTTTCTGGAATTGActgtaa--ttcgcca s panTro5.chr3 200159272 71 + 202621043 TTCAGAGAGACAAAG-CCTCAGGGAAGAATTTAGCTTCAAGTCCACTTTCTGGAATTGActgtaa--ttcgcca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 115974 71 + 190779 TTCAGAGAGACAAAG-TCTCAGGGAAGAATTTAGCTTCAAGTCCACTTTCTGGAATTGActgtaa--ttcgcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6671 71 - 189199 TTCAGAGAGACAAAG-TCTCAGGGAAGAATTTAGCTTCAAGTCCACTTTCTGGAATTGActgtaa--ttcgcca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917421 70 + 123690457 TTCAGAGAGACAAAG-TCTCAGGGAAGAATTTAGGTTCAAGTACACTTTCTGGAATTGACTA-AT--TCCGCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499642 72 + 204787373 TTCAGAGAGATAAAG-TCTCAGGGAAGAATTTAGGCTCAAGTACACTTTCTGGAATTGACTGTAA-TTCCGCCA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 522046 73 + 16847902 ttcagagagataaag-cctcagggaagaatttaggctcaagtatactttccggaattgactgtaatttccgcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 455032 72 - 91754291 ttcagagagataaag-tctcagggaagaatttaggctcaagtacactttctggaattgactgtaa-ttccgcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638826 73 - 1977891 ttcagagagataaag-cctcagggaagaatttaggctcaagtacactttccggaattgactgtaatttccgcca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494374 72 + 7796314 ttcagagagacaaag-tctcagggaagaatttaggctcaagtacactttctggaattgactgtaa-ttccgcca i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459844 72 - 608964 ttcacagagagaaaactctcagggaaggatttaggttccaggacgcttcctggaggtgacgataa--tttacca i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29094423 68 + 31377067 cacagaaagacaaac-tcccagagaaga----aagtttgagtgcagttcctggagttgactataa-ttccacca i canFam3.chr33 I 479 C 0 s dasNov3.JH569502 3930308 41 + 6579706 ----gcaatttagac-tctcaagggag-----------------------tgagagtgattatga--atca--- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 106814 125 + 192460366 I a score=63561.000000 s hg38.chr3_KI270779v1_alt 172595 12 + 205312 -ccttctcttctt s panTro5.chr3 200159343 12 + 202621043 -ccttctcttctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116045 12 + 190779 -ccttctcttctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6742 12 - 189199 -ctttctcttctt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917491 12 + 123690457 -CTTTCTCTTCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499714 12 + 204787373 -CTTTCTCATCTT i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 522119 12 + 16847902 -ctttctcatctt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 455104 12 - 91754291 -ctttctcatctt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638899 12 - 1977891 -ctttctcatctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494446 12 + 7796314 -cttcctcatcct i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459916 12 - 608964 -ctttctcttctt i otoGar3.GL873829 C 0 I 3 s mm10.chr16 65461576 12 - 98207768 -CCTTCCCTTCCT i mm10.chr16 I 1200 C 0 s canFam3.chr33 29094491 12 + 31377067 -ctttctcttctt i canFam3.chr33 C 0 I 216 s dasNov3.JH569502 3930349 4 + 6579706 gctt--------- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 106814 125 + 192460366 I a score=35726.000000 s hg38.chr3_KI270779v1_alt 172607 9 + 205312 cagacagta s panTro5.chr3 200159355 9 + 202621043 cagacagta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116057 9 + 190779 cagacagta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6754 9 - 189199 aagacagta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917503 9 + 123690457 AAGACAGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499726 9 + 204787373 AAGAGAGCA i rheMac8.chr2 C 0 C 0 s cerAty1.NW_012004056v1 522131 9 + 16847902 aagagagca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 455116 9 - 91754291 aagagagca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638911 9 - 1977891 aagagagca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494458 9 + 7796314 aagagagca i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459931 9 - 608964 aagagaggc i otoGar3.GL873829 I 3 C 0 s mm10.chr16 65461588 9 - 98207768 GAGAGAGCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29094719 9 + 31377067 aagaaagca i canFam3.chr33 I 216 C 0 s dasNov3.JH569502 3930353 5 + 6579706 ----taatg i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e macFas5.chr2 106814 125 + 192460366 I a score=14494.000000 s hg38.chr3_KI270779v1_alt 172616 3 + 205312 -act s panTro5.chr3 200159364 3 + 202621043 -att i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116066 3 + 190779 -att i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6763 3 - 189199 -att i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917512 3 + 123690457 -ATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202499735 3 + 204787373 -ATT i rheMac8.chr2 C 0 I 315 s macFas5.chr2 106939 3 + 192460366 -gcc i macFas5.chr2 I 125 C 0 s cerAty1.NW_012004056v1 522140 3 + 16847902 -att i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 455125 3 - 91754291 -att i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638920 3 - 1977891 -att i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494467 3 + 7796314 -att i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459940 3 - 608964 -att i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65461597 3 - 98207768 -ATT i mm10.chr16 C 0 C 0 s canFam3.chr33 29094728 3 + 31377067 -att i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3930358 3 + 6579706 tat- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 591100 872 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1207406.000000 s hg38.chr3_KI270779v1_alt 172619 160 + 205312 tagactctcaagtgagtgataatggttatgaaccagctctaa-ttgttaaaa----aagtgactcacgtgcaagcttctgcacttcattaatagtaactgcttactggtgacacacttGTAAACCGACGTGGACAAAGGCACGGGCTGAACCGCAGAGCC-CTCTG s panTro5.chr3 200159367 160 + 202621043 tagactctcaagtgagtgataatggttatgaaccagctctaa-cagttaaaa----aagtgactcacgtgcaagcttctgcacttcattaatagtaactgcttactggtgacacacttGTAAACCGACGTGGACAAAGGCACGGGCTGAACCGCAGAGCC-CTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116069 160 + 190779 tagactctcaagtgagtgataatggttatgaaccagctctaa-tagttaaaa----aagtgactcacgtgcaagcttctgcacttcattaatagtaactgcttactggtgacacacttGTAAACCGACGTGGACAAAGGCACGGGCTGAACCGCAGAGCC-CTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6766 160 - 189199 tagactctcaagtgagtgataatggttatgaaccagctctaa-ttgttaaaa----aagtgactcacttgcaagcttctgcacttcattaatagtaactgcttactggtgacacacttGTAAACCGACGTGGACAAAGGCATGGGCTGAACCGCAGAGCC-CTCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917515 160 + 123690457 TAGACTCTCAAGTGAATGATAATGGTTAtgaaccagctctaa-ttgttaaaa----aagtgactcacttgcaagcttctgcacttcattaatagtaactgcttactagtgacacacttgtaaactgaCGTGGACAAAGGCACGGACTGAACTGCAGAGCC-CTCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202500053 160 + 204787373 TAGACTCTcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagcgactcactcgcaagcttctgcacttcattaatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGCCACGGACTGAACTGCAGAGCC-CGCTG i rheMac8.chr2 I 315 C 0 s macFas5.chr2 106942 160 + 192460366 tagactctcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagcgactcactcgcaagcttctgcacttcattaatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGCCACGGACTGAACTGCAGAGCC-CGCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 591972 160 + 19675229 TAGACTCTcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagcgactcactcacaagcttctgcacttcattaatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGGCACGGACTGAACCGCAGAGCC-CGCTG i macNem1.NW_012014355v1 I 872 C 0 s cerAty1.NW_012004056v1 522143 160 + 16847902 tagactctcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagcgactcactcgcaagcttctgcacttcattaatagtaactgcttgctggtgacacgcttcTAAACCCACGTGGACAAAGGCACGGACTGAACCGCAGAGCC-CGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 455128 160 - 91754291 tagactctcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagcgactcactcgcaagcttctgcacttcaataatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGGCACGGGCTGAACTGCAGAGCC-CGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 638923 160 - 1977891 tagactctcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagcgactcactcgcaagcttctgcacttcattaatagtaactgcttgctggtgacacgcttcTAAACCCACGTGGACAAAGGCACGGACTGAACCGCAGAGCC-CGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494470 160 + 7796314 tagactctcaagtgagtgagaatggttatgaatcagctctaa-ttgttaaaa----aagtgactcactcgcaagcttctgcacttcattaatagtaagtgcttgctggtgacacacttcTAAACCCATGTGGACAAAGGCATGGGCTGAACTGCAGAGCC-CTCTG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 459944 157 - 608964 aggatgatcaagtgagtatgaatgattatgaatcatctctcatttattaaaaa-agaagtgactcacttgcaagctcctgtactttattaatagcaactacttactgttgacacacttcTATGCCAATGTGGACAAAGGTGT--------CCACAGAGCTGTTCTA i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65461600 157 - 98207768 CAGACTTTCAAGTGAGAGA----AGTTGTGAATCGGCTCTAA-TTTACACAAG-TCGAGTGACTCACCCGCAAACCAGTGTACTTTATTAATAG-AACTGCTTCCTGG-GAGAACTGTCTAAACTTTTGTAGACAAAGGAGTGGGCGGAGCTGCAGAGTA-CCTTG i mm10.chr16 C 0 I 2469 s canFam3.chr33 29094731 164 + 31377067 tagactttcaggttagtgagagtgattatgagtcaactctaa-ttttttaaaatataagtgactcatttgcaagctcctgtactttgttaatagtaattaatgacaggtgacacacttctaagctggtGTGAACAAATGCACAGGTTGAGCTCCAGAGCT-GAGTT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3930361 117 + 6579706 -----tagcgaacaagtga-----------------ctcata-t-------------------------gcaagctgttatactttattaatagtaactaattactgctgacacacttttaagctgatGTGGATGAACCCATGGG-TGAGCTGAGGAGCTGTGCTC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1029225.000000 s hg38.chr3_KI270779v1_alt 172779 165 + 205312 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCAAAATGACTCCACTTCAACTTTAAACGGAAACTTCCTTTAGTTGGAATTAGGTTGAGATTTGTTGATAGGACTCTAAACTCGATGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT s panTro5.chr3 200159527 94 + 202621043 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCAAAATGACTCCACTTCAACTTT-----------------------------------------------------------------------CTCCTGGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116229 94 + 190779 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCAAAATGACTCCACTTCAACTTT-----------------------------------------------------------------------CTCCTGGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 6926 165 - 189199 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCAAAATGACTCCACTTCAACTTTAAATGGAAACTTCCTTTAGTTGGAATTAGGATGAGATTTGTTGATAGGACTGTAAACTCGATGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917675 166 + 123690457 GGAGGTCGCTGGGCCCCTGGCTTAA-------------TCCAAAATGACTCCACTTCAACTTTAAATGGAAACTTCCTTTAGTCGGAATTATGATGACATTTGTTGATAGGACTCTAAATTCGATGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTTGGGTTTCTCCGAGTAAGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202500213 165 + 204787373 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACTCTAAACTCGACGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 107102 165 + 192460366 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACtctaaactcgacgcctgctttctcctagagaaaatttgcaaaactt-ggtttctccaaataaggtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 592132 165 + 19675229 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACTCTAAACTCGACGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 522303 165 + 16847902 GGAGGTCCCTGGGcccctggcttaa-------------tccgaaatgactctgcttcaattttaaacagacacttcctttagttggaattatgatgagatttgttgataggactctaaactcgacgcctgctttctcctagagaaaatttgcaaaactt-ggtttctccaaataaggtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 455288 165 - 91754291 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCGAAATGGCTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGCTGGAATTATGATGAGATTTGTTGATAGGACTCTACactcaatgcctgctttctcctagagaaaatttgcaaaactt-ggtttctccaaataaggtt i chlSab2.chr15 C 0 I 330 s manLeu1.NW_012102020v1 639083 165 - 1977891 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACTCTAAACTCGACGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 494630 165 + 7796314 GGAGGTCCCTGGGCCCCTGGCTTAA-------------TCCGAAATGACTCCGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACtctaaactcgacgcctgctttctcctagagaaaatttgcaaaactt-ggtttctccaaataaggtt i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 460101 161 - 608964 GGAAGTCCTTGGGCTCCT-ACTTAA-------------TTCAAAATGACACCACTTCAAC--TAAAATAGAACTTTCGTTATTCAGAATTATAAGTAGATTTGTTTATAGAACTCCAAACTCTATGCCTGCTCTCTCCTTACTATAA-TAACAAAAGTT-GATTTCTTCAAATAAGGTT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29094896 161 + 31377067 GGGGGTCCTTGGGTCCCTACTTAAC-------------ACCCAAATAAGTCTACTTTAACCTTAAAAGGAGACTTCCTTTATTCAAAAT---AAGTAGATTTGCTTATAGGACTTCCAATTCTATGCTTGAACCCTCTTCAATAAAGTTC-CAAAATTT-GGTTTCTCCAGATAACGTT i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3930478 175 + 6579706 AGAGGTCCTTGGACCTCTTACCCAAATGACTTACCCTTACTCAAATGACT--GCTCCAACTTTGAAAGGGGACTTCCTCTTTTCAGGATTATGAGTAGACTTGTTTATAGGACTCTAATATCCATGTCTCCTTTCTTCTCAATAAAA-GTGCAGAACTT-GGTTTCTCCAAATAAGGTT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1379028.000000 s hg38.chr3_KI270779v1_alt 172944 185 + 205312 TAAATTTAAAAACATTCTC----TATGCAGTT-ATTTTTAACCTTATTTCATTTCCCTGATAACATAATTAAGAGcatttgtctatcatcaggctttgagta----gacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggcaattaacatcttttcagagcctgcatcacctctgctaaa s panTro5.chr3 200159621 189 + 202621043 TAAATTTAAAAACATTCTC----TATGCAGTT-ATTTTTAACCTTATTTCATTTCCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggccattaacatcttttcagagcctgcatcgcctctgctaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116323 189 + 190779 TAAATTTAAAAACATTCTC----TATGCAGTT-ATTTTTAACCTTATTTCATTTCCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggccattaacatcttttcagagcctgcatcgcctctgctaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 7091 189 - 189199 TAAATTTAAAAACATTCTC----TATGCAGTT-ATTTTTAACCTTATTTCATTTCCCTGATAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggcaattaacatcttttcagagcctgcatcacctctgctaaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120917841 167 + 123690457 TAAATTTAAAAACATTCTC----TATGCAGTT-ATTTTTAACCTTATTTCATTTCCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggcaattaaca----------------------tctgctcaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202500378 189 + 204787373 TAAATTTAAAAACATTCTC----CACGCAGTT-ATTGTTAACCTTACTTCATTTTCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i rheMac8.chr2 C 0 I 3 s macFas5.chr2 107267 189 + 192460366 taaatttaaaaacattctc----cacgcagtt-attgttaaccttacttcattttcctgagaacataattaagagcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 592297 189 + 19675229 TAAATTTAAAAACATTCTC----CACGCAGtt-attgttaaccttacttcattttcctgagaacataattaagagcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 522468 189 + 16847902 taaatttaaaaacattctc----cacgcagtt-attgttaaccttacttcattttcctgagaacgtaattaagagcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i cerAty1.NW_012004056v1 C 0 I 3 s chlSab2.chr15 455783 189 - 91754291 taaatttaaaaatattctc----tacgcagtt-attgttaaccttacttcattttcctgagaacataattaagagcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgctcaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i chlSab2.chr15 I 330 I 3 s manLeu1.NW_012102020v1 639248 189 - 1977891 TAAATTTAAAAACATTCTC----CACGCAGTT-ATTGTTAACCTTACTTCATTTTCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i manLeu1.NW_012102020v1 C 0 I 3 s colAng1.NW_012118932v1 494795 188 + 7796314 taaatttaaaaacattctc----tacgcagtt-attgttaaccttacttcattttcctgagaacataattaagagcatttgtctatcatcaggctttgagtgaacagacaggagctatataggtgc-aagctttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTGTTTTACA i colAng1.NW_012118932v1 C 0 I 3 s otoGar3.GL873829 460262 184 - 608964 TAAATTTTGAAACATTTTC----TTCTCAATT-ATCATTAACCTTATTTC-----CCTAAGAACATAATTAAGAGTatttgtctatcatctgtattagagcagacagacagaagctatttatgtgccagactttatgaac---ttatagattcttggccattaacatcttttcagagcctaaatcatctctgctaaa i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29095057 190 + 31377067 -TAGGTTAGAAACATTCCC----TACACAATT-ATCATTAACCTTATTTCATTTTCCTGAGAACATAAATAAAAGCATTC-TCTATTATCAGACTTTGAGATACCAGCCAGAAGCTATAGACATGCCAAACTTACTAAATTTATTATAGATTCTTGGCAATTAATATATTTTCAGAACTTGCATCACCTCTGTTAAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3930653 166 + 6579706 TAGATCAAAAAACATTCTCTTATTATAAGATTCATTGTTAACCTTATTTCATTTTCCTAAGAACAT-ATAAAGAGGACTGCTCTATCATCAGGCTTTGAGTAAACAGA----AACTATTTACTTGCTGAACTCTCTGAAT---TTGTAGACCCTCCTCAATTAA-GTCTTTTTAG---------------------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=27890.000000 s hg38.chr3_KI270779v1_alt 173129 27 + 205312 atcagtgtcagcagcagaagtttcatg s panTro5.chr3 200159810 27 + 202621043 atcagtatcagcagcagaagtttcatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116512 27 + 190779 atcagtatcagcagcagaagtttcatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 7280 27 - 189199 atcagtatcagcagcggaagtttcatg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120918008 27 + 123690457 atcagtatcaGCAGCAGAAGTTTGATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 107456 3 + 192460366 --------------------TCT---- i macFas5.chr2 C 0 C 0 s otoGar3.GL873829 460446 26 - 608964 atcaatatcagcagcaagttcctcat- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29095247 27 + 31377067 ATCAGTATTAGCAGCAAAAGTTTCATG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3930819 2 + 6579706 -------------------------TG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 592486 3 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 494983 3 + 7796314 I e manLeu1.NW_012102020v1 639437 3 - 1977891 I e chlSab2.chr15 455972 3 - 91754291 I e cerAty1.NW_012004056v1 522657 3 + 16847902 I e rheMac8.chr2 202500567 3 + 204787373 I a score=2127443.000000 s hg38.chr3_KI270779v1_alt 173156 332 + 205312 acagCACCGTCC----TTTTTTTTAAAGTAAAGATT---TTTGTAGTTCTTTATAAAAGTGG--CACAGCtccatttc-agcaatatggaagaagagataagcctctaatagcaaaaccagccgatgccagataaatacaggttataaatgtaataaatgttttct--aatgcagaggtgagatgagaagaaagaaagggaaacactcaggagtgaagaaGTTAACAACTAAGATGGTGAGTC----AATGCCCTT-G-GAAATGTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGACCCTCGG-TCACGACAC--TG--AACTGAGTT-TC-CCTGCAAA-AAGCTGGAACC s panTro5.chr3 200159837 332 + 202621043 acagCACCGTCC----TTTTTTTTAAAGTAAAGATT---TTTGTAGTTCTTTATAAAAGTGG--CACAGCTCCGTTTC-AGCGATATGGAAGAAGAGATAAGCCTCTAATAGCAAAACCAGCCGATGCCAGATAAATACAGGTTATAAATGTAATAAGTGTTTTCT--AATGCAGAGGTGAGATGAGAAGAAAGAAAGGCAAACACTCAGGAGTGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTT-G-GAAATGTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGACCCTCGG-TCACGACAC--TG--AACTGAGTT-TC-CCTGCAAA-AAGCTGGAACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116539 331 + 190779 acagCACCGTCC-----TTTTTTTAAAGTAAAGATT---TTTGTAGTTCTTTATAAAAGTGG--CACAGCTCCGTTTC-AGCGATATGGAAGAAGAGATAAGCCTCTAATAGCAAAACCAGCCGATGCCAGATAAATACAGGTTATAAATGTAATAAGTGTTTTCT--AATGCAGAGGTGAGATGAGAAGAAAGAAAGGCAAACACTCAGGAGTGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTT-G-GAAATGTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGACCCTCGG-TCACGACAC--TG--AACTGAGTT-TC-CCTGCAAA-AAGCTGGAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 7307 331 - 189199 acagCACCGTCC-----TTTTTTTAAAGTAAAGATT---TTTGTAGTTCTTTATAAAAGTGG--CACAGCTCCGTTTC-AGCGATATGGAAGAAGAGATAAGCCTCTAATAGCAAAACCAGCCGATGCCAGATAAATACATGTTATAAATGTAATAAATGTTTTCT--AATGCAGAGGTGAGATGAGAAGAAAGAAAGGGAAACACTCAGGAGTGAAGAAGTTAACAACTAAGACGGTGAGTC----AATGCCCTT-G-GAAATGTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGACCCTCGG-TCACGACAC--TG--AACTGAGTT-TC-CCTGCAAA-AAGTTGGAACC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120918035 331 + 123690457 ACAGCACCATCC----TTTTTTTTAAAATAAAGATT---TTTGTAGTTCTTTATAAAAGTGG--CACAGCTCCGTTTC-AGCGATATGGAAGAAGAGATAAGCCTCTAATAGCAAAACCAGCCGATGCCAGATAAATGCATGTCATAAATGTAATAAGTATTTTC---AATGCAGAGGTGAGATGAGAAGAAAGAAAGGGAAGCACTCAGGAGAGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTT-G-GAAATGTGCTGA------------------------CTGAAAGGA-------TGAA-------------AAAGGAAACGAAGCAAGACCTTCGG-TCACGACAC--TG--AACTGAGTT-TC-CCTGCAAA-AAGCTGGAAcc i nomLeu3.chr11 C 0 I 3742 s rheMac8.chr2 202500570 328 + 204787373 ACAGCACCATCC-----TTTTTTT----TAAAGATT---TTTGT--TTCTTTATAAAAGTGG--CACAGCTCCGTTTT-AGTGATAGGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCC-GTTAAATACATGTTATAAATGTAACAAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAGCTAAGATGGTGAGTCAATGAATGCCCTT-G-GAAATTTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGG-TCAGGACAC--TG--CCCTGAGTT-TC-CCTGCAAA-AAGCTGGAACC i rheMac8.chr2 I 3 C 0 s macFas5.chr2 107459 328 + 192460366 ACAGCACCATCC-----TTTTTTT----TAAAGATT---TTTGT--TTCTTTATAAAAGTGG--CACAGCTCCGTTTT-AGTGATAGGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCC-GTTAAATACATGTTATAAATGTAACAAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTCAATGAATGCCCTT-G-GAAATTTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGG-TCAGGACAC--TG--CCCTGAGTT-TC-CCTGCAAA-AAGCTGGAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 592489 328 + 19675229 ACAGCACCATCC-----TTTTTTT----TAAAGATT---TTTGT--TTCTTTATAAAAGTGG--CACAGCTCCGTTTT-AGTGATAGGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCC-GTTAAATACATGTTATAAATGTAACAAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGCGAGTCAATGAATGCCCTT-G-GAAATTTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGG-TCAGGACAC--TG--CCCTGAGTT-TC-CCTGCAAA-AAGCTGGAACT i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 522660 331 + 16847902 ACAGCACCATCC---TTTTTTTTT----TAAAGATT---TTTGT--TTCTTTATAAAAGTGG--CACAGCTCCGTTTT-AGCGATACGGAAGAAGATACGGGCCTTTAATAGCAAAACCAGCCGATGCCAGTTAAATACATGTTATAAATGTAACAAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTCAATGAATGCCCTT-G-GAAATTTGCTGA------------------------CTGAAAGCC-------TGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGG-TCAGGACAC--TG--CCCTGAGTT-TC-CCTGCAAA-GAGCTGGAACC i cerAty1.NW_012004056v1 I 3 C 0 s chlSab2.chr15 455975 330 - 91754291 ACAGCACCATCC----TTTTATTT----TAAAGATT---TTTGT--TTCTTTATAAAAGTGG--CACAGCTCCATTTT-AGCGATATGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCCAGTTAAATACATGTTATAAATGTAACGAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTCAATGAATGCCCTT-G-GAAACTTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGG-TCAGGACAC--TG--CCCTGAGTT-TC-CCTGCAAA-AAGCTGGAACC i chlSab2.chr15 I 3 C 0 s manLeu1.NW_012102020v1 639440 330 - 1977891 ACAGCACCATCCTTTTTTTTTTTT----TAAAGATT---TTCGT--TTCTTTATAAAAGTGG--CACAGCTCCGTTTT-AGCGATACGGAAGAAGATATGGGCCTTTAATAGCAAAACCAGCCGATGCCAGTTAAATACATGTTATAAATGTAACAAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTT-G-GAAATTTGCTGA------------------------CTGAAAGCC-------TGAA-------------AAAGGAAAGGAAGTAAGAGCTTCAG-TCAGGACAC--TG--CCCTGAGTT-TC-CCTGCAAA-AAGCTGGAACC i manLeu1.NW_012102020v1 I 3 C 0 s colAng1.NW_012118932v1 494986 325 + 7796314 ACAGCACCATCC-----TTTTTTT----TAAAGATT---TTTGT--TTCTTTATAAACGTGG--CACAGCTCCGTTTC-AGCAATATGGAAGAAGAGATAGGCCTTTAATAGCAAAACCAGCTGATGCCAGTTAAATACACGTTATAAATGTAACAAATGTTTTCT--AATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTCACAACTAAGATGGTGAGTC----AGTGCCCTT-G-GAAATTTGCTGA------------------------CTGAAAGGC-------TGAA-------------AAAGGAAAGGACGCAAGACCTTCCG-TGAGGACAC--TG--ACCTGAGTT-TC-CCTGCAAA-AAGCTGGAACT i colAng1.NW_012118932v1 I 3 C 0 s otoGar3.GL873829 460472 335 - 608964 ---acaaagtcc---aatttGTTTTAAGTAAAGATT---TTTGT--TTATTTACAGAAGTGGTATATAGCTTTATTCC-AGCAACACGGCAGAAGTGCTAAGCCTTTAActataaaaccggataagg----------------------tataataaatgtttttt--gatatagaactaagatcaaaagagagaaagaaaaacacccaagagtaaagatgttgaaaactaagctgataagtc----agtgccctcag-gaagtctgctgatttctgagatctacagcttggggttttaaagga-------tgaa-------------agaggaaaagaaataagatttttagatcaggacac--cc--aattgagttccc-cctgctta-aaagtggaact i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29095274 325 + 31377067 ATAGCATAGTCC-----ACTTTTT-AAGTAAATATT---TTTGT--TTGTTTATAA--GTGA--TACAACTCCATTTCTAGCAATATGGCAGAAGAGATAAGCCTTTAATCACAAAACCTGCAAATGCCAGATAA--------------TGT-----------------GTGCAGAGTTGAGACCAGAAGAAAGGAAGGGAAACAATCAGGGGCGAGGGAGCTGAAACCTGAGCTGGTAAGTC----AGGACTCTT-GCGGGATCTGCAGACCTTTGAGAT--------------CTAGAGTGT-------TGAGTGTTAAGGGCTCCATGGAAAAGGAGACACATTCTTAGA-TTAGGACAC--TGTAAATTGAATA-TCTTCTGCATC-AATCTGTCACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3930821 327 + 6579706 -----ACAGTCT-----ATTTTTT-AAATAAACGTTTGGTTGGT--TTGTTTATAAAAGTGA--TACTGttccatttccagcaataaggcagaggagataagcctcttactacaaaacctacaagtgccagata-----------tgagt-taacaaatgtttttttgaaggcagagtcaagatcaaaagaaagaaagggaaaccctcaggagtgaagaaGTTGGAAAATAAGGTGGCAAGTG----AATGCTCTC-A-GGGAATTGCTGG------------------------TTTCAGGGCGCTAGAGCTGA-------------ATGGGGGAGGAGACAAGTTCTTAGA-TCAGGACACAATA--AACTGAGTG-TC-CCTTTGGATAAAGTGTCTCC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1444723.000000 s hg38.chr3_KI270779v1_alt 173488 276 + 205312 --GCCAGCAAAAAAGGTGGACTAGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagcagaatgaaggatatagt----aa----cagaccagaactcacta----tagaaacaattaaaaatggaataaatgaagccaaagattagttctttgaaaataaa----acaaacacctggc---------------------------aagagaaagaaagtgggggggggtgtgggaggagg----gagagagagagac--agaaaagacacagatatcaagattattagaaacaaa-aaagggtacataacttc-ag---aaaaaaaa-ttt--aaga s panTro5.chr3 200160169 273 + 202621043 --GCCAGCAAAAAAGGTGGACTAGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagcagaatgaaggatatagt----aa----cagaccagaactcacta----tagaaacaattaaaaatggaataaatgaagccaaagattagttctttgaaaataaa----gcaaacatctggc---------------------------aagagaaagaaagtggggggg----tgggaggagg----gagagagagagac--agaaaagacacagatatcaagattattagaaacaaa-aaagggtacataacttc-ag---aaaaaaaaattt--aaga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 116870 274 + 190779 --GCCAGCAAAAAAGGTGGACTAGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagcagaatgaaggatatagt----aa----cagaccagaactcacta----tagaaacaattaaaaatggaataaatgaagccaaagattagttctttgaaaataaa----gcaaacatctggc---------------------------aagagaaagaaagtggggggg---gtgggaggagg----gagagagagagac--agaaaagacacagatatcaagattattagaaac-aa-aaagggtacataacttcaag---aaaaaaaaattt--aaga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 7638 272 - 189199 --GCCAGCAAAAAAGGTGGACTAGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagcagaatgaaggatatagt----aa----cagaccagaactcacta----tagaaacaattaaaaatggaataaatgaagccaaagattagttctttgaaaataaa----acaaacacctggc---------------------------aagagaaagaaagtgggggg-----tgggaggagg----gagagagagagac--agaaaagacacagatatcaagattattagaaacaaa-aaagggtacataacttc-ag---aaaaaaaaattt--aaga i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202500898 270 + 204787373 --GCCAGC-AAAACGGTGGACTGGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagtaaaacgaaggatatggt----aa----cagataagaactcgcta----tagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgataataaaacagacaaacacctggc---------------------------aagagaaagcgagagagtggg-------gaggagg------gagagagacac--ggaagagacacagataccaagatcattagaaacaaa-aaagggtacataacttc-ag----aaaaaaaattc--aaga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 107787 258 + 192460366 --GCCAGC-AAAACGGTGGACTGGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagtaaaacgaaggatatggt----aa----cagatcagaactcgcta----tagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgaaaataaaacagacaaacacctggc---------------------------aagagaaagcgagagagtggg-------gaggagg------gagagagacac-------------agataccaagatcattagaaacaaa-aaagggtacataacttc-ag-----aaaaaaattc--aaga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 592817 260 + 19675229 --GCCAGC-AAAACGGTGGACTGGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaaataaaacgaaggatatggt----aa----cagatcagaactcgcta----tagaaacaattaaaaatggaatcaatgaagccaaaggttagttctttgaaaatgaaacagacaaacacctggc---------------------------aagagaaagcgagagagtggg-------gaggagg------gagagagacac--gg---------agataccaagatcattagaaacaaa-aaagggtacataacttc-ag-----aaaaaaattc--aaga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 522991 269 + 16847902 --ACCAGC-AAAACGGTGGACTGGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagtaaaaggaaggatatggt----aa----cagatcagaactcgcta----cagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgaaaagaaaacagacaaacacctggc---------------------------aagagaaagagagagagtggg-------gaggagg------gagagagacac--agaagagacacagatatcaagatcattagaaacaaa-aaagggtacataacttc-ag-----aaaaaaattt--aaga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 456305 269 - 91754291 --GCCAGC-AAAATGGTGGACTAGAAAGACCAGGAA-----GAAAAAAGA--------Aaaaggaagtaaaacgaaggatatggt----aa----cagatcggaactcgcta----tagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgaaaataaaacagacaaacacctggc---------------------------aagagaaagagagagagtggg-------gaggagg------gagagagacac--agaagagacacagatatcaagatcattagaaacaaa-aaagggtacataacttc-ag-----aaaaaaattt--aaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 639770 269 - 1977891 --GCCAGC-AAAACGGTGGACTGGAAAGACCAGGAA-----GAAAAAAGA--------AAAAGGAAGTAAAATGAAGGATATGGT----AA----CAGATCAGAACTCCCTA----TAGAAACAATTAAAAATGGGATCAATGAAGCCAAAGGTTCGTTCTTCGAAAATAAAACAGACAAACACCTGGC---------------------------Aagggaaagagagagagtggg-------gaggagg------gagagagacac--agaagagaCGCAGATATCAAGATCATTAGAAACAAA-AAAGGGTACATAACTTC-AG-----AAAAAAATTT--AAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 495311 272 + 7796314 --GCCAGG-AAAAAGGTGGACTGGAAAGACCAGGAA-----GGAAAAAGA--------Aaaaggaagcaaaatgaaggatatggt----aa----cagaccaaaactcgcta----tagaaacaattaaaaatggaatcaatgaagccaaaggttagttctttgaaaataaaacagacaaacacctggc---------------------------aagagaaagagagagagtggg-------gaggagg------gagagagacacacagaagaggcacagatatcaagattattagaaacaga-aaagggtacatgacttc-ag----aaaaaaaattt--aaga i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 460807 276 - 608964 --accagtgaaaggggtgaactagaaagaTCAGAAA-----GAAGAAAGA--------Aaaagaaagtagaatgaaggatatagg----aa----tagaatagaatttgaca----cagaaacaattaaaaat--aatcaatgaagccaaaaattggttctttaaagataaagaggatgaactcctggc---------------------------aagggaaagaaatagagagag-------aaggaggaaaggagggaggaaggg--agagagggaaagaaaaaagagattactataaagaaa-aaagaagacataacttc-ag-----agaaaattttgaaaga i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29095599 288 + 31377067 --CTTAGA-GAAAAGGTGAACCA-AAAAATCAGAAA-----GAAGAAAGG--------Aaaagaaagcttaatgaaggatataattaagaa----aaggacataattaa--g----cagaaagaatttaaaatagaatca---aagccaaaagttgattttttgaagatatgctagacaaacttttggcaaggtgaattaagGCAGagaaagaaagaagaaaaagaaagaaagaaag-------aaagaaa------gaaagaaagaa--agaaagaa---agaaagaaagaaagaaagaaagaaagaaagaaaacagaa-----ag-----gaagaaTATT--AAGa i canFam3.chr33 C 0 I 5911 s dasNov3.JH569502 3931148 285 + 6579706 ACCTCAGT--GAAAGGTGGATTAGAAAAATCAAAAAGGGGGGAAAAAAGAGAGAGAGGAaaggaaagcagaatgaaggatataat----aaagttaaaaatagaacttaatgattttagaaacaactgaaaatagaatcaatgaacccaaaaattgtttctttgaaggaaaaaaaggcaaacgcctgga---------------------------aaggttaatt------------------aaggggg------gaaaaaaagga--aagaagataacagaaataaagaatattagtaatgaa-aaaggggatataacttt-agcaacaaaaaaaattg--aaga i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=599437.000000 s hg38.chr3_KI270779v1_alt 173764 103 + 205312 gacagtgctctgatgaatttataccaaaaagtatgaaaacttagataaattggatatactgtccttaaaaatataatttatcaaaaatgaattaagaaaaaaa s panTro5.chr3 200160442 101 + 202621043 gacagtgctctgatgaatttataccaaaaaatatgaaaac--agataaattggatatactgtccttaaaaatataatttatcaaaaatgaattaagaaaaaaa i panTro5.chr3 C 0 I 2 s panPan2.chrUn_NW_014024201v1 117144 101 + 190779 gacagtgctctgatgaatttataccaaaaaatatgaaaac--agataaattggatatactgtccttaaaaatataatttatcaaaaatgaattaagaaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 I 2 s gorGor5.CYUI01000254v1 7910 103 - 189199 gacagtgctctgatgaatttataccaaaaaatatgaaaacttagataaattggatatactgtccttaaaaatataatttatcaaaaatgaattaagaaaaaaa i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501168 103 + 204787373 gacagtgctctgatgaatctataccaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaa i rheMac8.chr2 C 0 I 5 s macFas5.chr2 108045 103 + 192460366 gacagtgctctgatgaatctataccaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaa i macFas5.chr2 C 0 I 5 s macNem1.NW_012014355v1 593077 103 + 19675229 gacagtgctctgatgaatctataacaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaa i macNem1.NW_012014355v1 C 0 M 631 s cerAty1.NW_012004056v1 523260 103 + 16847902 gccagtgctctgatgaattgataccaaaaaatatgaaaacatagataaattcgatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaa i cerAty1.NW_012004056v1 C 0 I 5 s chlSab2.chr15 456574 103 - 91754291 gacagtgccctgatgaatttataccaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaa i chlSab2.chr15 C 0 I 5 s manLeu1.NW_012102020v1 640039 103 - 1977891 GCCAGTGCTCTGATGAATTGATACCAAAAAATATGAAAACATAGATAAATTGGATATAGTGTCCTTAAAAATATAGCTTATCAAAAATGAATTAAGAAAAAAA i manLeu1.NW_012102020v1 C 0 I 5 s colAng1.NW_012118932v1 495583 103 + 7796314 gacagtgccctgatgaatttataccaaaaaatgtgaaaacatagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaa i colAng1.NW_012118932v1 C 0 I 5 s otoGar3.GL873829 461083 101 - 608964 cacaacactctgataaatgtatgccaaaaaatgtgaaaacttcaatgtattggaaat--ttttcttaaaaatatagcttatcaaaaatgaattaagagaaaaa i otoGar3.GL873829 C 0 I 7 s dasNov3.JH569502 3931433 100 + 6579706 --gagaaaactgacaaatttatgctaaaaaatgtaaaaacttagatagtttggaca-gttttctagaaaaacataacttatcaaaaACGAATTGAgaaagaaa i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=109990.000000 s hg38.chr3_KI270779v1_alt 173867 38 + 205312 cctggctaaaaactattttattttatttatttaatttt s panTro5.chr3 200160545 38 + 202621043 cctggctataaactattttattttatttatttaatttt i panTro5.chr3 I 2 C 0 s panPan2.chrUn_NW_014024201v1 117247 38 + 190779 cctggctataaactattttattttatttatttaatttt i panPan2.chrUn_NW_014024201v1 I 2 C 0 s gorGor5.CYUI01000254v1 8013 33 - 189199 cctggctataaac-----tattttatttatttaatttt i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501276 38 + 204787373 cctggctataaactatcttatttatttaattttgtttt i rheMac8.chr2 I 5 C 0 s macFas5.chr2 108153 38 + 192460366 cctggctataaactatcttatttatttaattttgtttt i macFas5.chr2 I 5 C 0 s cerAty1.NW_012004056v1 523368 38 + 16847902 cctggctataaacgatcttatttatttaattttgtgtt i cerAty1.NW_012004056v1 I 5 C 0 s chlSab2.chr15 456682 37 - 91754291 cctgGCTATAAACTA-CTTATTTATTTAAttttgtttt i chlSab2.chr15 I 5 C 0 s manLeu1.NW_012102020v1 640147 38 - 1977891 CCTGGCTATAAACTATCTTATTTATTTAAttttgtgtt i manLeu1.NW_012102020v1 I 5 C 0 s colAng1.NW_012118932v1 495691 38 + 7796314 cctggctataaactatcttatttatttaattttgtttt i colAng1.NW_012118932v1 I 5 C 0 s otoGar3.GL873829 461191 38 - 608964 cctgaatagaaaccattttaaactgcatcagcagtttt i otoGar3.GL873829 I 7 I 279 s dasNov3.JH569502 3931533 33 + 6579706 -ccagacacaaagtactatatattgtatgattcc---- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 593180 631 + 19675229 M e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=35555.000000 s hg38.chr3_KI270779v1_alt 173905 9 + 205312 atttattta s panTro5.chr3 200160583 9 + 202621043 atttattta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117285 9 + 190779 atttattta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8046 9 - 189199 atttattta i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501314 9 + 204787373 atttattta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 108191 9 + 192460366 atttattta i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 523406 8 + 16847902 atttattt- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 456719 9 - 91754291 atttattta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 640185 9 - 1977891 atttattta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 495729 9 + 7796314 atttattta i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3931566 9 + 6579706 attaatata i dasNov3.JH569502 C 0 I 3253 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 593180 631 + 19675229 M e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=1028690.000000 s hg38.chr3_KI270779v1_alt 173914 278 + 205312 tttttttg-aaacagagtctt-gctttgttgcccaggctggagtgcaatggcatgatctcagctcactgcaacctctgcctcccaggttcaagattctcctgcttcagcctcccaagta-gctg--ggattacaggcgcatgccaccacgccc-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcctggctggtctcaaactcctgacctcaggtgatccacccacctcgg-cctcccaaagtgctggga-ttacaggcatga--gccacct s panTro5.chr3 200160592 278 + 202621043 tttttttg-aaacagagtctt-gctttgttgcccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcccaggttcaagattctcctgcttcagcctcccaagta-gctg--ggattacaggcgcccgccaccacgccc-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcctggctggtctcaaactcctgacctcaggtgatctacccacctcgg-catcccaaagtgctggga-ttacaggcatga--gccacct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117294 278 + 190779 tttttttg-aaacagagtctt-gctttgttgcccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcccaggttcaagattctcctgcttcagcctcccaagta-gctg--ggattacaggcgcccgccaccacgccc-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcctggctggtctcaaactcctgacctcaggtgatctacccacctcgg-catcccaaagtgctggga-ttacaggcatga--gccacct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8055 278 - 189199 tttttttg-aaacagagtctt-gctttgttgcccaggctggagtgcaatggcatgatctcagctcactgcaacctctgcctcccaggttcaagattctcctgcttcagcctcccaagta-gctg--ggattacagacgcccactaccacgcct-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcctggctggtctcaaactcctgacctcaggtgatctacccacctcgg-catcccaaagtgctggga-ttacaggcatga--gccacct i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501323 286 + 204787373 tttttttgaagacagagtcttggctttgtcacccaggctgcagtgcagtggcatgatctcggctcactgcaatctctgcctcccaggttcaagattctcctgcctcagcctcccaagtaggctggccgattacaggcgcctgcc-caccgcctgggctaaattttgta-ttttagtagaggactgggtttcacctgttcgttcctggctggtcgt-cacttctgacctcgcttaatcca-ccacctcggccataccaacgtgctgggatttacaggcatgagggccacct i rheMac8.chr2 C 0 I 16 s macFas5.chr2 108200 278 + 192460366 tttttttg-agacagagtctt-gctttgtcacccaggctggagtgcagtggcatgatctcggctcactgcaatctctacctcccaggttcaagattctcctgcctcaacctcccaagta-gctg--cgattacaggcgcctgccaccacgcct-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcctggctggtctcaaactcctgacctcagctaatccacccacctcgg-catcccaaagtgctggga-ttacaggcatga--gccacct i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 523414 278 + 16847902 tttttttg-agacagagtctt-gctttgtcacccaggctggagtgcagtggcatgatctcggctcactgcaatctctgcctcccaggttcaagattctcctgcctcagcctcccaagta-gctg--cgattacaggcacatgccaccacgcct-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcttggctggtctcaaactcctgacctcagctaacccacccacctcgg-cattccaaagtgctggga-ttacaggcatga--gccacct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 456728 278 - 91754291 tttttttg-agacagagtctt-gctttgtcacccaggctggagtgcagtggcatgatctcggctcactgcaatctccacctcccaggttcaagattttccggcctcagcctcccaagta-gctg--cgattacaggcgcccgccaccacgcct-ggctaatttttgtatttttagtaga-gattgggattcaccatgtca-tcctgactggtctcaaactcctgacctcagctaatccacccacctcgg-catcccaaagtgctggga-ttacaggcatga--gccaccT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 640194 278 - 1977891 tttttttg-agacagagtctt-gctttgtcacccaggctggagtgcagtggcatgatctcggctcactgcaatctctgcctcccaggttcaagattctcctgcctcagcctcccaagta-gctg--cgattacaggcacgtgccaccacgcct-ggctaatttttgtatttttagtaga-gactgggtttcaccatgtcg-tcttggctggtctcaaactcctgacctcagctaatccacccacctcgg-cattccaaagtgctggga-ttacaggcatga--gccacct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 495738 278 + 7796314 tttttttc-agacagagtctt-gttttgtcacccaggctggagtgcagtggcatgatcttggctcactgcaatctccgcctcccaggttcaagattctcctgcctcagcctcccaagta-gctg--caattacaggcgcctgccaccacgcct-ggataattttagtatttttagtaga-gactgggtttcaccatgtcg-tcctggctggtctcaaactcctgacctcagctaatccacccaccttgg-catcccaaagtgctggga-ttacaggcatga--gccacct i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 593180 631 + 19675229 M e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=38132.000000 s hg38.chr3_KI270779v1_alt 174192 16 + 205312 cgcccggccactataa s panTro5.chr3 200160870 16 + 202621043 cgcccggccagtataa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117572 16 + 190779 cgcccggccagtataa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8333 16 - 189199 cgcccagccactataa i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 108478 16 + 192460366 cgaccggtcgctataa i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 523692 16 + 16847902 cgaccggtcgctataa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 457006 16 - 91754291 TCACCGGTCGCTATAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 640472 16 - 1977891 cgaccggtcGCTATAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 496016 16 + 7796314 cgactggtcgctataa i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 593180 631 + 19675229 M e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e rheMac8.chr2 202501609 16 + 204787373 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=777127.000000 s hg38.chr3_KI270779v1_alt 174208 224 + 205312 actattttaaattgaatcagcagtttaaaaaatat-aatctaggccgggt-gcggtggc-tcacgcctgtaatcctaacacgttgggagggtgaggcaggcgg-atcatgagg-tcaggagattgagaccatcctggctaacacggtgaaaaaaaaa--ttagctgggcatgg---tggcaggcgcctgtagtcc-cagctactctggaggctgaggcag-gagaacggcgtgaac s panTro5.chr3 200160886 224 + 202621043 actattttaaattgaatcagcagtttaaaaaatat-aatctaggccgggt-gcggtggc-tcacgcctgtaatcctaacactttgggagggtgaggcaggcgg-atcatgagg-tcaggagattgagaccatcctggctaacacggtgaaaaaaaaa--ttagcggggcatgg---tggcaggcgcctgtagtcc-cagctactctggaggctgaggcag-gagaacggcgtgaac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117588 223 + 190779 actattttaaattgaatcagcagtttaaaaaatat-aatctaggccgggt-gcggtggc-tcacgcctgtaatcctaacactttgggagggtgaggcaggcgg-atcatgagg-tcaggagattgagaccatcctggctaacacggtg-aaaaaaaa--ttagcggggcatgg---tggcaggcgcctgtagtcc-cagctactctggaggctgaggcag-gagaacggcgtgaac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8349 224 - 189199 actattttaaattgaatcagcagtttaaaaaatat-aatctaggccgggt-gcagtggc-tcacgcctgtaatcctaacactttgggagggtgaggcaggcgg-atcatgagg-tcaggagattgagaccatcctggctaacacggtgaaaaaaaaa--ttagctgggcatgg---tggcaggcgcctgtagtcc-cagctactctggaggctgaggcag-gagaacggcgtgaac i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501625 230 + 204787373 actattttaa--tgaatcaacagttttttaaatataaatctaggctaggcggaggtggcgtcacgcctgtatccgca----cttgggaggccgaggctggcggaatcacaaggttcaggggatcgagaccatcctggcttacacggtgaaaaaaaaaattaggccgggcacggcgttggtgggtgcctgtagtccacagctctcaggaaggctgaggcagagggaatggccggaac i rheMac8.chr2 I 16 C 0 s macFas5.chr2 108494 226 + 192460366 actattttaaattgaatcaacagtttaaaaaatac-aatctaggccgggc-gaggtggc-tcatgcctgtaatcccagcactttgggaggccgaggctggcgg-atcacaagg-tcaggagatcgagaccatcctggctaacacggtgaaaaaaaaaaattagccaggcatgg---tggtgggtgcctgtagtcc-cagctactcaggaggctgaggcag-gagaatggcgtgaac i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 523708 225 + 16847902 actattttaaattgaatcaacagttttaaaaatat-aatctaggctaggc-gaggtggc-tcacgcctgtaatcccagcactttgggaggccgaggctggcgg-atcacaagg-tcaggagatcgagaccatcctggctaacacggtgaaaaaaaaaa-ttagccgggcgtgg---tggcgggcgcctgtagtcc-cagctactcaggaggctgaggcag-gagaatggcgtgaac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 457022 226 - 91754291 ACTATTTTAAATTGAATCAACAGTTTAAAAAATAT-AATCTAggctgggc-gaggtggc-tcacgcctgtaatcccagcactttgggaggccaaggctggcag-atcacaagg-tcaggagatcgagaccatcctggctaacacggtgaaaaaaaaaaattagccgggcatgg---tggtgggtgcctgtagtcc-cagctactcaggaggctgaggcag-gagaatggcgtgaac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 640488 225 - 1977891 ACTATTTTAAATTGAATCAACAGTTTAAAAAATAT-AATCTAggctaggc-gaggtggc-tcacgcctgtaatcccagcactttgggaggccgaggctggcgg-atcacaagg-tcaggagatcgagaccatcctggctaacacggtg-aaaaaaaaaattagccgggcgtgg---tggcgggcgcctgtagtcc-cagctactcaggaggctgaggcag-gagaatggcgtgaac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 496032 225 + 7796314 actattttaaattgaatcagcagtttaaaaaatat-aatctaggccaggt-gaggtggc-ttacgcctgcaatcccagcactttgggaggccgagcctggcag-atcacgagg-tcaggagatcgagaccatcctggctaacatggtgaaaaaaaaaa-ttagccgggcatgg---tggtgggcgcctgtagtcc-cagctacttgggaggctgaggcag-gagaatggcgtgaac i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 593180 631 + 19675229 M e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=4190.000000 s hg38.chr3_KI270779v1_alt 174432 1 + 205312 c s panTro5.chr3 200161110 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117811 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8573 1 - 189199 c i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501855 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 108720 1 + 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 593827 1 + 19675229 c i macNem1.NW_012014355v1 M 631 C 0 s cerAty1.NW_012004056v1 523933 1 + 16847902 c i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 457248 1 - 91754291 c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 640713 1 - 1977891 c i manLeu1.NW_012102020v1 C 0 M 485 s colAng1.NW_012118932v1 496257 1 + 7796314 t i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=88740.000000 s hg38.chr3_KI270779v1_alt 174433 22 + 205312 tgggaggcagaggttgcagtga s panTro5.chr3 200161111 22 + 202621043 tgggaggcagaggttgcagtga i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117812 22 + 190779 tgggaggcagaggttgcagtga i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8574 22 - 189199 tgggaggcagaggttgcagtga i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501856 21 + 204787373 tgggaggc-gaggttgcagtga i rheMac8.chr2 C 0 I 27 s macFas5.chr2 108721 22 + 192460366 tgggaggcagaggttgcagtga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 593828 22 + 19675229 tgggaggcagaggttgcagtga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 523934 22 + 16847902 tgggaggcagaggttgcagtga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 457249 22 - 91754291 tgggaggcagaggttgcagtgt i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 496258 22 + 7796314 tgggaggcagaggttgcagtga i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 640714 485 - 1977891 M e nomLeu3.chr11 120918366 3742 + 123690457 I a score=57348.000000 s hg38.chr3_KI270779v1_alt 174455 19 + 205312 gcggagatcatgccattgc s panTro5.chr3 200161133 19 + 202621043 gcggagatcatgccattgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117834 19 + 190779 gcggagatcatgccattgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8596 19 - 189199 gccgagatcatgccattgc i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 108743 19 + 192460366 gccgagatcgtgccattgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 593850 19 + 19675229 gccgagatcgtgccattgc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 523956 19 + 16847902 gccgagatcgtgccattgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 457271 19 - 91754291 gccaagatcacgccattgc i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 496280 19 + 7796314 gccgagatcgtgccattgc i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 640714 485 - 1977891 M e rheMac8.chr2 202501877 27 + 204787373 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=1623626.000000 s hg38.chr3_KI270779v1_alt 174474 454 + 205312 actccagcctgggtgacaaggtgagactccgtctcaaaaaa-aaa--tatgtatatataatctatccaccccacaaaaaaatgcaggctaagatgagtttacaggcaaatcagacattcaaggaacaggtaatttcaattctatacaaacatattcagagtttggaacaggaggaaatgatctactaataattttataaggttggaaaccaaagataggataagaaagacaaactatagattaataagtcccagtaataatacatggaagcatcgtaaataaaatattagcaagcc---------------aaagtgcatcatggccgggcgcggcggctcacgcctgtaaccccaacactttggca-ggccgaggcaggcggatcacttgaggccgggagttccagaccagcctggccaacctagagaaaccccgtctctggtaaaaatac--aaaaaatttgtatttttttgg s panTro5.chr3 200161152 453 + 202621043 actccagcctgggtgacaaggtgagactccgtctcaaaaaa-aaa---atgtatatataatctatccaccccacaaaaaaatgcaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacgtattcagagtttggaacagaaggaaatgatctactaataattttataaggttggaaaccaaagataggataagaaagacaaactatagattaataagtcccagtaataatagatggaagcatcgtaaataaaatattagcaagcc---------------aaagtgcatcatggccgggcgcggcggctcacacctgtaaccccaacactttggca-ggccgaggcgggcggatcacttgaggctgggagttccagaccagcctggccaacctagagaaaccccgtctctggtaaaaatac--aaaaaatttgtatttttttgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 117853 453 + 190779 actccagcctgggtgacaaggtgagactccgtctcaaaaaa-aaa---atgtatatataatctatccaccccacaaaaaaatgcaggctaagatgaatttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacgtattcagagtttggaacaggaggaaatgatctactaataattttataaggttggaaaccaaagataggataagaaagacaaactatagattaataagtcccagtaataatagatggaagcatcgtaaataaaatattagcaagcc---------------aaagtgcatcatggccgggcgcggcggctcacacctgtaaccccaacactttggca-ggccgaggcgggcggatcacttgaggctgggagttccagaccagcctggccaacctagagaaaccccgtctctggtaaaaatac--aaaaaatttgtatttttttgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 8615 456 - 189199 actccagcctgggtgacaaggtgagactccgtctcaaaaaa-aaaaatatgtatatataatctatccaccccacaaaaaaatgcaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacgtattcagagtttggaacaggaggaaatgatctactaataattttatacagttggaaaccaaagataggataagaaagacaagctatagattaataagtcccagtaataatagatggaagcatcgtaaataaaatattagcaagcc---------------aaagtgcatcatggccgggcgcggcggctcatgcctgtaaccccaacactttggca-ggccgaggcgggcggatcacttgaggccgggagttccagaccagcctggccaacctagagaaaccccgcctctggtaaaaatac--aaaaaatttgtatttttttgg i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202501904 455 + 204787373 cctccagtctgggtgaagaggcaagactccgtctcaaaaaa--aa-atatgtatatataatctatccaccccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacttattcagagtttagaacaggaggaaatgatctgctactaattttataaggttggaaaccagagct-ggataagaaagacaaactacagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcatggccgaacgcagtcgctcacgcctgcaaccccaacac--tggcagggccgaagcgggtggatcacttggagccaggagttccagaccagcctggccaacctagagaaaccctgtctctggtaaaaatac-aaaaaaaattgtattttttttt i rheMac8.chr2 I 27 I 2 s macFas5.chr2 108762 456 + 192460366 actccagtctgggtgacaaggcgagactccgtctcaaaaaa-tat-atatgtatatataatctatccaccccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaagaggtaatttcaattctatacaaacttattcagagtttagaacgggaggaaatgatctgttactaattttataaggttggaaaccagagct-ggataagaaagacaaactacagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcatggctggacgcggtcgctcatgcctgtaaccccaacac--tggca-ggtcgaagcgggtggatcacttggggccaggagttccaaaccagcctggccaacctagagaaaccctgtctctggtaaaaatacaaaaaaaaattgtattttttttt i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 593869 456 + 19675229 actccagtctgggtgacaaggcgagactccgtctcaaaaaa-TAT-ATATGTATATATAATCTATCCACCccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaagaggtaatttcaattctatacaaacttattcagagtttagaacgggaggaaatgatctgttactaattttataaggttggaaaccagagct-ggataagaaagacaaactacagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcatggctggacgcggtcgctcatgcctgtaaccccaacac--tggca-ggtcgaagcgggtggatcacttggggccaggagttccaaaccagcctggccaacctagagaaaccctgtctctggtaaaaatacaaaaaaaaattgttttttttttt i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 523975 457 + 16847902 actccagtctgggtgacaaggcgagactctgtctcaaaaaa-tat-atatgtatatataatctatccaccccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacttattcagagtttagaacaggaggaaatgatctgctactaattttataaggttggaaaccagagct-ggataagaaagacaaactacagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcatggccgaacgcggtcactcacgcctgtaaccccaacac--tggcagggccaaagcgggtggatcacttggggccaggagttccagactagcctggccaacctagagaaaccctgtctctggtaaaaatacaaaaaaaaattgtattttttttt i cerAty1.NW_012004056v1 C 0 I 2 s chlSab2.chr15 457290 456 - 91754291 actccagtctgggtgacaaggcgagactccgtctcaaaaaa-aaT-ATATGTATATATAATCTATCCACCccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacttattcagagtttagaacaggaggaaatgatctgctactaattttgtaaggttggaaaccagagct-ggataagaaagacaaactagagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagcagaattttaaaaagtgcatcatggccggacacggtcgcttacgcctgtaaccccaacac--tggcagggccgaagcgggtggatcacttggggccaggagttccaaaccagcctggccaacctagagaaaccctgtctctggtaaaaatac-caaaaaaattgtattttttttg i chlSab2.chr15 C 0 I 1 s colAng1.NW_012118932v1 496299 457 + 7796314 actccagcctggatgacaaggcgagactccgtctcaaaaaaaaaa-aaatgtatatataatctatccaccccacaaaaaaatgtaggctaagatgagtttacagacaaatcagacattcaaggaacaggtaatttcaattctacacaaacttattcagagtttagaacaggaggaaatgatctgctactaattttataaggttggaaaccagagataggataagaaagacaaactatagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagagttttaaaaagtgcatcatggctggacgcggtcgctcacgcctgtaaccccaacgc--cggca-ggccgaagcaggtggatcacttgaggccaggagttccagaccagcctggccaacctagagaaaccctgtctctggtaaaaatac-caaaaaaattgtaattttctgg i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 640714 485 - 1977891 M e nomLeu3.chr11 120918366 3742 + 123690457 I a score=809765.000000 s hg38.chr3_KI270779v1_alt 174928 182 + 205312 attacaggtgtgtgctgggcttggtggcacacacctgtaatcccagctactcaggaggctgaggcacgagaattgcttgaacccaggaggcagagattgcagtgagccgagattgtgccactgcactccagcct-ggtgacagagcaggactctatc--------------------ttaaataaataaataaataaata----aat s panTro5.chr3 200161605 179 + 202621043 attacaggtgtgtgctgggcttggtggcacacacctgtaatcccagctactcaggaggctgaggcacgagaattgcttgaacccaggaggcagagattgcagtgagccaagattttgccactgcactccagcct-ggagacagagcaggactctatc--------------------ttaaataaataaataaataaata------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118306 179 + 190779 attacaggtgtgtgctgggcttggtggcacacacctgtaatcccagctactcaggaggctgaggcacgagaattgcttgaacccaggaggcagagattgcagtgagccaagattttgccactgcactccagcct-ggagacagagcaggactctatc--------------------ttaaataaataaataaataaata------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 9071 186 - 189199 attacaggtgtgtgctgggcttggtggcacacacctgtaatcccagctactcaggaggctgaggcacaagagttgcttgaacccaggaggcagagattgcagtgagccgagattgtgccactgcactccagcct-ggtgacagagcaggactctatc--------------------ttaaataaataaataaataaataaataaat i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202502361 179 + 204787373 attacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcacgagaattgcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc------------------------ataaataaataaataaata----aga i rheMac8.chr2 I 2 C 0 s macFas5.chr2 109220 179 + 192460366 attacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcaggaggctgaggcacgagaatggcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc------------------------ataaataaataaataaata----aga i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 594327 183 + 19675229 attacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcaggaggctgaggcacgagaatggcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc--------------------ataaataaataaataaataaata----aga i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 524434 183 + 16847902 attacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcacgagaattgcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc--------------------ataaataaataaataaataaata----aga i cerAty1.NW_012004056v1 I 2 C 0 s chlSab2.chr15 457747 199 - 91754291 attacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcacgagaattgctggaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtcccgcctgggtgacagagcaggactctgtc----ataaataaataaataaataaataaataaataaataaata----aGA i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 641210 203 - 1977891 ATTACAGCTGTGTgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcacgagaattgcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatcataaataaataaataaataaataaataaataaataaataaata----aGA i manLeu1.NW_012102020v1 M 485 C 0 s colAng1.NW_012118932v1 496756 174 + 7796314 attacagctgtgtgctgggcttggtggcatacacctgtaatcccag-tactcgggaggctgaggcacgaaaattgcttgaacccaggaggtggaggttgcagtgagccgagattgtgccagtgcagtccagcctgggtgacagagcaggactctatc----------------------------ataaataaataaata----aga i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461229 279 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=1568676.000000 s hg38.chr3_KI270779v1_alt 175110 293 + 205312 atttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggagg--ggagacacaatcacc---acagcagatacaggaaagttatttgataaaagtcaacacttactcctgtt-aaaactcctagcaaactaaaaagagacgttaactcttttaacctgataaacaatgtcaattataaccccgtgtaaacattatact-------taaaacaatagaaacgtttc-tgtaaaatcaggaataaaaacaag s panTro5.chr3 200161784 292 + 202621043 -tttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatgtaaacagaatggagg--ggagacacaatcacc---acagcagatacaggaaagttatttgataaaagtcaacacttactcctgtt-aaaactcctagcaaactaaaaagagacgttaactcttttaacctgataaacaatgtcaattataaccccgtgtaaacattatact-------taaaacaatggaaacgtttc-tgtaaaatcaggaataaaaccaag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118485 292 + 190779 -tttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatgtaaacagaatggagg--ggagacacaatcacc---acagcagatacaggaaagttatttgataaaagtcaacacttactcctgtt-aaaactcctagcaaactaaaaagagacgttaactcttttaacctgataaacaatgtcaattataaccccgtgtaaacattatact-------taaaacaatggaaacgtttc-tgtaaaatcaggaataaaaccaag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 9257 294 - 189199 atttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatgtaaacagaatggagg--ggagacacgatcacc---acagcagatacaggaaagttatttgataaaagtcaacacttactcctgttaaaaactcctagcaaactaaaaagagacattaactcttttaacctgataaacaatgtcaattataaccccgtgtaaacattatact-------taaaacaatggaaacgtttc-tgtaaaatcgggaataaaaccaag i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202502540 293 + 204787373 atttta-aaagtacatcacgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaacggagg--ggaaacacaatcacc---gcagcagatacaggaaaattatttgataaaagtcagcacttattcccgtt-aaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatact-------taaaacactggaaacgtttc-cgtaaaatcaggaatgaaaccaag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 109399 293 + 192460366 atttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaactcaccatataaacagaatggagg--ggaaacacaatcacc---gcagcagatacaggaaaattatttgataaaagtcagcacttattcccgtt-aaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatact-------taaaacactggaaacgtttc-cgtaaaatcaggaatgaaaccaag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 594510 293 + 19675229 atttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaactcaccatataaacagaatggagg--ggaaacacaatcacc---gcagcagatacaggaaaattatttgataaaagtcagcacttattcccgtt-aaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacatcatact-------taaaacactggaaacgtttc-cgtaaaatcaggaatgaaaccaag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 524617 293 + 16847902 atttta-aaagtacatcacgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggagg--ggaaacacaatcacc---gcagcagatacaggagaattatttgataaaagtcagcacttattcccgtt-aaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcagttataaccctatgtaaacattatact-------taaaacactggaaacgtttc-cgtaaaatcaggaataaaaccaag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 457946 296 - 91754291 Atttta-aaagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggagg--ggaaacacaatcaccacagcagcagatacaggaaaagtattcgataaaagtcagcacttattcccgtt-aaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatact-------taaaacactggaaacgtttc-cgtaaaatcaggaataaaaccaag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 641413 293 - 1977891 ATTTTA-AAagtacatcatgatcaagctgagtttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggagg--ggaaacacaatcacc---gcagcagatacaggaaaattatttgataaaagtcagcacttattcccgtt-aaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatact-------taaaacactggaaacgtttc-cgtaaaatcaggaataaaaccaag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 496930 296 + 7796314 atttaa-aaagtacattatgatcaagctgaatttaaa-tcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggagc--ggaaacacaatcactgcagcagcagatacaggaaaattatttgataaaagtcagcacttattcccgtt-aaaactcctaccaaactaaaaagagacgttaactctcttaacctgataaacaatgtcagttacaaccccatgtaaacattatact-------taaaacactggaaacgtttc-cgtaaaatcaggaataaaaccaag i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 461508 303 - 608964 attttacaaagtacgttatgatcaagctgagtttaaacccagaaacgcaggatgaaggtaagtctttattgaggtaaatcgcagtataaacagcatggagggagaaaacaccattcta---tcagtagatacc-gaaaggtatttgataaatgtcaacacttattcctgtt-aaaactcctaggaaactaaaaacagaagttaactcccttaacctgataatcaatgtcaataaaaatcc-atgtaaacgccatacttaacagataaaactttgaaaacatttcttttaaaatctgaaataaaaccgag i otoGar3.GL873829 I 279 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=1141680.000000 s hg38.chr3_KI270779v1_alt 175403 241 + 205312 atgccaacaatcactgcttctaatcaacattaggttgaaggttttagctggtgaaataagacgagaaaattaaacaaaaagtatgagagtacagaaatgtgattttgggtatggaagggatgaaacaagcctatggttatttgcagataacataattgtt------tacatagaaacttcccaaacatatacattattagcaaagttctatatccataatcaaaattttaaaaataattgcattcca s panTro5.chr3 200162076 241 + 202621043 atgccaacaatcactgcttctaatcaacattaggttgaaggttttagctggtgaaataagacgagaaaattaaacaaaaagtatgagagtacagaaatgtgattttgggtatgggagggatgaaacaagcctatggttatttgcagataacctaattgtt------tacatagaaaattcccaaacatatacattattagcaaagttctacatccataatcaaaattttaaaaataattgcattcca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 118777 241 + 190779 atgccaacaatcactgcttctaatcaacattaggttgaaggttttagctggtgaaataagacgagaaaattaaacaaaaagtatgagagtacagaaatgtgattttgggtatgggagggatgaaacaagcctatggttatttgcagataacctaattgtt------tacatagaaacttcccaaacatatacattattagcaaagttctacatccataatcaaaattttaaaaataattgcattcca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 9551 247 - 189199 atgccaacaatcattgcttctaatcaacattaggttgaaggttttagctggtgaaataagacaagaaaattaaacaaaaagtatgagagtacagaaatgtgattttgggtatggaagggatgaaacaagcctatggttatttgcagataacataattgttatctgcaacatagaaacttcccaaacatatacattattagcaaagttctacatccataatcaaaattttaaaaataattgcattcca i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202502833 241 + 204787373 atgccaacaatcactgcttctaatcaacattcagttgaaggttttagctggtgaaataagatgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtt------tacatagaaacttcccaaatatataaattattagcaaagttctacatccataatcaaaattttaaaaataattgcattcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 109692 241 + 192460366 atgccaacaatcactgcttctaatcaacattcagttgaaggttttagctggtgaaataagatgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtt------tacatagaaacttcccaaatatataaattattagcaaagttttacatccataatcaaaattttaaaaataattgcattcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 594803 241 + 19675229 atgccaacaatcactgcttctaatcaacattcagttgaaggttttagctggtgaaataagatgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtt------tacatagaaacttcccaaatatataaattattagcaaagttttacatccataatcaaaattttaaaaataattgcattcca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 524910 240 + 16847902 atgccaacaatcactgcttctaatcaacattcggttgaaggttttagctggtgaaataagacgagaaaaataaacgaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtt------tacatagaaacttcccaaacatataaattattagcaaagttttacatccat-atcaaaattttaaaaataattgcattcca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 458242 241 - 91754291 atgccaacaatcactgcttctaatcaacattcggttgaaggttttagctggtgaaataagacgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtt------tacatagaaacttcccaaacatataaattattagcaaagttttacatccataatcaaaatttttaaaataattgcattcca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 641706 241 - 1977891 atgccaacaatcactgcttctaatcaacattcggttgaaggttttagctggtgaaataagacgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtt------tacatagaaacttcccaaacatataaattattagcaaagttttacatccataatcaaaattttaaaaataattgcattcca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 497226 241 + 7796314 atgccaacaatcactgcttctaatcaacattcagttgaaggttttagctggtgaaataagacgagaaaaacaaacaaaaggtatgagagtacacaaatgttattttgggtatggaagggatgaaacaagccgatggttatttgcagataacgtaatcgtt------tacatagaaacttcccaaacatataaattattagcaaagttctacatccatagtcaaaaatttaaaaacaattgcattcca i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 461811 0 - 608964 C e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=510510.000000 s hg38.chr3_KI270779v1_alt 175644 97 + 205312 gctgggtgtggtgat--tcatgcctg-aatcccagtgctttgagaggctgaggcaggagga-acacttgaggccaggagttcaagaccagcctgggtaaca s panTro5.chr3 200162317 98 + 202621043 gctgggcgtggtgat--tcatgcctgcaatcccagggcttcgagaggctgaggcaggagga-acacttgaggccaggagttcaagaccagcctgcgcaaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119018 98 + 190779 gctgggcgtggtgat--tcatgcctgcaatcccagggcttcgagaggctgaggcaggagga-acacttgaggccaggagttcaagaccagcctgcgcaaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 9798 98 - 189199 gctgggcgtggtgat--tcatgcctgtaatcccagtgctttgagaggctgaggcaggagga-acattagaggccaggagttcgagaccagcctaggcaaca i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202503074 98 + 204787373 gctgggtgtggtggt--tcatgcctgtaatcccagtgctttgagaggctgaggcaggagga-acacttgaggccgggcattcgagaccagcctgggcaaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 109933 98 + 192460366 gctgggtgtggtggt--tcatgcctgtaatcccagtgctttgagaggctgaggcaggagga-acacttgaggccaggcattcgagaccagcctgggcaaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 595044 98 + 19675229 gctgggtgtggtggt--tcatgcctgtaatcccagtgctttgagaggctgaggcaggagga-acacttgaggccaggcattcgagaccagcctgggcaaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 525150 98 + 16847902 gctgggtgtggtggt--tcatgcctgtaatcccagtgctttgagaggctgaggcaggagga-acacttgaggccgggcattcgagaccagcctgggcaaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 458483 98 - 91754291 gctgggtgtggtggt--tcatgcctgtaatcccagtgctttgagaggctgagacaggagga-acacttgaggccgggcattcgagaccaacctgggcaaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 641947 98 - 1977891 gctgggtgtggtggt--tcatgcctgtaatcccagtgctttgagaggctgaggcaggagga-acacttgaggccgggcattcgagaccagcctgggcaaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 497467 98 + 7796314 gctgggcgtggtggt--tcatgccggtaatcccagtgctttgagaggctgaggcaggagga-acacttgaggccaggcgttcgagaccagcctgggcaaca i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 461811 99 - 608964 gccaggtgcagtggttctcacacctataatcctaacactctgggaggccaaggcaggaggattcttttgagctcaggagtttgagaccagtctcagcaa-- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e nomLeu3.chr11 120918366 3742 + 123690457 I a score=984206.000000 s hg38.chr3_KI270779v1_alt 175741 198 + 205312 tagcaagatcctgtctctacagaaataaaaaataaaaaaataa---aaaa-ttagctgggcatagtagcacacacatatagttccagctac-tc-agaagttgagg-ggggaggatcacttgagcccaagagttcgaggctgcagtgagctatgatcaccccactgtactccagcctgcatgacagagggagactctgtctc------aaa s panTro5.chr3 200162415 198 + 202621043 tagcaagatcctgtctctacagaaataaaaaataaaaaaataa---aaaa-ttagctgggcatagtagcacacacatatagttccagctac-tc-agaagttgagg-ggggaggatcacttgagcccaagagttcgaggctgcagtgagctatgatcaccccactgtactccagcctgcatgacagagggagactctgtctc------aaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119116 198 + 190779 tagcaagatcctgtctctacagaaataaaaaataaaaaaataa---aaaa-ttagctgggcatagtagcacacacatatagttccagctac-tc-agaagttgagg-ggggaggatcacttgagcccaagagttcgaggctgcagtgagctatgatcaccccactgtactccagcctgcatgacagagggagactctgtctc------aaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 9896 197 - 189199 tagcaagatcctgtctctacagaaat-aaaaataaaaaaataa---aaaa-ttagctgggcatagtagcacacacatatagttccagctac-tc-agaagttgagg-ggggaggatcacttgagcccaagagttcgaggctgcagtgagctatgatcactccactgtactccagcctgcatgacagagggagactctgtctc------aaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922108 174 + 123690457 tagcaaagttctacatccat---aatcaaaattttaaaaataattgcatt-ccAgctgggcatggtggttcatgcctgtaatcccagtgct-ttgagaggctgagg-caggaggaacacttgaggccaggagttcgaga-------------------------------ccagcctgggcaacatagcaagatcctgtctctacagaaat i nomLeu3.chr11 I 3742 C 0 s rheMac8.chr2 202503172 188 + 204787373 tagcaagatcctgtctctacagaaat---------aaaaacga---aaaa--tagttgggcctggtagcacacacatagagttccagcgac-tc-agaggttgatg-gggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgcctc------aaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 110031 188 + 192460366 tagcaagatcctgtctctacagaaat---------aaaaacga---aaaa--tagttgggcctggtagcacacacatagagttccagcgac-tc-agaggttgatg-gggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgcctc------aaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 595142 188 + 19675229 tagcaagatcctgtctctacagaaat---------aaaaacga---aaaa--tagttgggcctggtagcacacacatagtgttccagcgac-tc-agaggttgatg-gggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgcctc------aaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 525248 188 + 16847902 tagcaagatcctgtctctacagaaat---------aaaaacga---aaaa--tagctgggcccggtagcacacacatagagttccagcgac-tc-agaggttgatg-gggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgcctc------aaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 458581 188 - 91754291 tagcaagatcctgtctctacagaaat---------aaaaacaa---aaaa--tagctgggcccagtagcacacacatagagttccagcgac-tc-agaggttgatg-gggaaggagcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgcctc------aaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 642045 188 - 1977891 tagcaagatcctgtctctacagaaat---------aaaaacga---aaaa--tagctgggcccggtagcacacacatagagttccagcgac-tc-agaggttgatg-gggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgcctc------aaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 497565 188 + 7796314 tagcaagatcctgtctctacagaaat---------aaaaacta---aaaa--tagctgggcccggtagcacacacacagagttccagcgac-tc-agagcttgatg-gggaagggtcgcttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgacagagggagactctgtctc------aaa i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 461910 201 - 608964 gagtgagacccaatctctactgaaaaagaaaagaaaagaaaag---aaaacctagtgaggtgtggtggcacacacctgtagtcccagttacatg-ggaggctgaggcaagaaagaccacttgagcccaggggtttgaggttgcattgaactagactgatgccatgacactctagcctgggcaacagagtaagattctgtttt------aaa i otoGar3.GL873829 C 0 I 131 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1067254.000000 s hg38.chr3_KI270779v1_alt 175939 179 + 205312 -aagag-------------atttaaaaacaaaa-----------t-----------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgacc-aaaaaaagtacataaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaa s panTro5.chr3 200162613 179 + 202621043 -aaaag-------------atttaaaaacaaaa-----------t-----------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgacc-aaaaaaagtacataaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119314 179 + 190779 -aaaag-------------atttaaaaacaaaa-----------t-----------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgacc-aaaaaaagtacataaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10093 179 - 189199 -aaaag-------------atttaaaaacaaaa-----------t-----------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaagtatttttaagactatagtgtttatgatggtgacc-aaaaaaagtacataaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922282 190 + 123690457 -aaaaa-------------ataaaaaaataaaAAATTAGCTGGGC-----------------------------------------------------ATGGTAgcactcctatatatcagtgaaac-agaaaatatttttaagactatagtgtttatgatagtgacc-aaaaaaagtacgtaaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202503360 185 + 204787373 -acaag-------------attaaaaaacaaac-----------aa------------------------------------------------aaaaaaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataaatctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatacgccaaagaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 110219 185 + 192460366 -acaag-------------attaaaaaacaaaa-----------aa------------------------------------------------aaacaaaactgcattcctatatatcagtgaaag-agaaaatatttttaattctatagtgtttatgatggtgaccaaaaaaaagtacataaaaataaatctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 595330 181 + 19675229 -acaag-------------attaaaaaacaaaa-----------aa----------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataaatctaacaaaaaacgtgcttcatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 525436 179 + 16847902 -acaag-------------attaaaaaacaaaa-----------------------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataaatctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 458769 179 - 91754291 -acaag-------------attaaaaaacaaaa-----------------------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataagtctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 642233 179 - 1977891 -acaag-------------attaaaaaacaaaa-----------------------------------------------------------------aaaactgcattcctatatatcagtgaaag-agaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataagtctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 497753 180 + 7796314 -acgag-------------attaaaaaacaaaa-----------c-----------------------------------------------------aaaactgcattcctatatgtcagtgaaag-agaaaatatttttaagactgtagtgtttattatggtgaccaaaaaaaagtacataaaaataaatctaacaaaagacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccagagaaa i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 462242 247 - 608964 aagaaacagacctgtgattatttgcaaataata-----------tacttgcttacatagaaaccagcaaagttctgtgtaacggtcaaaattttaaaaataactgcattcctatacatcaatgcaagaaaaaaatatttttaaaactgtagtgtttatgatggtgacc-cccaaaagtgcttaagaataaatctaagaaaagatgtgcttaatctttatggacagaattatataactttattgaaaaatttcaaagaag i otoGar3.GL873829 I 131 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=679968.000000 s hg38.chr3_KI270779v1_alt 176118 121 + 205312 acacacataCTGGTTACGTGCATTTGGGAACATT--TATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCttccttccaggatgtttttatgctttaaaaaatatatagttt s panTro5.chr3 200162792 121 + 202621043 acacacataCTGGTTACGTGCATTTGGGAACATT--TATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCTTCCTTCCAGGATGTTTTTATGCTTTAAAAAATATATAGTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119493 121 + 190779 acacacataCTGGTTACGTGCATTTGGGAACATT--TATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCTTCCTTCCAGGATGTTTTTATGCTTTAAAAAATATATAGTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10272 121 - 189199 acacacataCTGGTTACGTGCATTTGGGAACATT--TATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAGTGTTTCCTTCCAGGATGTTTTTATGCTTTAAAAAATATATAGTTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922472 123 + 123690457 acacacataCTGGTTACGTGCATTTGGGAACATTGAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCttccttccaggatgtttttatgctttaaaaaatatacagttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202503545 123 + 204787373 acacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACTAGATAACACTTCCTTCTAGGATTTTTTTGTGCTTTAAAAAATATATAGTTT i rheMac8.chr2 C 0 I 13 s macFas5.chr2 110404 123 + 192460366 acacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGATAACGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATATAGTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 595511 123 + 19675229 acacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACTAGATAACGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATATAGTTT i macNem1.NW_012014355v1 C 0 I 8 s cerAty1.NW_012004056v1 525615 123 + 16847902 acacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGCTGAAAGATCAAAACCCATAATCTTGCTACTAGATAAGGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATATAGTTT i cerAty1.NW_012004056v1 C 0 I 8 s chlSab2.chr15 458948 123 - 91754291 acacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTTTTGCTAGATAAGGCTTCCTTCTAGGATTTTTTTATGCTTTAaaaaatatatagttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 642412 123 - 1977891 acacacataCTAGTTACGTGCATTTGGGAACATTCAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACTAGATAAGGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATATAGTTT i manLeu1.NW_012102020v1 C 0 I 8 s colAng1.NW_012118932v1 497933 123 + 7796314 acacacataCTGGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTACTACTAGACAAGGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATCTAGTTT i colAng1.NW_012118932v1 C 0 I 4 e otoGar3.GL873829 462489 0 - 608964 C e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=295.000000 s hg38.chr3_KI270779v1_alt 176239 1 + 205312 a s panTro5.chr3 200162913 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119614 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10393 1 - 189199 A i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922595 1 + 123690457 a i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110527 1 + 192460366 T i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 462489 0 - 608964 C e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 595634 8 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 498056 4 + 7796314 I e manLeu1.NW_012102020v1 642535 8 - 1977891 I e chlSab2.chr15 459071 0 - 91754291 C e cerAty1.NW_012004056v1 525738 8 + 16847902 I e rheMac8.chr2 202503668 13 + 204787373 I a score=14176.000000 s hg38.chr3_KI270779v1_alt 176240 6 + 205312 ggccag s panTro5.chr3 200162914 6 + 202621043 ggccag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119615 6 + 190779 ggccag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10394 6 - 189199 ggccag i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922596 6 + 123690457 ggccgg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110528 6 + 192460366 AGCCAG i macFas5.chr2 C 0 I 1 s chlSab2.chr15 459071 6 - 91754291 ggccgg i chlSab2.chr15 C 0 C 0 s otoGar3.GL873829 462489 6 - 608964 ggccag i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 595634 8 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 498056 4 + 7796314 I e manLeu1.NW_012102020v1 642535 8 - 1977891 I e cerAty1.NW_012004056v1 525738 8 + 16847902 I e rheMac8.chr2 202503668 13 + 204787373 I a score=74733.000000 s hg38.chr3_KI270779v1_alt 176246 46 + 205312 gagtggtggctcacacctgtaatcccagcgctttgtgaggctgagg s panTro5.chr3 200162920 46 + 202621043 gcgcggtggctcacacctgtaatcccagcgctttgtgaggctgagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119621 46 + 190779 gcgcggtggctcacacctgtaatcccagcgctttgtgaggctgagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10400 46 - 189199 gcgcggtggctcacacctgtaatcccagcgctttgtgaggctgagg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922602 46 + 123690457 gcgtggtggctcacacctgtaatcccagcactttgtgaggctgagg i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 459077 46 - 91754291 gcgcggtggctcacgcctgtaatcccagcactttgggaggccgagg i chlSab2.chr15 C 0 I 166 s otoGar3.GL873829 462495 45 - 608964 gtacagtggctcacacctgtaaccctagcaatctgggaggccagg- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 595634 8 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 498056 4 + 7796314 I e manLeu1.NW_012102020v1 642535 8 - 1977891 I e cerAty1.NW_012004056v1 525738 8 + 16847902 I e macFas5.chr2 110534 1 + 192460366 I e rheMac8.chr2 202503668 13 + 204787373 I a score=99791.000000 s hg38.chr3_KI270779v1_alt 176292 98 + 205312 tgggcggatca--tgaggtcaggagatcgagaccatcctggctaacagggcga-acccccgtctctactaaaaatacaaaaaaattagccgggcgtggtgg s panTro5.chr3 200162966 98 + 202621043 tgggcggatca--tgaggtcaggagatcgagaccatcctggctaacacggtga-acccccgtctctactaaaaatacaaaaaaattagccgggcgtggtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119667 98 + 190779 tgggcggatca--tgaggtcaggagatcgagaccatcctggctaacacggtga-acccccgtctctactaaaaatacaaaaaaattagccgggcgtggtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10446 98 - 189199 tgggcggatca--tgaggtcaggagatcgagactatcctggctaacacggtga-acccccgtctctactaaaaatacaaaaaaattagccaggcgtggtgg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922648 98 + 123690457 tgcgcggatca--tgaggtcaggagattgagaccatcctggctaacacggtga-aaccccatctctactaaaaatacaaaaaaattagccgggcatggtgg i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 462540 87 - 608964 caggaggatcccttaagctcacgagttcaagaccagcctgagcaaga--gtgagacccccatctct------------aaaaaaatagctgggcattatgg i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 595634 8 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e colAng1.NW_012118932v1 498056 4 + 7796314 I e manLeu1.NW_012102020v1 642535 8 - 1977891 I e chlSab2.chr15 459123 166 - 91754291 I e cerAty1.NW_012004056v1 525738 8 + 16847902 I e macFas5.chr2 110534 1 + 192460366 I e rheMac8.chr2 202503668 13 + 204787373 I a score=6828.000000 s hg38.chr3_KI270779v1_alt 176390 4 + 205312 cggg s panTro5.chr3 200163064 4 + 202621043 cggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119765 4 + 190779 cggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10544 4 - 189199 cggg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922746 4 + 123690457 cggg i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 498060 4 + 7796314 cggg i colAng1.NW_012118932v1 I 4 C 0 s otoGar3.GL873829 462627 4 - 608964 tgag i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 595634 8 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 642535 8 - 1977891 I e chlSab2.chr15 459123 166 - 91754291 I e cerAty1.NW_012004056v1 525738 8 + 16847902 I e macFas5.chr2 110534 1 + 192460366 I e rheMac8.chr2 202503668 13 + 204787373 I a score=53810.000000 s hg38.chr3_KI270779v1_alt 176394 12 + 205312 cgcctgtagtcc s panTro5.chr3 200163068 12 + 202621043 tgcctgtagtcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119769 12 + 190779 tgcctgtagtcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10548 12 - 189199 cgcctgtagtcc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922750 12 + 123690457 tgcctgtagtcc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110535 12 + 192460366 cgcctgtggtcc i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 595642 12 + 19675229 cgcctgtggtcc i macNem1.NW_012014355v1 I 8 C 0 s cerAty1.NW_012004056v1 525746 12 + 16847902 cgcctgtggtcc i cerAty1.NW_012004056v1 I 8 C 0 s manLeu1.NW_012102020v1 642543 12 - 1977891 cgcctgtggtcc i manLeu1.NW_012102020v1 I 8 C 0 s colAng1.NW_012118932v1 498064 12 + 7796314 cacctgtagtcc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 462631 12 - 608964 cacctatagtcc i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e chlSab2.chr15 459123 166 - 91754291 I e rheMac8.chr2 202503668 13 + 204787373 I a score=601128.000000 s hg38.chr3_KI270779v1_alt 176406 124 + 205312 cagctactcgggaggctgaggcaggagaatggcgtgaacccggggaggcggagcttgcagtgagccgagattgcaccactgcactcct-gcctgggtgacagagtgagactccgtctcaaaaaaa s panTro5.chr3 200163080 123 + 202621043 cagctactcgggaggctgaggcaggagaatggcgtgaacccggg-aggtggagcttgcagtgagccgagattgcaccactgcactccc-gcctgggcgacagagtgagactctgtctcaaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119781 123 + 190779 cagctactcgggaggctgaggcaggagaatggcgtgaacccagg-aggtggagcttgcagtgagccgagattgcaccactgcactccc-gcctgggcgacagagtgagactccgtctacaaaaaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10560 123 - 189199 cagctactcgggaggctgaggcaggagaatggcgtgaacccggg-aggcggagcttgcagtgagccgagattgcaccactgcactccc-gcctgggcgacagagtgagactccgtctcaaaaaaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922762 121 + 123690457 cagctactcaggaggctgaggcaggagaatggcgtgaacccagg-aggcggagcttgcagtgagccaagatcgcaccactgcactcca-gcctgggtgac--agtgagactccgtctccaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202503681 121 + 204787373 cagcgactcgggaggctgaggcaggagaacggcgtgaactcgga-aggcggagcttgcagtgagcc-agatcgcgccactacactcca-g-ctgggtgacagagtgagactccgtctcaaaaaaa i rheMac8.chr2 I 13 I 39 s macFas5.chr2 110547 121 + 192460366 cagcgactcgggaggctgaggcaggagaacggcgtgaactcgga-aggcggagcttgcagtgagcc-agatcgcgccactgcactcca-g-ctgggtgacagagtgagactccgtctcaaaaaaa i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 595654 121 + 19675229 cagcgactcgggaggctgaggcaggagaacggcgtgaactcgga-aggcggagcttgcagtgagcc-agatcgcgccactgcactcca-g-ctgggtgacagagtgagactccgtctcaaaaaaa i macNem1.NW_012014355v1 C 0 I 39 s cerAty1.NW_012004056v1 525758 121 + 16847902 cagcgactcgggaggctgaggcaggagaacggcgtgaactcgga-aggcggagcttgcagtgagcc-agatcgcgccactgcattcca-g-ctgggtgacagagtgagactccgtctcaaaaaaa i cerAty1.NW_012004056v1 C 0 I 51 s manLeu1.NW_012102020v1 642555 122 - 1977891 cagcgactcgggaggctgaggcaggagaacggcgtgaactcgga-aggcggagcttgcagtgagcc-agatcgcgccactgcactccagg-ctgggcgacagagtgagactccgtctcaaaaaaa i manLeu1.NW_012102020v1 C 0 I 51 s colAng1.NW_012118932v1 498076 122 + 7796314 cagctactccggaggctgaggcaggagaacggcctgaactcgga-aggcggagcttgcagtgagcc-agatcgcgccactgcactcca-gcctgagcgacagagtgagactccgtctcaaaacaa i colAng1.NW_012118932v1 C 0 I 8 s otoGar3.GL873829 462643 119 - 608964 -agctactcaggatgctgaggcaagagaaccacttgagcccaaa-agtttgaagttgctgtgagctgtgat---gccatggcactcta-ccaagggtgacaaagtgagactctgtccaaaaaaaa i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e chlSab2.chr15 459123 166 - 91754291 I a score=3014.000000 s hg38.chr3_KI270779v1_alt 176530 18 + 205312 aaa------ttaaaaattaaaaaa----- s panTro5.chr3 200163203 24 + 202621043 aaaaaaaaattaaaaattaaaaaa----- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119904 22 + 190779 aaa--aaaattaaaaattaaaaaa----- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10683 21 - 189199 aaa--aaaattaaaaatt-aaaaa----- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922883 18 + 123690457 aaa-----attaaaaatt-aaaaa----- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110670 18 + 192460366 ------aaaataaaaacagaaaca----- i macFas5.chr2 I 2 I 19 s colAng1.NW_012118932v1 498206 18 + 7796314 ------aaaacaaaaACatatata----- i colAng1.NW_012118932v1 I 8 I 10 s otoGar3.GL873829 462762 22 - 608964 -------aaatatatatatatatataaaa i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 595775 39 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I e manLeu1.NW_012102020v1 642677 51 - 1977891 I e chlSab2.chr15 459123 166 - 91754291 I e cerAty1.NW_012004056v1 525879 51 + 16847902 I e rheMac8.chr2 202503802 39 + 204787373 I a score=35628.000000 s hg38.chr3_KI270779v1_alt 176548 6 + 205312 tatata s panTro5.chr3 200163227 6 + 202621043 TATATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119926 6 + 190779 TATATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10704 6 - 189199 TATATA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922901 6 + 123690457 aataca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202503841 6 + 204787373 TATATA i rheMac8.chr2 I 39 C 0 s macFas5.chr2 110707 6 + 192460366 TATATA i macFas5.chr2 I 19 C 0 s macNem1.NW_012014355v1 595814 6 + 19675229 tgtgtA i macNem1.NW_012014355v1 I 39 C 0 s cerAty1.NW_012004056v1 525930 6 + 16847902 tatata i cerAty1.NW_012004056v1 I 51 C 0 s chlSab2.chr15 459289 6 - 91754291 tatATA i chlSab2.chr15 I 166 C 0 s manLeu1.NW_012102020v1 642728 6 - 1977891 tATATA i manLeu1.NW_012102020v1 I 51 C 0 s colAng1.NW_012118932v1 498234 6 + 7796314 tatata i colAng1.NW_012118932v1 I 10 C 0 s otoGar3.GL873829 462784 6 - 608964 tatata i otoGar3.GL873829 C 0 I 160 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=2204287.000000 s hg38.chr3_KI270779v1_alt 176554 384 + 205312 tgtatagtttaacttattcagtatacataa-------------------------------ttttgtatcctgcctttttagccatacctgata---tgagcatttcttcaagatactagcttc-gtaaacatAGCCTGAGAAGACGCACATCTTTTATGTCTT---GGATGGCAG---TTCCTTGCTTCCC-CCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGGACTGGGAGAGCTCAGCTCCATAGTAAAATCTAGGGTGCTGTATAAAAACTCCCCCTGCTGAGCTCTGGTGGCC-TCCTTCC-TAACAAA--GCCACTCCCCCAACTGGAAGCG---------TTGTTACCCTTCCCATTTTCTGTTAAACAGGAG--------------CAGGTCTCTCTCCTGTACCACATCCTGCTGTG-TGTCC-ACCATACCCACCTCTCTGTG--- s panTro5.chr3 200163233 384 + 202621043 CGTATAGTTTAACTTATTCTGTATACATAA-------------------------------TTTTGTATCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTC-ATAAACATAGCCTGAGAAGACGCACATCTTTTATGTCTT---GGATGGCAG---TTCCTTGCTTCCC-CCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGGACTGGGAGAGCTCAGCTCCATAGTAAAATCTAGGGTGCTGTATAAAAACTCCCCCTGCTGAGCTCTGGTGGCC-TCCTTCC-TAACAAA--GCCACTCCCCCAACTGGAAGGG---------TTGTTACCCTTCCCATTTTCTGTTAAACCGGAG--------------CAGGTCTCTCTCCTGTACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 119932 384 + 190779 CGTATAGTTTAACTTATTCTGTATACATAA-------------------------------TTTTGTATCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTC-ATAAACATAGCCTGAGAAGACGCACATCTTTTATGTCTT---GGATGGCAG---TTCCTTGCTTCCC-CCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGGACTGGGAGAGCTCAGCTCCATAGTAAAATCTAGGGTGCTGTATAAAAACTCCCCCTGCTGAGCTCTGGTGGCC-TCCTTCC-TAACAAA--GCCACTCCCCCAACTGGAAGGG---------TTGTTACCCTTCCCATTTTCTGTTAAACAGGAG--------------CAGGTCTCTCTCCTGTACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 10710 384 - 189199 TGTGTAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTATCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTC-GTAAACATAGCCTGAGAACACGCACATCTTTTATGTCTT---GGATGGCAG---TTCCTTGCTTCCC-CCTTTTGGAGTCCTATAAGA-GCTGGCTCAGGGGGACTGGGAGAGCTCAGCTCCATAGTAAAATCTAGAGTGCTGTATAAAAACTCCCCCTGCTGAGCTCTGGTGGCC-TCCTTCC-TAACAAA--GCCACTGCCCCAACTGGAAGCG---------TTGTTACCCTTCCCATTTTCTGTTAAACAGGAG--------------CAGGTATCTCTCCTGTACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120922907 382 + 123690457 tatatagtgtaacttattcagtatacgtaa-------------------------------ttttatatcctgcctttttagccatacctgata---tgagcatttcttcaagatactagcttc-ataaacatAGCCTGAGAAGAGGCACATCTTTTATGTCTT---GGATGGCAG---TTCCTTGCTTCCC-TCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGGACTGGGAGTGCTCAGCTCCACAGTAAAATCTAGGGTGCTGTATAAAAACT--CCCTGCTGAGCTCTGGTGGCC-TCCTTCC-TAACAAA--GCCACTCCCCCAACTGGAAGCA---------TTGTTACCCTTCCCATTTTCCGTTAAACAGGAG--------------CAGGTCTCTCTCCTGGACCATATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202503847 380 + 204787373 TATATAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTT-GTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTC---GGATGGCAG---TTCCTTGCTTCCC-CGTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGG-CTGGGAGAGCTCCGCTCCGCAGCAAAATCTAGGGTGCTGTATAAAACTC--CCCCGCTGAGCTCTCGTGGCT-TCCTTCC-TAACAAA--GCCACTTCCCC-ACTGGAAGCG---------CTGTTACCATTCCCATTTCCCCTTCAACAGGCG--------------CAGGTCTCTCTCCTGGACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 110713 380 + 192460366 TATATAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTT-GTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTC---GGATGGCAG---TTCCTTGCTTCCC-CGTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGG-CTGGGAGAGCTCCGCTCCGCAGGAAAATCTAGGGTGCTGTGTAAAACTC--CCCCGCTGAGCTCTGGTGGCT-TCCTTCC-TAACAAA--GCCACTTCCCC-ACTGGAAGCG---------CTGTTACCATTCCCATTTCCCCTTCAACAGGCG--------------CAGGTCTCTCTCCTGGACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 595820 394 + 19675229 TATATAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTT-GTAAACACAGCCCGAGAAGAGGCACATCTTTTATGTCTTCGGGATTGGCAGGTTTTCCTTGCTTCCCGTTTTTTGGAGTCCTGCAAGAGGCTGGCTCA-GGGG-CTGGGAGAGCTCCGCTCCGCAGGAAAATCTA-GGTGCTTGGTAAAACT----CCCGCTGAGCTCTTGGTGCT-TCCTTCCTTAACAAAGCGCCACTTCCCC-ACTGGAAGCGGGCTGGTGTTCGTTACCATTCC--GTTTCCCTTCAACAGGTG--------------CA-GTCTCTCTCCTGGACCACATCCTGCTGTGTTGTCC-ACCGTACCCACCTCTCTGTG--- i macNem1.NW_012014355v1 C 0 I 495 s cerAty1.NW_012004056v1 525936 380 + 16847902 tatataGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCTATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTT-GTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTC---GGATGGCAG---CTCCTTGCTTCCC-CCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGG-CTGGGAGAGCTCAGCTCCGCAGTAAAATCTAGGGTGCTGTATAAAACTC--CCCGGCTGAGCTCTGGTGGCT-TCCTTCC-TAACAAA--GCCACTTCCCC-ACTGGAAGCG---------CTGTTACCATTCCCATTTCCCCTTCAACAGGCG--------------CAGGTCTCTCTCCTGGACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 459295 380 - 91754291 TATATAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCTATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTT-GTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTT---GGATCGCAG---TTCCTTGCTTCCC-CCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGG-CTGGGAGAGCTCAGCTCCGCAGTAAAATCTAGGGTGCTGTATAAAACTC--CCCTGCTGAGCTCTGGTGGCT-TCCTTCC-TAACGAA--GCCATTTCCCC-ACTGGAAGTG---------CTGTTACCATTCCCATTTCCCCTTCAACAGGCG--------------CAGGTCTCTCTCCTGGACCACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 642734 380 - 1977891 TATATAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATAGTAGCTTT-GTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTC---GGATGGCAG---CTCCTTGCTTCCC-CCTTTTGGAGTCCTACAAGA-GCTGGCTCAGGGGG-CTGGGAGAGCTCAGCTCCGCAGTAAAATCTAGGGTGCTGTATAAAACTC--CCCCGCTGAGCTCTGGTGGCT-TCCTTCC-TAACAAA--GCCACTTCCCC-ACTGGAAGCG---------CTGTTACCATTCCCATTTCCCCTTCAACAGGCG--------------CAGGTCTCTCTCCTGGACTACATCCTGCTGTG-TGTCC-ACCGTACCCACCTCTCTGTG--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 498240 378 + 7796314 tatGTAGTTTAACTTATTCAGTATACATAA-------------------------------TTTTGTGTCCTGCCTTTTTAGCCATACCTGATA---TGAGCATTTCTTCAAGATACTAGCTTT-GTAAACATAGCCCCAGAAGAGGCACATCTTTTATGTCTT---GGACGGCAG---TTCCTTGCTTCCC-CCTTTTGGAGTCCTACAGGA-GCTGGCTCAGGGGG-CTGGGGGAGCTCAGCTCCACAGGAAAATCTCGGGTGCTGTGTAAAACTC--CCCTGCTGAGCTCTAGTGGCT-TCCTTCC-TAACAGA--GCCATTTCCCC-ACTGGAAGCG---------CTGTCACCATTCCCATTTCCCCTTCAACAGGAG--------------CAGGTCTCTCTCCTGGACCACCTCCTGCTGTG-TGTCT-ACTGTACCCACCTCTGTG----- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 462950 441 - 608964 tgcatagtttaacttacccagtctatataatttgtatcctgctttattttttaatgttcatttttataccctgcctgattagctttacctgatatcgtgagcatttcttcatgtggttatttttggtaaacatAGCCTGAGAAGAGACACATCTTTTG-GTCTT---GGGTGGTAG---TCATTTTCCCTGC-CCCTTTGGAGTCCTGGAGGA-ACCCGTTCAAGGGGACCAGGAGAGCTTAGCCCAACAGTGAGATGTTGAGTACTGCACAAAACCTCCCCTTGCTGAGCTCTGGAGGCTACCCTTCC-TAATAAA--GCCATTCCCTCAACTAGGAACA-----TTAATTGTTACCATCCCCACATCCCCATAAATAGGAGATGTGGCCCAGGGATTGGTCCTTCTCCTGGAGCATGTCCTGGAGTG-CATCTGGCTGTACCCACCTCTCTGTGCTG i otoGar3.GL873829 I 160 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=516498.000000 s hg38.chr3_KI270779v1_alt 176938 153 + 205312 CAATGAGAGCTCGGGG-GTCATGTGGACTCCACTGCTCC-CTGCTCGC-AATTTCTCCTTAATACATCTTACTTTATGCCCGTTC--------TGTGTGTTGCTAGTATGTATGTGTGACACtgtgtgtgtgtgtg------------------------------------------------------------------------------tg--------tgtgtgtgtgtgtgtgACACTGTGTG s panTro5.chr3 200163617 147 + 202621043 CAATGAGAGCTCGGGG-GTCATGTGGACTCCACTGCTCC-CTGCTCAC-AATTTCTCCTTAATACATCTTACTTTATGCCCGTTC--------TGTGTGTTGCTAGTATGTATGTGTGACACtgtgtgtgtgtgtg------------------------------------------------------------------------------tg--------acactgtgtgtgtgtg------tgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120316 155 + 190779 CAATGAGAGCTCGGGG-GTCATGTGGACTCCACTGCTCC-CTGCTCAC-AATTTCTCCTTAATACATCTTACTTTATGCCCGTTC--------TGTGTGTTGCTAGTATGTATGTGTGACACtgtgtgtgtgtgtg------------------------------------------------------------------------------tgtgtgtgacactgtgtgtgtgtgtg------tgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11094 149 - 189199 CAATGAGAGCTCGGGG-GTCATGTGGACTCCACTGCTCC-CTGCTCAC-AATTTCTCCTTAATACATCTTACTTTATGCCCGTTC--------TGTGTGTTGCTAGTATGTATGTGTGACACtgtgtgtgtgtgtg------------------------------------------------------------------------------tgtgtg----acattgtgtgtgtg--------tgtg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120923289 121 + 123690457 TGATGAGAGCTTGGGG-GTCATGTGGACTCCACTGCTCC-CTGCTCGC-AATTTCTCCTTAATATGTCTTACTTTATGCCCATTC----------TGTGTTGCTAGTATGTATGTGCGACACtgtgtgtg--------------------------------------------------------------------------------------------------------------------tgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202504227 153 + 204787373 CGATGAGAGCTCAGAG-GCCACGTGGACTCCACCGCCTC-CTGCTCGC-AATGTCTCCTTAACACATCTTACTTTATGCCCGTTCtgtgtgtttgtgtgttgct--tatgtatgtgtgacactgtgtgtgtgtgtg--------------------------------------------------------------------------------------------tctgtgtgtgtgacactgtgtg i rheMac8.chr2 C 0 I 462 s macFas5.chr2 111093 157 + 192460366 CGATGAGAGCTCAGAG-GCCACGTGGACTCCACCGCCTC-CTGCTCGC-AATGTCTCCTTAACACATCTTACTTTATGCCCGTTCTTTGTGTTTGTGTGTTGCT--TATGTATGTGTGACACtgtgtgtgtgtgtg----------------------------------------------------------------------------------------tgtctgtgtgtgtgtgacactgtgtg i macFas5.chr2 C 0 I 379 s cerAty1.NW_012004056v1 526316 227 + 16847902 CGATGAGAGCTCAGAG-GCCACGTGGACTCCACCGCTTA-CTGCTCGC-AATGTCTCCTTAACACATCTTACTTTATGCCCGTTCtgtgtgtttgtgtgttgct--tatgtatgtgtgacactgtgtgtgtgtgtgtgtgacactgtgtgtgtgtg----------------tgtgtgtcactgtgtgtatgtctgtgtgtgtgtgacac--tgtgtgtgtgtgtgtctgtgtgtgtgtgacactgtgtg i cerAty1.NW_012004056v1 C 0 I 18 s chlSab2.chr15 459675 161 - 91754291 CGATGAGA----------CCACGTGGACTCCACCGCTTC-CTGCTCGC-AACATCTCCTTAACACATCTTCCTTTATGCCCGTTCtgtgtgtttgtgtgttgctagtatgtatgtgtgacactgtgt-------------------------------------------------------------------------tgtgtgacac----tgtgtgtgtgtgtctgtgtgtgtgtgacactgtgtg i chlSab2.chr15 C 0 I 134 s manLeu1.NW_012102020v1 643114 223 - 1977891 CGATGAGAGCTCAGAG-GCCACGTGGACTCCACCGCTTA-CTGCTCAC-AATGTCTCCTTAACACATCTTACTTTATGCCCGTTCtgtgtgtttgtgtgttgct--tatgtatgtgtgacactgtgtgtgtgtgtg----acactgtgtgtgtgtgtgtgtcactgtatgtatg------------------tctgtgtgtgtgtgacactgtgtgtgtgtgtgtgtctgtgtgtgtgtgacactgtgtg i manLeu1.NW_012102020v1 C 0 I 10 s colAng1.NW_012118932v1 498618 145 + 7796314 CGATGAGAGCTCCGAG-GCCATGTGGACTCCACCGCTTC-CTGCTCGC-AATGTCTCCTTAACACATCTTACTTTATGCCCGTTCtgtgtgtctgtgtgttgctagtatgtatgtgtgacactgtgtgtgtgtgtg------------------------------------------------------------------------------------------------tgtgtgtggttc------ i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 463391 130 - 608964 CAATGAGAGCTGGGGGAGGCTGGTGCATTCTGCTGCTTCTCTGCTTGCGAGTTTTTCCTTAACAAACCTTACTTTAT----------------TCTG-GTTGCTAGTATGTTCgtgtga----gtgtgtgtgtgtg----------------------------------------------------------------------------------------------tatgtgtgtgCCCCT----- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 596214 495 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=46465.000000 s hg38.chr3_KI270779v1_alt 177091 10 + 205312 TGTGTGTCCC s panTro5.chr3 200163764 10 + 202621043 tgtgtgtCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120471 10 + 190779 tgtgtgtCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11243 10 - 189199 tgtgtgtCCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120923410 10 + 123690457 tgtgtgtCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202504842 10 + 204787373 tgtgtgtCCA i rheMac8.chr2 I 462 C 0 s macFas5.chr2 111629 10 + 192460366 tgtgtgtcCA i macFas5.chr2 I 379 C 0 s cerAty1.NW_012004056v1 526561 10 + 16847902 tgtgtgtCCA i cerAty1.NW_012004056v1 I 18 C 0 s chlSab2.chr15 459970 10 - 91754291 tgtgtgtcca i chlSab2.chr15 I 134 C 0 s manLeu1.NW_012102020v1 643347 10 - 1977891 tgtgtgtcca i manLeu1.NW_012102020v1 I 10 C 0 s colAng1.NW_012118932v1 498763 10 + 7796314 tgtgtgtCCA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 463521 0 - 608964 C e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 596214 495 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=398728.000000 s hg38.chr3_KI270779v1_alt 177101 71 + 205312 TGCCCTTATGGAACATTGGACATAG-CCTTTAAACAtttttttttccagatggagtttcactcttgttgccc s panTro5.chr3 200163774 71 + 202621043 TGCCCTTATGGAACATTGGACATAG-CCTTTAAACAtttttttttccagatggagtttcactcttgttgccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120481 71 + 190779 TGCCCTTATGGAACATTGGACATAG-CCTTTAAACAtttttttttccagatggagtttcactcttgttgccc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11253 70 - 189199 TGCCCTTATGGAACATTGGACATAA-CCTTTAAACA-ttttttttccagatggagtttcactcttgttgccc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120923420 71 + 123690457 TTCCCTTATGGAACACTGGACATAG-CCTTTAAACAtttttttttccagatggagtttcgctcttcttgcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202504852 70 + 204787373 TGCCCTTATGGAATAGTGGACATAG-CCTTTAAACA-ttttttttccagatggagtttcgctcttgttgccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 111639 70 + 192460366 TGCCCTTATGGAATAGTGGACATAG-CCTTTAAACA-ttttttttccagatggagtttcgctcttgttgccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 596709 70 + 19675229 TGCCCTTAAGGAATAGTGGACATAG-CCTTTAAACA-ttttttttccagatggagtttcgctcttgttgccc i macNem1.NW_012014355v1 I 495 I 1052 s cerAty1.NW_012004056v1 526571 70 + 16847902 TGCCCTTATGGAATAGTGGACATAG-CCTTTAAACA-ttttttttccagatggagtttcgctcttgttgccc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 459980 71 - 91754291 ttcccttacggaATATTGGACATAG-CCTTTAAACAtttttttttccagatggagtttcgctcttgttgccc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 643357 70 - 1977891 tgcccttatggaatAGTGGACATAG-CCTTTAAACA-ttttttttccagatggagtttcgctcttgttgccc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 498773 71 + 7796314 TGCCCTTATGCAATATTGGACATAGCCCTTTAAACA-ttttttttccagatggagtttcgctcttgttgccc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 463521 48 - 608964 --------------ATCAGACATAG-CCt--------tttttttttgagacagagcctcaagc-tgtcaccc i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=2385960.000000 s hg38.chr3_KI270779v1_alt 177172 478 + 205312 aggctggagtgcaacggcacgatttcggcccactgcaacctccacctcc---------gtgattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccatgccaggctaattttttg-------------tatttttagtggagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatccactcacctcagcctcccaaagtgctgggattacaggcg------------------------------------tgagcca------ccgcgcccggcc--TAAAcactaaataataagccatcatagagaaagctcatattgttaacttactgttggacaattaggatatttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtctaatgttttg--tttacattatttcagctcatctccttaacataaatttctatcagtggaattgctggtttatgccgttataaaatttttcatgttattaatacag----actg s panTro5.chr3 200163845 478 + 202621043 aggctggagtgcaacggcacgatttcggcccactgcaacctccgcctcc---------gtgattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccatgccaggctaattttttg-------------tatttttactggagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatccactcacctcaacctcccaaagtgctgggattacaggcg------------------------------------tgagcca------ccgcacctggcc--TAAACACTAAATAATAAGCCATCATAGAGAAAGCTCATATTGTTAActtattgttagacaattagggtatttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtatgatgttttg--tttacattatttcagctcatctccttaacataaatttctatcagtggaattgctggtttatgctgttataaaatttttcatgttattaatacag----actg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 120552 478 + 190779 aggctggagtgcaacggcacgatttcggcccactgcaacctccgcctcc---------gtgattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccatgccaggctaattttttg-------------tatttttagtgaagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatccactcacctcaacctcccaaagtgctgggattacaggcg------------------------------------tgagcca------ccgcgcctggcc--TAAACACTAAATAATAAGCCATCATAGAGAAAGCTCATATTGTTAActtattgttagacaattaggatatttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtatgatgttttg--tttacattatttcagctcatctccttaacataaatttctatcagtggaattgctggtttatgctgttataaaatttttcatgttattaatacag----actg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11323 478 - 189199 aggctggagtgcaacggcacgatttcggcccactgcaacctccgcctcc---------gtgattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccatgccaggctaattttttg-------------tatttttagtggagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatccactcacctcagcctcccaaagtgctgggattacaggtg------------------------------------tgagcca------ccgtgcccagcc--TAAACActaaataataagccatcatagagaaagctcatattgttaacttactgttggacaattaggatatttccaatgtattgcttattttaaataaagccctgatgactatcttcatgtataatgttttg--tttacattatttcagctcatctccttaacataaatttctatcagtggaattgctggtttatgctgttataaaatttttcatgttattaatacag----actg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120923491 477 + 123690457 aggctggagtgcaacggcatgatttcggcccactgcaacctccgccttg---------gtgattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgccaggctaattttttg-------------tatatttagtagagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatccactcaccttggcctcccaaagtgctgggattacaggcg------------------------------------tgagcct------ccgcgcccagcc--TAAACActaaataataagccatcatagagaaagctcatattgttaacttactgttggacaatcaggatatttccaatgtattgcttattttaaataaagcgctgatgactatcttcgtg-ataacgttttg--tttacattatttcagctcacctccttaacataaatttctatcagtggaattactgattaatgctgttataaaatttttcatgttattaatacag----actg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202504922 482 + 204787373 aggctggagtgcaatggcatgatttcggctcactgcaaactccacctcc---------gtgattctcctgcctcagcctcccaagtagctgagattacaggtgtgtgccaccatgccacgctaaatttttg-------------tatttttagtagagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaattct----------tgacctcaggttatccgctcacctcagcctcccaaagtgctgggagtacaggtg------------------------------------tgagcca------ccgcactcggcc--TAAACATTAaataataaatcatcgtagaaaaagctcatattgttaacttactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactaacttcgtgtataatgtttcg--tttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgctataaaatttttcatgttattaatacagaaatactg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 111709 482 + 192460366 aagctggagtgcaatggcatgatttcggctcactgcaaactccacctcc---------gtgattctcctgcctcagcctcccaagtagctgagattacaggtgtgcgccaccatgccacgctaaatttttg-------------tatttttagtagagactgggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatctgctcacctcagcctcccaaagtgctgggagtacaggtg------------------------------------tgagcca------ccgcactcggcc--TAAACATTAaataataaatcatcgtagaaaaagctcatattgttaacttactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtataatgtttcg--tttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgctataaaatttttcatgttattaatacagaaatactg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 526641 482 + 16847902 aggctggagtgcaatgacatgatttcggctcactgcaaactccacctcc---------gtgattctcctgcctcagcctcccaagtagctgagattacaggtacgcgccaccatgccaggctaaatttttg-------------tattttcagtagagactgggtt----------tcaccatgttgg-----ctaggctg-----------------gtctcaaactct----------tgacctcaggtgatccgctcacctcagcctcccaaagtgctgggagtacaggtg------------------------------------tgagcca------ccgcacccggcc--TAAACATTAAATAATAAATCATCGTAGAAAAAGCTCATATTGTTAActtactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtataatgcttcg--tttacatcatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgttataaaatttttcatgttattaatacagaaatactg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 460051 482 - 91754291 aggctggagtgcaatgacatgatttcggctcactgcaaactccacctcc---------gtgattctcctgcctcagcctcccaagtagctgagattacaggtgtgtgccaccatgccaggctaaatttttg-------------tatttttagtagagacagggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcagatgatccgctcacctcagcctcccaaagtgctgggattacaggtg------------------------------------tgagcca------ccgcacccgtcc--TAAACATTAAATAATAAATCATCGTAGAAAAAGCTCATATTGTTAActtactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtataatgtttcg--tttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgttataaaatttttcatgttattaatacagaaatactg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 643427 482 - 1977891 aggctggagtgcaatgacatgatttcggctcactgcaaactccacctcc---------gtgattctcctgcctcagcctcccaagtagctgagattacaggtacgcgccaccatgccaggctaaatttttg-------------tattttcagtagagactgggtt----------tcaccatgttgg-----ccaagctg-----------------gtctcaaactct----------tgacctcaggtgatccgctcacctcagcctcccaaagtgctgggattacaggtg------------------------------------tgagcca------ccgcacccggcc--TAAACATTAaataataaatcatcgtagaaagagctcatattgttaacttactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtataatgtttcg--tttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgctataaaatttttcatgttattaatacagaaatactg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 498844 480 + 7796314 aggctggagtgcaatggcatgatttcggctcactgcaaa--ccacctcc---------gtgattctcctgcctcagcctcccaagtagctgggattacaggtgtgtgccaccatgccaggctaaatttttg-------------tatttttagtagagacagggtt----------tcaccatgttgg-----ccaggctg-----------------gtctcaaactct----------tgacctcaggtgatctgctcacctcagtctcccaaagtgctgggattacaggtg------------------------------------tgagcca------ccgcacccggcc--TAAACATTAAATAAGAAGTCATCGTAGAAAAAGCTCATATTGTTAActtactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctggtgactatcttcatgtataatgtttca--tttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgttataaaatttttcatgttattaatacagaaatactg i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 463569 575 - 608964 tgggtagagtgccatggcatca---cagctcacagcaacttccaactcctgggcttaagcaattctcttgcctcagcctcccaagtagctgggactacagtcatccaccacaatgtctggcttttttttggttgcacccgtcattgttgtttggcaggcctgggttggatttgaacccaccaccttgggtgtacgtggctggcgccttagccgcttgagccacagactctgagccAGACATAGCCTTTATTTATTTATTTAtttttggct-----ggggctgggtttgaacctgccacctctggcatatggagccggcatcctatccttttgagccacaggcgccgc-ccCAGCCtttaaacgttaaataatattccattacagggaaatccagta--attaactcac-actgaatatttagtctgcttctaatgtgttgc-tattacaaataatgctttgacaactatctttgggcataatgttctgttttttcactattccagttcattttcttgtcacaaatttctgtctgtgaaatacatggttaatggtgccataaaaatattcttgttattaatatat----gctg i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 596779 1052 + 19675229 I e calJac3.chr17 963246 8726 - 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=982869.000000 s hg38.chr3_KI270779v1_alt 177650 163 + 205312 ccaaatttctttgcagaaagcttatgccaatttacagacctgttggcagtgtgcaagagtgtgc-ctgtttccccatatccctagccTGTGAACAAAGGGGCATGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAC----AGCATCGACTGAAAA s panTro5.chr3 200164323 163 + 202621043 ccaaatttctttgcagaaagcttatgccaatttacagacctgttggcagtgtgcaagagcgtgc-ctgtttccccatatccctagccTGTGAACAAAGGGGCATGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAC----AGCATCGACTGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121030 163 + 190779 ccaaatttctttgcagaaagcttatgccaatttacagacctgttggcagtgtgcaagagcgtgc-ctgtttccccatatccctagccTGTGAACAAAGGGGCATGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAC----AGCATCGACTGAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11801 163 - 189199 ccaaatttctttgcagaaagcttatgccaatttacagacctgttggcagtgtgcaagagcgtgc-ctgtttccccatatccctagccTGTGAACAAAGGGGCATGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAC----AGCATCGACTGAAAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120923968 163 + 123690457 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagcgtgc-ctgtttccccatatccctggccTGTGAACAAAGGGGCATGATCCAGGACAGGCCTCATCCCTCACCTGCTGCTCTTTGCTTCAC----AGCATCGACTGAAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202505404 162 + 204787373 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagtgtgc-ctgtttccccatat-cccggccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCTTCACCTGCTGCTCTTTGCTTCAT----AGCATCGATTGAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 112191 162 + 192460366 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagaatgtgc-ctgtttccccatat-cccggccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCTTCACCTGCTGCTCTTTGCTTCAT----AGCATTGATTGAAAA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 527123 162 + 16847902 ccaaatttctttgcagaaagcttgtgtcaatttacagacctgttggcagtgtgcaagagtgtgc-ctgtttcctcatat-cccggccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAT----AGCATCAATTGAAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 460533 162 - 91754291 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagtgtgc-ctgtttccccattt-cccagccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCGT----AGCATCGATTGAAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 643909 162 - 1977891 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagtgtgc-ctgtttcctcatat-cctggccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAT----AGCATCAATTGAAAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 499324 163 + 7796314 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagtgtgc-ctgtttccccatgtccccgGCCTGTGAATACAGGGGCACGATCCCGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCAT----AGCATCGATTGAAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73779080 163 + 74750902 ctaaatttcattgcagaaagattgtaccaatgtacagacctgctggcagagtgcaaggccgtgc-ctgttgccccgtatccccTGTCTGTGCACAAAGGGGCATGATCCAGGACAGGCCCCAGCCCTGCGCTGCTGCTCTTTGCTTTGT----AGCACCAACTGAAAA i calJac3.chr17 n 8726 C 0 s otoGar3.GL873829 464144 157 - 608964 ccaaatttctcttcagaaaggttgtgccattttatagtccggttggcagtgtacgagagagagtactgtttcccaatat----cACCTTTGAATAAAGGGGCATGCTCTAGGGGAGGGACCTGTCC-------CTGCTCTGTGCCTCATTCAAGGTACTAACTTTAAA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 596779 1052 + 19675229 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=79021.000000 s hg38.chr3_KI270779v1_alt 177813 16 + 205312 -TCggcca---ggtgcggtg s panTro5.chr3 200164486 16 + 202621043 -TCggcca---ggtgaggtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121193 16 + 190779 -TCggcca---ggtgaggtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11964 16 - 189199 -TCggcca---ggtgcggtg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924131 16 + 123690457 -TCggccg---ggtgcagtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202505566 16 + 204787373 -TCggcca---ggtgcagtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 112353 16 + 192460366 -TCggcca---ggtgcagtg i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 527285 16 + 16847902 -TCggcca---ggtgcagtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 460695 16 - 91754291 -TCggcca---ggtgcagtg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644071 16 - 1977891 -TCggcca---ggtgcagtg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 499487 16 + 7796314 -TCggcca---ggtgcagtg i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 464301 20 - 608964 TCTTGCCAAACAGTGCTGTG i otoGar3.GL873829 C 0 I 291 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 596779 1052 + 19675229 I e calJac3.chr17 73779243 0 + 74750902 C e saiBol1.JH378146 486718 4546 + 17725628 I a score=1285580.000000 s hg38.chr3_KI270779v1_alt 177829 283 + 205312 cctcacacctgtaatcccagcactttgggaggtcgaagcgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattacccaggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatctctcaaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgggactccatctc-------aaaaaaaa---aaaaaaT s panTro5.chr3 200164502 283 + 202621043 cctcacacctgtaatcccagcagtttgggaggtcgaagtgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattaaccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatctctcaaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagcgggactccatctc-------aaaaaaaa---aaaaaGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121209 282 + 190779 cctcacacctgtaatcccagcactttgggaggtcgaagtgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattaaccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatctctcaaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagcgggactccatctc--------aaaaaaa---aaaaaGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 11980 286 - 189199 cctcacacctgtaatcccagcactttgggaggtcgaagcgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattacccaggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatctctcaaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgggactccatctc----aaaaaaaaaaa---aaaaaGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924147 287 + 123690457 cctcacacctgtaatcccagcactttgggaggtcgaggcgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattacccaggca--atgg-gtgcacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagatcatgccactgcactccagcctgggcgacagagcgggactccatctcaaaaaaaaaaaaaaa---aaaaaGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202505582 283 + 204787373 gctcacacctgtaatcccagcactttgggaggtcgaggcaggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcgggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaagcggaggttgcagtgagctgagatcgtgccattgcgctccagcctgggcgacagagcgggactccatctc----aggaaaaaaaa---aaaa--- i rheMac8.chr2 C 0 I 17 s macFas5.chr2 112369 283 + 192460366 gctcacacctgtaatcccagcactttgggaggtcgaggcaggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaagcggaggttgcagtgagccgagatcgtgccattgcgctccagcctgggcgacagagcgggactccatctc----aggaaaaaaaa---aaaa--- i macFas5.chr2 C 0 I 15 s cerAty1.NW_012004056v1 527301 283 + 16847902 gctcacacctgtaatcccagcactttgggaggtcgaggcgggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcaggtggtggtggcaggtgcctgtaattccagctactcgggaggctgaggcaggagaattgcttgaacccgggaagcggaggttgcagtgagccgagatcgtgccattgcgctctagcctgggcgacagagcaggactccatctc----aggaaaaaaaa---aaga--- i cerAty1.NW_012004056v1 C 0 I 19 s chlSab2.chr15 460711 283 - 91754291 gctcacacctgtaattccagcacttcgggaggtcgaggcgggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaagcggaggttgcagtgagccgagatcgtgccattgtgctccagcctgggcgacagagcaggactccatctc----aggaaaaaaaa---aaag--- i chlSab2.chr15 C 0 I 16 s manLeu1.NW_012102020v1 644087 286 - 1977891 gctcacacctgtaatcccagcactttgggaggtcgaggcgggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaactacaaaaattagcagggggtggtggcaggtgcctgtaattccagctactcgggaggctgaggcaggagaattgcttgaacccgggaagcggaggttgcagtgagccgagatcgtgccattgcgctctagcctgggcgacagagcgggactccatctc----aggaaaaaaaaaagaaaa--- i manLeu1.NW_012102020v1 C 0 I 16 s colAng1.NW_012118932v1 499503 283 + 7796314 gctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcagatgcctgtaaacccagctacttgggaggctgaggcaggagaattgcttgaacctgggaagcagaggttgcagtgagccgagatcgtgccattgcactccagcctgggcgacagagcgggactccatctc----aggaaaaaaag---aaaa--- i colAng1.NW_012118932v1 C 0 I 22 e otoGar3.GL873829 464321 291 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e macNem1.NW_012014355v1 596779 1052 + 19675229 I e calJac3.chr17 73779243 0 + 74750902 C e saiBol1.JH378146 486718 4546 + 17725628 I a score=202932.000000 s hg38.chr3_KI270779v1_alt 178112 30 + 205312 TCTTGCTaaacagggctgtgtcctggtagt s panTro5.chr3 200164785 29 + 202621043 -CTTGCTaaacagggctgtgtcctggtagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121491 29 + 190779 -CTTGCTaaacagggctgtatcctggtagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12266 29 - 189199 -CTTGCTaaacagggctgtgtcctggtagt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924434 29 + 123690457 -CTTGCTaaacagggctgtgtcctggtagt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202505882 30 + 204787373 TCTTGCTaaacaaggctgtgtcctgatagt i rheMac8.chr2 I 17 C 0 s macFas5.chr2 112667 30 + 192460366 TCTTGCTaaacaaggctgtgtcctgatagt i macFas5.chr2 I 15 C 0 s macNem1.NW_012014355v1 597831 30 + 19675229 TCTTGCTaaacaaggctgtgtcctgatagt i macNem1.NW_012014355v1 I 1052 C 0 s cerAty1.NW_012004056v1 527603 30 + 16847902 TCTTGCTaaacaaggctgtgtcctgatagt i cerAty1.NW_012004056v1 I 19 C 0 s chlSab2.chr15 461010 30 - 91754291 TCTTGCTaaacaaggctgtgtcctgatagt i chlSab2.chr15 I 16 C 0 s manLeu1.NW_012102020v1 644389 30 - 1977891 TCTTGCTaaacaaggctgtgtcctgatagt i manLeu1.NW_012102020v1 I 16 C 0 s colAng1.NW_012118932v1 499808 30 + 7796314 TCTTGCTaaacaaggctgtgtcctgatagt i colAng1.NW_012118932v1 I 22 C 0 s calJac3.chr17 73779243 30 + 74750902 CCTTGCTaaacacggctgtgtcctggtagt i calJac3.chr17 C 0 C 0 e otoGar3.GL873829 464321 291 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1428963.000000 s hg38.chr3_KI270779v1_alt 178142 197 + 205312 cctccttttaaatctttatttagagaacttgctcatcttgagccaagttgattag-agtttcctgctgccgcaa----------ataggagggcaagtgagtcactgcatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggctt---gtgaggaggaagagattagcattcgttacgac- s panTro5.chr3 200164814 197 + 202621043 cctccttttaaatctttatttagagaacttgctcatcttgagccaagttgattag-agtttcctgctgccgcaa----------ataggagggcaagtgagtcactgcatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggctt---gtgaggaggaagagattagcgttcattacgac- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121520 197 + 190779 cctccttttaaatctttatttagagaacttgctcatcttgagccaagttgattag-agtttcctgctgccgcaa----------ataggagcgcaagtgagtcactgcatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggctt---gtgaggaggaagagattagcattcattacgac- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12295 197 - 189199 cctccttttaaatctttatttagagaacttgctcatcttgagccaagttgattag-agtttcctgctgccgcaa----------ataggagggcaagtgagtcactgcatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggctg---gtgaggaggaagagattagcattcgttacgac- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924463 197 + 123690457 cctccttttaaatctttatttagagaacttgctcatcttgagccgagttgattag-agtttcctgctgccacaa----------ataggagggcaagtgagtcattgtatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggctt---gtgaggaggaagagattagcattcattacgac- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202505912 198 + 204787373 cctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaa----------acaggaggacaggcgagtcactgcatgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggctt---gtgaggaggaagagatgagcattcgttacgaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 112697 198 + 192460366 cctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaa----------acaggaggacaggtgagtcactgcatgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggctt---gtgaggaggaagagatgagcattcgttacgaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 597861 198 + 19675229 cctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaa----------acaggaggacaggtgagtcactgcatgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggctt---gtgaggaggaagagatgagcattcgttacgaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 527633 197 + 16847902 cctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaa----------acaggaggacaggtgagtcactgcatgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggctt---gtgaggaggaagagatgaacattcgttacgac- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461040 195 - 91754291 cctcgttttgcatctttatttagagaacctgctcatcttgagctgagttgatt---agtttcctgctgcggcaa----------acaggaggacaggtgagtcactgcctgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgagctt---gtgaggaggaagagatgagcattcgttacgac- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644419 197 - 1977891 cctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaa----------acaggaggacaggtgagtcacggcatgcggaggacatagctttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggctt---gtgaggaggaagagatgagcattcgttacgac- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 499838 197 + 7796314 cctccttttaagtctttatttagagaacctgctcatcttgagctgagttggttag-agtttcctgctgcagcca----------acaggaggacaggtgagtcactgcatgcggagggcataattttattgtcTAGGGGAGAAGGCGCTGTCAAAATCTCTCAGTTTGTTGGGCTT---GTGAGGAGGAAGAGATGAGCATTCGTTACGAC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73779273 198 + 74750902 cctccttttaaatctttatttagagaacttgctcatcttgagccgagttgatgaacagtttcctgctgcctgga----------ataggagggcaagagagtcacttcatgtggaggacataggtttattgtctagggaagaaggcacagtcaaaatctctcaatgtgttgggctt---gtgagaaggaagagattagtgttcatgacgac- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 464612 210 - 608964 cctggTGCTAACTCATTATTTTAAAAACGTACTAATCATGGGCCAAGTTGATTAG-AGTTTCCTGCTGCAGTGAACAGGAAGATacaggaagataagtgagtcatttcaggttgatggtatagttttatcgtctaggggagaaggtgcagtcaaagtctttcaatctgttaggcttgtcgtgagaaggaagagattagcattacttacgac- i otoGar3.GL873829 I 291 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3931575 3253 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=824115.000000 s hg38.chr3_KI270779v1_alt 178339 113 + 205312 aaaactacagttattgcatttgtctttcaccatcatttaaacaatacctctgaagccactcctgcaatagattgattattcagctgtttaggaaaacaatttgcagataactc s panTro5.chr3 200165011 113 + 202621043 aaaactacagttattgcatttgtctttcaccatcatttaaacaatacctctgaagccactcctgcaatagattgattattcagctgtttaggaaaacaatttgcagataactc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121717 113 + 190779 aaaactacagttattgcatttgtctttcaccatcatttaaacgatacctctgaagccactcctgcaatagattgattattcagctgtttaggaaaacaatttgcagataactc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12492 113 - 189199 aaaactacagttactgcatttgtctttcaccatcatttaaacaatacctctgaagccactcctgcaatagattgattattcagctgtttaggaaaacaatttgcagataactc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924660 111 + 123690457 aaaact--aGTTATTGCATTTGTCTTTCACCATCATTTAAACAATACATCTGAAGCCACTCCTGCAATAGATTGATTATTCAGCTATTTAGGAAAACAGTTTTCAGATAACTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506110 108 + 204787373 aaaaccacagttaccgcatttgtctttcaccgtcgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 112895 108 + 192460366 aaaaccacagttaccgcatttgtctttcaccgtcgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598059 108 + 19675229 aaaaccacagttactgcatttgtctttcaccgttgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 527830 108 + 16847902 aaaaccacagttactgcatttgtctttcaccgtcgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461235 108 - 91754291 aaaaccacagttactgtatttgtctttcaccgttgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644616 108 - 1977891 aaaaccacagttactgcatttgtctttcaccgttgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500035 108 + 7796314 AAAACCACAGTTATTGCATTTGTCTTTCACCGTCGTTTAAACA-----TCTGAAGCCACGCCTGCCGCAGATTGATTATTCAGCTATTTAGGAAAGCAGTTTGCAGGTAACTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73779471 111 + 74750902 -aaactacggttactgcatttgtctttcaccat-atttaaacagtagaccttaagctgctcctccaacggattcatcattcagctatttaggaaaacagtttgcagataactc i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 464822 113 - 608964 aaaaggacaattatcgtgtttgtctttcattgccatttaaacaataaatcttatgccactcctgtagcagattgattattcagctatttagggaaacagtttgcagataactc i otoGar3.GL873829 C 0 I 253 s dasNov3.JH569502 3934828 104 + 6579706 AAAACTACAGTGATTGTATTTGATTTTCACCACCATTTAAATAAAAAA----AAAACACTCCTTCAAGAGATT----ATTCAGTTACTTAGAAAAACAGTTTACAG-TATCTC i dasNov3.JH569502 I 3253 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=396188.000000 s hg38.chr3_KI270779v1_alt 178452 58 + 205312 aatctACTAAGCTTGAGTAGGTTATTTGTAGGTAAGAAATCC--TGTGTTCAAGTATGAC s panTro5.chr3 200165124 58 + 202621043 aatctACTAAGCTTGAGTAGGTTATTTGTAGGTAAGAAATCC--TGTGTTCAAGTATGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121830 58 + 190779 aatctACTAAGCTTGAGTAGGGTATTTGTAGGTAAGAAATCC--TGTGTTCAAGTATGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12605 58 - 189199 aatctACGAAGCTTGAGTAGGTTATTTGTAGGTAAGAAATCC--TGTGTTCAAGTATGAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924771 58 + 123690457 AATCTACTAAGCTTGAGTAGGTTATTCATAGGTAAGAAATCC--TGTGTTCAAGTATGAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506218 58 + 204787373 aatctACTAAACCTGAGTAGGTTATCTGTAGGTAAGAAATTC--TGTGTTCAAGTATGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113003 58 + 192460366 aatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTC--TGTGTTCAAGTATGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598167 58 + 19675229 aatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTC--TGTGTTCAAGTATGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 527938 58 + 16847902 aatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTC--TGTGTTCAAGTATGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461343 58 - 91754291 aatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTC--TGTGTTCAAGTATGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644724 58 - 1977891 aacctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTC--TGTGTTCAAGTATGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500143 60 + 7796314 AATCTACTAAACTTGAGTAGGTTATTTGTAGGTAAGAAATTCTTTATGTTCAAGTATGAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 73779582 58 + 74750902 aatctACTAAACTTGAGTAGGTTATTCCTAGGTAAGAAACAA--TGTGTTCAAGTATGAC i calJac3.chr17 C 0 n 0 s dasNov3.JH569502 3934932 39 + 6579706 AATCTACCAAATTTGATTAGGTTATTCT----TAAGAAATCC--T--------------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 464935 253 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=23965.000000 s hg38.chr3_KI270779v1_alt 178510 10 + 205312 CTATCTTT---------A------C s panTro5.chr3 200165182 10 + 202621043 CTATCTTT---------A------C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121888 10 + 190779 CTATCTTT---------A------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12663 10 - 189199 CTATCTTT---------A------C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924829 10 + 123690457 CTACCTTT---------A------A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506276 16 + 204787373 CTATCTTT---aaaaaaa------a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113061 16 + 192460366 CTATCTTT---aaaaaaa------a i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598225 14 + 19675229 CTATCTTT-----AAAAA------A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 527996 18 + 16847902 CCATCTTT-aaaaaaaaa------a i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461401 25 - 91754291 CTATCTGTaaaaaaaaaaaaaaaga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644782 19 - 1977891 CCATCTTTaaaaaaaaaa------a i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500203 16 + 7796314 CTATCTTT---aaaaaaa------a i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 464935 253 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3934971 0 + 6579706 C e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e calJac3.chr17 73779640 0 + 74750902 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=39110.000000 s hg38.chr3_KI270779v1_alt 178520 9 + 205312 AAAGAAG-AA s panTro5.chr3 200165192 9 + 202621043 AAAGAAG-AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121898 9 + 190779 AAAGAAG-AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12673 9 - 189199 AAAGAAG-AA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924839 10 + 123690457 AAAAAAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506292 9 + 204787373 aaaaaaa-ga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113077 9 + 192460366 aaaaaaa-ga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598239 9 + 19675229 AAAAAAA-GA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 528014 9 + 16847902 aagaaaa-ga i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461426 9 - 91754291 aagaaaa-ga i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644801 9 - 1977891 aagaaaa-ga i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500219 9 + 7796314 aaaaaaa-ga i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 971972 9 - 74750902 aaagaaa-ag i calJac3.chr17 I 8726 C 0 e otoGar3.GL873829 464935 253 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3934971 0 + 6579706 C e canFam3.chr33 29095887 5911 + 31377067 I e aotNan1.NW_018507959v1 23369 1281 - 3732694 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=373030.000000 s hg38.chr3_KI270779v1_alt 178529 50 + 205312 AAAGAAAGAAATCCTAGTGGATGGAGAGACTATGGAGAATGATTTTTGGT s panTro5.chr3 200165201 50 + 202621043 AAAGAAAGAAATCCTAGTGGATGGAGAGACTATGGAGAATGATTTTTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121907 50 + 190779 AAAGAAAGAAATCCTAGTGGATGGAGAGTCTATGGAGAATGATTTTTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12682 50 - 189199 AAAGAAAGAAATCCTAGTGGATGGAGAGACTATGGAGAACGATTTTTGGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924849 50 + 123690457 AAAGAAAGAAGTCCTAGTGGATGGAGAGACTATGGAGAATGATTTTTGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506301 50 + 204787373 aaagagagaaaTCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113086 50 + 192460366 aaagagagaaaTCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598248 50 + 19675229 AAAGAGAGAAATCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 528023 50 + 16847902 aaagagagaaaTCCTAGTGGACGGAGGGACTATGGAGAGTTACTTTTGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461435 50 - 91754291 aaagagagaaaTCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644810 50 - 1977891 aaagagagaaaTCCTAGTGGACGGAGGGACTATGGAGAGTTACTTTTGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500228 50 + 7796314 aaagagagaaaTCCTAGTGGACGGAGAGACTATGGAGAGTTATTTTCGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 971981 50 - 74750902 aaagaaagaaATTCTAGTGGGTGGAGAGAACATAGCGAATGATTTTTGGT i calJac3.chr17 C 0 C 0 s aotNan1.NW_018507959v1 24650 50 - 3732694 aaagaaagaaaTTCTAGTGGGTGGAGAGACCATAGAGAATGATTTTTGGT i aotNan1.NW_018507959v1 I 1281 C 0 s dasNov3.JH569502 3934971 44 + 6579706 ------AGGACTGGGGGTGAGTACAGGTACGCTACAGAGTTCTTTTCAGT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 464935 253 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e cebCap1.NW_016107444v1 462584 1742 - 6778120 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=198912.000000 s hg38.chr3_KI270779v1_alt 178579 22 + 205312 AAGAAAATGGTTCTCA---gctggg s panTro5.chr3 200165251 22 + 202621043 AAGAAAATGGTTCTCA---gctggg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121957 22 + 190779 AAGAAAATGGTTCTCA---gctggg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12732 22 - 189199 AAGAAAATGGTTCTCA---gctggg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924899 22 + 123690457 AAGAAAATGGTGCTCA---gctggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506351 22 + 204787373 AAGAAAACGGTTCTCA---gctgga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113136 22 + 192460366 AAGAAAACGGTTCTCA---gctgga i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598298 22 + 19675229 AAGAAAACGGTTCTCA---gctgga i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 528073 22 + 16847902 AAGAAAACGGTTCTCA---gctggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461485 22 - 91754291 GAGAAAACGGTTCTCA---GCTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644860 22 - 1977891 AAGAAAACGGTTCTCA---gctggg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500278 22 + 7796314 AAGAAAATGGTTCTTA---gctggg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972031 22 - 74750902 AAGAAAGTGGTTCTCA---gcgggg i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464326 22 - 6778120 aagaaaaTTGGTCTCA---GTGggg i cebCap1.NW_016107444v1 I 1742 C 0 s aotNan1.NW_018507959v1 24700 22 - 3732694 GAGAAAATGGTTCTCA---GTGggg i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3935015 25 + 6579706 AAGAAAATTgttctcaaaggttggg i dasNov3.JH569502 C 0 I 89 e otoGar3.GL873829 464935 253 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=657451.000000 s hg38.chr3_KI270779v1_alt 178601 96 + 205312 catggtagctcatgcctaaaatcccagcacggacaggcagaggcgggaggattccttgaggccaggagtttgagaccagcctgggcaatagctcaa s panTro5.chr3 200165273 96 + 202621043 catggtagctcatgcctaaaatcccagcacggacaggcagaggcgggaggattccttgaggccaggagtttgagaccagcctgggcaatagctcaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 121979 96 + 190779 catggtagctcatgcctaaaatcccagcacggacaggcagaggcgggaggattccttgaggccaggagtttgagaccagcctgggcaatagctcaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12754 96 - 189199 catggtagctcatgcctaaaatcccagcacggacaggcagaggcgggaggattccttgaggccaggagtttgagaccagcctgggcaatagctcaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120924921 96 + 123690457 catggtagctcatgcctaaaatcccagcacggacaggtggaggcgggaggatagcttgaggccaggagtttgagaccagcctgggcaatagagcaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506373 95 + 204787373 catggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaata-agcaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113158 95 + 192460366 catggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaata-agcaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598320 95 + 19675229 catggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaata-agcaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 528095 95 + 16847902 catggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaata-agcaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461507 34 - 91754291 CATGGTAGCGTACACCTAAAATCCCAGCATGGAC-------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644882 95 - 1977891 catggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaata-agcaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500300 96 + 7796314 cacggtagcacacgcctaaaatcccagcatggacagtctgaagcgggaggattgcttcaggccaggagtttgagaccagcctgggcaatagagcaa i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972053 91 - 74750902 catggtagctcacgcctataatcccagcactgacaggcggaggttggaggatggcttgaggccaggaatttgagaccagcctgggaaatag----- i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464348 95 - 6778120 catgggagctcacgcctgt-atcccagcactgacaggcggaggtgggaggatggcttgagcccaggaatttgagaccagcctgggcaatagagcaa i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 24722 96 - 3732694 cgtggtagctcatgcctataatcccagcactgacaggctgaggtgggaggatggtttgaggccaggaatttgagaccagcctgggcaatagagcaa i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 464935 253 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935040 89 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=136927.000000 s hg38.chr3_KI270779v1_alt 178697 35 + 205312 gaccccttctctgaaaaaaaaaaa-----aaaaA----AAAAAG----------------------------------------------- s panTro5.chr3 200165369 30 + 202621043 gaccccttctctgaaaaaaaaaaa-----aaaaA---------G----------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122075 31 + 190779 gaccccttctctgaaaaaaaaaaa-----aaaaA--------AG----------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12850 39 - 189199 gaccccttctctGaaaaaaaaaaa-----aaaaaaaaaaaaaaG----------------------------------------------- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925017 34 + 123690457 gaccccttctctgaaaaaaaaaaa-----aaaaA-----AAAAG----------------------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506468 34 + 204787373 gaccccttctctgaaaaaaaaaaa-----aaaaA-----AAAAG----------------------------------------------- i rheMac8.chr2 C 0 I 2 s macFas5.chr2 113253 34 + 192460366 gaccccttctctgaagaaaaaaaa-----aaaaA-----AAAAG----------------------------------------------- i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 598415 30 + 19675229 gaccccttctctg----aaaaaaa-----aaaaa-----aaaAG----------------------------------------------- i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 528190 34 + 16847902 gaccccttctctgaaagaaaaaaa-----aaaaC-----AAAAA----------------------------------------------- i cerAty1.NW_012004056v1 C 0 I 1725 s chlSab2.chr15 461541 2 - 91754291 ------------------------------------------AG----------------------------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 644977 34 - 1977891 gaccccttctctggaaaaaaaaaa-----aaaaA-----AAGAG----------------------------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500396 34 + 7796314 gaccccttctctgaaaaaaaaaaa-----aaaaa-----aaaaa----------------------------------------------- i colAng1.NW_012118932v1 C 0 I 9 s calJac3.chr17 972144 30 - 74750902 ---------cctggaaaaaataaataaaTAAAAT-----AAAAG----------------------------------------------- i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464443 27 - 6778120 gaccccttctctgaaaa------------aaaaa-----aaaCG----------------------------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 24818 39 - 3732694 gaccccttctctgaaaaaaaaaaacaaaAAACAA-----AAACG----------------------------------------------- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465188 81 - 608964 GACCTCATCTTAATAAAGAGAAAG-----AAAGA-----AGGAAATGCTGGTGAGGGGAGAAGACCTTGGAGAAGCCCTTTGGAAAGAAag i otoGar3.GL873829 I 253 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935040 89 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=168473.000000 s hg38.chr3_KI270779v1_alt 178732 22 + 205312 TGGTTCTCAAAAGGCAGAGGGT s panTro5.chr3 200165399 22 + 202621043 TGGTTCTCAAAAGGCAGAGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122106 22 + 190779 TGGTTCTCAAAAGGCAGAGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12889 22 - 189199 TGGTTCTCAAAAGGCAGAGGGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925051 20 + 123690457 TGGTTCTCAAAAGGC--AGGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506504 20 + 204787373 TGGTTCTCCAAAAGC--AGGGT i rheMac8.chr2 I 2 C 0 s macFas5.chr2 113289 20 + 192460366 TGGTTCTCCAAAAGC--AGGGT i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 598447 20 + 19675229 TGGTTCTCCAAAAGC--AGGGT i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 529949 20 + 16847902 TGGTTCTCCAAAAGC--AGGGT i cerAty1.NW_012004056v1 I 1725 C 0 s chlSab2.chr15 461543 20 - 91754291 TGGTTCTCCAAAAGC--AGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645011 20 - 1977891 TGGTTCTCCAAAAGC--AGGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500439 20 + 7796314 TGGTTCTCAAAAAGC--AGGGT i colAng1.NW_012118932v1 I 9 C 0 s calJac3.chr17 972174 20 - 74750902 TGGTTCTCAAAAGAT--AGGGT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464470 20 - 6778120 TGGTTCTCCAAAGAC--AGGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 24857 20 - 3732694 TGGTTCTCAAAAGAT--AGGGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465269 20 - 608964 cggttcttcaatgat--agggt i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935040 89 + 6579706 I e canFam3.chr33 29095887 5911 + 31377067 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=72950.000000 s hg38.chr3_KI270779v1_alt 178754 11 + 205312 GCatcagca---------------------------tt s panTro5.chr3 200165421 11 + 202621043 GCatcagca---------------------------tt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122128 11 + 190779 GCatcagca---------------------------tt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12911 12 - 189199 GCATCAgca--------------------------ttt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925071 11 + 123690457 GCATCAAca---------------------------tt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506524 11 + 204787373 GCCTCAgca---------------------------tt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113309 11 + 192460366 GCCTCAgca---------------------------tt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598467 11 + 19675229 GCCTCAgca---------------------------tt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 529969 11 + 16847902 GCCTCAgca---------------------------tt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461563 11 - 91754291 GCCTCAgca---------------------------tt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645031 11 - 1977891 GCCTCAgca---------------------------tt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500459 11 + 7796314 GCCttggca---------------------------tt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972194 10 - 74750902 GCA-CAgca---------------------------tt i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464490 11 - 6778120 GCatcggca---------------------------tt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 24877 11 - 3732694 GCatcagca---------------------------tt i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465289 38 - 608964 gcatcggaatccctgggtgaactcgtaaaaatgtattc i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3935129 11 + 6579706 gaatctgca---------------------------tt i dasNov3.JH569502 I 89 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=1235202.000000 s hg38.chr3_KI270779v1_alt 178765 117 + 205312 ttaa-------------------------------------------cacatgtccagagtgattctgatgcaggtggtccgtggaccccacgttcagaaacactTCCCTTAAAATAAAATGATAGTATCCACTCTTAACA--ATGTTTGTAAGCCAAAACC s panTro5.chr3 200165432 117 + 202621043 ttaa-------------------------------------------cacatgtccagagtgattctgatgtaggtggcccgtggaccccatgttcagaaacactgCCCTTAAAATAAAATGATAGTATCCACTCTTAACA--ATGTTTGTAAGCCAAAACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122139 117 + 190779 ttaa-------------------------------------------cacatgtccagagtgattctgatgtaggtggcccgtggaccccacgttcagaaacactgCCCTTAAAATAAAATGATAGTATCCACTCTTAACC--ATGTTTGTAAGCCAAAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 12923 117 - 189199 ttaa-------------------------------------------cacatgcccagagtgattctgatgtaggtggtccgtggaccacacgttaagaaacactgCCCTTAAAATAAAAtgatagtatccactcttaaca--atgtttgtaagccaaaacc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925082 115 + 123690457 ttaa-------------------------------------------cacacacccagagtgattctgatataggtggtccgtggac--cacgttaagaaacactACCCTTAAAATAAAATGATAGTATCCACTATTAACA--ATGTTCGTAAGCTAAAAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506535 114 + 204787373 ttaa-------------------------------------------cacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGCATCCACTTTTA-----ATGTTTGTAAGCTAAAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113320 114 + 192460366 ttaa-------------------------------------------cacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGCATCCACTTTTA-----ATGTTTGTAAGCTAAAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598478 114 + 19675229 ttaa-------------------------------------------cacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaaaactgCCCTTAAAATAAAATGATAGCATCCACTTTTA-----ATGTTTGTAAGCTAAAACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 529980 114 + 16847902 ttaa-------------------------------------------cacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGTATCGACTTTTA-----ATGTTTGTAAGCTAAAACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461574 114 - 91754291 ttaa-------------------------------------------cacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactTCCCTTAAAATAAAATGATAGTATCCACTTTTA-----ATGTTTGTAAGCTAAAACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645042 114 - 1977891 ttaa-------------------------------------------cacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGCATCCACTTTTA-----ATGTTTGTAAGCTAAAACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500470 114 + 7796314 ttaa-------------------------------------------cacatgccccgagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGTATCCACTTTTA-----ACGTTTGTAAGCTAAAACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972204 117 - 74750902 ttaa-------------------------------------------cacatgcccagagtgattctgatacaggtggtctatggaccacacgttaagaaacactgCCCTTAAAATAAAAtgatagtatctactcttaaca--atgtttgtaagctaaaatc i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464501 117 - 6778120 ttaa-------------------------------------------cacatgcccagagtgattccaatacaggtggtctatggaccacatgttaagaaacactgCCCTTAAAATAAAATGATAGTATCTACTCTTAACA--ATGTTTGTAAGCTAAAATC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 24888 117 - 3732694 ttaa-------------------------------------------cacacgcccagagtgactctgatacgggtggtctatggaccacatgttaagaaacactgCCCTGAAAATAAAATGGTAGTATCTACTCTTAACG--ATGTTTGTAAGCTAAAATC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465327 150 - 608964 ttgagccacagccaaaaggtctgattccctatgtatggggtgaggtccatatgcccagggtgactctgatacaggtggtctgtggaccacctcttaagaaacattgCCCT-----TAAAATGATAGTATTTGTTCTTTAAA--AAGTTTAT-----AAAGCC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29101798 119 + 31377067 ttaa-------------------------------------------cacatgtgctgggtggttttgatacccatgatctatggaccacattttaaggaacactgCCCTTAAAATAAAAtgatagtatctgctcttaagatcttttttgtaagctaaaacc i canFam3.chr33 I 5911 C 0 s dasNov3.JH569502 3935140 117 + 6579706 ttaa-------------------------------------------tacctactcagggtgattctgatacaggtggtccatgtagcccattttaagaaacactgGCCTTAAAATAAAAtgatagtacttgctcttaaaa--ttttttgtaagccaaaacc i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e saiBol1.JH378146 486718 4546 + 17725628 I a score=499178.000000 s hg38.chr3_KI270779v1_alt 178882 43 + 205312 ATCTCGCTGAAGTTGTCAGGCAGAGAAATTTGAAGCCTTGATC s panTro5.chr3 200165549 43 + 202621043 ATCTCGCTGAAGTTATAAGGCAGAGAAATTTGAAGGCTTGATC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122256 43 + 190779 ATCTCGCTGAAGTTATAAGGCAGAGAAATTTGAAGGCTTGATC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13040 43 - 189199 atctcgctgaagttgtaaggcagagaaatttgaagccctgatc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925197 43 + 123690457 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGCCTTGATC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506649 43 + 204787373 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113434 43 + 192460366 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598592 43 + 19675229 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530094 43 + 16847902 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461688 43 - 91754291 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTACTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645156 43 - 1977891 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500584 43 + 7796314 ATCTTGCTGAAGTTGTAAGGCAGAGAAATTTAAAGACTTAATC i colAng1.NW_012118932v1 C 0 I 309 s calJac3.chr17 972321 43 - 74750902 atcttgctgaagttgtaaggcatagaaatgtggagcctcgagc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 491264 43 + 17725628 atcttgctgaaGTTGTAAGGCATAGAAATGTGGAGCCTAGAGC i saiBol1.JH378146 I 4546 C 0 s cebCap1.NW_016107444v1 464618 43 - 6778120 AGCTTGCTGAAGTTGTAAGGCATAGAAATGTGGAGCCTTGAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 25005 42 - 3732694 ATCGTGCTGAAGTTGTAAGGCGTAGAAATGTCCAG-CTTGAGC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465477 42 - 608964 ATTTTACTGAAGTTATAAGACGTAGAAAT-TGGGGTCTTCATC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29101917 43 + 31377067 accttatcgaggttgtaaggcactgaaatttggagtcttgatc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3935257 43 + 6579706 atcttattgaagctgtaaggcacagaagttcggggtcttgacc i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I a score=1459309.000000 s hg38.chr3_KI270779v1_alt 178925 121 + 205312 AAGTTTTATTCTAAAAAATACTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGGCTCTCACCAGGAT----GCAAGTCAGGCCCTTCAGGTTCCGTCAGATTGTCA s panTro5.chr3 200165592 121 + 202621043 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAATGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAT----GCCAGTCAGGCCCTTCAGATTCCGTCAGATTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122299 121 + 190779 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAATGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAT----GCCAGTCAGGCCCTTCAGGTTCCGTCAGATTGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13083 121 - 189199 aagttttattcTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGGCTCTCACCAGGAT----GCAAGTCAGGCCCTTCAGGTTCCGTCAGATTGTCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925240 121 + 123690457 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAATGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAT----GCAAGGTAGGCCCTTCAGGTTCCATCAGATTGTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506692 121 + 204787373 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAC----GCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113477 121 + 192460366 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAC----GCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598635 121 + 19675229 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAC----GCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530137 121 + 16847902 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAC----GCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461731 121 - 91754291 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAC----GCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645199 121 - 1977891 AAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGAC----GCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 500936 120 + 7796314 AAGTTTTATTCTAAAAAATATTCATAGGCTTGTTCTTGCTGCTC-AGTGTTGGCCAGAATGAACTGACCTTGACTGTCACCAGGAT----GCAAGCCAGGCCCGTCAGGTTCCATCAGACTGTCA i colAng1.NW_012118932v1 I 309 C 0 s calJac3.chr17 972364 117 - 74750902 aagttttattcTAAAAAGTATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGGTAGAATGAACTGACCTTGACTTTCACCAGCAT----GCAAGCCAGGCCCGTCAGGTTCCATCCGTCA---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 491307 120 + 17725628 AAGTTTTATTCTAAAACGTATTCA-AGCCTTGTTCTTGCTGCTCAAGTGTGGGGTAGAATGAACTGACCTTGACTTTTACCAGCAT----GCAGGTCCCGCCCCTCGGGTTCCATCAGACAGTCA i saiBol1.JH378146 C 0 M 927 s cebCap1.NW_016107444v1 464661 120 - 6778120 AAGTTTTATTCTAAAAAGTATTCA-AGCCTTGTTCTTGCTGCTCAAGTGTTAGGTGGAATGAACTGACCTTGACTTTTACCAGCAG----GCAAGTCAGGCCCTTCAGGTTCCATCAGACAGTCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 25047 121 - 3732694 AAGTTTTATTCTAAAAAGTATTCATAGCCTTGTTCTTGCTGCTCCCGTGTTGGGTAGAATGAACTGACCTTGACTTTTACCGGCGT----GCAACTCAGGCCCTTCAGGTTCCGTCAGACAGTCA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465519 125 - 608964 AAGCTTTGTTCTAAAAAATCCTCCCAGGCTTGTTCTTATTGCTCAAGCATTTGCTGGAACGAACTAACCTTGACTTTTACCAGAATTAACGCAAGTCAGGCTCTTCAGGTTCCATCAGATTGTTA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29101960 117 + 31377067 aagcttgGTTCTCAGGA-TTTTCCCAGCCTTATTCTTGGTGCTCAAG-GTTTGCTGGAATGAACAGATCTTGTCGTTTACGAGA------GCACTCCCAGCTCCTCAGCTCCTAGCAGATTGTTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3935300 120 + 6579706 aagCTTAGTTCTTAAGAATTTTCCCAGCCTTGTTCCTGCTGTTCAAGC-TTTGTTGGAATGAGCTGGCCTTGTCTTTTACTAGAAT----GCAAATCAGGCTCTTCAGGTTCCATTAGATTGTTA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I a score=1194141.000000 s hg38.chr3_KI270779v1_alt 179046 131 + 205312 GACAACTGAAACTT---GTTCTCACTCTGGCCAAACG--------CA-T---AAACTTGGGGAGCAGAGAGCTGGGAGATTTGCGCCTAAAGAGTTGATATTGGAGAGAAACAG-------GTCTCTCCTCTC----------TCTTCTCTCCCCGTGACCCT s panTro5.chr3 200165713 134 + 202621043 GACAACCGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---AAACTTGCGAAGCAGAGAGCTGGGAGATTTGCGCGTAAAGAGTTGATATTGGAGAGAAACAG-------GTCTCTCCTCTC----------TCTTCTCTCCCTGTGACGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122420 134 + 190779 GACAACCGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---AAACTTGCGAAGCAGAGCGCTGGGAGATTTGCGCGTAAAGAGTTGATATTGGAGAGAAACAG-------GTCTCTCCTCTC----------TCTTCTCTCCCTGTGACGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13204 134 - 189199 GACAACTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---AAACTTGCGCAGCAGAGAGCTGGGAGATTTGTGCGTAAAGAGTTGATATTGGAGAGAAACAG-------GTCTCTCCTCTC----------TCTTCTCTCCTCGTGACACT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925361 134 + 123690457 GACAACTGAAACTTATTGTTCTCACTCTGGCCAAACG--------CA-T---AAACTTGCGGAGCAGAGAGCTGGGAGATTTGAGCGTAAAGAGTTGATACTGGAGAGAAACAG-------GTTTCTCCTCTC----------TCTTCTCTCCCTGTGACACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506813 125 + 204787373 GACAACTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATATTGGAGAAAAACAG-------GTCTCTC-------------------CTCTCCCCATGACACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113598 125 + 192460366 GACAACTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATACTGGAGAAAAACAG-------GTCTCTC-------------------CTCTCCCCATGACACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 598756 125 + 19675229 GACAACTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATACTGGAGAAAAACAG-------GTCTCTC-------------------CTCTCCCCATGACACT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530258 125 + 16847902 GACAGCTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATACTGGAGAAAAACAG-------GTCTCTC-------------------CTCTCCCCATGACACT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 461852 125 - 91754291 GACAACTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---ACACTTGCAGAGCAGACAACTGGGAGATTTGAGCGTCAAGAGTTGATATTGGAGAAAAACAG-------GTCTCTC-------------------CTCTCCCCATGACACT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645320 125 - 1977891 GACCACTGAAACTTACTGTTCTCACTCTGGCCAAACG--------CA-T---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATATTGGAGAAAAACAG-------GTCTCTC-------------------CTCTCCCCATGACACT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501056 134 + 7796314 GACAACGGAAACTTATTGTTCTCACTCTGGCCAAACG--------CA-C---AAACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTAAAGAGTTGATATTGGAGAAAAACAG-------GTCTCTCCTCTC----------TCCTCTCTCCCCGTGACACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972481 120 - 74750902 GACAATGGAAACTTATTGTTCTCACTCTGGCCAAATG--------CT-T---AAACCTGCAGAGCAGACAGCTGGGAAATTTAAGTG-------TTGGTATTGGAGAGAAACAG-------GTCTCTCTT-----------------CTCTCCCCATGACACT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464781 141 - 6778120 GACAACTGAAACTTATTGTTCTCACTCTGAATAAACGCTTAAACACT-T---AAACTTACGGAGCAGACAGCTGGGAGATTTAAGTGTAAAGACTTGGTATTGGAGAGAAACCGCTCCCTCCTCTCCCCT-----------------CTCTCCCCGTGAC-CC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 25168 124 - 3732694 GACAACTGAAAC---TTGTTCTCACTCTGGCCAAACG--------CT-T---CAGCTTGTGGAGCAGACAGCCGGGAGACTTGAGTGCAAAGACTTGGCATCGGAGAGAAACAG-------GTCTCTCCT-----------------CTCTCCCCACGACACT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465644 124 - 608964 GACAACTGAAGCTTGTCTTTCTCTCTTTGGCCAAATA--------CA-C---AAGTTTGCAGAGCAGAGAGCTGAGAGATTTGTCTACAAAGAGCTGATATTTGAGAGAAACAG-------GTTTCTCCTCTC--------------CTCTCTCT------TC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29102077 146 + 31377067 GACAACCAAGGCCTGTCGTTCTTGCCCTGGCCAAATC--------CA-TGACATATTTGCAGAGCTGAGAGCTATG-GATTTGACTGCGAAGAGCTGATATTTGAGAGAAATGG-------GTTTTTCCTCTCCTCTCCTCTCCCTCCTTTCTCTACGACAAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3935420 141 + 6579706 GACAGCTGATGCCCGTTGTTCTCACCC-ACCCAAATA--------CAGC---ATATTTGCAGAGCTGAGAGCTGGGAGATTTGAGTGTGAAGAGTTGGTATTTGAGAAAAG-AG-------GTTTGTTCTCCCTCTTTTCCTCTC--CTCTCCCCTTGACACT i dasNov3.JH569502 C 0 I 2023 e mm10.chr16 65461757 2469 - 98207768 I e saiBol1.JH378146 491427 927 + 17725628 M a score=538632.000000 s hg38.chr3_KI270779v1_alt 179177 58 + 205312 CCATTTTCTACTTCACTGAAAGAACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA s panTro5.chr3 200165847 58 + 202621043 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122554 58 + 190779 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13338 58 - 189199 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925495 58 + 123690457 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506938 55 + 204787373 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAATGC--- i rheMac8.chr2 C 0 I 3 s macFas5.chr2 113723 58 + 192460366 CCATTTTCTACTTCACTGAAAGGACCC---AAGCCATGCC-CTTCATCTCCTTCAATGCCCA i macFas5.chr2 C 0 I 59 s macNem1.NW_012014355v1 598881 55 + 19675229 CCATTTTTTACTTCACTGAAAGGACCC---AAGCCATGCC-CTTCATCTCCTTCAATGC--- i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 530383 58 + 16847902 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAACGCCCA i cerAty1.NW_012004056v1 C 0 I 58 s chlSab2.chr15 461977 58 - 91754291 CCATTTTCTACTTTACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAATGCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645445 58 - 1977891 CCATTTTCTACTTCACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAATGCCTA i manLeu1.NW_012102020v1 C 0 I 217 s colAng1.NW_012118932v1 501190 58 + 7796314 CGATTTTCTACTTCACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAACGCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972601 59 - 74750902 CCATTTTCTACGTCACTGAAAGGACCA---AAGCTATGCCACTTCCTCTCCTTCGATGTCCA i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464922 59 - 6778120 CCATTTTCTACGTCACTGAAAGGACCA---AAGCCATGCCACTTCCCCTCCTTCGACGTCCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 25292 59 - 3732694 CCATTTTCTACGTCACCGAAAGGACCA---AAGCCATGCCACTTCCCCTCCTTCGACGTCCA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465768 59 - 608964 CCATCTTCTACTTCCCTGAAAAGACCA---AAGCTGTCTAACATGATCTCCTTCATGGTCCC i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29102223 48 + 31377067 TCATCTTCTACATCACTGAAAAGACCATCTAA---------CTTGATCTACATC-----CCA i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e saiBol1.JH378146 491427 927 + 17725628 M a score=363743.000000 s hg38.chr3_KI270779v1_alt 179235 42 + 205312 GAGCCTTCT-CCGC--------------ACC---------------CTCCCCGGGGCCCCGG-----------------------------------GGCT----CCCTCC s panTro5.chr3 200165905 42 + 202621043 GAGCCTTCT-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122612 42 + 190779 GAGCCTTCT-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13396 42 - 189199 GAGCCTTCT-CCGC--------------ACC---------------CTCCCTGGGGCCCTGT-----------------------------------GGCT----CCCTCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925553 42 + 123690457 GAGCCTTCT-CCGC--------------ACC---------------CTCCCCAGGGCCCTGT-----------------------------------GGCT----CCCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202506996 42 + 204787373 GAGACTTCC-CCGC--------------ACC---------------CTCCCCAGGGCCCTGT-----------------------------------GGCT----CCCTCC i rheMac8.chr2 I 3 I 114 s macFas5.chr2 113840 42 + 192460366 GAGCCTTCC-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i macFas5.chr2 I 59 I 55 s macNem1.NW_012014355v1 598939 42 + 19675229 GAGACTTCC-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i macNem1.NW_012014355v1 I 3 I 55 s cerAty1.NW_012004056v1 530499 42 + 16847902 GAGCCTTCC-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i cerAty1.NW_012004056v1 I 58 C 0 s chlSab2.chr15 462035 42 - 91754291 GAGCCTTCC-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645720 42 - 1977891 GAGCCTTCC-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----CCCTCC i manLeu1.NW_012102020v1 I 217 C 0 s colAng1.NW_012118932v1 501248 42 + 7796314 GAGCCTTCC-CCGC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCT----GCCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972660 42 - 74750902 GAACCTTCT-CCAC--------------ACC---------------CTCCCCAGGGCCCTGT-----------------------------------GGCT----CCCTCC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 464981 41 - 6778120 GAACCTTCT-CCAC---------------CC---------------CTCCCCAGGACCCCGC-----------------------------------GGCT----CCCTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 25351 42 - 3732694 GAACCTTCT-CCAC--------------ACC---------------CTCCCCGGGGCCCTGT-----------------------------------GGCC----CCCGCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 465828 97 - 608964 GAACCTCCTCCCGC--------------CCCCGGAAGTATCTCTTTCTTCCCAGACCCCTATCTAACCTGAGAAGACAGGATAAACCTCCACTGAAGGGCTGTAGCCCTCC i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29102271 49 + 31377067 GAACCCTCT-CCACCAGGAAACATCTCGGCC---------------TTCACCAGGTCCCTCA--------------------------------------T----CC---- i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e saiBol1.JH378146 491427 927 + 17725628 M a score=90389.000000 s hg38.chr3_KI270779v1_alt 179277 28 + 205312 TG------------------------------------------------------------------CCCGG---ATGGCTCACTG------CTCTGC--------------------------------------CTCT- s panTro5.chr3 200165947 28 + 202621043 TG------------------------------------------------------------------CCGGG---ATGGCTCACTG------CTCTGC--------------------------------------CTCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122654 28 + 190779 TG------------------------------------------------------------------CCGGG---ATGGCTCACTG------CTCTGC--------------------------------------CTCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13438 28 - 189199 TG------------------------------------------------------------------CCCGG---ATGGCTCACTG------CTCTGC--------------------------------------CTCT- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925595 28 + 123690457 TG------------------------------------------------------------------CCCGG---ATGGCTCACTG------CTCTGC--------------------------------------CTCT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507152 27 + 204787373 TG------------------------------------------------------------------CCTGG---ATGGCTCActg------ctctgc--------------------------------------ctc-- i rheMac8.chr2 I 114 C 0 s macFas5.chr2 113937 27 + 192460366 TG------------------------------------------------------------------CCTGG---GTGGCTCActg------ctctgc--------------------------------------ctc-- i macFas5.chr2 I 55 C 0 s macNem1.NW_012014355v1 599036 33 + 19675229 TG------------------------------------------------------------------CCTGG---ATGGCTCActgctctgcctctgc--------------------------------------ctc-- i macNem1.NW_012014355v1 I 55 C 0 s cerAty1.NW_012004056v1 530541 27 + 16847902 TG------------------------------------------------------------------CCTGG---ATGGCTCActg------ctctgc--------------------------------------ctc-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462077 27 - 91754291 TG------------------------------------------------------------------CCTGG---ATGGCTCActg------ctctgc--------------------------------------ctc-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645762 27 - 1977891 TG------------------------------------------------------------------CCTGG---ATGGCTCActg------ctctgc--------------------------------------ctc-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501290 21 + 7796314 TG------------------------------------------------------------------CCCGG---ATGGCTCACTG--------------------------------------------------CTC-- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972702 92 - 74750902 -TGCCCCAATGGCTCACTCGTCCAGAACCTTCTCCACGCCCTCCCCAGGGCCCTGTGGCTCCCTCCTGCCCGG---ATGGCTCACTC------CTCGGC--------------------------------------CTC-- i calJac3.chr17 C 0 I 3 s cebCap1.NW_016107444v1 465022 22 - 6778120 -T------------------------------------------------------------------CCCAG---ATGGCT--CTC------CTCTGC--------------------------------------C---- i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018507959v1 25393 26 - 3732694 -G------------------------------------------------------------------CCCGG---CCGGCTCACTC------CTCCGC--------------------------------------CTC-- i aotNan1.NW_018507959v1 C 0 I 151 s otoGar3.GL873829 465925 44 - 608964 ----------------------CAGCGTCTTGTCTGCTCCC---------------------------CTTGG---ATGGCTCAACC------GGTCAC--------------------------------------CTC-- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29102320 70 + 31377067 -----------------------------------------------------TGC------------CCCAGACAATGGTCCGAAT------CTCTACCAAAAGGCTacacacacacacagacacacacagacacacTC-A i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e saiBol1.JH378146 491427 927 + 17725628 M a score=375748.000000 s hg38.chr3_KI270779v1_alt 179305 58 + 205312 -----GTGTCTCCGAC--GTTCTTTCTGCCTTT--------------------CTCCT---------TCTCTCCTGCCTGTGAGCATGTTCAGG s panTro5.chr3 200165975 58 + 202621043 -----GTGTCTCCGAC--GTTCTTTCTGCCTTT--------------------CTCCT---------TCTCTCCTGCCTGTGAGCATGTTTAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122682 58 + 190779 -----GTGTCTCCGAC--GTTCTTTCTGCCTTT--------------------CTCCT---------TCTCTCCTGCCTGTGAGCATGTTTAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13466 58 - 189199 -----GTGTCTGCGAC--GTTCTTTCTGCCTTT--------------------CTCCT---------TCTCTCCTGCCTGTGAGCATGTTTAGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925623 58 + 123690457 -----CTGTCTCCGAC--GCTCTTTCTGCCTTT--------------------CTCCT---------TCCCTTTTGCCTGTGAGCACGTTTAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507179 57 + 204787373 ------tgcctctgac--gctctttctgcctTT--------------------CTCCT---------TCTCTTTTGCCTGTGACCATGTTTAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 113964 57 + 192460366 ------tgcctctgac--gctctttctgcctTT--------------------CTCCT---------TCTCTTTTGCCTGTGACCATGTTTAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599069 57 + 19675229 ------tgcctctgac--gctctttctgcctTT--------------------CTCCT---------TCTCTTTTGCCTGTGACCATGTTTAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530568 57 + 16847902 ------tgcctctgac--gctctttctgcctTT--------------------CTCCT---------TCTCTTTTGCCTGTGACCATGTTTAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462104 57 - 91754291 ------tgcctctgac--gctctttctgcctTT--------------------CTCCT---------TCTCTTTTGCCTGTGACCATGTTTAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645789 57 - 1977891 ------tgcctctgac--gctctttctgcctTT--------------------CTCCT---------TCTCTTTTGCCTGTGACCATGTTTAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501311 57 + 7796314 ------TGCCTCTGAC--CCTCTTTCTGCCTTT--------------------CTCCT---------TCTCTTTCGCCTGTGACCATGTTTAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972797 55 - 74750902 -----CTGTCTCAGGT--G--CTTTCTGCCTTT--------------------CTCCT---------TCTCTTTCA-CTGTGAACATGTTCAGG i calJac3.chr17 I 3 C 0 s cebCap1.NW_016107444v1 465045 58 - 6778120 -----CTGTCTCAGGT--GCTCTTTCCGCCTTT--------------------CTCCT---------TCTCTTTTGCCTGTGAACATGTTCAGG i cebCap1.NW_016107444v1 I 1 I 111 s otoGar3.GL873829 465970 51 - 608964 ---------CTCTGCCCAAGTCTCTACGAATTG--------------------CTTCT---------TCTCCGCCAAC----ATAACATGTAG- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29102390 89 + 31377067 GGGCCTTGTCT---GC--TCCCTTTCTCCCTTCTCAGTTGGCTTAGCCCATCACTTCTCTCTGAGAGTCTCTTCTGCTGACAAACACATCTAGA i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25419 151 - 3732694 I e saiBol1.JH378146 491427 927 + 17725628 M a score=233760.000000 s hg38.chr3_KI270779v1_alt 179363 31 + 205312 TGTCTGTTGGCCTAAAACAA------------------------------GTCTGTCATCC s panTro5.chr3 200166033 31 + 202621043 TGTCTGTTGGCCTAAAACAA------------------------------GTCTGTCATCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122740 31 + 190779 TGTCTGTTGGCCTAAAACAA------------------------------GTCTGTCATCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13524 31 - 189199 TGTCTGTTGGCCTAAAACAA------------------------------GTCTGTCATCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925681 31 + 123690457 TGTCTCTTGGCCTAAAACAA------------------------------GTCTCTCATCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507236 31 + 204787373 TGTCTCTTGGCCTAAAACAA------------------------------GTCTCTCATCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114021 31 + 192460366 TGTCTCTTGGCCTAAAACAA------------------------------GTCTCTCATCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599126 31 + 19675229 TGTCTCTTGGCCTAAAACAA------------------------------ATCTCTCATCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530625 31 + 16847902 TGTCTCTTGGCCTAAAACAA------------------------------GTCTCTCATCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462161 31 - 91754291 TGTCTCTGGGCCTAAAACAA------------------------------GTCTCTCATCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645846 31 - 1977891 TGTCTCTTGGCCTAAAACAA------------------------------GTCTCTCATCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501368 31 + 7796314 TGTCTCTTGGCCTAAAACAA------------------------------GTCTCTCATCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972852 31 - 74750902 TGTCTCTGGGCCTAAAACAA------------------------------GTCTCTTGTCG i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 466021 61 - 608964 TATCTCTTGATCTAAAACAAAGGACTCATGggccagatgtggtggctcacatctgtaatcc i otoGar3.GL873829 C 0 I 300 s canFam3.chr33 29102479 31 + 31377067 TTTCTCTTGACCTAAAGTAA------------------------------GTCCTTCATCC i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25419 151 - 3732694 I e cebCap1.NW_016107444v1 465103 111 - 6778120 I e saiBol1.JH378146 491427 927 + 17725628 M a score=307782.000000 s hg38.chr3_KI270779v1_alt 179394 55 + 205312 GT---CTGTGTCCTCCTCGT------------------CCCTCCAGCAGCATGAAAGCCGGGCTTCCCCT-GCCGCC s panTro5.chr3 200166064 55 + 202621043 GT---CTGTGTCCTCCTCGT------------------CCCTCCAGCAGCGTGAAAGCCGGGCTATCCCT-GCCGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122771 55 + 190779 GT---CTGTGTCCTCCTCGT------------------CCCTCCAGCAGCGTGAAAGCCGGGCTATCCCT-GCCGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13555 55 - 189199 GT---CTGTGTCCTCCTCGT------------------CCCTCCAGCAGCGTGAAAGCCGGGCTTCCCCT-GCCGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925712 69 + 123690457 GT---CTGTGTCCTCATCCC----TGTCTTTTGTTTTGCCCTACAGCACCGTGAAAGCGGGGCTTCCCCT-GCCGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507267 73 + 204787373 GT---TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114052 73 + 192460366 GT---TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599157 73 + 19675229 GT---TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCATCCCCTCGCTGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530656 73 + 16847902 AT---TTGTGTCGTCCTCAT-CGCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462192 73 - 91754291 AT---TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCATCCCCTCGCTGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645877 73 - 1977891 GT---TTGTGTCGTCCTCAT-CGCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501399 73 + 7796314 AT---TTGTGTCGCCCTCAT-CCCTGTCTTCTGTTCTGCCCTCCAGCGCCGTAAAGGATGGGCTTCCCCTCACTGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972883 74 - 74750902 GTC--TTGTGTCCTCCGTGT-CCCAGTCTTTTGTTTTGCCCTCCAGTGCGGTGACAAAGGGCCTTCCCCTCACTGCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29102510 75 + 31377067 --ATCTTATGTCCCCCTTATGCCCTATCATTTATTTCACGCATGAGCATCCTGAAAGACAGGTCTACACTCTCCATC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 466082 300 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25419 151 - 3732694 I e cebCap1.NW_016107444v1 465103 111 - 6778120 I e saiBol1.JH378146 491427 927 + 17725628 M a score=76460.000000 s hg38.chr3_KI270779v1_alt 179449 9 + 205312 TCTTCTTTA s panTro5.chr3 200166119 9 + 202621043 TCTTCTTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122826 9 + 190779 TCTTCTTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13610 9 - 189199 TCTTCTTTA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925781 9 + 123690457 TCTTCTTTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507340 9 + 204787373 TCTTCTTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114125 9 + 192460366 TCTTCTTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599230 9 + 19675229 TCTTCTTTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530729 9 + 16847902 TCTTCTTTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462265 9 - 91754291 TCTTCTTTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645950 9 - 1977891 TCTTCTTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501472 9 + 7796314 TCTTCTTTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972957 9 - 74750902 TCTTCTTCC i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 466382 9 - 608964 TCCTCCTTG i otoGar3.GL873829 I 300 C 0 s canFam3.chr33 29102585 9 + 31377067 TCTTTTTTA i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25419 151 - 3732694 I e cebCap1.NW_016107444v1 465103 111 - 6778120 I e saiBol1.JH378146 491427 927 + 17725628 M a score=1183817.000000 s hg38.chr3_KI270779v1_alt 179458 137 + 205312 -------------CCACGCACTGCTCGCTCTGCCC-------------------------------CCACCTCACTCACTTCGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACAGCAAAAACGATTT---TCTCCAGTCCTCAC--GCGTCTC--ATCAGTTCGGCCCCATC----CAT s panTro5.chr3 200166128 137 + 202621043 -------------CCACGCACTGCTCGCTCTGCCC-------------------------------CCACCTCACTCACTTCGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACAGCAAAAACGATTT---TCTCCAGTCCTCAC--GCGTCTC--GTCAGTTCGGCCCCATC----CAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122835 137 + 190779 -------------CCACGCACTGCTCGCTCTGCCC-------------------------------CCACCTCACTCACTTCGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACAGCAAAAACGATTT---TCTCCAGTCCTCAC--GCGTCTC--GTCAGTTCGGCCCCATC----CAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13619 141 - 189199 -------------CCACGCACTGCTCTCTCTGCCC-------------------------------CCACCTCACTCACTTCGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACAGCAAAAACGATTT---TCTCCAGTCCTCAC--GCGTCTC--GTCAGTTCAGCCCcatccattcat i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925790 137 + 123690457 -------------CCAAGCGCTGCTCGCTCTGCCC-------------------------------CCACCTCAGTCACTTTACTCAAGCCA---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCACAAACGATTT---TCTCCAGTCCCTAC--GTGTCTC--CTCAGTTCAGCCCCATC----CAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507349 137 + 204787373 -------------CCACGCGCTGCTCGCCCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTT---TCTACAGTCCCCGC--GCGTCTC--GTAAATTCGGCCCCATC----CAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114134 137 + 192460366 -------------CCACGCGCTGCTCGCCCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTT---TCTACAGTCCCCGC--GCGTCTC--GTAAATTCGGCCCCATC----CAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599239 137 + 19675229 -------------CCACGCGCTGCTCGCCCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAACCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTT---TCTACAGTCCCCGC--GCGTCTC--GTAAATTCGGCCCCATC----CAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530738 137 + 16847902 -------------CCACGCGCTGCTCGCTCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTT---TCTACAGTCCCCGC--GCGTCTC--GTAAATTCGGCCCCATC----CAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462274 137 - 91754291 -------------CCACGCGCTGCTCGCTCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAGTCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTT---TCTACAGTCCCTGC--GCGTCTC--GTAAATTTGGCCCCATC----CAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 645959 137 - 1977891 -------------CTACGCGCTGCTTGCTCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTT---TCTACAGTCCCCCC--GCGTCTC--GTAAATTCGGCCCCATC----CAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501481 137 + 7796314 -------------CCACGCGCTGCTCGCTCTGCCC-------------------------------CCACCTCAGGCACTTGGCTCAAGCCG---------TTTTTCTCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAACCACAAGAACGATTT---TCTCCAGTCCCCGT--GCCTCTC--GTAAATTCGGCCCCATC----CAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 972966 136 - 74750902 -------------CTACGCACTGCTCACTCTG-CC-------------------------------CCACCTCAGTCACTTTGCTCAAGCTG---------TTTTCCTCAG-AGCTACCAGA------------------------ATCTCCTCC-CCAAGTGCAAAAACAATTT---TCTCCAGTCCCCAC--TCGTCTT--GTAAATTCAGCCCCATC----CAT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 465214 134 - 6778120 -------------CCACGCGCTGCTCGCTCTG-CC-------------------------------CCACCTCAGCCACTTCGCTCAAG--G---------ATTTCCGCAG-AGCTACCAGA------------------------ATCTCCTTC-CCAAGCGCAGAAACAATTT---TCTCCAGTCCCCAC--TTGTCTC--GTAAATTCAGCCCCATC----CAT i cebCap1.NW_016107444v1 I 111 I 241 s aotNan1.NW_018507959v1 25570 134 - 3732694 -------------CCACGCACCGCCCGCTCTG--C-------------------------------CCACCTCCGTCACTTCGCTCGAGCTA---------TCGTCCTCAG-AGCTACCAGG------------------------ATCTCCTTC-CCAAGCGCA-AAACAATTT---TCTCCAGTCCCCAC--TCGTCTC--GTAAATTCAGCCCCATC----CAT i aotNan1.NW_018507959v1 I 151 C 0 s otoGar3.GL873829 466391 173 - 608964 --------------TCCCTACCTTTTGTTTTGCCCTGGAGCATCTTGCAAGAGGGACTTGCTTACACCACCTCAACCACCTCACTGAAACCA---------CTTTCCACAGAAGTTACTAAA------------------------ATCTCCTTC-CTAACTACCAAAACCAATTCTCTCTTACGTCCTCATTGGCCTCTG--TGAAGTTTGGCCCCATC----CAT i otoGar3.GL873829 C 0 I 4 s canFam3.chr33 29102594 187 + 31377067 TCATCTATCTACTCCTTACATTCTGCCCTCCACCC-------------------------------CAACCCCACTCACCTCACCAAAAACAGTTTTAGTTTTTTCCTAAAAAGTTACTAAAAACCAAAAACAAAAAACAAAAAACAACTCCTTCTTCATCACCAAAAGCAATTT---TCTTCAGTCCCTGT--TAGTCTCTGTGAAATCTGGCATGATC----CAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e saiBol1.JH378146 491427 927 + 17725628 M a score=1023924.000000 s hg38.chr3_KI270779v1_alt 179595 146 + 205312 TCATTCATTCATGAATCTGACAGATGTGTATTGCGCCCCCCCCTCCACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCCTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACGCTCCCGGGCCctcc-----ac s panTro5.chr3 200166265 146 + 202621043 TCATTCATTCATGAATCTGACAGATGTGTATTGCGCGTCCCCCTCCACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCCTCATTGAAGCTGACGGGTCGTGCTCCACCGTCCACGTTCCCGGGCCCTCC-----AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 122972 146 + 190779 TCATTCATTCATGAATCTGACAGATGTGTATTGCGCGTCCCCCTCCACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCCTCATTGAAGCTGACGGGTCGTGCTCCACCGTCCACGTTCCCGGGCCCTCT-----AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13760 146 - 189199 tcattcattcatGAATCTGACAGACGTGTATTGCGTGCCCCCCTCCACGTGCTCTCCCTGGCCGGCGGCCCCATG----CCA-CCACCCAGCCCCACCCTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACGTTCCCGGGCCCTCC-----AC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120925927 146 + 123690457 TTATTCATTCATGAATCTGACAGATGTGTATTGTGCGCCCACCTCCCCGTGCTCTCCCTGGCCAGCGGCCCCGTG----CCA-CCACCCAGCTTCGCCCTCATTGAAGCTGACGGGTCCTGCTCCACTGTCCACGTTCCCGGGCCCTCC-----AC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507486 144 + 204787373 TTATTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCAGCCCCGTG----CCA-CCACCCAGCCTCACCTTCATTGAAGCTGACAGGTCCTGCTCCACCGTCCACTTTCCCGGGccctcc------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114271 144 + 192460366 TTATTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTCCCGGGccctcc------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599376 144 + 19675229 TTATTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTCCCGGGccctcc------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 530875 144 + 16847902 TTATTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTACCGGGccctcc------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462411 144 - 91754291 TTCTTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTCCCGGGCCCTCC------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646096 144 - 1977891 TTATTTGTTCATGAACTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCA-CCACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTCCCGGGCCCTCC------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 501618 149 + 7796314 TTATTCGTTCATGAATTTGACAGATGTGTATTGAGCCCCCACCTCAACGTGCTCTCCCTGGCCAGCGGCCCCGTG----CCA-CCACCCAGCCTCACCCTCCTTGAAGCTGACAGGTCCTGCTCCACCGTCCACTTTCCCGGGCCCTCCACTCC-- i colAng1.NW_012118932v1 C 0 M 1191 s calJac3.chr17 973102 141 - 74750902 -TCATCATTCATGTA-TGGACAGATGTGT-TTGAGTGCCCACCTCAATGTTCTCCCCCTGGCCAGCAGCCCCATGCTGTCCG-TCACCCAGCCTCCTCCTCATTG-AGCTAAAGGGTCCTGCTCCACCGTCCACTGTCCCTGGCCC---------- i calJac3.chr17 C 0 C 0 s aotNan1.NW_018507959v1 25704 148 - 3732694 -TTATCGTTCACGTATTGGGCAGATGTGTATGGAACACCCGCCTCGATGTTCTCCCCCGGGCCAGCAGCCCCAGGCCATCCG-TCACCCAGCCTCATCCTCACTG-AGCTGAAGCGTCCTGCTCCACCGTCCACTTTCCCTGGCCCTCC-----AC i aotNan1.NW_018507959v1 C 0 I 341 s otoGar3.GL873829 466568 139 - 608964 CGATCCATTCATTTATATAACAAGTATTTTTTGAGCACCTG--TCAATATACTCTCTGTGGTCAGTGTGCCTTTG----ACATTCGCCTAGTACTGCCCTCTCAGGAGTCAAGTGGCTCTTCTTGGCC--CCACCTTTCCCTGTCCT--------- i otoGar3.GL873829 I 4 C 0 s canFam3.chr33 29102781 132 + 31377067 Ccatctggtca--------acaagtatttattgagcgtccacATCAATGT--TCACCTCAGCCATTGTCCCCTTA----ATATCTGCATTACATTGTCTTCCTTGAAGCTGAACAATTCTGCTCATCCA-GCACTCTCCCCATTCCT--------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e cebCap1.NW_016107444v1 465348 241 - 6778120 I e saiBol1.JH378146 491427 927 + 17725628 M a score=5325.000000 s hg38.chr3_KI270779v1_alt 179741 3 + 205312 tcc s panTro5.chr3 200166411 3 + 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123118 3 + 190779 TCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13906 3 - 189199 TCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926073 3 + 123690457 TCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 973243 3 - 74750902 TCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29102913 3 + 31377067 TCT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 466707 0 - 608964 C e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e cebCap1.NW_016107444v1 465348 241 - 6778120 I e macNem1.NW_012014355v1 599520 0 + 19675229 C e saiBol1.JH378146 491427 927 + 17725628 M e colAng1.NW_012118932v1 501767 1191 + 7796314 M e manLeu1.NW_012102020v1 646240 0 - 1977891 C e chlSab2.chr15 462555 0 - 91754291 C e cerAty1.NW_012004056v1 531019 0 + 16847902 C e macFas5.chr2 114415 0 + 192460366 C e rheMac8.chr2 202507630 0 + 204787373 C a score=50515.000000 s hg38.chr3_KI270779v1_alt 179744 10 + 205312 actccccttg-- s panTro5.chr3 200166414 10 + 202621043 ACTCCCCTTG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123121 10 + 190779 ACTCCCCTTG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13909 10 - 189199 ACTCCCCTTG-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926076 10 + 123690457 ACTCCCCTTG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507630 10 + 204787373 attccccttg-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114415 10 + 192460366 attccccttg-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599520 10 + 19675229 attccccttg-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531019 10 + 16847902 attccccttg-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462555 10 - 91754291 ATTCCCCTTG-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646240 10 - 1977891 ATTCCCCTTG-- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973246 10 - 74750902 ACGCCCCATC-- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 466707 9 - 608964 -TGTCCCTCA-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29102916 10 + 31377067 --GCTCCCTGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e cebCap1.NW_016107444v1 465348 241 - 6778120 I e saiBol1.JH378146 491427 927 + 17725628 M e colAng1.NW_012118932v1 501767 1191 + 7796314 M a score=778782.000000 s hg38.chr3_KI270779v1_alt 179754 117 + 205312 ccacctctctccc-ccgctccacgccCAGATGACAT----------------GTCTCCAGccctttccctctcctgctgccc-----ctccctctcTGGCCACCCTGCGTCTACTCTCACGCCTTACAAATCTGTACTT s panTro5.chr3 200166424 117 + 202621043 CCACCTCTCTCCC-CCGCTCCGCGCCCAGATGACAT----------------GTCTCCAGccctttccctctcctgctgccc-----ctccctctcTGGCCACCCTGAGTCTACTCTCAGGCCTGACAAATCTGTACTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123131 117 + 190779 CCACCTCTCTCCC-CCGCTCCGCGCCCAGATGACAT----------------GTCTCCAGccctttccctctcctgctgccc-----ctccctctcTGGCCACCCTGCGTCTACTCTCAGGCCTTACAAATCTGTACTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 13919 117 - 189199 CCACCTCTCTCCC-CGGCTCCGCGCCCAGATGACAT----------------GTCTCCAGccctttccctctcctgctgccc-----ctccctctcTGGCCACCCTGCGTCTACTCTCACGCCTTACAAATCTGTACTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926086 117 + 123690457 CCACCTCTCTCCC-CCGCTCCGCGCCCAGATGACAC----------------GTCTCCAGCCGTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCATCTACTCTTACGCCTTACAAATCTGTGCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507640 117 + 204787373 ccgcctctctcct-cccctccAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114425 117 + 192460366 ccgcctctctcct-cccctccAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599530 117 + 19675229 ccacctctctcct-cccctccAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531029 114 + 16847902 ccgcctctctcct-cccctccAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCATCTACTCTTACGCCTTACAAATCTGTA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462565 118 - 91754291 CCGCCTCTCTCCTCCCCCTCCAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646250 117 - 1977891 CCGCCTCTCTCCT-CCCCTCCAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCC-----CTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973256 117 - 74750902 CCGCCTCCCTCC--CTACTCCGTGCCCAGATGGCGT---------------CGCCTCCAGCCCTTTCCCTCTCCTGCCGCCC-----CTCCCTCTCTGGCCACACTGCACCTACTCTTCTGCCTTACAAATCTGTACTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492356 85 + 17725628 CTGCCTCTCTCC--CCACTCCGTGCCCAGGCGGCAT---------------CGCCTCCAGCCCTT-----------------------TCCCTCTCTGGCCACACTGCATCCGCTTTTCTGC--------------CTT i saiBol1.JH378146 M 927 C 0 s otoGar3.GL873829 466716 138 - 608964 TTGCCTCACTTCT-CCCCTCTACCTCCAGATGAAGTCCTTCCTCCGGGTGTCCTCTCCAGCCCCTTCCCGCTCCTGCTTCCCTCCCTCTCCCTCTCTGGTGAAATCCCATCTACTCTTATGCCTTACAAATCTGTAGTT i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29102926 130 + 31377067 CGATTTctctttt-cttctcagcttccagatgaagtcggtcttctgggtgtcctctccagccttt--cctttctttctacac------tttctttctggctagactacatttactttcacaccttacaaatctataatt i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e cebCap1.NW_016107444v1 465348 241 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M a score=558258.000000 s hg38.chr3_KI270779v1_alt 179871 69 + 205312 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA s panTro5.chr3 200166541 69 + 202621043 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123248 69 + 190779 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14036 69 - 189199 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926203 69 + 123690457 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507757 69 + 204787373 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114542 69 + 192460366 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599647 69 + 19675229 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531143 69 + 16847902 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462683 69 - 91754291 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646367 69 - 1977891 -CTCCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973373 63 - 74750902 -CTTCCTGACTTCCCACCCA-GATGCCAGACTC-CCCTCTCCAGGATCTCCTGCCTCACTTAT-----GCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492441 48 + 17725628 -CTCCCTGACTT----------------------CCCTCCCCAGGGGTTCCTGCCTCGCTTACACCGAGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 465589 68 - 6778120 -CTCCCTAACTTCCCACCCA-GATGCCAGACTC-CCCTCCCCAGGATTTCCTGCCTCGCTCATGCAGTGCA i cebCap1.NW_016107444v1 I 241 I 223 s otoGar3.GL873829 466855 69 - 608964 -TACCCTGACTTCTCACCCC-AGTTCTAGATTCACCTTCCCAGTGACCTCCTGCCTCACTTATGCAGAGCA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29103056 71 + 31377067 ctaccctggcttcgcacccgtttttccagactcacctttccagtgatttcctggctggcctgtcaaatgca i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M a score=1317360.000000 s hg38.chr3_KI270779v1_alt 179940 214 + 205312 ACAGGTCCAGGTCAATCTTTCCTTGCAA--GCTT-----tcttccttccttctgttcatgctaacaacagtcccccagacatccagcccagaaa-gctgtgggtcc-tct-ggatttctttctcttccttgtcccctgtgtcctag--------tcagtactcgttgatcttcctcccaagtgttcaccccatcgcgtcctcttgtttgctttgccacatcctccccgtcgc s panTro5.chr3 200166610 214 + 202621043 GCAGGTCCAGGTCAATCTGTCCTTCCAA--GCTT-----TCTTCCTTCCTTCTGTTCATGCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTGTGGGTCG-TCT-GGATTTCTTTCTCTTCCTTGTCCCCAGTGTCCTAG--------TCAGTACTCGTTGATCCTCCTCCCAAGTGTTCACCCCATCGCGTCCTCTTGTTTGCTTTGCCACATCCTTCCCGTCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123317 214 + 190779 GCAGGTCCAGGTCAATCTGTCCTTCCAA--GCTT-----TCTTCCTTCCTTCTGTTCATGCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTGTGGGTCC-TCT-GGATTTCTTTCTCTTCCTTGTCCCCAGTGTCCTAG--------TCAGTACTCGTTGATCTTCCTCCCAAGTGTTCACCCCATCGCGTCCTCTTGTTTGCTTTGCCACATCCTTCCCGTCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14105 214 - 189199 ACAGGTCCAGGTCAAtctttccttccaa--gctt-----tcttccttccttcTGTTCATGCTAACAACAGTCCCCCAGATATCCAGCCCAGAAA-GCTGTGGGTCC-TCT-GGATTTCTTTCTCTTCCTTGTCCCCAGTGTCCTAG--------TCAGTACTCGTTGATCTTCCTCCCAAGTGTTCACCCCATCGCGTCCTCTTGTTTGCTTTGCCACATCCTCCCCGTCAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926272 214 + 123690457 ATGGGTCCAGGTCAATCTTTCCTTCCAA--GCTT-----TCTTCCTTCTTTCTGTTCATTCTAACAACGGTCCCCCAGACATCCATCCCAGAAA-GCTCTGGGTCC-TCT-GGATTTCTTTCTCTTCCTTGTCCCCAGGGTCCTAG--------TCAGTACAAGTTGCTCTTCCTCCCAAGTGTTTACCCCATCGCGTCCCCTTGTTTGCTTTGCCACAGCCTCCCTGTCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202507826 212 + 204787373 GCAGGTCCAGGTCAATCTTTCCTTCCAA--GCTT-----TCTTCCTTCCTTCTGTTCATTCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAG--------TCAGTACTAGCTGCTCTTCCT-CCAAGTGTTTG-CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCTCCCTGTCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114611 212 + 192460366 GCAGGTCCAGGTCAATCTTTCCTTCCAA--GCTT-----TCTTCCTTCCTTCTGTTCATTCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAG--------TCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG-CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCtccctgtcac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599716 212 + 19675229 GCAGGTCCAGGTCAATCTTTCCTTCCAA--GCTT-----TCTTCCTTCCTTCTGTTCATTCTAACAACAGTCCCCTAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAG--------TCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG-CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCTCCCTGTCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531212 212 + 16847902 GCAGGTCCAGGTCAATCTTTCCTTCCAA--GCTT-----TCTTCCTTCCCTCTGTTCATTCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-CGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAG--------TCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG-CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCTCCCTGTCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462752 212 - 91754291 GCAGGTCCAGGTCAAtctttccttccaa--gctt-----tcttccttccttctgttcattcTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAG--------TTGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG-CCCATCACGTCCTCTTGTTTGCTTTGCTACCTCCTCCCTGTCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646436 212 - 1977891 GCAGGTCCAGGTCAAtctttccttccaa--gctt-----tcttccttccttctgttcattcTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-CGATTTCTTCCTCTTCCTTGTTCCCAATGTCCTAG--------TCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG-CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCTCCCTGTCAC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973436 202 - 74750902 ACACATCCACGTCAAACTTGCCCTCCAG---------------CCTTCCTATTGTCAGTTCCATCAACAGTCCC--AGACATCCAGGCCAGAAA-GCTCTGGGTCCGCCT-CGATTTCTTTCTCCT---TGTCCCCCGTGTCATAG--------TTGGTAGTAGTTGCTATTCCTCCCAAGTGTTTACCCCATCACGTCCTCTTGTTCGCTTTGCCACATCCTCCCCATCAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492489 181 + 17725628 GCATGTCCAAGCCGAACTTTCCCTGCAG---------------CCTTCCTACCGTCAGTTCTATCAGCAGCCCC--AGACATCCAGGCCACGGA-GCTCTGGGTCCCCCT-CGATTCCTTTCTCCTTC-TGTCCCCAGTGTCGTCG--------TTGGAAGTAGTTGC-GTTCCTCCCAAGGGTTTACCCCGTCACG----------------------TCCTCCCCATCAG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 466924 225 - 608964 GTGTGTCCAAGTCAAACTTTACCTTGATCTGTTTCTCCATCTTCCTGCCTTCTGCTAATTGTAGCAACAGTCCCC-AGATATGTAGGCCAGAAA-CCTCT-GGTCA-TCT-TCAATTC--CCCCTTCCTTGTCCCTAACATCATTGATGAGCTTTTGGCACCAGCTATTATTCCTCCAAATTGTTTAAACCATCATGCCCTCTTGTCCCCTTAACCACATCACCCCTATTGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29103127 213 + 31377067 ------acacgccaaacttttcctcaaactgtttct---tctatcttccttaagttaattgtaacatcagtccctcaggtactcaggacagaaaccccctgagtca-tctctgattccatcctcttccttgtccccagcatcG-GT--------TTGGCACCAACGATTATCTCTCTGAATTATTGCTCCCATTGTGGTCTCTTGTTCACTTTGCTGTGTTAACCTTATTAC i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3935561 2023 + 6579706 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e cebCap1.NW_016107444v1 465657 223 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M a score=84994.000000 s hg38.chr3_KI270779v1_alt 180154 12 + 205312 tttgactactgc s panTro5.chr3 200166824 12 + 202621043 TTTGACTACTGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123531 12 + 190779 TTTGACTACTGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14319 12 - 189199 TTTGACTACTGC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926486 12 + 123690457 TCTGACTACTGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508038 12 + 204787373 TCTGACTATTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114823 12 + 192460366 tctgactattgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 599928 12 + 19675229 TCTGACTATTGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531424 12 + 16847902 TCTGACTATTGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462964 12 - 91754291 TCTGGCTATTGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646648 12 - 1977891 TCTGACTATTGC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973638 12 - 74750902 TCCGACCACTGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492670 12 + 17725628 TCCGACGTCTGC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 467149 6 - 608964 CCTGAC------ i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29103340 12 + 31377067 TCTGACCGATGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937584 12 + 6579706 TCTAactactgc i dasNov3.JH569502 I 2023 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e cebCap1.NW_016107444v1 465657 223 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M a score=64384.000000 s hg38.chr3_KI270779v1_alt 180166 13 + 205312 ggcagcctcctca s panTro5.chr3 200166836 13 + 202621043 GGCAGCCTCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123543 13 + 190779 GGCAGCCTCCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14331 13 - 189199 AGCAGCCTCCTCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926498 13 + 123690457 GGCAGCCTCCTCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508050 13 + 204787373 AGCAGCCTCCTCA i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 599940 13 + 19675229 AGCAGCCTCCTCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531436 13 + 16847902 AGCAGCCTCCTCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462976 13 - 91754291 AGCAGCCTCCTCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646660 13 - 1977891 AGCAGCCTCCTCA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973650 11 - 74750902 TGCTGCCTCCA-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492682 11 + 17725628 TGCCGCCTCCA-- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 467155 5 - 608964 --------CCTCA i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29103352 12 + 31377067 AGCAGCCTCTAA- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937596 13 + 6579706 agcagcctcttaa i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e cebCap1.NW_016107444v1 465657 223 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=195791.000000 s hg38.chr3_KI270779v1_alt 180179 28 + 205312 ctgcccctgctGACTCGGGTTCCG-CACC- s panTro5.chr3 200166849 28 + 202621043 CTGCCCCTGCTGACTCGGGTTCCG-CACC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123556 28 + 190779 CTGCCCCTGCTGACTCGGGTTCCG-CACC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14344 28 - 189199 CTGCCCCTGCTGACTCGGGTTCCG-CACC- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926511 28 + 123690457 CTGCCCCTGCTGACTCCGGTTCCA-CACC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508063 28 + 204787373 CTGCCCCTGCTGACTCCGGTTCCA-CAGC- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 599953 28 + 19675229 CTGCCCCTGCTGACTCCGGTTCCA-CAGC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531449 28 + 16847902 CTGCCCCTGCTGACTCCGGTTCCA-CAGC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 462989 28 - 91754291 CTGCCCCTGCTGACTCCGGTTCCA-CAGC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646673 28 - 1977891 CTGCCCCTGCTGACTCCGGTTCCA-CAGC- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973661 28 - 74750902 CTGCTCCTGCTGACTCTGGCTCCA-CACC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492693 28 + 17725628 CTGCTCCTGCGGACTCTGGCTCCA-CGGC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 465880 28 - 6778120 CTGCTCCTGCTGACTCTGGCTCCA-CACC- i cebCap1.NW_016107444v1 I 223 C 0 s otoGar3.GL873829 467161 29 - 608964 CTGCTCCCCTTGACCCCAGTTCTGCCAGC- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29103364 24 + 31377067 CTGCTCCTCTTGATT---GCTCCA-CTC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937609 29 + 6579706 ctgttcttactggttccaGTACAC-CCACT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 25852 341 - 3732694 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=233329.000000 s hg38.chr3_KI270779v1_alt 180207 32 + 205312 CCTGCTCT----CAGCCTCCACCGCACCCCTGTGG--G- s panTro5.chr3 200166877 32 + 202621043 CCTGCTCT----CAGCCTCCACCACACCCCTGTGG--G- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123584 32 + 190779 CCTGCTCT----CAGCCTCCACCACACCCCTGTGG--G- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14372 32 - 189199 CCTGCTCT----CAGCCTCCACCACACCCCTGTGG--G- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926539 32 + 123690457 CCTGCTCT----CAGCCTCCATCACACCCCTGTGG--G- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508091 32 + 204787373 CCTGCTCT----CAGCCTCCATCACACCCCTGTGG--G- i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 599981 32 + 19675229 CCTGCTCT----CAGCCTCCATCACACCCCTGTGG--G- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531477 32 + 16847902 CCTGCTCT----CAGCCTCCATCACACCCCTGTGG--G- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 463017 32 - 91754291 CCTGCTCT----CAGCCTCCATCACACACCTGTGG--G- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646701 32 - 1977891 CCTGCTCT----CAGCCTCCATCACACCCCTGTGG--G- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973689 31 - 74750902 CCTGCTCT----CAGCCTCCATGGCACCCCCGTGG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492721 31 + 17725628 CCTGCTCT----CAGCCTCCAACGCACCCCTGTGG---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 465908 32 - 6778120 GCCGCTCT----CAGCCTCCATCGCACCCCTGTGGG--- i cebCap1.NW_016107444v1 C 0 I 2 s aotNan1.NW_018507959v1 26193 32 - 3732694 CCTGCTCT----CAGCCTCCATCGCACCCCTGTGG-G-- i aotNan1.NW_018507959v1 I 341 I 2 s otoGar3.GL873829 467190 32 - 608964 TCCACTCT----GAGGTTCCCTCACACCACTGCCA--G- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29103388 22 + 31377067 CCTGCCTT----CACCCGCTGCTGGC------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937638 37 + 6579706 CTAACTCTGAGATAGCTTCCATCCCACCACTGCAG--GG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=102393.000000 s hg38.chr3_KI270779v1_alt 180239 20 + 205312 TTGATCCTCAGCTCTGAGGG s panTro5.chr3 200166909 20 + 202621043 TTGATCCTCAGCTCTGAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123616 20 + 190779 TTGATCCTCAGCTCTGAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14404 20 - 189199 TTGATCCTCCGCTCTGAGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926571 20 + 123690457 TTGATCCTCAGCTCTGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508123 20 + 204787373 TTGATCCTCAGCTCTCAGGG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600013 20 + 19675229 TTGATCCTCAGCTCTCAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531509 20 + 16847902 TTGATCCTCAGCTCTCAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 463049 20 - 91754291 TTGATCCTCAGCTCTCAGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 646733 20 - 1977891 TTGATCCTCAGCGATCAGGG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973720 3 - 74750902 -----------------GGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492752 3 + 17725628 -----------------GGA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 467223 20 - 608964 TTGATTTTCAACTATGGGGA i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29103410 20 + 31377067 TTGATCTTCAGCTATGGGAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937675 20 + 6579706 TTGATCTTCAGCTTTGTGGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 26225 2 - 3732694 I e cebCap1.NW_016107444v1 465940 2 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=624377.000000 s hg38.chr3_KI270779v1_alt 180259 85 + 205312 CCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCTCGAATTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG s panTro5.chr3 200166929 85 + 202621043 CCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCTCGAATTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123636 85 + 190779 CCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCTCGAATTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14424 85 - 189199 CCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCTCGAATTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926591 85 + 123690457 CCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCGCGAGTTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508143 84 + 204787373 CCAGGAGGGAGGGTTTCAGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGCCTG-CCTGCCTGCCCTGGAAGGTGTCTG i rheMac8.chr2 C 0 I 1 s macNem1.NW_012014355v1 600033 84 + 19675229 CCAGGAGGGAGGGTTTCAGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGCCTG-CCTGCCTGCCCTGGAAGGTGTCTG i macNem1.NW_012014355v1 C 0 I 1 s cerAty1.NW_012004056v1 531529 84 + 16847902 CCAGGAGGGAGGGTTTCGGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAACGGCCTG-CCTGCCTGCCCTGAAAGGTGTCTG i cerAty1.NW_012004056v1 C 0 I 1 s chlSab2.chr15 463069 85 - 91754291 CCAGGAGGGAGGGTTTCAGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG i chlSab2.chr15 C 0 I 67 s manLeu1.NW_012102020v1 646753 84 - 1977891 CCAGGAGGGAGGGTTTCGGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGCCTG-CCTGCCTGCCCTGAAAGGTGTCTG i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 973723 77 - 74750902 CCAGGAGGGAGAGTTTCTGCTGTTGTCTTCCTAGCTTGAATTACTTTGGAAAATGTCCTGCATTGCCCACCCTGGAA-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492755 76 + 17725628 CCCAGAGGGAGAGTTTCTGCTGTTGTCTTCCT-GCTTGAATTGCTTTGGAAAGCGTCCTGCATTGCCTGCCCTGGAA-------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 465942 75 - 6778120 CCAGGAGG--GAGTTTCTGCTGTTGTCTTCCTAGCTTGAATTGCTTTGGAAAATCTCCTGCATTGCCTGCCCTGGAA-------- i cebCap1.NW_016107444v1 I 2 C 0 s aotNan1.NW_018507959v1 26227 77 - 3732694 CCAGGAGGGAGAGTTTCTGCTGTCGTCTTCCCAGCTTGAATTGCTTTGGAAAACATCCTGCACCGCCTGCCCTGGAA-------- i aotNan1.NW_018507959v1 I 2 C 0 s otoGar3.GL873829 467243 72 - 608964 CCAGGAAAGAGAGTTT-------------CTCAGCAAGAATTGCTTTGGAAGGAGGCCTGTATTGCCTGCCCTGGAAGGCAGCAG i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29103430 75 + 31377067 CCACAAAGGAGAGTCTCT--CATCACTTCCTTAGCAGGGAT--CTTTGAGAGAATGCCTGTATTACCCTCCCTGGAAGG------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937695 80 + 6579706 CCAGGA---AGAATTTCTCCTATTGCTTCCCTAGCACG-ATCACTTTGAAAGAGTGGCTGGTATGACTGTCGTGGAAGGAGCTG- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=45479.000000 s hg38.chr3_KI270779v1_alt 180344 16 + 205312 -GTAGGTCCTGGGGTCA s panTro5.chr3 200167014 16 + 202621043 -GTAGGTCCTGGGGTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123721 16 + 190779 -GTAGGTCCTGGGGTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14509 16 - 189199 -GTAGGTCCTGGGGTCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926676 16 + 123690457 -GTAGGTCCTGGGATCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508228 16 + 204787373 -GTAGGTCCTGGGGCCA i rheMac8.chr2 I 1 I 4 s macNem1.NW_012014355v1 600118 16 + 19675229 -GTAGGTCCTGGGGCCA i macNem1.NW_012014355v1 I 1 I 4 s cerAty1.NW_012004056v1 531614 16 + 16847902 -GTAGGTCCTGGGGACA i cerAty1.NW_012004056v1 I 1 I 12 s manLeu1.NW_012102020v1 646838 16 - 1977891 -GTGGGTCCTGGGGCCA i manLeu1.NW_012102020v1 I 1 I 4 s otoGar3.GL873829 467316 14 - 608964 -TCAGATACTGAGGG-- i otoGar3.GL873829 I 1 C 0 s dasNov3.JH569502 3937775 16 + 6579706 CTCGGATCCAAAGGCA- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103505 0 + 31377067 C e aotNan1.NW_018507959v1 26304 0 - 3732694 C e cebCap1.NW_016107444v1 466017 0 - 6778120 C e calJac3.chr17 973800 0 - 74750902 C e saiBol1.JH378146 492831 0 + 17725628 C e colAng1.NW_012118932v1 501767 1191 + 7796314 M e chlSab2.chr15 463154 67 - 91754291 I e macFas5.chr2 114835 0 + 192460366 C a score=14786.000000 s hg38.chr3_KI270779v1_alt 180360 26 + 205312 CAGACT---GGTGACTGGCATTGGTCCTG s panTro5.chr3 200167030 26 + 202621043 CAGACT---GGTGACTGGCATTGGTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123737 26 + 190779 CAGACT---GGTGACTGGCATTGGTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14525 26 - 189199 CAGACT---GGTGACTGGCATTGGTCCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926692 26 + 123690457 GAGACT---GGTGACTGGCATTGGTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508248 28 + 204787373 TAGGTCCCGGGTGTCT-GCATAGGTCCTG i rheMac8.chr2 I 4 I 55 s macNem1.NW_012014355v1 600138 27 + 19675229 TAGGTCCC-GGTGTCT-GCGTAGGTCCTG i macNem1.NW_012014355v1 I 4 I 18 s manLeu1.NW_012102020v1 646858 28 - 1977891 TAGGTCCCAGGTGTCT-GCGTAGGTCCTG i manLeu1.NW_012102020v1 I 4 I 18 s otoGar3.GL873829 467330 14 - 608964 ---------------TAGAGTTCTCACTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29103505 5 + 31377067 CAGGC------------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937791 17 + 6579706 ---------CGGATCTAG---TTGTCTTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 26304 0 - 3732694 C e cebCap1.NW_016107444v1 466017 0 - 6778120 C e calJac3.chr17 973800 0 - 74750902 C e saiBol1.JH378146 492831 0 + 17725628 C e colAng1.NW_012118932v1 501767 1191 + 7796314 M e chlSab2.chr15 463154 67 - 91754291 I e cerAty1.NW_012004056v1 531630 12 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=1820.000000 s hg38.chr3_KI270779v1_alt 180386 1 + 205312 -G s panTro5.chr3 200167056 1 + 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123763 1 + 190779 -G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14551 1 - 189199 -G i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926718 1 + 123690457 -G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508331 1 + 204787373 -G i rheMac8.chr2 I 55 C 0 s macNem1.NW_012014355v1 600183 1 + 19675229 -G i macNem1.NW_012014355v1 I 18 C 0 s cerAty1.NW_012004056v1 531642 1 + 16847902 -G i cerAty1.NW_012004056v1 I 12 C 0 s manLeu1.NW_012102020v1 646904 1 - 1977891 -G i manLeu1.NW_012102020v1 I 18 C 0 s calJac3.chr17 973800 1 - 74750902 -G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492831 1 + 17725628 -G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 466017 1 - 6778120 -G i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 26304 1 - 3732694 -G i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3937808 1 + 6579706 T- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 467344 0 - 608964 C e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103510 0 + 31377067 C e colAng1.NW_012118932v1 501767 1191 + 7796314 M e chlSab2.chr15 463154 67 - 91754291 I e macFas5.chr2 114835 0 + 192460366 C a score=1229203.000000 s hg38.chr3_KI270779v1_alt 180387 195 + 205312 GTGTCTGCGTAGGTCCCGGGGGCGTGGGTCTAGTGGTC-------------AGAG-------ACTGGTGACTGGCATTG-----------------CCATTGTGACAC-----------------GGATGTCAGAAACCAGA--------------ATCCTCAGAGGGAGGCCACT-GGGCAAGAATGACCTTCGTCTGGTTGTGACTGAGGA--------AAGA-TAC--------TT-CCAGCGCGTCTGTGTGCG-TGGCAGGGTGGCTTCTGTAATAAG s panTro5.chr3 200167057 195 + 202621043 GTGTCTGCATAGGTCCCGGGGGCGTGGGTCTAGTGGTC-------------AGAG-------ACTGGTGACTGGCATTG-----------------CCATTGTGACAC-----------------GGATGCCAGAAACCAGA--------------ATCCTCAGAGGAAGGCCACT-GGGCAAGAATGACCTTCGTCTGGTTGTGACTGAGGA--------AAGA-TAC--------TT-CCAGCGCGTCTGTGTGCA-TGGCAGGGCGGCTTCTATAATAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123764 195 + 190779 GTGTCTGCATATGTCCCGGGGGCGTGGGTCTAGTGGTC-------------AGAG-------ACTGGTGACTGGCATTG-----------------CCATTGTGACAC-----------------GGATGCCAGAAACCAGA--------------ATCCTCAGAGGAAGGCCACT-GGGCAAGAATGACCTTCGTCTGGTTGTGACTGAGGA--------AAGA-TAC--------TT-CCAGCGCGTCTGTGTGCA-TGGCAGGGCGGCTTCTATAATAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14552 196 - 189199 GTGTCTGCGTAGGTCCCGGGGGCGTGGGTCTAGTGGTC-------------AGAG-------ACTGGTGACTGGCATTG-----------------CCATTGTGACAC-----------------GGATGCCAGAAACCAGA--------------ATCCTCAGAGGGAGGCCACT-GGGCAAGAAGGACCTTCGTCTGGTTGTGACTGAGGA--------AAGA-TAC--------TTCCCAGCGCGTCTGTGTGCA-TGGCAGGGTGGCTTCTATAATAAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926719 195 + 123690457 GTGTCTGCATAGGTCCTGGGGGCGTGGGTCTAGTGGTC-------------AGAG-------ACTGGTGACTGGCATTG-----------------TCATTGTGACAC-----------------GGATGCCAGAAACCAGA--------------ATCCTCAGAGGGAGGCCACT-GGGCAAGAACGACCTTCCTCTGGTTGGGACTGAGAA--------AAGA-TAC--------TT-CCAGCGCATCTGTGTGCA-TGGCAGGACAGCTTCTATAATAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508332 190 + 204787373 GTGTCTGCGTAGGTCCTGG------GGGTCTTGTGGTC-------------AGAG-------GCTGGTGACTGGCATTG-----------------CCGTTGTGACAC-----------------GGATGCCAGAAACCGGA--------------ATCCTCAGAGGGAGGCCGTT-GGGCCAGAATGACCTTCCTCCGGCTGTGACTGAGGA--------AAGAGGAC--------TT-CCAACGCGTCTGTGTGCACCTGCGGGGCAGCTTCCGTAAC-AG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600184 190 + 19675229 GTGTCTGCGTAGGTCCTGG------GGGTCTTGTGGTC-------------AGAG-------GCTGGTGACTGGCATTG-----------------CCGTTGTGACAC-----------------GGATGCCAGAAACCGGA--------------ATCCTCAGAGGGAGGCCGTT-GGGCCAGAATGACCTTCCTCCGGCTGTGACTGAGGA--------AAGAGGAC--------TT-CCAACGCGTCTGCGTGCACCTGCGGGGCAGCTTCTGTAAC-AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531643 197 + 16847902 GTGTCTGCACGGGTCCTGGGGGCATGGGTCTTGTGGTC-------------AGAG-------GCTGGTGACCGGCATTG-----------------CCGTTGTGACAC-----------------GGATGCCAGAAACCAGA--------------ATCCTCAGAGGGAGGCCGTT-GGGCCAGAATGACCTTCCTCCAGCTGTGACTGAGGA--------AAGAGGAT--------TT-CCAGCGCGTCTGTGTGCACCTGCAGGGCAGCTTCTGTAACAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 463221 189 - 91754291 GTGTCTGCATAGGTCCTGGGGGCATGGGTCTTGTGGTC-------------AGAG-------GCTGGTGACTGGCATTG-----------------CCGTTGTGACAC-----------------GGATGCCAGAAACCAGA--------------ATCCTCAGAGGGAGGCC---------AGAATGACCTTCCTCTGGTTGTGACTGAGGA--------AAGAGGAC--------TT-CCAGCGCATCTGTGTGCACCTGCAGGGCAGCTTCTGTAACAAG i chlSab2.chr15 I 67 C 0 s manLeu1.NW_012102020v1 646905 197 - 1977891 GTGTCTGCACAGGTCCTGGGGGCATGGGTCTTGTGGTC-------------AGAG-------GCTGGTGACTGGCATTG-----------------CCGTTGTGACAC-----------------GGATGCCAGAAACCGGA--------------ATCCTCAGAGGGAGGCCGTT-GGGCGAGAGTGACCTTCCTCCGGCTGTGACTGAGGA--------AAGAGGAT--------TT-CCAGCGCGTCTGTGTGCACCTGCAGGGCAGCTTCTGTAACAAG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973801 194 - 74750902 GTGCCTGTGTAGGTCCTGGGGACATGGGTCTCGCCGTT-------------GGAG-------GTGAGTGACTGGCATTG-----------------CCACTGTGACAT-----------------AGATGCAGGAGGTCAGAGTCCTGAGGTGTGTGTCCTCAGAGGGAGGCCACT-GGGTGAGCATGAGCTTCCTCTGGTTGTGACTGAGC----------AGAGTCC--------TT-CCAGTGTGTCTGTCTGC---------------TCTGCAACAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 492832 201 + 17725628 GTGCCTGCGTAGGTCCT-GGGACATGGGTCTCGTCGCT-------------GGAG-------GCGGGTGACTGGCACTG-----------------CCACTGTGACAT-----------------GGATGC-------CAGAGTCCTGAGGCGTGCGTCCTCAGAGGGAGGCCACT-GGGCAAGCACGACCTTCCTCCGGTTGTGACGGAGCA--------GAGAGTCC--------TT-CCAGCGCGTCTGTCTGCT-C-ACAGGACAGCTTCTGCCACAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 466018 210 - 6778120 GTGCCTGCGTAGGTCCTGGGGACATGGGTCTCGTCGTT-------------GGAG-------GTGGGTGACTGGCATTG-----------------CCACTGTGACAT-----------------CGATGCCGGAAGCCAGAGTCCTGAGGCGTGTGTCCTCAGAGGGAGGCCACT-GGGCGAGCACGACCTTCCTCTGGTTGTGACTGAGCA--------GAGAGTCC--------TT-CCAGTGCGTCTGTCTGCT-CTGCAGGACAGCTTCTGCGACAAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 26305 208 - 3732694 GTGCCTGCGCAGGTCCTGGGGACATGGGTCTCGTCGTT-------------GGAG-------GCGGGTGACTGGCATTG-----------------CCACTGTGACAT-----------------AGATGCCGGAAGCCAGAGTCCTGAGGCGTGTGTCCTCAGAGGGAGGCCACT-GGGCGAGCATGGGCTTCCTCTGGTTGTGACTGAGC----------AGAGTCC--------TT-CCAGTTCGTCTGCCTGCT-CTGCCGGACGGCTTCTGCAACAAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 467344 194 - 608964 ----------AGTTATCAGAGCCATGGA------------------------------------GGTTGACTGAAATTG-----------------CTTCTGTCACCCCCTTGCAACTGAAGTGAGGCTGGCAGAAACCAGAATCCTGAAGCACATCTCCCCAGAGGGAGGCCATT--GGTGTGACCAGGCTTCCTCAGGATGTGGCTGA--A--------AAGAGTCC--------TC-CCTCTGGCTCTGTCTGTG-CTGCAG----GCTTCTGTGGTAGG i otoGar3.GL873829 C 0 I 421 s canFam3.chr33 29103510 229 + 31377067 ------GCTTGGATCCTGAGGGCATGGGTCTAATTGTCTTATCAGGGTCATGAAG-------ACGAGTGACTGGAATCGTTCCTATCATCCTCTCACAACTGTGATAA-----------------GAAAATCAGGATCCTGA-------AGCAAGTGTCCTTAGGGGGAGGCTTTTTGGTTCTGGCTGATTCTCATC----TGTGGCTGAGAAGCATGTTCAATAGTCT--------TG-TCCTTAGGTCTATCTGTA-CTGTAGAGTGCTTCCTGGAGG--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3937809 207 + 6579706 ---------------------------------CAGAC-------------AGAGCAGGTGAACAAGTGACTGGAATTG--CTCCTCACTCCCTCACAGCTGTGATAA-----------------GGATGCCAGAAGCCAGGGTCCTGAAGTACATCTCCTCAGAGGAAGCCATTT-GGTTATGGCTGATCTTTTTCTTACTGTGGCTAAGAG--------AGGTGTCCAATAATTGTA-TCAATGGGTTTGTCTACA-CTGCAGGATGGTTTCTGTAATACG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=240754.000000 s hg38.chr3_KI270779v1_alt 180582 45 + 205312 AAATGG-----------------CCA-CGCCAAGGG------ATTTCT--CGTTTCTGCGGGAGACATTG--T------ s panTro5.chr3 200167252 45 + 202621043 AAATGG-----------------CCA-CGCCAAGGG------ATTTCT--CGTTTCTGCGGGAGACATTG--T------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 123959 45 + 190779 AAATGG-----------------CCA-CGCCAAGGG------ATTTCT--CGTTTCTGCGGGAGACATTG--T------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14748 45 - 189199 AAATGG-----------------CCA-CGCCAAGGG------ATTTCT--CGTTTCTGCGGGAGACATTG--T------ i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926914 47 + 123690457 AAATGG-----------------CCA-CACCAAGGG------ATTTCT--CGTTTCTGCGGGAGACATTGTCT------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508522 45 + 204787373 AAATGG-----------------CCA-CGCCAA-GG------ATTTCT--CATTTCTGC-GGAGACATTGTCT------ i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600374 45 + 19675229 AAATGG-----------------CCA-CGCCAA-GG------ATTTCT--CATTTCTGC-GGAGACATTGTCT------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531840 45 + 16847902 AAACGG-----------------CCG-CGCCAA-GG------ATTTCT--CGTTTCCGC-AGAGACATTGTCT------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 463410 45 - 91754291 AAATGG-----------------CCA-CGCCAA-GG------ATTTCT--CGTTTCTGC-GGAGACATTGTCT------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647102 45 - 1977891 AAACGG-----------------CCG-CGCCAA-GG------ATTTCT--CGTTTCTGC-GGAGACATTGTCT------ i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 973995 49 - 74750902 ATACTG-----------------CCA-CACTGAGGC------GTTTCTACACTTTCTGTGGGGGACATTGTCT------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493033 49 + 17725628 AAACGG-----------------CCA-TGCCACGGG------ATTTCTACAGTGTCTGTGGGAGACATCGTCT------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 466228 47 - 6778120 AAACGG-----------------CCA-CACCACGGG------ATTTCT--AGTTTCTGTGGGAGACATCGCCT------ i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 26513 47 - 3732694 AAACGG-----------------CCA-CGCCAAGGG------GTTTCT--AGTTTCTGTGGGAGACATCGTCT------ i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29103739 39 + 31377067 GAATGC-----------------CCATTACCAAGA---------------CGTTTCTGTTGGAGACATTGT-------- i canFam3.chr33 C 0 I 7 s dasNov3.JH569502 3938016 76 + 6579706 GAGTGACACTTACTGAGCCATTTCCA-CCATAAGGGTGGTTTAATCCT--ATGGTCTGTGGGAAACACTGTCTTCACTT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=136866.000000 s hg38.chr3_KI270779v1_alt 180627 18 + 205312 TCAGTTTtgtagccggca s panTro5.chr3 200167297 18 + 202621043 TCAGTTTtgtagccggca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124004 18 + 190779 TCAGTTTtgtagccggca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14793 18 - 189199 TCAGTTTtgtagccggca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926961 18 + 123690457 TTGGTTTtgtagctggca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508567 18 + 204787373 TCAGTTTtgcagccggca i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600419 18 + 19675229 TCAGTTTTGCAGCTggca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531885 18 + 16847902 TCAGTTTtgcagccggca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 463455 18 - 91754291 TCAGTTTTGCacccggca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647147 18 - 1977891 TCGGTTTtgcagccggca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 974044 18 - 74750902 TCAGTTTtgtagccggca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493082 18 + 17725628 TCAGGTTTGTGGCCggca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 466275 18 - 6778120 TCGGTTTtgtaggcagca i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 26560 18 - 3732694 TCAGTTTtgtagccggcg i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3938092 18 + 6579706 TAAGTTCTAGAGTTGACA i dasNov3.JH569502 C 0 I 367 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103778 7 + 31377067 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=653138.000000 s hg38.chr3_KI270779v1_alt 180645 98 + 205312 gcttaaattcaaaatgcattttaaacatgttttcccctttctcttgggtttccaaatacaaccttgaggcagctgcaaaggccgttttcctcagccta s panTro5.chr3 200167315 98 + 202621043 gcttaacttcaaaatgcattttaaacatgttttcccctttctcttgggtttccaaatacaaccttgaggcaactgcaaaggccgttttcctcagccta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124022 98 + 190779 gcttaacttcaaaatgcattttaaacatgttttcccctttctcttgggtttccaaatacaaccttgaggcaactgcaaaggccgttttcctcagccta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14811 98 - 189199 gcttaacttcaaaatgcattttaaacatgttttgccctttctcttgggtttccaaatacaaccttgaggcaactgcaaaggccattttcctcagccta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120926979 98 + 123690457 gcttaacttcaaaatgcattttaaacatgttttcccctttcccttgggtttccaagtataaccttgaggcaactgcaaaggccgttttcctcagccta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508585 97 + 204787373 gtttaccttcaagatgcattttaaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagccta i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600437 97 + 19675229 gtttaccttcaagatgcattttaaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagccta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 531903 97 + 16847902 gtttaccttcaagatgcattttaaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagccta i cerAty1.NW_012004056v1 C 0 I 1521 s chlSab2.chr15 463473 97 - 91754291 gtttaccttcaaaatgcattttaaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagccta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647165 97 - 1977891 gtttaccctcaaaatgcattttcaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagccta i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 974062 96 - 74750902 gcttaacttcaacatacattttaaa--ccttttcccctttctcttgggtttctaaatacaaccttgaggcaactgcaaaggcctttttcctctgcctt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493100 96 + 17725628 gcttaacttcaacattcattttaaa--ctttttcccctttctcttgggtttctaaatacaaccttaaggcaactgcaaaggcctttttcctcagcctt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 466293 96 - 6778120 gcttaacttcaacatacattttaaa--ctttctcccctttcccttgggtttctaaatacaaccttaaggcaacggcgaaggcctttttcctcagcctt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 26578 96 - 3732694 gcttaacttcaacatacattttaaa--ctgtttcccctttctcttgggtttctaaatacaaccttaaggcaactgcaaaggcctttttcctcagcctt i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e macFas5.chr2 114835 0 + 192460366 C a score=136904.000000 s hg38.chr3_KI270779v1_alt 180743 29 + 205312 aaaatagacttcacgc-------------------------------------------------------------ccctcccttttct s panTro5.chr3 200167413 90 + 202621043 aaaatagacttcacactccctccctcttctcaccgtctgtacacactccctccCTTTTCTTGTCGTCTGTACACACTCCCTCCCTCTTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124120 30 + 190779 aaaatagacttcacac------------------------------------------------------------tccctccctcttct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14909 29 - 189199 aaaatagacttcacgc-------------------------------------------------------------ccctcccttttct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927077 29 + 123690457 aaaatagactccacgc-------------------------------------------------------------tcctcccttttct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508682 29 + 204787373 gaaatagactccatgc-------------------------------------------------------------ccctcccttttct i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600534 29 + 19675229 gaaatagactccacgc-------------------------------------------------------------ccctcccttttct i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 463570 29 - 91754291 aaaatggactccacgc-------------------------------------------------------------ccctcccttttct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647262 29 - 1977891 gaaatagactccacgc-------------------------------------------------------------ccctcctttttct i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 974158 29 - 74750902 aaaatacgctccacgc-------------------------------------------------------------ccctcccttttct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493196 29 + 17725628 aaaatacatgccacgc-------------------------------------------------------------acctccctcttct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 466389 28 - 6778120 aaaatacact-catgc-------------------------------------------------------------acctcccttttct i cebCap1.NW_016107444v1 C 0 I 750 s aotNan1.NW_018507959v1 26674 29 - 3732694 aaaatacactccacac-------------------------------------------------------------ccctcccttttct i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=12727.000000 s hg38.chr3_KI270779v1_alt 180772 3 + 205312 cac s panTro5.chr3 200167503 3 + 202621043 CAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124150 3 + 190779 cac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14938 3 - 189199 cat i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927106 3 + 123690457 cac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508711 3 + 204787373 cgc i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600563 3 + 19675229 cgc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 463599 3 - 91754291 cgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647291 3 - 1977891 cat i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 974187 3 - 74750902 cac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493225 3 + 17725628 cgc i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 26703 3 - 3732694 cac i aotNan1.NW_018507959v1 C 0 I 596 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=20261.000000 s hg38.chr3_KI270779v1_alt 180775 9 + 205312 gatctgtac s panTro5.chr3 200167506 9 + 202621043 CGTCTGTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124153 9 + 190779 cgtctgtac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14941 9 - 189199 gatctgtac i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927109 9 + 123690457 gatctgtat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508714 9 + 204787373 cgcctgtat i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 600566 9 + 19675229 cgcctgtat i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 463602 9 - 91754291 cgtctgtat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647294 9 - 1977891 tgcctgtgt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 974190 9 - 74750902 tgtgcatat i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493228 9 + 17725628 cgtacgtaa i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e colAng1.NW_012118932v1 501767 1191 + 7796314 M e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=79263.000000 s hg38.chr3_KI270779v1_alt 180784 29 + 205312 acactccctccCT------------------------------CTTCTCACCGTCTGTA s panTro5.chr3 200167515 59 + 202621043 ACACTCCCTCCCTTTTCTTGTCGTCTGTACACACTCCCTCCCTCTTCTCACCGTCTGTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124162 29 + 190779 acactccctccCT------------------------------TTTCTTGTCGTCTGTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14950 29 - 189199 acactccctccCT------------------------------CTTCTCACCGTCTGTA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927118 55 + 123690457 acactccctccttcttctcaccgtctgTATACACTCCCT----TTTCTCACCGTCTGTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202508723 29 + 204787373 acaccccctccCT------------------------------TTTCTCGCCGCCTGTA i rheMac8.chr2 C 0 I 587 s macNem1.NW_012014355v1 600575 29 + 19675229 acaccccctccCT------------------------------TTTCTCGCCGTCTGTA i macNem1.NW_012014355v1 C 0 I 579 s chlSab2.chr15 463611 29 - 91754291 ataccccctccct------------------------------tttctcgccatctgta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647303 28 - 1977891 aca-cccctccct------------------------------tttctcGCCGTCTGTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 502971 29 + 7796314 ACACCCCCTCCCT------------------------------TTTCTCGCCGTCTGTG i colAng1.NW_012118932v1 M 1191 C 0 s calJac3.chr17 974199 15 - 74750902 acactcccttcca------------------------------gt-------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493237 15 + 17725628 actctcccttcca------------------------------tt-------------- i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=28740.000000 s hg38.chr3_KI270779v1_alt 180813 11 + 205312 CACACTCCCTC s panTro5.chr3 200167574 11 + 202621043 CACACTCCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124191 11 + 190779 CACACTCCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 14979 9 - 189199 CACACT--CTC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927173 11 + 123690457 TACACTCCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202509339 11 + 204787373 TACACCCCCTC i rheMac8.chr2 I 587 C 0 s macNem1.NW_012014355v1 601183 11 + 19675229 TACACCCCCTC i macNem1.NW_012014355v1 I 579 C 0 s chlSab2.chr15 463640 11 - 91754291 tacACTCCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 647331 10 - 1977891 TACACCCCTC- i manLeu1.NW_012102020v1 C 0 I 925 s colAng1.NW_012118932v1 503000 11 + 7796314 TACACCCCCTC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e calJac3.chr17 974214 0 - 74750902 C e saiBol1.JH378146 493252 0 + 17725628 C e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=149165.000000 s hg38.chr3_KI270779v1_alt 180824 43 + 205312 ccttttcttgtcatctgtatacactccctcccttttcttactg s panTro5.chr3 200167585 43 + 202621043 CCTTTTCTTGTCGTCTGTATACACTCCCTCCCttttcttactg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124202 43 + 190779 CCTCTTCTCACCGTCTGTACACACTCCCTCCCTTTTCTTGTCG i panPan2.chrUn_NW_014024201v1 C 0 I 177 s gorGor5.CYUI01000254v1 14988 43 - 189199 CCTCTTCTCACCGTCTGTACACACTCCCTCccttttcttactg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927184 43 + 123690457 CCTTTTCTCGCCATCTGTATACACTCCCTCccttttctcacca i nomLeu3.chr11 C 0 I 32 s rheMac8.chr2 202509350 43 + 204787373 CCTTTTCTCGCCGTCTGTATACACtccctcccttttctcgcca i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 601194 43 + 19675229 CCTTTTCTCGCCGTCTGTATACACtccctcccttttctcgcca i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 463651 43 - 91754291 CCTTTTCTTATTGCCTGTATACACCCCCTCCCTTTTCTCATTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648266 43 - 1977891 CCTTTTCTCGCCATCTGTATATACtccctcccttttctcgcca i manLeu1.NW_012102020v1 I 925 C 0 s colAng1.NW_012118932v1 503011 43 + 7796314 CCTTTTCTCGCCGTCTGTGTACACCccctcccttttctcacca i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e calJac3.chr17 974214 0 - 74750902 C e saiBol1.JH378146 493252 0 + 17725628 C e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=20187.000000 s hg38.chr3_KI270779v1_alt 180867 5 + 205312 tctgt s panTro5.chr3 200167628 5 + 202621043 tctgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124422 5 + 190779 tctgt i panPan2.chrUn_NW_014024201v1 I 177 C 0 s gorGor5.CYUI01000254v1 15031 5 - 189199 tctgt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927259 5 + 123690457 tctgt i nomLeu3.chr11 I 32 C 0 s rheMac8.chr2 202509393 5 + 204787373 tctgt i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 601237 5 + 19675229 tctgt i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 463694 5 - 91754291 CCTGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648309 5 - 1977891 tctgt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503054 5 + 7796314 tctgt i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e calJac3.chr17 974214 0 - 74750902 C e saiBol1.JH378146 493252 0 + 17725628 C e cerAty1.NW_012004056v1 532000 1521 + 16847902 I e macFas5.chr2 114835 0 + 192460366 C a score=49125.000000 s hg38.chr3_KI270779v1_alt 180872 20 + 205312 atatactcccttccattt--------------------------------ct s panTro5.chr3 200167633 52 + 202621043 atatactcccttccatttatctcaccatctgtatatactcccttccatttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124427 20 + 190779 atatactcccttccattt--------------------------------ct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15036 52 - 189199 atatactcccttccatttatctcaccatctgtatacactcccttccatttct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927264 20 + 123690457 atacactcccttccattt--------------------------------ct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202509398 20 + 204787373 atacactcccttccattt--------------------------------ac i rheMac8.chr2 C 0 I 4 s macFas5.chr2 114835 20 + 192460366 atacactcccttccattt--------------------------------ac i macFas5.chr2 C 0 I 4 s macNem1.NW_012014355v1 601242 20 + 19675229 atacactcccttccattt--------------------------------ac i macNem1.NW_012014355v1 C 0 I 4 s chlSab2.chr15 463699 20 - 91754291 GTACACCCCCTCCCTTTT--------------------------------CT i chlSab2.chr15 C 0 I 633 s manLeu1.NW_012102020v1 648314 20 - 1977891 atacacccccttccattt--------------------------------ac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503059 20 + 7796314 atacacttccttccattt--------------------------------ac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974214 7 - 74750902 -------------catct--------------------------------aa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493252 7 + 17725628 -------------cgtct--------------------------------ga i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e cerAty1.NW_012004056v1 532000 1521 + 16847902 I a score=173273.000000 s hg38.chr3_KI270779v1_alt 180892 32 + 205312 ctgcgtgcgaggatcgaattatat--gtcttcct s panTro5.chr3 200167685 32 + 202621043 ctgcgtgcgaggatcgaattatgt--gtcttcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124447 32 + 190779 ctgcgtgcgaggatcgaattatgt--gtcttcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15088 32 - 189199 ctgcgtgcgaggatcaaattatgt--gtcttcct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927284 32 + 123690457 ctgtgtgcgaggatcgaattatgt--gtcttcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202509422 34 + 204787373 ctatgtgcgaggattgaactatgtgggtcttcct i rheMac8.chr2 I 4 C 0 s macFas5.chr2 114859 34 + 192460366 ctatgtgcgaggattgaactatgtgggtcttcct i macFas5.chr2 I 4 C 0 s macNem1.NW_012014355v1 601266 34 + 19675229 ctatgtgcgaggattgaactatgtgggtcttcct i macNem1.NW_012014355v1 I 4 C 0 s chlSab2.chr15 464352 32 - 91754291 ctatgtgcgaggattgaactgtgt--gtcttcct i chlSab2.chr15 I 633 C 0 s manLeu1.NW_012102020v1 648334 32 - 1977891 ctatgtgcgaggattgaactatgt--gtcttcct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503079 32 + 7796314 ctatgtgcgaggatcgaactatgt--gtcttcct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974221 32 - 74750902 ctggatgcaaggagctaattatgt--atcttcct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493259 32 + 17725628 ctggacgcgaggagataattacgt--atcttccc i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I e cerAty1.NW_012004056v1 532000 1521 + 16847902 I a score=1736825.000000 s hg38.chr3_KI270779v1_alt 180924 221 + 205312 aaaagttgcaggggctaaaaccttgagagagacaaaccacatctgaaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaat-aatgtcagccagaggtccggac-ggactgggacccagaagagccaccagaacaagacatgcggacacaggactcagcccgattcttgcgtgccttccttatcaaggcttt--------------------cccctctgaaaatt s panTro5.chr3 200167717 241 + 202621043 aaaagttgcaggggctaaaaccttgaaagagacaaaccacatctgaaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaat-aatgtcagccagaggtccggac-ggactgggacccagaagagccaccagaacaagacatgcggacacaggactcagcccgattcttgcgtgccttccttatcaaggctttactttggaaacccaggctttcccctctgaaaatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124479 241 + 190779 aaaagttgcaggggctaaaaccttgaaagagacaaaccacatctgaaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaat-aatgtcagccagaggtccggac-ggactgggacccagaagagccaccagaacaagacatgcggacacaggactcagcccgattcttgcgtgccttccttatcaaggctttcctttggaaacccaggctttcccctctgaaaatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15120 240 - 189199 aaaagttgcaggggctaaaaccttgaaagagacaaaccacatctgaaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------tcgttaaaat-aatgtcagccagaggtccagat-ggactgggacccagaagagccaccagaacaagacatgcggacacaggactcagcccgattcttgcgtgccttccttatcaaggctttcctttggaaacccaggctt-cccctctgaaaatt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927316 221 + 123690457 aaaagtttcaggggctaaaaccttgaaagagacaaaccacatctggaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaat-aatgtcagcccgaggtccagac-ggactgggacccaaaagagccaccagaacaagacacaccgacacaggactcagcccgattctcgtgtgccttccttatcaaggcttt--------------------cccctctgaaaatc i nomLeu3.chr11 C 0 I 305 s rheMac8.chr2 202509456 256 + 204787373 aaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattacttcatgacaactccttaaaatccggccgttgttaaaat-aatgtcagctcgaggtccagac-ggactgggacccaaaagagccaccagaacaagacacatggacacaggactcagcccaattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 114893 256 + 192460366 aaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattactttatgacaactccttaaaatccggccgttgttaaaat-aatgtcagctcgaggtccagac-ggactgggacccaaaagagccaccagaacaagacacgtggacacaggactcagcccgattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601300 256 + 19675229 aaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattactttatgacaactccttaaaatccggccgttgttaaaat-aatgtcagctcgaggtccagac-ggactgggacccgaaagagccaccagaacaagatacgtggacataggactcagcccgattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 533521 256 + 16847902 aaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattacttcatgacaactccttaaaatccggccgttgttaaaat-aatgtcagctcgaggtccagat-ggactgggacccaaaagagccaccagaacaagacacgtggacacaggactcagcccgattcttgcgcgccttccttatcaaggctttcccttggaaacccatgcattcccctctgaaaatt i cerAty1.NW_012004056v1 I 1521 C 0 s chlSab2.chr15 464384 256 - 91754291 aaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattacttcatgacaactccttaaaatccggccgttgttaaaat-aatgtcagctcaaggtccagac-ggactgggacccaaaagagccaccagaacaagacacgtggacacaggactcagcccgattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648366 256 - 1977891 aaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacctagctgcaaaatcccagaaattacttcatgacaactccttaaaatccggccgttgttaaaat-aatgtcagctcgaggtccagac-ggactgggacccaaaagagccaccagaacaagacacgtggacacaggactcagcccgattcttgcgtgccttcgttatcaaggctttcccttgggaacccatgctttcccctctgaaaatt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503111 257 + 7796314 aaaagtttcaagggctaaaatcttgaaagagacaaaccatatctggaaacctatctgcaaaatcccagaaattacttcaagacagctccttaaaatccggccgttgttaaaataaatgtcagcgcgaggtccagac-ggactgggacccaaaagagccaccagaacaagacacgtggatgcaggactcagcccgattcttgcgcgccttccttatcaaggctttcctttggaaacccatgctttccccgctgaaaatt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974253 254 - 74750902 gaaagtttcaggggct--aatcttgaaagagacaagccacatctggaaatccagctgcaatattccagaaattgcttcaagacagctcattcaaatccagccattatcaaaat-aatgtcagcctgaggtccagac-ggaccgggacctgaaagagccaccagaacaagacacgcgggcacaagactcagcccaatttttacatgacttccttatccagattctcctttctaaacccgtgctttcccctctgaaaatt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493291 254 + 17725628 aaaagtttcaggggct--ggtcttgaaagagacaaaccacatctggaaatccagctgcgatattccagaaattacttccacacagctcagtcaaatccagccattattaaaat-aatgtcagcctgaggtccagatggggccgggacccaaaagagccgccagagcccaacacgtgggcacaggactcagcctgactcctacctgccttccttactgaggctttccttt-gaaacccgtgctttcccctccgaaaatc i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I a score=801801.000000 s hg38.chr3_KI270779v1_alt 181145 156 + 205312 aaagcagctactttaagtagaaatctggctgcttcccctttactagttttggttaataaattcacgttcttcctaccagaccttaTGAATTAAACTATCCGTTTAATATAATATAAACTCTCTGCAAGCAGCGAGAGCCTCCGCATCTGCGCTGGG s panTro5.chr3 200167958 156 + 202621043 aaagcagctactttaagtagaaatctggctgcttcccctttactagttttggttaataaattcacgttcttcctaccagaccttaTGAATTAAACTATCCGTTTGATATAATATAAACTCTCTGCAAGCAGCGAGAGCCTCCGCATCGGCGTTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124720 156 + 190779 aaagcagctactttaagtagaaatctggctgcttcccctttactagttttggttaataaattcacgttcttcctaccagaccttaTGAATTAAACTATCCGTTTGATATAATATAAACTCTCTGCAAGCAGCGAGAGCCTCCACATCGGCGTTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15360 156 - 189199 aaagcagctactttaagtagaaatctggctgcttcccctttactagttttggttaataaattcacgttcttcctaccagaccttatgaattaaactatccgtttaatataatataaactctctgcaagcagcgagagcctccgcatctgcgttGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927842 130 + 123690457 aaagcagctactttaagtagaaatctggctgcttccccttcactag-tttggttaataaattcactttcttcttaccagaccttatgaattaaa-------------------------ctcggtaagcagcgagagcctctgcatctgcgttGGG i nomLeu3.chr11 I 305 C 0 s rheMac8.chr2 202509712 122 + 204787373 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcGTGGATTA---------------------------------AGGCAGCGTG-GCCTCTGCATCTGTGCTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115149 130 + 192460366 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GGCTCTGCATCTGTGTTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601556 130 + 19675229 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GGCTCTGCATCTGTGTTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 533777 130 + 16847902 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GCCTCTGCATCTGTGTTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 464640 130 - 91754291 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GCCTCTGCATCTGTGTTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648622 130 - 1977891 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GCCTCTGCATCTGTGTGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503368 112 + 7796314 aaagcagctacttgaagtagaaatctggctgcttcccctttactagttttggttaataaattcactttcttcctaccagacctggtgaattaaa--------------------------------------------ctctgcaTCTGTGTTGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974507 107 - 74750902 aaagctgctactttcagtagaaatctggctgcttcacctttagtggttttggttaacaaattcgcctgcttcctaccggaccttgttaattaaa-------------------------ctcc-----------g-GAGTTTAA------------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493545 129 + 17725628 aaagcggcaactttaagtggaaatctggctgcttcgcctttactggttttggctaacgaattcactttcttccgaccagaccttgttaattaaa-------------------------ctccacaagcagcg-g-gactccggatccgtgctgcG i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e canFam3.chr33 29103778 7 + 31377067 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I a score=248438.000000 s hg38.chr3_KI270779v1_alt 181301 42 + 205312 TC-------GAGTGACTGAGGGTCAGCTGAC-TTGTGATGAAC--------ACA-CCAG s panTro5.chr3 200168114 42 + 202621043 TC-------GAGTGACTGAGGGTCAGCTGAC-TTGTGATGAAC--------AGA-CCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124876 42 + 190779 TC-------GAGTGACTGAGGGTCAGCTGAC-TTGTGATGAAC--------AGA-CCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15516 42 - 189199 TC-------GACTGACTGAGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120927972 42 + 123690457 TC-------GAGTTACTGAGGGTCAGCTGAC-TTGTGATGAAC--------AGA-CCAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202509834 44 + 204787373 TCT-----CGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115279 44 + 192460366 TCT-----CGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601686 44 + 19675229 TCT-----CGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 533907 44 + 16847902 TCT-----CGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 464770 44 - 91754291 TCT-----CGAATTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648752 44 - 1977891 TCT-----CGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503480 44 + 7796314 TCT-----GGAGTTACTGAGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974614 46 - 74750902 -TTAACTCCAAGTTGC----TGTCAACTGACTTTGAGATGAAC--------AGACCCAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493674 50 + 17725628 TTTGGCGTCAGGTGGCCGAGTGTCCGCTGAC-TTGTGACGAAC--------AGACCCAG i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29103785 50 + 31377067 -------TTGAGTTCTTGAGTGTCAACTGAC-TTGTGGCTAACTTGTCCATACA-GTTG i canFam3.chr33 I 7 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e dasNov3.JH569502 3938110 367 + 6579706 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I a score=38684.000000 s hg38.chr3_KI270779v1_alt 181343 5 + 205312 GGAGG s panTro5.chr3 200168156 5 + 202621043 GGAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124918 5 + 190779 GGAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15558 5 - 189199 GGAGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928014 5 + 123690457 GGAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202509878 5 + 204787373 GGAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115323 5 + 192460366 GGAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601730 5 + 19675229 GGAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 533951 5 + 16847902 GGAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 464814 5 - 91754291 GGAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648796 5 - 1977891 GGAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503524 5 + 7796314 GGAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974660 5 - 74750902 AGACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493724 5 + 17725628 AGACG i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29103835 5 + 31377067 GGAAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938477 5 + 6579706 GGAAA i dasNov3.JH569502 I 367 C 0 e otoGar3.GL873829 467538 421 - 608964 I e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I a score=1478731.000000 s hg38.chr3_KI270779v1_alt 181348 226 + 205312 TGGGGCTTC--TTTTTACTTCTCTC-G-TAGGCACGTTATGACTCTATGAATAATACAAATGTTCACAGCTCATgttcatgtg-gtgctttatagcttatctt-g-ttaatagcggccccatttcacaggcggggaaatcgagattcagcggccccatttcacaggcagggaaattgagatttgaagagaccgagtgat---------attatatgccttggaagtagcagggccgggggct s panTro5.chr3 200168161 226 + 202621043 TGGGGCTTC--TTTTTACTTCTCTC-G-TAGACACGTTATGACTCTATGAATAATACAAATGTTCACAGCTCATgtttgtgtg-gtgctttatagcttatctt-g-ttaatagcggccccatttcacaggcggggaaatcgagattcagcggccccatttcacaggcagggaaattgagatttgaagagaccgagtgat---------attatatgccttggaagtagcagggccgggggct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 124923 226 + 190779 TGGGGCTTC--TTTTTACTTCTCTC-G-TAGACACGTTATGACTCTATGAATAATACAAATGTTCACAGCTCATgtttgtgtg-gtgctttatagcttatctt-g-ttaatagcggccccatttcacaggcggggaaatcgagattcagcggccccatttcacaggcagggaaattgagatttgaagagaccgagtgat---------attatatgccttggaagtagcagggccgggggct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15563 226 - 189199 TGGGACTTC--TTTTTACTTCTCTC-G-TAGGCGCGTTATGACTCTATGAATAATACAAATGTTCACAGCTCATGTTCGTGCG-GTGCTTTATAGCTTATCTT-G-TTAATAGCGGCCCcatttcacaggcggggaaatcgagattcagcggccccatttcacaggcagggaaattgagatttgaagagaccgagtgat---------attatatgccttggaagtagcagggccgggggct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928019 227 + 123690457 TGGGACTTC-TTTTTTACTTCTCTC-G-TAGGCACATTATGACTCTATGAATAATACAAATGTTCACAGCTCATGTTCATGTg-gggctttatagcttatctt-g-ttaatagcagccccatttcacaggtggggaaatcgagattcagCGGccccatttcacaggcggggaaatcgagattcgaagagatcgagcgat---------attatatgccttggaagtagcagggctgggggct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202509883 188 + 204787373 CAGGACTT-----CTTCCTTTTCTC-G-TGGGCACATTATGACTCCATGAATAATACAGATGTTCACAGCTCGTGCTCGTGTTCATGctttacagctcatctt-g-ttaacagcggccgcatttcacaggtgaggaaatc------------------------------------gagatttgaagagactgagtgat---------attacatgccttggaagtggcagggccgggggct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115328 191 + 192460366 CAGGACTTC--TCCTTCCTTTTCTC-G-TGGGCACATTATGACTCCATGAATAATACAGATGTTCATAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-g-ttaacagcggccgcatttcacaggtgaggaaatc------------------------------------gagatttgaagagactgagtgat---------attacatgccttggaagtggcagggccgggggct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601735 189 + 19675229 CAGGACTTC--TCCTTCCTTTTCTC-G-TGGGCACATTATGACTCCATGAATAATATAGATGTTCACAGCTCGTGCTCGTGTTCATGctttacagttcatctt-g-ttaacagcggccacatttcacaggtgaggaaatc------------------------------------gagatttgaagagac--agtgat---------attacatgccttggaagtggcagggccgggggct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 533956 191 + 16847902 CAGGACTTC--TCCTTCCTTTTCTC-G-TGGGCACATTATGATGCCATGAATAATACAGATGTTCACAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-g-ttaacagcggccgcatttcacaggtgaggacatc------------------------------------gagatttgaagagactgagtgat---------attacatgccttgcaagtggcagggccgggggct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 464819 191 - 91754291 CAGGACTTC--TTCTTCCTTTTCTT-G-TGGGCACATTATGACTCCATGAATAATACAGATGTTCACAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-g-ttaacagcggccgcatttcacaggtgaggaaatt------------------------------------gagatttgaagagactgagtgat---------attacatgccttggaagtggcagggccgggcgct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648801 191 - 1977891 CAGGACTTC--TCCTTCCTTTTCTC-A-TGGGCACATTATGACGCCATGAATAATACAGATGTTCACAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-g-ttaacagcggccgcatttcacaggtgaggacatc------------------------------------gagatttgaagagactgagtgat---------attacatgccttggaagtggcagggccgggggct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503529 185 + 7796314 TAGGACTTC--TTCTTCCTTTTCTC-G-TGGGCACGTTATGACTCCATGAATAATACAGATGTTCACAGCTCGTGCTCG------TGctttacagctcatctt-g-ttaacagcggccgcatttcacaggtgaggaaatc------------------------------------gagatttgaagagactgagtgat---------attacccgccttggaagtagcagggtggggGGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974665 189 - 74750902 CGGGATTCC-TTTTCTACTTCCCTC-C-TAGGCACACTGTGACTCTATGAATAATAAAAATCTTCATGGCT-ATGTTCGTATG-GTGctttacagcttatctt-g-ttaatagt-gtctcatttcacaggtgaggaaata------------------------------------gagatttgaagagtccgagtgat---------actatacaccttggaagtagcggggctgggGGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493729 188 + 17725628 CGGGATTCC-TTTTCTGCTTCTCTC-G-TAGGCAGGCTGTGACTCGACGGATAATAAACATCTTCATAGCT-GTATTtgtacg-gggctttatagcttacctt-g-ttaatagtggtctcatttcacaggtgaggaaatt------------------------------------gagatttgaagagaccgagcgaT---------ATTTTACACCCTGGAAGCCCCAGGGTGGGGG--T i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 467959 163 - 608964 TGGGATTTC-CTTTGTACTTTTCTCAG-TAGGCACTATTTGACCTTATGACTAATACAAATGTTAATACTTCATGTTGCTATG-GTGCTTTATAGCTTATCTT-G-TTAATAGTGGCCCCATTTCACAGGTGAGAAAACA------------------------------------GA--------------------------------------CCTTGCAAGTAGTAGGGCTCTGGGCT i otoGar3.GL873829 I 421 C 0 s canFam3.chr33 29103840 191 + 31377067 AGGGATTTC-TTTTGTACTTGTCTC-ACTAGGTACATTTTGACTCTATAAATAATAAAAATGTTGATGCCAAATATTTGTATT-GTGCTTTATCGCTCCTTTTAG-TTAATAG-GAccccatttcacaagagaggaaact------------------------------------gagacttggagaggctgagtgac----------ttgcatgccttgtaagtggcaaggcagaggctc i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938482 202 + 6579706 TAGGGCTTTCTTTTGTACCTTTTTCAG-CAGGCACCTTTAGACTCTGTGAATAATAAAATGGTTACTACCTCATATTTGTGTA-GTGTTTTATAGCTTTTCTT-ACTtaatagtacccctatttcacaggtgagaaaact------------------------------------gagactgcaaaag-ctaagggacttgcccaacatcatattctttgtaagtggcagggctgggtctc i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I a score=427972.000000 s hg38.chr3_KI270779v1_alt 181574 59 + 205312 c-gGGGTAAGAGCCATTGCTCGGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG s panTro5.chr3 200168387 59 + 202621043 c-gGGGTAAGAGCCATTGCTCAGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125149 59 + 190779 c-gGGGTAAGAGCCATTGCTCAGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15789 59 - 189199 c-gGGGTAAGAGCCATTGCTCGGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928246 59 + 123690457 c-gGGGTAAGAGCCATTGCTCGGAAGCTGCAA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510071 59 + 204787373 c-ggggcaagagctgctgctcggaagcTGCGA---GC---TGC---TCAGGTCTGGGACTGCCACCGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115519 59 + 192460366 c-ggggcaagagctgctgctcggaagcTGCGA---GC---TGC---TCAGGTCTGGGACTGCCACCGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601924 59 + 19675229 c-ggggcaagagctgctgctcggaagcTGCGA---GC---TGC---TCAGGTCTGGGACTGCCACCGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534147 59 + 16847902 c-gGGGCAAGAGCGGCTGCTTGGAAGCTGCGA---GC---TGC---TCAGGTCTGGGACTGCCACCGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465010 59 - 91754291 c-gGGGCAAGAGCGGCTGCTCGGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCATCGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 648992 59 - 1977891 c-gGGGCAAGAGCAGCTGCTCGGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503714 59 + 7796314 C-AGGGTAAGAGCTGCTGCTCGGAAGCTGCGA---GC---TGC---TCAGCTCTGGGACTGCCACCGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974854 35 - 74750902 T-GAGGTAAGAGCCTCGGCTCTGAGGCTGCGA---GC---TG--------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493917 35 + 17725628 C-AAGGTGAGAGCCTCCACTGTGAGGCTGTGA---GC---TT--------------------------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 468122 63 - 608964 TAAAAGTAAACACCAAAGCTCTGAAGATGTGACTTTT---TGC---TCAGCTCTGGGATTGTCACGGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464226 62 - 98207768 C-AAAGCAAGGCACAAGGCTCAGAGGATGCAC---GCTTGTGC---TCGGCTCTAGGACTGCCATCTGG i mm10.chr16 I 2469 C 0 s canFam3.chr33 29104031 62 + 31377067 -aaaGGTAAGAGTCAAGGCTGGGAAACTGTGA---GCTATTGT---TGAGCAGCAGGACTGTCACCGAG i canFam3.chr33 C 0 I 20 s dasNov3.JH569502 3938684 62 + 6579706 -aaaGATAACCACCAAGGCTCTGGTGACATGA---GC---TGCTGATCAGCTGTGGGACTGTCACCAAG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 26706 596 - 3732694 I e cebCap1.NW_016107444v1 466417 750 - 6778120 I a score=59390.000000 s hg38.chr3_KI270779v1_alt 181633 6 + 205312 TGGAT------------------G s panTro5.chr3 200168446 6 + 202621043 TGGAT------------------G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125208 6 + 190779 TGGAT------------------G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15848 6 - 189199 TGGAT------------------G i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928305 6 + 123690457 TGGAT------------------G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510130 6 + 204787373 TGGGT------------------G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115578 6 + 192460366 TGGGT------------------G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601983 6 + 19675229 TGGGT------------------G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534206 6 + 16847902 TGGGT------------------G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465069 6 - 91754291 TGGGT------------------G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649051 6 - 1977891 TGGGT------------------G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503773 6 + 7796314 TGGGT------------------G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974889 5 - 74750902 -GGAT------------------G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493952 5 + 17725628 -GGAC------------------G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 467167 6 - 6778120 TGGAT------------------G i cebCap1.NW_016107444v1 I 750 C 0 s aotNan1.NW_018507959v1 27302 6 - 3732694 TGGAT------------------G i aotNan1.NW_018507959v1 I 596 C 0 s otoGar3.GL873829 468185 6 - 608964 GGGAT------------------G i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464288 4 - 98207768 --AGT------------------G i mm10.chr16 C 0 C 0 s canFam3.chr33 29104113 24 + 31377067 TGGGCTCTTCTAACCCTTCTTCAG i canFam3.chr33 I 20 C 0 s dasNov3.JH569502 3938746 6 + 6579706 TGGAT------------------G i dasNov3.JH569502 C 0 I 56 a score=222156.000000 s hg38.chr3_KI270779v1_alt 181639 30 + 205312 GAGAGCTGAGG---------CAA-AGATGGAGAAATGGTC s panTro5.chr3 200168452 30 + 202621043 GAGAGCTGAGG---------CAA-AGATGGAGAAATGGTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125214 30 + 190779 GAGAGCTGAGG---------CAA-AGATGGAGAAATGGTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15854 30 - 189199 GAGAGCTGAGG---------CAA-AGATGGAGAAATGGTC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928311 30 + 123690457 GAGAGCTGAGG---------CAA-AGATGGAGAAATGGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510136 30 + 204787373 GAGAGCTGAGG---------CAA-GGATGGGGAAACGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115584 11 + 192460366 GAGGGCTGAGG----------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 601989 30 + 19675229 GAGAGCTGAGG---------CAA-GGATGGGGAAACGGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534212 30 + 16847902 GAGAGCTGAGG---------CAA-GGATGGGGAAACGGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465075 30 - 91754291 GAGAGCTGAGG---------CAA-GGATGGGGAAACGGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649057 30 - 1977891 GAGAGCCGAGG---------CAA-GGATGGGGAAACGGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503779 30 + 7796314 GAGAACTGAGG---------CAA-GGATGGAGAAACGGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974894 30 - 74750902 GAGAGCTGAGG---------CAA-CAGTGGTGAGATAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 493957 30 + 17725628 GAGAGCTGAGG---------CTG-CAATGGTGAGTTGGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 467173 30 - 6778120 GAGAGCTGAGG---------CCA-CAGTGGTGACATAGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 27308 30 - 3732694 CAGAGCTGAAG---------CAG-CAATGGTGAGATAGTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 468191 39 - 608964 GAGAACTGGAATAAGGATAACAA-AGATGGAGAAATGGCG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464292 23 - 98207768 TGGAATGGGGG---------T--------GAGCTATGACA i mm10.chr16 C 0 C 0 s canFam3.chr33 29104137 31 + 31377067 GAGAGCTGAAG---------TAAGGGATGGAGAAAAGATG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3938752 56 + 6579706 I a score=964620.000000 s hg38.chr3_KI270779v1_alt 181669 89 + 205312 ACTGACCTGCCCCAAGTTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCCGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG s panTro5.chr3 200168482 89 + 202621043 ACTGACCTGCCCCAAGTTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCCGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125244 89 + 190779 ACTGACCTGCCCCAAGTTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCCGAGCCAGGCATATTCTC-GGGGTGGACGCTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15884 89 - 189199 ACTGACCTGCCCCAAGTTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCCGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928341 89 + 123690457 ACTGACCTGCCCCAAATTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCTGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510166 89 + 204787373 ACTGACCTGGCCCAGATGCTTGGACTGCCACATGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGACGCGGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115595 73 + 192460366 ----------------TTCTTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGACGCGGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602019 89 + 19675229 ACTGACCTGGCCCAGATGCTTGGACTGCCACATGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGACGTGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534242 89 + 16847902 ACTGACCTGCCCCAGATGCGTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGACGGACGCGGTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465105 89 - 91754291 ACTGACCTGCCCCAGATTCTTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGATGCGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649087 89 - 1977891 ACTGACCTGCCCCAGATGCTTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGACGGACGCGGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503809 89 + 7796314 ACTGACCTGCCCCAGATTCTTGGACTGCCACACGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCACATTCTT-GGGATGGACGCGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 974924 90 - 74750902 ACTGACCCACCCCAAATTCTTGGACTGCCGCCTGCAGAGGGATCCCAGCCTAAGGCCAGGTCAGGCACATTCTCGGGGGTGAATGCTGTG i calJac3.chr17 C 0 I 312 s saiBol1.JH378146 493987 89 + 17725628 ACTGACCTGCCCAGAATTCCTGGACTGCCGCATGCAGAGGGACCTGAGCCTGAGGCCAGGTCAGGCACATTCTC-GGGGTGAACGCGGCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 467203 89 - 6778120 ACTGACCTGCCCGGAATTCTTGGACGGCCGCAGGCAGAGGGATCTGAG-CTGAGGCCAGGTCAGGCACATTCTCAGGGGTGAACGCTGTG i cebCap1.NW_016107444v1 C 0 I 312 s aotNan1.NW_018507959v1 27338 90 - 3732694 ACTGACCCGCCCGAAATTCTTGGACTGCCGCATGCAGAGGGGTCTGAGCCTGAGGCCAGGTCAGGCACATTCTCAGGGGTGAATGCTGTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 468230 89 - 608964 ACTGATCTGCCCCAAGTCCTT-TCCTGCCACATGCAAAGGAGTCTGAGCCTGAGGACAAGTCAGGGATATTTTCAGGGGCAGATGATGTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464315 90 - 98207768 GTTGGCCTGCCCCAGGTTCTTGAGCTGCTGTGTTGATGAGGAGCTGAGCCTGGGGACAAGCCAGGTGCGTGTTTAGGAGCAGAGAATGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29104168 88 + 31377067 ACTGCCCTGCCCTGAGTCCTTAGTCT-CCTTAAGCAGAGTGGTCTGAGCCCTGGGGGAATTCA-GCACATTTTCAGGGGCAAGTGATGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938808 88 + 6579706 AATGACCTGCCCTGTATGCTT-GTCTCCCAGATGCAGAGGTGTTTCAGTCC-AGGACAAGTTTGGTACATTTTCAGGGGCAACTAAATTA i dasNov3.JH569502 I 56 C 0 a score=114011.000000 s hg38.chr3_KI270779v1_alt 181758 8 + 205312 ACACTGGG s panTro5.chr3 200168571 8 + 202621043 ACACTGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125333 8 + 190779 ACACTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15973 8 - 189199 ACACTGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928430 8 + 123690457 ACACTGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510255 8 + 204787373 ACGCTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115668 8 + 192460366 ACGCTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602108 8 + 19675229 ACGCTGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534331 8 + 16847902 ACACTGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465194 8 - 91754291 ACGCTGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649176 8 - 1977891 ACACTGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503898 8 + 7796314 ACACTGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 975326 8 - 74750902 ACACTGGG i calJac3.chr17 I 312 C 0 s saiBol1.JH378146 494076 8 + 17725628 ACACTGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 467604 8 - 6778120 ACACTGGG i cebCap1.NW_016107444v1 I 312 C 0 s aotNan1.NW_018507959v1 27428 8 - 3732694 ACACTGGG i aotNan1.NW_018507959v1 C 0 I 287 s otoGar3.GL873829 468319 8 - 608964 ACACTGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464405 8 - 98207768 GCAACAGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29104256 8 + 31377067 ACACCAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938896 8 + 6579706 ACCTCAGG i dasNov3.JH569502 C 0 C 0 a score=89748.000000 s hg38.chr3_KI270779v1_alt 181766 13 + 205312 GTGTTTTTG-CAAT s panTro5.chr3 200168579 13 + 202621043 GTGTTTTTG-CAAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125341 13 + 190779 GTGTTTTTG-CAAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15981 13 - 189199 GTGTTTTTA-CAAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928438 13 + 123690457 GTGTTTTTG-CAAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510263 14 + 204787373 GTATTTTTGCCAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115676 14 + 192460366 GTATTTTTGCCAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602116 14 + 19675229 GTATTTTTGCCAAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534339 14 + 16847902 GTATTTTTGCCAAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465202 14 - 91754291 GTATTTTTGCCAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649184 14 - 1977891 GTATTTTTGCCAAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503906 14 + 7796314 GTATTTTTGCCAAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 975334 14 - 74750902 ATATTCTTGCCAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 494084 10 + 17725628 Atttcttttt---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 467612 14 - 6778120 ATATTTTTGCCAGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 468327 14 - 608964 ATATTTCCTCCAAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464413 10 - 98207768 ACATTTCTAT---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29104264 14 + 31377067 TTATTTCTGCCAAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938904 14 + 6579706 ATTTTTCTGCCAAT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 27436 287 - 3732694 I a score=299749.000000 s hg38.chr3_KI270779v1_alt 181779 30 + 205312 GTTCCTGGTGTCTCTTTT-CTGGGATGATGT--- s panTro5.chr3 200168592 30 + 202621043 GTTCCTGGTGTCTCTTTT-CTGGGATGATGT--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125354 30 + 190779 GTTCCTGGTGTCTCTTTT-CTGGGATGATGT--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 15994 30 - 189199 GTTCCTGGTGTCTCTTTT-CTGGGATGACGT--- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928451 30 + 123690457 GTTCCTGGTGTCTCTTTT-CTGGGATGATGT--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510277 30 + 204787373 GATCCTGGCGTCTCTTTT-CTGGGATGATGT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115690 30 + 192460366 GTTCCTGGCGTCTCTTTT-CTGGGATGATGT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602130 30 + 19675229 GTTCCTGGCGTCTCTTTT-CTGGGATGATGT--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534353 30 + 16847902 GTTCCTGGCGTCTCTTTT-CCGGGAAGATGT--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465216 30 - 91754291 GTTCCTGGCGCCTCTTTT-CTGGGATGATGT--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649198 30 - 1977891 GTTCCTGGCGTCTCTTTT-CCGGAAAGATGT--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503920 30 + 7796314 GTTCCTGGTGTCTCTTTT-CTGGGATGATGT--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 975348 29 - 74750902 GTTCCTGGTTTATCCTTT--TGGGATGATGT--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 494094 21 + 17725628 --------tttttttttt--tgagatggagt--- i saiBol1.JH378146 C 0 I 1492 s cebCap1.NW_016107444v1 467626 29 - 6778120 GTTCCTGGTTTCTCCTTT--TGGGATGATGT--- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 27723 29 - 3732694 GTTCCTGGTTTCTCCTTT--TGGGATGATGT--- i aotNan1.NW_018507959v1 I 287 C 0 s otoGar3.GL873829 468341 30 - 608964 TTTCCAGGTGTTTCCTTT-CTTTCATGATGT--- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464423 26 - 98207768 -TTCCTGGC-TCTTCTCT-CTCTGATGAT----- i mm10.chr16 C 0 C 0 s canFam3.chr33 29104278 31 + 31377067 TTTCCTAGTATCTCCTTTTCTGTGATGATGT--- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938918 31 + 6579706 TTTCCTCGTGTCTCCCTT-TTTG--TGATATATC i dasNov3.JH569502 C 0 C 0 a score=595923.000000 s hg38.chr3_KI270779v1_alt 181809 52 + 205312 TAGAGTGAG-T-GTGAAGGCTGTTGACACCTTAAGGTGACAAGATCACTGTGAG s panTro5.chr3 200168622 52 + 202621043 CAGAGTGAG-T-GTGAAGGCTGTTGACACCTTAAGGTGACAAGATCACTGTGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125384 52 + 190779 CAGAGTGAG-T-GTGAAGGCTGTTGACACCTTAAGGTGACAAGATCACTGTGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16024 52 - 189199 TAGAGTGAG-T-GTGAAGGCTGTTGACACCTTAAGGTGACAAGATCACTGTGAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928481 52 + 123690457 TAGAGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGATCACTGTGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510307 52 + 204787373 TAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115720 52 + 192460366 TAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602160 52 + 19675229 TAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534383 52 + 16847902 TAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465246 52 - 91754291 TAGGGTGAG-T-ATGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649228 52 - 1977891 TAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 503950 52 + 7796314 TAGAGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 975377 53 - 74750902 CAGAGAGAGCT-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGATCACTGTGAG i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 467655 51 - 6778120 --CAGAGAGCT-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGACCACTGTGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 27752 53 - 3732694 CAGAGAGAGCT-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGATCACTGTGAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 468371 53 - 608964 CAGAGTGACCT-GTCATAGCTGTCGACCCCTTATCGTGACAAGATCATTGCCAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464449 51 - 98207768 CAGTGTGAG-TAGTGA--GTTGTTGCACTCTCGGAGTGGCAAAACCACTGTCCG i mm10.chr16 C 0 C 0 s canFam3.chr33 29104309 51 + 31377067 --CAGTGAGTT-ACAATGGTTGTTGACCCCTTGGGGTGATAAAACTACTGTCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3938949 53 + 6579706 CAGAGTATGAT-GTGATGGCTGTTGACCCCTTGGGATGAAAAGACTGCTGTTAG i dasNov3.JH569502 C 0 I 399 e saiBol1.JH378146 494115 1492 + 17725628 I a score=2112435.000000 s hg38.chr3_KI270779v1_alt 181861 226 + 205312 AAGACACACGTGTGTCATTGAGTAAAACGGATAGTTTTTAAGACATTCTCTC--AGAGGAAGAGTCTCCATCCAGGGACGAGGAGGGCACTGGCGTTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTTGAAGGCTCTGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACCACGTCAGGTGGGAGACG s panTro5.chr3 200168674 226 + 202621043 AAGACACACGTGTGTCATTGAGTAAAACGGATAGTTTTCAAGACATTCTCTC--AGAGGATGAGGCTCCATCCAGGGACGAGGAGGGCACTGGCGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGGCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACCACGTCAGGTGGGAGACG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125436 226 + 190779 AAGACACACGTGTGTCATTGAGTAAAACGGATAGTTTTTAAGACATTCTCTC--AGAGGATGAGGCTCCATCCAGGGACGAGGAGGGCACTGGCGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGGCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACCACGTCAGGTGGGAGACG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16076 226 - 189199 AAGACACACGTGTGTCATTGAGTAAAACAGATAGTTTTTAAGACATTCTCTC--AGAGGAGAAGGCTCCATCCAGGGACGAGGAGGACACTGGCGTTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGGCTCTGTCAA-GCCTCT--GCCATCACATCAGCCAGAGATC--TCCCACCAAG-GTAGTT-ATTTTCTCTCCTTGAACCACGTCAGGTGGGAGACG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928533 226 + 123690457 AAGACACATGTGTGTCATTGAGTAAAATGGATAGTTTTTAAGACATTCTGTC--AGAGGAGGAGGCTCCATCCAGGGACTAGGAGGGCACTGGCGTTGGCACTGAGGTAGACACGTTCCCCACATCTGAGTCCTCGAAGCCTCTGTCAA-GCCTCT--GCCATCGTGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACCATGTCAGGTGGGAGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202510359 226 + 204787373 AAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTAATGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCAAAGCCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115772 226 + 192460366 AAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTAATGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602212 226 + 19675229 AAGACACACATGTGTCATCGAGTGAAATGGAGAGTTTTAATGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTTGAAGCCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534435 225 + 16847902 AAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTTAAGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGA-GGCACTGGAGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCCCCTTGAACTGCCTCGGGTGGGAGACG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465298 226 - 91754291 AAGACACACGTGCGTCACCGAGTGAAATGGAGAGTTTTTAAGACATTCTCTC--AGAGGAGGAGGCTCCACCCAGGGACAAGGAGGGCACTGGAGCTGGTACTGAGGCAGAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649280 225 - 1977891 AAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTTAAGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGA-GGCACTGGAGCTGGCACTGAGGTACAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAA-GCCTCT--GCCATCACGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CTTTTCTCCCCTTGAACTGCCTTGGGTGGGAGACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504002 226 + 7796314 AAGACACACGTGTGTCATCGAGTAAAATGGAGAGTTTTTAAGACATTCTCTC--AGAGGAGGCAGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTAGAGACGGTCCCCACATCTGAGTCCTCGAAGCCTCCATCGA-GCCTCT--GCCATCGCGTCAGCCAGAGATC--TCCCATCAAG-GTAGTT-CCTTTCTCTCCTTGAACTGCCGCAGGTGGGAGACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 975430 222 - 74750902 AAGACACA-GTGTGACACAGAGTGAAATGGATAGTTTTTAAGATGTTC-CTC--AGAGGAGGAGGCTCCATCCAGGGATGAGGAGAGCGCTGGAGCTGGCACTGAGGTAGAGACAGTCCTCGAACCTGAGTCCTCGAGCTCTCCATCGA-GACTCG--GCC-TCACGTCAGCCAGAGACC--TCCCATCATG-GTTGTT-ATTTTCTCTCC-CGAACCGAGTCAGGCAGGAGATG i calJac3.chr17 C 0 I 366 s cebCap1.NW_016107444v1 467706 220 - 6778120 AAAACACA-GTGTGACATCGAGTAAAATGGAGAGTTTTTAAGACGTTCTCTC--AGAGAAGGAGGCTCCATCCAGGGACGAGGAGGGCGCGGGAGCTGGCACTGAGGTAGAGACCTTCCTCACACCTGAGTCCTCAAACTGTCCATCGA-GTCCCT--GCC-TCACGTCCGCCAGAGACC--TCC---CATG-GTCGTT-ATTTTCTCTCC-TGAGCCGTGTCAGGTGGGAGATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 27805 219 - 3732694 AAGACACA-GTGTGACATCAAGTAAAATGGATAGTTTTTAAGATGTTC-CTT--AGAGGAGGAGGCTCCGTCCAGGGACGAGGAGGGCTCTGGAGCTGGCACTGAGGTAGAGACATTCCTCACACCTGAGGCCTTGAACTCTCCATCGA-GCCTCT--GCC-TCACATCAGCCAGAGACC--TCC---CATC-CTGCTT-ATTTTCTCTCC-TGAACCGTGTCAGGCGGGAGATG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 468424 221 - 608964 GAGACATA--TGTGATATTGCATCAAATGGATAGTCTTTCAGAAGCCCTTAC--AGAGGGGGAGGCCTTACCCAGGAACGATGAGGGTACTAGAGTCAGCACGGAGGTGGGGAGACTCCCTGTACCTCAGTCTCTGAAACCTCCACGGA---CTAA--GTCACCACTTCAATCAGAGAGC--TCCTGACGAG-GTAGTTATTTTTCTCTCCTTGAACTGTGTTGG--CGGAGATG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464500 170 - 98207768 ATGGTCCACGTGGGACA--GTCTAAAACAGAAAAACTTCCAA--GTTCTAAG--AGAGGA-GAAGCGTCACACAGGGAT------AGCAACGCCTTTGGTTCTGAGGTGGGGCTGAGCCTTGTAGCTGTGTCCTGGAGACCTCAGTACA-CGCTCT--GCC--TACTCTGGC-----------CTCAACAAA-GCCATG-G---------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29104360 216 + 31377067 AAGACCCAAGTGTGATATAGCCTAAGATGGATAGTTCAAAAGAAGCTCCCTCAGAGAGGAGGAGCCTGCATCAGGAGCCAGTGAGAGCACCAGGGCCGGTA-TGAGGTAGGG-CATTCCTCAC-TTGGAGTCCTGGAACCCTCCA-CGG-GTTTCTTGGCTACCACTGCAGGGAGAGAGC--TCTCAGCAAA-GCAGCT-AT----------TAAACTGCGTCTGGTGGGAGGTA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3939401 208 + 6579706 AAGACACGTGTGTGCTATCACCTAAAATGGATAGTGTTTAAG---TTCTCTC--AGAGGAGGAGCCTTCACCCAGGGACAGCAAGGGCACCAGAGCTGGCACCAAGGTGGGGGTACTGCTCACAGCTG--------GAACCTCCGTGGGTTTCCCT--GCCACCACTTCAGTCAGACAGCTGTCTCAGCAAATGCAGCT-GTTT-----------GCATCGGCAGGTGGGAGATG i dasNov3.JH569502 I 399 C 0 e saiBol1.JH378146 494115 1492 + 17725628 I a score=4059693.000000 s hg38.chr3_KI270779v1_alt 182087 431 + 205312 GCCCACAGC---TGCCTCACGTCTGTTAGGGCTCCA--GGATGTGAAGGCCGA--GTGGCAGTAGGCATCGTTTTCCCCAGATG-------GCCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGAGTGGCAGCAGTATGAGTGACGCTGGCAGAAG-ACA-GATTCCAA--GAAGGGTG-AAGCCACTCCCTGAAGACACA-CAAAGC----------------------------------CTGCGGCTT---TC----------TAAGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCGTAAGCCGTATCG-CCACAGT--GTTTCACTTTCCTGGAGGGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA s panTro5.chr3 200168900 431 + 202621043 GCCCACAGC---TGCCTCACGTCTGTTAGGGCTCCA--GGATGTGAAGGCCGA--CTGGCAGTAGGCATCGTTTTCCCCAGATG-------GCCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGCCTCGGGAGAAGGAGTGGCAGCAGTATGAGTGACGATGGCAGAAG-ACA-GATTCCAA--GAAGGGTG-AAGCCACTCCCTGAAGACACA-CAAAGC----------------------------------CTGCGGCTT---TC----------TAAGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCATAAGCCGTATCA-CCACAGT--GTTTCACTTTCCTGGAGGGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 125662 431 + 190779 GCCCACAGC---TGCCTCACGTCTGTTAGGGCTCCA--GGATGTGAAGGCCGA--CTGGCAGTAGGCATCGTTTTCCCCAGATG-------GCCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGCCTCGGGAGAAGGAGTGGCAGCAGTATGAGTGACGATGGCAGAAG-ACA-GATTCCAA--GAAGGGTG-AAGCCACTCCCTGAAGACACA-CAAAGC----------------------------------CTGCGGCTT---TC----------TAAGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCATAAGCCGTATCA-CCACAGT--GTTTCACTTTCCTGGAGGGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16302 431 - 189199 GCCCACAGC---TGCCTCACGTCTGTTAGGGCTCCA--GAATGTGAAGGCCGA--GTGGCAGTAGGCATCGTTTTCCCCAGATG-------GCCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGAAAGGTGTGCTGTTGGCTCGGGAGAAGGAGTGGCAGCAGTATGAGTGACGATGGCAGAAG-ACA-GATTCCAA--GAAGGGTG-AAGCCACTCCCTGAAGACACA-CAAAGC----------------------------------CTGCGGCTT---TC----------TAAGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCGTAAGCCATATCG-TCACAGT--GTTTCACTTTCCTGGAGGGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120928759 420 + 123690457 GCCCGCAG--------------CTGTTAGGGCTCCA-GGGATGTGAAGGCTGA--GTGGCAGTAGGCATCGTTTTCCCCAGGTG-------GCCCCTCTGCTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCTGGAGAAGGAGTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GGTTCCAA--GAAGGGTG-AAGCCAATCCCTGAAGAAACA-CAAAGC----------------------------------CTGCGGCTT---TC----------T-AGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCGTAAGCCATATGG-CCACAGT--GTTTCTCTTTCCTGGAGCGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTGAGCCCAAGGGAAGTGCCCAACGGTGA i nomLeu3.chr11 C 0 I 258 s rheMac8.chr2 202510585 434 + 204787373 CCCCGAAGC---GCCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTGA--GTGGCAGTC-GCATGGTTTTCCCCAGGTTTTCCCCAGTCCCTCTGGTGATTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GATTCCAA--GACGGGTG-AAGCCACTCCCTGAAGAAACAGCAAAGC----------------------------------CTGCGGCGT---TC----------TAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCATCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCACATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 115998 434 + 192460366 CCCCGCAGC---GCCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTGA--GTGGCAGTC-GCATGGTTTTCCCCAGGTTCTCCCCAGTCCCTCTGGTGATTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GATTCCAA--GACGGGTG-AAGCCACTCCCTGAAGAAACAGCAAAGC----------------------------------CTGCGGCGT---TC----------TAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCATCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCACATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602438 434 + 19675229 CCCCGCAGC---GGCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTGA--GTGGCAGTA-GCATGGTTTTCCCCAGGCTTTCCCCAGTCCCTCTGGTGATTCCACAGGTGTGCCGAGGTGACAGATGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GATTCCAA--GACGGGTG-AAGCCACTCCCTGAAGAACCAGCAAAGC----------------------------------CTGCGGCGT---TC----------TAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCCTCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCACATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 534660 467 + 16847902 CCCCGCAG----GGCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTGA--GTGGCAGTA-GCATGGTTTTCCCCAGGTTTTCCCCAGTCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GACTCCAA--GACGGGTG-AAGCCACTCCCTGAAGAAACAGCAAAGCCTGCGGCGTTCTAAGTGCTGCGGCGTTCTAAGTGCTGCGGCGT---TC----------TAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCATCTGGTCTGTTTGCCTTGGGTGTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCATATCGCCCACAGG--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGCAAGCCGAAGGGAAGTGCCCAACGGTAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465524 427 - 91754291 CCCCCCAGC---GGCCTCGCGTCTTTTAGGGTTCCA-GGAACGTGAAGGCTGA--GTGGCAGTA-GCATGGTTTTCCCCAGGTG-------GTCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGGCTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GATTCCAA--GACCGGTG-AAGCCACTCCCTGAAGAAACAACAAAGC----------------------------------CTGCGGCGT---TC----------TAAGTGCTGTGGCCTGAGGCTTGTTCCTAGCATCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCATATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCTGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649505 433 - 1977891 CCCCGCAG----GGCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTGA--GTGGCAGTA-GCATGGTTTTCCCCAGGTGGTCCCCAGTCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTGGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACA-GACTCCCA--GACGGATG-AAGCTGCTCCCTGAAGAAACAGCAAAGC----------------------------------CTGCGGTGT---TC----------TAAGTGCTGCGGCTTGAGGCTTGCTCCTAGCATCTGGTCTGTTTGCCTTGGGTGTT--TCCTGGAACCGGAGGTGAGGAACCCGTAAGCCATATCGCCCACAGG--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGCAAGCCCAAGGGAAGTGCCCAACGGTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504228 428 + 7796314 CCCCGCAGC---GGCCTCCCGTCGTTTAGGGCTCCA-GGAATGTGAAGGCTGA--GTGGCAGTAGGCATGGTTTTCCCCAGGTG-------GTCCCTCTGGTGGCTCCACGGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGTGTGGCAGCAGCATGAGTGACAATGGCGGAAG-GCA-GATTCCAA--GACGGGTG-AAGCCACTCCCTGAAGAAACAACAAAGC----------------------------------CTGCGGCTT---TC----------TAAGTGCTGTGGGTTGAGGCTTATTCCCAGCATCTGGTCTGTTGGCCTCGGGTTTT--TCCTGGAACCGGAGGTAAGGAACCCATAAGCCATATCACCCACAGT--GTTCCACTTTCCT-----GGCATTACTTCCTGCCTGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 976018 419 - 74750902 GTCCCCAGC---TG-CTCACGTCTCTTAGGGCTCCA-GGGATGTCAAGGATGA--CTGACAGCAGGCATGGTTTTCCCCAGGTG-------GCCC-TCTGGTGACTCCGCAGGTGTGACAAGGTGACAGGTGTGCTGCTGGCTTGGGAGAAGGAGTGGTGGCAGCATGAGTGGTGATGGCGG--G-ACA-CATTCCAA--GATGGGTG-ACGGCACTCCCTGAGGAAACCACGAAGC----------------------------------CTGCGGCTT---TG----------CGTGCG-TGTGGGCTGAGGTCTGTTCCTGGCATCTGGTCTGTTTATTTTGAGTTTT--TCCTGGAACGGGGGGTGAGGGACCCATCGACTGTATTGCCCACAGT--GTTCCACTTTCCT-----GGCATTACTCCCTGGCTGCTGGGGCCCCTTGCCTGGCCGCCTC-----GGGCAGTGTAAGCCCAAGGGAGGCGCCCAACCATAA i calJac3.chr17 I 366 C 0 s cebCap1.NW_016107444v1 467926 412 - 6778120 --TCCCAGC---TGTCTCAGGTCTCTTACAGCTCCA-GGGATGTCAAG---GA--CTGACAGC-GGCATCG-TTTCCCCAGGTG-------GCCC--CTGGTGACTCCACAGGTGTGACAAGGCGACAGGCGTGCGGCTGGCTCGGGAGAAGGAGCGGTGGCAGCATGAGTGGTGATGGCGGAAG-ACA-CATTCCGA--GTCGGGTA-ACGGCACTCCCTGGGGAAACAATAAAGC----------------------------------CTGCGGCTT---TG----------CATGCGCTGTGGGCTGAGGCTCGTTCCTGGCATCTGGTCTGTTTG-TTTGAGTCTT--TCCTGGAAC-GGGGGTGAGGAACCCGTAAACGGTATCACCCACAGC--GCTGCACTTTCCT-----GGCATAACTTCCCGGCTGGTGGGG-CCCTTGCCTGGCTGCCTC-----GGGCAGCGTGAGCCCAAGGGAGGTGCCCAGCTGTAA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28024 409 - 3732694 -TCCCCAGG---TGCCTCGCGTCTCTTAGGGCTCCA-GGGATGTCAAGGATGA--CTGACAGCAGGCATCGTTTTCCCCAGGTG-------GCCC-TCTGGTGACTCCGCAGGTGCGACAAGGCGACAGGTGTGCTGCTGGCTCGGGAGAAGGAGTGGTGGCAGCGTGAGTGGTGATGGCGGAAG-ACA-CATTCCGG--GATGGGTA-ACGGCACTGCCGGAAGAAACAGCAAAGC------------------------------------------T---TC----------CGTGCGCTGTGGGCTGAGGCTTGTTCCTGGCATCTGGTCTGTTTGTTTTCCGTTTT--TCCTGGAACGGGAGGTGAGGAACCCATAGACTGTATCG--CACAGC--GTTCC---TTCCT-----GGCATTACTTCCTGGCTGGTGGGGCCCCTGGCCTGGCCGCCTC-----GGGCAGTGTAAGCCCAAGGGAGGCACCCAGCTGTAA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 468645 416 - 608964 TCCGCTAGT---TGTCTTATGCCTTTTGGGGCTCTA-GGGATAGTGAGGTTGATGGTGATAACAGGCCTGG-TTTCCCTGGGTG-------ACCC-TCTGGTGACTCTGCAGGTATGAGAAGGCGGTGGGTGTGGTGTTGACTCTAGAGAAGGCGTGGTGGTAGCCTGAATGATGCTGGTAGAAG-ATATCATTTCAAAGGAGGGCTG-AAGTCACGCCCTGAAGAAATAGCAAAGC----------------------------------CTGT-GCCT---TG----------TGTGTGTTGTGG-TTGAAGCTTATTTTTACCATCTGGTTTGTTTGTCTTGAGTTTT--TCCTGGAATTGGAGGTGAGGAACCCATACACCACATCACCCACAGT--GTTTCACTTTTCT-----CCTATTATTTCCTGATTGGTGAGGCTCTTTGCCAGGCTGCCT------GGG--------GCCCGGGCAGAGCACTCAGCTATAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65464670 423 - 98207768 CCCCCCAGC---TGTGTGGTGCCTCTCAGGGTTCCA-GGGATGGTGAGGTTGAAAGTGAAAATGGTCATCACTCTTCTCAGT---------GGCCCTCTGGTGACTCTACAGTCATGAGAAGGTGATGGGTGTGCTGTTGATTC---AGGGGGAGTGGTGGCAGCAGGGGTGTAGAGGACAGAAGAATA-CATTCCA---GTGGGGTG-GAGTGTCACACCACAGAGAGA-AAATGT----------------------------------GCTTCACCT---GG----------CATGCTCTGTGGGCTGAGGCTGCGTCTTAGCACCTTCTCTGTTTGTTTTGGGTTTTTCTCCTGGATCTAGAGGTGACAACCCCATAAACCAAATTTCCCACAATCCCCCTCACTTCCTC-----AATGCTCTTTCTTGGCTGGCGATCTCTT-TGCAGGGTTGCCTGGGAGAGAGTAG----AGTCCAAGCAGAGAACCCAACGGTA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29104576 424 + 31377067 ---CCTAGCCCTCGTCTGAGTCCTCTCAGGACTGCAGGGAAGGCAGAGGTTGATGGTGTTGATAGAAACTGTTTCT-----GTG-------GCCC-TCTGGTTACTCCACAGGTATGAGGAGGTGGTGGGCGTGTTGTTGACTCAGCTGAAGGAGTGGTGGCCGCAGTGGTGATGCTGATGGAAG-ATAACATTCCCA--CACCATGGTAAATCACTCCTTAAAGAGAAA-CAAAGC----------------------------------CTATGTCTTACATG----------TGTGCATTGTGGGCAGAAGTTTATTCTTAGTGCCTGCTCTGTTTGTCTTAAGTTAT--TCCTGGAACTGGAGGTGAGGAACCCATGAGCCATATCACCCACAAA--GTTTCACTTTTCT-----GCTGTTATTTCCTGATTGGTGGGACTC--TGCCAGGCTGTGCCTG---GGGCCGTGTAGAGCTAAG-GAAGCACTCAACTGTGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3939609 427 + 6579706 TCCGGCAGT---TGTGTTATTGCTCTCAGGGCTGCG-AGGATGGCAGGATGGATGGTGTAATTAGGCAT----------------------GTTC-TCTGGTGACT-GGCAAGTATGAGGAGCTGGTGGGTGTGCTGCTGATTCGGGTGAAGGAGTGGTGGCAGATGTGGCGATGATGGTGGCAG-ATAACATTCCCACAGAGTGGTG-ATGCCACTCCCTGAAGAGAAAACAAAGC----------------------------------CCGTGCCTT---GCGTGCGTGGGTTGTGGGTTGTGGGTTGAGACCTATTCATAGCACCTGGTCTGTTTGTCTTGAGTTAT--TCCTGGAATTGGAGGTGAGGAAGGCATGAGCCAAAACACCCACAGG--GTTTTACTTTTCT-----GCTTTTACTTCCTGATTGGTGGGGCAGTTGGCCAGGCTGTACCCAGGAGAGTGCTAAAAGTCTAGAGAAAAAACCCTGAGGCAC i dasNov3.JH569502 C 0 C 0 e saiBol1.JH378146 494115 1492 + 17725628 I a score=99924.000000 s hg38.chr3_KI270779v1_alt 182518 10 + 205312 GGATGGCCTT s panTro5.chr3 200169331 10 + 202621043 GGATGGCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126093 10 + 190779 GGATGGCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16733 10 - 189199 GGATGGCCTT i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202511019 10 + 204787373 GGATGGCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116432 10 + 192460366 GGATGGCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602872 10 + 19675229 GGATGGCCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535127 10 + 16847902 GGATGGCCTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465951 10 - 91754291 GGATGACCTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649938 10 - 1977891 GGATGGCCTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504656 10 + 7796314 GGATGGCCTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 976437 10 - 74750902 AGATGGCCTT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 468338 10 - 6778120 GGACGGCCTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28433 10 - 3732694 GGACGGGCTT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 469061 10 - 608964 GAATAGCCTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29105000 10 + 31377067 GGATAGCCTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3940036 10 + 6579706 AAACCTCCTT i dasNov3.JH569502 C 0 I 540 e mm10.chr16 65465093 0 - 98207768 C e saiBol1.JH378146 494115 1492 + 17725628 I e nomLeu3.chr11 120929179 258 + 123690457 I a score=147445.000000 s hg38.chr3_KI270779v1_alt 182528 21 + 205312 GAGGAGAACATTCAGCCCCAC s panTro5.chr3 200169341 21 + 202621043 GAGGAGAACATTCACTCCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126103 21 + 190779 GAGGAGAACATTCACTCCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16743 21 - 189199 GAGGAGAACATTCACCCCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202511029 21 + 204787373 GAGGAGAACATTCGCCCACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116442 21 + 192460366 GAGGAGAACATTCGCCCACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602882 21 + 19675229 GAGGAGAACATTCGCCCACAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535137 21 + 16847902 GAGGAGAACATTCACCCGCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465961 21 - 91754291 GAGGAGAACATTCGCCCGCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649948 21 - 1977891 GAGGAGAACATTCGCCTGCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504666 21 + 7796314 GAGGAGAACGTTTGCCCGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 976447 20 - 74750902 GAGGAGAACACTC-CCCCTAC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 468348 21 - 6778120 GAGGAGAGCGCTCACCCCCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28443 21 - 3732694 GAGGGGAGCACTCACCCCCAC i aotNan1.NW_018507959v1 C 0 I 89 s otoGar3.GL873829 469071 21 - 608964 GAGGAGAAAATCCACTTACCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65465093 10 - 98207768 -------GCATTTTTTT---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29105010 21 + 31377067 GAAGAGAAAATTGACTCATGA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3940046 540 + 6579706 I e saiBol1.JH378146 494115 1492 + 17725628 I e nomLeu3.chr11 120929179 258 + 123690457 I a score=87148.000000 s hg38.chr3_KI270779v1_alt 182549 12 + 205312 ACAGGCAGCAGG s panTro5.chr3 200169362 12 + 202621043 ACAGGCAGCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126124 12 + 190779 ACAGGCAGCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16764 12 - 189199 ATGGGCAGCAGG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202511050 12 + 204787373 ACAGGCGGCAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116463 12 + 192460366 ACAGGCAGCAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602903 12 + 19675229 ACAGGCGGCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535158 12 + 16847902 ACAGGCGGCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465982 12 - 91754291 ACAGGCGGCAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649969 12 - 1977891 ACAGGCGGCAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504687 12 + 7796314 GCAGGCGGCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 976467 12 - 74750902 CCGGGCCGTGGC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 468369 12 - 6778120 CCGGGCTGTGGG i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 469092 12 - 608964 ATGGGCAGCAGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65465103 9 - 98207768 ---AGCAGTAAA i mm10.chr16 C 0 I 1 s canFam3.chr33 29105031 12 + 31377067 ATGGGCAGCAGG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3940046 540 + 6579706 I e aotNan1.NW_018507959v1 28464 89 - 3732694 I e saiBol1.JH378146 494115 1492 + 17725628 I e nomLeu3.chr11 120929179 258 + 123690457 I a score=14665.000000 s hg38.chr3_KI270779v1_alt 182561 5 + 205312 CGGCC- s panTro5.chr3 200169374 5 + 202621043 CAGCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126136 5 + 190779 CAGCC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16776 5 - 189199 CAGCC- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929437 5 + 123690457 CGGCC- i nomLeu3.chr11 I 258 C 0 s rheMac8.chr2 202511062 5 + 204787373 CGGCC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116475 5 + 192460366 CGGCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602915 5 + 19675229 CGGCC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535170 5 + 16847902 CGGCC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465994 5 - 91754291 CAGCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649981 5 - 1977891 CGGCC- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504699 5 + 7796314 CGGCC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 976479 4 - 74750902 CATC-- i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 468381 5 - 6778120 CGTCC- i cebCap1.NW_016107444v1 C 0 I 71 s otoGar3.GL873829 469104 4 - 608964 -TGCT- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65465113 4 - 98207768 GAGT-- i mm10.chr16 I 1 C 0 s canFam3.chr33 29105043 5 + 31377067 -TGCCC i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3940046 540 + 6579706 I e aotNan1.NW_018507959v1 28464 89 - 3732694 I e saiBol1.JH378146 494115 1492 + 17725628 I a score=127833.000000 s hg38.chr3_KI270779v1_alt 182566 20 + 205312 CGGAA---------------GGCGCGCAGACGCTG s panTro5.chr3 200169379 20 + 202621043 CGGAA---------------GACGTGCAGACACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126141 20 + 190779 CGGAA---------------GACGTGCAGACGCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16781 20 - 189199 CGGAA---------------GGCGCGCAGACCCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929442 20 + 123690457 CGGAA---------------GGCGCGCAGATGCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511067 20 + 204787373 GGGAA---------------GGCGTGCAGACGCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116480 20 + 192460366 GGGAA---------------GGTGTGCAGACGCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602920 20 + 19675229 GGGAA---------------GGTGTGCAGACGCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535175 20 + 16847902 GGGAA---------------GGCGTGCAGACGCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 465999 20 - 91754291 TGGAA---------------GGCCTGCAGACGCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 649986 20 - 1977891 GGGGA---------------GGCGTGCAGACGCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504704 20 + 7796314 TGGAA---------------GGCGTGCAGACGCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 976483 19 - 74750902 -CGGA---------------GGTGTGCAGACACTG i calJac3.chr17 C 0 I 27 s otoGar3.GL873829 469109 20 - 608964 TGAAA---------------GTTGTGAAAAAGTTG i otoGar3.GL873829 I 1 I 2 s mm10.chr16 65465117 20 - 98207768 TGGAA---------------AGTGTATAGAAGTTG i mm10.chr16 C 0 I 7 s canFam3.chr33 29105048 35 + 31377067 TGAAAGCTAATAAAGAGATCGGCAGAGAGAGGCAG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3940046 540 + 6579706 I e aotNan1.NW_018507959v1 28464 89 - 3732694 I e cebCap1.NW_016107444v1 468386 71 - 6778120 I e saiBol1.JH378146 494115 1492 + 17725628 I a score=223258.000000 s hg38.chr3_KI270779v1_alt 182586 43 + 205312 AACCGCTGGCCCCACCGCCTTTGGCAGGGAGCTAATGCTATTT s panTro5.chr3 200169399 43 + 202621043 AACCGCTGGCCCCACCGCCTTTGGCAGGGAGCTAATGCTATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126161 43 + 190779 AACCGCTGGCCCCACCGCCTTTGGCAGGGAGCTAATGCTATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16801 43 - 189199 AACCGCTGGCCCCACCGCCTTTGGCAGGGAGCTAATGCTATTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929462 42 + 123690457 AACC-CCGGCCCCACCGCCTTTGACGGGGAGCTAATGCTATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511087 43 + 204787373 AACCGCCGGCCCCACCGCCCTTGGTGGGGAGCTAATGCTATCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116500 43 + 192460366 AACCGCCGGCCCCACCGCCCTTGGTGGGGAGCTAATGCTATCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602940 43 + 19675229 AACCGCCGGCCCCACCGCCCTTGGTGGGGAGCTAATGCTATCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535195 43 + 16847902 AACCGCCGGCCCCACTGCCCTTGGTGGGGAGCTAATGCTATCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466019 43 - 91754291 AACCGCCGGCCCCACCGCCCTTGGTGGGGAGCTAATGCCATCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650006 42 - 1977891 AACCGCCGGCCCCACCGCCCTTGGT-GGGAGCTAATGCTATCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504724 43 + 7796314 AACCGCCGGCCCCGCCGCCCTTGGTGGAGAGCTGATGCTATCT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 469131 31 - 608964 GGAGGGAGGCTTCCTTGCAT------GGGAGCCAGTG------ i otoGar3.GL873829 I 2 C 0 s mm10.chr16 65465144 26 - 98207768 GAGGGCCAGCCTT-CCACCCTCTGTGT---------------- i mm10.chr16 I 7 C 0 s canFam3.chr33 29105083 43 + 31377067 GACCCCCTGCCTGGCCTCCCTGTTTGGGAGCCAAGAGCCATCT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3940046 540 + 6579706 I e aotNan1.NW_018507959v1 28464 89 - 3732694 I e cebCap1.NW_016107444v1 468386 71 - 6778120 I e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I a score=66622.000000 s hg38.chr3_KI270779v1_alt 182629 11 + 205312 ----GTGTATCAG-CC s panTro5.chr3 200169442 11 + 202621043 ----GTGTATCAG-CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126204 11 + 190779 ----GTGTATCAG-CC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16844 11 - 189199 ----GTGTATCAG-CC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929504 12 + 123690457 ----GTGTATCAGCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511130 12 + 204787373 ----GTGTATGACCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116543 12 + 192460366 ----GTGTATCAGCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602983 12 + 19675229 ----GTGTATCAGCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535238 12 + 16847902 ----GTGTATCAGCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466062 12 - 91754291 ----GTGTATCAGCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650048 12 - 1977891 ----GTGTATCAGCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504767 12 + 7796314 ----GTGTATCAGCCC i colAng1.NW_012118932v1 C 0 C 0 s cebCap1.NW_016107444v1 468457 12 - 6778120 ----GTGTGTCAGCCT i cebCap1.NW_016107444v1 I 71 C 0 s aotNan1.NW_018507959v1 28553 12 - 3732694 ----GTGTATCAGCCT i aotNan1.NW_018507959v1 I 89 C 0 s otoGar3.GL873829 469162 3 - 608964 -------------GCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65465170 11 - 98207768 ----GCATATCAG-CC i mm10.chr16 C 0 C 0 s canFam3.chr33 29105126 16 + 31377067 GTACCTCTGTCAGCCG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3940046 540 + 6579706 I e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I a score=267845.000000 s hg38.chr3_KI270779v1_alt 182640 31 + 205312 CAGAAT-----CAACTG-TGACCAGGG-TTGTGTCCAC s panTro5.chr3 200169453 31 + 202621043 CAGAAT-----CAACTG-TGACCAGGG-TTGTGTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126215 31 + 190779 CAGAAT-----CAACTG-TGACCAGGG-TTGTGTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16855 31 - 189199 CAGAAT-----CAACTG-TGACCAGGG-TTGTGTCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929516 31 + 123690457 CAGAAT-----CGACTG-TGACCAGCG-TTGTGTCCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511142 31 + 204787373 CAGAAT-----CAACTG-TGACCAGCG-TTGTGACCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116555 31 + 192460366 CAGAAT-----CAACTG-TGACCAGCG-TTGTGACCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 602995 31 + 19675229 CAGAAT-----CAACTG-TGACCAGCG-TTGTGACCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535250 31 + 16847902 CAGAAT-----CAACTG-TGACCAGTG-TTGTGACCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466074 31 - 91754291 CAGAAT-----CAACTG-TGACCAGCG-TTGTGACCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650060 31 - 1977891 CAGAAT-----CAACTG-TGACCAGCG-TTGTGACCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 504779 31 + 7796314 CAGAAT-----CAACTG-TGACCAGCG-TTGTGACCAC i colAng1.NW_012118932v1 C 0 M 9616 s cebCap1.NW_016107444v1 468469 31 - 6778120 CAGAAC-----CCACTG-TGACCTGTG-CTGTACCCAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28565 31 - 3732694 CAGAAT-----CAACTG-TGACCCGTG-TTGTGCCCAC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 469165 33 - 608964 CAGAAT-----CAGATGCTACCCAGTGTTTGTGTCCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65465181 29 - 98207768 TTGAAT-----AGACTG---ACGGGTA-TTGCATGCAC i mm10.chr16 C 0 I 5 s canFam3.chr33 29105142 36 + 31377067 CAGCATAGGCACAGCTC-TTATCCTCA-TGGTGGTAAC i canFam3.chr33 C 0 I 7 s dasNov3.JH569502 3940586 29 + 6579706 CAGAAA-------ACCG-TGACCAGGG-TTGTGTTAGC i dasNov3.JH569502 I 540 C 0 e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I a score=18940.000000 s hg38.chr3_KI270779v1_alt 182671 15 + 205312 TGGGTA-----CTTCC------------CTAG s panTro5.chr3 200169484 15 + 202621043 TGGGTA-----CTTCC------------CTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126246 15 + 190779 TGGGTA-----CTTCC------------CTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 16886 15 - 189199 TGGGTA-----TTTCC------------CTAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929547 16 + 123690457 TGGGTA----TTTTCC------------CTAG i nomLeu3.chr11 C 0 C 0 s cebCap1.NW_016107444v1 468500 16 - 6778120 TGGGTA----TTCTTC------------CTAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28596 16 - 3732694 TGGGTA----TTTTTC------------CTAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 469198 27 - 608964 AGGGCAATTTTTTTCCTGT-----TGTTCTAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65465215 25 - 98207768 TGTGTC-----TTTCTTTT--ATCTGTCCTAG i mm10.chr16 I 5 C 0 s canFam3.chr33 29105185 15 + 31377067 TGGGTA-----CTCCC------------TCAG i canFam3.chr33 I 7 I 1884 s dasNov3.JH569502 3940615 27 + 6579706 TGGGTA-----TTCTCTCTCCATAGTTACTAG i dasNov3.JH569502 C 0 C 0 e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=269630.000000 s hg38.chr3_KI270779v1_alt 182686 123 + 205312 AATTCAAGATGAGGAAAGACACTAACTCAAGATACCCTTGGAA---TAACAGACCTCTtgtgatctccagcgcctgaaacgagacttggcatacagcagtgacttcgtacacatctgtggaataca--------------- s panTro5.chr3 200169499 123 + 202621043 AATTCAAGATGAGGAAAGACACTAACTCAAGATACCTTTGGAA---TAACTGACctcttgtgatctccagagcctgaaacgagacttggcatacagcagtgacttcatacacatctgtggaatACA--------------- i panTro5.chr3 C 0 I 88 s panPan2.chrUn_NW_014024201v1 126261 123 + 190779 AATTCAAGATGAGGAAAGACACTAACTCAAGATACCTTTGGAA---TAACTGACCTCTtgtgatctccagagcctgaaacgagacttggcatacagcagtgacttcatacacatctgtggaatACA--------------- i panPan2.chrUn_NW_014024201v1 C 0 I 88 s gorGor5.CYUI01000254v1 16901 118 - 189199 AATTCAAGATGAGGAAAGACACTAACTCAAGATACCCTTGGAA---TAACAGACctcttgtgatctccagcacctgaa-----acttggcatacagcagtgacttcatacacatctgtggaatACA--------------- i gorGor5.CYUI01000254v1 C 0 I 12 s nomLeu3.chr11 120929563 123 + 123690457 GATTCAAGATGAGGAAAGACACTAACTCAAGATGCCCTTGGAA---TAACTGACctcttgtgatctccagcgcctgaaacgagacctggcatacagcaatgccttcataaacatctgtggaataca--------------- i nomLeu3.chr11 C 0 I 12 s cebCap1.NW_016107444v1 468516 119 - 6778120 AATTCAAGATGAGGAAAGACACGAGCTCAAGT----CTTGGAA---TAAttgatctcgtggtgtccccagcgcctgaaacaaggcctggcatacaggaatggcttcacgaacgtctgtggaacgca--------------- i cebCap1.NW_016107444v1 C 0 I 21 s aotNan1.NW_018507959v1 28612 120 - 3732694 AATTCAAGATGAGGAAAGACGCTAACTCAAATG---CTTGGAA---TAATCGATCTCATGTtacctccagcgcctgaaacgaggcctggcctacaggaacaacttcacagacgtctgtggaatgca--------------- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 469225 123 - 608964 AATTCAGGATGAGGAAAAACACTTTCTCGAAATGCCCTCAGAA---TAACCGATCTCATGAtatctccagcacctgaaatggtgcctggcatatagtaatttctttaccaacatctgttgaatgaa--------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65465240 100 - 98207768 AATTCAAGACAAGGAAGGAGACTAAATCGAAATACTCGAGAGAGTCTGGCAGATC----------------ACCTGGA----------GCAGACTAGAATGACATCATCGACATCTTTTGCACGCA--------------- i mm10.chr16 C 0 I 2 s dasNov3.JH569502 3940642 136 + 6579706 AAGGCAAGGTGAGGA--GATACTAATTCAAAATGCCCTTAGGG---TAACTGATCTCATAgtatcgtcagcacctagcctggtatctggcatccagtaattacttcccaaacatttgttcaatgaatTGAACTCACTTGCC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29105200 1884 + 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=2300.000000 s hg38.chr3_KI270779v1_alt 182809 1 + 205312 t s panTro5.chr3 200169710 1 + 202621043 T i panTro5.chr3 I 88 C 0 s panPan2.chrUn_NW_014024201v1 126472 1 + 190779 T i panPan2.chrUn_NW_014024201v1 I 88 C 0 s gorGor5.CYUI01000254v1 17031 1 - 189199 T i gorGor5.CYUI01000254v1 I 12 C 0 s nomLeu3.chr11 120929698 1 + 123690457 T i nomLeu3.chr11 I 12 C 0 s aotNan1.NW_018507959v1 28732 1 - 3732694 t i aotNan1.NW_018507959v1 C 0 I 14 s otoGar3.GL873829 469348 1 - 608964 t i otoGar3.GL873829 C 0 I 21 s mm10.chr16 65465342 1 - 98207768 C i mm10.chr16 I 2 C 0 s dasNov3.JH569502 3940778 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29105200 1884 + 31377067 I e cebCap1.NW_016107444v1 468635 21 - 6778120 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=9294.000000 s hg38.chr3_KI270779v1_alt 182810 6 + 205312 CCCAGG s panTro5.chr3 200169711 6 + 202621043 CCCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126473 6 + 190779 CCCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17032 6 - 189199 CCCAGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929699 6 + 123690457 CCCAGG i nomLeu3.chr11 C 0 C 0 s otoGar3.GL873829 469370 4 - 608964 CCCA-- i otoGar3.GL873829 I 21 C 0 s mm10.chr16 65465343 6 - 98207768 CCCAGG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3940779 6 + 6579706 CCCACT i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29105200 1884 + 31377067 I e aotNan1.NW_018507959v1 28733 14 - 3732694 I e cebCap1.NW_016107444v1 468635 21 - 6778120 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=8362.000000 s hg38.chr3_KI270779v1_alt 182816 6 + 205312 CCCTGT s panTro5.chr3 200169717 6 + 202621043 CCCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126479 6 + 190779 CCCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17038 6 - 189199 CCCTGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929705 6 + 123690457 CCCTGT i nomLeu3.chr11 C 0 C 0 s aotNan1.NW_018507959v1 28747 6 - 3732694 CCCTGT i aotNan1.NW_018507959v1 I 14 I 3 s otoGar3.GL873829 469374 6 - 608964 CCTTGT i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65465349 5 - 98207768 CCCTA- i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3940785 4 + 6579706 GCCT-- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29105200 1884 + 31377067 I e cebCap1.NW_016107444v1 468635 21 - 6778120 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=3600.000000 s hg38.chr3_KI270779v1_alt 182822 1 + 205312 G s panTro5.chr3 200169723 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126485 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17044 1 - 189199 G i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929711 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s cebCap1.NW_016107444v1 468656 1 - 6778120 G i cebCap1.NW_016107444v1 I 21 C 0 s aotNan1.NW_018507959v1 28756 1 - 3732694 G i aotNan1.NW_018507959v1 I 3 C 0 s mm10.chr16 65465354 1 - 98207768 G i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3940789 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 469380 1 - 608964 I e canFam3.chr33 29105200 1884 + 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 494115 1492 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=138936.000000 s hg38.chr3_KI270779v1_alt 182823 44 + 205312 GCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGTGACGTT--GC-- s panTro5.chr3 200169724 44 + 202621043 GCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGTGACGTT--GC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126486 44 + 190779 GCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGTGACGTT--GC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17045 44 - 189199 GCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGTGACGTT--GC-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929712 44 + 123690457 GCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGCGACGTT--GC-- i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 495607 44 + 17725628 GCCTTCGGTTTCTTCAGCTGAGGCTGGAGAGAGGGTGAGGCT--GC-- i saiBol1.JH378146 I 1492 C 0 s cebCap1.NW_016107444v1 468657 44 - 6778120 GCCTTTGCTTTCTTCAGCTGAGGCTGGAGAGAGGGTGAGGCT--GC-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28757 44 - 3732694 GCCTTCGGTTTCTTCAGCGGAGGCTGGAGAGAGGGTGAGGCT--GT-- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 469381 46 - 608964 GTCTCTGGTCCCTTCAGCTAAATTTGGAGGAGTGATGAGGTTACAC-- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65465355 43 - 98207768 CCTTTTAGTTCTGTCAG-TGAGGTTGGAGGGAGAATGAGGTG--GC-- i mm10.chr16 C 0 I 2011 s dasNov3.JH569502 3940790 46 + 6579706 GTCTTTGATGTCTTCTGCTGAGGTTGGAGGGGGAATAAGGCT--GTAC i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29105200 1884 + 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=16812.000000 s hg38.chr3_KI270779v1_alt 182867 8 + 205312 CTGtttct s panTro5.chr3 200169768 8 + 202621043 CTGTttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126530 8 + 190779 CTGtttct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17089 8 - 189199 CTGTTTCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929756 8 + 123690457 CTGtttct i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 495651 7 + 17725628 CTGtttc- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 468701 6 - 6778120 Ct-tttc- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28801 7 - 3732694 CTGtttc- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 469427 8 - 608964 CTGTTTCT i otoGar3.GL873829 C 0 I 1572 s dasNov3.JH569502 3940836 8 + 6579706 TTGTTTCT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 29105200 1884 + 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=2120.000000 s hg38.chr3_KI270779v1_alt 182875 2 + 205312 tt s panTro5.chr3 200169776 2 + 202621043 tt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126538 2 + 190779 tt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17097 2 - 189199 TT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929764 2 + 123690457 tt i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 3940844 2 + 6579706 CT i dasNov3.JH569502 C 0 I 1365 e otoGar3.GL873829 469435 1572 - 608964 I e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 29105200 1884 + 31377067 I e aotNan1.NW_018507959v1 28808 0 - 3732694 C e cebCap1.NW_016107444v1 468707 0 - 6778120 C e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e saiBol1.JH378146 495658 0 + 17725628 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=196040.000000 s hg38.chr3_KI270779v1_alt 182877 106 + 205312 atctttatc-------tttttttttttt---gagatggagtctcgctctgtcgcccaggcaggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagT s panTro5.chr3 200169778 109 + 202621043 atctttatc-------tttttttttttttttgagatggagtctcgctctgtcgcccaggcaggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126540 106 + 190779 atctttacc-------tttttttttttt---gagatggagtctcgctctgtcgcccaggcaggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17099 116 - 189199 AtctttatctttatcttttttttttttttttgagatggagtctcgctctgtcgcccaggcaggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929766 108 + 123690457 atctttatc-------tttttttttttt-ttgagatggagtcttgctctgtcgcccagacaggagtgcagtggggtgatctcagcacactgtaacctccgcctcccaggttcaagT i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 495658 96 + 17725628 ----------------tttttcgttttt---gagacggagtcgcgctgtcttgcccaggctgcagtgcagtggcaccatctcagctcactgcagcctccgtctcccgggttc-aGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 468707 95 - 6778120 ----------------tttttctttttt---gagacggagtcttgc-gtcttgcccaggctggagcgcagtggcacgatctcaactcactgcaacctccgtctcccgggttc-aGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 28808 96 - 3732694 ----------------tttttctttttt---gagacggagtctcgctgtcttgcccaggctggagtgcagtggcacgatctcagctcactgcagcctccgtctcccgggttc-aga i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 469435 1572 - 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 3940846 1365 + 6579706 I e canFam3.chr33 29105200 1884 + 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=210754.000000 s hg38.chr3_KI270779v1_alt 182983 74 + 205312 CCCTTCACAGTGGACTCCAAGGCGAGAACTTTACCCGTTCTTTCCAACGATCCCCGCCGAAGTCACACCCCAAC s panTro5.chr3 200169887 74 + 202621043 CCCTTCACAGTGGACTCCAAGGCGAGAACTTTACCTGTTCTTTCCAACGATCCCCGCCAAAGTCACACCCCAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126646 74 + 190779 CCCTTCACAGTGGACTCCAAGGCGAGAACTTTACCTGTTCTTTCCAACGATCCCCGCCAAAGTCACACCCCAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17215 74 - 189199 CCCTTCACAGTGGACTCCAAGGCGAGAACTTTACCTGTTCTTTCCAACGATCCCCGCCGAAGTCACACCCCAAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929874 74 + 123690457 CCCTTCACAGTGGACTCCAAGGCAAGAACTTTATCGGTTCTTTCCAACGATCCCCACCGAAGTCACACCCCAAC i nomLeu3.chr11 C 0 I 27 s saiBol1.JH378146 495754 69 + 17725628 CCCTT--CA---GACTCCAAGGCAAGAACTTCATCTGTTCTTTCAAACTATGCCCACCGAAGTCACGCCCCAAA i saiBol1.JH378146 C 0 I 27 s cebCap1.NW_016107444v1 468802 71 - 6778120 CCCATCACA---GACTCCAAGGCAAGAACTTCATCTGTTCTTTCCAACTCTGCCCGCCGAAGTCACACCCCAAA i cebCap1.NW_016107444v1 C 0 I 27 s aotNan1.NW_018507959v1 28904 57 - 3732694 ccctccACA---GACTC--------------CATCTGTTCTTCCCAACTATGCCCACCGGCGTCACACCCCAAA i aotNan1.NW_018507959v1 C 0 I 27 s otoGar3.GL873829 139012 56 + 608964 CCCTTCATAGCTGATTCCC------------------TTATTTCCAACTATGCCTGCTAAAGTCACACCCTGAC i otoGar3.GL873829 n 1572 I 27 s canFam3.chr33 2270819 74 - 31377067 CCCTTCACAGTTGGCTCCAAGACAAGAACTTTATCTTTTCCTTCTGACTATACCCATCGAAGTCACATTACAAA i canFam3.chr33 n 1884 I 28 s dasNov3.JH569502 2638387 74 - 6579706 CCCTCTCCAGCTTGCTCCAAAGCAGGCACCTGACCTTTTCCTTCAGAGTATACCCGTTGAAGTCTCACCCCAAA i dasNov3.JH569502 n 1365 C 0 e mm10.chr16 65465398 2011 - 98207768 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976502 27 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=523099.000000 s hg38.chr3_KI270779v1_alt 183057 156 + 205312 -------------------CCATGGATCCCACCACCGGTCATTTGACCTCATTTCT-GTCAGCATCTGGTGTGGCAGCACC-CAG-CCACTCTGGTGATCGCCACAGAAGCTCCAGCACCAAACCAA------------------------GAAGCACCAAA-----------------ATCCGGC----------------------TGTGAGCACA-GCAC-----GCCGG-CCAGCTCA-ACTCTC s panTro5.chr3 200169961 161 + 202621043 -------------------CCATGGATCCCACCACCGGTCATTTGACCTCATTTCT-GTCAGCATCTGGTGTGGCAGCACC-CAG-CCACTCTGGTGATCGCCGCAGAAGCTCCAGCACCAAAGCAA------------------------GAAGCACCAAA-----------------ATCCGGC----------------------TGTGAGCACA-GCACAGCACGCCGG-CCAGCTCA-ACTCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126720 161 + 190779 -------------------CCATGGATCCCACCACCGGTCATTTGACCTCATTTCT-GTCAGCATCTGGTGTGGCAGCACC-CAG-CCACTCTGGTGATCGCTGCAGAAGCTCCAGCACCAAACCAA------------------------GAAGCACCAAA-----------------ATCCGGC----------------------TGTGAGCACA-GCACAGCACGCCGG-CCAGCTCA-ACTCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17289 155 - 189199 -------------------CCATGGATCCCACCACCGGTCATTTGACCTCATTTCT-GTCAGCGTCTGGTGTGGCAGCACC-CAG-CCACTCTGGTGATCGCCGCAGAAGCTCCAGCACCCAACCAA------------------------GAAGCACCAAA-----------------ATCCGGC----------------------TGTGAGCACA-GCAC------GCGG-CCAGCTCA-ACTCTC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120929975 157 + 123690457 -------------------CCATGGATCCCACCACCGGTCATTTGACCTCACTTCT-GTCAGCGTCTGTTGTGGCAGCACC-TGG-CCACCCTGGTGATCGCCGCAGAAGCTTCAGCACCAAACCTA------------------------GAAGCACCAAA-----------------ATCCGGC----------------------TGTGAGCACA-GCAC-----ACCGGCCCAGCTCA-ACTCTC i nomLeu3.chr11 I 27 C 0 s calJac3.chr17 976529 155 - 74750902 -------------------CCATGGATATCCCCACAAGCCATTTGACCTCATTTCT-GTCAG-ATCTGGGGTGGCAGCACC-CAG-CCACTCTGGTGATTGCCACAGAAGCTCCAGCACCAAGCCAG------------------------G-AGCGCCAAA-----------------ACCCGGC----------------------TCTGACCACA-GCAC-----ACCAGCCCACCTCA-ACTGTC i calJac3.chr17 I 27 C 0 s saiBol1.JH378146 495850 157 + 17725628 -------------------CCATGGATATCCCCACAGGTCACTTGACCTCATTCCT-GTCAGCACCTGGGGTGGCAGCACC-CAG-CCACTCTGGTGATTGCCACAGAAGCTCCAACACCAAGCCAG------------------------GAAGCACCAAA-----------------ACCCGGC----------------------TTTGACCACA-GCAC-----AGCAGCCCAGCTCA-ACTGTC i saiBol1.JH378146 I 27 C 0 s cebCap1.NW_016107444v1 468900 157 - 6778120 -------------------CCGTGGATATCCCCACAGGTCATTTGACCTCATTTCT-GTCAGCATATGGGGTGGCAGCACC-CAG-CCACTCTGCTGATTGCCACAGAAGCTCCAACACCAAGCCAC------------------------AAAGCACCAAA-----------------ACCCGGC----------------------TTTGACCACG-GCAC-----GCCAGCCCAGCTCA-ACTGTC i cebCap1.NW_016107444v1 I 27 I 36 s aotNan1.NW_018507959v1 28988 156 - 3732694 -------------------CCGTGGACATCCCCACAGGCCATTTGACCTCATTTCT-GTGAGCATCT-GGGTGGCAGCACC-CAG-CCACTCTGGTGATTGCCACAGAAGCTCCAGCCTCAAGCCAG------------------------GAAGCACCGAA-----------------ACCCGGC----------------------TTTGACCACA-GCAC-----GCCAGCCCAGCTCA-ACCGTC i aotNan1.NW_018507959v1 I 27 C 0 s otoGar3.GL873829 139095 220 + 608964 -------------------CCTTGGATATCACCTCAGGTCATTTGACCTCATTCCT-CCCAGCACCTAGTGTAGCAGCACC-TCG-GCACCAGGACCA-AGCCAAGAACCCTCCCCCTCTGAACGAGCTTCTGAAAGACTATCCATTTGATGCAATACCAAATATGTCTTCCCACAGTGATCTTGTCACAATAAGGGGTCAACAGCTATCTGACCACA-GCAC-----ACCAGCCCAACTCCTGCTATC i otoGar3.GL873829 I 27 I 1 s canFam3.chr33 2270921 159 - 31377067 -------------------CCTTGGACGCCATCACAGGTCATTTGACCTAACTTCT-GCCAGCATCC-GTGTAGCAGCACC-AAGATTACCCTGGTGAAAATCCCAGAAGCTCCAGAACCTAGCCAA------------------------GCAGTGTCAAA-----------------ATCCAGC----------------------TTCAACCAGATGTTC-----ACAAGCACAGCTCTGGCTTTC i canFam3.chr33 I 28 C 0 s dasNov3.JH569502 2638461 167 - 6579706 CAGTGCCAGCCTTTCTTCACCTTGGACATTGCCGCAGGTCACTCAACCTCCCTTGTCCCCAGAAGCTGGTGTGGCAACACCTTGG-CTACTCTGGTGATAGCCCCAGAAGGCCCAGGATCAAGCCAA------------------------GAAGCGTCAAA-----------------ACACAGC----------------------TTTGATCAC--GTAC-----ACAAGCACAC----------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=97171.000000 s hg38.chr3_KI270779v1_alt 183213 40 + 205312 TTTTCCCCAACGC----------CTCCTT--CTCGGAGGTGCC--ATCTCCAGT s panTro5.chr3 200170122 40 + 202621043 TTTTCCCCAACGC----------CTCCTT--CTCGGAGGTGCC--ATCTCCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126881 40 + 190779 TTTTCCCCAACGC----------CTCCTT--CTCGGAGGTGCC--ATCTTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17444 40 - 189199 TTTTCCCCAGCGC----------CTCCTT--CTCGGAGGTGCC--ATCTCCAGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930132 40 + 123690457 TTTTCCCCAACGC----------CTCCTT--CTCAGAGGTGCC--ATCTCCCGT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 976684 39 - 74750902 -TTCCCCCAGTGC----------CTCCTT--CTCAGAACTTCC--ATCTCCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 496007 39 + 17725628 -TTTCCCCAGTGC----------CTCCTT--CTCGGAACTTCC--ATCTCCAGG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 29144 39 - 3732694 -TTTGCCCAGTGC----------CCCCTT--CTCGGAACTTCC--ATCTCCAGG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 139316 44 + 608964 TTTTCCTCACACC----------CTCATTTCCTCAGTGAAGCCTGATCTCCAGC i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 2271080 27 - 31377067 TCTTCCCCACCCC----------TTCCTC----------------TTCTCTAG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2638628 50 - 6579706 TTTTTCCTCACGCTATAACCCTATTCCTC--CTCAGAAGTTTG--ACCTCCAGC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e cebCap1.NW_016107444v1 469057 36 - 6778120 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=350085.000000 s hg38.chr3_KI270779v1_alt 183253 92 + 205312 CTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCC---ACTGGGGCAGGCA---CATCCTCCTAGCCTAGCGCTGTCCTCAGGAGCCTGGCT s panTro5.chr3 200170162 92 + 202621043 CTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCC---ACTGGGGCAGGCA---CATCCTCCTAGCCTAGCGCTGTCCTCAGGAGCCTGGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 126921 92 + 190779 CTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCC---ACTGGGGCAGGCA---CATCCTCCTAGCCTAGCGCTGTCCTCAGGAGCCTGGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17484 92 - 189199 CTCCACCATCTTGGTGTTGCCACCCACCTCT-CCTGGCTCCC---ACTGGGGCAGGCA---CATCCTCCTAGCCTAGCGCTGTCCTCAGGAGCCTGGCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930172 92 + 123690457 CTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCC---ACCAGGGCAGGCA---CATCCTCTTAGCCTAGGGCTGTCCTCAGGAGCCTAGCT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 976723 90 - 74750902 CTCCG-CGTCTTGCTGTTGGCGCCCGTCTCT-CCTGGCTCCCG--CCTGAGGCGGCCA---CCCCCTCCTAGCCTAGGGCTGTCCTCAGGA--GCTGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 496046 92 + 17725628 CTCCGCCATCCTGGTGTTGGCGCCCGTCTCT-CCTGGCTCCC---CCTGAGGCAGCCA---CACCCTCCTAGCCTAGGGCTGTCCTCAGGAACGTGAGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469093 93 - 6778120 CTCCGCCATCCTTGTGTTGGCGCCCGTCTCT-CCTGGCTCCCG--CCTGAGGCAGCCA---CACCCTCCTAGCCTAGGGCTGTCCTCGGGAACTTGGCT i cebCap1.NW_016107444v1 I 36 C 0 s aotNan1.NW_018507959v1 29183 93 - 3732694 CTCCGCCGTCTGGGTGTCGGCGCCCATCTCT-CCTGGCTCCCG--CCTGAGGCAGCCA---CACCCTCCTAGCCTAGGGCTGTCCTCAGGAGCTTGGCT i aotNan1.NW_018507959v1 C 0 I 210 s otoGar3.GL873829 139360 95 + 608964 CTCCACCATCTTGGTGCTGGAGCCCATACCT-CCCAGCTCCCGAATCTGATGCAGGCA---TACCCTCTTGGCCTGGGGTTGTCCTCAGGAGCTTGGCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 2271107 85 - 31377067 --------GCTTGGGTTTAGAGCTCATCTCTCCCTGGCTCCCC--TCCGAGGCAGGCA---C-CCCTCCTAGTCTAGGGTTGCCCTCAGGAATTTGGCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2638678 95 - 6579706 CTCCACCATCTGGACCTTTGAGCTTGTCTCT-CCTGCTTCCA---TATGCGTCAGGCATGCCCTCCTCCTTGTGCAGGGTCACCCTTAGGAGCTTGGCT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=9913.000000 s hg38.chr3_KI270779v1_alt 183345 4 + 205312 GCCT s panTro5.chr3 200170254 4 + 202621043 ACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127013 4 + 190779 ACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17576 4 - 189199 ACCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930264 4 + 123690457 ACCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 976813 4 - 74750902 CTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 496138 4 + 17725628 ATCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469186 4 - 6778120 GTCT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 139455 4 + 608964 ACCT i otoGar3.GL873829 C 0 n 0 s canFam3.chr33 2271192 4 - 31377067 ATCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 2638773 4 - 6579706 ACCT i dasNov3.JH569502 C 0 n 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29276 210 - 3732694 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=23704.000000 s hg38.chr3_KI270779v1_alt 183349 10 + 205312 -CT-CCACAGTG s panTro5.chr3 200170258 10 + 202621043 -CT-CCACAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127017 10 + 190779 -CT-CCACAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17580 10 - 189199 -CT-CCACAGTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930268 10 + 123690457 -CT-CCACAGTG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 976817 11 - 74750902 -CTGCCACAGTG i calJac3.chr17 C 0 I 684 s saiBol1.JH378146 496142 11 + 17725628 -CTGCCACAGTG i saiBol1.JH378146 C 0 I 17 s cebCap1.NW_016107444v1 469190 11 - 6778120 -CTGCCACAGTG i cebCap1.NW_016107444v1 C 0 I 195 s canFam3.chr33 2271196 12 - 31377067 TCTGCTACAGTT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e aotNan1.NW_018507959v1 29276 210 - 3732694 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=3279.000000 s hg38.chr3_KI270779v1_alt 183359 2 + 205312 GT s panTro5.chr3 200170268 2 + 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127027 2 + 190779 GT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17590 2 - 189199 GT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930278 2 + 123690457 GT i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 496170 2 + 17725628 GC i saiBol1.JH378146 I 17 C 0 s canFam3.chr33 2271208 2 - 31377067 GT i canFam3.chr33 C 0 n 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e aotNan1.NW_018507959v1 29276 210 - 3732694 I e cebCap1.NW_016107444v1 469201 195 - 6778120 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976828 684 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=110369.000000 s hg38.chr3_KI270779v1_alt 183361 117 + 205312 TA--------GCCTCGGGCTGTCCTGG--------------------------------------------------TGTGGTGGTGTGTGCCTGTGATCCCAGTTG-----------GAAtcaagtgcttctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatctcct s panTro5.chr3 200170270 117 + 202621043 TA--------GCCTCGGGCTGTCCTGG--------------------------------------------------TGTGGTGGTGTGTGCCTGTGATCCCAGTTG-----------GAAtcaagcgcttctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatcccct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127029 117 + 190779 TA--------GCCTCGGGCTGTCCTGG--------------------------------------------------TGTGGTGGTGTGTGCCTGTGATCCCAGTTG-----------GAAtcaagcgcttctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatcccct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17592 117 - 189199 TA--------GCCTCGGGCTGTCCTGG--------------------------------------------------TGTGGTGGTGTGTGCCTGTGATCCCAGTTG-----------GAAtcaagcacttctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatcccct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930280 117 + 123690457 TA--------GCTTTGGGCTGTCTTGG--------------------------------------------------TGTGGTGGCGTGTGCCTGTGATCCCAGTTG-----------GAAtcaagcgattctcctgcctcagcctcctaaatagctgggattacaggtgcccaccaccatcccct i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378146 496172 175 + 17725628 TACAGCCATTGCTTTGGCCTCTCCTGGCCCCAGAACTTCCGTGACAGTCACAGGAGAACAGGCAACCTGAagctggatgtggtggttcacgcccgaaattccagctactcaggacactgaggcaggagaatcgcctgaTTC-----------Caactgggatcacaggcacatgccactacgcccg i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e aotNan1.NW_018507959v1 29276 210 - 3732694 I e cebCap1.NW_016107444v1 469201 195 - 6778120 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976828 684 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=30594.000000 s hg38.chr3_KI270779v1_alt 183478 15 + 205312 gctaatttttgtatt s panTro5.chr3 200170387 15 + 202621043 gctaatttttgtatt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127146 15 + 190779 gctaatttttgtatt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17709 14 - 189199 gctaatttttgta-t i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120930397 15 + 123690457 gctaatttttgtatt i nomLeu3.chr11 C 0 M 1820 s saiBol1.JH378146 496347 15 + 17725628 gctaatttttttatt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469396 15 - 6778120 gctaattttttaatt i cebCap1.NW_016107444v1 I 195 C 0 s aotNan1.NW_018507959v1 29486 15 - 3732694 gctaatttttttatt i aotNan1.NW_018507959v1 I 210 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976828 684 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C a score=160856.000000 s hg38.chr3_KI270779v1_alt 183493 88 + 205312 tttagtagagacggggttttgccatgttggccagtctggtctcaaactcctgacctcaagtgatctgcccgcttcagcttcccagagt s panTro5.chr3 200170402 88 + 202621043 tttagtagagagagggttttgccatgttggccaggctggtctcgaactcctgacctcaagtgatctgcccgcttcagcttcccagagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127161 88 + 190779 tttagtagagacagggttttgccatgttggccaggctggtctcgaactcctgacctcaagtgatctgcccgcttcagcttcccagagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17723 88 - 189199 tttagtagagacggggttttgccatgttggccagtctggtctcgaactcctgacctcaagtgatctgcccgcttcagcttcccagagt i gorGor5.CYUI01000254v1 C 0 C 0 s saiBol1.JH378146 496362 88 + 17725628 tttagtagagatggggttttaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcttcccagagg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469411 88 - 6778120 tttagtagagacggggtttcgccatgttggccaggctggtctcgaactcctgacctcaagtgatctgcccacttcagcttcccagagt i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 29501 88 - 3732694 tttagtagaggtggggtttcgccatgttggccaggctgctcttgaactcctgacctcaagtgatctgcccacttcagcttcccagaat i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e macNem1.NW_012014355v1 603026 0 + 19675229 C e calJac3.chr17 976828 684 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650091 0 - 1977891 C e chlSab2.chr15 466105 0 - 91754291 C e cerAty1.NW_012004056v1 535281 0 + 16847902 C e macFas5.chr2 116586 0 + 192460366 C e rheMac8.chr2 202511173 0 + 204787373 C e nomLeu3.chr11 120930412 1820 + 123690457 M a score=426105.000000 s hg38.chr3_KI270779v1_alt 183581 71 + 205312 gctgggatgacagccatgagtcactgtgcctggccTTGTCTGT-CATTTCAATTACTCAAAATCCATAATCT s panTro5.chr3 200170490 71 + 202621043 gctgggatgacaggcatgagccactgtgccaggccTTGTCTGT-CATTTTAATTACTCAAAATCCATAATCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127249 71 + 190779 gctgggatgacaggcatgagccactgtgccaggccTTGTCTGT-CATTTTAATTACTCAAAATCCATAATCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17811 71 - 189199 gctgggatgacagccatgagtcactgtgcctggccTTGTCTGT-CATTTTAATTACTCAAAATCCATAATCT i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202511173 71 + 204787373 GCTGGGGTGACAGGCATGAGCCACCATGACCAGCCTTGTCTGT-CATTTTAGTTACTCAAAATCCATAATCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116586 71 + 192460366 GCTGGGGTGACAGGCATGAGCCACCATGACCAGCCTTGTCTGT-CATTTTAGTTACTCAAAATCCATAATCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603026 71 + 19675229 GCTGGGGTGACAGGCATGAGCCACCATGACCAGCCTTGTCTGT-CATTTTAGTTACTCAAAATCCATAATCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535281 71 + 16847902 GCTGGGGTGACAGGCATGAGCCACCATGCCCGGCCTTGTCTGT-CATTTTAGTTACTCAAAATCCATAATCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466105 71 - 91754291 GCTGGGGTGACAGGCATGAGCCACCATGCCCGGCCTTGTCTGT-CATTTTAGTTACTCAAAATCCATAATCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650091 71 - 1977891 GCTGGGGTGACAGGCATGAGCCACCATGCCCGGCCTTGTCTGT-CATTTTAGTTACTCAAAATCCATAATCT i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 496450 72 + 17725628 gctgggattacaggcttgagccacaacacctggccTTGTCTGTCCATTTTAGTTACTCAAAATCCATAATCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469499 65 - 6778120 gctgggattacaggcttgagccactgcacctggccTTGTCTGTCCATTTTAGTTACT-------CATAATCT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 29589 72 - 3732694 gctgggattacaggcttgagccacaacacctgaccTTGTCTGTCCATTTTAGTTACTCAAAATCCATAATCT i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e calJac3.chr17 976828 684 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e nomLeu3.chr11 120930412 1820 + 123690457 M a score=126329.000000 s hg38.chr3_KI270779v1_alt 183652 25 + 205312 Gggccgggcgcagtggctcacactg s panTro5.chr3 200170561 25 + 202621043 Gggccgggcgcagtggctcacactg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127320 25 + 190779 Gggccaggcgcagtggctcacactg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17882 25 - 189199 Gggccgggcgcagtggctcacactg i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202511244 25 + 204787373 Gggtcgggcacagtggcttacaccg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116657 25 + 192460366 Gggtcgggcacagtggcttacaccg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603097 25 + 19675229 Gggtcgggcacagtggcttacaccg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535352 25 + 16847902 Gggtcaggcgcagtggctcacactg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466176 25 - 91754291 Gggtcgggcacagtggctcacacca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650162 25 - 1977891 Gggtcgggcgcagtggctcacacca i manLeu1.NW_012102020v1 C 0 C 0 s saiBol1.JH378146 496522 25 + 17725628 Gggccaggtgcagtggctcatgcct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469564 25 - 6778120 Gggccaggtgcagtggctcatgcct i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e calJac3.chr17 976828 684 - 74750902 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e nomLeu3.chr11 120930412 1820 + 123690457 M a score=234286.000000 s hg38.chr3_KI270779v1_alt 183677 37 + 205312 gtaatcccagcactttgggaggccaaggtaagcagat s panTro5.chr3 200170586 37 + 202621043 gtaatcccagcactttgggaggccaaggtaagcagat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127345 37 + 190779 gtaatcccagcactttgggaggccaaggtaagcagat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17907 37 - 189199 gtaatcccagcactttgggaggccaaggtaagcagat i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202511269 37 + 204787373 ggaatcccagcactttgggaagccaaagtgggcagat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116682 37 + 192460366 ggaatcccagcactttgggaagccaaagtgggcagat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603122 37 + 19675229 ggaatcccagcactttgggaagccaaagtgggcagat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535377 37 + 16847902 ggaatcccagcactttgggaagccaaggtgggcagat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466201 37 - 91754291 ggaatcccagcactttgggaggccaaggtgggcagat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650187 37 - 1977891 ggaatcccaacactttgggaagccaaggtgggcagat i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 977512 37 - 74750902 gtaaacccagcactttgggaggctgaaatgggcagat i calJac3.chr17 I 684 C 0 s saiBol1.JH378146 496547 37 + 17725628 gcaatcccagcactttgggaggctgaagtgggcagat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469589 37 - 6778120 gtaatcccagcactttgggaggctgaagtgggcagat i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e nomLeu3.chr11 120930412 1820 + 123690457 M a score=1655232.000000 s hg38.chr3_KI270779v1_alt 183714 236 + 205312 cacttgaggtcaggagttcgagactagcctgaccaacatggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcatgtgcctgtgatcccagctactcggggggctgaggcacgagaatcccttgaaccctggaggcagaggttgcagtgagccgagataacgccacagcacttcagcctgggtgacacagtgagactctgtctcaaaaatataaataaa s panTro5.chr3 200170623 236 + 202621043 tacttgaggtcaggagtttgagactagcctgaccaacatggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcatgtgcctgtgatcccagctactcggggggctgaggcacaagaatcccttgaaccctggaggcaaaggttgcagtgagccgagataacgccacagcacttcagcctgggtgacacagtgagactctgtctcaaaaatataaataaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127382 236 + 190779 cacttgaggtcaggagtttgagactagcctgaccaacatggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcatgtgcctgtgatcccagctactcggggggctgaggcacaagaatcccttgaaccctggaggcaaaggttgcagtgagccgagataacgccacagcacttcagcctgggtgacacagtgagactctgtctcaaaaatataaataaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 17944 235 - 189199 cacttgaggtcaggagttcgagactagcctgaccaacatggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcatgtgcctgtgatcccagctactcggggggctgaggcacgagaatcccttgaaccctggaggcagaggttgcagtgagccgagatagcgccacagcacttcagcctgggtgacacagtgagactctgtctc-aaaatataaataaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932232 234 + 123690457 cactggaggtcaggagttggagactagcgtgaccagcagggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgtctgtaatcccagctactccagaggctgaggcacgagaatctcttgaaccctggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctgggtgacccagtgaga--ctgtctcaaaaatataaataaa i nomLeu3.chr11 M 1820 C 0 s rheMac8.chr2 202511306 232 + 204787373 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggccgaggcacaagaatctcttgaaccgtggaggtggaggttgcggtgagccaagatcacgccactgccgtcc--cctgggtgacacagtgaga--ctgtctcaaaaatataaataaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116719 232 + 192460366 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggccgaggcacaagaatctcttgaaccctggaggtggaggttgcggtgagccaagatcacgccactgccctcc--cctgggtgacacagtgaga--ctgtctcaaaaatataaataaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603159 232 + 19675229 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggccgaggcacaagaatctcttgaaccctggaggtggaggttgtggtgagccaagatcacgccactgccctcc--cctgggtgacacagtgaga--ctgtctcaaaaatataaataaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535414 232 + 16847902 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggccgaggcacgagaatctcttgaaccctggaggtggaggttgcggtgagccgagatcacgccactgccctcc--cctgggtgacacagtgaga--ctgtcttaaaaatataaataaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466238 229 - 91754291 cacttgaggtcaggagtttgagaccaccctggccaaca---tgaaaccccatttctactaaaaatacaaaaatcagcagagcatagtggcgtgtgcctgtaatcccagctactcgggaggctgaggcacgagaatctcttgaaccctggaggcggaggttgcagtgagctgagatcacgccactgcactcc--cctgggtgacacagtgaga--ctgtctcaaaaatacaaataaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650224 232 - 1977891 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggctgaggcacgagaatctcttgaaccctggaggtggaggttgcggtgagccgagatcacgccactgccctcc--cctgggtgacacagtgaga--ctgtcttaaaaatataaataaa i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 977549 230 - 74750902 cacttgaggtcaggagttcgagaccagcctgggcaacatggcgaaaccccatctctactaaaaatacaaaagttagcagagcatggtggtgcatgcatgtaatcccagccacttgggaggctgaggcaggagaacctcttgaacctggaagccagaggttgcagtaagccaagatcacaccactgtactccagcctgggtgacacagt--gactctgtctcaaaaat----acaaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 496584 229 + 17725628 cacatgaagtcaggagttcgagaccaacctggccaacatggcgaaaccccatctctactaaaaataaaaaaatt---agagcatggcggtgcatgcctgtaatcccagccacttgggagtctgaggcaggagaacctcttgaacctggaagctggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacacagtgagactctgtctcaaaaac----ataaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469626 232 - 6778120 cacttgaggtcaggagttggagaccagcctggccaacgtggcgaaaccccatttctactaaaaacacaaaaattagcagagcatggtggtgcatgcctgtaatcccagccacttgggaggctgaggcaggagaacctcttgaacctggaagccggaggttgcagtgagccgagatcacaccactgcactccagcctgggccacacagtgagactctgtctcaaaaat----ataaa i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 2638777 0 - 6579706 I e canFam3.chr33 2271210 0 - 31377067 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=75243.000000 s hg38.chr3_KI270779v1_alt 183950 10 + 205312 taaaataaca s panTro5.chr3 200170859 10 + 202621043 taaaataaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127618 10 + 190779 taaaataaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18179 10 - 189199 taaaataaca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932466 10 + 123690457 taaaataaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511538 10 + 204787373 taaaataaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116951 10 + 192460366 taaaataaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603391 10 + 19675229 taaaataaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535646 10 + 16847902 taaaataaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466467 10 - 91754291 taaaataaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650456 10 - 1977891 taaaataaca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 977779 10 - 74750902 taaaatagaa i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 496813 10 + 17725628 taaaatagaa i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469858 10 - 6778120 taaaatagaa i cebCap1.NW_016107444v1 C 0 C 0 s dasNov3.JH569502 3942211 10 + 6579706 taaggtcacc i dasNov3.JH569502 I 1365 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=10920.000000 s hg38.chr3_KI270779v1_alt 183960 1 + 205312 t s panTro5.chr3 200170869 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127628 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18189 1 - 189199 t i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932476 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511548 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116961 1 + 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603401 1 + 19675229 t i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535656 1 + 16847902 t i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466477 1 - 91754291 t i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650466 1 - 1977891 t i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 977789 1 - 74750902 t i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 496823 1 + 17725628 t i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 469868 1 - 6778120 t i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29107084 1 + 31377067 t i canFam3.chr33 I 1884 C 0 s dasNov3.JH569502 3942221 1 + 6579706 t i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 139459 0 + 608964 I e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=1611239.000000 s hg38.chr3_KI270779v1_alt 183961 218 + 205312 aaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCGATCTAacacctgcct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcct-ctgcctg-ctcagg----------------cctgg----caccttct-------------ccacctggct---gtc--ctc---agcctcaggc-ctcagctc-cccgcagaacggttcctcacagggccc-ttcct-gacttgt------------------------------cagtc s panTro5.chr3 200170870 218 + 202621043 aaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCGATCTAacacctgcct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcct-ctgcctg-ctcagg----------------cctgg----caccttct-------------ccacctggct---gtc--ctc---agcctcaggc-ctcagctc-cccgcacagcggttcctcacagggccc-ttcct-gacttgt------------------------------cagtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127629 218 + 190779 aaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCGATCTAacacctgcct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcct-ctgcctg-ctcagg----------------cctgg----caccttct-------------ccacctggct---gtc--ctc---agcctcaggc-ctcagctc-cccgcacagcggttcctcacagggccc-ttcct-gacttgt------------------------------cagtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18190 218 - 189199 aaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCGATCTAacacctgcct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcct-ctgcctg-ctcagg----------------cctgg----caccttct-------------ccacctggct---gtc--ctc---agcctcaggc-ctcagctc-cccgcacagcggttcctcacagggacc-ttcct-gacttgt------------------------------cagtc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932477 216 + 123690457 aaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGTGCGATCTAacacttgtct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcct-ctgcctg-ctcagg----------------cctgg----cactttct-------------ccacctggct---gtc--ctc---agcctcaggc-ctcagctc-cccgcacagcagttcctcacaggggcc-ttcct-gact--t------------------------------cagtc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511549 217 + 204787373 aaaaTTCATAATCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCGCCT-CTGCCTG-CTCAGG----------------CCTGG----CACTTTC--------------CCACCCAGCT---GTC--CTC---AGCCTCAGGC-CTCAGCTC-CCCCCAGAGCCGTTCCTCACAGGGGCC-TTCCT-GACTTGT------------------------------CAGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 116962 217 + 192460366 aaaaTTCATAATCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCGCCT-CTGCCTG-CTCAGG----------------CCTGG----CACTTTC--------------CCACCCAGCT---GTC--CTC---AGCCTCAGGC-CTCAGCTC-CCCCCAGAGCCGTTCCTCACAGGGGCC-TTCCT-GACTTGT------------------------------CAGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603402 217 + 19675229 aaaaTTCATAATCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCGCCT-CTGCCTG-CTCAGG----------------CCTGG----CACTTTC--------------CCACCCAGCT---GTC--CTC---AGCCTCAGGC-CTCAGCTC-CCCCCACAGCAGTTCCTCACAGGGGCC-TTCCT-GACTTGT------------------------------CAGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535657 247 + 16847902 aaaaTTCATAATCTGTTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCGCCT-CTGCCTG-CTCAGG----------------CCTGG----CACTTTC--------------CCACCCGGCT---GTC--CTC---AGCCTCAGGC-CTCAGCTC-CCCCCACAGAAGCTCCTCACAGGGGCC-TTCCT-GACTTGTCAGTCAGACGCAGGGGCCTTCCTGATTTGCCAGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466478 217 - 91754291 aaaaTGCATAATCTATTCCAAAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCACCT-CTGCCTG-CTCAGG----------------CCTGG----CACTTTC--------------CCACCCAGCT---GCC--CTC---AGCCTCAGGC-CTCAGCTC-CCCCCACAGCAGTTCCTCACAGGGGCC-TTCCT-GAC------------------------------TTGTCAGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650467 247 - 1977891 aaaaTTCATAATCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCTGCCT-CTGCCTG-CTCAGG----------------CCTGG----CACTTTC--------------CCACCCAGCT---GTC--CTC---AGCCTCAGGC-CTCAGCTC-CCCCCACAGAAGCTCCTCACAGGGGCC-TTCCT-GACTTGTCAGTCAGACGCAGGGGCCTTCCTGATTTGTCAGTC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 977790 191 - 74750902 aaaaTCCGTAATCTATTCCACAGCTTGCAAGGCCCTGTACAATctcacacctgcct---------------------------gtctctttcctgcctctccatgtgctcctcct-ctgcctg-ctcagg----------------cctgg----cgccttct-------------ccatctggct---ctc--ctc---agcctcaggc-ctcactca-ccgacacagcacct-ctcccagaggtc-ttcct-gacttgt------------------------------ccatg i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 496824 204 + 17725628 aaaCTCCATAATCTATTCCACAGCTTGCAAGGCCCTGTACAATCTCACACCTGCCT---------------------------GTCTcttccctgcctctccgtgtgcacctcgt-ccgcctg-ctcaggcctggcaccttttccacctgg----caccttct-------------ccacctggct---ctc--ctc---agcctca-gc-ctcactcg-ctggcacagcac---ctcacagaggcc-ttgct-gactcgt------------------------------ccatc i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 469869 191 - 6778120 aaaaTCCATAATGTATTCCACAGCTTGCAAGACCCTGTACAATCTCACACCTGCCT---------------------------GTCTCTTTCCTgcctctccgtgtgctccccct-cggcccg-ctcagg----------------ccccg----caccttct-------------ccgcctggct---ctc--ctc---agcctcgggc-ctcactgg-ccggcacagcgcct-ctcacagaggcc-ttgct-gactcgt------------------------------ctgtc i cebCap1.NW_016107444v1 C 0 I 23 s otoGar3.GL873829 471007 223 - 608964 agattccataatccattccatagtgtacgaggccaggtgtaatccggcacttgcctacctctgtcaggtcctccaaaaggccaagtcccatcctgtctctccacaggctctggtc-ctgccta-ctcaca----------------ttcag----caccttct-------------ctatctggct---tcc--tccccaggcttcaggt-gtcagctcaaatgtaccacacttcccctgagaggcc-ttcct-ggcttgc------------------------------taata i otoGar3.GL873829 I 1572 I 1 s canFam3.chr33 29107085 222 + 31377067 aaaacccacaatccgctccatggctcac-aggtcctgcgtgctctagcccgtgcctacctctctCAGATCCTTCCAA--GTCAAGccttctcccgcccctgtgca---tcttccc-ctgcctg-----------------------gctgg----tgcttcttcactcccctgcccccatctggct---tacaactc---agccttctcctctcagctc-aaagaaaagcacttggtc--agaggcc-ctcctggacttca------------------------------tgatc i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3942222 230 + 6579706 aaaatccaccatccactccatggttttcaagaccctgaccaacctagcacctgctcccctcttctaagtcctccgaagggtcaggctctctcctgatccaccatgggctcttcctcctgtctgactcatg----------------tttcagccccatattct-------------ccacccagcttaggac--ctg---accctccggt-ctcagctcgtatatacagcactttctcagagagatctttccc-gcctccc------------------------------taatc i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=132377.000000 s hg38.chr3_KI270779v1_alt 184179 28 + 205312 -agatgcacctcccctactctctggccat s panTro5.chr3 200171088 28 + 202621043 -agatgcacctcccctactctctggccat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127847 28 + 190779 -agatgcacctcccctactctctggccat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18408 28 - 189199 -agatgcacctcccctactctctggccat i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932693 28 + 123690457 -agatgcagctcccgtactctctggccat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511766 28 + 204787373 -AGATGCAGTTCCCGTACTCTCTGGCCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117179 28 + 192460366 -AGATGCAGTTCCCGTACTCTCTGGCCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603619 28 + 19675229 -AGACGCAGTTCCCGTACTCTCTGGCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535904 28 + 16847902 -AGACGCAGTTCCCGTACTCTCTGGCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466695 28 - 91754291 -AGTTGCAGTTCCCGTACTCTCTGGCCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650714 28 - 1977891 -AGACGCAGTTCCCGTACTCTCTGGCCAT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 977982 23 - 74750902 -acatgcag-tcccctcctctgtag---- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 497029 22 + 17725628 -acatgcag--cccctcctctctag---- i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 471231 20 - 608964 -aaatgaagctcccctattac-------- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29107308 20 + 31377067 -aaatgaggtctccctatttt-------- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3942452 21 + 6579706 taatcaaaacccccctacttt-------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e cebCap1.NW_016107444v1 470060 23 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=1638686.000000 s hg38.chr3_KI270779v1_alt 184207 191 + 205312 tcgaaatgcagctctcagcacaccctgtactt-t-tccacactgcatttaccacatgtgcagttgagaacatttccgtaattatttgatgtctgtctgcac-c-aagattttagtgccaagagactgggccacgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta s panTro5.chr3 200171116 191 + 202621043 tcgaaatgcagctctcaggacaccctgtactt-t-tccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-c-aagattttagtgccaagagactgggccacgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 127875 191 + 190779 tcgaaatgcagctctcaggacaccctgtactt-t-tccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-c-aagattttagtgccaagagactgggccacgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18436 191 - 189199 tcgaaatgcagctctcagcacaccctgtactt-t-tccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-c-aagattttagtgccaagagactgggccacgtctgtttcactcttcactgtgtgcatccagtgctgtgttctagaacaatgtcaggaactta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932721 191 + 123690457 tcgaaatgcagctcttagcacaccctgtactt-t-tccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-c-aagattttagtgccaagagactgggccatgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaagaactta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511794 189 + 204787373 TCAAAATGCAGCTCTCAG--CACCCTGAACTT-T-CCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-t-aagattttagtgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117207 189 + 192460366 TCAAAATGCAGCTCTCAG--CACCCTGAACTT-T-CCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-t-aagattttagtgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603647 189 + 19675229 TCAAAATGCAGCTCTCAG--CACCCTGAACTT-T-CCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-t-aagattttagtgccaagagactgggccatgtctgtttcattcttcactgtgtgcgtccagtgctgtgtcctagaacaatgtcaggaactta i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 535932 189 + 16847902 TCAAAATGCAGCTCTCAG--CACCCTGAACTT-T-CCCACCCTGCGTTTACCACATGCGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-c-aagattttagcgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466723 189 - 91754291 TCAAAATGCAGCTCTCAG--CACCCTGAACTT-T-CCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-c-aagattttagcgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650742 189 - 1977891 TCAAAATGCAGCTCTCAG--CACCCTGAACTT-T-CCCACCCTGCGTTTACCACATGCGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-c-aagattttagcgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaactta i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 978005 186 - 74750902 tccaaatgcggcttcca---cctcctgcgcat-t-tccacgctgcattttccacgtgtgcaggtgggaacatttctgtaattacttaatgtctgtctgccc-c-aggatttcagcgccgaaagactgggccacgtctgtttcattcttcactgtgcacattcagcac--tgtcccagaacaatgccagggactca i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 497051 185 + 17725628 tccaaatgcagctgcca---cctcctgtgctt-t-tccacgttgca-tttacacatacgcagttgggaacatttctgcaattacttaatgtctgtctgcac-c-aggatttcagcgccgagagactgggccacgtctgtttcattcttcactgtgcacatccagcac--tgccctagaacaatgccaggaactca i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 470083 185 - 6778120 tccaaatgcagcttcca---cctcctgcgctt-t-tccac-ttgcatttaccacgtgtgcagttgggagcatttctgtagttacttaatgtctctttgcac-c-aggatttcagcgccgagagactgggccacgtctgtttcattcttcactgtgcacacccagcac--tgtcctagaacaatgccaggcatttc i cebCap1.NW_016107444v1 I 23 I 27 s otoGar3.GL873829 471251 174 - 608964 ----------actctcatcgtgtcctaaacctag-tctacctcgcatttaccacatctgcagatgagaacttttctgtgattatttaatgtctgtctgcat-agaacatcttagctccaggaggccaggccatgtctgtttcattttccgctgtgcacatccagtat--tgccct-----aatgttaggtaca-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29107328 167 + 31377067 ----------actcttat--cagatt--actt-g-ttcaa--tgcg-ataccacatttgtagatgggaatttgtctgtaattattttatgtctttctgcgtat-tagatcttagctccacgaggctgggccctgtcagttccgtccctcactgtgtacacacagtgc--tgctctagaacaatgttggg------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942473 181 + 6579706 ----------gctctcattgcacctggtactt-catcaacatagcacttatcgcatttgtagtcgggagtttttctgtaatttcttaatgtctacctgtatat-tagagcttggctgcaggaagctgggcggtatctgtctcattcttcactgtatacacccagtgc--tgcccttgaacagtggcaggctcttg i dasNov3.JH569502 C 0 I 2 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=138167.000000 s hg38.chr3_KI270779v1_alt 184398 20 + 205312 aggcaggcgtttcctaaatg s panTro5.chr3 200171307 20 + 202621043 aggcaggcgtttcctaaatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128066 20 + 190779 aggcaggcgtttcctaaatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18627 20 - 189199 aggcaggtgtttcctaaacg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932912 20 + 123690457 aggcaggcgtttcctaaata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202511983 20 + 204787373 aggcaggcgtttcctaaacg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117396 20 + 192460366 aggcaggcgtttcctaaacg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603836 20 + 19675229 aggcaggcgtttcccaaacg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536121 20 + 16847902 aggcaggcatttcctaaacg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466912 20 - 91754291 aggcaggcgtttcctaaatg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 650931 20 - 1977891 aggcaggcatttcctaaacg i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 978191 20 - 74750902 aggtaggcatttcctaaatg i calJac3.chr17 C 0 I 12 s saiBol1.JH378146 497236 20 + 17725628 aggtaggcatttcctaagtg i saiBol1.JH378146 C 0 I 16 s otoGar3.GL873829 471425 20 - 608964 cggaagacagtccttatgta i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29107495 13 + 31377067 -------cgctccttaaata i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942656 16 + 6579706 aggcaggcatgagata---- i dasNov3.JH569502 I 2 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e cebCap1.NW_016107444v1 470268 27 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=-986.000000 s hg38.chr3_KI270779v1_alt 184418 2 + 205312 gt- s panTro5.chr3 200171327 2 + 202621043 gt- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128086 2 + 190779 gt- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18647 2 - 189199 gt- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932932 1 + 123690457 g-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512003 2 + 204787373 gc- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117416 2 + 192460366 gc- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 603856 2 + 19675229 gt- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536141 2 + 16847902 gt- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 466932 2 - 91754291 gt- i chlSab2.chr15 C 0 I 237 s manLeu1.NW_012102020v1 650951 2 - 1977891 gt- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 978223 2 - 74750902 gt- i calJac3.chr17 I 12 C 0 s saiBol1.JH378146 497272 2 + 17725628 at- i saiBol1.JH378146 I 16 C 0 s cebCap1.NW_016107444v1 470295 2 - 6778120 at- i cebCap1.NW_016107444v1 I 27 C 0 s otoGar3.GL873829 471445 1 - 608964 -c- i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29107508 2 + 31377067 gt- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942672 2 + 6579706 -tt i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=9662.000000 s hg38.chr3_KI270779v1_alt 184420 5 + 205312 ggttt s panTro5.chr3 200171329 5 + 202621043 ggttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128088 5 + 190779 ggttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18649 5 - 189199 ggttt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932933 2 + 123690457 ---tt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512005 5 + 204787373 tgttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117418 5 + 192460366 tgttT i macFas5.chr2 C 0 I 128 s macNem1.NW_012014355v1 603858 5 + 19675229 tgttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536143 5 + 16847902 tgttg i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 650953 5 - 1977891 tgttg i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 978225 4 - 74750902 -gaat i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 497274 4 + 17725628 -gtat i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 470297 4 - 6778120 -gaat i cebCap1.NW_016107444v1 C 0 I 1 s otoGar3.GL873829 471447 5 - 608964 tgttt i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29107510 2 + 31377067 ---tt i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942674 5 + 6579706 ggctg i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e chlSab2.chr15 466934 237 - 91754291 I a score=26772.000000 s hg38.chr3_KI270779v1_alt 184425 3 + 205312 aat s panTro5.chr3 200171334 3 + 202621043 aat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128093 3 + 190779 aat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18654 3 - 189199 aat i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932935 3 + 123690457 aat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512010 3 + 204787373 aat i rheMac8.chr2 C 0 I 125 s macFas5.chr2 117551 3 + 192460366 aat i macFas5.chr2 I 128 I 1 s macNem1.NW_012014355v1 603863 3 + 19675229 aat i macNem1.NW_012014355v1 C 0 I 152 s cerAty1.NW_012004056v1 536148 3 + 16847902 aat i cerAty1.NW_012004056v1 C 0 I 1 s manLeu1.NW_012102020v1 650958 3 - 1977891 aat i manLeu1.NW_012102020v1 C 0 I 73 s calJac3.chr17 978230 3 - 74750902 AAT i calJac3.chr17 I 1 I 1 s saiBol1.JH378146 497279 3 + 17725628 aaa i saiBol1.JH378146 I 1 I 1 s cebCap1.NW_016107444v1 470302 3 - 6778120 aat i cebCap1.NW_016107444v1 I 1 I 1 s otoGar3.GL873829 471452 3 - 608964 aat i otoGar3.GL873829 C 0 I 9 s canFam3.chr33 29107512 3 + 31377067 AAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942679 3 + 6579706 aat i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M e chlSab2.chr15 466934 237 - 91754291 I a score=1911.000000 s hg38.chr3_KI270779v1_alt 184428 1 + 205312 t s panTro5.chr3 200171337 1 + 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128096 1 + 190779 t i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18657 1 - 189199 t i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932938 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29107515 1 + 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942682 1 + 6579706 t i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 471455 9 - 608964 I e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e cebCap1.NW_016107444v1 470305 1 - 6778120 I e macNem1.NW_012014355v1 603866 152 + 19675229 I e calJac3.chr17 978233 1 - 74750902 I e saiBol1.JH378146 497282 1 + 17725628 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e manLeu1.NW_012102020v1 650961 73 - 1977891 I e chlSab2.chr15 466934 237 - 91754291 I e cerAty1.NW_012004056v1 536151 1 + 16847902 I e macFas5.chr2 117554 1 + 192460366 I e rheMac8.chr2 202512013 125 + 204787373 I a score=15379.000000 s hg38.chr3_KI270779v1_alt 184429 4 + 205312 ------------aaca s panTro5.chr3 200171338 4 + 202621043 ------------aaCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128097 4 + 190779 ------------aaCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18658 4 - 189199 ------------aaca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932939 4 + 123690457 ------------aacg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 117555 4 + 192460366 ------------aatg i macFas5.chr2 I 1 C 0 s cerAty1.NW_012004056v1 536152 4 + 16847902 ------------aatg i cerAty1.NW_012004056v1 I 1 I 84 s chlSab2.chr15 467171 4 - 91754291 ------------aacg i chlSab2.chr15 I 237 C 0 s manLeu1.NW_012102020v1 651034 4 - 1977891 ------------aatg i manLeu1.NW_012102020v1 I 73 C 0 s calJac3.chr17 978234 4 - 74750902 ------------CATG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 497283 4 + 17725628 ------------aatg i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 470306 4 - 6778120 ------------agtG i cebCap1.NW_016107444v1 I 1 C 0 s otoGar3.GL873829 471464 4 - 608964 ------------AATA i otoGar3.GL873829 I 9 I 1 s canFam3.chr33 29107516 4 + 31377067 ------------AACA i canFam3.chr33 C 0 I 36 s dasNov3.JH569502 3942683 16 + 6579706 aaGACAGCTATGAATA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e macNem1.NW_012014355v1 603866 152 + 19675229 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e rheMac8.chr2 202512013 125 + 204787373 I a score=18325.000000 s hg38.chr3_KI270779v1_alt 184433 3 + 205312 aat s panTro5.chr3 200171342 3 + 202621043 aat i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128101 3 + 190779 aat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18662 3 - 189199 aat i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932943 3 + 123690457 aat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512138 3 + 204787373 aat i rheMac8.chr2 I 125 C 0 s macFas5.chr2 117559 3 + 192460366 aat i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 536240 3 + 16847902 aat i cerAty1.NW_012004056v1 I 84 C 0 s chlSab2.chr15 467175 3 - 91754291 aat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651038 3 - 1977891 aat i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 978238 3 - 74750902 AGT i calJac3.chr17 C 0 I 4 s saiBol1.JH378146 497287 3 + 17725628 agt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 470310 3 - 6778120 AGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 471469 2 - 608964 AG- i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29107556 3 + 31377067 aat i canFam3.chr33 I 36 C 0 s dasNov3.JH569502 3942699 3 + 6579706 AGT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e macNem1.NW_012014355v1 603866 152 + 19675229 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=3095054.000000 s hg38.chr3_KI270779v1_alt 184436 362 + 205312 GAATGAATGAATG------------GCTGTCTCAGCAGGGTGTGTGAATGCTTCTGTTCTTCCCTCCGTCGGTGGGCTGGGCTGGTTTGGAGATTGCCG--AAAGGCTGTGTGCTGCAGTg------------------agtcaggagacctgggttctagtcccagctgc--ctcacttatgggttctatgatcttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgcattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCCACTGGACTTTTGGAACCTAAAC-----TGCAACCT-GGGCGGGGC s panTro5.chr3 200171345 374 + 202621043 gaatgaatgaatgaatgaatgaGTGGCTGTCTCAGCAGGGCGTGTGAATGCTTCTGTTCTTCCCTCCATCGGTGGGTTGGGCTGGTTTGGAGATTGCCG--AAAGGCTGTGTGCTGCAGTg------------------agtcaggagacctgggttctagtcccagctgc--ctcacttatgggttctatgatcttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgcattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCCACTGGACTTTTGGAACCTAAAC-----TGCAACCT-GGGTGGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128104 374 + 190779 gaatgaatgaatgaatgaatgaatgGCTGTCTCAGCAGGGCGTGTGAATGCTTCTGTTCTTCCCTCCATCGGTGGGCTGGGCTGGTTTGGAGATTGCTG--AAAGGCTGTGTGCTGCAGTg------------------agtcaggagacctgggttctagtcccagctgc--ctcacttatgggttctatgatcttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgcattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCCACTGGACTTTTGGAACCTAAAC-----TGCAACCT-GGGTGGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 18665 370 - 189199 gaatgaatgaatgaatgaatg----GCTGTCTCAGCAGGGTGTGTGAATGCTTCTGTTCTTCCCTCCGTCGGTGAGCTGGGCTGGTTTGGAGATTGCCG--AAAGGCTGTGTGCTGCAGTg------------------agtcaggagacctgggttctagtcccagctgc--ctcacttatgggttctatgatcttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgcattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCCACTGGACTTTTGGAACCTAAAC-----TGCAACCT-AGGCGGGGC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120932946 374 + 123690457 gaatgaataaatgaatgaatgaatgGCTGTCTCAGCAGGGTGTGTGAATGCTTCTGTTCTTCCCTCCATCGGTGGGCTGGGCTGGTTTGGAGATTGCCA--AAAGGTTGTGTGCTGCAGTg------------------agtcaggagacctgggttctagtcccagctgc--ctcacttatgggttctatgaccttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgtattcgtcttcgtgtccagagcagctggcatgagcagaaattctgcaagtg-AATGAACAAC--------TCCAAAGTCTAGGCTGTTTATTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCTAAAC-----TGCAACCT-GGGCGGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512141 363 + 204787373 gaatgaatgaatg------------GCTGTCTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGATTGCTG--ACAGGCTCCGTGCTGCAGTg------------------aggcaggagacctgggatctagtcccagctgc--ctcacttacgggttctatgaccttaaacgagtcacttcacttagagagctttgaaaagcaggaac----cgtgaccgattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCTGGGTGGGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117562 362 + 192460366 gaatgaatgaatg------------GCTGTCTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGATTGCTG--ACAGGCTCCGTGCTGCAGTg------------------aggcaggagacctgggatctagtcccagctgc--ctcacttacgggttctatgaccttaaacgagtcacttcacttagagagctttgaaaagcaggaac----cgtgatggattcatcttcctgtccagagctgctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCT-GGTGGGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604018 361 + 19675229 gaatgaatgaatg------------GCTGTCTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGATTGCTG--AAAGGCTCCGTGCTacagtg------------------aggcaggagacctgggatctagtcccagctgc--ctcacttacgggttctatgaccttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacggattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAAT-CACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCT-GGTGGGGGC i macNem1.NW_012014355v1 I 152 C 0 s cerAty1.NW_012004056v1 536243 359 + 16847902 gaatgaatgaatg------------GCTGTCTCAGCAGCCTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGA-TGCTg--aaaggctccgtgctgcagtg------------------aggcaagagacctgggatctagtcccagctgcctctcacttacggactctatgaccttaaacaagtcacttaactt----agctttgaaaagcaggaac----cgtgacggattcatcttcctgtccagagctgctggcatgagtagAAATTCTGCAAGCG-AATGAACAAC--------TCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCT-GGTGGGGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 467178 362 - 91754291 gaatgaatgaatg------------GCTGTCTCCGCAGTGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGA-TGCTG--AAAGGCTCCGTGCTGCAGTg------------------aggcaggagacctgggatctagtcccagctgc--ctcacttacgggttctatgaccttaaatgagtcacttcacttagagagctttgaaaagcaggaac----cgtgacggattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAGAATCCACTGGCAATTGGACTTTTGGAACCCAAAC-----TGCAACCTGGGTGGGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651041 357 - 1977891 gaatgaatgaatg------------GCTGTCTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGA-TGCTg--aaaggctccgtgctgcagtg------------------aggcaagagacctgggatctagtcccagctgc--ctcacttacggactctatgaccttaaacaagtcacttaactt----agctttgaaaagcaggaac----cgtgacggattcatcttcctgtccagagctgctggcatgagtagaaattctgcaagtg-AATGAACAAC--------TCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCT-GGTGGGGGC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 978245 366 - 74750902 GAATGAATGAATG------------ACTGTCTCAGCAGGGTGTGTGAGTGCTTCTGTTCTTCCCTCCACTGGTGGGCTGGGCTGGTTTGGAGATTGCTG--GAAGGTTGTgtgctgcactg------------------agtcaggagacctggattctagtcccagctgc--ctcacttatgggtcctatgaccttaaacaagtcccttaacttagagagctttgaaaagcaggaac----catgacttagtcatgttcgtgtgcagagcagctggcatgagtagAAATTCTGCAAGCA-AATGAATAAC--------TCTAAAGTCTAGGCTCTTTCTTGTTCCAAATTCCCCCG-AACCCACTGGCAACTGGACTCTTGGAACCCAAACTGCGGTGCAACCT-GGGCGGGGT i calJac3.chr17 I 4 I 3 s saiBol1.JH378146 497290 348 + 17725628 gaatgaatgaatg------------aCTGTCTCAGCAGGGTGTGTGAGTGCTTCTGTTCTTCCTTCCATTGGTGGGCCCGgc-agtttgaagatggcta--cagg---------------g------------------agtcaggaga-ctggattctagtcccggctgc--ctcactgatgggttctatgaccttaaacaagtcacttaacttagagagctttgaaaagcagggac----cttgtcttagtcatcttcgtgtccagagcagctggcatgagtagacattctgcaagtg-AACGCATAAC--------TCTAAAGTCTAGGCTCTTTCTTGTTCCAAATTCCCCCA-AACCCACTGGCAACTGGACT-TTGGAACCCAAACTGCGGTGCGACCT-GGGCAGGGT i saiBol1.JH378146 C 0 I 4 s cebCap1.NW_016107444v1 470313 350 - 6778120 GAGTGAATGAATG------------ACTGTCTCAGCAGGGTGTGTGAGTGCTTCTGTTCTTCCCTCCATTGGTGGGCCGGGCTGGTTTGCAGATTGCTG--TAGT---------------g------------------aatcaggagacctggattctagtcccagctgc--ctcacttacgggttctatgaccttaagcaagtcacttaacttagagagctttgaaaagcagggac----cgcgactcagtcatcttcgtgtccagagcagctggcGTGAGTGGAAATTCTG-AAGTG-AGTGAATAAC--------TCTAAAGTCTAGGCTCTTTCTTGTTCCAAATTCCCCCA-AACCCACTGGCAACTGGACTTTTGGAACCCAAACTGCGGTGCAACCT-GGGCAGGGT i cebCap1.NW_016107444v1 C 0 I 69 s otoGar3.GL873829 471471 373 - 608964 GAATGATTGAATG------------ACTATCTCAGCAGGGTTTGTGGG-GCTCCTCTT----CCATCATTGATGGGCTGGGCTGGTTTGGAAGTTTGTG--AAAGGTTGTGTCTGGCCGTGGGAACTCAGCTAACGCAAagtcaggagacatggcttccagacctagctgc--tccacttatgggtaatgtgaccttaaacaaatcacttaga-cagagagctttggaaggcaggaag----tgtgactcaatcatcttagcatccagagcacctggcatgggtagaagttcTGCAAGGG-AATGAATAAC--------TCTAAAGCCTGAGACCTTTCTTATTCTGAATTTCTATA-AACCTGGCATCAACTGGACTTCAGGAATGCAAAC-----CATAATGGCAGTTGGGG- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29107559 346 + 31377067 ggatggatgaatg------------aatATCTCAACAGGGT-TGCAAGCGCTTCTATTCCTCC--TCATTGATGGGCTGTGCTGGTATG--------TA--AACAGTTTtgtaatgtggtgcaaacccagtaaatgaggagtcaggaaatttggattctagtcccagttgc--cctacttactggccgtgtgacctt-----------------taaaaagctttgg-aggcaggaacgacacatgacttattcatctttgtgtctagaacgtttggcatgagtagaagttcaacaagtg-gatgaacaac--------tgCAAAATCT-------TTCCTACCCTGAGGTCCCCAA-AGCCCATTGCCAACAGGACTTTTGGGACTCAAAC-----TGCTATTTTAGTCGGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3942702 328 + 6579706 GAAAGAATGAATG------------AATATCTCACCAGGGGCTGTGAGTGCTTCTGTTCCTCTCGTCATTGATGCACTGGGCTGGTTTGGGGTTTGTTGTAAAAGATTGTGTGCTAGAGTGGAA---------------AAGTAGTGAACAAGGAGTCGGG----AGAAAA---------------------------------------------GAgagctttggaagacaggaac----catgactcattcatcttagtatccagagtacctggaacaagtaggggctcagcaagtgaaatgaataaTTTCACTTGTCCAATGTCCAAGCGCTTTCCTATTCTCAAATCCCCAA-AGCTCACTGTCACCTGTACTTTTGGAATCCAAAC-----CTCAATGT-ACGTGGGGG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=-1080.000000 s hg38.chr3_KI270779v1_alt 184798 2 + 205312 GG s panTro5.chr3 200171719 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128478 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19035 2 - 189199 GG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933320 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512504 2 + 204787373 GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 117924 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604379 2 + 19675229 AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536602 2 + 16847902 GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 467540 1 - 91754291 G- i chlSab2.chr15 C 0 I 49 s manLeu1.NW_012102020v1 651398 1 - 1977891 G- i manLeu1.NW_012102020v1 C 0 I 1 s calJac3.chr17 978614 1 - 74750902 -G i calJac3.chr17 I 3 I 1 s saiBol1.JH378146 497642 1 + 17725628 -G i saiBol1.JH378146 I 4 I 1 s otoGar3.GL873829 471844 1 - 608964 -G i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29107905 2 + 31377067 AG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3943030 2 + 6579706 AG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e cebCap1.NW_016107444v1 470663 69 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=227713.000000 s hg38.chr3_KI270779v1_alt 184800 53 + 205312 CATCTCTACAGAGAGTCGATGTCTGTCCTCTGTGGTCCCTAA--ACACATACACG-- s panTro5.chr3 200171721 53 + 202621043 CATCTCTACAGAGAGTCGATGTCTGTCCTCTGTGGTCCCTAA--ACACACATACG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128480 53 + 190779 CATCTCTACAGAGAGTCGACGTCTGTCCTCTGTGGTCCCTAA--ACACACACACG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19037 55 - 189199 CATCTCTACAGAGAGTCGATGTCTGTCCTCTGTGGTCCCTAAACACACACACACG-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933322 51 + 123690457 CATCTCTACAGAGAGTCGATGTCCG----CTGCGGTCCCTAAACACACACACACG-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512506 46 + 204787373 --TATCCACAGAGAGTCCATGTTG-----CTGCGGTTCCTAA--ACACGCACACG-- i rheMac8.chr2 C 0 I 2 s macFas5.chr2 117926 46 + 192460366 --TATCCACAGAGAGTCCATGTTG-----CTGCGGTTCCTAA--ACACGCACACG-- i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 604381 46 + 19675229 --TATCCACAGAGAGTCCATGTTG-----CTGCGGTTCCTAA--ACACGCACACG-- i macNem1.NW_012014355v1 C 0 I 2 s cerAty1.NW_012004056v1 536604 46 + 16847902 --TATCCACAGAGAGTCCATGTTG-----CTGCGGTTCCTAA--ACACGCACACG-- i cerAty1.NW_012004056v1 C 0 I 2 s manLeu1.NW_012102020v1 651400 46 - 1977891 --TATCCACAGAGAGTCCATGTTG-----CTGCGGTTCCTAA--ACACGCACACG-- i manLeu1.NW_012102020v1 I 1 I 2 s calJac3.chr17 978616 48 - 74750902 TATCTACACAGAGAGGAGATGTCT-----CCTTGGTCCTTAA--ATGTGCACACG-- i calJac3.chr17 I 1 I 538 s saiBol1.JH378146 497644 48 + 17725628 TATCTATTCAGAGAGGAGATGTCT-----CTTTGGTCCTTAA--ATGTGCACACA-- i saiBol1.JH378146 I 1 I 1 s otoGar3.GL873829 471846 48 - 608964 TGTCTATTCCGAGAGTAGATATCT-----GTGCAGTCCTTAA--AAATGCACACG-- i otoGar3.GL873829 I 1 I 2 s canFam3.chr33 29107907 46 + 31377067 --CATATAGAGAGAGAGGATATCT-----ATGCAGACCTTAA--AAGCACACACT-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3943032 51 + 6579706 TGTCTGTATACAGGGCAGATGTCT-----GTGTGGTCCTTAAA-AAATGCATATGTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e cebCap1.NW_016107444v1 470663 69 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M e chlSab2.chr15 467541 49 - 91754291 I a score=193232.000000 s hg38.chr3_KI270779v1_alt 184853 31 + 205312 GGGAGTGGAGCTGCGGGCAACCCAGGCCAGT s panTro5.chr3 200171774 31 + 202621043 GGGAGTGGAGCTGCCGGCAACCCAGGCCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128533 31 + 190779 GGGAGTGGAGCTGCCGGCAACCCAGGCCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19092 31 - 189199 GGGAGTGGAGCTGCCGGCAACCCAGGCCAGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933373 31 + 123690457 GGGAGTGGAGCTGCCGGCAACACAGGCCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512554 30 + 204787373 GGGAGTGGAGCTGCCGGCAACACA-GCCAGT i rheMac8.chr2 I 2 C 0 s macFas5.chr2 117974 30 + 192460366 GGGAGTGGAGCTGCCGGCAACACA-GCCAGT i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 604429 30 + 19675229 GGGAGTGGAGCTGCCGGCAACACA-GCCAGT i macNem1.NW_012014355v1 I 2 C 0 s cerAty1.NW_012004056v1 536652 30 + 16847902 GGGAGTGGAGCTGCCGGCAACACA-GCCAGT i cerAty1.NW_012004056v1 I 2 C 0 s chlSab2.chr15 467590 30 - 91754291 GGGAGTGGAGCTGCCGGCAACACA-GCCAGT i chlSab2.chr15 I 49 C 0 s manLeu1.NW_012102020v1 651448 30 - 1977891 GGGAGTGGAGCTGCCGGCAACACA-GCCAGT i manLeu1.NW_012102020v1 I 2 C 0 s calJac3.chr17 979202 31 - 74750902 GGGGACGGAGCTGCCTGCAACACAGGCCAGT i calJac3.chr17 I 538 C 0 s saiBol1.JH378146 497693 31 + 17725628 GGGGCTGGAGCTGCCTACAACACGGGCCAGT i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 471896 12 - 608964 GAGAATGAAGCT------------------- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 29107953 15 + 31377067 ----------------GGAACGTAAGCCAGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3943083 30 + 6579706 AAGAACAGAGTTTCCTGCAACACG-GCCAGT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e cebCap1.NW_016107444v1 470663 69 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=803598.000000 s hg38.chr3_KI270779v1_alt 184884 111 + 205312 GCCCTT--------CCTCCAAGCAGGGCCGCCATTGCA-A-GGCCTCACGTGCA-ACACAAATGCCCAGTTCCTGAGACTTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACC s panTro5.chr3 200171805 111 + 202621043 GCCCTT--------CCTCCAAGCAGGGCCGCCATTGCA-A-GGCCTCATGTGCA-ACACAAATGCCCAGTTCCTGAGACTTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128564 111 + 190779 GCCCTT--------CCTCCAAGCAGGGCCGCCATTGCA-A-GGCCTCATGTGCA-ACACAAATGCCCAGTTCCTGAGACTTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19123 111 - 189199 GCCCTT--------CCTCCAAGCAGGGCCTCCATTGCA-A-GGCCTCACGTGCA-ACACAAATGCCCAGTTCCTGAGACTTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933404 111 + 123690457 GCCCCT--------CCTCCGAGCAGGGCCACCGTTGCA-G-GGCCTCATGTGCA-ACACAAATGCCCGTTTCCTGAGGCCTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512584 119 + 204787373 GCCCTTCCTCCTGTCCTCCCAGCAGGCGTGCCACTGCA-G-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTTAAGGAGAAGGGCGAAAAGGCATTTCAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118004 119 + 192460366 GCCCTTCCTCCTGTCCTCCCAGCAGGCGTGCCACTGCA-G-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604459 119 + 19675229 GCCCTTCCTCCTGTCCTCCCAGCAGGGGTGCCACTGCA-G-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCCAGGAGGAGGGCGAAAAGGCATTTCAACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536682 119 + 16847902 GCCCTTCCTCCTGCCCTCCCAGCAGGCGTGCCACTGCA-G-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 467620 119 - 91754291 GCCCTTCCTCCTGTCCTCCCAGCAGGGCTGCCACTGCA-G-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651478 119 - 1977891 GCCCTTCCTCCTGTCCTCCCAGCAGGCGTGCCACTGCA-G-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979233 110 - 74750902 GCCCTT--------CCTCTGAGCAGGGCTGCCGCGGCA-G-GGCCTCACGTACA-ACACAAATGCCT-GTTCCTGAGGCCTCTTCAGAGTCTCAAGGGAAGGGGTGGAAAAGTATTTAAACC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 497724 110 + 17725628 GCCCTT--------CCTCTGAGCAGGGCTGCCGTGGCA-G-GGCCTCGTGTACA-ACACAAATGCCC-GTTCCTGAGGCCTCTTCAGAGTCTCACGGAAAAGGGTGAAAAAGTATTTAAACC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 470732 110 - 6778120 GCCCTT--------CCTCTGAGCAGGGCTGCCATGGCA-G-CGCCTCATGTACA-AAACAAATGCCC-ATTCCTGAGGCCTCTTCAGAGTCTCAAGGAAAAGGGTGAAAAAGTACTTAAACC i cebCap1.NW_016107444v1 I 69 C 0 s otoGar3.GL873829 471908 12 - 608964 ----------------TCC-------------------------------TGTA-ACACA-------------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29107968 109 + 31377067 GCCCTC--------TGTTTGAGCAGGGCCACGATTGTA-GAGGCCTCATGCACATGCACAGACCCCCAGTTCCCGGGGCCTCTTCAGAGTCTCAAGGAAGATGCC----AAGCATCTGGACC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3943113 105 + 6579706 GCCCTC--------CAGCTGAGTGCAGCTGCCATCGTGCA-GGCCTCACGTGCA----TAGACACCCAGTTCTTGGGCCCTTTTCAGAGTTGCAAGGAAAATGATGA----TTATTTAAACC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=85101.000000 s hg38.chr3_KI270779v1_alt 184995 10 + 205312 TCTATGAAGT s panTro5.chr3 200171916 10 + 202621043 TCTATGAAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128675 10 + 190779 TCTATGAAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19234 10 - 189199 TCTATGAAGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933515 10 + 123690457 TCTATGAAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512703 10 + 204787373 TCTATGAAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118123 10 + 192460366 TCTATGAAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604578 10 + 19675229 TCTATGAAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536801 10 + 16847902 TCTATGAAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 467739 10 - 91754291 TCTATGAAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651597 10 - 1977891 TCTATGAAGT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979343 10 - 74750902 TCTATGGAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 497834 10 + 17725628 TCTGTGAAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 470842 10 - 6778120 TCTGTGAAGT i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29108077 10 + 31377067 CCTACAAAGT i canFam3.chr33 C 0 I 312 e otoGar3.GL873829 471920 0 - 608964 C e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 3943218 0 + 6579706 C e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=8281.000000 s hg38.chr3_KI270779v1_alt 185005 1 + 205312 A s panTro5.chr3 200171926 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128685 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19244 1 - 189199 A i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933525 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512713 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118133 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604588 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536811 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 467749 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651607 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979353 1 - 74750902 A i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 497844 1 + 17725628 A i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 470852 1 - 6778120 A i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 471920 0 - 608964 C e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 3943218 0 + 6579706 C e canFam3.chr33 29108087 312 + 31377067 I e aotNan1.NW_018507959v1 29661 0 - 3732694 C e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=2315453.000000 s hg38.chr3_KI270779v1_alt 185006 297 + 205312 Gggccaggcacagtagctcacgcctataatcccagcactttgggagccgaggcgagcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaacattagcc-gctgtggtgttgggcgtctataatcccagctactcgggaggctgaggcaggagaatctcttgaacccgggaggcagaggctgcactgagctgagaccacgccactgcactgcagcctgggggacagagagaaactctgtctcaaaaaacaaacaaaca s panTro5.chr3 200171927 297 + 202621043 Gggccaggcacagtagctcacgtctataatcccagcactttgggagccgaggcgagcggctcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaacattagct-gctgtggtgttgggcgtctgtaatcccagctactcgggaggctgtggcaggagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcacaccactgcactgcagcctgggggacagagagaaactctgtctcaaaaaacaaacaaaca i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128686 297 + 190779 Gggccaggcacagtagctcacgtctataatcccagcactttgggagccgaggcgagcggctcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaacattagct-gctgtggtgttgggcgtctgtaatcccagctactcgggaggctgaggcaggagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcacaccactgcactgcagcctgggggacagagagaaactctgtctcaaaaaacaaacaaaca i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19245 296 - 189199 Gggccaggcacagtagctcacgcctatcatcccagcactttgggagccgaggcgagtggatcacctgaggtcaagagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaacattagcc-gctgtggtgttgggcgtctgtaatcccagctactcgggaggctgaggcatgagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcgcgccactgcactgcagcctgggggacagagagaaactctgtctc-aaaaacaaacaaaca i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933526 295 + 123690457 Gggccgggcgcagtagctcacgcctataatcccagcactttgggagccgaggcaagcgaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaagccccatctctactaaaaatacaaacattagcc-gctgtggtggcgtgcgtctgcaatcccagctactcgggaggctgaggcaggagaatctcttgaatccgggaggcagaggctgcagtgagctgatatcgcgccactgcactccagcctggata--agagagaaactctgtctcaaaaaacaaacaaaca i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202512714 293 + 204787373 Gggccgggtgcagtggctcacacctgtaatcccagcactttgggagctgaggcgggtagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggtgggcgcctgcaatcccagctactcgggagtctgaggcaggagaatctcttgaacccgggaggtggaggctgcagtgagctgagatcacaccattgcactccagcctgggtgacagagtgagactctgtctcaaa----aaacaaaca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118134 293 + 192460366 Gggccgggtgcagtggctcacacctgtaatcccagcactttgggagctgaggcgggtagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggtgggcgcctgcaatcccagctactcgggagtctgaggcaggagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcacaccattgcactccagcctgggtgacagagtgagactctgtctcaaa----aaacaaaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604589 293 + 19675229 Gggccgggtgcagtggctcacacctgtaatcccagcactttgggagctgaggcgggtagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggtgggcgcctgcaatcccagctactcgggagtctgaggcaggagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcacaccacttcactccagcctgggtgacagagtgagactctgtctcaaa----aaacaaaca i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 536812 289 + 16847902 Gggccgggcgcagtggctcacacctgtaatcccagcactttgggagccgaggcgggtagatcacctgaggtcaggagttcgagaccagcctgggcaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggcgggcgcctgcaatcccagctattcaggagtctgaggcaggagaatctcttgaacccgggaggcagaggctgcagtgagctgagattacaccacttcactccagcctgggtgacagagcgagactctgtctcaaa--------aaaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 467750 293 - 91754291 Gggccaggcgcagtggctcacacctgtaatcccagcactttgggagccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatgcaaaaattaact-gctgtggtggtgggcgcctgcaatcccagctactcaggagtctgaggcgggagaatctcttgaacccgggaggcggaggttgcagtgagctgagatcacaccacttcactccagcctgggtgacagagcgagactctgtctcaaa----aaacaaaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651608 293 - 1977891 Gggccgggcacagtggctcacacctgtaatcccagcactttgggagctgaggtgggtggatcacctgaggtcaggagttcgagaccagcctgggcaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggtgggcgcctgcaatcccagctactcaggagtctgaggcaggagaatctcttaaacccgggaggcagaggctgcagtgagctgagatcgcaccacttcactccagcctgggtgacagagcgagactctgtctcaaa----aaacaaaca i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979354 298 - 74750902 GggccggatgccatggcccacgcctgtcattccagctctctgggaactgaggtgggcagatcacttgaggccaggagtttgagaccagcctgaccaacatggtgaaaccccatctctaccaacaatacaaaaattagccaggcatggtggtgggtgcctgtaaccccagctactcgggagaccgaggcaggagcgtcacgtgaacccgggaggcggaggctgcagtgagccgagatcacgccactgtactccagcctgggcaacagagtgagactctgtctcaataaacaaTCACACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 497845 298 + 17725628 GGCccggatgccatgattcacgcctgtaatcccagcactttgggggctgaggtgggcagatcacttgaggccaggagtttgagaccagcctgaccaacatggtaaaaccccatctctaccaaaaatacaaaaattagccgggcgtggtggcgggtgcctgtaaccccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagaggctgcagtgagctgagatcatgctactgtactccagcctgggtgacagagtgagactgtgactcaaaaaacaaaCACACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 470853 296 - 6778120 Gggccagatgccatggctcacgcctgtaatcccagcactttgggagctgaggtgggcagatcacttgaggccaggagtttgagaccagcctgaccaacatggtaaaaccccatccctaccaaaaatacaaaagtcagccgggcgtggtggcgggcgcctgtaaccccagctgcttggcaggctgaggcaggagaatcacttgaacccgggaggcagaagctgcagtgagctgagatcatgctactgtactccagcctgggcaacagaaggagac--tgtctcaaaaagcaaaCGaaca i cebCap1.NW_016107444v1 C 0 I 414 s aotNan1.NW_018507959v1 29661 297 - 3732694 Gggccaggtgcagtggctcatgcctggaatcccagcactttgggagctgaggtgggcagatcacttgaggtcaggagttcgagagcagcctggccaacatggcgaaaccccacctctactaaaaataaaaaaattagccgggcgtggtggtgggtgcctgtaaccccagctactcgggaggctgaggcaggagcatcacttgaaccctggaggcggaggctgcagtgagctgagatcgtgctactgtactccagcct-ggcaacagagtgaggctgagtctcaaaaaacaaacaaaCa i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 471920 102 - 608964 -GGCCAG------------------------CCAGTACCC--------------------------------------TCCAGATGAACAGGGCCACCACGGTGGAGCCTC-----------------AAGCACAAGCT-------------------CAGAGGCCCAGCTCCTGGGG-----------------CCTCCT------------CAGAGTCT-----------------------------------TAGGGGAAA--------------------------------- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 3943218 0 + 6579706 C e canFam3.chr33 29108087 312 + 31377067 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=56090.000000 s hg38.chr3_KI270779v1_alt 185303 13 + 205312 aacccaaaaaaCc s panTro5.chr3 200172224 13 + 202621043 aacccaaaaaaCc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128983 13 + 190779 aacccaaaaaaCc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19541 12 - 189199 aaccc-aaaaaCc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933821 13 + 123690457 aacccaaaaaaCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513007 13 + 204787373 aaTCCATAAAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118427 13 + 192460366 aaTCCATAAAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604882 13 + 19675229 aaTCCATAAAACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537101 13 + 16847902 aatccataaaacc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468043 12 - 91754291 aatccataaaac- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651901 13 - 1977891 aaTCCATAAAACC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979652 9 - 74750902 ----TACAAACCC i calJac3.chr17 C 0 I 10 s saiBol1.JH378146 498143 9 + 17725628 ----CACAAACCC i saiBol1.JH378146 C 0 I 8 s aotNan1.NW_018507959v1 29958 13 - 3732694 cacacacaaaccc i aotNan1.NW_018507959v1 C 0 I 37 e otoGar3.GL873829 472022 0 - 608964 C e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 3943218 0 + 6579706 C e canFam3.chr33 29108087 312 + 31377067 I e cebCap1.NW_016107444v1 471149 414 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=38795.000000 s hg38.chr3_KI270779v1_alt 185316 43 + 205312 aacaacaacagcaacaataaaaaaa-cCGTCTATGAAGAAATCG s panTro5.chr3 200172237 44 + 202621043 agcaacaacagcaacaacaaaaaaaacCGTCTATGAAGAAATCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 128996 44 + 190779 agcaacaacagcaacaacaaaaaaaacCGTCTATGAAGAAATCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19553 43 - 189199 aacaacaacagcaacgacaaaaaaa-cCGTCTATGAAGAAATCG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933834 32 + 123690457 AACAACACC-----------AAAAA-CCGTCTATGAAGAAACTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513020 18 + 204787373 AACAACAAC-----------AAAAA---------------ACCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118440 18 + 192460366 AACAACAAC-----------AAAAA---------------ACCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604895 18 + 19675229 AACAACAAC-----------AAAAA---------------ACCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537114 18 + 16847902 aacaacaac-----------aaaaa---------------ACCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468055 16 - 91754291 --caacaac-----------aaaaa---------------aCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651914 18 - 1977891 AACAACAAC-----------AAAAA---------------ACCG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979671 19 - 74750902 AGCAACAAC-----------AACTA--------------AACCC i calJac3.chr17 I 10 C 0 s saiBol1.JH378146 498160 19 + 17725628 AACAACAAC-----------AACAA--------------AACCC i saiBol1.JH378146 I 8 C 0 s otoGar3.GL873829 472022 17 - 608964 ---------------------------TGTTGATTATTTAAACC i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e dasNov3.JH569502 3943218 0 + 6579706 C e canFam3.chr33 29108087 312 + 31377067 I e aotNan1.NW_018507959v1 29971 37 - 3732694 I e cebCap1.NW_016107444v1 471149 414 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=21746.000000 s hg38.chr3_KI270779v1_alt 185359 4 + 205312 TCGA s panTro5.chr3 200172281 4 + 202621043 TCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129040 4 + 190779 TCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19596 4 - 189199 TCTA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933866 4 + 123690457 TCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513038 4 + 204787373 TCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118458 4 + 192460366 TCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604913 4 + 19675229 TCTA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537132 4 + 16847902 TCTA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468071 4 - 91754291 TCTA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651932 4 - 1977891 TCTA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979690 4 - 74750902 CTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498179 4 + 17725628 TCTG i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 472039 4 - 608964 TCTA i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3943218 4 + 6579706 TTGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 29108087 312 + 31377067 I e aotNan1.NW_018507959v1 29971 37 - 3732694 I e cebCap1.NW_016107444v1 471149 414 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=15532.000000 s hg38.chr3_KI270779v1_alt 185363 4 + 205312 TGAG s panTro5.chr3 200172285 4 + 202621043 TGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129044 4 + 190779 TGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19600 4 - 189199 TGAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933870 4 + 123690457 TGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513042 4 + 204787373 TGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118462 4 + 192460366 TGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604917 4 + 19675229 TGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537136 4 + 16847902 TGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468075 4 - 91754291 TCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651936 4 - 1977891 TGAA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979694 3 - 74750902 TAA- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498183 3 + 17725628 TAA- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 472043 4 - 608964 TAAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467409 4 - 98207768 TGAG i mm10.chr16 I 2011 C 0 s dasNov3.JH569502 3943222 4 + 6579706 TAAA i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29108087 312 + 31377067 I e aotNan1.NW_018507959v1 29971 37 - 3732694 I e cebCap1.NW_016107444v1 471149 414 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=501091.000000 s hg38.chr3_KI270779v1_alt 185367 70 + 205312 GTGCCAACAGACTCAGTT-ATTTTGACT---------CAATTTCTCAGAACATG--------------CTGGGGC---------GGGAACTCAGCCTAGCAGT s panTro5.chr3 200172289 70 + 202621043 GTGCCAACAGACTCAGTT-ATTTTGACT---------CAATTTCTCAGAACATG--------------CTGGGGC---------ATGAACTCAGCCTAGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129048 70 + 190779 GTGCCAACAGACTCAGTT-ATTTTGACT---------CAATTTCTCAGAACATG--------------CTGGGGC---------ATGAACTCAGCCTAGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19604 70 - 189199 GTGCCAACAGGCTCAGTT-ATTTTGACT---------CAATTTCTCAGAATATG--------------CTGGGGC---------ATGAACTCAGCCTAGCAGA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933874 70 + 123690457 GTGCCAACAGACTCACTT-ATTTTGACT---------CAATTTCTCAGAACATG--------------CTGGGGC---------ATGAACTTAGCCTAGTAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513046 67 + 204787373 GTGCCAACAGATTCAGTT-ATTTTGACT---------CAATTTCTCAGAACACG--------------CTGGGGC---------ATGAACTCAGCCTAGT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118466 67 + 192460366 GTGCCAACAGATTCAGTT-ATTTTGACT---------CAATTTCTCAGAACACG--------------CTGGGGC---------ATGAACTCAGCCTAGT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604921 67 + 19675229 GTGCCAACAGATTCAGTT-ATTTTGACT---------CAATTTCTCAGAACACG--------------CTGGGGC---------ATGAACTCAGCCTAGT--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537140 67 + 16847902 GTGCCAACAGATTCAGTT-ATTTTGACT---------CAATTTCTCAGAACACG--------------CTGGGGC---------ATGAACTCAGCCTGGT--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468079 67 - 91754291 GTGCCAACAGATTCAGTT-ATTTTGACT---------CAATTTCTCAGAACACG--------------CTGGGGC---------ATGAACTCAGCCTAGT--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 651940 67 - 1977891 GTGCCAACAGATTCAGTT-ATTTTGACT---------CAATTTTTCAGAACACG--------------CTGGGGC---------ATGAACTCAGCCTGGT--- i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979697 64 - 74750902 GTGCCAACAGATTCAGTTCACTTTGAC-------------TTCCTCGGAACGTG--------------CTGGGGC---------GTGAGCTCAGCCTAAT--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498186 68 + 17725628 GTGCCAGCAGATCCAGTTCATTTTGACT---------CTATTTCTCGGAACACG--------------CTGGGGC---------ATGAGCTCAGCCTAAT--- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 30008 67 - 3732694 GTGCCAACAGACTCAGTTCATTTGGGCT---------CCGTTTCTCGGAACATG--------------CTGGGGC---------GTGAGCTCAGCCTGA---- i aotNan1.NW_018507959v1 I 37 C 0 s otoGar3.GL873829 472047 71 - 608964 GTGCCAACAAATTGAGTTCATTTCTACT---------CAGCTCCTCAGCATGTG--------------CCAGGGA---------ATGAACTCAGCTCAATAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467413 69 - 98207768 GTGCCGACAAATCACACT-CGTTTGGAG---------CAGCAACTGAGTAGACG--------------CTAGAGAA-----AGGATGAGCTGAGCCGA----- i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3943226 103 + 6579706 GGGCCAACAAATTCAGTTCATTTCAATTGTTCCTTGGCATCATCCCAAGCCCTGGAATCCAACGATGACTGGTGCCTCTCTGCAAGGAACCCAGTCCAGTGGA i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29108087 312 + 31377067 I e cebCap1.NW_016107444v1 471149 414 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=140956.000000 s hg38.chr3_KI270779v1_alt 185437 17 + 205312 AAGAAAGACGTATATTT s panTro5.chr3 200172359 17 + 202621043 AAGAAAGACATATATTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129118 17 + 190779 AAGAAAGACGTATATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19674 17 - 189199 AAGAAAGACGTATATTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933944 17 + 123690457 AAGAAAGATGTATATTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513113 16 + 204787373 -AGAAATATGTATATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118533 16 + 192460366 -AGAAATATGTATATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 604988 16 + 19675229 -AGAAATATGTATATTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537207 16 + 16847902 -AGAAATATGTATATTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468146 16 - 91754291 -AGAAATATGTATATTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652007 16 - 1977891 -AGAAATATGTATGTTT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979761 16 - 74750902 -AGAAGGATGTATGTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498254 16 + 17725628 -AGAAAGATGTATATTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 471563 17 - 6778120 AAGAAGGATGTATATTT i cebCap1.NW_016107444v1 I 414 C 0 s aotNan1.NW_018507959v1 30075 17 - 3732694 TAGAAAGATGTATATTT i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65467483 16 - 98207768 CAGAAAGACCCAT-CTT i mm10.chr16 I 1 C 0 s dasNov3.JH569502 3943329 17 + 6579706 AGGCAAAGTGTACATTC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 472118 0 - 608964 C e canFam3.chr33 29108087 312 + 31377067 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=1638945.000000 s hg38.chr3_KI270779v1_alt 185454 189 + 205312 AAGGTAAAAGGCT--GAAACTAGGGGGAGAGAGAGCCTATAAGGTC-TCTGTCCTGGCCTTCAGAGAAGTGGCTCTGTGAGCTACACGATGTGCATATTTTAAGCACTTAACAGCACCGTGAAATCAGAGAA--------AAGACACAGAGTAGCAAA-ACCACCCGTT-GAGCGTACAAAAGGCCAACCA---CTTCTTGTCCT s panTro5.chr3 200172376 188 + 202621043 AAGGTAAAAGGCT--GAAACTAGGGGGAGAGAGAGCCTATAAGGTC-TCTGTCCTGGCCTTCAGAGAAGTGGCTCTGTGAGCTACACGATGTGCATATTT-AAGCATTTAACAGCACCGTGAAATCAGAGAA--------AAGACACAGTGTAGCAAA-ACCACCCGTT-GAGCATACAAAAGGCCAACCA---CTTCTTGTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129135 188 + 190779 AAGGTAAAAGGCT--GAAACTAGGGGGAGAGAGAGCCTATAAGGTC-TCTGTCCTGGCCTTCAGAGAAGTGGCTCTGTGAGCTACACGATGTGCATATTT-AAGCATTTAACAGCACCGTGAAATCAGAGAA--------AAGACACAGTGTAGCAAA-ACCACCCGTT-GAGCATACAAAAGGCCAACCA---CTTCTTGTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19691 189 - 189199 AAGGTAAAAGGCT--GAAACTAGGGGGAGAGAGAGCCTATAAGGTC-TCTGTCCCGGCCTTCAGAGAAGTGGCTCTGTGAGCTACACGATGTGCATATTTTAAGCATTTAACAGCACCGTGAAATCAGAGAA--------AAGACACGGTGTAGCAAA-ACCACCCGTT-GAGCACACAAAAGGCCAACCA---CTTCTTGTCCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120933961 192 + 123690457 AAGGTAAAAAGTTGAGAAACTGGGGGGAGAGAGAGCCTATAGGGTC-TCTGTCCTGGCCTTCAGAGAAGTGGCTGTGTGAGCTACACGATGTGCATATTTTAAGCATTTAACAGCACGGCGAAATCAGAGAA--------AAGACACA--GTAGCAAA-ACCACCCGTT-GAGCATACAAAAGGCCAACCACTTCTTCTTGTCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513129 184 + 204787373 AAGGTAAAAGGTT--GAAACTAGGGGGAGAGAGAGCCTAAAAGGTC-CCTGTCCAGGCCTTCAGAGAA---GCTCTGGGAACTACATGATGTGCACATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACCCGCT-GAGCACACAGAGGTCCAGCCG---CTTCGTGTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118549 184 + 192460366 AAGGTAAAAGGTT--GAAACTAGGGGGAGAGAGAGCCTAAAAGGTC-CCTGTCCAGGCCTTCAGAGAA---GCTCTGGGAACTACATGATGTGCACATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACCCGCT-GAGCACACAGAGGTCCAGCCG---CTTCGTGTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605004 184 + 19675229 AAGGTAAAAGGTT--GAAACTAGGGGGAGAGAGAGCCTAAAAGGTC-CCTGTCCAGGCCTTCAGAGAA---GCTCTGGAAACTACATGATGTGCACATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACGCGCT-GAGCACACAGAGGTCCAGCCG---CTTCTTGTCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537223 184 + 16847902 AAGGTAAAAGGTT--GAAACTAGGGGGAGAGAGAGTCTAAAAGGTC-CCTGTCCAGGCCTTCAGAGAA---GCTCTGGGAACTACATGATATGCACATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAACAAA-ACCACCCGCT-GAGCACACAGAAGTCCAGCCA---CTTCGTGTCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468162 187 - 91754291 AAGGTAAAAGGTT--GAAACTGGGGGGAGAGAGAGCCTAAAAGGTC-CCTGTCCAGGCCTTCAGAGAAGTGGCTCTGGGAGCCACATGACGTGCATCTTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACGCGCT-GAGCACACAGAAGTCCAGCCG---CTTCGTGTCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652023 187 - 1977891 AAGATAAAAGGTT--GAAACTAGGGGGAGAGCGAGCCTAAAAGGTC-CCTGTCCAGGCCTTCAGAGAAGTGGCTCTGAGAGCTACATGATGTGCATATTTTCAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAACAAA-ACCACCCGCT-GAGCACACAGGAGTCCAGCCG---CTTCGTGTCCT i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979777 186 - 74750902 GAGGTAGAAGGTT--GAAACGAGGGGGAGAGACAGGCTGTCGGGTC-TCTGTCCTGGCCTTCAGAGAAGTGGCTCTGGGAGCCACACTGTGTGT--ATTTTAAGCACTTAACAGCACCATGATGCCGGAAAA--------CAGACGCA--GCGGCGAA-ACCACTCGTTTGAACATGTAAAAGGCCAGCCA---CTTCTTGTCCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498270 186 + 17725628 GAGGTAAAAGGTT--GAATCGAGAGGGAGGGTTAGGCTGTCGGGTC-TCC-TCCTGG-CTTCGGAGGAGTGACTCTGGGAGCTACACTGTGTGCAGATTTTAAGCATTTAACAGCACCGTGAAACCAGAAAA--------CAGATGCC--GTAGCAAA-ACCACCCATTTGAACATGTAACAGGCCAGCCA---CTCCTTGTCCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 471580 185 - 6778120 GAGGTAAAAGGTT--GAAACGAGGGGGAGACAGAGGCGGTCAGGTC-TCTGCGCCGG-CTTCAGAGGGG-GGCTCTGGGAGCCACACTGTGTGCATGTTTTCAGCATTTAAGAGCACCACGAAACCAG-AAA--------CAGACACA--GTAGCGAA-ACCACTCGTTCGAACGTGTAAAAGGCCAGCCG---CTTCTTGTCCT i cebCap1.NW_016107444v1 C 0 I 6 s aotNan1.NW_018507959v1 30092 182 - 3732694 GAGGTAAAG------GAAACCACGGGGAGAGATAGGCTGTCAGGTC-TCTGTCCCGGCCTTCAGGGAAGTGGCTCTGGGAGCTACACTGTGCGT--ATTTTAAGCACTTAACAGCACCATGAAACCAGAAAA--------CAGACACA--GTAGCAAA-ACCACTCATTTGAACATGTGAAAGGCCAGCCA---CTCCTTGTCCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 472118 177 - 608964 AAGGTAAAAGGGT--GAAACTAGGAGGACAGATGGCCCGTAGAGTC------------CATCTGGGAGGTTGCTCTGGGAGTTATGTTCAGTGCCTATTTGAAGCATTTAACAGCCCTGAGAACCCAGAGAA--------CACATACT--GTAGCAAA-ACTACTTGTTTGAGCACATGAAAGGCCAACTG---CCACTGGCCCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467499 196 - 98207768 GAGGGCAAAGGTT--GAAACTAGGAGGAGCCTGGGCCTACAGAGTG-TTAGTCCCAGTCTAGAGCGAAGAGGCCCCTGAGACTACTTTGCATGTCTTTGTGAGGTATTCAACC-CACCAAGAAACCAGAAAACAAAGTAGCAAACACA--GTAGCAAAGACCACTCCTTTGAGCATGGAAAAGGTCAACTA---CTTCTCAGCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29108399 183 + 31377067 aaaaaaaaaaaAA--AAAAAAAGGAGGAGAGACA-CCTCTAACGTCTTCAGTCTTGGCCTTCAAAGAAGTGGCCCCAAGAGCCACATTCTGGGCAGACCTGAAGCATTGAGGGGTGTCACAAAACCAGGGAA--------GAGACT-------GCACA-ACCACTTGCTGGAGCACATAAAAAGCCAACTG---CCTCTTGGCCT i canFam3.chr33 I 312 C 0 s dasNov3.JH569502 3943346 166 + 6579706 AAGGTGAAAGGCT--GGGGCTAGGAGGAGAG----------------------CTGGCCTTAAGAGAAGTGGCTCCACGAGCTACATTATGTGCCTATTTGAAGCCTTTGACAGTGTCAC-AAACGAGAGAA--------CAGACCCA--GTAGCAAA-ACCACTTGTTTGACCACATAAAACGCCAACGG---TTTTTCAGCCT i dasNov3.JH569502 C 0 C 0 e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=2745.000000 s hg38.chr3_KI270779v1_alt 185643 20 + 205312 CTCATTGCCTCTTGTCCTTA s panTro5.chr3 200172564 20 + 202621043 CTCATTGCCTCTTGTCCTTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129323 20 + 190779 CTCATTGCCTCTTGTCCTTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19880 20 - 189199 CTCATTGCCTCTTGTCCTTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934153 20 + 123690457 CTCATTGCCTCTTGTCCTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513313 6 + 204787373 CT--------------CTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118733 6 + 192460366 CT--------------CTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605188 6 + 19675229 CT--------------CTTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537407 6 + 16847902 CT--------------CTTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468349 6 - 91754291 CT--------------CTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652210 6 - 1977891 CT--------------CTTG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979963 6 - 74750902 --------------GCCTCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498456 6 + 17725628 --------------GTCTTG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 30274 6 - 3732694 --------------GTCTCG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 472295 6 - 608964 --------------TCCCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467695 6 - 98207768 --------------CTCCTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29108582 4 + 31377067 ----------------CCTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3943512 6 + 6579706 --------------CTCCTG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 471765 6 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=1134795.000000 s hg38.chr3_KI270779v1_alt 185663 127 + 205312 GCAATGAAGACACAAATCA-CTTGCGTGTCAAGCACT-GCCAGGCCAGCCTCTGCCAGGCCAGCCTCTGCCTCCACGGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGGAGCGGTGA s panTro5.chr3 200172584 112 + 202621043 GCAATGAAGACACAAATCA-CTTGCGTGTCAAGCACT-GCCAGGCCAGCCTCTGCC---------------TCCACGGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGGAGCGGTGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129343 112 + 190779 GCAATGAAGACACAAATCA-CTTGCGTGTCAAGCACT-GCCAGGCCAGCCTCTGCC---------------TCCACGGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGGAGCGGTGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 19900 126 - 189199 ACAATGAAGACACAAATCA-CTTGCGTGTCAAGCATT-GCCAGGCCAGCCTCTGCCAGGCCAGCCTCTGCCTCCACGGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCA-GGAGCGGTGA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934173 127 + 123690457 GCAATGAAGACACAAATCA-CTTGCGTGTCAAGCATT-GCCAGGCCAGCCTCTGCCAGGCCAGCCTCTGCCTCCATGGCCAAGCCCAGAAACCAAGGGCATGGGGGG----ACTCACAGGCAGGGAGCGGTGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513319 112 + 204787373 GCAATGAAGACACAAACCA-CTTGCGTGTCAAGCGTT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGTGTGGCGGG----ACTCACAGGCAGGGAGCGGTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118739 112 + 192460366 GCAATGAAGACACAAACCA-CTTGCGTGTCGAGCGTT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGTGTGGCGGG----ACTCACAGGCAGGGAGCGGTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605194 112 + 19675229 GCAATGAAGACACAAACCA-CTTGTGTGTCGAGCATT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCATGGCGGG----ACTCACAGGCAGGGAGCGGTGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537413 112 + 16847902 GCAATGAAGACACAAACCA-CTTGCGTGTCAAGCGTT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGGAGCGGTGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468355 112 - 91754291 GCAATGAAGACACAAACCA-TTTGCGTGTCAAGCGTT-GCCAGGCCAGCCTCTGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCGTGGTGGG----ACTCACAGGCAGGGAGCGGTGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652216 112 - 1977891 GCAATGAAGACACAAACCA-CTTGCGTGTCAAGCGTT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCATGGCGGG----ACTCACAGGCAGGGAGCGGTGA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 979969 105 - 74750902 GCAATGAAGA-------CA-CTTGCACACCAAACATT-GCCAGGCCAGCCTCTGTC---------------TCCGAAGCTGAGCCCAGAAACCAAGGGCGTGGAGGG----ACTGGCAGGCGGGGAGTGGTGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498462 111 + 17725628 GCAATGAAGACACAAATCA-CTCGCATGCCAAACGTT-GCCAGGCCAGGCTCTGTC---------------TCCATAGCTGAGCCCAG-AACCAAGGGCGTGGAGGG----GTTGACAGGCAGGGAGCAGTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 471771 111 - 6778120 GCAATGAAGACACAAATCA-CTCGCATGCCAAACATT-GCCAGGCCAGCCTCTGTC---------------TCCGTAGCTGAGCCCAA-AACCAAGGGCGTGGAGGG----ATGGGCAGGCAGGGCGCGGTGA i cebCap1.NW_016107444v1 I 6 I 51 s aotNan1.NW_018507959v1 30280 112 - 3732694 GCAATGAAGACACAGATCA-CTTGCATGCCAAGCATT-GCCAGGCCAGGCTCTGCC---------------TCCATAGCTGAGCCCAGAAACCAAGGGCGTGGACGG----ATTGACAGGCAGGGAGCGGTGA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 472301 112 - 608964 GCAATGAAAATACAAGTCA-CTTGCAGATCAAACACC-AGCAGGCCAGTCTCATCT---------------TCTGGAGCTGAGCTCAGAATCTAAGGGTGTGGAGTG----ACTGCCAGGCCAGGAACTGTAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467701 96 - 98207768 GCAACAAAGACACAAGCCA-CTTATTTGTTAAACAGTGGCTTGACCATCCTCCCTC------------------------------AGAGGTC-AGGGCATGGAGGAGACTGCCCAAAAGAAAGGACC----- i mm10.chr16 C 0 C 0 s canFam3.chr33 29108586 110 + 31377067 GTAATGAAGACA---ATCA-CTGGCACGTCAGACGCT-GCCGGGACAGCCTCGGCC---------------CCCAGGGCCACGGCCAGGAATCGAGGCTGGGGAGGGG---ATTTCTGGGCAAGGCCCCCCGA i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3943518 113 + 6579706 GCAACACATACACAAATCACCTCGCACATCTA-CCCT-GCCAAGCCAGCCTCTGCC---------------TCGGAAGCCAAGCGCAGAAACCAAGGGCGTGGTGGGG---ATTGCCAGTCAAGGAACCGTGA i dasNov3.JH569502 C 0 C 0 e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=274851.000000 s hg38.chr3_KI270779v1_alt 185790 49 + 205312 GGCAGAGCTGTCC-GCTGGAGCGAGCCCCTGCTCTAGG----GCCA-------TGGCCCTC s panTro5.chr3 200172696 49 + 202621043 GGCAGAGCTGTCC-GCTGGAGCGAGCCCCTGCTCTAGG----GCCA-------TGGCCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129455 49 + 190779 GGCAGAGCTGTCC-GCTGGAGCGAGCCCCTGCTCTAGG----GCCA-------TGGCCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20026 49 - 189199 GGCAGAGCTGTCC-GCTGGAGCGAGCCCCTGCTCCAGG----GCCA-------TGGCCCTC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934300 49 + 123690457 GACAGAGCCGTCC-GCTGGAGCGAGCCCCTGCTCTAGG----GCCA-------TGGCCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513431 52 + 204787373 GGCAGAGCCGTCT-GCTGGAGCGAG-CCCTGCTCTGGG----GCCACGAC---TGGCACTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118851 52 + 192460366 GGCAGAGCCGTCT-GCTGGAGTGAG-CCCTGCTCTCGG----GCCACGAC---TGGCACTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605306 52 + 19675229 GGCAGAGCCATCT-GCTGGAGCGAG-CCCTGCTCTCGG----GCCACGAC---TGGCACTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537525 52 + 16847902 GGCAGAGCCGTCT-GCTGGAGCGAG-CCCTGCTCTGGG----GCCACGAC---TGGCACTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468467 52 - 91754291 GGCAGAGCCGTCT-GCTGGAGCGAG-CCCTGCTCTCGG----GCCACGAC---TGGCACTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652328 52 - 1977891 GGCAGAGCCGTCT-GCTGGAGCGAG-CCCTGCTCTGGG----GCCACGAC---TGGCACTC i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980074 52 - 74750902 -AGTGTGCCATCA-GCCGCAGCGAGCCCCTGCTCTATG----GCCAAGAT---TGGCATTC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 498573 52 + 17725628 -AGTGTGCCCTCA-GCTGCAGCGAGCCCCTGCTCCGTG----GCCAAGAC---TGGCATTC i saiBol1.JH378146 C 0 I 1 s aotNan1.NW_018507959v1 30392 52 - 3732694 -AGCGTGCCATCA-GCTGCAGCCAGCTCCTGCTCTATG----GCCAAGAT---TGGCATTC i aotNan1.NW_018507959v1 C 0 I 1 s otoGar3.GL873829 472413 54 - 608964 TGCTGCACTGTTTGGCTCAATCATTTGTCTGCTTGATG----ACAGAGGT---TGGCATTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467797 51 - 98207768 TGCAGAAACAGCA-GTCAGAGTTTGGTCCTGC----GG----GCAGAGGTAGGGGGCCTT- i mm10.chr16 C 0 C 0 s canFam3.chr33 29108698 53 + 31377067 AGCAGTGCCCTCA-GCTCCAGCGGG----CGCTCCAGGTGATGGCAGAGC---CGGCCTTC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3943631 40 + 6579706 AGCAGTGATGTCA-GCTCAAGCAGA-GACTGCGCGATG----GCAG--------------- i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 471882 51 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=1734700.000000 s hg38.chr3_KI270779v1_alt 185839 191 + 205312 GGGGTCCGTTCATGCAGCAAGCCACATTCTGAATACACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CGGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGATATGAC-CCTGGGCCGACACAAG------TGCCATTCCGGGTTCAATCACCCTCCTTCCCCC-GTCTTCCCAGGCCTCTTTCTCAAA s panTro5.chr3 200172745 191 + 202621043 GGGGTCCGTTCATGCAACAAGCCACATTCTGAATACACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGAGATGAC-CCTGGGCCGACACAAG------TGCCATTCCGGGTTCAATCACCCTCCTTCCCCC-GTCTTCCCAGGCCTCTTTCTCAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129504 191 + 190779 GGGGTCCATTCATGCAACAAGCCACATTCTGAATACACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGAGATGAC-CCTGGGCCGACACAAG------TGCCATTCCGGGTTCAATCACCCTCCTTCCCCC-GTCTTCCCAGGCCTCTTTCTCAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20075 190 - 189199 GGGGCCCATTCATGCAATAAGCCACATTCTGAATACACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGC-TTTTAGAGGCACGAGGATCCTTAGATGAAGGGATATGAC-CCTGGGCCGACACAAG------TGCCATTCCGGGTTCAATCACCCTCCTTCCCCC-GTCTTCCCAGGCCTCTTTCTCAAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934349 197 + 123690457 AGGGTCCTTTCATGCAATAAGCCACATTCTGAATATACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGATATGAC-CCTGGGCCGACACAAGTGTTCATGCCATTCTGGGTTCCATCACCCTCCTTCCCCC-ATCTTCCCAGGCCTCTCTCTCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513483 197 + 204787373 GGGGTCCCTTCGTGCAATAAGCCATGTTCTGAATACACCACGCCAGCCCCTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTACATGAAAGGATGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTCCGTCACCCTCCTTCCCCC-TTCTTCCCAGGCCTCTCTCTCAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 118903 197 + 192460366 GGGGTCCCTTCGTGCAATAAGCCACGTTCTGAATACACCACACCAGCCCCTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTACATGAAAGGACGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTCCGTCACCCTCCTTCCCCC-TTCTTCCCAGGCCTCTCTCTCAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605358 196 + 19675229 GGGGTCCCTTCGTGCAATAAGCCACGTTCTGAATACACCACGCCAGCCCCTGCAAACCCACAGGAAGTA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTACATGAAAGGACGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTCCGTCACCCTCCTT-CCCC-TTCTTCCCAGGCCTCTCTCTCAAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537577 196 + 16847902 GGGGTCCCTTCGTGCAATAAGCCACGTTCTGAATACACCACGTCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTACATGAAAGGATGTCAC-CCTGGGCCGACACCAGTGCCCACGCCATTCCGGGTTCCGTCACCCTCCCT-CCCC-TTCTTCCCAGGCCTCTCTCTCAAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468519 197 - 91754291 GGGGTCCCTTCGTGCAATAAGCCACATTCTGAATACACCACGCCAGCCCTTGTAAACCCACGGGAAGCA-CAGGGTGGCTTTTTAGAGGCACAAGGATCCTTACATGAAAAGATGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTTCATCACCCTCCTT-CCCCTTTCTTCCCAGGCCTCTCTCTCAAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652380 196 - 1977891 GGGGTCCCTTCGTGCAATAAGCCACGTTCTGAATACACCACGTCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTACATGAAAGGATGTCAC-CCTGGGCCGACGCCAGTGCCCACGCCATTCCGGGTTCCGTCACCCTCCCT-CCCC-TTCTTCCCAGGCCTCTCTCTCAAA i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980127 195 - 74750902 GGGGTCAGTTCATGCAGTGAGCCACATTCTGAATACACCAAGCCAGCCCTTACAAACCCACAGCAGGCA-TGGGGTGGCTTTTTAGAGGCACAAGAATCTTTAGATGAAGGAATGT-AC-CCGGCACCCACA-CAGTGCCCACGCCAAGCAGGGTTCCACCACTCTCCTTCCCCC-ATCTGCCCAGGCCTCTCTCTCAAA i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 498626 195 + 17725628 GGGGTCAGTTCATGCAGTAAGCCACATTCTGAATACACCTAGCCAGCCCTTATACACCCACAGGAGGCA-CGGGGTGGCTTTTTAGAGGCACACGAATCCTTAGATGAAGGAATGT-AC-CCTGCGCCCACACCAGTGCCCACGCCAACCAGGGTTCCACCACGCTCCTT-CCCC-ATCTTCCCAGGCCTGTCTCTCAAA i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 471933 193 - 6778120 GGGGTCAGTTCATGCAGTAAGCCACATTCTGGACACACCGAG-CAGCCCTTACAAACCCACAGGAGGCA-CGGGGTGGCTTTTTAGAGGCACAAGAGTCCTTAGATGAAGGAATGT-GC-GCTGCGCCCACACTAGTGCCCACGCCAACCGGGGTTCCACCACGCTCCTTCCCCC-ATCTTCCCAGGCC--TCTCTCAAT i cebCap1.NW_016107444v1 I 51 C 0 s aotNan1.NW_018507959v1 30445 196 - 3732694 GGGGTCGGCTCATGCAGTAAGCCGCATTCTGAATACACCTAGCCAGCCCTTACAAACCCACAGGAGGCA-CGGGGTGGCTTCTTAGAGGCACAGGAATCCTTACATGAAGGAACGT-AC-CCTGCGCCCACACTACTGCCCACGCCAACCAGGGTTCTACCACATTCCTTCCCCC-GTCTTCCCAGGCCTCTCTCTCAAA i aotNan1.NW_018507959v1 I 1 C 0 s otoGar3.GL873829 472467 171 - 608964 AAGGTCAGTTCATGCAAT-AGCCACATTCTGAATAAACTAAGCTAGACCTTGCAAACCCACAGGAAG-G-GAGGATGGCTCTTTAGAGGCCTGAAGATCCCTGGATGAATGGATATAGC-CCTGAGCCAATAGAGGTGCCCACTCCATTCCTGGATCCATTGGCCTCCTC------GTCTT------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65467848 128 - 98207768 TGAGTCTGTCCAGGCAATAAGGCACATTTGAAGCAAAGCAAGGCAGTACATGCAAGCGCACAGGACG------GGTAGT------------------TCCTGAGGTGTAGGGACCTGCCACTTGAGCCAACAGAGGTGTC--------------------CACTTTACTTCC---------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29108751 169 + 31377067 -GGGGACGCTCACGCAATGAGCCCCGTCCT-ACTAAGTCACGCCAGCCTTTGCAAACCCACAGGAAAGACCGGGGTGGCCTTTCAGAGGCTCAAGAATGCTTGGATGAATGGAAATG---CCTGAGCCAACAGATGTGC-------------------------CTTCCCCTCCT-GGCTTCGCCCTCCTCACCCTCGAA i canFam3.chr33 C 0 I 45 s dasNov3.JH569502 3943671 168 + 6579706 GGAGACAGCTTACGTGATGAGCCACGTTCCAAACGAGCCAAGCCAGCCCTC-CAAGCCCACAGGAAGCC-CAGGGGGGCTTTTTAGAGGTACAAGGACCCTTAGATGAATGGCAACGGT-CCTGAGCA----------------------------CCCTGCCCCTCACCGTCCT-GTCTTCCTCCCCACCTGTATAAAA i dasNov3.JH569502 C 0 C 0 e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=94332.000000 s hg38.chr3_KI270779v1_alt 186030 12 + 205312 Cacgtctttatg s panTro5.chr3 200172936 12 + 202621043 Cacatctttatg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129695 12 + 190779 Cacatctttatg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20265 12 - 189199 CACGTCTTTATG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934546 12 + 123690457 CACGTCTTTATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513680 12 + 204787373 CGTGTCTTTATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119100 12 + 192460366 CGTGTCTTTATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605554 12 + 19675229 CGTGTCTTTATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537773 12 + 16847902 TGTGTCTTTATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468716 12 - 91754291 CGTGTCTTTATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652576 12 - 1977891 CGTGTCTTTATG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980322 12 - 74750902 CAGGTCTCTATG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498821 12 + 17725628 CACGTCTTCATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 472126 12 - 6778120 CACGTCTTTATG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 30641 12 - 3732694 CACGTCTTTATG i aotNan1.NW_018507959v1 C 0 I 276 s dasNov3.JH569502 3943839 12 + 6579706 CAAGTTAGGGTG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 472638 0 - 608964 C e mm10.chr16 65467976 0 - 98207768 C e canFam3.chr33 29108920 45 + 31377067 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=10500.000000 s hg38.chr3_KI270779v1_alt 186042 1 + 205312 g s panTro5.chr3 200172948 1 + 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129707 1 + 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20277 1 - 189199 G i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934558 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513692 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119112 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605566 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537785 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468728 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652588 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980334 1 - 74750902 G i calJac3.chr17 C 0 I 10 s saiBol1.JH378146 498833 1 + 17725628 G i saiBol1.JH378146 C 0 I 10 s cebCap1.NW_016107444v1 472138 1 - 6778120 G i cebCap1.NW_016107444v1 C 0 I 129 s dasNov3.JH569502 3943851 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 472638 0 - 608964 C e mm10.chr16 65467976 0 - 98207768 C e canFam3.chr33 29108920 45 + 31377067 I e aotNan1.NW_018507959v1 30653 276 - 3732694 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=47181.000000 s hg38.chr3_KI270779v1_alt 186043 14 + 205312 cttttc---------------------tttttttt s panTro5.chr3 200172949 14 + 202621043 cttttc---------------------tttttttt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129708 13 + 190779 cttttc----------------------ttttttt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20278 14 - 189199 Cttttc---------------------tttttttt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934559 32 + 123690457 Cttttctttttttct---tcttttttttttttttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513693 26 + 204787373 Cttttctc------t---ttttttttttttttttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119113 28 + 192460366 Cttttctc----ttt---ttttttttttttttttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605567 26 + 19675229 Cttttctc------t---ttttttttttttttttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537786 28 + 16847902 Cttttctc----ttt---ttttttttttttttttt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468729 25 - 91754291 Cttttctc----------ttttttttttttttttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652589 32 - 1977891 CTTTTCtcttttttt---ttttttttttttttttt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980345 35 - 74750902 CTTttctctttccttttcttttcttttcctttctt i calJac3.chr17 I 10 C 0 s saiBol1.JH378146 498844 32 + 17725628 Cttttctctttcctt---ttttcttttcctttctt i saiBol1.JH378146 I 10 C 0 s dasNov3.JH569502 3943852 14 + 6579706 --------------------CTCCCCTCCTTTCT- i dasNov3.JH569502 C 0 I 124 e otoGar3.GL873829 472638 0 - 608964 C e mm10.chr16 65467976 0 - 98207768 C e canFam3.chr33 29108920 45 + 31377067 I e aotNan1.NW_018507959v1 30653 276 - 3732694 I e cebCap1.NW_016107444v1 472139 129 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=191410.000000 s hg38.chr3_KI270779v1_alt 186057 57 + 205312 ttagacagag-----------------tcttgctctgtca---------------------------cccaagctag-----agtgc-----tgccatttcggctccctgc s panTro5.chr3 200172963 57 + 202621043 ttagacagag-----------------tcttgctctgtca---------------------------cccaagctag-----agtgc-----tgccatttcggctcactgc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129721 57 + 190779 ttagacagag-----------------tcttgctctgtca---------------------------cccaagctag-----agtgc-----tgccatttcggctcactgc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20292 57 - 189199 ttagacagag-----------------tcttgctctgtca---------------------------cccaagctag-----agtgc-----tgccatttcggctcactgc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934591 62 + 123690457 ttagacagag-----------------tcttgctctgtca---------------------------tccaagctagagtgcagtgc-----tgccatttcggctcagtgc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513719 62 + 204787373 tttgatggag-----------------tctcgctctgtca---------------------------cccaaggtag-----agggccatggtgtgatctcggctcactgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119141 62 + 192460366 tttgatggag-----------------tctcgctctgtca---------------------------cccaagctag-----agggccgtggtgtgatctcggctcactgc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605593 62 + 19675229 tttgatggag-----------------tctcgctctgtca---------------------------cccaagctag-----agggccatggtgtgatctcggctcactgc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537814 62 + 16847902 tccgatggag-----------------tctcgctctgtca---------------------------cccaagctag-----agtgccgtggtgtgatctcggctcactgc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468754 62 - 91754291 tttgttggag-----------------tctcgctctgtca---------------------------cccaagctag-----agtgccgtggtgtgatctcggctcactgc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652621 62 - 1977891 tttgatggag-----------------tctcgctctgtca---------------------------cccaagctag-----agtgccgtggtgtgatctcggctcaccgc i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980380 68 - 74750902 tc-------------------------cttCCTTCCTTCC-------------TTCCTAACTCTCATcccaggctgg-----agtgcagtggcaccatctctgctggccga i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498876 106 + 17725628 tctatttttcctccttccttcttttttcttCCCTCCCTCCCTCTCTGCCTCCATTCCTAACTCTCATcccaggctgg-----agtgcagaggcaccatctctgctggctga i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65467976 12 - 98207768 -----------------------------TGGCTCCATTG---------------------------T------------------------------------------- i mm10.chr16 C 0 C 0 e otoGar3.GL873829 472638 0 - 608964 C e dasNov3.JH569502 3943866 124 + 6579706 I e canFam3.chr33 29108920 45 + 31377067 I e aotNan1.NW_018507959v1 30653 276 - 3732694 I e cebCap1.NW_016107444v1 472139 129 - 6778120 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=152067.000000 s hg38.chr3_KI270779v1_alt 186114 19 + 205312 aacctctgcctcccaggtt s panTro5.chr3 200173020 19 + 202621043 aacctctgcctcccaggtt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129778 19 + 190779 aacctctgcctcccaggtt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20349 19 - 189199 aacctctgcctcccaggtt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934653 19 + 123690457 aacctctgcctcccaggtt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513781 19 + 204787373 aacctgtgcctcccgggtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119203 19 + 192460366 aacctgtgcctcccgggtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605655 19 + 19675229 aacctgtgcctcccgggtt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537876 19 + 16847902 aacttccgcctcccgggtt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468816 19 - 91754291 aacctctgcctcccaggtt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652683 19 - 1977891 aacctgtgcctcccaggtt i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980448 19 - 74750902 aaccgctgcctcctgggtt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 498982 19 + 17725628 aaccgctgcctcctgggtt i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 472268 19 - 6778120 aaccgctgcctcctgggtt i cebCap1.NW_016107444v1 I 129 C 0 s otoGar3.GL873829 472638 12 - 608964 -------GCCTCCCAGCTT i otoGar3.GL873829 C 0 I 26 s mm10.chr16 65467988 19 - 98207768 ACTCCCTGCCTGCTAACTC i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3943866 124 + 6579706 I e canFam3.chr33 29108920 45 + 31377067 I e aotNan1.NW_018507959v1 30653 276 - 3732694 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=599011.000000 s hg38.chr3_KI270779v1_alt 186133 95 + 205312 caagccattctcctacctcagcctcccgagtagctggaattacaggcgctcgccaccacgcccggcaaaattttttatttttagtggagac-aggg s panTro5.chr3 200173039 95 + 202621043 cacgccattctcctgcctcagcctcccgagtagctggaattacaggcgctcgccaccacgcccggcaaaattttttatttttagtggagac-ggag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129797 95 + 190779 cacgccattctcctgcctcagcctcccgagtagctggaattacaggcgctcgccaccacgcccggcaaaattttttatttttagtggagac-ggag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20368 95 - 189199 caagccattctcctgcctcagcctcccgagtagctggaattacaggtgctcgccaccacgcccggcaaaattttttatttttagtggagac-gggg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934672 95 + 123690457 caagcgattctcctgcctcagcctcccgagtagctggaattacaggtgctcgccaccacgcccagcaaaattttttatttttagtggagac-gggg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513800 95 + 204787373 caagcaattctcctgcctcagcctcccgaggagctggaattacaggcgcccgtcaccatgcctggcaaaatgttgtatttttagtggagac-gggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119222 95 + 192460366 caagcaattctcctgcctcagcctcccgaggagctggaattacaggcgcccgtcaccatgcctggcaaaatgttgtatttttagtggagac-gggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605674 96 + 19675229 caagcgattctcctgcctcagcctcccgaggagctggaattacgggcgcccgccaccatgcctggcaaaatgttgtatttttagtggagacagggg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537895 95 + 16847902 caaacgatcctcctgcctcagcctcccgaggagctggaattacaggtgcccgccaccatgcctggcaaaatgttgtatttttagtggagac-gggg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468835 95 - 91754291 caaatgattctcctgcctcagcctcccgaggagctggaattacaggcgcccgccaccatgcctggcaaaatgttgtatttttagtggagac-gggg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652702 95 - 1977891 caaacgattctcctgcctcagcctcccgaggagctggaattacaggcgcccgccaccatgcctggcaaaatgttgtatttttagtggagac-gggg i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980467 92 - 74750902 caagtgcttctactgcctcaacctcctgagtagctgggattacaggcacctgccactacacccagct--tttttgtgtttttagta-agac-gggt i calJac3.chr17 C 0 I 9 s saiBol1.JH378146 499001 94 + 17725628 caagtgattctcctgcctcaacctcctgagcagctgggattaca-gcgcctgacaccacacccagctaatttttgtatttttagtagagag-gggt i saiBol1.JH378146 C 0 I 9 s cebCap1.NW_016107444v1 472287 95 - 6778120 caagtgattctccggcctcaacctcctgagtagctgggactacaggtgcccgccactacacccagctacgttttgtatttttagtagagac-gggt i cebCap1.NW_016107444v1 C 0 I 9 s mm10.chr16 65468007 25 - 98207768 -------------CACCCCACCCCCATCAGAA---GGAACC------------------------------------------------------- i mm10.chr16 C 0 C 0 e otoGar3.GL873829 472650 26 - 608964 I e dasNov3.JH569502 3943866 124 + 6579706 I e canFam3.chr33 29108920 45 + 31377067 I e aotNan1.NW_018507959v1 30653 276 - 3732694 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=720453.000000 s hg38.chr3_KI270779v1_alt 186228 91 + 205312 ttggccaagctggtcttgaactcctgacctcaggtgatccacccgcctgggcctccaaaagtgctgggattaca-gcgtgagccaccgcgcc s panTro5.chr3 200173134 91 + 202621043 ttggccaggctggtcttgaactcctgacctcaggtgatccacctacctgggcctccgaaagtgctgggattaca-gcgtgagccaccgcgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129892 91 + 190779 ttggccaggctggtcttgaactcctgacctcaggtgatccacccacctgggcctccgaaagtgctgggattaca-gcgtgagccaccgcgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20463 91 - 189199 ttggccaggctggtcttgaactcctgacctcaggtgatccacccacctgggcctctgaaagtgctgggattacg-gcgtgagccaccgcgcc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934767 91 + 123690457 ttggctaggctggtcttgaactcgtgaccacaggtgatccacccacctgggcctccgaaagtgctgggattaca-gcgtaagccaccgcacc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513895 92 + 204787373 ttggccaggctagtcttgaactcctgacctcaggtgacccaccaacctgggtctccgaaagtactgggattacaggtgtgagccaccgcgcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119317 92 + 192460366 ttggccaggctagtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605770 92 + 19675229 ttggccaggctggtcttgaacgcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 537990 92 + 16847902 tcggccaggctggtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 468930 92 - 91754291 ttggccaggctggtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652797 92 - 1977891 tcggccaggctggtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcc i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980568 92 - 74750902 ttggccaggctagcctcaaactcctgacctcaggtgatttgcctgcctcggcctcccaaagtgctgagattacaggcgtgagcccccgcgcc i calJac3.chr17 I 9 C 0 s saiBol1.JH378146 499104 92 + 17725628 ttggccaggctgctctcgaacccctgacctcaggtgatccgcccgccttggcctcccaaagagctgagatgacagacgtgagccgccgcgcc i saiBol1.JH378146 I 9 C 0 s cebCap1.NW_016107444v1 472391 91 - 6778120 ttggccaggctggtctcaaactcctgacctcaggtgatctgccggcctcagcctcccaaagtgctgggatcaccg-cgtgagccgccacgcc i cebCap1.NW_016107444v1 I 9 C 0 s aotNan1.NW_018507959v1 30929 92 - 3732694 ttggccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcc i aotNan1.NW_018507959v1 I 276 C 0 s mm10.chr16 65468032 17 - 98207768 ---------------------------------------------------CTTTCAAAGATGTTTGC------------------------ i mm10.chr16 C 0 C 0 e otoGar3.GL873829 472650 26 - 608964 I e dasNov3.JH569502 3943866 124 + 6579706 I e canFam3.chr33 29108920 45 + 31377067 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=50333.000000 s hg38.chr3_KI270779v1_alt 186319 5 + 205312 cggcc s panTro5.chr3 200173225 5 + 202621043 cggcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129983 5 + 190779 cggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20554 5 - 189199 tggcc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934858 5 + 123690457 cggcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513987 5 + 204787373 cggcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119409 5 + 192460366 cggcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605862 5 + 19675229 cggcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538082 5 + 16847902 cggcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469022 5 - 91754291 cggcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652889 5 - 1977891 cggcc i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 980660 5 - 74750902 tggcc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499196 5 + 17725628 cggcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 472482 4 - 6778120 -ggcc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31021 5 - 3732694 cggcc i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 472676 5 - 608964 CGTAT i otoGar3.GL873829 I 26 C 0 s mm10.chr16 65468049 5 - 98207768 AGGCC i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3943866 124 + 6579706 I e canFam3.chr33 29108920 45 + 31377067 I e colAng1.NW_012118932v1 504810 9616 + 7796314 M a score=11504.000000 s hg38.chr3_KI270779v1_alt 186324 1 + 205312 c s panTro5.chr3 200173230 1 + 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129988 1 + 190779 c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20559 1 - 189199 C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934863 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513992 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119414 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605867 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538087 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469027 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652894 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 514608 1 + 7796314 C i colAng1.NW_012118932v1 M 9616 C 0 s calJac3.chr17 980665 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499201 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 472486 1 - 6778120 C i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31026 1 - 3732694 C i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 472681 1 - 608964 T i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65468054 0 - 98207768 C e dasNov3.JH569502 3943866 124 + 6579706 I e canFam3.chr33 29108920 45 + 31377067 I a score=1112975.000000 s hg38.chr3_KI270779v1_alt 186325 125 + 205312 tttatgccttttctactttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagtagccccttccccctgggctcagtttgccgatgaagagcctaagactccagagccaaa-agg- s panTro5.chr3 200173231 125 + 202621043 tttatgccttttctactttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagtagccccttccccctgggctcagtttgccgatgaagagcctaagactctggagccaaa-agg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 129989 125 + 190779 tttatgccttttctactttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagtagccccttccccctgggctcagtttgccgatgaagagcctaagactctggagccaaa-agg- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20560 123 - 189199 TTTATGCCTTTTCTActttacaccagatgctgtctcgtttcatgctcatgacaaccctacgtagtagccccttcccgc-gggctcagtttgccgatgaagagcctaagactccagagcc-aa-agg- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934864 123 + 123690457 TATATGCATTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccttacgtagtaaccccttccccttgggct--gtttgccgatgaagagcctgagactccagagccaaa-ggg- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202513993 126 + 204787373 TTTATGACTTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagcagccccttccccttgggctcagtttgccgacggagaccctgagactccagagccaaagggg- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119415 124 + 192460366 TTTATGACTTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagcagccccttccccttgggctcagtttgccgacgaagacc--gagactccagagccaaagggg- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605868 123 + 19675229 TTTATGACTTTTCTACTTTACACCAGATGCTGTCTCGTTTCATCCTCATGACAACCCTAC-TAGCAGCCCCTTCCCCTTGGGCTCAGTTTGCCGACGAAGACC--GAGACTCCAGAGCCAAAGGGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538088 115 + 16847902 TTTATGA-TTTTCTACTTTACACCAGATGCTGCCTCGTTTCATCCTCATGACAGCCCCACG----------TTCCCCTCGGGCTCAGTTTGCCGACGAAGACCCTGAGACTCCAGAGCCAAAGGGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469028 126 - 91754291 TTTATGACTTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccctacatagcagccccttccccttgggctcagtttgctgacgaagaccctgagactccagagccaaagggg- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 652895 126 - 1977891 TTTATGacttttctactttacaccagatgctgtctcgtttcatcctcatgacagccctacgtagcagccccttccccttgggctcagtttgccgacgaagaccctgagactccagagCCAAAGGGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 514609 123 + 7796314 TTTATGAGTTttctactttacaccagatgctgtctcgtttcatcctcatgacaaccctatgtagtagCCCCTCCCCCTTGGGCTCAGTTTGCCGAC---GACCCTGAGACTCCAGAGCCAAAGGGG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 980666 109 - 74750902 CCTATGGCTTTTCTACTTCACACCAGATGCTGCCTCG-TTCATTCTCATGACACCC---------------TTCCTTTTGGGCTGAGATTGCTGACGAAGAGCCTGAGACTCCAGAGCCGAA-GGG- i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 499202 110 + 17725628 CTTACGGCTTTTCTACTTCACACCAGATGCTGCCTCGTTTCATTCTCATGACAACC---------------TTCCTCTTGGGCTGAGCTTGCCGGTGAAGAGCCTGAGACTCCAGAGCCGAA-GGG- i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 472487 108 - 6778120 CTTGTGGCTTTTCTACCCTACACCAGATGCTG-CTCGTTTTATTCTCATGACAACC---------------TTCCTCTTGGGCTGAGATTGCTGATGAAGAGCCTGAGGCTCCAGAGCCG-G-GGG- i cebCap1.NW_016107444v1 C 0 I 5 s aotNan1.NW_018507959v1 31027 110 - 3732694 CTCACGGCTTTTCTACTTTACACCAGATGCTGCCTCATTTCATTCTCATGACAACC---------------TTCCTCTTGGGCTGAGATTGCCGATGAAGAGCCCGAGACTCCAGAGCCGAA-GGG- i aotNan1.NW_018507959v1 C 0 I 12 s otoGar3.GL873829 472682 110 - 608964 TTTATGGCTCTTTTGCTTCATGGGAGGTGCCatcttgtttcatcctcatgacagccc--------------ttctcatttaactcagtgtgctaatga-gaacttcagactctggaggtaac-agg- i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65468054 104 - 98207768 ------------CTTCTT-------GATGCTATCTCAATTTATCCTCGTGACGATGCTACACTACAGTCCCTTCCT-TTAGACTC-GTTTGCCATCTAGCACGCTGAGACTGTCCGGCCACA-GAC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29108965 103 + 31377067 TTTACGGCTCTTCCACTTTACAGCAGACACTACCTCGTTGTATCCTCACCACAATGC--------------TTCCCACTTAACTCATTTTGCCAATAAAGTCACCAA---------CCTAAA-GGGA i canFam3.chr33 I 45 C 0 e dasNov3.JH569502 3943866 124 + 6579706 I a score=59624.000000 s hg38.chr3_KI270779v1_alt 186450 9 + 205312 cgttgcctg s panTro5.chr3 200173356 9 + 202621043 cgttgcctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130114 9 + 190779 cgttgcctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20683 9 - 189199 cattgcctg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934987 9 + 123690457 tgttgcctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514119 9 + 204787373 cgttgccTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119539 9 + 192460366 cgttgccTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 605991 9 + 19675229 CGTTGCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538203 9 + 16847902 CGTTGCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469154 9 - 91754291 cgttgccTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653021 9 - 1977891 CGTTGCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 514732 9 + 7796314 CGTTGCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 980780 8 - 74750902 CGCTGCTG- i calJac3.chr17 I 5 C 0 s saiBol1.JH378146 499317 8 + 17725628 CGCCGCTG- i saiBol1.JH378146 I 5 C 0 s cebCap1.NW_016107444v1 472600 8 - 6778120 CGCTGCTG- i cebCap1.NW_016107444v1 I 5 C 0 s otoGar3.GL873829 472793 9 - 608964 ccttgcctg i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65468158 9 - 98207768 CTTTGCCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29109068 9 + 31377067 CTCTTCTCA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3943866 124 + 6579706 I e aotNan1.NW_018507959v1 31137 12 - 3732694 I a score=2333506.000000 s hg38.chr3_KI270779v1_alt 186459 242 + 205312 tgttccctgggctgccaag--ggcgtcgctgatgctgga-cctctgagtttcagcccctgctc-ttccctgtg--caccttgctg-GTCGTTGGCCAAAATTTGGCTGATGTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTTTGAGTGTCCTGGAGCA-CAGTG-GGGTTTCCCAG-------AGGGGCAGAGGGGTCTGTG---GAGAGTTTTGGTGTCCTCGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACT s panTro5.chr3 200173365 242 + 202621043 tgttccctgggctgccaag--ggcgtcgctgatgctgga-cctctgagtttcagcccctgctc-ttccctgtg--caccttgctg-GTCGTTGGCCAAAATTTGGCTGATTTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTTTGAGTGTCCTGGAGCA-CAGTG-GGGTTTCCCAG-------AGAGGCAGAGGGGTCTGTG---GAGAGTTTTGGTGTCCTCGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130123 242 + 190779 tgttccctgggctgccaag--ggcgtcgctgatgctgga-cctctgagtttcagcccctgctc-ttccctgtg--caccttgctg-GTCGTTGGCCAAAATTTGGCTGATTTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTTTGAGTGTCCTGGAGCA-CAGTG-GGGTTTCCCAG-------AGAGGCAGAGGGGTCTGTG---GAGAGTTTTGGTGTCCTCGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20692 242 - 189199 tgttccctgggctgccaag--ggcgtcgctgatgctgga-cctctgagtttcagcccctgctc-ttccctgtg--caccttgctg-GTCGTTGGCCAACATTTGGCTGATTTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTTTGAGTGTCCTGGAGCA-CTGTG-GGGTTTCCCAG-------AGGGGCAGAGGGGTCTGTG---CAGAGTTTTGGTGTCCTCGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120934996 242 + 123690457 tgttccccgggctgccaag--ggcgtcgctgacgctgga-cctctgagtttcagcacctgctc-ttccctgtg--caccttgctg-GTGGTTGGCCAAAATTTGGCTGATTTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTCTGAGTGTCCTGGAGCA-CAGTG-GGGTTTCCCAG-------AGGGCCAGAGCGGTCTGTG---GAGAGTTTTCGTGTCCTTGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514128 240 + 204787373 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGCGCTGGG-CCTCTGGGTTCCAGCTCCTGCTC-TCTGCTGTG--CCCTTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTTTTGGCGGGACCTCCTGTCCCGGGATCCTCTCCCTCTGCATGTCCTGGAGCA-CAGTG-GGGTTT-CCAG-------AGG-GCAGAGGGGTCTATG---GAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119548 240 + 192460366 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGCGCTGGG-CCTCTGGGTTCCAGCTCCTGCTC-TCTGCTGTG--CCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTCTTGGCGGGACCTCCTGTCCCGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-CCAG-------AGG-GCAGAGGGGTCTATG---GAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606000 240 + 19675229 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGCGCTGGG-CTTCTGGGTTCCAGCTCCTGCTC-TTTGCTGTG--CCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTCTTGGCGGGACCTCCTGTCCCGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-CCAG-------AGG-GCAGAGGGGTCTATG---GAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538212 240 + 16847902 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGCGCTGGG-CCTCTGGGTTCCAGCTCCTGCTC-TTTGCTGTG--CCCCTTGCTG-GTCATTGGCCACAGTTTGGCTGATTTTCTTGGCGGGACCTCCCGTCCTGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-CCAG-------AGG-GCAGAGGGGTCTATG---GAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469163 241 - 91754291 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGCGCTGGG-CCTCTGGGTTCCAGCTCCTGCTC-TTTGCTGTGCCCCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGA-TTTCTTGGCAGGACCTCCTGTCCCGGGATCCTCTCCTTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-CCAG-------AGG-GCAGAGGGGTCTATG---GAGAGTTTTGGTGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653030 240 - 1977891 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGCGCTGGG-CCTCTGGGTTCCAGCTCCTGCTC-TTTGCTGTG--CCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTCTTGGCGGGACCTCCCGTCCTGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-CCAG-------AGG-GCAGAGGGGTCTATG---GAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 514741 242 + 7796314 TGTTCCCCGGGCTGCCAAG--GGCGTCGCTGGTGCTGGG-CCTCTGGGTTTCAGCTCCTGCTG-TTTGCTGTG--CTGCTTGCTG-GTCGTTGGCCACAATTTGGCTGATTTTCTTGGCAGGACCTCCTGCCCCGGGATCCTCTCCTTCTGAGTGTCCTGGAGCT-CAGTG-GGGTTTCCCAG-------AGGAGCAGAGGGGTCTATG---GAGAGTTTTGGCGTCCTTGGTGGCAAGTTGAGGTGG-------CCTCTCCCAGACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 980788 224 - 74750902 GGTTCCCCGG-CTGCTGAG--GGCGCCGCTGACACTGGG-CCTCTGAGTTTCAGCTCCTGCTC-CTCACTTTG--CACCTTGCTG-GTCCTCGGCGGAA-TTTGGCTGATTTTCTTAGCAGGACCTCTTGTC---------------TCTCAGTGTCCTGGAGCA-CAGCG-GGCTTC-CCGG-------AGGGGCAGAAGGGTCTGTG---GACAGTTTTGGTGTCCTAGGTGGCAAGTTGAGGTGG-------CCTCTCCCAGACT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499325 203 + 17725628 GGTTCCCCCG---------------------------------------TCCGGCCCCCGCTC-CTCACTTTG--CTCCTTGCTG-GTCCTTGGCGGAA-TTTGGCTGATTTTCTTAGCGGGACCTCTTGCCCAGGGATCCTTTCCTTCTCAGTGTCCTGGAGCA-CAGTG-GGTTTC-CCGG-------AGGGGCAGAGGGGTCTGTG---GAGAG-TTTGGTGTCCTTGGTGGCAAGTGGAGGTGG-------CCTCTCCCAGACT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 472608 238 - 6778120 GGTTCCCTGG-CTGCGGGG--GGCGCCGCTGACACTGGG-CCTCTGAGTGTTGGCTCCTGCTC-CTCACTTTG--CACCTTGCTG-GTCCTTGGCGGAA--TTGGCTGATTTTCTTAGCAGGACCTCTTGTCCAGGGATCCTTTCCTTCTCAGTGTCCTGGAGCA-CAGTG-GGTTTC-CCCG-------AGGGGCAGAGGGGTCTGGG---GAGAGTTTTGGTGTCCTTGGTGGCAAGTTGAGGTGG-------CCTCTCCCAGACT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31149 237 - 3732694 GGTTCCCCGG-CTGCCGAG--GGCACCCCTGACACTGGG-CCGCTGAGTTTCGGCTCCTGCTC-CTCAC--TG--CACCTTGCTG-GTCCTTGGCGGAA-TTTGGCCGATTTTCTTAGCAGGACCTCTTGTCCAGGCATCCTTTGCTTCTCGGTGTCCTGGAGCA-CAGTG-GGTTTC-CCAG-------AGGGGCAGAGGGGTCTGTG---GAGAGTTTTGGTGTCCTTGGCGGCAAGCTGAGGTGG-------CCTCTCCCAGACT i aotNan1.NW_018507959v1 I 12 C 0 s otoGar3.GL873829 472802 246 - 608964 tactccctgggctggtaag-tggcaaca-tgacaatggg-tcttctgatttaagttcctgctcggtcactgta--cATCTGGCTG-GCCACTGAACTAAATTTGATTGATTTTCTTGGCAGGACCTCTTGTCCAGGGATCCTTTACTTGTGGGCATCCCCAAGCA-CATTGAGGGTTT-CCAG-------GGGGACAGGTGGGTCTGTGGGAGGGGGGGTTGGTATCCTCAGGAACAAGTATGGGTGG-------CCTTCCCCAGACC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65468167 218 - 98207768 TGCTGCCTGG-CTGCCGAG--CTCTTC----------------------TACAGTCACATCTA-TT-GTTGAG--TCCCTCGCCT-GC-----------ATCTCTTTGCTTTCCTCGACAGACTATCCTGTACAAAGATCCTCTTCTTCTGAATGTCCTTGGGCAGGGGTG-GGGGACCTCAGGGCAGGAGGGGACAGATGTGCCTGTG-----GAGTTTCAG---CCTTGGCTGCAGGCTGGGGGGGGGGGGGCACTTTCTTAACCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29109077 243 + 31377067 TGTCCCCTGGGCTGCCTAAGTGGCAACATTCACTCAAAGTTTTCTGATTTGAAGTTCCTGCTC-TTTGCTGTA--CATTTTGCTGAACCACTGACCTAAATTTGATCTATCTTCTTACTAGGACCTCTTGTTCAGGGGTTCTCTCCTTTTGGGTGTCTCCAAGCA-CAGCGAGAGTTTCCTGG-------GGTGGGAGTGGGG---GAG---CAGATGGCCTGTGCCCTTGGTGGCA-TCTGGGTAGG-------CCTCTCCCAGACT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3943866 124 + 6579706 I a score=1233341.000000 s hg38.chr3_KI270779v1_alt 186701 128 + 205312 GACAGATAGACCGGGGGTTCTCCGAGGAGGGGCCCATAAAGACCCTTCCCCGT-----------GGAGTGCGCTGTGGCCG-GCGTCccctcccctgcctgccctgcacttgctccag---cctgtcacctc----------cct-g-------------------------------------GGGTCAC s panTro5.chr3 200173607 128 + 202621043 GACAGAGAGACCGGGGGTTCTACGAGGAGGGGCCCATAGAGACCCTTCCCCGC-----------GGGGTGCGCTGTGGCCG-GCGTCCCCTTCCCTGCCTGCCCTGCACTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130365 128 + 190779 GACAGAGAGACCGGGGGTTCTACGAGGAGGGGCCCATAGAGACCCTTCCCCGC-----------GGGGTGCGCTGTGGCCG-GCGTCCCCTTCCCTGCCTGCCCTGCACTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 20934 128 - 189199 GACAGACAGACCGGGGGTTCTCCGAGGAGGGGCCCATAGAGACCCTTCCCCGC-----------AGGGTGCGCTGTGGCCG-GCGTCCCCTCCCCTGCCTGCCTTGCACTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120935238 124 + 123690457 GAC----AGACCGAGGGTTCTCTGAGGAGGGGCCCATAAAGACCCTTCCCTGC-----------AGGGTGCGCTGCGGCCG-GCGTCCCCTCCCCTGCCTGCCCTGCACTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514368 127 + 204787373 GACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGGTGCGCTGTGGCCG-GCGTCTCC-TCCCTGCCTGTCCTGTGCTTGGTCCAG---CCTGTCACCTC----------CCT-G-------------------------------------GGGTCGC i rheMac8.chr2 C 0 I 6 s macFas5.chr2 119788 127 + 192460366 GACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------CGGGTGCGCTGTGGCCG-GCGTCTCC-TCCCTGCCTGTCCTGTGCTTGGTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606240 127 + 19675229 AACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGGTGCGCTGTGGCCG-GCGTCTCC-TCCCTGCCTGTCCTGTGCTTGGTCCAG---CCTGTCACCTC----------CCT-G-------------------------------------GGGTCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538452 127 + 16847902 GACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGCTGTGCTGTGGCCG-GCGTCTCT-TCCCTGCCTGTCGTGTGCTTGGTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469404 127 - 91754291 GACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGGTGCGCTGTGGCCG-GCGTCTCC-TCCCTGCCTGTCCTGTGCTTGGTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653270 127 - 1977891 GACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGCTGTGCTGTGGCCG-GCGTCTCC-TCCCTGCCTGTCCCGTGCTTGGTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 514983 128 + 7796314 GACAGACAGACTGCGGGTTCTCTGAGGAGGGGCCCATAGAGATTCTTCCCCTC-----------AGGGTGCGCTGTGGCCA-GCGTCTCCTTCCCTGCCTGTCCTGTGCTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------GGGTCAC i colAng1.NW_012118932v1 C 0 I 329 s calJac3.chr17 981012 124 - 74750902 GGCAGACAGACTGGGGGTTCTCAGAGGAGGAGCCCGTAGAGACCCTTCCCCTC-----------AAGGTGTGCTGTGACCA-GCGTCTCC-TCC---CCTGCCCTGCACCTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------TGGCTGC i calJac3.chr17 C 0 I 31 s saiBol1.JH378146 499528 123 + 17725628 GGCAGACAGACTGGGGGTTCTCCAAGGAGGAGCCCCTAGAAACCCTTCCCCTC-----------AAGGTGCGCTGTGGCCA--CGTCTCC-TCC---CCTGCTCTGCACTTGCTCAGT---CCTGTCACCTC----------CCC-G-------------------------------------TGGCTGC i saiBol1.JH378146 C 0 I 31 s cebCap1.NW_016107444v1 472846 121 - 6778120 GGCAGACAGACTGGGGGTTCTCC---GAGAAGCCCGTAGAGACCCTTCCCCTC-----------AAGGTGCACTGTGGCCG-GCGTCTCC-TCC---CCTGCCCTGCACTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------TGGCTGC i cebCap1.NW_016107444v1 C 0 I 31 s aotNan1.NW_018507959v1 31386 124 - 3732694 GGCAGACAGACTGGGGGTTCTCCGAGGAGGGGCCCATAGAGACCCCTCCCCTC-----------AAGGTGCGCTGTGGCCG-GCGTCTCC-TCC---CCTGCCCTGCACTTGCTCCAG---CCTGTCACCTC----------CCC-G-------------------------------------TGGCTGC i aotNan1.NW_018507959v1 C 0 I 25 s otoGar3.GL873829 473048 156 - 608964 GACAGATGGGTTGGAGGTTCTCTGAGCAGAAGCACACAGGAGACCTTCCCCTC-----------CGGGTAAGCTGAGGCTG-TC--CACC-TTCTGCCCTGCCCTGCCCTCACTCTAA---CCTGTCACCTC----------CTA-GTAGCTGCTCGGGGTGG------TGCCCCTCGGTCACTGGGTCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65468385 123 - 98207768 AACGAAAAGATTGGATGCTCTCTAAAAGAAGGCCAAGGATGCCCTTTTCCCT-------------GTGTATCCTGTGGCCAAGGGTCTCG-TC----TCCATCCTGCATTAGCAATGA---CCTCCTATCTT----------CCCAG-------------------------------------TGGCCAC i mm10.chr16 C 0 I 3 s canFam3.chr33 29109320 170 + 31377067 GCCAGACAGCCTAGAGGTTCTCTGAAAGAGGGAGAGCAGGACACCCTGCCCTCTGGGGCCCTCTGGGGTCCTCCGTGACGG-CGGTCATC-------TCTGGCCTGCACTTGAGGCAG--CCCCGTAAGCTC----------CCA-GTAATGGCCCAGGGCAGGGCAGTGGCCCCTCGATTACTGGGACAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3943990 129 + 6579706 GGCAGACAGACCTGAGGTTCTGGGAGGTGGGG-----AGGAGGCTTCCCTCCC-----------CGG---CCCTGTGGCTGTGGACCTCC-TCCCTTCCT---CTGGGCTGGCTATATGGCCCAGTAACCTCCAAGCAACAGCCC-A-------------------------------------GGGTCA- i dasNov3.JH569502 I 124 C 0 a score=129282.000000 s hg38.chr3_KI270779v1_alt 186829 21 + 205312 --TGATAGTG----CTGGAGACCAAGG s panTro5.chr3 200173735 21 + 202621043 --TGATAGTG----CTGGAGACCAAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130493 21 + 190779 --TGATAGTG----CTGGAGACCAAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21062 21 - 189199 --TGATAGTG----CTGGAGACCAAGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120935362 21 + 123690457 --TGATAGTG----CTGGAGACCAAGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514501 19 + 204787373 --TGATAGTGACCCTTGG------AGG i rheMac8.chr2 I 6 C 0 s macFas5.chr2 119915 25 + 192460366 --TGATAGTGACCCTTGGAGACCAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606367 25 + 19675229 --TGATAGTGACCCTTGGAGACCAAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538579 25 + 16847902 --TGACAGTGACCCTTGGAGACCAAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469531 25 - 91754291 --TGATAGTGACCCTTGGAGACCAAGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653397 25 - 1977891 --GGACAGTGACCCTTGGAGACCAAGG i manLeu1.NW_012102020v1 C 0 C 0 s calJac3.chr17 981167 21 - 74750902 --TGATAGTA----TTGGAGACCAAGG i calJac3.chr17 I 31 C 0 s saiBol1.JH378146 499682 21 + 17725628 --TGATAGTA----TTGGAGACCCAGG i saiBol1.JH378146 I 31 C 0 s cebCap1.NW_016107444v1 472998 19 - 6778120 --TGATAGTA----TTGGAGACCCA-- i cebCap1.NW_016107444v1 I 31 C 0 s aotNan1.NW_018507959v1 31535 21 - 3732694 --TGATAGTA----TTGGAGACCAAGG i aotNan1.NW_018507959v1 I 25 C 0 s otoGar3.GL873829 473204 15 - 608964 --TGATAGCA----TTGAAGA------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65468511 14 - 98207768 --AAGCAGCG----TTGTCA------- i mm10.chr16 I 3 C 0 s canFam3.chr33 29109490 21 + 31377067 --TGATAGTA----TTGGAGACTGGAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3944119 14 + 6579706 GCTCAGGGCG----GTGG--------- i dasNov3.JH569502 C 0 C 0 e colAng1.NW_012118932v1 515111 329 + 7796314 I a score=63409.000000 s hg38.chr3_KI270779v1_alt 186850 6 + 205312 CCTATT s panTro5.chr3 200173756 6 + 202621043 CCTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130514 6 + 190779 CCTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21083 6 - 189199 CCTATT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120935383 6 + 123690457 CCTATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514520 6 + 204787373 CCTATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119940 6 + 192460366 CCTATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606392 6 + 19675229 CCTATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538604 6 + 16847902 CCTATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469556 6 - 91754291 CCTATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653422 6 - 1977891 CCTATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515440 6 + 7796314 CCTATT i colAng1.NW_012118932v1 I 329 C 0 s calJac3.chr17 981188 6 - 74750902 CTTATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499703 6 + 17725628 CTTATT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 31556 6 - 3732694 CTTATT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473219 6 - 608964 TTTATT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65468525 5 - 98207768 -CCTCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29109511 6 + 31377067 TTGAGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3944133 6 + 6579706 CCCATT i dasNov3.JH569502 C 0 I 38 e cebCap1.NW_016107444v1 473017 0 - 6778120 C a score=692156.000000 s hg38.chr3_KI270779v1_alt 186856 63 + 205312 TCGACCCAGTTGCC--TTTCCCTGTGGCATGGAACCAGGACGGCCAGGCTTCCTTCTGAGTCATT s panTro5.chr3 200173762 63 + 202621043 TCGACCCAGTTGCC--TTTCCCTGTGGCATGGAACCAGGACGGCCAGGCTTCCTTCTGAGTCATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130520 63 + 190779 TCGACCCAGTTGCC--TTTCCCTGTGGCATGGAACCAGGACGGCCAGGCTTCCTTCTGAGTCATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21089 63 - 189199 TCGACCCAGTTGCC--TTTCCCTGTGGCATGGAACCAGGACGGCCAGGCTTCCTTCTGAGTCATT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120935389 63 + 123690457 TCAACCCAGTTGCC--TTTCCCTGTGGCGTGGAACCAGGACAGCCAGGCTTCCTTCTCAGTCATT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514526 63 + 204787373 TCAACCCAGTGGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 119946 63 + 192460366 TCAACCCAGTGGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606398 63 + 19675229 TCAACCCAGTGGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538610 63 + 16847902 TCAACCCAGTGGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469562 63 - 91754291 TCAACCCAGTTGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653428 63 - 1977891 TCAACCCAGTGGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515446 63 + 7796314 TCAACCCAGTTGCC--TTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCACT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981194 60 - 74750902 TCGACCCAGCTGCC--TTTCCCTGGGGCGTGGAATCACGA---CCCAGCTTCCTTCTGAGTCATT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499709 63 + 17725628 TCAACCATGCTGCC--TTTGCCTGGGGTGTGGAATCAGGACAGCCAGGCTTCCCTCTGAGTCATT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 473017 55 - 6778120 --------GCTGCC--TTTCCCTGGGGCGTGCAATCACAACAGCCAGGCTTCCTTCTGAGTCATT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31562 63 - 3732694 TCGACCCCGTTGCC--TTTGCCTGGGGCGTGGAATCACAAAGGCCAGGCTTCCTTCTGAGTCATT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473225 63 - 608964 CTGACCCAGTTTCC--TTACTGTGGGGCACGGAATCAGGGCTGCCAGGCTTCCTTCTGAGTCATT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65468530 62 - 98207768 GTGACTAGGTCACTGACGGTCCTAATG---GGAAGCATAGCTGCCGGGCTTCCTCGTGAGTCATT i mm10.chr16 C 0 C 0 s canFam3.chr33 29109517 53 + 31377067 TTGACCCAGTTTCC--TCGCGC-AGGGTGTGGAATCA---------GGCTTCTTTCCAACACATT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3944139 38 + 6579706 I a score=1757511.000000 s hg38.chr3_KI270779v1_alt 186919 167 + 205312 CCTGCCTGGGGCGACCAGTAGACACCAAATTTCCATCTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGCGGCAGC-TCCTTTGTGGAAACC-CT----------GTGTTTTTCCTCTGGCCTGG s panTro5.chr3 200173825 167 + 202621043 CCTGCCTGGGGCGACCAGTAGACACCAAATTTCCATCTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGCGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130583 167 + 190779 CCTGCCTGGGGCGACCAGTAGACACCAAATTTCCATCTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGCGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21152 168 - 189199 CCTGCCTGGGGCGACCAGTAGACACCAAATTTCCATCTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGCGGCGGCAACCTTTGTGGAAACC-CC----------GGGTTTTTCCTCTGGCCTGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120935452 137 + 123690457 CCTGCCTGGGGCGACT-GTAGACACCAAATTTCCATTTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCT-----------------------------------------GGGATTTTCCTCTGACCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202514589 167 + 204787373 TCTGCCTGGGGCCACCAGTGGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAATCCTCATTGTGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120009 167 + 192460366 CCTGCCTGGGGCCACCAGTGGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAATCCTCATTGTGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606461 167 + 19675229 CCTGCCTGGGGCCACCAGTGGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCATCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAATCCTCATTGTGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538673 167 + 16847902 CCTGCCTGGGGCCACCAGTAGACACCAAATTTCCATTTG-TCCTCCTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGTGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469625 167 - 91754291 CCTGCCTGGGGCCACCAGTAGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCTTTAAGGAAACCCTCATTGTGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653491 167 - 1977891 CCTGCCTGGGGCCACCAGTGGACACCAAATTTCCATTTG-TCCTCCTCTAGCCCACCTCTGT-CTGCTGTGCCTT--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGTGGCGGC-TCCTTTGTGGAAACC-CT----------GGGTTTTTCCTCTGGCCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515509 167 + 7796314 CCTGCCCGGGGCCACCAGTAGACACCAAATATCCATTTG-TCCTCCTCCGGCCCACCTCTGT-CTGCTGTGCCTT--ATC----GTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGTGGTGGC-TCCTTTGTGGAAACC-CT----------GGGCTTTTCCTCTGGCCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981254 167 - 74750902 CCTGCCTCCAGCAACCAGTAGACACCAAGT-TCCGTCTG-TCCTTGTCCAGCCCACCTCTGTCCCGCTGCGCCTA--ATC----CTTTAACCCTTGCGAGCCAGGGCTGTTCCTTAAGGAAGCCCTCATTGTGGCGGC-TGCTCTGTGGACACC-CT----------GGGCTTTCCCTGTGACCTTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499772 162 + 17725628 CCGGCCTCCAGCAACCAGTAGACACCAAGT-TCCTTCTG-TCCTTGTCCAG----CCTCTGTCCTGCTGCGCCTG--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAGCCCTCATTGTGGCAGC-TGCTTTGTGGAAACC-CT----------GGGCTTTCCCTCTG-CCTTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 473072 166 - 6778120 CCTGCCTCCAGCAACCAGTAGACACCAAGT-TCCTTCTG-TCCTTGTCCAGCCTGCCTCCCTCCCGCTGCGCCTA--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAGCCCTCATTGCGGCGGC-TGCTTTGTGGAAACC-CT----------GGGCTTTCCCTCTG-CCTTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31625 166 - 3732694 CCTG-CTCCGGCAACCAGTAGACACCAAGT-TCCATCTG-TCCTTGTCCAGCCCGCCTCTGTCCCGCTGCGCCTA--ATC----CTTTAACCCTTGAGAGCCAGGGCTGTGCCTTCAGGAAGCCCTCATTGCAGCGGC-TGCTTTGTGGAAACC-CT----------GGGCTTTCCCTCTGGCCTTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473288 150 - 608964 CCTGCTGGAAGCCACCAGTAG-----------------------CGTCCAGCCCACCTCCGT-CTGCCCTGCTTT--TTC----TTTCCACTCCTGAGCGCCAGGGCTTTTCCTTAAGCAAGCCCTCTTCATGGCA-T-TCCTTTGTGGAAATG-CTTGGCCAGAGGAGGCTTTGCTACCTGC---- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65468592 137 - 98207768 CCTGACAGAAGTCACAGAGTTACGC---------------TCCCTGTCTGGTCCACCTTTGT-CCTC---ACCTT--TCCAGAACTTTCACTCT--GGAGCCCAGGCTCTACC---AGGAAGGAC------------C-TCTTCTGTAGAAGCA-CT----------GAGCTTTCTATCTGACCCGG i mm10.chr16 C 0 I 1765 s canFam3.chr33 29109570 169 + 31377067 CTCAGCGGGAGCCGCTAGTCTCCACTGGGCTTCCATCAGCTCCCTGCCCAGCCCACGTCTGT-CCACCCTCCTTC--TGC----CTTTGACTTTTGACAGCCAGGGATTTTCTTCCAGGAAGTCCTTACTACTGCAGC-TTCTTCATGGAAACCACA----------GGGCTCCCCCGCCGGCCAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3944177 149 + 6579706 CCTGCCCAGAGCTACCAGTAGCCACC-AGTTTCCATTTG-CTCCT-TCCAG-CCATCTCTGT-CCTCCTCCCTTTCCTCC----CCTTCACTCTCCAGGGCCAGGGCTTCTCCTTAAGGAAAGCCTTACCACTGCAGC-TCCTTCCTGGGCACC-CT----------GGG----------------- i dasNov3.JH569502 I 38 C 0 a score=1062056.000000 s hg38.chr3_KI270779v1_alt 187086 101 + 205312 G-CTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCAAGTATAGGCAGGTCATCTGTAAACCCCT-TCA---GGGAG s panTro5.chr3 200173992 102 + 202621043 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCAAGTATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130750 102 + 190779 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCAAGTATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21320 101 - 189199 G-CTTCAGTGTGACCCAG-CCCGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCAAGTATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120935589 101 + 123690457 GGCTTCAGTGCGACCCAG-ACTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCGAATATAGGCAGGTCATCTGTAAGTCCC--TCA---GGGAG i nomLeu3.chr11 C 0 I 4997 s rheMac8.chr2 202514756 102 + 204787373 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGAAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120176 102 + 192460366 GGCTTCGGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606628 102 + 19675229 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAATCATAGTCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538840 102 + 16847902 GGCTTCAGTGTGACGCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCGAACATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469792 102 - 91754291 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653658 102 - 1977891 GGCTTCAGTGTGATGCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCA---GGGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515676 105 + 7796314 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTACAAACAGACCCTAGACTCACACATAGGCAGGTCATCTGTAAGCCCCC-TCATCTGTAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981421 79 - 74750902 GGCTTCGGTGTGACCCAG--------------CCTGCCAGCAAGTCTGCAAAGAGA---------CAAATACAGGGAGACCATCTGCCAG-CCCC-TCA---GGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 499934 99 + 17725628 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGCCTGCAAACAGATCCGAGACTTAAATACAGGGAGACCATCTGCCAG---CC-TCA---GGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 473238 102 - 6778120 GGCTTCAGTGTGACCCAG-CCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCGAGACTCAAATACAGGGAGATCATCTGCCAGCCCCC-TCA---GGGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31791 101 - 3732694 GGCTTCGGTGTGACCCAG-CCTGGGTGAGGGCTCTGCCAGCAAGTGTGCAAACAGACCCGAGACTCAAATACAGGGAGATCATCTGCCAG-CCCC-TCA---GGGAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473438 97 - 608964 ----TTAGTGTGATCCAGGCCTGGGTGAGGGTCCTGCCAGCAAGTGTGGAAACAGGCTCTAGATTCAAACATAGGCAGGTCATCTCTAG--CCCC-TCA---AGGAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29109739 71 + 31377067 ------CACACGGCTGGG-CCTGGACCA-CGCACTGGCAGCAGGGCCGGAAAC-------------------AGGCAGGTC--------GGGCCC-TCGGCTGGGGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3944326 101 + 6579706 -GCACAGGAGGCTCTGAC-ACTTGGGGAGGGTCCTCCCAGCAAGGGCGGAAAAAGACTCTAAAGTCAAATACAGGCAGGTCA-CAGTCAGCCCCCATCA---AGGAG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I a score=985492.000000 s hg38.chr3_KI270779v1_alt 187187 125 + 205312 CCAAAAGGAACGGGGCTGGC---TGGCTGCCAGT------------------------------------CCTCCAGCAGCTGCCCTGT--GGGG-GTGGGGGCTGCCCACCCGCCCTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTCATGCCCGGTCAGATGTG s panTro5.chr3 200174094 125 + 202621043 CCAAAAGGAACGGGGCTGGC---TGGCTGCCAGT------------------------------------CCTCCAGCAGCTGCCCTGT--GGGG-GTGGGGGCTGCCCGCCCGCCCTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTCATGCCTGGTCAGATGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130852 125 + 190779 CCAAAAGGAACGGGGCTGGC---TGGCTGCCAGT------------------------------------CCTCCAGCAGCTGCCCTGT--GGGG-GTGGGGGCTGCCCGCCCGCCCTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTCATGCCTGGTCAGATGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21421 125 - 189199 CCAAAAGGAACGGGGCTGGC---TGGCTGCCAGT------------------------------------CCTCCAGCAGCTGCCCTGT--GGGG-GTGGGGGCTGCCCGCCCGCCCTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTCACGCCTGGTCAGATGTG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202514858 124 + 204787373 CCAAAAGGAATGGGGCTAGC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GGG-GTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120278 124 + 192460366 CCAAAAGGAATGCGGCTGGC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GGG-GTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606730 124 + 19675229 CCAAAAGGAATGGGGTTGGC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GGG-GTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 538942 124 + 16847902 CCAAAAGGAATGGGGCTGGC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GGG-GTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 469894 124 - 91754291 CCAAAAGGAATGGGGCTGGC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GGG-GTGGGGGCCGCCTGCCCACTGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653760 124 - 1977891 CCAAAAGGAATGGGGCTGAC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GGG-GTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515781 124 + 7796314 CGAAAAGGAATGGGGCTGGC---TGGCTGCCAGT------------------------------------GCCCCAGCAGCTGCCCTGT---GCA-GTGGGGGCCGCCTGCCTACCGTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGATAATGCCCAGTCAGATGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981500 122 - 74750902 TCAAAAGTGCAGGGGCTGGT----GGCTGCCCAT-------------------------------------CCCCAGAAGCTGCCCTGA---GGC-GTGGAGGCTGCCTGTTGGCCCTTGGTGACTGCTT-TT-CCTGCCAATGCTCTGGTAATGCCCCGTCAGATGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 500033 159 + 17725628 CCAGACGTGACGGGGCCGGC----GGCTGCCCGTCTACAGAAGCTGCCTTGAGGGGTGGGGGCTGCCGATCCCCTAGAAGCTGCCCTGA---GGG-GTGGGGGCTGCCCGTCCACCCTTGGTGACTGCTT-TT-CCTGCCAAGGACCTGGTAATGCCCCGTCAGATGTA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 473340 124 - 6778120 CCAAACGTGATGGGGCTGGC----GGCTGCCCAT------------------------------------CCCCCAGAAGCTGCCCTGA---GGGAGTGGGGGCTGCCCGCCCGCCCTTGGTGACTGCTT-TT-CCTGCCAAGGCCCTGGTAATGCCCCATCAGATGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 31892 123 - 3732694 CCAAAAGTGATGGGGCTGGC----GGCTGCCCGT------------------------------------CCCCCAGAAGCTGCCCTGA---GGGGGTGGGGGCTGCCTGCCAGCCCTTGGTGACAGTTT-TT-CCTGCCAAGGCCCTGGTAATGCCCC-TCAGATGTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473535 78 - 608964 CCAAAAGGAACAGGACTGAC---CTGCTTCTAGT------------------------------------CCCCTAGAAGTTGCCCTG----GGC-TTG---------TCCCCACCA---------GCTC-TT-CCTCATAA--------------------------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29109810 121 + 31377067 ----TGGGAATGGGCCTGAC---CTGTCTCCTCT------------------------------------TGCCCAGAAGCTCCCTGGG---ACC-CGGGGGGCTAGGTAGTGTCCTGCGGAGACTGTTTCCT-CCCTCCCATGTCCCCCAAATGCTCAGTCACGTGCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3944427 130 + 6579706 -GCAAGGGGGCAGAACTGTCAAGCGGGAGCTCGT------------------------------------TGGCAGGGGGAAGAGTGGGGCGGGG-AGGGGAGGAGGAACCCACCCCTCTGTGACTGCTT-TTCCCCATCAAGGTCCTCTGGATGCCTGTTCCAATCTG i dasNov3.JH569502 C 0 I 755 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=46458.000000 s hg38.chr3_KI270779v1_alt 187312 5 + 205312 TGGGT s panTro5.chr3 200174219 5 + 202621043 TGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130977 5 + 190779 TGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21546 5 - 189199 TGGGT i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202514982 5 + 204787373 TGGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120402 5 + 192460366 TGGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606854 5 + 19675229 TGGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539066 5 + 16847902 TGGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470018 5 - 91754291 TGGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653884 5 - 1977891 TGGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515905 5 + 7796314 TGGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981622 5 - 74750902 TAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 500192 5 + 17725628 TAGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 473464 5 - 6778120 TAGGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 32015 5 - 3732694 TAGGT i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29109931 5 + 31377067 TGGGG i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 473613 0 - 608964 C e mm10.chr16 65468729 1765 - 98207768 I e dasNov3.JH569502 3944557 755 + 6579706 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=1788957.000000 s hg38.chr3_KI270779v1_alt 187317 223 + 205312 GCCATCTCCCAGCCACGACCATCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AGCGACGCAAAGGACTCAGCGCTCCACGACATGCCT--AGCTTCTTCGGGTCGTCATGGAGACGCCCTTGCACACCAACAGTC-------CTTCACTCCTTCTCCGGGTCACGCC--------------CCCGTGCTTTTCC-----AC--GCCCACCCCAGGTCTTGCCCCTCTGCGCTCCTCTCCACAGACCCCA s panTro5.chr3 200174224 223 + 202621043 GCCATCTCCCAGCCACGACCATCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AGCGACGCAAAGGACTCAGCGCTCCAGGACATGCCT--AGCTTCTTCCGGTCGTCACGGAGACGCCCTTGCACACCAACAGTC-------CTTCACTCCTTCTCCGGGTCACGCC--------------CCCGTGCTTTTCC-----AC--ACCCACTCCAGGTCTTGCCCCTCTGCGCTCCTCTCCACAGACCCCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 130982 223 + 190779 GCCATCTCCCAGCCACGACCATCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AGCGACGCAAAGGACTCAGCGCTCCAGGACATGCCT--AGCTTCTTCCGGTCGTCACGGAGACGCCCTTGCACACCAACAGTC-------CTTCACTCCTTCTCCGGGTCACGTC--------------CCCGTGCTTTTCC-----AC--ACCCACTCCAGGTCTTGCCCCTCTGCGCTCCTCTCCACAGACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21551 223 - 189199 GCCATCTCCCAGCCACGGCCATCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AGCGACGCAAAGGACTCAGCGCTCCGGGACATGCCT--AGCTTCTTCGGGTCGTCACGGAGACGCCCTTGCACACCAACAGTC-------CTTCACTCCTTCTCCGGGTCATGCC--------------TCCGTGCTTTTCC-----AC--GCCCACCCCAGGTCTTGCCCCTCTGCGCTCCTCTCCACAGACCCCA i gorGor5.CYUI01000254v1 C 0 I 120 s rheMac8.chr2 202514987 222 + 204787373 GCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGC-----------TCCTCTTGGTCCCCTT-AACGACGCAAAGGACCCAGCGCTCCAGGGCATGCCG--AGCTTCTTCGGGTCGCCGTGGAGATGCCTTTGCACACCAGCCGTC-------CTCCACTCCCTCTCGGGGTCATGCC---------------CCGTGCTTTTCC-----AC--GCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120407 222 + 192460366 GCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGC-----------TCCTCTTGGTCCCCTT-AACGACGCAAAGGACCCAGCGCTCCAGGGCATGCCG--AGCTTCTTCGGGTCGCCGTGGAGATGCCTTTGCACACCAGCCGTC-------CTCCACTCCCTCTCGGGGTCATGCC---------------CCGTGCTTTTCC-----AC--GCCCACCCCGGGTCTTGCCCCTCTGGACTCTTCTCTACAGACCCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 606859 221 + 19675229 GCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGC-----------TCCTCTTGGTCTCCTT-AACGACGCAAAGGACCCAGCGCTCCAGGGCATGCCG--AGCTTCTTCGGGTCGCCGTGGAGATGCCTTTGCACACCAGCCATC-------CTCCACTCCCTCTCGGGGTCATGCC---------------CCGTGCTTTTCC-----AC--GCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGA-CCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539071 208 + 16847902 GCCATCTCCCGGCCACTGTCACCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AACGACGCAAAGGACCCAGCGCTCCAGGGCATGCCT--AGCCTCTTCGGGTCGCCATGGAGATGCCTTTGCACACCAGCCGTC-------CTCCACTCCCTCTCGGGGTCATGGC---------------CCGTGCTTTTCC-----AC--GCCCACCCCGGGTCTTGCCCCTCTGGAC--------------CCCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470023 222 - 91754291 GCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGC-----------TCCCCTTGGTCCCCTT-AACGACGCAAAGGACCCAGCGCTCCAGGGCATGCCT--AGCTTCTTCGGGTTGCCATGGAGATGCCTTTGCACACCAGCCGTC-------CTCCACTCCCTCTCGGGGTCATGCC---------------CCGTGCTTTTCC-----AC--GCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 653889 222 - 1977891 GCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AACGACGCAAAGGACCCAGCGCTCCAGGGCATGCCT--AGCCTCTTCGGGTCGCCATGGAGATGCCTTTGCACACCAGCCGTC-------CTCCACTCCCTCTCGGGGTCATGGC---------------CCGTGCTTTTCC-----AC--GCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 515910 222 + 7796314 GCCATCTCCCAGCCACTGCCACCTCCTCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-AAGGACGCAAAGGACTCAGCGCTCCAGGGCACGCCT--AGCTTCTTCGGGTCGCCACAGAGATGCCTTTGCACACCCACCGTC-------CTCCACTCCCTCTCCAGGTCATGCC---------------CCCTGCTTTTCC-----AC--GCCCACCCCAGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981627 205 - 74750902 GCCACCTTCCAGCCAC-ACCACCTCTGCTCCTGGACCAGC-----------TCCACTTGGTCCCCTT-A---ACTCGAAGGGCTCCGCACTCCAGGGTGTGCCTATAGCTTCTTCGGGTTGTCACGGAGATGCCCTTCCACATTTAGAGTC-------CTTCACTCCTTCTCCAGGTCTTACC-------------------------------------CCTACCCCAGGACTTGTCCCTCTGGGCTTCTCGTGACAGACCCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 500197 231 + 17725628 GCCACCTCCCAGCCAC-ACCACCTCCGCCCCTGGCCCAGC-----------TCCACTTGGGCCCCTT-A---ACGCGAAGGACTCCGCACTCCGGGGCCTGCCTGTAGCTTCTTCGGGTTGTCACGGAGATGCCCTTGCACATTTAGAGTC-------CTTCACACCTTCTCCAGGTCATACCCCCT---TCCCCGCCCTGTGC-TTTCC-----AC--ACCCACCCCAGGACTTGCCCCTCTGGGCTCCTAGCTGCAGACCCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 473469 226 - 6778120 GCCATCTCCCAGCCAC-ACCACCTTCGCTCCTGGCCCAGC-----------TCCACTTGGTCCCCTT-A---ATGCGAAGGACTCCGCACTCCGGGGTGTGCCTGCAGCTTCTTCGGGTTGTCACGGAGATGCCCTTGCACATTTAGAGTC-------CTGCACTCCTTCTCCAGGTCATACC--------CCTGCCCCCGTGC-TTTCC-----AC--GCCCACCCCAGGACTTGCCCCTCTGggctccttgctacagaccctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 32020 226 - 3732694 GCCATCTCCCAGCCAC-ACCACCTCCGCTCCCAGCCCAGC-----------TCCACTTGGTCCCCTT-A---ACGCGAAGGACTCCGCACTCCAGGGCGTGCCTATAGCGTCTTCGGGTTGTCACGGAGACGCCCTTGCACATTTAGAGCC-------CTTCACTCCTTCCCCAGGTCAGACC--------CCCAACCCAGTGC-TTTCC-----AC--GCCCACCCCAGGCCTTACCCCTCTGGGCTCCTCGCTGCAGACCCTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473613 189 - 608964 ---------CAGCTGTTCCCACCTCCCTT----------------------------------CCTC-AATAATGCACAGGATCCTGTGCTCTGGAGTATGCCT--ACAGCTCTTAGGGCATTGTGGGGACACCCTTGCTTATT----GTC-------CTTTAGTGTTTCATTAAGCCACACC--------------CCCATGCCCACCT-----ACTGGTGCCCCCCAGTTCTTGCCCTTTTGGGCTGTTCTCTGCAGACCCTG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29109936 219 + 31377067 CAGCACTTCCCCCCAC-GCCCCCGTCCTCCCAGGTCCGGC-----------TCCGTCTTGTCCCCTC-AACAGTGCACAGGCCCCAGCAC-CCAGGCCGTCCCTGTGCCTCTTCCAGGTCCTCA-------GCTTC---------ATGGTC-------CTTTACTCCTTCTCTTGCGCATGCCCTGTGGCCCCCGGGGCTGTTCCTGCCC-----AC--CCCAACCCCAGTTCCTG-CTCTCTGGGCTTTTCTCCACAAACTCC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3945312 255 + 6579706 GCCATCTCCCAACCCACCCCATGTCTTCTCCCGTCCCCTCCCCCACACCTTTCCATTTCGTTCCCTTCAACAGTGCACGG---TTGGAGCCCCAGGACATCTCTGCACTTCTTCAGGGTCATCGTGGGGACCCCCTGCCACACTGACTGCCCTTCATTCTTCACTCCTTCTC-AGGTCATATC---CCATCACCCCCATCTTGCTTTCCCTGCTACC--TCCCACCCCAGTTCTTCCTCCTTCAGGCTCCCCTCTACACATCTG- i dasNov3.JH569502 I 755 C 0 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=1042321.000000 s hg38.chr3_KI270779v1_alt 187540 113 + 205312 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGTCCAGCTGGTACCCAGCACATTTGGGCTCAGCTTTAAATCAC-AG-ATTTGGAAAC-TCAA-GAACTTGGGCGTCAGGAGGTCCAACCGT s panTro5.chr3 200174447 113 + 202621043 CTTCCTGGCTC--------------------CACGTGGAGCTGAGTGTCCAGCTGGTACCCAGCACATTTGGGCTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTGGGCGTCAGGAGGTCCAGCCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131205 113 + 190779 CTTCCTGGCTC--------------------CACGTGGAGCTGAGTGTCCAGCTGGTACCCAGCACATTTGGGCTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTGGGCGTCAGGAGGTCCAGCCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 21894 113 - 189199 CTTCCTGGCTC--------------------CACGTGGAGCTGAGTGTCCAGCTGGTACCCAGCACATTTGGGCTCAGCTTTAAATCAC-AG-ATTTTGAAAC-CCAA-GAACTTGGGCGTCAGGAGGTCCAGCCGT i gorGor5.CYUI01000254v1 I 120 C 0 s rheMac8.chr2 202515209 112 + 204787373 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCATCAGGAGGTCAAGCCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120629 112 + 192460366 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGCGGTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCATCAGGAGGTCAAGCCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607080 112 + 19675229 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGCCTAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCATCAGGAGGTCAAGCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539279 112 + 16847902 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGCCCAGCTGGTACCTATC-CATTTGTGGTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCGTCAGGAGGTCAAGCCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470245 112 - 91754291 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTAAATCGC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCGTCAGGAGGTCAAGCCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654111 112 - 1977891 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCATCAGGAGGTCAAGTCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516132 113 + 7796314 CTTCCTGGCTC--------------------CACATGGAGCTGAGTGTTCAGCTGGTACCTAACACATTTGTGGTCAGCTTTAAATCAC-AG-ATTTTGAAAC-TCAA-GAACTTAGGCGTCAGGAGGTCAAGCCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 981832 133 - 74750902 CTGCCTGGCCCCTGTGGAGTTTGATGACCCTCACATGGGGCTGAGTGTCCAGCTGGCACCTAACACATTTGGAGTCAGCTTAAAATCAC-AG-ATTCTGAAAC-TCAA-GAACGTAGGGGTCAGGAGGTCAACCCAT i calJac3.chr17 C 0 I 311 s saiBol1.JH378146 500428 133 + 17725628 CTGCCTGGCTCCTGCGGAGTTTGATGACCCTCACATGGGGCTGAGTGTCCAGCTGGCACCTAACACATTTGGGGTCAGCTTGAAATCAC-GG-ATTCTGAAAC-TCAA-AAACGTAGGAGTCAGGAGGTCAAGCCAT i saiBol1.JH378146 C 0 I 307 s cebCap1.NW_016107444v1 473695 133 - 6778120 ctgcctggctcctgTGGAGTTTGATGACCCCCACATGGGGCTGAGTGTCCAACTGGCACCTAACACATTTGGGGTCAGCTTGAAATCAC-AG-ATTCTGAAAC-TCAA-GAACGCAGGTGTCAGGAGGTCAAGCCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 32246 133 - 3732694 CTGCCCGGCTCCTGTGGAGTTTGATGACCCTCACATGGGGCTGAGTGTCCAGCTGGCACCTAACACATTTGGGGTCAGCTAGAAATCAC-AG-ATTCTGAAAC-TCAA-GAACGTAGGGGTCAGGAGGTCAAGCCAT i aotNan1.NW_018507959v1 C 0 I 310 s otoGar3.GL873829 473802 126 - 608964 TGTCTTGGCTT-CTCCAAGTTAGGTGACCCAAACATGGGACCAGTTGTCGAACTGGTCCCTAGCACTTTTTAGGCTCACTCTAAATCAC-AA-GTTTT----C-TTAA-AAGCTTCAGAGTCA--AGGTCATggcat i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29110155 131 + 31377067 ----CTGGCTCCTCTTGTTCAAGAGACTCCTGAGGCAAGGCTAAGTGCAGAGCTGGGGCTGAACACTTTTTCTGTTGACTTCACatcccaag-atagcaaaactttaa-gaactcgggaatccagaggttatgccac i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3945567 134 + 6579706 CTTCCCAGCTCCTTTTGAGCTAGATGACCC-TACCTGGGGCTGAGTGTGGGGTGGGTAACTAAGACTTTTGGGGTTGACTTTAaatcac-agaatgtcaaaac-ttaaggaacttcaagaccaggaggtcatgccat i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=65597.000000 s hg38.chr3_KI270779v1_alt 187653 5 + 205312 TCACC s panTro5.chr3 200174560 5 + 202621043 TCACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131318 5 + 190779 TCACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22007 5 - 189199 TCACC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202515321 5 + 204787373 TCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120741 5 + 192460366 TCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607192 5 + 19675229 TCACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539391 5 + 16847902 TCACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470357 5 - 91754291 TCACC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654223 5 - 1977891 TCACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516245 5 + 7796314 TCACC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982276 5 - 74750902 TCACC i calJac3.chr17 I 311 C 0 s saiBol1.JH378146 500868 5 + 17725628 TCACC i saiBol1.JH378146 I 307 C 0 s cebCap1.NW_016107444v1 473828 5 - 6778120 TCACT i cebCap1.NW_016107444v1 C 0 I 303 s aotNan1.NW_018507959v1 32689 5 - 3732694 TCACC i aotNan1.NW_018507959v1 I 310 C 0 s otoGar3.GL873829 473928 5 - 608964 tcatc i otoGar3.GL873829 C 0 I 2 s canFam3.chr33 29110286 5 + 31377067 tcatc i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3945701 5 + 6579706 tcatc i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=1335180.000000 s hg38.chr3_KI270779v1_alt 187658 142 + 205312 ---ACTGC-TTTTTACACAGGGGAC-CGGGGCCCTGGGGAGACACGGGGC---AGGG-CCTGGTCACAGGGGCCAGAACAGTT-----CACGGCAA--AGACTTGGCCCTGGGGCTCCTAAATCCAAGC---TGCC---TCCCCGGCGCCCCAAGCCCCAGCCT- s panTro5.chr3 200174565 142 + 202621043 ---ACTGC-CTTTTACACAGGGGAC-CGGGGCCCTGGGGAGACACGGGGC---AGGG-CCTGGTCACAGGGGCCAGAACAGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATCCAAGC---TGCC---TCCCCGGCGCCCCAAGCCCCAGCCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131323 142 + 190779 ---ACTGC-CTTTTACACAGGGGAC-CGGGGCCCTGGGGAGACACGGGGC---AGGG-CCTGGTCACAGGGGCCAGAACAGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATCCAAGC---TGCC---TCCCCGGCGCCCCAAGCCCCAGCCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22012 143 - 189199 ---ACTGC-TTTTTACACAGGGGAC-CGGGGCCCTGGGGAGACACGGGGC---GGGGCCCTGGTCACAGGGGCCAGAACAGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATCCCAGC---TGCC---TCCCCGGCACCCCAAGCCCCAGCCT- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202515326 142 + 204787373 ---ACGGC-TCTTTACACAGGGGAC-CAGGGCCCTGGGGAGACACGGGGC---GGGG-CCTGGTCACGGGGACCATAACGGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATGCGAGC---TGCC---TCCGTGCCACCCCAACCCCCAGCCT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120746 142 + 192460366 ---ACGGC-TCTTTACacaggggac-cggggccctggggagacacggggc---gggg-cctggtcacggggaccATAACGGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATGCGAGC---TGCC---TCCGTGCCACCCCAACCCCCAGCCT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607197 142 + 19675229 ---ACGGC-TCTTTACacaggggac-cggggccctggggagacacggggc---gggg-cctggtcacggggaccATAACGGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATGCGAGC---TGCC---TCCGTGCCACCCCAACCCCCAGCCT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539396 142 + 16847902 ---ACGGC-TCTTTACACAGGGGAC-CAGGGCCCTGGGGAGACACGGGGC---GGGG-CCTGGTCACGGGGACCATAACGGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATGCGAGC---TGCC---TCCCTGGCACCCCAACCCCCAGCCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470362 142 - 91754291 ---ACGGC-TCTTTACACAGGGGAC-CGGGGCCCTGGGGAGACACGGGGC---GGGG-CCTGGTCACGGGGACCATAACGGTT-----CATGGCAA--AGACTTGGCACTGGGGCTTCTAAATGCGAGC---TGCC---TCCCTGGCACCCCAACCCCCAGCCT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654228 142 - 1977891 ---ACGGC-TCTTTACACAGGGGAC-CGGGGCCCTTGGGAGACACGGGGC---GGGG-CCTGGTCACGGGGACCATAACGGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATGCGAGC---TGCC---TCCCTGGCACCCCAACCCCCAGCCT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516250 142 + 7796314 ---ATGGC-TCTTTACACAGGGGAC-CGGGGCCCTGGGGAGACACGGGGC---GGGG-CCTGGTCACAGGGACCATAACAGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATGCAAGC---TGCC---TCCCTGGCGCCCCAACCCCCAGCCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982281 142 - 74750902 ---ACTGC-TTTTTGCACAGGGGAC-CGGGGGCCTGGGGAGTCTCAGGGC---AGGG-CCTGGTCACAGGGGCCAGAACAGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTACATCCAAGC---CGCC---TGCCTGGTGCCCCAACCCCCAGCCT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 500873 143 + 17725628 ---ACTGCTTTTTTACACTGGGGAC-CAGGGGCCTGGGGAGTCTCAGGGC---AGGG-CCTGGTCACAGGGGCCAGAACAGTT-----CATGGCAA--GGACTTGGCACCGGGGCTCCTAAATCCAAGC---CGCC---TGCCTGGCACCCCAACCCCCAGCCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 474136 141 - 6778120 ---ACTGC-TTTTTACACCAGGGAC-TGGGGGCCTGGGGAGTCTCAGGGC---AGGG-CCTGGTCACAGGGGCCAGAACAGTT-----CACGGCAA--AGACTTGGCACCGGGGCTCCTAAATCCAAGC---CGCC---TGCCTGGTGCCCCAA-CCCCAGCCT- i cebCap1.NW_016107444v1 I 303 C 0 s aotNan1.NW_018507959v1 32694 142 - 3732694 ---ACTGC-TTTTTACACAGCGGAC-CAGGAGCCTGGGGAGTCTCAGGGC---AGGG-CCTGGTCACGGGGGCCAGAATAGTT-----CATGGCAA--AGACTTGGCACTGGGGCTCCTAAATCCAAGC---CACC---TGCCTGGCGTCCCAACCCCCAGCCT- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 473935 115 - 608964 ---cccac-tttttacttggggaaa-ctgggacctggagagact--ggtt---agga-tgtggtcacaggcaccaggacagtt-----agcagcaa--ggacctggccccagggctgctgacgccaaCC---TACC----------------------------- i otoGar3.GL873829 I 2 C 0 s canFam3.chr33 29110293 153 + 31377067 ---cctac-tttttatataggggaa-ccggagcctggagagagaggggaccagaggg-cccggacatagcaaccagatcagttagtggcacggcca--agtctgggccccaaggcccctaaatccaagt---taccatctccccattgcCTAAGGCCAATGCCT- i canFam3.chr33 I 2 I 26 s dasNov3.JH569502 3945706 150 + 6579706 gcccccat-gttttacagaagggaagctggggcccaaagggatata--ac---agga-ctcagacccagggaccagatccatg-----agtgacagccagcccaggccctagagctcctaaatcAAAGCACTTTCT---TCTACATCCCTCCATTTCCCTCCTCC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=343598.000000 s hg38.chr3_KI270779v1_alt 187800 47 + 205312 CGCTCTGGGAGTCATGATTCCCG-TGGAGA--CTCCTTCAACCACATCTG s panTro5.chr3 200174707 47 + 202621043 CGCTCTGGGAGTCATGATTCCCG-TGGAGA--CCCCTTCAACCACATCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131465 47 + 190779 CGCTCTGGGAGTCATGATTCCCG-TGGAGA--CCCCTTCAACCACATCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22155 47 - 189199 CGCTCTGGGAGTCATGATTCCCG-TGGAGA--CCCCTTCAACCACATCTG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202515468 45 + 204787373 CGCTCTGGGAGTCGCGATTCCCA-TGGAGA--CCCCTTCAACC--ATCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120888 45 + 192460366 CGCTCTGGGAGTCGCGATTCCCA-TGGAGA--CCCCTTCAACC--ATCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607339 45 + 19675229 CGCTCTGGGAGTCGCGATTCCCA-TGGAGA--CCCCTTCAACC--ATCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539538 45 + 16847902 CGCTCTGGGAGTCGCGATTCCCA-TGGAGA--CCCCTTCAACC--ATCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470504 45 - 91754291 CGCTCTGGGAGTCGCGATTCCCA-TGGAGA--CCCCTTCAACC--ATCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654370 45 - 1977891 CGCTCTGGGAGTCGCGATTCCCA-TGGAGA--CCCCTTCAACC--ATCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516392 47 + 7796314 CGCTCTGGGAGTCGCAATTCCCA-CGGAGA--CCCCTTCAACCATATCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982423 38 - 74750902 TGCTCTGGGAGCCGTGATTCCCA-TGGAGG--------AATCC--A-CTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501016 44 + 17725628 TCCTGTGGGAGCCGTGATTCCCA-TGGAGA--CCCCTTCATCC--A-CCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 474277 44 - 6778120 TGCTCTGGGAGCCTTGATTCCCA-TGGAGA--CCCCTTCATCC--A-CTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 32836 44 - 3732694 TGCTCTGGGAGCCATGATTCCCA-TGGAGA--CCCCTTCATCC--A-CTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474050 44 - 608964 --CTCTAGCAGAGTCGATTCCGA-TGGAAAGGCCTCTTCCAC---ACCCT i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3945856 37 + 6579706 CGCCCTGAGAGGCAAGACCCTCAGTGGTGG--GC-----------AACTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e canFam3.chr33 29110446 26 + 31377067 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=724286.000000 s hg38.chr3_KI270779v1_alt 187847 112 + 205312 CAGGGCAGGGCC--GTGTGGC-GGCTCCTTCCGGCCTCCACGTCCTCACGGTGGGATGAGCACTGGAGCGGGG---TTGTGTGGCCAGGGTGGGGTGGGGGTGCTGGAGGGTGGGGAG s panTro5.chr3 200174754 112 + 202621043 CAGGGCAGGGCC--GTGTGGC-GGCTCCTTCCGGCCTCCACGTCCTCACGGTGGGATGAGCACTCGAGCAGGG---TTGTGTGGCCAGGGTGGGGTGGCGGTGCTGGAGGGTAGGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131512 112 + 190779 CAGGGCAGGGCC--GTGTGGC-GGCTCCTTCCGGCCTCCACGTCCTCACGGTGGGATGAGCACTCGAGCAGGG---TTGTGTGGCCAGGGTGGGGTGGCGGTGCTGGAGGGTAGGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22202 112 - 189199 CAGGGCAGGGCC--GTGTGGC-GGCTCCTTCTGGCCTCCACATCCTCACGGTGGGATGAGCACTCGAGAAGGG---TTGTGTGGCCAGGGTGGGGTGGGGGTGCTGGAGGGTAGGGAG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202515513 98 + 204787373 CAGGGCGAGGCC--GTGTGGC-GGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATGAGCACTCAAGCGAGG---GTATGTGGCCGGGGTGGGGTGGGGGTGC-------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 120933 98 + 192460366 CAGGGCGAGGCC--GTGTGGC-GGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATGAGCACTCAAGCGAGG---GTATGTGGCCGGGGTGGGGTGGGGGTGC-------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607384 98 + 19675229 CAGGGCGAGGCC--GTGTGGC-GGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATGAGCACTCAAGCGAGG---GTATGTGGCCGGGGTGGGGTGGGGGTGC-------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539583 93 + 16847902 CAGGGCGAGGCC--GTGTGGC-GGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATGAGCACTCGAGTGAGG---GTATGTGGCC-----GGGGTGGGGGTGC-------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470549 98 - 91754291 CAGGGCGAGGCC--GTGTGGC-GGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGGTGAGCACTCGAGCGAGG---GTATGTGGCCGGGGTGGGGTGGGGGTGC-------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654415 98 - 1977891 CAGGGCGAGGCC--GTGTGGC-GGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATGAGCACTCGAGCGAGG---GTATGTGGCCGGGGTGGGGTGGGGGTGC-------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516439 98 + 7796314 CAGGGCAAGGCT--GTGTGGC-GGCTCCTTCTGGCCTCCGTGTCCTCACAGTGGGATGAGCACTCGAGCGAgg---gtgtgtggctggggtggggtgggggtgC-------------- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982461 103 - 74750902 CAGGGCAAGGGC--ATGTGGT-GGCTCCTTCTGGCCTCCACCTCCTCAGCATGTGGTGAGCATTCACTC-GGG---GCGTGTGGCTGGGGTGGGGTGGGGGTGCTGGAGG-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501060 95 + 17725628 CAGGGCGAGGGT--GTGTGGT-GGCTCCTTCTGGCCTCCACCTCCTCACCACGTGATGAGCATCCACTCGGGG---GCATGCGGCTGGGCTGGGGTGGGGG----------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 474321 111 - 6778120 CAGGGCAAGGGC--GTGTGGT-GGCTCCTTCTGGCCTCCACCTCCTCACCATGTGATGAGCATTCACTC-GGG---GTGTGCGGCTGGGGCGGGGTGGGGGTGCTGGAGGGTGGGGAG i cebCap1.NW_016107444v1 C 0 I 61 s aotNan1.NW_018507959v1 32880 111 - 3732694 CAGGGCAAGGGC--ATGTGGT-GGCTCCGTCTGGCCTCCACCTCCTCACCATGTGATGAGCGCTCACTTGGgg---gcgtgtggctggggtggggtgggggtgctggagggTAGGGA- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474094 97 - 608964 CAGGACAAGCCCCTGGGTAGCGGGCCCCTTCCAGCCTTC-TTCACTCACTGAGTGCTAAGT----------GG---GTGTGGGG--AGTGCAGGGTGGCAAGGCTGCAGGGTG----- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29110472 93 + 31377067 CACCGCAGGCCC-----TGGA-GCCTCCTTCTGGCCT-----TACTC---------TGAGCAGGCTGGCTAGGGACGAAGGGGGCC--TGTGCGGTGGAGG-GCTGGAGGGTCGGG-- i canFam3.chr33 I 26 C 0 s dasNov3.JH569502 3945893 74 + 6579706 ------CAGGCT--CCACAGC---CCCCTTCTGGCCT--GTTACCCCACCCTGTGAAGAGT----------GA---GCGTGTGGTGGGAATGCTGCAGGG------------------ i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=262655.000000 s hg38.chr3_KI270779v1_alt 187959 72 + 205312 GTGTAGGGAGGTGGTGGCAGTTTCCTTTGCCCTCAGCCTAGTCC-TGAAACATCCCG----AGGTGGAAGGGTCCGC s panTro5.chr3 200174866 72 + 202621043 GTGTAGGGAGGTGGTGGCAGTTTCCTTTGCCCTCAGCCTAGTCC-TGAAACATTCCG----AGGTGGAAGGGTCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131624 72 + 190779 GTGTAGGGAGGTGGTGGCAGTTTCCTTTGCCCTCAGCCTAGTCC-TGAAACATTCCG----AGGTGGAAGGGTCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22314 72 - 189199 GTGTAGGGAGGTGGTGGCAGTTTCCTTTGCCCTCAGCCTGGTCC-TGAAACATTCCG----AGGTGGAAGGGTCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202515611 46 + 204787373 --------------------------TTGTCCTGAGCCAAGTCC-TGAAACATTTTG----AGATGGAATGTTCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121031 46 + 192460366 --------------------------TTGTCCTGAGCCAAGTCC-TGAAACATTTTG----AGATGGAATGTTCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607482 46 + 19675229 --------------------------TTGTCCTGAGTCAAGTCC-TGAAACATTTTG----AGATGGAATGTTCCAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539676 46 + 16847902 --------------------------TTGTCCAGAACCAAGTCC-TGAAACATTTTG----AGATGGAATGTTCCAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470647 46 - 91754291 --------------------------TTGTCCTGAGCCAAGTCC-TGAAACATTTTG----AGATGGAATGTTCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654513 46 - 1977891 --------------------------TTGTCCTGAGCCAAGTCC-TGAAACATTTTG----AGATGCAATGTTCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516537 46 + 7796314 --------------------------TTGTCCTGAGCCAAGTCC-TGAAACATTCTG----AGATGGAATGATCCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982564 69 - 74750902 --GTAGGGAGGTGGTGGTAGTTCCCTTTGAGCTCAGCCGAGTCC-TGGAAAACCTCA----AGGTGGAATGT-CCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501155 63 + 17725628 ---------GGTGGCGGTAGTTCCCTTTGCGCTTAGCCAAGTCC-TGAAGAACCTCA----AGGTGGAACGTCCCAT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 32991 49 - 3732694 --------AGGTGGTGGTAGTTCCCTTTGCGCTCAGCCAAGTCC--------------------TGGAATGTCCCAT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474191 58 - 608964 -----GGGAGGCTGTGGTTGTTTTCTTTGCTGTTAGCCAAGCCTTTAAAACATTTCA----AGGTGG---------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29110565 67 + 31377067 -------GAGGCCGTAGCTGTTTCACTTGCTCTCAGCCAAGCCC-TTATGCATTTCGAGGAAGGCAGGACACTCC-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3945967 72 + 6579706 --ATGGCGAGGTGGCGTTTGTTTCATTTGCTCTTGGTCAAGCTT-TTAAAAAGTTCAAGGAAGGTAGAATGTCAC-- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e cebCap1.NW_016107444v1 474432 61 - 6778120 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=556796.000000 s hg38.chr3_KI270779v1_alt 188031 71 + 205312 TTCACCAGCATGGCTTCTCTTGCAGCCT-TTAAACGGCACTCGCCTTCTGACTCACTCCCAGGAAGCTCCTC s panTro5.chr3 200174938 71 + 202621043 TTCACCAGCATGGTTTCTCTTGCAGCCT-TTAAACGGCATTCACCTTCTGACTCACTCCCAGGAAGCGCCTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131696 71 + 190779 TTCACCAGCATGGTTTCTCTTGCAGCCT-TTAAACGGCATTCACCTTCTGACTCACTCCCAGGAAGCGCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22386 71 - 189199 TTCACCAGCATGGTTTCTCTTGCAGCCT-TTAAACGGCATTCGCCTTCTGACTCACTCCCAGGAAGCTCCTC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202515657 71 + 204787373 TTCACCAGCCCGGTTTCTCTTGCAGCCT-TTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGTGCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121077 71 + 192460366 TTCACCAGCCCGGTTTCTCTTGCAGCCT-TTACAGGACATTCCCCTTCTGACCCACTCCCAAGAGGTGCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607528 71 + 19675229 TTCACCAGCCCGGTTTCTCTTGCAGCCT-TTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGTGCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539722 71 + 16847902 TTCACCAGCCCGGTTTCTCTTGCAGCCT-TTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGCGCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470693 71 - 91754291 TTCACCAGCCTGGTTTCTCTGGCAGCCT-TTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGCGCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654559 71 - 1977891 TTCACCAGCCCGGTTTCTCTTGCAGCCT-TTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGCGCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516583 71 + 7796314 TTCACCAGCCCGGTTTCTCTTGCAGCCT-TTACAGGGCGTTCCCCTTCTGACCCACTCCCAAGAGGCGCCTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982633 63 - 74750902 TTCAGCAGCGTT--------TGCGGCCG-TTACAGGGCATTCGCCTTCTGACTCACTCCCAAGGAACTCCGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501218 71 + 17725628 TTCACCAGCCTTGCTTCTCCTGCTGCCG-TCAAAGGGCATTCACCTTCTCACTCACTCCCAAGAAATTCCGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 474493 71 - 6778120 TTCACCAGCATGGCTTCTCTTGCAGCCG-TCACAGGGCATTCGCCTTCTCCCTCCCTCCCAAGAAACACCGC i cebCap1.NW_016107444v1 I 61 C 0 s aotNan1.NW_018507959v1 33040 71 - 3732694 TTCACCAGCACTGCTTCTCCTGCAGCCG-TTAAAGGGCATTCGCCTTCTGACCCACGCCCAAGAAACTCCGC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474249 51 - 608964 -----CAGAACAGTCCCTTTCACTGTGT-GAGAAGTGTGCTCCTC------CCCACCCTTGGG--------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29110632 63 + 31377067 TGCACCAGCACTGCGTCTCCTACCAGC--TGGAAGAGCATATTCCTTCCGACCCTCTCCCGAGAA------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946039 60 + 6579706 TTCACGAGCATTGTGTCTCCTACTACCTGTGAAAGGATGGGCTCATTCTGACCCATTCCC------------ i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e nomLeu3.chr11 120935690 4997 + 123690457 I a score=88458.000000 s hg38.chr3_KI270779v1_alt 188102 11 + 205312 AAATATGCGCC s panTro5.chr3 200175009 11 + 202621043 AAAAATGCGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131767 11 + 190779 AAAAATGCGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22457 11 - 189199 AAAAATGCGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940687 11 + 123690457 aaaTATTCGCC i nomLeu3.chr11 I 4997 C 0 s rheMac8.chr2 202515728 11 + 204787373 GAAAATGCGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121148 11 + 192460366 GAAAATGCGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607599 11 + 19675229 GAAAATGCGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539793 11 + 16847902 GAAAATGCGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470764 11 - 91754291 GAAAATGCGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654630 11 - 1977891 GAAAATGCGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516654 11 + 7796314 GAAAATGCGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982696 11 - 74750902 AAAGATGCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501289 11 + 17725628 AAAGATGCTcc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 474564 11 - 6778120 AAAGATGCTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 33111 11 - 3732694 AAAGATGCTCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474300 5 - 608964 -----TGAGC- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29110695 7 + 31377067 ----AGGAGCC i canFam3.chr33 C 0 I 2 e mm10.chr16 65468729 1765 - 98207768 I e dasNov3.JH569502 3946099 0 + 6579706 C a score=119387.000000 s hg38.chr3_KI270779v1_alt 188113 15 + 205312 CAAGAAATATTTTCC s panTro5.chr3 200175020 15 + 202621043 CAAGAAATATTTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131778 15 + 190779 CAAGAAATATTTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22468 15 - 189199 CAAGAAATATTTTCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940698 15 + 123690457 CAAGAAATATTTTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515739 15 + 204787373 CAAGAACCACTTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121159 15 + 192460366 CAAGAACCACTTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607610 15 + 19675229 CAAGAACCACTTTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539804 15 + 16847902 CAAGAACCACTTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470775 15 - 91754291 CAAGAACCACTTTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654641 15 - 1977891 CAAGAACCACTTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516665 15 + 7796314 CAAGAACCACTTTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982707 15 - 74750902 CAAGAACTGCTTTCC i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 474575 15 - 6778120 CAAGAAATACTTTCC i cebCap1.NW_016107444v1 C 0 I 57 s aotNan1.NW_018507959v1 33122 15 - 3732694 CAAGAAATACTTTCC i aotNan1.NW_018507959v1 C 0 I 56 s canFam3.chr33 29110704 15 + 31377067 TGGGTGAAGGCTTCC i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3946099 8 + 6579706 CAAGAAAC------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 474305 0 - 608964 C e mm10.chr16 65468729 1765 - 98207768 I e saiBol1.JH378146 501300 0 + 17725628 C a score=57868.000000 s hg38.chr3_KI270779v1_alt 188128 17 + 205312 CTCGGCGACTG--TTCTTA s panTro5.chr3 200175035 17 + 202621043 CTCGGCGAATG--TTCCTA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131793 17 + 190779 CTCGGCGAATG--TTCCTA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22483 17 - 189199 CTCGGCGACTG--TTCCTA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940713 17 + 123690457 CTTGGCGAATG--TTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515754 17 + 204787373 TTTGGTGGATG--TTTCCG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121174 17 + 192460366 TTCGGTGGATG--TTTCCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607625 17 + 19675229 TTCGGTGGATG--TTTCCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539819 17 + 16847902 TTCGGTGGATG--TTTCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470790 17 - 91754291 TTCAGTGGATG--TTTCCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654656 17 - 1977891 TTCGGTGGATG--TTTCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516680 17 + 7796314 TTCGGTGGATG--TTTCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982722 19 - 74750902 TTCAACGAAAGGCTTCCCA i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 474305 10 - 608964 -------ACTT--TCCCAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29110719 11 + 31377067 --CCAGGCCCG--TC---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946107 13 + 6579706 ----GAGAGCG--TCCGCA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e aotNan1.NW_018507959v1 33137 56 - 3732694 I e cebCap1.NW_016107444v1 474590 57 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=220177.000000 s hg38.chr3_KI270779v1_alt 188145 35 + 205312 -GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCTA s panTro5.chr3 200175052 35 + 202621043 -GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131810 35 + 190779 -GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22500 35 - 189199 -GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCTA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940730 35 + 123690457 -GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515771 33 + 204787373 -GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121191 33 + 192460366 -GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607642 33 + 19675229 -GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539836 33 + 16847902 -GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470807 33 - 91754291 -GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654673 33 - 1977891 -GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGA i manLeu1.NW_012102020v1 C 0 I 60 s colAng1.NW_012118932v1 516697 33 + 7796314 -GCCTGCG--GAGGCAGGGCAGGAGCTGAGACTCGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982741 16 - 74750902 -TCCGGCT-------------------GAGACTTAA i calJac3.chr17 C 0 I 9 s otoGar3.GL873829 474315 33 - 608964 -GCCAGCT--GAGGGAGAGAAGGAGCTGTACTTCTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65470494 33 - 98207768 -GCTTGTT--GAGATTCTAGAGGGGCTCTCACTCTG i mm10.chr16 I 1765 C 0 s canFam3.chr33 29110730 26 + 31377067 ----------GAGGAGGGGAACGAGCTGCCATTATT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946120 34 + 6579706 GACCTGCT--GGGGTGGGGAGGGGGCTGTGATCCTA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 33137 56 - 3732694 I e cebCap1.NW_016107444v1 474590 57 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=64891.000000 s hg38.chr3_KI270779v1_alt 188180 14 + 205312 ACCCCAGCTTGAAC s panTro5.chr3 200175087 14 + 202621043 ACCCCAGCTTGAAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131845 14 + 190779 ACCCCAGCTTGAAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22535 14 - 189199 ACCCCAGCTTGAAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940765 14 + 123690457 ACCCCAGCCTGAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515804 14 + 204787373 ACTCTGGCTTCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121224 14 + 192460366 ACTCTGGCTTCAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607675 14 + 19675229 ACTCTGGCTTCAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539869 14 + 16847902 ACTCTGGCTTCAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470840 14 - 91754291 ACTCTGGCTTCGAC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 516730 14 + 7796314 ACTCTGGCTTCAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982766 11 - 74750902 CCTCACGCTCT--- i calJac3.chr17 I 9 C 0 s otoGar3.GL873829 474348 14 - 608964 ACTTTGCCCTGCAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65470527 14 - 98207768 ACTTTGGTCTGGGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29110756 14 + 31377067 TCTTTGATTTGGGC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946154 14 + 6579706 GCTTCGGTTTGGGC i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 33137 56 - 3732694 I e cebCap1.NW_016107444v1 474590 57 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C e manLeu1.NW_012102020v1 654706 60 - 1977891 I a score=10424.000000 s hg38.chr3_KI270779v1_alt 188194 1 + 205312 T s panTro5.chr3 200175101 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131859 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22549 1 - 189199 T i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940779 1 + 123690457 T i nomLeu3.chr11 C 0 I 19 s rheMac8.chr2 202515818 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121238 1 + 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607689 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 539883 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 470854 1 - 91754291 T i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 516744 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982777 1 - 74750902 C i calJac3.chr17 C 0 C 0 s aotNan1.NW_018507959v1 33193 1 - 3732694 T i aotNan1.NW_018507959v1 I 56 C 0 s otoGar3.GL873829 474362 1 - 608964 T i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65470541 1 - 98207768 T i mm10.chr16 C 0 C 0 s canFam3.chr33 29110770 1 + 31377067 T i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946168 1 + 6579706 T i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 474590 57 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C e manLeu1.NW_012102020v1 654706 60 - 1977891 I a score=13073.000000 s hg38.chr3_KI270779v1_alt 188195 1 + 205312 C s panTro5.chr3 200175102 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131860 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22550 1 - 189199 C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940799 1 + 123690457 C i nomLeu3.chr11 I 19 C 0 s rheMac8.chr2 202515819 1 + 204787373 C i rheMac8.chr2 C 0 I 19 s macFas5.chr2 121239 1 + 192460366 C i macFas5.chr2 C 0 I 19 s macNem1.NW_012014355v1 607690 1 + 19675229 C i macNem1.NW_012014355v1 C 0 I 19 s cerAty1.NW_012004056v1 539884 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 I 19 s chlSab2.chr15 470855 1 - 91754291 C i chlSab2.chr15 C 0 I 19 s colAng1.NW_012118932v1 516745 1 + 7796314 C i colAng1.NW_012118932v1 C 0 I 19 s calJac3.chr17 982778 1 - 74750902 C i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 474647 1 - 6778120 C i cebCap1.NW_016107444v1 I 57 C 0 s aotNan1.NW_018507959v1 33194 1 - 3732694 C i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474363 1 - 608964 C i otoGar3.GL873829 C 0 I 19 s mm10.chr16 65470542 1 - 98207768 C i mm10.chr16 C 0 I 1 s canFam3.chr33 29110771 1 + 31377067 T i canFam3.chr33 C 0 I 18 s dasNov3.JH569502 3946169 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e saiBol1.JH378146 501300 0 + 17725628 C e manLeu1.NW_012102020v1 654706 60 - 1977891 I a score=1274572.000000 s hg38.chr3_KI270779v1_alt 188196 136 + 205312 -------------------------------------TGGACCCCAGACTCT-CCCCCAAAGACTCAGACACCCAGAAACACAGAATAAAACTTGGTCCTGAAGCCAGAGGGACAGCCTGGAAAGTGTGGGGAAGAGGAC--GGGGGCCC--CCGAGGGAAC-ATCTCCCACAGGCCTG s panTro5.chr3 200175103 136 + 202621043 -------------------------------------TGGACCCCAGACTCT-CCCCCAAAGACTCAGACACCCAGAAACACAGAATAAAACTTGGTCCTGAAGCCAGAGGGACAGCCTGGAAAGTGTGGGGAAGAGGAC--AGGGGCCT--CCAAGGGAAC-ATCTCCCACAGGCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131861 136 + 190779 -------------------------------------TGGACCCCAGACTCT-CCCCCAAAGACTCAGACACCCAGAAACACAGAATAAAACTTGGTCCTGAAGCCAGAGGGACAGCCTGGAAAGTGTGGGGAAGAGGAC--GGGGGCCT--CCAAGGGAAC-ATCTCCCACAGGCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22551 136 - 189199 -------------------------------------TGGACCCCAGACTCT-CCCCCAAAGACTCAGACACCCAGAAACACAGAATAAAACTTGGTCCTGAAGCCAGAGGGACAGCCTGGAAAATGTGGGGAAGAGGAC--GGGGGCCC--CCAAGGGAAC-ATCTCCCACAGGCCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940800 136 + 123690457 -------------------------------------TGGACCCCAGACTCTCCCCCCAAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCTGAAGCCAGACGGACAGCCTGGAAAGTGTGAGGAAGAGGAC---GGGGCCC--CCGAGGGAAC-GTCTCCCACAGGCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515839 137 + 204787373 -------------------------------------TGGACCCCAGACGCT-CCCCCAAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i rheMac8.chr2 I 19 C 0 s macFas5.chr2 121259 137 + 192460366 -------------------------------------TGGACCCCAGACGCT-CCCCCGAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i macFas5.chr2 I 19 C 0 s macNem1.NW_012014355v1 607710 137 + 19675229 -------------------------------------TGGACCCCAGACGCT-CCCCCGAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i macNem1.NW_012014355v1 I 19 C 0 s cerAty1.NW_012004056v1 539904 137 + 16847902 -------------------------------------TGGACCCCAGACGCT-CCCCCAAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i cerAty1.NW_012004056v1 I 19 C 0 s chlSab2.chr15 470875 137 - 91754291 -------------------------------------TGGACCCCAGACGCT-CCCCCGAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i chlSab2.chr15 I 19 C 0 s manLeu1.NW_012102020v1 654766 137 - 1977891 -------------------------------------TGGACCCCAGACGCT-CCCCCAAAGACTCAGACACCCAGAAATACAGAATGAAAGTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i manLeu1.NW_012102020v1 I 60 C 0 s colAng1.NW_012118932v1 516765 137 + 7796314 -------------------------------------TGGACCCCAGACGCT-CCCCCAAAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCC--CGGAGGGAAC-GTCTCCCACAGGCCTG i colAng1.NW_012118932v1 I 19 C 0 s calJac3.chr17 982779 140 - 74750902 -------------------------------------TGGACCCCACACACTCCCCCAGAAGCCTCTGACACCCAGAAATACAGCAGGAAGCTTGATCCTGAAGCCAGAGGGACAGCCTGAGAAGTGCTGGGAGGAGGTCTGGGGGGCGC--CAGAGGGAAACGTCCCCCGCAGGCCCT i calJac3.chr17 C 0 C 0 s cebCap1.NW_016107444v1 474648 137 - 6778120 -------------------------------------TGGACCCCAGACACT-CCCCAGAAGACTCTGACACCCAGAAATACAGAAGGAAAC--GATCCTGAAGCCAGAGGGACAGCCTGAAAAGTGCTGGGAGGAGGTCTGGGGGGCCC--CAAAGGGAAACATCTCCCACAGGCCTG i cebCap1.NW_016107444v1 C 0 I 2388 s aotNan1.NW_018507959v1 33195 137 - 3732694 -------------------------------------TGGACCCCAGACACT-CCCCAGCAGGCTCTGACACTCAGAAATACAGAAGGAAACTTGATCCTGAAGCCAGAGGGGCAGCCTGAAAAGTGCTGGGAGGAGGTCT-GGGGGCCC--CAGAGGGAAA-GTCTCCCAAAGGCCCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 474383 89 - 608964 -------------------------------------TGGACCCAAGACCCT-------------------TCCAGAAATCCAGTCCAAAACCCAGCCCCGGA-------------------------CAGGAAAAGGACCAGGGAACCC--CAGATGGGAT-GTTCCCTTCA------ i otoGar3.GL873829 I 19 C 0 s mm10.chr16 65470544 133 - 98207768 -------------------------------------CAAGCCTCAG--CCT-TCCCAGAACACTCAGACGCCCCTATGCACAGAATGAAACCCCAACTGGCAGTCAGGCCAGCAGCTGGGAAGGTGACAGGAAGGAGTCT-CAGGGACC--TGGA--GAAC-ATCTCCAGCAGGCCCT i mm10.chr16 I 1 C 0 s canFam3.chr33 29110790 112 + 31377067 -------------------------------------TGGGCCGCCAGAGCC-TCACAGAAGACCCTGACACCCGGAAATACA--------CCCCCCTCTG--------------GCTCGG--GGTGCGGGGGCGGAG----AGGGGCTCGGCAGGTGGAGC-TTCCCCAGCCGGCCTT i canFam3.chr33 I 18 C 0 s dasNov3.JH569502 3946170 169 + 6579706 CTGACCCTTCCACCTTCCCACCCTCCCCACCCTCCCCTGGGCTGCAGACCCT-CCCCAGAAGACTCGGGCACCCGGAAATACAGAATGAAAC-----CTCGGAGCCAGAGGG-CAGCTTGGAAGGTGCTGGGAGAGGAACG-GGGAGCCC--TAGAGGGTCCCTTCTCCAACAGGCCAC i dasNov3.JH569502 C 0 C 0 e saiBol1.JH378146 501300 0 + 17725628 C a score=50705.000000 s hg38.chr3_KI270779v1_alt 188332 7 + 205312 GCATCCC s panTro5.chr3 200175239 7 + 202621043 GCATCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 131997 7 + 190779 GCATCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22687 7 - 189199 GCATCCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940936 7 + 123690457 GCATCCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515976 7 + 204787373 GCATCCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121396 7 + 192460366 GCATCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607847 7 + 19675229 GCATCCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540041 7 + 16847902 GCATCCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471012 7 - 91754291 GCATCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654903 7 - 1977891 GCATCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516902 7 + 7796314 GCATCCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982919 7 - 74750902 GCATCCC i calJac3.chr17 C 0 C 0 s aotNan1.NW_018507959v1 33332 7 - 3732694 GCATCCC i aotNan1.NW_018507959v1 C 0 I 256 s mm10.chr16 65470677 6 - 98207768 GTGCCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29110902 6 + 31377067 GCTCCC- i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3946339 3 + 6579706 GTA---- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 474472 0 - 608964 C e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=1303371.000000 s hg38.chr3_KI270779v1_alt 188339 270 + 205312 TCCCCTCCCAGCTCTGTA-------------CACGGAGGAG--------------------CCCAAGGCCAATGCCGGGGCTACGAGCCCCAGGC--A-AGGCCGTGACCCAAATGGAGGC-----TTTTAA----------------------------------------------------------------------ACCCGAGC------------TCAGAGGTAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCCGGCCCTCTGCGCCCT--------------------------GGCCGCC------TC-------CTCCGCA-CCACC------CTCCC-GGCCGGCCTGCCCCTCTCCTCCTTGTCG----CTTCCCTTGCTTGCTGC-TGTCTCCCGA--TCTTCTCC-TCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGCG s panTro5.chr3 200175246 270 + 202621043 TCCCCTCCCAGCTCTGTA-------------CACGGAGGag--------------------gccaaggccaatgccagggctacgagccccaggc--a-aggccGTGACCCAAATGGAGGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGTAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCCGGCCCTCTGCGCCCT--------------------------TGCCGCC------TC-------CTCCGCA-CCACC------CTCCC-GGCCGGCCTGCCCCTCTCCCCCTGGTTG----CTTCCCTTGCTTGCTGC-TGTCTCCTGA--TCTTCTCC-TCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132004 270 + 190779 TCCCCTCCCAGCTCTGTA-------------caaggaggag--------------------gccaaggccaatgccagggctacgagccccaggt--a-aggccGTGACCCAAATGGAGGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGTAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCCGGCCCTCTGCGCCCT--------------------------TGCCGCC------TC-------CTCCGCA-CCACC------CTCCC-GGCCGGCCTGCCCCTCTCCCCCTGGTTG----CTTCCCTTGCTTGCTGC-TGTCTCCTGA--TCTTCTCC-TCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22694 292 - 189199 TCCCCTCCCAGCTCTGTA-------------CACGGGGGag--------------------gccaaggccaatgccagggctacgagccccaggc--a-aggccatgacccaagTGGAGAC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGTAAGAAG------------------------CTCACGGC-----------------------------CAGCA-CCTCCCGGCCCTCTGCGCCCTTG--CCGCCTCCTCCGCACCA--CCCTGCCGCC------TC-------CTCCGCA-CCACC------CTCCC-GGCCGGCCTGCCCCTCTCCTCCTTGTCG----CTTCCCTTGCTTGCTGC-TGTCTCCCGA--TCTTCTCC-TCTCTCCATTCCCAGGGT-CCTCACTTTGTCTGTC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120940943 264 + 123690457 TCCCTTCTCAGCTCTGTA-------------CACGGAGGAG--------------------GCCAAGGCCAATGACAGGGCTACGAGCCCCAGGC--A-AGGCCGTGACCCAAGTGGAGGC------TTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGTAAGAAG------------------------CCCA---------------------------------CCGCA-CCTCCCGGCCCTCTCCGCCCT---------------------------GCCGCC------TC-------CTCCGCA-CCGCC------CTCCC-GGCCGGCCTGCCTCTCTCCTCCTTGTCG----CTTCCCTCGCTTGCTGC-TGTCTCCTGA--TCTTCTCA-TCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202515983 266 + 204787373 TTCCCTGCCGGCTCTGTA-------------CATGGAGGAG--------------------GCCAAGGCCAGTGCCA-GGCTGCGAGCCCCAGGC--A-AGGCCGTGACCCAGGTGAAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGCAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCTGGCCCTCTCCGCCCT---------------------------GCTGCC------TC-------CTCCACA-CCGCC------CTCCA--GCCGGCCTGC--CTCTCCTCCTCGTCG----CTTCCCTCGGTTGCTGC-TGTCTCCCAA--TCGTCTCC-TCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121403 266 + 192460366 TCCCCTGCCGGCTCTGTA-------------CATGGAGGAG--------------------GCCAAGGCCAGTGCCA-GGCTGCGAGCCCCAGGC--A-AGGCCGTGACCCAGGTGAAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGCAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCTGGCCCTCTCCGCCCT---------------------------GCTGCC------TC-------CTCCACA-CCGCC------CTCCA--GCCGGCCTGC--CTCTCCTCCTCGTCG----CTTCCCTCGGTTGCTGC-TGTCTCCCGA--TCGTCTCC-TCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 607854 266 + 19675229 TCCCCTGCCGGCTCTGTA-------------CATGGAGGAG--------------------GCCAAGGCCAGTGCCA-GGCTGCGAGCCCCAGGC--A-AGGCCGTGACCCAGGTGAAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGTAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCTGGCCCTCTCCGCCCT---------------------------GCCGCC------TC-------CTCCACA-CCGCC------CTCCA--GCCGGCCTGC--CTCTCCTCCTCGTCG----CTTCCCTCGGTTGCTGC-TGTCTCCTGA--TCGTCTCC-TCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540048 266 + 16847902 TCCCCTGCCGGCTCTGTA-------------CATGGAGGAG--------------------GCCAAGGCCAGTGCCA-GGCTACGAGCCCCAGGC--A-AGGCCGTGATCCAAGTGAAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGCAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCTGGCCCTctccgccct---------------------------gctgcc------tc-------ctccaca-ccgcc------ctcca--gccggcctgc--ctctcctcctGGTCG----CTTCCCTCGGTTGCTGC-TGTCTCCCGA--TCGTCTCC-TCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471019 244 - 91754291 TCCCCTGCCGGCTCTGTA-------------CATGGAGGag--------------------gccaaggccagtgcca-ggctacgagccccaggc--a-aggccGTGACCCAGGTGAAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGCAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCTGGCCCTCT---------------------------------------------------------------CCGTC------CTCCA--GCCGGCCTGC--CTCTTCTCCTCGTCG----CTTCCCTCGGTTGCTGC-TGTCTCCCGA--TCGTCTCC-TCTCTCCGTTCCTAGGGTGTGTCAGTTTGTCTGTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 654910 265 - 1977891 TCCTCTGCCGGCTCTGTA-------------CATGGAGGag--------------------gccaaggccagtgcca-ggctacgagccccaggc--a-aggccGTGATCCAGGTGAAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGCAAGAAG------------------------CCCACGGC-----------------------------CAGCA-CCTCCTGGCCCTCTCCGCCCT---------------------------GCCGCC------TC-------CTCCACA-CCGCC------CTCCA--GCCGGCCTGC--CTCTCCTCCTGGTCG----CTTCCCTCAGTTGCTGC-TGTCTCCCGA--TCGTCTCC-TCTCTCCATTCCCA-GGTGTGTCAGTTTGTCTGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 516909 267 + 7796314 TCCCCTCCCGGCTCTGTA-------------CACAGAGGag--------------------gccgaggccaaggcca-ggctacgcgccccaggc--a-aggccGTGACCCGAGTGGAAGC-----TTTTAA----------------------------------------------------------------------ACCCAAGC------------TCAGAGGCAAAAAG------------------------CTCACGGC-----------------------------CAGCA-CCTCCTGGCCCTCTCCGCCCT---------------------------GCCGCC------TC-------CTCCACG-CCGCC------CTCCA-GGCCGGCCGGC--CTCTCCTCCTTGTCG----CTTCCCTCGGTTGCTGC-TGTCTCCTGA--TCGTCTCC-TCTCTCCATTCCCAGGGTGCGTCAGTTTGTCTGTC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 982926 250 - 74750902 -CCGTCCCTGGCTCTGCATGGAA------GGCATGGAGGGG--------------------GCCGAGGCCAAGGCCAGGGCTATGAGCCCCACAC--A-AGGCC-TGACCCCAGCAGAGGC------TCTAA----------------------------------------------------------------------CCCCAGGC------------TCAGAGGTGAGAAG------------------------CCTGTGGC-----------------------------CAGCC-TCCCCCAGGCCTCCCAGCCCT------------------------------GCC------TC-------CTCCTCA-CCGCC------CTCCA-GGCCG--CGGCCTCTCTCCTCC-----G----CTCCCTGCGGTT-CTGC-CATCTCCTGG--TCACCTCC-TCT-------------GTGCTTCGGTACGTCTGTC i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 474472 433 - 608964 -----CACCAGCTCTGCATGGAGCAGGGTGGCGCAGAGGAG--------------------GCTAAGGCCAACATCAGGACCACCAGCCCTGCCT--GCAGGCCTTGGCTTGGGAGGAGGC-----TTCcagggatgatacctttttttcttttctgctgcacgttagaagaatgagagttttcttaggcaatggagtaaatatacaaacagcaacagctgatcagcaataaaaaggttcgtgtatacttttggtgatatcccacaccatagataagcaaaaaagtcctcacaAAATCAGCA-TTT---GGCCCACAGGGCCACAGGTTGGACACCCCTGCATCAGGGTCAGCAGCC------CCGTGAGCATTTCACAGCCACCTGTTTTCTCTG--GGCGG-CTGC--CTCTTCCC-------------TCCTTTCAGAGCTGC-TG-ATCCTGAAGTCGCCCTC-TCTCTGCATT-------TGCTTTGATTTGTCCACT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65470683 224 - 98207768 ACCACCCTGAACCCTGGG-------------CATAGGTATG----------------------CAAAGCCAAGGCT--GGC-----------AGC--A-TGGTTTTGAAATAGCAGGAGGCTGGGTTTTTGA----------------------------------------------------------------------GAC--AGC------------TCA-----------------------------------CTGACTGCT----------------------------CTGAG-CATCTCAGCTGCCTCTGCCCA-----------------------------CGCCCGGCTTTC-------GTTCCCA-CCATC------CTCCAAAACCGACCCAC--CTC----------------CTTCCTTT-----CTTC-TA-----CAA--TTTTCTCC-TTT----ATGGCCACATT-CTTTAGCTCATTTATT i mm10.chr16 C 0 C 0 s canFam3.chr33 29110909 177 + 31377067 GCCCTCACCGGAGGGAAGCGG----------CCCGCGGGAG--------------------GCCAAGACCAACAGAG-GCCTGTGCGCCCTGCCCCGA-GGGCCGC-AGTCGGGAGGAGGC-----TGCTCA----------------------------------------------------------------------GTCCCAGG------------TCAGGGGCCAGAAG------------------------CCAACCGC-----------------------------TGG-----------------GCGCCTC--------------------------AGCGGGC---------------CTCTGTC-CCGGC------CTGGT-GGCGAGCCCGC----------------------TGCCTGTG----------------------------------------------------------------- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3946342 288 + 6579706 --------CAACTCGGTA-------------CCTGGAGGGGAAGTGGGGGTGTGGAAGGCAGCCAAGGCCAACAGCAGGACTGTAAGCCCTGCCCCGA-AGGCATGAGTCCTCGTGGAGGC-----CTTTAA----------------------------------------------------------------------ACCCAACT------------TCAGCGGCAAGAAA------------------------CCAACCTT-----------------------------CCCCAGCCTCTCGGCTGCCCCCTCATC---------------------------CCTGCC------TTATTT---CTCTCTG-TCCCT------TCCCA-AGGGAGTCTGC--CTCTTGCCCTCCTTGAGCCCTTCCTTTCTGTTCTGCTTGTCTCCTGA--TTTAATCCGCCTCTCTATTCATTTTGC---TTAAGTTGTCTT-- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 33339 256 - 3732694 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=580733.000000 s hg38.chr3_KI270779v1_alt 188609 73 + 205312 TCTCACCTGTCTCGTCCTCTCACCCTGCAGCTTTACATGAG-TTTTCTTCCG----TCTCCATCACCCAGCTTTCCTG s panTro5.chr3 200175516 73 + 202621043 TCTCACCTGTCTCGTCCTCTCATCCTGCGGCTTTACATGAG-TTTTCTTCCG----TCTCCATCACCCAGCTTTCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132274 73 + 190779 TCTCACCTGTCTCGTCCTCTCATCCTGCGGCTTTACATGAG-TTTTCTTCCG----TCTCCATCACCCAGCTTTCCTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 22986 73 - 189199 TCTCACGTGTCTCGTCCTCTCACCCTGCGGCTTTACATGAG-TTTTCTTCCG----TCTCCATCACCCAGCTTTCCTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941207 77 + 123690457 TCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATAAGAG-TTTTCTTCCAGAATTCTCCATCACCCAGCTTTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516249 73 + 204787373 TCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCCG----TCTTCATCACCCAGCTTTCCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121669 73 + 192460366 TCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCCG----TCTTCATCACCCAGCTTTCCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608120 73 + 19675229 TCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCCG----TCTTCATCACCCAGCTTTCCTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540314 73 + 16847902 TCTCACCTGTCTCGTCCTCTCACCCTGCGACTTTATTTGAG-TTTTCTTCCG----TCTTCATCATGCAGCTTTCCTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471263 73 - 91754291 TCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCCG----TCTTCATCACCCAGCTTTCCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655175 73 - 1977891 TCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCCG----TCTTCATCACCCAGCTTTCCTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517176 73 + 7796314 TCTCACCTGTCTCATCCTCTCACCCTGCGGCTTTATTTGCG-TTTTCTTCCG----TCTTCATCGCCCAGCTTTCCTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983176 73 - 74750902 TCTCCCTTGCCTCACCCTCTCGCGCTGCGGCTTTACCTGAGATTTTCTCCCA----GGTCCATCA-CCAGCTTTCCTG i calJac3.chr17 C 0 C 0 s aotNan1.NW_018507959v1 33595 74 - 3732694 TCTCGCCTGCCTCGTCCTCTCACGCTGCGGCTTTGCATGAGATTCTCTTCCG----TCCCCGTCACCCAGCTTTCCTG i aotNan1.NW_018507959v1 I 256 I 284 s otoGar3.GL873829 474905 71 - 608964 --TCTCCCGTCTTGTCCCCTGACTCCACATCTTTAGAGGAG-TTTTCCTTCC----ATGCCATCACCCAGCTTGCCTG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65470907 72 - 98207768 TCTCACCCATCTTGTTTTCTGCTGTGACATCTCTGTAAGAG-TTCTCTTTT-----TCTCCTGTGAGCAGATTTTCTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29111086 9 + 31377067 ---------------------------------------------------------------------TCCTTCTTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946630 64 + 6579706 TCTCACCTGTCCTTTCCTAT--------GACTCTTCATTAG-TTTT-TCTTG----TTTCTGCCACTCAGCGTTTCTG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=813610.000000 s hg38.chr3_KI270779v1_alt 188682 155 + 205312 GCATCCCCTCTACCCCCAGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTC----CTCTTGCTCTGGCTCTGCCTGTCT------TTCTCTCTGC---G---AGTAAGCCTGGGCTCTCA---CCATGGATCCTTCCAGACATCGCCGGGC----------TGctctctgg--ccc s panTro5.chr3 200175589 155 + 202621043 GCATCCCCTCTACCCCCAGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTC----CTCTTGCTCTGGCTCTGCCTGTCT------TTCTCTCTGC---G---AGTAAGCCTGGGCTCTCA---CCATGGACCCTTCCGGACATCGCCGGGC----------TGCTCTCTGG--CCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132347 155 + 190779 GCATCCCCTCTACCCCCAGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTC----CTCTTGCTCTGGCTCTGCCTGTCT------TTCTCTCTGC---A---AGTAAGCCTGGGCTCTCA---CCATGGACCCTTCCGGACATCGCCGGGC----------TGCTCTCTGG--CCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23059 154 - 189199 GCATCCCCTCTACCCCTAGCTCCGTACACAAGCGTGTACAtctttctccttgactctg---ttc----ctcttgctctggctctgcctgtct------ttctctctgt---G---AGTAAGCCT-GGCTCTCA---CCATGGATCCTTCCAGACATCGCCGGGC----------TGCTCTCTGG--CCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941284 154 + 123690457 GCATCCCCTCTACCCCTGGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTC----CTCTTGCTCTGGCTCTGCCTGTCT------TTCTGTCCGC---G---AGTAAGCCTGGGCTCTCA---CCATGGGTCCTTGCAGACATCATC-GGC----------TGctctctgg--ccc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516322 152 + 204787373 GCAT-CCCTCCACCCC-GGCTCTGTACACGG-GGTATGCATCTTTCTCCTCGACTCTG---TTC----CTCTTGCTCCGGCTCTGCCTGTCT------TTCTCTCCGC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCAGGC----------TGCCCTCTGG--TTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121742 154 + 192460366 GCATCCCCTCCACCCT-GGCTCTGTACACAGCGGTGTGCATCTTTCTCCTCGACTCTG---TTC----CTCTTGCTCCGGCTCTGCCTGTCT------TTCTCTCCGC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGC----------TGCCCTCTGG--TTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608193 154 + 19675229 GCATCCCCTCCACCCC-GGCTCTGTACACAGCGGTGTGCATCTTCCTCCTCGACTCTG---TTC----CTCTTGCTCCGGCTCTGCCTGTCT------TTCTCTCCGC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGC----------TGCCctctgc--ttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540387 154 + 16847902 GCATCCCCTCCACCCC-GGCTCTGTACACAGGGGTGTGCATCTTTCTCCTCGACTCTG---TTC----CTCTTGCTCTGGCTCTGCCTGTCT------TTCTCTCCAC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGC----------TGCCCTCTGG--TTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471336 154 - 91754291 GCATCCCCTCCACCCC-GGCTCTGTACACAGGGGTGTGCGTCTTTCTCCTCGACCCTG---TTC----CTCTTGCTCTGGCTCTGCCTGTCT------TTCTCTCCGC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGC----------TGCCCTCTGG--Ttc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655248 154 - 1977891 GCGTCTCCTCCACCCC-GGCTCTGTACACAGGGGTGTGCATCTTTCTCCTCGACTCTG---TTC----CTCTTGCTCTGGCTCTGACTGTCT------TTCTCTCCAC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGC----------TGCCCTCTGG--TTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517249 154 + 7796314 GCATCGCCTCCACCCT-GGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTC----CTCTTGCTGTGGCTCTGCCTGTCT------TTCTTTCTGC---G---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACACCGCCGGGC----------TGctctctgg--ttc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983249 113 - 74750902 -------------------------------------------TTTTCCTTGGCACCGTTTTTC----CTCTTGCTACAGCTCTGCCTGTCT------TTCTCTCCAC---G---AGGAAGCCTGGGCTCCCC---CCAGGGACCCTTCCAGACCTGGCCGGGC----------TTCTCTCTGG----C i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 474976 152 - 608964 --TTTTTCTCTGTCATAGTCTCTTTCCTCAA----------CTTTCC------CTCTC---TCC----TTCATGCTTCAGTCCTGCCTGCCT------CTCTCTCTTCACAA---AATAAGCTCTGGTTGCCC---CCACGGAGTCCCCCAGACCAGGCCACCCATTTACCCATTTCCCGCTGGACATC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65470979 120 - 98207768 ---------------------------------------ATTTTCCCTTTAGAGTCTC---TCCAACTCTCTCACTATGGTCCTGCCTCTTT------CACTTTCTAT---GTAAATGAAGTTCTGGTCCCCTTCACCATAGGTTCCCCAAG------CCAGGC----------CACCTTTTGC--CCC i mm10.chr16 C 0 I 7 s canFam3.chr33 29111095 45 + 31377067 -------------------------------------GCCTCTCCCTCCAGGCCTGCG---GCC----TCCT----------CCGCCTGTCC------CCTTCCC------------------------------------------------------------------------------------ i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946694 100 + 6579706 -----------------------------------------------------TTTTG---CTC----TCCT--CTCCAGCTCTGCCCATCTGACCCCTTCTCTCCAC---A--AAATAAGCCCAGACTCCCC---TAATGAGTTCTCCAA-------CCAGGC----------CAATCCCCCG--CCT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 33669 284 - 3732694 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=504093.000000 s hg38.chr3_KI270779v1_alt 188837 77 + 205312 --------tctgttctcttttctctctctttcgagcattctccctctgtctttcccctcagatcttgtcccgtatctgccagttc s panTro5.chr3 200175744 77 + 202621043 --------TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCCCTCTGCCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAGTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132502 77 + 190779 --------TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCCCTCTGCCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAGTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23213 77 - 189199 --------TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCCCTCTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAGTTC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941438 77 + 123690457 --------tctgtcctcttttctctctctctccagcattctccctctgtctttcccctcagatcttgtcctgtatctgccagttc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516474 75 + 204787373 --------TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121896 75 + 192460366 --------TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608347 75 + 19675229 --------tctgtcctcttttctctctctttcgagcattctcc--ctgtctttcccctcagatcttgtcccgtatctgccaattc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540541 75 + 16847902 --------TCTGTCCTCTTTTCTCTGTCTTTCGAGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471490 74 - 91754291 --------tctgtcctcttttctctctctttcgagcattctct--ctgtcctt-ccctcagatcttgtcccgtatctgccaattc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655402 75 - 1977891 --------TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517403 75 + 7796314 --------tctgtcctcttttctctctctttcgagcattctct--ctgtctttcccctcagatcttgtcccatatctgctaattc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983362 70 - 74750902 --------TCTGTCCTCTCT--TCTGTCTTTCAAGCATTCTCA-----TCTTTCTGCTCACACCTTGTCCTGTACCTGCCAATTC i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 475128 73 - 608964 --------TCTGTGTCTTCTTTTCTGTCTTTCTAGTGTCCCCCTTCTCCCTCTCCCCC---ACCTT-TCCCATCTCTACCCATTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29111140 43 + 31377067 --------------CTCctctctctctctctc------tctct--ctctctACCCCCTCA--------------------CGTTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3946794 73 + 6579706 CCAGAACACCACTCAGCTCCTCTCTCTCACC-------TCTCC-----TCCCCGCCCCCCCATATCAGCCCACCTCGGCCCATTC i dasNov3.JH569502 C 0 M 418 e mm10.chr16 65471099 7 - 98207768 I e aotNan1.NW_018507959v1 33669 284 - 3732694 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=111394.000000 s hg38.chr3_KI270779v1_alt 188914 14 + 205312 atgcctcctcttcc s panTro5.chr3 200175821 14 + 202621043 ATGCCTCCTCTTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132579 14 + 190779 ATGCCTCCTCTTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23290 14 - 189199 ATGCCTCCTCTTCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941515 14 + 123690457 acgcctcctcttcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516549 14 + 204787373 ACACCTCCTCTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121971 14 + 192460366 ACACCTCCTCTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608422 14 + 19675229 acacctcctcttcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540616 14 + 16847902 ACACCTCCTCTTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471564 14 - 91754291 acacctcctcttcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655477 14 - 1977891 ACACCTCCTCTTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517478 14 + 7796314 acacctcctcttcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983432 14 - 74750902 ACACCTCCTCTTCC i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 475201 14 - 608964 ACACCTCTCTCTCT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29111183 14 + 31377067 ATTCCTCTACTTCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65471099 7 - 98207768 I e dasNov3.JH569502 3946867 418 + 6579706 M e aotNan1.NW_018507959v1 33669 284 - 3732694 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=208162.000000 s hg38.chr3_KI270779v1_alt 188928 80 + 205312 ccacttttctcctcttcttatttttta------ttttattt--tatatttatttatttatttatttattta----ttta--------------tttatttattt-at s panTro5.chr3 200175835 60 + 202621043 CCACTTTTCTCCTCTTCttatttttta------ttttattt--ta--------------------tattta----ttta--------------tttatttattt-Gt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132593 60 + 190779 CCACTTTTCTCCTCTTCttatttttta------ttttattt--ta--------------------tattta----ttta--------------tttatttattt-Gt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23304 53 - 189199 CCACTTTTGTCC---TCTTATTTTTTA------ttttattt--ta------------------------ta----ttca--------------tttatttattt-gt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941529 56 + 123690457 ccacttttctcctcttctcatttttaa------ttttattt--ta------------------------ta----ttta--------------tttactcattt-at i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516563 53 + 204787373 CCACTTTTCCCctcttcttatttc----------ttattta--tt------------------------ta----ttta--------------tttatgtatttaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 121985 57 + 192460366 CCACttttcccctcttcttatttctta------tttattta--tt------------------------ta----ttta--------------tttatttatttaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608436 45 + 19675229 ccacttttcccctcttcttatttc--------------------t------------------------ta----ttta--------------tttatttatttaat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540630 57 + 16847902 CCACTTTTCCCCTCTTCTTATTTCTTA------Ttttatta--tt------------------------ta----ttta--------------tttatttatttaat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471578 57 - 91754291 ccactcttcccctcttcttatttctta------ttttatta--tt------------------------ta----ttta--------------tttatctatctaat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655491 57 - 1977891 CCACTTTTCCCCTCTTCTTATTTCTTA------Ttttatta--tt------------------------ta----ctta--------------tttatttatttaat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517492 60 + 7796314 ccacttttcccctcttcttatttctta---ttttttatttt--at------------------------ta----ttta--------------tttatttatttaat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983446 63 - 74750902 CCAC---------CCTCTTCTTTTTTA------TTTGAATTGATT------------------------TA----TTTGAGATGGAGTCTCACTCTGtttgttt-gt i calJac3.chr17 C 0 C 0 s canFam3.chr33 29111197 65 + 31377067 -CACCTGTCTTTTCCTCTGACTCTGCATCTTCTTTtttttt--tt------------------------taagatttta--------------tttatttattc-at i canFam3.chr33 C 0 I 209 e otoGar3.GL873829 475215 0 - 608964 C e mm10.chr16 65471099 7 - 98207768 I e dasNov3.JH569502 3946867 418 + 6579706 M e aotNan1.NW_018507959v1 33669 284 - 3732694 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=730252.000000 s hg38.chr3_KI270779v1_alt 189008 101 + 205312 tttgagacagagtctcgctctctctcccaggctggagtgc-agtggcgcgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcct s panTro5.chr3 200175895 101 + 202621043 tttgagacagagtctcgctctctctcccaggctggagtgc-agtggcgcgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132653 101 + 190779 tttgagacagagtctcgctctctctcccaggctggagtgc-agtggcgcgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23357 101 - 189199 tttgagacagagtctcgctctctctcccaggctggagtgt-agtggcgcgatcttggctcactgcaacctccacctcccatgttcaagtgattctcctgcct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941585 102 + 123690457 tttgagacagagtctcgctgtctctcccaggctggagtgcaagtggcgtgatctcagctcactgcaacctccacctcctgagttcaagtgattctcctgcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516616 101 + 204787373 tttgagacagagtctcactctctctcccaggctggcgtgc-aatggcgcaatctcagctcactgcaaccttcacctcccgggttcaagcgattctcctacct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122042 101 + 192460366 tttgagacagagtctcactctctctcccaggctggcgtgc-aatggcgcaatctcagctcactgcaaccttcacctcccgggttcaagcgattctcctacct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608481 101 + 19675229 tttgagacagagtctcactctctctcctaggctggcgtgc-aatggtgcaatctcagctcactgcaaccttcacctcccgggttcaagcgattctcctacct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540687 101 + 16847902 tttgagacagagtctcactctctctcccaggctggcgtgc-aatggcgcgatctcagctcactgcaaccttcacctcccgggttcgagcgattctcctacct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471635 101 - 91754291 tttgagacagagtctcactctctctcccaggctggcgtgc-aatgacgcgatctcagctcaccgcaaccttcacctcctgggttcaagcgattctcctacct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655548 101 - 1977891 tttgagacagtgtctcactctctctcccaggctggcgtgc-aatggcgcgatctcagctcactgcaaccttcacctcccaggttcaagcgattctcctacct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517552 101 + 7796314 tttgagacagagtctcactctctctcccaggctggcgtgc-aatggcgcgatctcagctcactgcaaccttcacctcctgggttcaagcgatgctcctgcct i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983509 98 - 74750902 -ttgagacggagtcttgctctgcca-ccaggctggagtgc-agtggctccatctcggctcaccgcaacctctccctcccaggttcaagcaattct-ctgcct i calJac3.chr17 C 0 C 0 s aotNan1.NW_018507959v1 33953 101 - 3732694 tttgagatggagtctcgctctgtcacccaggctgcagtgc-agtggcgccatctcagctcaccgcaacctctgccttccaggttcaagcgattctcctgcct i aotNan1.NW_018507959v1 I 284 C 0 e otoGar3.GL873829 475215 0 - 608964 C e mm10.chr16 65471099 7 - 98207768 I e dasNov3.JH569502 3946867 418 + 6579706 M e canFam3.chr33 29111262 209 + 31377067 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I e saiBol1.JH378146 501300 0 + 17725628 C a score=1341090.000000 s hg38.chr3_KI270779v1_alt 189109 176 + 205312 cagactcctgagtagctggaattacaggtggggcccaccacgaccggctaatttttgtatatttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtgat-ctcctgccttggcctccgaaagtgctgggattacaggcatgagccaccgcg s panTro5.chr3 200175996 176 + 202621043 cagactcctgaatagctggaattgcaggtgcggcccaccacgaccggctaatttttgtatatttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtgat-ctcctgcctcggcctccgaaagtgccgggattacaggcgggagccaccgcg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132754 176 + 190779 cagactcctgaatagctggaattacaggtgcggcccaccacgaccggctaatttttgtatatttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtgat-ctcctgcctcggcctccgaaagtgctgggattacaggcgggagccaccgcg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23458 174 - 189199 cagactcctgagtagctgggattacaggcacggcccaccacgaccggctaatttttgtatatttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtgat-ctcctgcctc-gcctccgaaagtgctggggttacaggcgtgaggca-cgcg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941687 176 + 123690457 cagcctcctgagtagctggaattacaggcacctgccaccacgcccggctaatttttgtatatttagtagagatggggtttcaccttgttggccaggctggtgtcaaactcctgacctcaggtgat-ggcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516717 174 + 204787373 cagcctcctgagtagctggaattacacgcatgtgccatcacgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtagt-cgcccgcctcggcctcccaaagtgctgggatgacaggcgtgagccac--cg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122143 174 + 192460366 cagcctcctgagtagctggaattacacgcatgtgccatcacgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtagt-cgcccgcctcagcctcccaaagtgctgggatgacaggcgtgagccac--cg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608582 174 + 19675229 cagcctcctgagtagctggaattacacgcatgtgccatcatgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtagt-cgcccacctcagcctcccaaagtgctgggatgacaggcgtgagccac--cg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540788 174 + 16847902 cagcctcctgagtagctggaattacaggcatgtgccatcacgcccggctaatttttgtatattttgtagagacagggtttctccatgttggccaggctggtctcaaactcctgacctcaggtaat-cgcccgcctcggcctcccaaagtgctgggatgacaggcatgagccac--cg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471736 174 - 91754291 cagcctcctgagtagctggaattacaggcatgtgccatcatgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtaat-cgcccgcctcggcctcccaaagtgctgggatgacaggcgtgagccac--cg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655649 174 - 1977891 cagcctcctgagtagctggaattacaggcatgtgccatcacgcccggctaatttttgtatattttgtagagacagggtttctccatgttggccaggctggtctcaaactcctaacctcaggtaat-cgccctgctcggcctcccaaagtgctgggatgacaggcgtgagccac--cg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517653 174 + 7796314 tagcctcccgagtagctggaattacaggcatgtgccatcatgcccagctaatttttgtatattttatagagacggggtttctccatgttggccaggctggtctcgaactcctgacctcaggtcat-cgcccgcctctgcctcccaaagtgctgggatgacaggcgtgagccac--cg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983607 177 - 74750902 cagcctcctgagtagctgggactacaggtgtgcgccaccacacctggctaatgtttgtatttttagtagcgatggggtttcaccatgttggtcaggcttgtcttgaactcctggcctcaagtgatccacccgccttggcctcctgaagtgctgggattaaaggcttgtgccccggcg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501300 176 + 17725628 cagcctcccgagtagctgggactacagacgtgtgtcaccacccccggctaatttttgtatttttagtaaagatggggtttcaccacgttggccaggctggtcttgaactcctgacctcctg-actacacccgcctcggcctcccaaaatgctgggattgcaggtgtgagccCCGACG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 34054 176 - 3732694 cagcctcctgagtagccgggactacaggcgtgtgtcaccacacctggctgatttttgtatttttagtagagat-gggtttcaccatgtcggtcaggcttgtcttgaactcctgacctcaagtgatccgcccgccttggcctcccagagtgctgggatcacaggcctgagccctgacg i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 475215 0 - 608964 C e mm10.chr16 65471099 7 - 98207768 I e dasNov3.JH569502 3946867 418 + 6579706 M e canFam3.chr33 29111262 209 + 31377067 I e cebCap1.NW_016107444v1 474785 2388 - 6778120 I a score=47457.000000 s hg38.chr3_KI270779v1_alt 189285 19 + 205312 cacggcct--------------------------------------------------------------------------ccactcttctt s panTro5.chr3 200176172 19 + 202621043 ctcggccT--------------------------------------------------------------------------CCActcttctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132930 19 + 190779 ctcggccT--------------------------------------------------------------------------CCActcttctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23632 19 - 189199 cacggccT--------------------------------------------------------------------------CCActcttctt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941863 19 + 123690457 cccggcct--------------------------------------------------------------------------ccactcttctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516891 17 + 204787373 tctggc----------------------------------------------------------------------------cctctcttctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122317 17 + 192460366 TCTGGC----------------------------------------------------------------------------Cctctcttctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608756 17 + 19675229 tctggc----------------------------------------------------------------------------cctctcttctt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540962 17 + 16847902 TCTGGC----------------------------------------------------------------------------Cctgtcttctt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471910 17 - 91754291 tctggc----------------------------------------------------------------------------cctctcttctt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655823 17 - 1977891 TCTGGC----------------------------------------------------------------------------Cctgtcttctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517827 17 + 7796314 tctggc----------------------------------------------------------------------------cctctcttctt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983784 19 - 74750902 ccaagccT--------------------------------------------------------------------------CCCCTCTTCGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501476 93 + 17725628 CGCACCCTCTTTGTTCTCTCTCCCGCCCTTTTCGTTCTCTCGCCCCTCCTTCGTTCTCTCTCCCCCCACTTCGTTCTCTCCCCCCGCCTTCGc i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 34230 18 - 3732694 cccggcc---------------------------------------------------------------------------CCActctttgt i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29111471 19 + 31377067 AGCAGCCT--------------------------------------------------------------------------CCCTCCTCCTC i canFam3.chr33 I 209 C 0 e otoGar3.GL873829 475215 0 - 608964 C e mm10.chr16 65471099 7 - 98207768 I e dasNov3.JH569502 3946867 418 + 6579706 M e cebCap1.NW_016107444v1 474785 2388 - 6778120 I a score=1234157.000000 s hg38.chr3_KI270779v1_alt 189304 201 + 205312 tctctctccctcttctcttcctcttc-tttccctctctgggtctctct---------ccaccttccccccatgttgtcccattcatctctt-tctcctttccctctccctctttt--tctctcccttctcttcctcttcgctg---tctccctttcccctattctctctctctctctctctgtctcCCCGGAC--CTCTTTCTCTGACAGCTCCCACCT s panTro5.chr3 200176191 173 + 202621043 tct-----------------------------ctctctgggtctctct---------ccaccttccccccatgttgtcccattcatctctt-tctcctttctctctccctctttt--tctcgcccttctcttcctcttcgctg---tctccctttcccctat--tctctctctctctctctgtctccccggacctctctttctctGACAGCTCCCACCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 132949 173 + 190779 tct-----------------------------ctctctgggtctctct---------ccaccttccccccatgttgtcccattcatctctt-tctcctttctctctccctctttt--tctcgcccttctcttcctcttcgctg---tctccctttcccctat--tctctctctctctctctgtctccccggacctctctttctctGACAGCTCCCACCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23651 196 - 189199 tctctctccctcttctcttcctcttc-tttccctctctgggtctctct---------ccacctt-cccccatgttgtcccattcatctctt-tctcctttctctctcc--ctttt--tctctcctttctcttcctcttcgcgg---tccccctttcccctgt----tctctctctctgtctgtctccccagacctctctttctctGACAGCTCCCGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120941882 205 + 123690457 tctctctccctcttctcttcctcttc-tttccctctctgggtctctct---------ccaccttccccccaggttgccccattcatctctt-tctcctttctctctccctctttttctctctctcttctcttcctcttcgctg---tctccctttcccctattctctctctctctcCCCCCCCCCCCCCGTACCTTTCTTTCTCTGACAGCTCCCACCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202516908 194 + 204787373 tctctctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt-ccattcatctctt-tctcctttctctctctctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgt--tctctctctttc------tctccccggacctctctttctctGACAGCTCCCAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122334 194 + 192460366 tctctctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt-ccattcatctctt-tctcctttctctctctctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgt--tctctctctttc------tctccccggacctctctttctctGACAGCTCCCAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608773 194 + 19675229 tctctctccctcttcccttcctcttc-tttccctttctgggtctctct---------ccaccctccccccatgctgt-ccattcatctctt-tctcctttctctctctctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgt--tctctctctttc------tctccccggacctctctttctctGACAGCTCCCAGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 540979 194 + 16847902 tctctccccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt-ccattcatctctt-tctcctttctctctccctctttt--tctctctcttctcttcctcttctctg---tctccctttcccctgt--tctctctctttc------tctcccccgacctctctttctctGACAGCTCCCAGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 471927 194 - 91754291 tctctctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt-ccattcatctctt-tctcctttctctctccctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgt--tctctctctttc------tctccctggacctctctttttctGACAGCTCCCAGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 655840 174 - 1977891 tctctccccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccctatgctgt-ccattcatctctt-tctcctttctctctccctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgt--tctctctctttc--------------------------tctGACAGCTCCCAGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 517844 191 + 7796314 tctctctccctctt--cttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgtcccattcatctctt-tctcctttctctctccctctttt--tctctctcttctcttcctcttctctg---tctccctttcccctgt--tctcgcgctttc------tctccctggac--ctctttctctGACAGCTCCCAGTA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983803 160 - 74750902 tctctctccctgctctcttcctcttc-tctccctctctgggtctctct---------cccccttctccccatcgtgtcccattcatctctc-tc---------------------------tctcttctcttcctcttctctg---tctccctttccgctct--tctctctctcCC--------------GGC--CTCTGTCTCTGACAGCCCCCAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501569 166 + 17725628 tctctctccctcctctcttcctcttc-tctcc--ctctggg----tct---------cccccttctccccatctcgccctgttcatctctc-tctcc-----------ctctttt--cctgtctcttctcttcctcttctccg---tctccctttctgctct----tctctctcCA--------------GGC--CTCTCTCTCTGACAGCCCCCAGCT i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 34248 161 - 3732694 tctccctccctcctctctgcctcctc-tccct--ctctgggtctctct---------cccccttccccgcatcttgtcccattcatctctc-tctcc------------------------ttctttctcttcctcttctcgg---tctccctttccgctct--tctctctctccg--------------ggc--ctctctctctGACAGCCCCCAGCT i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65471106 172 - 98207768 TCTCTGTGCCTCTCTTCTTCTATTCC-TT---CTTTGTAACTGTCGTT---------CTAGTGT---------TTGCCCTATTAATCTCTTATCTTCCACCTTGTCCCATACCCA--Cctctctc-tctctctctc-tctctt---tcttcctccctcctcc--cctctctctcct------ttcctcc------cttcctctctGAAG----CCAGCT i mm10.chr16 I 7 C 0 s canFam3.chr33 29111490 181 + 31377067 --TCCCGCCCTCT-------CTCTGCAGTTGCCCCTGCGGCTCTTTCTCAGCATGAACCCTGTTTCCCCAAGACTGCCCGGCCCCTGAGCG-CCGCCCTGCTCCTCGCTGTCCCT--ACACCCCCTTTGCTGGCTCTTCACCGGcctcccgctctcccccat--ctcgtccctcgc------ccccc--------ccctccccccgcca---------- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 475215 0 - 608964 C e dasNov3.JH569502 3946867 418 + 6579706 M e cebCap1.NW_016107444v1 474785 2388 - 6778120 I a score=292089.000000 s hg38.chr3_KI270779v1_alt 189505 37 + 205312 CCCCCAAGTGCTCCCCGCAGCCAGCC-TCA----TCTGCTGT s panTro5.chr3 200176364 37 + 202621043 CCTCCAAGTGCTCCCCGCAGCCAGCC-TCA----TCTGCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133122 37 + 190779 CCCCCAAGTGCTCCCCGCAGCCAGCC-TCA----TCTGCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23847 37 - 189199 CCCCCAAGTGCTCCCCGCAGCCAGCC-TCA----TCTGCTGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942087 37 + 123690457 CCCCCAAGTGCTCCCTGCAGCCAGCC-TCA----CCTGTTGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517102 37 + 204787373 CCCCCATGTGCTCCCCACAGCCAGCC-TCA----CCTGCTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122528 37 + 192460366 CCCCCATGTGCTCCCCACAGCCAGCC-TCA----CCTGCTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 608967 37 + 19675229 CCCCCATGTGCTCCCCACAGCCAGCC-TCA----CCTGCTCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541173 37 + 16847902 CCCCCATGTGCTCCCCACAGCCAGCC-TCA----CCTGCTCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472121 37 - 91754291 CCCCCATGTGCTCCCCACAGCCAGCC-TCA----CCTGCTCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656014 37 - 1977891 CCCCCATGTGCTCCCCACAGCCAGCC-TCA----CCTGCTCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518035 37 + 7796314 CCCCCATGCGCTCCCCGCAGCCAGCC-TCA----CCTGCTCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983963 31 - 74750902 CCCCCACAGGGTCCCAGCAGCCAGCC-TCC----CC------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501735 37 + 17725628 CCCCCATGGGGTCCCAGCAGCCAGCC-TCC----CCTGCCCC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 34409 37 - 3732694 CCCCCATGGGGTCCCAGCAGCCAGCC-TCC----CCTGCCCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 475215 41 - 608964 CTCTGACAGGCTCCCTGAAGCCAGCC-CCAGAACGCTGCCCG i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65471278 25 - 98207768 ------------CCCCTGCCCCAGAC-TTC----TTTCCCAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29111671 31 + 31377067 -gccca---gccccccGCAGGCAGCCACCC----CCTGC--- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3946867 418 + 6579706 M e cebCap1.NW_016107444v1 474785 2388 - 6778120 I a score=1890181.000000 s hg38.chr3_KI270779v1_alt 189542 184 + 205312 CTC-----CATCACTTACCTGGGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGCCCCCTTCATGGCTGCGGCAAAAGTCCCCCTGGCT-CCCTGGGGAAGCTCCACGGC-CCAGCAGCTGCAGTGTGAGGAGCAGACGTGAGC--------------------------------------------------------CCGTCCCCTCA s panTro5.chr3 200176401 184 + 202621043 CTC-----CATCACTTACCTGGGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGCCCCCTTCATGGCTGCGGCAAAAGTCCCCCTGGCT-CCCTGGGGAAGCTCCACGGC-CCAGCAGCTGCAGTGTGAGGAGCAGACGTGAGC--------------------------------------------------------CCGTCCCCTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133159 184 + 190779 CTC-----CATCACTTACCTGGGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGCCCCCTTCATGGCTGCGGCAAAAGTCCCCCTAGCT-CCCTGGGGAAGCTCCACGGC-CCAGCAGCTGCAGTGTGAGGAGCAGACGTGAGC--------------------------------------------------------CCGTCCCCTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 23884 183 - 189199 CTC-----CATCACTTACCTGGGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCGTCCAGCATGCCCCCTTCATGGCTGCGGCAAAAGT-CCCCTGGCT-CCCTGGGGAAGCTCCACGGC-CCAGCAGCTGCAGTGTGAGGAGGAGACGTGAGC--------------------------------------------------------CCGTCCCCTCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942124 182 + 123690457 CTC-----CATCACTTACCCGTGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGGCCCTCCTCCAGCGTGCCCCCCTCATGCCTGCGGCAAAAGTCCCTCTGGCT-CCCTGGGGAAGCTCCACGGC-CCAGGAGCTGCA--GTGAGGAGCAGACGTGAGC--------------------------------------------------------CCGTCCCCTCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517139 183 + 204787373 CTC-----CATCACTTACCTGGGACCACACGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCT-CCCTGGGGAAGCTCCAC-GC-CCAGGAGTCGCAGTATGAGAAGCAGACGTGAGC--------------------------------------------------------CTGTCCCCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122565 183 + 192460366 CTC-----CATCACTTACCTGGGACCACACGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAGAGTTCCTCTGGCT-CCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCAGTATGAGAAGCAGACGTGAGC--------------------------------------------------------CTGTCCCCTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609004 183 + 19675229 CTC-----CATCACTTACCTGGGACCACATGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCT-CCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCAGTATGAGAAGCAGACGTGAGC--------------------------------------------------------CTGTCCCCTCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541210 183 + 16847902 CTC-----CATCACTTACCTGGGACCACACGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCT-CCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCAGTATGAGAAGCAGACGTGAGC--------------------------------------------------------CTGTCCCCTCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472158 183 - 91754291 CTC-----CATCACTTACCTGGGACCACATGTGGAAGGACGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCT-CCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCAGTATGAGAAGCCGACGTGAGC--------------------------------------------------------CTGTCCCCTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656051 176 - 1977891 CTC-----CATCACTTACCTGGGACCACATGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCT-CCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCAGTATGAGAAGC-------AGA--------------------------------------------------------CTGTCCCCTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518072 184 + 7796314 CTC-----CATCACTTACCTGGGACCACATGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCT-CCCTGGGGAAGCTCCCCGGC-CCAGGAGTTGCAGTGTGAGAAGCAGACGTGAGC--------------------------------------------------------CTGTCCCCTCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 983994 180 - 74750902 ---------GTCACTTACCCAGGACCATGTGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCAGGACCCCCTCTTGGTTCCAACAAAAGTCCCTCCGGCT-CCCTGGGGAAGCCCCATGGC-CTAGGAGCTGTGGTGTGAGGAGCAGAACTGAGT--------------------------------------------------------CTGTCTTCTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501772 139 + 17725628 CTC-----TGTCACTTACCCAGGACCACGTGCGGAAGGAGGCAGAGACACAGGCAACTCAGGGACACCCAGGGGACCCTCCTCCAGCA-------------------------------------------GGGAAGCCCCATGGC-C--GGAGCTGTGGTATGACGAGCAGAA-GGAGC--------------------------------------------------------CTGTCCCCTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 477173 142 - 6778120 CTC-----CGTCACTTACCCGGGACCACGTGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCG-------------------------------------------GGGAAGCCCCATGGC-CCAGGAGCTGTGGTGTGAGGAGCAGAAGCGAGC--------------------------------------------------------CTGTCCCCTCT i cebCap1.NW_016107444v1 I 2388 C 0 s aotNan1.NW_018507959v1 34446 183 - 3732694 CTC-----CATTACTTACCCACTACCACTTGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCGGCGGGACCCCCTCATGGCTCCAACAAAAGTCCCTCCTGCT-CCCTGGGGAAGCCCCAGGGC-CCAGGAGCTGTGGTGTGAGGAGCAGAAGCGAG---------------------------------------------------------CTGTCCCCTCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 475257 226 - 608964 CAA-----CATCACTTACCTAGGAGCACTGGCCGAAGGAGGCAGGACCATAAGCAGCTCAAGAGCAGCCAGGGGACCCCCCTC---------------ATGGCTCTAGCGAGAGTCCCTCCAGCTGCCCTGGGGAAGCTCTGTGGC-ACAGAAGTGGTGGTGTGAGGAGCAGAGGTGAGTGGTGGTGTGAGGAGAAGAGGTGAGCGGTGGTGTGAGGAGCAGAGGTGAGCGAGAGACTGTCCCCACT i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65471303 174 - 98207768 ATT-----CTTGTCTTACCAGGTA------GCAAGAGGAGGCAAGAATACAGGCAGCTCAGACACAGCCAGGGAACTC---TCCAGTGAGGCCCTCTCATGGCTCCAG--AGAGTCCCTCAGGCT-CCCTCAGGAATCCCCACAGCACTTGAGGTGGCAGCAGGAGGAGCAGAGGCGAGC--------------------------------------------------------CTGTCCCCACT i mm10.chr16 C 0 C 0 s canFam3.chr33 29111702 175 + 31377067 CCCAGGCGCATCACTCACCCGGGACCACGGGCCAGAGGAGGCAGGAACACAAGCAGCTCAGGAACACCCAGGGGACCCTTCTGCCCCGGGCCCCCCTCATGG-TCCAGCAAGGTTCCCTCGGGCC-CCCCGGGCAAGCTCCGCAGC-ACA-CAGCAG--GTGTGAGGAGCAGAGGAGAAC------------------------------------------------------------------T i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3946867 418 + 6579706 M a score=4241003.000000 s hg38.chr3_KI270779v1_alt 189726 387 + 205312 GGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCCG-AAGGGGCCA----GGGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACGCTAATCACCC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-ACCCCACCAGGAA----AGAA------AAC-ACCGATACACCCGTT-------GCTCTGCTTCTCATCAGCCTGAG------CTGAGTGGCGGGAGGGATGGGAGGAG-ACATG-----------G----GGGAATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTC-----CTAGCCG-GGTTCC-TGGGTCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAAGAAAGG----GCCCCAGAGGGAGCGACCTT-GGGGCTGTATGAA-TGGGGGAAAG--AG s panTro5.chr3 200176585 387 + 202621043 GGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCCG-AAGGGGCCA----GGGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCATGCTAATCACCC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-ACTCCACCAGGAA----AGAA------AAC-ACCGATACACCCATT-------GCTCTGCTTCTCATCAGCCTGAG------CTGAGTGGCGGGAGGGATGGGAGGAG-ACATG-----------G----GGGAATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTC-----CTAGCTG-GGTTCC-TGGGTCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAAAAAAGG----GCCCCAGAGGGAGCAACCTT-GGGGCTGTATGAA-TGGGGGAAAG--AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133343 387 + 190779 GGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCCG-AAGGGGCCA----GGGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACGCTAATCACCC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-ACTCCACCAGGAA----AGAA------AAC-ACCGATACACCCATT-------GCTCTGCTTCTCATCAGCCTGAG------CTGAGTGGCGGGAGGGATGGGAGGAG-ACATG-----------G----GGGAATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTC-----CTAGCTG-GGTTCC-TGGGTCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAAAAAAGG----GCCCCAGAGGGAGCAACCTT-GGGGCTGTATGAA-TGGGGGAAAG--AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24067 393 - 189199 GGCGGCT--GGCC-------CGAACCAAGTGCGTTTCTCGTTTCTCCG-AAGGGGTCA----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCTCACGCTAATCACCC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-ACCCCACCAGGAA----AGAA------AAC-ACCGATACACCCATT-------GCTCTGCTTCTCATCAGCCTGAG------CTGAGTGGC-GGAGGGATGGGAGGAG-ACATG-----------G----GGGAATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTC-----CTAGCTG-GGTTCC-TGGGTCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CAAGAGCTTTGGGCTGCT---------------------------------------AGG----------------------AAGAA-------------------------TGGGGAAGAAAGG----GCCCCAGAGGGAGCGACCTT-GGGGCTGTATGAA-TGGGGGAAAG--AG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942306 381 + 123690457 GGCGGCT--GGCC-------CGAACCAAGTG-------CGCTTCTCCG-AAGGGGCCA----GAGA-ACC--AGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACGCTAATCACCC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-CCCCCACCAGGAA----AGAA------AAC-ACCGATACACCTATT-------GCTCCGCTCCTCACCAGCCTGAG------CTGAGTGGCAGGAGGGACGGGAGGGG-AC--------------G----AGGGATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTC-----CTAGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTG-CCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAAGAAAGG----GCCCCAGACAGAGTGACCTT-GGGGGTGTATGAA-TGGGGGAA----AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517322 398 + 204787373 AGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCTG-AAGGGGCCA----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATT-------GCTCTGCTCCTCACCAGCCTGAGA-----CTGAGTGGCAGGAGGGacgggaggag-acacgggaggagacacg----ggGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCTCCCTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGTAAGAAAGG----GCCGCAGAGGGAGCGACCTT-GCGGGTGTATGAA-GGGGGGAAAG--AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 122748 398 + 192460366 AGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCTG-AAGGGGCCA----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCTACACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATT-------GCTCTGCTCCTCACCAGCCTGAGA-----CTGAGTGGCAGGAGGGacgggaggag-acacgggaggagacacg----ggGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCTCCCTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGTAAGAAAGG----GCCGCAGAGGGAGCGACCTT-GCGGGTGTATGAA-GGGGGGAAAG--AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609187 398 + 19675229 AGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCTG-AAGGGGCCA----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATT-------GCTCTGCTCCTCACCAGCCTGAGA-----CTGAGTGGCAGGAGGGacgggaggag-acacgggaggagacaTG----GGGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCGCCCTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGTAAGAAAGG----GCCGCAGAGGGAGCGACCTT-GCGGGTGTATGAA-GGGGGGAAAG--AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541393 397 + 16847902 AGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCTG-AAGGGGCCG----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATT-------GCTCTGCTCCTCACCAGCCTGAG------CTGAGTGGCAGGAGGGACAggaggag-acacgggaggagacacg----ggGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCGCCCTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCGGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAGGAAAGG----GCCGCAGAGGGAGCGACCTT-GGGGGTGTATGAA-GAGGGGAAAG--AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472341 399 - 91754291 AGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCTG-AAGGGGCCA----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-CCCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATT-------GCTCTGCTCCTCACCAGCCTGAG------CTGAGTGGCAGGAGGGACGGGAGGAG-ATACGGGAGGAGACACG----GGGGATGGGAACAGGTCACACAGGAAATGGGTGGGCCGCCTTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCGGCCCCTGTCCCA-CCAGAACTTTGGGCTACT---------------------------------------GGG----------------------AAGAA-------------------------CGGGGAGGAAAGG----GTCGCAGAGAGAGCGACCTT-GGGGGTGTATGAACGGGGGGAAAG--AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656227 404 - 1977891 AGCGGCT--GGCC-------CGAACCAAGTG-------CGTTTCTCTG-AAGGGGCCA----GAGA-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATTGCTCTGCGCTCTGCTCCTCACCAGCCTGAG------CTGAGTGGCAGGAGGGACAggaggag-acacgggaggagacacg----ggGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCGCCCTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCGGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAAGAAAGG----GCCACAGAGGGAGCGACCTT-GCGGGTGTATGAA-GAGGGGAAAG--AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518256 385 + 7796314 AGCGGCT--GGCC-------CGAACCAAGTG-------CGATTCTCAG-AAGGGGCCA----GAGA-ACC--TGGGAAGAG-GAAAAAAGAGGGCGGGGCCC-GCACCAATCAGGC----------TTTTCTCTCCTCAG-CCCCACCC---------CACT-CCCCCACCAGGAA----AGAA------AAT-ACCGGTGCACCCATT-------GCTCTGCTCCTCACCAGCCTGAG------CTGAGTGGCAGGAGGGACA-------------GGAGGAGACACG----GGGGACAGGAACAGGTCACACAGGAAATGGCTGGGCCACCCTC-----CTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCGGGGGCTGCCCCTGTCCCA-CCAGAACTCTGGGCTTCT---------------------------------------GGG----------------------AAGAA-------------------------TGGGGAAGAAAGG----GCCGCAGAGGGAGCGACCTT-GGGGGTGTATGAA-TGGGGGAAAG--AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984174 363 - 74750902 GGCGGCT--GGCC-------AGAACCAGGTG-------CATTTCCCTG-AAGGGGCCA----GAGG-ACC--CGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACGCCAATCACCC----------TTTTCTTTCCTCAG-CCCCACCC---------CACT-CCCCCACCAGGAA----AGAA------AAC-ACCAATACACCCATT-------TCTCTGCTCCTCATCAG-TTGAG------CCAAGT-GGGGGAGGGACAGGAGGAA-ACGTG-----------G----GGGAACGGGAACAGGGCA------------------CACCCTC-----CTAGTTG-GATTTT-TGGGCCCTCTCCTTCCT-CCCAGGGGCTG--CCCGTCCCA-CCAGACATTTGGGCTGCT---------------------------------------GGG----------------------GAGAA-------------------------TGGAGAAGAAAGG----GCCCTAGAGGGAGCAACCTTGGGGGGTGTATGAA-TGGGGGAAAG---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 501911 363 + 17725628 G-----C--GGCC-------AGAACGAGGTG-------CATTTCCCTA-AAGGGGCCA----GAGG-ACC--TGGGGAGAG-GACAAAAGAGGGCGGGGCCCCACGCCAGTCACCC-----------TTTCTTTCCTCAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAC-ACCAATACACCCATT-------GCTCTGCTCCTCATCGGCCTGAG------CCAAGTGGGGGGAGGGGCAGGAGACG-ACACG-----------GGAGTGGGAACAGGCACACGGGA-------AACGG-TGGGCCACCCTC-----CTG----------C-GGGGCCCTCTCCTTCCT-CCCAGGGGCTG-CCCCGTCCCC-CCAGACATTTGGGCTGCT---------------------------------------GGG----------------------GAGAA-------------------------TGGGGAAGAAAGG----GCCCCAGAGGGAGCAACATT-GGGGGTGTATGAA-TGGGGGAGAG---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 477315 376 - 6778120 GG----C--GGCC-------AGAACCAGGTG-------CATTTCCCCGAAAGGGGCCA----GAGG-ACC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACGCCAGTCACCT-----------TTTCTTCCCTTAG-CCCCACCC---------CACT--CCCCACCAGGAA----AGAA------AAC-ACCAATACACCCATT-------GCCCTGCTCCTCATCAGCCTGAG------CCAAGTGGGGGGAGGGACAGGAGGAG-ACGTG-----------G----GGGAGTGGGAACAGGGCACACCGGAAATGG-TGGGCCACCCTC-----CTG-CGG-GATTCC-TGGGCCCTCTCCTTCCT-CCCAGGGGCTGCCCCTGTCCCC-CCAGACATTTGGGCTGCT---------------------------------------GGG----------------------GAGAA-------------------------TGGGGAAG-TAGG----GCCCCAGAGGGAGCGACCTT-GGGGGTGTATGAA-TGGGGGAGAG---- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 34629 386 - 3732694 GGCGGCC--GGCC-------AGAACCAGGTG-------CATTTCCCTG-AAGGGGCCA----GAGGAAAC--TGGGAAGAG-GACAAAAGAGGGCGGGGCCCCACGCCAATCACCC----------CTTTCTTTCCTTAG-CCCCACCC---------CACT-CCCCCACCAGGAA----AGAA------AAC-ACCAGTACACCCATT-------GCTCTGCTGCTCATCAGCCTGAG------CCAAGTGGGGGGAGGGACAGGAGGAG-ACGTG-----------G----GGGAATGGGAACGGGGTACACCGGAAATGG-TGGGCCACCCTC-----CTAGCTG-GATTCC-TGGGCCCTCTCCTTCCT-CCCAGGGGCTGCCCCTGTCCCA-CCAGACATTTGGGCTGCT---------------------------------------GGG----------------------GAGAA-------------------------TGGGGAAGAAAGG----GCCCCAGAGGGAGCTACCTT-GGGGGTGTATGAA-TGGGGAAAAGAG-- i aotNan1.NW_018507959v1 C 0 I 18 s otoGar3.GL873829 475483 384 - 608964 GGCTGCT--GGCTGCTGGCGTGAAGCAGGTA-------TATTTCCCTG-AAGGGGCTG----GAGG-ACCA-AGGGAGGAG-GACAAAAGAAGGCGGGGCCCCATGCCAATCATCCTTGCCCTGGCTTTTCTTTCCTCAATCTCCACCC---------CTCTTCCCCCACCAGGAA----AGAA------AAT-ACTGATACACCCATT-------GCTCTGC----------CAAGGG------CGAAG----GGGAGGGTCTAG----------------------G----GGGAACAGAAGTGGAATAGATGGGGAATGTGCAGGCCACCCCCTCCCTCTGCCTG-GGCACC-TAGGCCTTGTCCCT----CCCAGGAGCTGCCCCTGTCTTG-CTCCAGCTTTGGGCTGCT---------------------------------------GGA----------------------AAGAA-------------------------TGGGGAAGAAAGG----GTCCCAGAGGGAATGACTTT-GGGTCTGGATGAA-TAGGGGAGAG--GG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65471477 429 - 98207768 GGCTGCT--GGCC-------CCAAACAGGTG-------TATTTCCCTG-AAGGGGTGAGAATGAGT-ACCAGGGGGAGGAG-GACAAAAGAAGGCGTGGCCTCATGCCAATCATCCTTGCCCAGTCTTTTCTTTCCTCAATCCCCACCC---------CTTT-CCCCCACCAGGAA----AAAATAAATTAAT-ACCTGTACACCCATA-------GCTCTGCTCCTTGTCAACTTGAG------CCAAGTGGGAGGAGGGTAGGAGAGGG-ATGTG-----------G----AGAAAGAGAAATGAGACTGGCGGGAAGAGAGAGGG-CACCTTC-----CTGCCTGTGGTCCC-TGAGATCTTTCCTCCCTCTCCTGGATCTGCAATGGCTACAGCTACAGTAGAAGGCAGCT---------------------------------------GGGTCACTTCAGAAGGAAGGGCAGAGATAA-------------------------TAGGGAAGAGCAG------CACAGAGATAAAGAACTT-AAGGCTAGACTAA-CAGGAGAAAA---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29111877 429 + 31377067 GGCGGCTCAGGCT-------GGGGACAGGTG-------TATTTCCCTG--AGGGGCCA----GAGT-ATCA-GGGGAGGAG-GACAAAAGAAGGCGGGGCCCCCTGCCAATCAGCC-TTGCCCGTCTTTTCTTTCCTCAATCTCCAACCGCCGCCGTTTATT-CCCCCACCAGGAAAAAGAGAA------AAC-CCTGATCCACCTATT-------GATCTGCTCCCGGGCAACCTGAG------CTGCTTAGGGGGACGGTC------AG-ACACC-----------A----GGG-------------CACACTGGCAGCCAGCGGGCCACCCTT-----CTGCCTG-GAACCCGTGGGCCCTCCTGTCCCTCCCCAAGGGCTG-CCCTGTCCTG-CCAGGGCTTCGGGCTGCTACCAAGGGAGGCAGTGGGGTGGTTTCAGAAGAAAGGGAAGGG----------------------GAGAA-------------------------CGGAGAACACGGG----GGCCGAGAGGGAGTGAGTTT-GGGGCTGTATGAT-TTGGAGAAG----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3947285 436 + 6579706 GGCTGCT--GGCC-------TGAAA-AGGTG-------TATTTCCCCA-GAGGGGCCA----GAGT-ATC--AGCCAAGGGAGACAAAAGAAGGCGGGGCCCCACGCCAATCATCCTGGTCCGGTCTTTTCTTTCCTACC-TCCGACCC---------CCCT-CCCCCACCAGGAA----AAAA------ACCTACCGATACACCCATC-------GCTGCGCTCGGAGTCAGCCGGGGAGCAGCCCGGGAGGGAGAGGGCACAGCAGGGGCGCACT-----------G----GGGACAGCAACCCGGTCTCACAGCAGATGAGCGCGCCACCCA------CTGCCTG-GGTCCT-GGGCCTCCCCCCTCCCTCCCCAGG--CTGCCCCTGTCCTG-CTGGAGTTTGGGGCTGCT----------GCAGT------------------------GGG----------------------AAGAAGCTGGGTCGATTTCAAGAAAAAGGGCAGGCAAGAAAGGAGAAGCTTCTGAAAGGGGAAGAAA-GGGGTTGCCTGAA-GAGGGGAAAG--GG i dasNov3.JH569502 M 418 C 0 a score=282008.000000 s hg38.chr3_KI270779v1_alt 190113 27 + 205312 AGTGAGACTTAAGCAGACCC--------------CAAGGAA s panTro5.chr3 200176972 27 + 202621043 AGTGAGACTTAAGCAGACCC--------------CAAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133730 27 + 190779 AGTGAGACTTAAGCAGACCC--------------CAAGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24460 27 - 189199 AGTGAGACTTAAGCAGTCCC--------------CAAGGAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942687 27 + 123690457 AGTGAGATTTCAGCAGACCC--------------CAGGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517720 27 + 204787373 AGTGAGATTTACGCAGACCC--------------CAGGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123146 27 + 192460366 AGTGAGATTTACGCAGACCC--------------CAGGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609585 27 + 19675229 AGTGAGATTTACGCAGACCC--------------CAGGGAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541790 27 + 16847902 AGTGAGATTTAAGCAGACCC--------------CAGGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472740 27 - 91754291 AGTGAGATTTAAGCAGACCC--------------CAGGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656631 27 - 1977891 AGTGAGATTTAAGCAGACCC--------------CAGGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518641 27 + 7796314 AGTGAGATTTAAGCAGACCC--------------CAGGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984537 27 - 74750902 AGTAAGATTTAAGGAGACTC--------------CAGGGAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502274 27 + 17725628 AGTGAGATTTAAGGAGACCC--------------CGGGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 477691 27 - 6778120 AGTGAGATTTAAGGAGACCC--------------CAGGGAA i cebCap1.NW_016107444v1 C 0 I 2 s otoGar3.GL873829 475867 20 - 608964 ----AG---TAAAGAGACCC--------------TAAGAAA i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65471906 27 - 98207768 AGTGAGGTTTATAGGTACTA--------------TAATGAG i mm10.chr16 C 0 I 1 s canFam3.chr33 29112306 27 + 31377067 GGTGAGCTTTGAGGAGACCC--------------TAAGGAG i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3947721 40 + 6579706 AGTGAGAGTTGAG-AGACCCTCCTCCCCTGAGGACAGGGGA i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 35015 18 - 3732694 I a score=65529.000000 s hg38.chr3_KI270779v1_alt 190140 8 + 205312 TTGGGAAG s panTro5.chr3 200176999 8 + 202621043 TTGGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133757 8 + 190779 TTGGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24487 8 - 189199 TTGGGAAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942714 8 + 123690457 TTGGGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517747 8 + 204787373 ATAGGAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123173 8 + 192460366 ATAGGAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609612 8 + 19675229 ATAGGAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541817 8 + 16847902 ATAGGAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472767 8 - 91754291 ATAGGAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656658 8 - 1977891 ATAGGAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518668 8 + 7796314 AGAGGAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984564 8 - 74750902 CAGGGAAG i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 502301 8 + 17725628 CAGGGAAG i saiBol1.JH378146 C 0 I 4 s otoGar3.GL873829 475888 8 - 608964 ACAGGGAG i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65471934 8 - 98207768 ATGGGGAG i mm10.chr16 I 1 I 2 s canFam3.chr33 29112337 8 + 31377067 ACAGGGAG i canFam3.chr33 I 4 I 1 s dasNov3.JH569502 3947761 8 + 6579706 GTGGGGGG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 35015 18 - 3732694 I e cebCap1.NW_016107444v1 477718 2 - 6778120 I a score=41755.000000 s hg38.chr3_KI270779v1_alt 190148 5 + 205312 CGGGG- s panTro5.chr3 200177007 5 + 202621043 CGGGG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133765 5 + 190779 CGGGG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24495 5 - 189199 CGGGG- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942722 5 + 123690457 CGGGG- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517755 5 + 204787373 CGGGG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123181 5 + 192460366 CGGGG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609620 5 + 19675229 CGGGG- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541825 5 + 16847902 CGGGG- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472775 5 - 91754291 CGGGG- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656666 5 - 1977891 CGGGG- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518676 5 + 7796314 CAGGG- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984573 3 - 74750902 --CGG- i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 502313 5 + 17725628 AACGG- i saiBol1.JH378146 I 4 C 0 s aotNan1.NW_018507959v1 35033 5 - 3732694 CGGGG- i aotNan1.NW_018507959v1 I 18 C 0 s otoGar3.GL873829 475896 5 - 608964 TGGGG- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65471944 5 - 98207768 AGGGC- i mm10.chr16 I 2 C 0 s canFam3.chr33 29112346 5 + 31377067 GAGGG- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3947769 5 + 6579706 -GGGGG i dasNov3.JH569502 C 0 I 935 e cebCap1.NW_016107444v1 477718 2 - 6778120 I a score=-1243.000000 s hg38.chr3_KI270779v1_alt 190153 4 + 205312 A-ACC s panTro5.chr3 200177012 4 + 202621043 A-ACC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133770 4 + 190779 A-ACC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24500 4 - 189199 A-ACC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942727 4 + 123690457 A-ACC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517760 5 + 204787373 GAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123186 5 + 192460366 GAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609625 5 + 19675229 GAACC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541830 5 + 16847902 GAACC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472780 5 - 91754291 GAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656671 5 - 1977891 AAACC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518681 4 + 7796314 G-GCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984576 4 - 74750902 G-ACG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502318 4 + 17725628 A-ACG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 35038 4 - 3732694 A-ACG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 475901 4 - 608964 A-ACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65471949 4 - 98207768 A-ACT i mm10.chr16 C 0 C 0 s canFam3.chr33 29112351 4 + 31377067 G-ACA i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e cebCap1.NW_016107444v1 477718 2 - 6778120 I a score=273433.000000 s hg38.chr3_KI270779v1_alt 190157 31 + 205312 ATGT-GGG-TGAGGGGCAGGAA-CAGAAATGCAC s panTro5.chr3 200177016 31 + 202621043 ATGT-GGG-TGAGGGGCAGGAA-CAGAAATGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133774 31 + 190779 ATGT-GGG-TGAGGGGCAGGAA-CAGAAATGCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24504 31 - 189199 ATGT-GGG-TGAGGGGCAGGAA-CAGAAATGCAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942731 31 + 123690457 ATGT-GGG-TGAGGGGCAGGAA-CAGAAATGCAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517765 26 + 204787373 ATGT-GGG-TGAGGGGCAGGAA-CAGAAA----- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123191 26 + 192460366 ATGT-GGG-TGAGGGGCAGGAA-CAGAAA----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609630 26 + 19675229 ATGT-GGG-TGAGGGGCAGGAA-CAGAAA----- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541835 26 + 16847902 ATGT-GGG-TGAGGGGCGGGAA-CAGAAA----- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472785 26 - 91754291 ATGT-AGG-TGAGGGGCAGGAA-CAGAAA----- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656676 26 - 1977891 ATGT-GGG-TGAGGGGCAGGAA-CAGAAA----- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518685 31 + 7796314 ATGT-GGG-TGAGGGGCAGGAG-CAGAAATGCAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984580 31 - 74750902 ATGC-CGG-TGAGGGGCAGGAA-CGGAAATGCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502322 20 + 17725628 GTTC-AGG-TGAGGGGCAGGAA------------ i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 477720 31 - 6778120 ATGT-GGG-TGAGGGGCAGGAA-CAGAAAGGCAC i cebCap1.NW_016107444v1 I 2 I 180 s aotNan1.NW_018507959v1 35042 31 - 3732694 ATGC-TGG-TGAGGGGCAGGAA-CAGAAATGCAC i aotNan1.NW_018507959v1 C 0 I 2 s otoGar3.GL873829 475905 32 - 608964 AGGTGGGG-TGAGGGGTAGCAA-TAGAAATACAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65471953 31 - 98207768 ATAT-GTA-ATAAGGGGTGGAA-TAGAGATACCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29112355 33 + 31377067 ATGC-AGGCTGAGAGGTAGGCGTTGGAGATGCCC i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I a score=56855.000000 s hg38.chr3_KI270779v1_alt 190188 7 + 205312 TGTATGC s panTro5.chr3 200177047 7 + 202621043 TGTATGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133805 7 + 190779 TGTATGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24535 7 - 189199 TGTATGC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942762 7 + 123690457 TGTATGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517791 7 + 204787373 TGTACGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123217 7 + 192460366 TGTACGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609656 7 + 19675229 TGTACGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541861 7 + 16847902 TGTACGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472811 7 - 91754291 TGTATGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656702 7 - 1977891 TGTACGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518716 7 + 7796314 TGTATGC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 475937 7 - 608964 TGTGTGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65471984 7 - 98207768 TATACGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29112388 7 + 31377067 TGGATGC i canFam3.chr33 C 0 I 300 e dasNov3.JH569502 3947774 935 + 6579706 I e aotNan1.NW_018507959v1 35073 2 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984611 0 - 74750902 C e saiBol1.JH378146 502342 0 + 17725628 C a score=74486.000000 s hg38.chr3_KI270779v1_alt 190195 10 + 205312 CGTCTTTTGG s panTro5.chr3 200177054 10 + 202621043 CGTCTTTTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133812 10 + 190779 CGTCTTTTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24542 10 - 189199 CGTCTTTTGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942769 10 + 123690457 CATCTTTTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517798 10 + 204787373 CATCTTTTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123224 10 + 192460366 CATCTTTTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609663 10 + 19675229 CATCTTTTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541868 10 + 16847902 CATCTTTTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472818 10 - 91754291 CATCTTTTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656709 10 - 1977891 CATCTTTTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518723 10 + 7796314 CATCTTTTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984611 2 - 74750902 CA-------- i calJac3.chr17 C 0 C 0 s otoGar3.GL873829 475944 10 - 608964 CATCTTTTGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65471991 10 - 98207768 CATCTTTTGG i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35073 2 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e saiBol1.JH378146 502342 0 + 17725628 C a score=328105.000000 s hg38.chr3_KI270779v1_alt 190205 33 + 205312 AAAGGGGTGGTGTGCTTGGAATATCTGCTCAGT s panTro5.chr3 200177064 33 + 202621043 AAAGGGGTGGTGTACTTAGAATATCTGCTCAGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133822 33 + 190779 AAAGGGGTGGTGTACTTAGAATATCTGCTCAGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24552 33 - 189199 AAAGGGGTGGTGTGCTTAGAATATCTGCTCAGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942779 33 + 123690457 AAAGGGGTGGTATGCTTAGAATATCTGCTCAGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517808 33 + 204787373 AAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123234 33 + 192460366 AAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i macFas5.chr2 C 0 I 2 s macNem1.NW_012014355v1 609673 33 + 19675229 AAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541878 33 + 16847902 AAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472828 33 - 91754291 AAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656719 33 - 1977891 AAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518733 33 + 7796314 AAAGGAGTGTTGTGCTTAGAATATCTGCTCAGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984613 32 - 74750902 AAGGGGGTGGTGTGCCTAGAAG-TCTGCCCAGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502342 28 + 17725628 -----GGGGGTGTGCCTAGAAGATCTGCTCAGC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 35075 33 - 3732694 AAAGGGGTGGTGTGCCCAGAAGATCTGCTCAGT i aotNan1.NW_018507959v1 I 2 C 0 s otoGar3.GL873829 475954 33 - 608964 AAAAGGGTGGTGGGCTTAGGATATCTGCCCAGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65472001 32 - 98207768 -AATGGGTGATGAGGTTAGACCATCAGCTCAGT i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I a score=3942.000000 s hg38.chr3_KI270779v1_alt 190238 2 + 205312 GC s panTro5.chr3 200177097 2 + 202621043 GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133855 1 + 190779 G- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24585 2 - 189199 GC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942812 1 + 123690457 G- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517841 2 + 204787373 GC i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 609706 2 + 19675229 GC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541911 2 + 16847902 GC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472861 2 - 91754291 GC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656752 2 - 1977891 GC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518766 2 + 7796314 GC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984645 2 - 74750902 GT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502370 2 + 17725628 GC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 35108 2 - 3732694 GC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 475987 2 - 608964 GC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65472033 2 - 98207768 AT i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macFas5.chr2 123267 2 + 192460366 I a score=5755.000000 s hg38.chr3_KI270779v1_alt 190240 2 + 205312 -AG s panTro5.chr3 200177099 2 + 202621043 -AG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 24587 2 - 189199 -AG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202517843 2 + 204787373 -AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123269 2 + 192460366 -AG i macFas5.chr2 I 2 C 0 s macNem1.NW_012014355v1 609708 2 + 19675229 -AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541913 2 + 16847902 -AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472863 2 - 91754291 -AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656754 2 - 1977891 -AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518768 2 + 7796314 -AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984647 2 - 74750902 -AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502372 2 + 17725628 -AG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 35110 2 - 3732694 -AG i aotNan1.NW_018507959v1 C 0 I 143 s otoGar3.GL873829 475990 1 - 608964 -A- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65472035 2 - 98207768 CA- i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133856 0 + 190779 C e nomLeu3.chr11 120942813 0 + 123690457 C a score=7397.000000 s hg38.chr3_KI270779v1_alt 190242 2 + 205312 GC s panTro5.chr3 200177101 2 + 202621043 AC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 24589 2 - 189199 AT i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202517845 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123271 2 + 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609710 2 + 19675229 AT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541915 2 + 16847902 AC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472865 2 - 91754291 AT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656756 2 - 1977891 AC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518770 2 + 7796314 AC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984649 2 - 74750902 AC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502374 2 + 17725628 AC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 475991 2 - 608964 GC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65472037 2 - 98207768 GC i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133856 0 + 190779 C e nomLeu3.chr11 120942813 0 + 123690457 C a score=56528.000000 s hg38.chr3_KI270779v1_alt 190244 11 + 205312 GCGTGGCAGAC s panTro5.chr3 200177103 11 + 202621043 GCGTGGCAGAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 24591 11 - 189199 GCATGGCAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202517847 11 + 204787373 GCATGGCAGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123273 11 + 192460366 GCATGGCAGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609712 11 + 19675229 GCATGGCAGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541917 11 + 16847902 GCATGGCAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472867 11 - 91754291 GCATGGCAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656758 11 - 1977891 ACATGGCAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518772 11 + 7796314 ACATGGCAGAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984651 11 - 74750902 AGATGGTCGAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502376 11 + 17725628 ACATGGTCGAC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65472039 9 - 98207768 --ATGTGAAAC i mm10.chr16 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133856 0 + 190779 C e nomLeu3.chr11 120942813 0 + 123690457 C a score=15381.000000 s hg38.chr3_KI270779v1_alt 190255 4 + 205312 CC------------------------CA s panTro5.chr3 200177114 4 + 202621043 CC------------------------CA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133856 2 + 190779 --------------------------CA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24602 28 - 189199 CCCAGACACATGGCAGACCGTCAGTGCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942813 2 + 123690457 --------------------------CA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517858 4 + 204787373 CC------------------------CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123284 4 + 192460366 CC------------------------CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609723 4 + 19675229 CC------------------------CA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541928 4 + 16847902 CC------------------------CA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472878 4 - 91754291 CC------------------------CA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656769 4 - 1977891 CC------------------------CA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518783 4 + 7796314 CC------------------------CA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984662 4 - 74750902 CC------------------------CA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502387 4 + 17725628 CC------------------------CA i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I a score=68230.000000 s hg38.chr3_KI270779v1_alt 190259 14 + 205312 GACGCGTGGCAGAC s panTro5.chr3 200177118 14 + 202621043 GACGCGTGGCAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133858 14 + 190779 GACGCGTGGCAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24630 14 - 189199 GACGCGTGGCAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942815 13 + 123690457 GACGCATGGCAGA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517862 14 + 204787373 GACGCATGGCTGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123288 14 + 192460366 GACGCATGGCTGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609727 14 + 19675229 GACGCATGGCTGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 541932 14 + 16847902 GATGCGTGGCAGAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472882 14 - 91754291 GACACATGGCAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 656773 14 - 1977891 GATGTGTGGCAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518787 14 + 7796314 GACGCGTGGCAGAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C a score=133341.000000 s hg38.chr3_KI270779v1_alt 190273 35 + 205312 CC------CAGACGCGTGGCAGACCCCAGACG------------------------------------------------------------CGTGGCAGA s panTro5.chr3 200177132 35 + 202621043 CC------CAGACGCATGGCAGACCCCAGACG------------------------------------------------------------CATGGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133872 35 + 190779 CC------CAGACGCATGGCAGACCCCAGACG------------------------------------------------------------CATGGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24644 95 - 189199 CC------CAGATGCATGGCAGACCCCAGACGCATGGCAGACTCCAGACGCATGGCAGACCCTCAGTGCAAATGCGTGGCAGACCCCAGACACATGGCAGA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942828 35 + 123690457 CC------CAGACACATGGCAGACCCTAGACG------------------------------------------------------------CATGGCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517876 41 + 204787373 CCTCAGGGCAGGCGCGTGGCAGACCCCAGATG------------------------------------------------------------CGTGGCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123302 41 + 192460366 CCTCAGGGCAGGCGCGTGGCAGACCCCAGATG------------------------------------------------------------CGTGGCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609741 41 + 19675229 CCTCAGGGCAGGCGCATGGCAGACCCCAGATG------------------------------------------------------------CGTGGCAGA i macNem1.NW_012014355v1 C 0 I 3 s cerAty1.NW_012004056v1 541946 41 + 16847902 CCTCAGAGCAGGCGCGTGGCAGACCCCAGATG------------------------------------------------------------CGTGGCAGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656787 41 - 1977891 CCTCAGAGCAGGCGCGTGGCAGACCCCAGATG------------------------------------------------------------CGTGGCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518801 40 + 7796314 -CCCAGGGCAGGTGCGTGGCAGACCCCAGACG------------------------------------------------------------CATGGCAGA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C a score=131346.000000 s hg38.chr3_KI270779v1_alt 190308 42 + 205312 ACCTCAGTGCAGATGCGTGGCAGACCCCAGACGCACGGCAGA s panTro5.chr3 200177167 42 + 202621043 CCCTCAGTGCAGACGCGTGGCAGACCCCAGACACATGGCAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 133907 42 + 190779 CCCTCAGTGCAGACGCGTGGCAGACCCCAGACACATGGCAGA i panPan2.chrUn_NW_014024201v1 C 0 I 563 s gorGor5.CYUI01000254v1 24739 42 - 189199 CCCTCAGTGCAGATGCGTGGCAGACCCCAGATGCATGGCAGA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942863 42 + 123690457 CCCTCAGTGCAGACGCGTGGCAGACCCCAGACGTGTGGCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517917 27 + 204787373 CCCTCAGGGCAGGCGCGTGGCAGACCC--------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123343 40 + 192460366 CCCTCAGGGCAGGCGCGTGGCAGACCC--GACGCATGGCAGA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 541987 40 + 16847902 CCCTCAGGGCAGGCGCGTGGCAGACCC--GACGCATGGCAGA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656828 40 - 1977891 CCCTCAGGGCAGGCGCGTGGCAGACCC--GACGCATGGCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518841 42 + 7796314 CCCTCAGAGCAGGCGCGTGGCAGACCCCAGACGCGTGGCAGA i colAng1.NW_012118932v1 C 0 I 20 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C a score=5514.000000 s hg38.chr3_KI270779v1_alt 190350 3 + 205312 TCC s panTro5.chr3 200177209 3 + 202621043 CCC i panTro5.chr3 C 0 I 66 s gorGor5.CYUI01000254v1 24781 3 - 189199 CCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942905 3 + 123690457 CCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 123383 3 + 192460366 CCC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 542027 3 + 16847902 CCC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656868 3 - 1977891 CCC i manLeu1.NW_012102020v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133949 563 + 190779 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e colAng1.NW_012118932v1 518883 20 + 7796314 I e chlSab2.chr15 472896 0 - 91754291 C e rheMac8.chr2 202517944 0 + 204787373 C a score=36983.000000 s hg38.chr3_KI270779v1_alt 190353 16 + 205312 CAGACACATGGCAGAC s panTro5.chr3 200177278 16 + 202621043 CAGACGCGTGGCAGAC i panTro5.chr3 I 66 C 0 s gorGor5.CYUI01000254v1 24784 16 - 189199 CAGACGCATGGCAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942908 16 + 123690457 CAGACGCATGACAGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 123386 16 + 192460366 CAGATGCGTGGCAGAC i macFas5.chr2 C 0 T 32 s cerAty1.NW_012004056v1 542030 16 + 16847902 CAGACGCATGGCCGAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656871 16 - 1977891 CAGACGCATGGCAGAC i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 518903 16 + 7796314 CAGACACATGGCAGAC i colAng1.NW_012118932v1 I 20 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133949 563 + 190779 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C e rheMac8.chr2 202517944 0 + 204787373 C a score=6639.000000 s hg38.chr3_KI270779v1_alt 190369 4 + 205312 CCCA s panTro5.chr3 200177294 4 + 202621043 CCCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 24800 4 - 189199 TCCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942924 4 + 123690457 CCCA i nomLeu3.chr11 C 0 C 0 s cerAty1.NW_012004056v1 542046 4 + 16847902 CCCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656888 4 - 1977891 CTCA i manLeu1.NW_012102020v1 I 1 I 21 s colAng1.NW_012118932v1 518919 4 + 7796314 CCCA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133949 563 + 190779 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C e macFas5.chr2 123402 32 + 192460366 T e rheMac8.chr2 202517944 0 + 204787373 C a score=13656.000000 s hg38.chr3_KI270779v1_alt 190373 6 + 205312 GACCCA s panTro5.chr3 200177298 6 + 202621043 GACGCA i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 24804 6 - 189199 GACGCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942928 6 + 123690457 GACGCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517944 6 + 204787373 GACGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123370 6 + 192460366 GACGCA i macFas5.chr2 T 32 C 0 s cerAty1.NW_012004056v1 542050 6 + 16847902 GATGCG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656913 6 - 1977891 AATGCA i manLeu1.NW_012102020v1 I 21 C 0 s colAng1.NW_012118932v1 518923 6 + 7796314 GACACG i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e panPan2.chrUn_NW_014024201v1 133949 563 + 190779 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C a score=4095.000000 s hg38.chr3_KI270779v1_alt 190379 1 + 205312 T s panTro5.chr3 200177304 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134512 1 + 190779 T i panPan2.chrUn_NW_014024201v1 I 563 C 0 s gorGor5.CYUI01000254v1 24810 1 - 189199 T i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120942934 1 + 123690457 T i nomLeu3.chr11 C 0 M 176 s rheMac8.chr2 202517950 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123376 1 + 192460366 T i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 542056 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656919 1 - 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518929 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C a score=23696.000000 s hg38.chr3_KI270779v1_alt 190380 12 + 205312 GGCAGACTC------CAG s panTro5.chr3 200177305 18 + 202621043 GGCAGACCCTCAGTGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134513 12 + 190779 GGCAGACCC------CAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24811 18 - 189199 GGCAGAACCTCAGTGCAG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202517951 9 + 204787373 GGCAGACCC--------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123377 12 + 192460366 GGCAGACCC------CAG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 542057 18 + 16847902 GGCAGACCCTCAGAGCAG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656920 12 - 1977891 GGCAGACCC------GAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 518930 12 + 7796314 GGCAGACCC------CAG i colAng1.NW_012118932v1 C 0 M 1825 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C e nomLeu3.chr11 120942935 176 + 123690457 M a score=10699.000000 s hg38.chr3_KI270779v1_alt 190392 7 + 205312 ACGCGTG s panTro5.chr3 200177323 7 + 202621043 ACGCGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134525 7 + 190779 ATGTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24829 7 - 189199 ACGCGTG i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 123389 7 + 192460366 ATGCGTG i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 542075 7 + 16847902 GCGCGTG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656932 7 - 1977891 ACGCATG i manLeu1.NW_012102020v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e colAng1.NW_012118932v1 518942 1825 + 7796314 M e chlSab2.chr15 472896 0 - 91754291 C e rheMac8.chr2 202517960 0 + 204787373 C e nomLeu3.chr11 120942935 176 + 123690457 M a score=21896.000000 s hg38.chr3_KI270779v1_alt 190399 8 + 205312 GCAGACCC s panTro5.chr3 200177330 8 + 202621043 GCAGACCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134532 8 + 190779 GCAGACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24836 8 - 189199 GCAGACCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943111 8 + 123690457 GCAGACCC i nomLeu3.chr11 M 176 C 0 s macFas5.chr2 123396 8 + 192460366 GCAGACCC i macFas5.chr2 C 0 T 94 s cerAty1.NW_012004056v1 542082 8 + 16847902 GCAGACCC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656939 8 - 1977891 GCAGACCC i manLeu1.NW_012102020v1 C 0 I 6 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e colAng1.NW_012118932v1 518942 1825 + 7796314 M e chlSab2.chr15 472896 0 - 91754291 C e rheMac8.chr2 202517960 0 + 204787373 C a score=91541.000000 s hg38.chr3_KI270779v1_alt 190407 42 + 205312 CAGACGCGTGGCAGACTC------------------------------------------CAGACGCATGGCAGAACCTCAGTG s panTro5.chr3 200177338 42 + 202621043 CAGATGCGTGGCAGACCC------------------------------------------CAGACGCATGGCAGACCCTCAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134540 48 + 190779 CAGACACATGGCAGACCCTCAGGG------------------------------------CAGACGCATGGCAGACCCTCAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24844 84 - 189199 CAGACGCATGGCAGACCCTCAGTGTAGACATGTGGCAGACCCCAGATGCGTGGCAGACCCCAGACACATGGCAGACCCTCAGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943119 47 + 123690457 CAGATGCGTGGCAGACCT-CAGTG------------------------------------CAGGCGCATGGCAGACCCTCAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517960 16 + 204787373 CAGACGCATGGCAGAC-------------------------------------------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123310 42 + 192460366 CAGGCGCGTGGCAGACCC------------------------------------------CAGATGCGTGGCAGACCCTCAGGG i macFas5.chr2 T 94 C 0 s cerAty1.NW_012004056v1 542090 40 + 16847902 --GATGCATGGCAGACCC------------------------------------------GAGACGCATGGCAGACCCTCAGGG i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656953 42 - 1977891 CAGGCGCGTGGCAGACCC------------------------------------------CAGACGCATGGCAGACCCTCAGGG i manLeu1.NW_012102020v1 I 6 C 0 s colAng1.NW_012118932v1 520797 36 + 7796314 CAGGCGCGTGGCAGACCC------------------------------------------CAGACGCATGGCAGACCC------ i colAng1.NW_012118932v1 M 1825 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e macNem1.NW_012014355v1 609782 3 + 19675229 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C a score=26105.000000 s hg38.chr3_KI270779v1_alt 190449 8 + 205312 CAGACTCG s panTro5.chr3 200177380 8 + 202621043 CAGACGCG i panTro5.chr3 C 0 I 558 s panPan2.chrUn_NW_014024201v1 134588 8 + 190779 CAGACTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24928 8 - 189199 CAGACGCA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943166 8 + 123690457 CAGGCGCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 123352 8 + 192460366 CAGGCGCG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609785 8 + 19675229 CAGACGCA i macNem1.NW_012014355v1 I 3 C 0 s cerAty1.NW_012004056v1 542130 8 + 16847902 CAGGCGCA i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 656995 8 - 1977891 CAGGCGCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 520833 8 + 7796314 CAGACGCG i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C e rheMac8.chr2 202517976 0 + 204787373 C a score=32859.000000 s hg38.chr3_KI270779v1_alt 190457 8 + 205312 TGGCAGAA s panTro5.chr3 200177946 8 + 202621043 TGGCAGAC i panTro5.chr3 I 558 C 0 s panPan2.chrUn_NW_014024201v1 134596 8 + 190779 TGGCAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24936 8 - 189199 TGGCAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943174 8 + 123690457 TGGCAGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 123360 8 + 192460366 TGGCAGAC i macFas5.chr2 C 0 I 34 s macNem1.NW_012014355v1 609793 8 + 19675229 TGGCAGAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542138 8 + 16847902 TGGCAGAC i cerAty1.NW_012004056v1 C 0 I 18 s manLeu1.NW_012102020v1 657003 8 - 1977891 TGGCAGAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 520841 8 + 7796314 TGGCAGAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e chlSab2.chr15 472896 0 - 91754291 C e rheMac8.chr2 202517976 0 + 204787373 C a score=5500.000000 s hg38.chr3_KI270779v1_alt 190465 1 + 205312 C s panTro5.chr3 200177954 1 + 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 134604 1 + 190779 C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24944 1 - 189199 C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943182 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517976 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123402 1 + 192460366 C i macFas5.chr2 I 34 C 0 s macNem1.NW_012014355v1 609801 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542164 1 + 16847902 C i cerAty1.NW_012004056v1 I 18 C 0 s chlSab2.chr15 472896 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 520849 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e canFam3.chr33 29112395 300 + 31377067 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e manLeu1.NW_012102020v1 657011 0 - 1977891 C a score=97388.000000 s hg38.chr3_KI270779v1_alt 190466 25 + 205312 CTCAG------TGCAGAC-------GCATGGCAGACCC s panTro5.chr3 200177955 25 + 202621043 CTCAG------TGCAGAC-------TCGTGGCAGACCC i panTro5.chr3 C 0 I 896 s panPan2.chrUn_NW_014024201v1 134605 25 + 190779 CTCAG------TGCAGAC-------GCGTGGCAGACCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 24945 25 - 189199 CTCAG------GGCAGAC-------GCATGGCAGACCC i gorGor5.CYUI01000254v1 C 0 I 804 s nomLeu3.chr11 120943183 25 + 123690457 CTCAG------TGCAGGC-------ACGTGGCAGACCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202517977 25 + 204787373 CTCAG------GGCAGGC-------GCGTGGCAGACCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123403 25 + 192460366 CTCAG------GGCAGGC-------GCATGGCAGACCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609802 24 + 19675229 CTC-G------GGCAGGC-------GCATGGCAGACCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542165 25 + 16847902 CTCAG------GGCAGGC-------GCGTGGCAGACCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472897 25 - 91754291 CTCAG------GGCAGGC-------GCGTGGCAGACCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657011 38 - 1977891 CCCAGATGCGTGGCAGACCCCAGATGCGTGGCAGACCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 520850 12 + 7796314 CTCAG------GGCAGGC-------------------- i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29112695 21 + 31377067 CTCAG------AATATCT-------GCTTAGCAC---- i canFam3.chr33 I 300 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C a score=19342.000000 s hg38.chr3_KI270779v1_alt 190491 5 + 205312 CAGAT s panPan2.chrUn_NW_014024201v1 134630 5 + 190779 CAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943208 5 + 123690457 CAGAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518002 5 + 204787373 CAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123428 5 + 192460366 CAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609826 5 + 19675229 CAGAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542190 5 + 16847902 CAGAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472922 5 - 91754291 CAGAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657049 5 - 1977891 CAGAT i manLeu1.NW_012102020v1 C 0 C 0 s canFam3.chr33 29112716 5 + 31377067 CAGAC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 475993 0 - 608964 C e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e colAng1.NW_012118932v1 520862 0 + 7796314 C e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=70751.000000 s hg38.chr3_KI270779v1_alt 190496 15 + 205312 GCGTGGCAGACCCTC s panPan2.chrUn_NW_014024201v1 134635 15 + 190779 GCGTGGCAGACCTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943213 15 + 123690457 GTGTGGCAGACCCTC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518007 15 + 204787373 GCGTGGCAGACCCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123433 15 + 192460366 GCGTGGCAGACCCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609831 15 + 19675229 GCGTGGCAGACCCTC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542195 15 + 16847902 GCGTGGCAGACCCTC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472927 15 - 91754291 GCATGGCAGACCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657054 15 - 1977891 GCGTGGCAGACCCTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 520862 15 + 7796314 GCGTGGCAGACCCTC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 475993 15 - 608964 ACATGGTGGATCCTC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29112721 15 + 31377067 ACACCATAGTGTCTC i canFam3.chr33 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e calJac3.chr17 984666 0 - 74750902 C e saiBol1.JH378146 502391 0 + 17725628 C e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=39044.000000 s hg38.chr3_KI270779v1_alt 190511 5 + 205312 ACCAG s panPan2.chrUn_NW_014024201v1 134650 5 + 190779 ACCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943228 5 + 123690457 ACCAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518022 5 + 204787373 ACCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123448 5 + 192460366 ACCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609846 5 + 19675229 ACCAA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542210 5 + 16847902 ACCAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472942 5 - 91754291 ACCAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657069 5 - 1977891 ACCAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 520877 5 + 7796314 ACCAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984666 5 - 74750902 ACCAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502391 5 + 17725628 ACCAA i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 476008 5 - 608964 ACCAG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29112736 5 + 31377067 ACCAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e dasNov3.JH569502 3947774 935 + 6579706 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=621476.000000 s hg38.chr3_KI270779v1_alt 190516 135 + 205312 ATGGTGGACTTCTTCTTTCCAGGgcagggagc-tggagcc------------------------------------------agggtgcagggagccagggacagTCTGGGAGACTGGCCTGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGCAGAACCTCGGTAGGA-GGAA----------GCGACT s panPan2.chrUn_NW_014024201v1 134655 135 + 190779 ATGGTGGACTTCTTCTTTCCAAGGCAGGGAGC-TGAAGTC------------------------------------------AGGGTGCAGGGAGCCCGGGACAGTCTGGGAGACTGGCCTGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGCGGAACCTCGGTAGGA-GGGA----------GCGACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943233 113 + 123690457 ATGGTGGACTTCTTT-----------------------CC------------------------------------------AGGGTGCAGGGAGCCCGGGACAGTCTGGGAGACTGGCCTGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGA-GGGA----------GTGACT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518027 139 + 204787373 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCT------------------------------------------ACGGTGCAGGGAGCCTGGGACAGTGTGGGAGGCTGGCCCGAGTGAGCTGGCGTGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGA-GGAG------CAGTGCAGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123453 139 + 192460366 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCT------------------------------------------ACGGTGCAGGGAGCCTGGGACAGTGTGGGAGGCTGGCCCGAGTGAGCTGGCGTGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGA-GGAG------CAGTGCAGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609851 133 + 19675229 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CTG------------------------------------------------GGTGCAGGGAGCCTGGGACAGTGTGGGAGGCTGGCCCGAGTGAGCTGGCGTGGGCAGCGGG-TTGAAGGTGGAACCTGGGTAGGA-GGAG------CAGTGCAGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542215 139 + 16847902 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCT------------------------------------------ATGGTGCAGGGAGCCTGGGACAGTGTGGGAGACTGGCCCGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGA-GGAG------CAATGCAGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 472947 139 - 91754291 ATGGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCT------------------------------------------ATGGTGCAGGGAGCCTGGGACAGTGTGGGAGACTGGCCCGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGA-GGAG------CAATCCAGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657074 139 - 1977891 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCT------------------------------------------ACGGTGCAGGGAACCTGGGACAGTGTGGGAGACTGGCCCGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGA-GGAG------CAATGCAGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 520882 140 + 7796314 ATGGTGAACTTCTTTTTTCCAGGGCAGAGAGC-CAGAGCT------------------------------------------GCGGTGCAGGGAGCCTGGGACAGTGTGGGAGACTGGCCCGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGCGGAACCTGGGTAGGAGGGAG------CAATGCAGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984671 113 - 74750902 ATGGCAGAGTTCTT---TCCAAGACAGGGAGC-CAAAGCC------------------------------------------GGGGTGCAGGGAGCCTGGGACCCTCTGGGAGAGTAGCCAGAGGGATCTGGCCTGGGCAGTGGG-C-------------------GGA-GGGA----------GCAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502396 155 + 17725628 ACAGCGGAGTTCTT---TCCAGGACAGGGAGC-CAAAGCCGGGGTGCAGGGAGCCAAAGCCGGGGTGCAGGGAGCCAAAGCTGGGGTGCAGGGAGCCTGGGACCCTCTGGGAGAGTAGCCAGAGGGATCTGGCCTGGGCAGTGGT-T-------------------GGA-GGGA----------GCAGCT i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 476013 92 - 608964 ATGGTGGATTTCTTCTTTCGAGGACAGAGAGCACCAAGCA---------------------------------------------------GAAGCCAGAGA--GTCTGGGCAAGCAGCTTGAGGGATCTGGCCTGGGTAGCAGT--------------------------------------------- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65472048 126 - 98207768 ATGGTGGATGTCTTCTGTCTGGGACAGGGAGT-------------------------------------------------------------ATCTGAGGATACTAGGGGAAAA-AGCTTAAAAGATTTGCCAAGGCTAGTAGG-GTTCACATAGAAACTAGGTAGAA-TGTTTTTTCATCACCCGGAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29112741 141 + 31377067 ATGGTGGGTTTCTTCTTTCTAAAGGAGGGAACACAGAGCT------------------------------------------GGGGTCCAGAGAGCCCAAGACAACCTGGGAAAGTGGCTTTAGGTATCTGGTATGGGTAGAGGGATTGAAGGTAGAGGCTGGGGAGAT-GTCC------TAGTGACCCT i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3947774 935 + 6579706 I e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=31184.000000 s hg38.chr3_KI270779v1_alt 190651 9 + 205312 GTAACCTGT s panPan2.chrUn_NW_014024201v1 134790 9 + 190779 GTAACCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943346 9 + 123690457 GTAACCTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518166 9 + 204787373 GTAACCCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123592 9 + 192460366 GTAACCCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609984 9 + 19675229 GTAACCCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542354 9 + 16847902 GTAACCTAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473086 9 - 91754291 GTAACCTAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657213 9 - 1977891 GTAACCTAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521022 9 + 7796314 GTAACCTAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984784 9 - 74750902 GTCACCTAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502551 9 + 17725628 GTCACCGAC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65472174 2 - 98207768 GT------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29112882 2 + 31377067 AC------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3948709 9 + 6579706 GTGTCCTAG i dasNov3.JH569502 I 935 C 0 e otoGar3.GL873829 476105 0 - 608964 C e aotNan1.NW_018507959v1 35112 143 - 3732694 I e cebCap1.NW_016107444v1 477751 180 - 6778120 I e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=839157.000000 s hg38.chr3_KI270779v1_alt 190660 98 + 205312 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCTGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGCGAGGAGGGAAAGGGACCCCA s panPan2.chrUn_NW_014024201v1 134799 98 + 190779 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCTGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGCGAGGAGGGACAGGGACCCCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943355 98 + 123690457 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCTGCTCACCTCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGCGAGGAGGGACAGGGACCCCA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518175 98 + 204787373 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCATCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAAGGACCCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123601 98 + 192460366 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAAGGACCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 609993 98 + 19675229 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAAGGACCCCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542363 98 + 16847902 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGACTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAATGAAGAGGGACAGGGACCCCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473095 98 - 91754291 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAGGGATCCCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657222 98 - 1977891 GAGGAGGT---GGAGCTGCTCCTGGAGACCTGGGGACTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAGGGACCACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521031 98 + 7796314 GAGGAGGT---GGAGCTGCTCCTGGCGACCCGGGGGCTCCGCTCACCCCAGTT-------------------CCAGCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACCGGGACCCCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984793 90 - 74750902 GAGGAAGT---GGAGTTGCTCCTGGAGACCCAGTGGCTCCGCTCACCCGGATT-------------------TGACCTG-------TCACAGG-ACAGGCAAGGAGGGGCAGGGACCCCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502560 97 + 17725628 GAGGAAGT---GGAGCTGCTCCTGGAGACCCAGGGGCTCCGCTCACCCGG-TT-------------------TGACCTGTTGGAACTCAGAGGCACAGGCAAGGAGGGGCAGGGACCCCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 477931 96 - 6778120 GAGGAAGT---GGAGCTGCTCCTGGAGA-TCGGGGGCTCCGCTCACCCGG-TT-------------------TGACCTGTTGGAACTCACAGGCACAGGCAAGGAGGGGCAGGGACCCCA i cebCap1.NW_016107444v1 I 180 C 0 s aotNan1.NW_018507959v1 35255 97 - 3732694 GAGGAAGT---GGAGCTGGTCCTGGAGACCCGGGGGTTCCGCTCACCCGA-TT-------------------TGACCTGTTGGAACTCACAGGCACAGGCAAGGAGGGGCAGGGACCCCA i aotNan1.NW_018507959v1 I 143 I 88 s otoGar3.GL873829 476105 75 - 608964 --------------------------GACCCCAGGGCTCAGATCACCCTATTT-------------------TGACCTCTTGGGACTCACAGGCACAAGCAAGAAGGGAAATGGACCCCA i otoGar3.GL873829 C 0 I 14 s mm10.chr16 65472176 108 - 98207768 GAGGGG----------TGCCCCTAGAGAACTGGAGGTTTGAATCATCCTGTTTTGGAACTCACCAGCTTAGACAACCTCTCAGAACTC--AGACTGAAGCAAGGAAGGCTATGGACTTTG i mm10.chr16 C 0 I 22 s canFam3.chr33 29112884 99 + 31377067 AAGAAACTATGGGATTCTCTTCTGGAAATCATAAGGCTCAGGTCACTCCATTT-------------------TTACGTTTTGGGACTTTCC--CACAGCCAAGAGGGAACAGGAACCCCA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3948718 97 + 6579706 GAGAAAGT--GGGGGCTGCTCCTGGAT-TCCGAGGGCTCAGGACACCC-ATTT-------------------TGATCTCCTGGGACTCACTCGCACAACCGAACAGGGACAGAAACCCCA i dasNov3.JH569502 C 0 C 0 e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=424195.000000 s hg38.chr3_KI270779v1_alt 190758 70 + 205312 --------------AGTAGGGT--------TGTAAAGACGA-AGA-GGGCAG----TTGGTGTAGCTCTCTGCAAAGGAAAACGG-GGATACC-TCCGCT s panPan2.chrUn_NW_014024201v1 134897 70 + 190779 --------------AGCAGGGT--------TGTAAAGACGA-AGA-GGGCAG----TTGGTGTAGCTCTCTGCAAAGGAAAACGG-GGTTACC-TCCGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943453 69 + 123690457 --------------AGCA-GGT--------TGTGAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCTGCAAAGGAAAACGG-GGATACC-TCTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518273 70 + 204787373 --------------AACAGGGT--------TGTAAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACC-TCCGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123699 70 + 192460366 --------------AACAGGGT--------TGTAAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACC-TCCGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610091 70 + 19675229 --------------AACAGGGT--------TGTAAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACC-TCCGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542461 70 + 16847902 --------------AACAAGGT--------TGTAAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACC-TCCGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473193 70 - 91754291 --------------AACAGGGT--------TGTAAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCTGCAAAGGCAAACGG-GGATACC-TCCGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657320 70 - 1977891 --------------AACAAGGT--------TGTAAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACC-TCCGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521129 70 + 7796314 --------------AGCAGGGT--------TGTGAAGGTGA-AGA-GGGCAG----TTGGTGTAGCTCTCTGCAAAGGCAAACGG-GGATACC-TCCGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984883 68 - 74750902 --------------AGCAGGGT--------CGTAAAGGCAA-AGA-GGGCCG----TTGGTGTAGCTCTCTGAAAGG--GAAACA-GGACACC-CCTGTA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502657 69 + 17725628 --------------AGCAGGGT--------TGTAAAGGCAA-AGA-GAGCCG----TTAATGTAGCTCTCTGAAAGC--AAACAG-GGAGTCCGCCTACA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478027 70 - 6778120 --------------AGCGGGTT--------TGTAAAGGCGA-AGA-GGGCCG----TTGGTGTAGCTCTCTGAAAGGCAAAGAGG-GGACACC-CTTGCA i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 476194 70 - 608964 --------------AACTGGGT--------CCTAAAGGTGAGGGA-GAGTAG----GTGGTGT--CACTCTACAAAGGACAATAACAGAGACC-CCCACC i otoGar3.GL873829 I 14 C 0 s mm10.chr16 65472306 70 - 98207768 --------------GGCAGAAT--------TCTGAAGTTGA-TGG-TGGTGGGATTTTGGTAAAGCTGTGTGAAGA---AAGAGG-GGAGCTT-TCTCC- i mm10.chr16 I 22 C 0 s canFam3.chr33 29112983 77 + 31377067 --------------GACAGGGTGTGCCAGGTATAGTTATGA-GGGCGGGAAG----TGGGTGTAGC--TCCACAAAGGAAAACAGTGGAGATC-TTCTC- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3948815 79 + 6579706 GATGGGGTGTGCTGGGCGGGGT--------TCTGAAGGTGAGGGA-AGTTAG----TTGGTATAGC--TACGCAAAGGAGGGCAGTGGAGATT-T----- i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 35352 88 - 3732694 I e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=1457843.000000 s hg38.chr3_KI270779v1_alt 190828 169 + 205312 CCCCTCTTTGCCACAGTGTGAATCTCTGCTTCTGATTCCTCAAGACTTGATT-CCCGAATGTGGGGTG--TCTGTGGGGTGACTCGTCCCAGAGCAGGGACCTTCGATGCTCAGACACT-----GTGGGGCCCAGGACAAGGACTCAGGGTTTCTGCATTCCCAAGCAGAGCCAGCC s panPan2.chrUn_NW_014024201v1 134967 169 + 190779 CCCCTCTTTGCCACAGTGTGAATCTCTGCTTCTGATTCCTCAAGACTTGATT-CCCGAATGTGGGGTG--TCTGTGGGGTGACTCGTCCCAGAGCAGGGACCTTCGATGCTCAGACACT-----GTGGGGCCCAGGACAAGGACTCAGGGTTTCTGCATTCCCAAGCAGAGCCAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943522 169 + 123690457 CCCCTCTTTGCCACAGTGTGAATCTCCGCTTCTGATTCCTCAAGACTTGATT-CCCAAATGTGGGGTG--TCTGTGGGGTGACTGGTCCCAGAGCAGGGATCTTCAGTGCTCAGGCACC-----GTGGGGCTCAGGACAAGGACTCCGGGTTTCTGCATTCCCAAGCAAAGCCAGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518343 169 + 204787373 CCGCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAGGACTTGAAT-CCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-----GTGGGGCCCAGGACGAGGAATCGGGGTTTCCGCATTCCCGAGCAGAGCCAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123769 169 + 192460366 CCGCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAGGACTTGAAT-CCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-----GTGGGGCCCAGGACGAGGAATCGGGGTTTCCGCATTCCCGAGCAGAGCCAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610161 169 + 19675229 CCGCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAGGACTTGAAT-CCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-----ATGGGGCCCAGGACGAGGAATCGGGGTTTCCGCATTCCCGAGCAGAGCCAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542531 167 + 16847902 CCCCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAAGACTTGAAT-CCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-----GTAAGG-CCAGGACGAGGAATC-GGGTTTCTGCATTCCCGAGCAGAGCCAGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473263 169 - 91754291 CCCCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAAGACGTGAAT-CCTGAACGTGGGGTG--TCTATGGAGCGACTGGTCCCAGAGCAGGGACTCCCGACACTCAGACACC-----GTGGGGCCCAGGATGAGGAATCGGGGTTTCTGCATTCCCGAGCAGAGCCAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657390 167 - 1977891 CCCCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAAGACTTGAAT-CCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-----GTGGGG-CCAGGACAAGGAATC-GGGTTTCTGCATTCCCGAGCAGAGCCAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521199 174 + 7796314 CACCTCTTCGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAAGACGTGAAT-CCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTGCCGACACTCAGACGTCCAGAGCAGGGGCCCAGGACGAGGAATCGGGGTTTCTGCCTTCCCGAGCAGAGCCAGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 984951 166 - 74750902 CCCCTCTTTGC--CAGTGTG-ATTTCTGCTTCTGGTTCCTCAAGACTTGATT-CCTGAATGTGGGGTG--TCTGTGGAGTGACTCGTCGCAGAGCAGGGACCTTAGGCTCCCAGACACC-----ATGGAGCCCAGGATGAGCACTCGGGGTTTCTGCATTCCCAGGAGGAGCCAGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502726 167 + 17725628 CCCCTCTTTGC--CAGTGTGAATCTCTGCTTCTGGTTCCTCAAGACTTGATT-CCTGAATGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACCTTAGGCTCTCAGACACC-----GTGGAACCCAGGATGAGCACTCAGGGTTTCTGCATTCCCAGGAAGAGCCAGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478097 167 - 6778120 CCCCTCTTTGT--CAGTGTGAATCTCTGCTTCTGGTTCCTCAAGACTTGATT-CCTGAATGTGGGGTG--TCTGTGGAGTGACGGGTCCCAGAGCAGGGACCTTAGGCTCTCAGACACC-----GTGGAGCCGAGGATGAGCACTTGGGGTTTCTGCATTCCCAGGAAGAGCCAGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35440 167 - 3732694 CCCCTCTTTGC--CAGTGTCAATCTCTGCTTCTGCTTCCTCGAGACTTGATT-CCTGAATGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACCTTAGGCTCTCAGACGCC-----ATGGAGCCCAGGGTGAGCACTCGGGGTTTCTGCATTCCCACGAAGAGCCAGCC i aotNan1.NW_018507959v1 I 88 I 122 s otoGar3.GL873829 476264 158 - 608964 ------CCTGCCACA---TGAACCCCTGCTCCCGCTTCCTCAAGACTTGGTT-CCAGAGTGT-GGGTG--TCTGCAGAGTGACAAGTCGCAGGGCAGGGGCCTTGTGCTCTCAGACTCT-----GTGG-GCCCAGGATGAAGATTTGGCATTTCCAAGTACACAGGCAGAGCCCGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65472376 148 - 98207768 TTACCCTTAGCCACTGCACGAATCTCTGCTTCTAACACCTCAAGGCACCATT-CGCTAGGAGTGGGTA--TCTGTGGAGTGACTGGTCCCAAAGCAAAG-------------------------ACAGAGAGCAAGATAAGCA-TCGGCATTTTGGCCTTCTCAGGCAGAGCCAGCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29113060 170 + 31377067 CCACCCCTTGCCACAGCATGAATCTCTCCCTCTGGTTCCTCAAGACTTGGTT-CCCT-GTGGGGGGTGGATCTATGGAGTGATTGATCCCAAAGCAGGGAGTTCAGGATCTCAAACACAG----GCCCAGCCCAGGAC-AGGAATTAGCATTTCCACATTCCCAGGTGGAACGAGCC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3948894 115 + 6579706 ----------------------TCCCCACCTTTGGT---TCAAGACCCCATTCCCTGAGTGCAGGCTT--TCCGGGGAGTGAC----------------------------CAGAGACC-----ATGGAGCCCAGGAAAAGGAATC-TCATTTCCACGTT-GCAAGCAGAGCTGGTC i dasNov3.JH569502 C 0 C 0 e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=542978.000000 s hg38.chr3_KI270779v1_alt 190997 101 + 205312 TTGTCCAGCAAGGAGTAGGCAACCGACGCTGTGGCGCTGTCTCCGAGG--GTCACGGAGGCCCTG-------------------------TG-------ACCACTTGCTTCTAGAAGCTGAAAGTCTGTTCATGG s panPan2.chrUn_NW_014024201v1 135136 101 + 190779 TTGTCCAGCAAGGAGTAGGCAGCCGACGCTGTGGCGCCGTCTCCGAGG--GTCACGGAGGCCCTG-------------------------TG-------ACCACTTGCTTCTAGAAGCTGAAAGTCTGTTCATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120943691 101 + 123690457 TTGTCCAGCGAGGAGTAGGCAGCTGACGCTGTGGTGCCATCTCCGAGG--GTCATGGAGGCCCTG-------------------------TG-------ACCACTTGCTTCTAGAATCTGAAAGTCCGTTCATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518512 101 + 204787373 TCGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAAGCCCTG-------------------------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTCGGTTCATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 123938 101 + 192460366 TCGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAAGCCCTG-------------------------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTCGGTTCATGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610330 101 + 19675229 TCGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAAGCCCTG-------------------------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTCGGTTCATGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542698 101 + 16847902 TTGTCCAGCGAGGATTAGGCAGCGGACACCGTGGTGCCGTCTCTGAGG--GTCATGGAGGCCCTG-------------------------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTCGGTTCATGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473432 101 - 91754291 TTGTCCAGCGAGGATTAGGCAGCGGACGCCGTGCTGCCGTCTCTGAGG--GTCATGGAGGCCCTG-------------------------TG-------ATCACTTGCTTCTAGAAGCTAAAAGTCGGTTCATGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657557 101 - 1977891 TTGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAGGCCCTG-------------------------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTCGGTCCATGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521373 101 + 7796314 TCGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAGGCCCTG-------------------------TG-------ACCACTTGCTTCTAGAAGCTGAAAGTCCGTTCATGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985117 71 - 74750902 TCGTCCAGCGA-GAGTCCACAGCGGACACTGTAGTGACATCTCCAAGG--GTCGTGGAGGTCCTG-------------------------TG-------ACCACTT----------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502893 70 + 17725628 TCGT-CAGTGA-GAGTCCCCAGCGGACACTGTGGTGCCGTCTCCAAGG--GTCGTGGAGGTCCTG-------------------------TG-------ACCACTT----------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478264 71 - 6778120 TCGTCCAGCGA-GAGTCCACAGCGGACACTGTGGTGTCGTCTTCAAGG--GCCGTGGAGGTCCTG-------------------------TG-------ACCACTT----------------------------- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 476422 98 - 608964 TTTGCCAACAA---GCAGATAGCTG-TACTGTGGTGCCATCACAGAGT--GCCATTGAAGCCCTG------------------------TTG-------ACCACTGGCTTTCTGAAGCTACAAGTCCAGTTATGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65472524 103 - 98207768 -----TTGCTAAGGCAACATAGTGGCAG--GTTGTTTCATTTCATAGACCGCCACCGAAGACCTC-------------------------GGTAGGTCTAACACCTGCTGACCATGTCAGTAAGACATTCCACGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29113230 108 + 31377067 GTATCCAAAGAGGAGTAAACGGCCAATGCCATGATGC--TCTCAGAGG--ACCACGAAGGCCCCACCA----------------CCCTGTTG-------GCTTCTTACTTGCTGAAGCTTAAAATCCAATTACAT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3949009 122 + 6579706 --CTGCAAGGGGGAGTGGGTGGCTGAGAC--TGGTAGCAGCTTGGAGG--GCCATGAAGGCCCCGCCACCTAGTAACGCTCCGCCCCCACTG-------GCTACTCACTTTCTGAAGCTAAAAGTTCAGTTATAG i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 35607 122 - 3732694 I e gorGor5.CYUI01000254v1 24970 804 - 189199 I e panTro5.chr3 200177980 896 + 202621043 I a score=239006.000000 s hg38.chr3_KI270779v1_alt 191098 61 + 205312 CCCCAGGCCAAAGCCTGGGCCACGCCATA----------ATAATGCGGATACCGTGGGGAAGTG------------GCGTGGT s panPan2.chrUn_NW_014024201v1 135237 61 + 190779 CCCCAGGCCAAAGCCTGGGCCACGCCATA----------ATAATGCGGATACCGTGGGGAGGTG------------GCGTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 25774 61 - 189199 CCCCAGGCCAAAGCCTGGGTCACGCCATA----------ATAATGCGGATACTGTGGGGAAGTG------------GCACGGT i gorGor5.CYUI01000254v1 I 804 C 0 s nomLeu3.chr11 120943792 61 + 123690457 CCCCAGGCCAAAGCCTGGGCCACGCCATA----------GTAATGCGGATACCGTGGGGAAGTG------------GCATGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518613 50 + 204787373 CCCAAGGCCAAAGCCTG---CACGCCC------------------AGGATACTGTGGGCAAGTG------------GTGTGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124039 50 + 192460366 CCCAAGGCCAAAGCCTG---CACGCCC------------------AGGATACTGTGGGCAAGTG------------GTGTGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610431 50 + 19675229 CCCAAGGCCAAAGCCTG---CACGCCC------------------AGGATACTGTGGGCAAGTG------------GTGTGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542799 50 + 16847902 CCCAGGGCCAAAGCCTG---CACGCCC------------------AGGATACCGTGGGCAAGTG------------GTGTGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473533 50 - 91754291 CCCAAGGCCAAAGCCTG---CACGCCC------------------AGGATACCGTGGGCAAGTG------------GTGTGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657658 50 - 1977891 CCCAAGGCCAAAGCCTG---CACGCCC------------------AGGATACCGTGGGCAAGTG------------GTGTGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521474 50 + 7796314 CCCAAGGCCAAAGCCTG---CACGCCC------------------AGGATACCGCGGGCAAGTG------------GTGTGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985188 55 - 74750902 CCCAAGGTCAAAGCCTG-----GGCCGTA----------ACAATGCCAACACTGTGGAGAGGA-------------GCATGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 502963 55 + 17725628 TCCGAGGTCGAAGCCTG-----GGCCGGA----------ACAATGCGGACACTGTGGAGAGGT-------------GCATGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478335 55 - 6778120 CCCAAGGTCAAAGCCTG-----GGCCGTA----------ACAACACGGACACTGTGGAGAGGT-------------GCATGGT i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 476520 61 - 608964 CCCAAGCACTAAAGCTAGACCCTGCTGCG----------ATGAGGCAGATAGTATAGAGAAGCA------------GCATGGT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65472627 67 - 98207768 -----GACCCAAAC------TACGCTTTGACT-----CTATCATGTAAATGCTATGTGTATGTACTACAGAGACACATGTGAC i mm10.chr16 C 0 I 2 s canFam3.chr33 29113338 61 + 31377067 -------CCAAGGCATG---AAGGCCAGACCTTCCAGTTATAATGCGGATACTGCAGGAAAGTA------------GCACGGT i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3949131 61 + 6579706 CTGAAGTCCCAAAACTGAATCTTCCAGTT----------ATAATGCAGGTCCTACAAAGAAGTC------------ACAGGGT i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 35607 122 - 3732694 I e panTro5.chr3 200177980 896 + 202621043 I a score=769664.000000 s hg38.chr3_KI270779v1_alt 191159 94 + 205312 CCCCCAACAGT-CCCTCCAGCTCTGGGTGGACGAGCTGACCCTGTTCTTTCCT---------------------GGAGGTAAGAAAATCATAAAGGTAAAGAGTCATGTGGAGCAT s panPan2.chrUn_NW_014024201v1 135298 94 + 190779 CCCCCAACAGT-CCCTCCAGCTCTGGGTGGACGAGCTGACCCTGTTCTTTCCT---------------------GGAGGTAAGAAAATCATAAAGGTAAAGAGTCATGTGGAGCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 25835 93 - 189199 CCCCCAACAGT--CCTCCAGCTCTGGATGGACGAGCTGATCCTGTTCTTCCGT---------------------GGAGGTAAGAAAATCATAAAGGTAAGGAGGCATGTGGAGCAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943853 94 + 123690457 CCCCCAACAGT-CCCTCCAGCTCTGGATGGGCGAGCCGATCCTGTTCTTTTCT---------------------GGAGGTAAGAAAATCATGAAGGTAAAGAGGGATGTGGAGCAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518663 90 + 204787373 CCCCTAACAGT-CCCTCCAGCTC----TGGATGAGCTGATCCTGTTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124089 90 + 192460366 CCCCTAACAGT-CCCTCCAGCTC----TGGATGAGCTGATCCTGTTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610481 90 + 19675229 CCCCTAACAGT-CCCTCCAGCTC----TGGATGAGCTGATCCTGTTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542849 90 + 16847902 CCCCTAACAGT-CCCTCCAGCTC----TGGATGAGCTGATCCTGTTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473583 90 - 91754291 CCCCTAACAGT-CCCTCCAGCTC----TGGATGAGCTGATCCTGTTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657708 90 - 1977891 CCCCTAACAGT-CCCTCCAGCTC----TGGATGAGCTGATCCTGTTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521524 93 + 7796314 GCCA-AACAGT-CCTTCCAGCTCTGGATGGATGAGCTGATCCTGCTCTTTCCT---------------------GGAGGTAAGAAAGTCATAAAGGTAAAGAGGGATGTGGAGCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985243 93 - 74750902 -CCCCATCAGT-CCCTCCAGCTCTTGATGGATGAGCTGACCCTGTTCTTTCCT---------------------GGGAGCAAGAAAGTTGTAAAGGTAAAGAGGGCTGTGGCGCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503018 71 + 17725628 -CCCCGTCCGT-CCCTCCAGCTCTTGATGGATGAGCTGACCCTGCTCT-------------------------------------AGTC------GTAAAGAGGGGTGTGGCGCAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478390 93 - 6778120 -CCCCGTCAGT-CCCTCCAGCTCTTGATGGATGAGCTGATCCTGTTCTTTCCC---------------------GGGAGTAAGAAAGTCGTAAAGGTAAAGAGGGGCATGGCGCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35729 94 - 3732694 CCCCCATCAGT-CCCTCCAGCTCATGATGGATGAGCTGACCCTGTTCTTTCCT---------------------GGGAGTAAGAAAGTCGTAAAGGTAAAGAGGGGTGTGGCACAT i aotNan1.NW_018507959v1 I 122 C 0 s otoGar3.GL873829 476581 72 - 608964 GTCCCATCAGTCCCCTCCATCTTGGTGTGGACAAG--------------------------------------------TAAGAAACGCATAAAGGTAAAGAAGGATTTGGGGAAC i otoGar3.GL873829 C 0 I 456 s mm10.chr16 65472696 79 - 98207768 -TCCAGGCA---CCTTCCACCTGATTATGAACAAAGTTACCTCATTGTTTT-T---------------------AGGAGCGGGAAAACCAT-ATGGTAGAGAAGGA---------- i mm10.chr16 I 2 C 0 s canFam3.chr33 29113400 93 + 31377067 TCTCTATCAAT-CCTTTTACCTCCGCATGGATGAGCCGATCCCATTCTCTCCC---------------------GGGAGCAGGAAATTCATAAAGGCAAAGGGGGATTTCAGGCA- i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3949192 103 + 6579706 -------------ATCCCCACTCTATGTGGACAAGTTGATCCCATTCTTTTCCTGGGGGGGGGGGGGGTGTAGAGGGGAGGGGGGAACCAGAAAGATAAAGAGGAACTTCGGGAAC i dasNov3.JH569502 C 0 C 0 e panTro5.chr3 200177980 896 + 202621043 I a score=291792.000000 s hg38.chr3_KI270779v1_alt 191253 32 + 205312 CCTGTGGGCGC--------------------------CTGGACGGGGCAGCAGGAGGG s panPan2.chrUn_NW_014024201v1 135392 32 + 190779 CCTGTGGGCGC--------------------------CTGGACGGGGCAGCAGGAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 25928 32 - 189199 CCTGCGGGCGC--------------------------CTGGACGGGGCAGCAGGAGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943947 32 + 123690457 CCTGTGGGCGC--------------------------CTGGACAGGGCAGCAGGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518753 58 + 204787373 CCTGTGGGCGCCTGGGCAGGGCAGCAGGAGGGCACTACTGGGCAGGGCAGCAGGAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124179 58 + 192460366 CCTGTGGGCGCCTGGGCAGGGCAGCAGGAGGGCACTACTGGGCAGGGCAGCAGGAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610571 58 + 19675229 CCTGTGGGCGCCTGGGCAGGGCAGCAGGAGGGCACTACTGGGCAGGGCAGCAGGAGGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542939 32 + 16847902 CCTGTGAGCGC--------------------------CTGGGTAGGGCAGCAGGAGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473673 32 - 91754291 CCTGTGGGCGC--------------------------CTGGGCAGGGCAGCAGGAGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657798 32 - 1977891 CCTGGGGGCGC--------------------------CTGGGTAGGGCAGCAGGAGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521617 32 + 7796314 CCTGTGGGTGC--------------------------CTGGGCAGGGCACCAGGAGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985336 32 - 74750902 CCTGTGGGCAC--------------------------CTGAACAGGGCAGCAGGAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503089 31 + 17725628 CCTGTGGGCAC--------------------------CTG-GCAGGGCGGCAGGAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478483 31 - 6778120 CCTGTGGGCAC--------------------------CTG-GCAGGGCAGCAGGAGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35823 32 - 3732694 CCTGAGGGCAC--------------------------CTGGACAGGGCAGCAGGAGGG i aotNan1.NW_018507959v1 C 0 I 16 s mm10.chr16 65472775 30 - 98207768 --TGTAAGTAC--------------------------CTTGACAGGGCAACAGGAAGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29113493 29 + 31377067 ---GAGAGTAT--------------------------CTAGACAGAACAGGAGGAGGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3949295 26 + 6579706 ------GGCAC--------------------------CTGGACAAGATAGAAGGAGGG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e panTro5.chr3 200177980 896 + 202621043 I a score=187175.000000 s hg38.chr3_KI270779v1_alt 191285 23 + 205312 ACCTACTGCAGGGAATTCGCAGA s panPan2.chrUn_NW_014024201v1 135424 23 + 190779 ACCTACTGCAGTGAATTCGCAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 25960 23 - 189199 ACCTACTGCAGGGAATTCGCAGA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120943979 23 + 123690457 ACATACTGAAGGGAATTTGCAGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518811 23 + 204787373 CACTACTGGAGGGAATTCGCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124237 23 + 192460366 CACTACTGGAGGGAATTCGCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610629 23 + 19675229 CACTACTGGAGGGAATTCGCAGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542971 23 + 16847902 CACTACTGGAGGGAATTCGCAGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473705 23 - 91754291 CACTACTGGAGGGAATTCGCAGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657830 23 - 1977891 CACTACTGGAGGGAATTCGCAGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521649 23 + 7796314 CACTACTGGAGGGAATTTGCAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985368 23 - 74750902 CACTGCCGAAGGGAGTCTGCAGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503120 23 + 17725628 CACTGCTGAAGGGAGTTTGCAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478514 23 - 6778120 CACTGCTGAAGGGAGTTTGCAGA i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65472805 23 - 98207768 TGTCACTGAAAACAGCTTGCATA i mm10.chr16 C 0 C 0 s canFam3.chr33 29113522 23 + 31377067 TATCACTGAAGAGAATTTACAGA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3949321 23 + 6579706 TATCAATGAAGAGAATTTACACA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e aotNan1.NW_018507959v1 35855 16 - 3732694 I e panTro5.chr3 200177980 896 + 202621043 I a score=187467.000000 s hg38.chr3_KI270779v1_alt 191308 33 + 205312 CACCAAGGCCCAGCTTGGCCTTCGTGATCATTT s panPan2.chrUn_NW_014024201v1 135447 33 + 190779 CACCAAGGCCCAGCTTGGCCTTCGTGATCATTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 25983 33 - 189199 AACCAAGGCCCAGCTTGGCCTTCGTGATCATTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944002 33 + 123690457 CACCAAGGCCCAGCTTGGCCTTCCTGATCAttt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518834 33 + 204787373 CACCAAGGCCCAGCCTGGCCTTTGTGATCAttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124260 33 + 192460366 CACCAAGGCCCAGCCTGGCCTTTGTGATCAttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610652 33 + 19675229 CACCAAGGCCCAGCCTGGCCTTTGTGATCAttt i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 542994 33 + 16847902 CACCAAGGCCCAGCTTGGCCTTTGTGATCATTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473728 33 - 91754291 CACCAAGGCCCAGCTTGGCCTTTGTGATCAttt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657853 33 - 1977891 CACCAAGGCCCAGTTTGGCCTTTGTGATCATTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521672 33 + 7796314 CACCAAGGCCCAGCTTGGCCTTTGTGATCAttt i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985391 21 - 74750902 C-CCAGG--CCAGCGTGGCTCCTG--------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503143 21 + 17725628 C-CCAGG--CCAGCGTGGCCTCTG--------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478537 21 - 6778120 C-CCAGG--CCAGCGTGGCCTCTG--------- i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65472828 26 - 98207768 ------GGTACA-CTTGACCTTAGGGGTCATTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29113545 33 + 31377067 TACCAAGGCCCAACTTGGTCTTCCTAATCATTT i canFam3.chr33 C 0 I 48 e otoGar3.GL873829 476653 456 - 608964 I e dasNov3.JH569502 3949344 0 + 6579706 C e aotNan1.NW_018507959v1 35855 16 - 3732694 I e panTro5.chr3 200177980 896 + 202621043 I a score=5918.000000 s hg38.chr3_KI270779v1_alt 191341 3 + 205312 TGC--------- s panPan2.chrUn_NW_014024201v1 135480 3 + 190779 TGC--------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26016 3 - 189199 TGC--------- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944035 3 + 123690457 tgt--------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518867 3 + 204787373 tgc--------- i rheMac8.chr2 C 0 I 2 s macFas5.chr2 124293 3 + 192460366 tgc--------- i macFas5.chr2 C 0 I 3 s macNem1.NW_012014355v1 610685 3 + 19675229 tgc--------- i macNem1.NW_012014355v1 C 0 I 6 s cerAty1.NW_012004056v1 543027 3 + 16847902 Tgt--------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473761 3 - 91754291 tgc--------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657886 3 - 1977891 TGC--------- i manLeu1.NW_012102020v1 C 0 I 16 s colAng1.NW_012118932v1 521705 3 + 7796314 tgc--------- i colAng1.NW_012118932v1 C 0 I 1 s mm10.chr16 65472854 12 - 98207768 TTTTATGACAGC i mm10.chr16 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e dasNov3.JH569502 3949344 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I e aotNan1.NW_018507959v1 35855 16 - 3732694 I e cebCap1.NW_016107444v1 478558 0 - 6778120 C e calJac3.chr17 985412 0 - 74750902 C e saiBol1.JH378146 503164 0 + 17725628 C e panTro5.chr3 200177980 896 + 202621043 I a score=15731.000000 s hg38.chr3_KI270779v1_alt 191344 16 + 205312 -------ACtttttttttttttt s panPan2.chrUn_NW_014024201v1 135483 16 + 190779 -------ACtttttttttttttt i panPan2.chrUn_NW_014024201v1 C 0 I 2 s gorGor5.CYUI01000254v1 26019 15 - 189199 -------ACttttttttttttt- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944038 16 + 123690457 -------gctttttttttttttt i nomLeu3.chr11 C 0 I 5 s rheMac8.chr2 202518872 15 + 204787373 --------ttttttttttttttt i rheMac8.chr2 I 2 I 1 s macFas5.chr2 124299 15 + 192460366 --------ttttttttttttttt i macFas5.chr2 I 3 I 1 s macNem1.NW_012014355v1 610694 15 + 19675229 --------ttttttttttttttt i macNem1.NW_012014355v1 I 6 I 1 s chlSab2.chr15 473764 12 - 91754291 -----------tttttttttttt i chlSab2.chr15 C 0 I 1 s colAng1.NW_012118932v1 521709 15 + 7796314 --------ttttttttttttttt i colAng1.NW_012118932v1 I 1 I 1 s calJac3.chr17 985412 10 - 74750902 ------------Gtttgttttg- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503164 10 + 17725628 ------------ttttgttttg- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478558 10 - 6778120 ------------ttttgttttg- i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65472866 21 - 98207768 TCTTTTCAGATTTAttatttt-- i mm10.chr16 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e dasNov3.JH569502 3949344 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I e aotNan1.NW_018507959v1 35855 16 - 3732694 I e manLeu1.NW_012102020v1 657889 16 - 1977891 I e cerAty1.NW_012004056v1 543030 0 + 16847902 C e panTro5.chr3 200177980 896 + 202621043 I a score=28411.000000 s hg38.chr3_KI270779v1_alt 191360 5 + 205312 gagat s panTro5.chr3 200178876 5 + 202621043 gagac i panTro5.chr3 I 896 C 0 s panPan2.chrUn_NW_014024201v1 135501 5 + 190779 gagac i panPan2.chrUn_NW_014024201v1 I 2 C 0 s gorGor5.CYUI01000254v1 26034 5 - 189199 gagac i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944059 5 + 123690457 gagac i nomLeu3.chr11 I 5 C 0 s rheMac8.chr2 202518888 5 + 204787373 gagac i rheMac8.chr2 I 1 C 0 s macFas5.chr2 124315 5 + 192460366 gagac i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 610710 5 + 19675229 gagac i macNem1.NW_012014355v1 I 1 C 0 s chlSab2.chr15 473777 5 - 91754291 gaaac i chlSab2.chr15 I 1 C 0 s colAng1.NW_012118932v1 521725 5 + 7796314 tacac i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 985422 5 - 74750902 gagac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503174 5 + 17725628 gagat i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478568 5 - 6778120 gagat i cebCap1.NW_016107444v1 C 0 C 0 s mm10.chr16 65472887 5 - 98207768 aaaat i mm10.chr16 C 0 I 251 e otoGar3.GL873829 476653 456 - 608964 I e dasNov3.JH569502 3949344 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I e aotNan1.NW_018507959v1 35855 16 - 3732694 I e manLeu1.NW_012102020v1 657889 16 - 1977891 I e cerAty1.NW_012004056v1 543030 0 + 16847902 C a score=25873.000000 s hg38.chr3_KI270779v1_alt 191365 6 + 205312 ggagtc s panTro5.chr3 200178881 4 + 202621043 --agtc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135506 4 + 190779 --agtc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26039 6 - 189199 ggagtc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944064 6 + 123690457 ggagtc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518893 6 + 204787373 ggagtc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124320 6 + 192460366 ggagtc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610715 6 + 19675229 ggagtc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 473782 6 - 91754291 agagtc i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 521730 6 + 7796314 ggagtc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985427 6 - 74750902 atagtc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503179 6 + 17725628 gtcatc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478573 6 - 6778120 gtcgtc i cebCap1.NW_016107444v1 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e mm10.chr16 65472892 251 - 98207768 I e dasNov3.JH569502 3949344 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I e aotNan1.NW_018507959v1 35855 16 - 3732694 I e manLeu1.NW_012102020v1 657889 16 - 1977891 I e cerAty1.NW_012004056v1 543030 0 + 16847902 C a score=525603.000000 s hg38.chr3_KI270779v1_alt 191371 84 + 205312 ttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccgggttcacgccattcccctg s panTro5.chr3 200178885 84 + 202621043 ttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccgggttcacgccattcccctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135510 84 + 190779 ttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccgggttcacgccattcccctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26045 84 - 189199 tcgctctgtcgctcaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcctgggttcacgccattcccctg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944070 84 + 123690457 ttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccaggttcaagcaattctcctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518899 84 + 204787373 tcactctgtcacgcaggttggagtgcggtggcaccatctctattcactgcaagctccgcctcccaggttcaagcaattcccccg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124326 84 + 192460366 tcactctgtcatgcaggttggagtacggtggcaccatctctattcactgcaagctccgcctcccaggttcaagcaattcccccg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610721 84 + 19675229 tcactctgtcacgcaggttggagtgcggtggcaccatctctattcactgcaagctccgcctcccaggttcaagcaattcccctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543030 16 + 16847902 --------------------------------------------------------------------tcaagcaattccccca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473788 84 - 91754291 tcgctctgtcacccaggttggagtgcggtggcaccatctctattcactgcaagctccacctcccaggttcaagcaattcccccg i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 521736 84 + 7796314 tcgttctgtcacccaggttggagtgcggtggcaccatcttggctcactgcaagctccgcctcccaggttcaagcaattccccca i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985433 84 - 74750902 ttgctctgtcgctgaggctggagtgcaatggcacaaccttggctcaccgcaacctctgcctctggagtccaagccattcccctg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503185 83 + 17725628 ttgctctgtcactgaggttggagtgcaatggcacaatcttggctcaccgcaacctctgcctctgggggccaagcgattcccc-g i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478579 84 - 6778120 ttgctctgtcgctgaggctggagtgcaatggcacaaccttggctcactgcaacctctgcctctgggggctgagcgattcccctg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35871 83 - 3732694 ttgctctgtcgctgaggctggagtgcaatggcacaaccttggctcactgcaacctctgcctctgg-gtcccagcgattcccctg i aotNan1.NW_018507959v1 I 16 C 0 e otoGar3.GL873829 476653 456 - 608964 I e mm10.chr16 65472892 251 - 98207768 I e dasNov3.JH569502 3949344 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I e manLeu1.NW_012102020v1 657889 16 - 1977891 I a score=238389.000000 s hg38.chr3_KI270779v1_alt 191455 22 + 205312 cctcagcctccctagtagctgg s panTro5.chr3 200178969 22 + 202621043 cctcagcctccctagtagctgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135594 22 + 190779 cctcagcctccctagtagctgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26129 22 - 189199 cctcagcctccctagtagctgg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944154 22 + 123690457 cctcggcctcccgaatagctgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202518983 22 + 204787373 cctcagcctcccgagtagctgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124410 22 + 192460366 cctcagcctcccgagtagctgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610805 22 + 19675229 cctcagcctcccgagtagctgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543046 22 + 16847902 cctcagcctcccgagtagctgg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473872 22 - 91754291 cctcagcctcccgagtagctgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657905 22 - 1977891 cctcagcctcctgagtagctgg i manLeu1.NW_012102020v1 I 16 C 0 s colAng1.NW_012118932v1 521820 22 + 7796314 cctcagcctcccgagtagctgg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985517 22 - 74750902 cctcagcttcccgagtagctgg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503268 22 + 17725628 cctcagcctcccgagtagctgg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478663 22 - 6778120 cctcagcctcccgagtagctgg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35954 22 - 3732694 cctcagcctcccgagtagctgg i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e mm10.chr16 65472892 251 - 98207768 I e dasNov3.JH569502 3949344 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I a score=72623.000000 s hg38.chr3_KI270779v1_alt 191477 9 + 205312 ga-ctacagg s panTro5.chr3 200178991 9 + 202621043 ga-ctacagg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135616 9 + 190779 ga-ctacagg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26151 9 - 189199 ga-ctacagg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944176 9 + 123690457 ga-ctacagg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519005 10 + 204787373 gatttacagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124432 10 + 192460366 gatttacagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610827 10 + 19675229 gatttacagg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543068 10 + 16847902 gatttacagg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473894 10 - 91754291 gatttacagg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657927 10 - 1977891 gatttacagg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521842 10 + 7796314 gatttacggg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985539 10 - 74750902 gatttacagg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503290 9 + 17725628 ga-ttacagg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478685 9 - 6778120 ga-ttacagg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35976 9 - 3732694 ga-ttacagg i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3949344 9 + 6579706 GA-CTCCAAG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e mm10.chr16 65472892 251 - 98207768 I e canFam3.chr33 29113578 48 + 31377067 I a score=117423.000000 s hg38.chr3_KI270779v1_alt 191486 14 + 205312 cacctgccaccacg s panTro5.chr3 200179000 14 + 202621043 cacctgccaccacg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135625 14 + 190779 cacctgccaccacg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26160 14 - 189199 cacctgccaccacg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944185 14 + 123690457 tgcccgccaccatg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519015 14 + 204787373 tgcccaccaccacg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124442 14 + 192460366 tgcccaccaccacg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610837 14 + 19675229 tgcccaccaccacg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543078 14 + 16847902 tgcccaccaccaca i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473904 14 - 91754291 tgcccaccaccaca i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657937 14 - 1977891 tgcccaccaccaca i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521852 14 + 7796314 tgcccaccaccatg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985549 14 - 74750902 cacctgccactgcg i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503299 14 + 17725628 cacccaccaccatg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478694 14 - 6778120 cacccaccaccacg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35985 14 - 3732694 cacccgccaccaca i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e mm10.chr16 65472892 251 - 98207768 I e dasNov3.JH569502 3949353 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I a score=794337.000000 s hg38.chr3_KI270779v1_alt 191500 88 + 205312 cccggctaa------------ttttttttgtatttttagtagggacgaggtttcaccatgttggccaggttggtctcgaacccctgaactcagatgatcc s panTro5.chr3 200179014 88 + 202621043 cccggctaa------------ttttttttgtatttttagtagggacgaggtttcaccacgttggccaggttggtctcgaacccctgacctcagatgatcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135639 87 + 190779 cccggctaa-------------tttttttgtatttttagtagggacgaggtttcaccacgttggccaggttggtctcgaacccctgacctcagatgatcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26174 88 - 189199 cccggctaa------------ttttttttgtatttttagtagggacgaggtttcaccatgttggccaggttggtctcgaacccctgacctcagatgatcc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944199 85 + 123690457 cctggctaa-------------tttttttgtatttttagtagagacgggagttcaccatgttagccaggatggtctcgatctcctgacctc--atgatcc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519029 88 + 204787373 cccggctaa------------ttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124456 89 + 192460366 cccggctaa-----------tttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610851 89 + 19675229 cccggctaa-----------tttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatcc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543092 89 + 16847902 cctggctaa-----------tttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatcc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 473918 89 - 91754291 cctggctaa-----------tttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 657951 89 - 1977891 cctggctaa-----------tttttttttgtatttttagtagggacgaagtttcaccatgttggccaggctggtctcgaactccttacctcagatgatcc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521866 100 + 7796314 cctggctacttttttttttttttttttttgtatttttagtagggacgaggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatcc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985563 69 - 74750902 cctggctaa------------ttttttttgtat-----------------tttcaccatgttgaccagactggtctcgaactcctgacctc--gcaatct i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503313 88 + 17725628 cctggctca------------tgtttcttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaactcctgatctcaggcaatct i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478708 88 - 6778120 cctggccaa------------ttttttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctgacctcaggcgatct i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 35999 88 - 3732694 cgtggctaa------------ttttctttgtatttttagtagggatggcatttcaccatgttggccagtctggtctcgaactcctgacctcaggcaatct i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65473143 74 - 98207768 tctgtttat------------ttccttttgagtt----gatgaaacggtgggtagctgtctagcccaggctggcctggaaatcttg----------attc i mm10.chr16 I 251 C 0 e otoGar3.GL873829 476653 456 - 608964 I e dasNov3.JH569502 3949353 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I a score=402227.000000 s hg38.chr3_KI270779v1_alt 191588 40 + 205312 gcccgccttggcctcccaaagtgctgggattacaggcgtg s panTro5.chr3 200179102 40 + 202621043 gcccgccttggcctcccaaagtgctgggattacaggcgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135726 40 + 190779 gcccgccttggcctcccaaagtgctgggattacaggcgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26262 40 - 189199 gcccgccttggcctcccaaagtgctgggattacaggcgtg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944284 40 + 123690457 acccacctcagcctcccaaagtgctgggattacaggcgtg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519117 40 + 204787373 gcccgcctcggcctcccaaagtgctaggagtacaggcgtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124545 40 + 192460366 gcccgcctcggcctcccaaagtgctaggagtacaggcgtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610940 40 + 19675229 gcccgcctcggcctcccaaagtgctaggagtacaggcgtg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543181 40 + 16847902 acccgcctcggccttccaaagtgctgggagtacaggcgtg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474007 40 - 91754291 gcccgcctcggccttccaaagtgctgggagtacaggcgtg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658040 40 - 1977891 gcccgcctcggccttccaaagtgctgggagtacaggcgtg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 521966 40 + 7796314 acctgccccggcctcccgaagtgctgggagtacaggcgtg i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985632 38 - 74750902 gcccacctc--cctcccaaagtgctgggattacaggtgta i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503401 40 + 17725628 gcccccctcggcctcccacaatgctgggattacaggtatg i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478796 40 - 6778120 gcccacctcggcctcccgaagtgctgggattacaggtgtg i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36087 40 - 3732694 gcccacctcggcctcccaaagtgctggggtgacaggtgtg i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65473217 39 - 98207768 tcctgcctcagcct-ctacagtgttgggatttcaggaatg i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3949353 19 + 6579706 GTCCAATTTGACCTTCTAA--------------------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 476653 456 - 608964 I e canFam3.chr33 29113578 48 + 31377067 I a score=95327.000000 s hg38.chr3_KI270779v1_alt 191628 18 + 205312 agccact-gcac----ccggc-------cC s panTro5.chr3 200179142 18 + 202621043 agccact-gcac----ccggc-------cC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135766 18 + 190779 agccact-gcac----ccggc-------cC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26302 18 - 189199 agccact-gcac----ctggc-------cC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944324 18 + 123690457 agccacg-gcac----ccggc-------cC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519157 21 + 204787373 agccacc-acgcccggccTG--------CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124585 21 + 192460366 agccacc-acgcccggccTG--------CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 610980 21 + 19675229 agccacc-acgcccggccTG--------CT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543221 17 + 16847902 agccacc-gcgc----cctg--------cc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474047 17 - 91754291 agccacc-gcgc----cctg--------cc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658080 17 - 1977891 agccacc-gcac----cctg--------cc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522006 17 + 7796314 agccacc-gcgc----cctg--------cc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985670 18 - 74750902 agccacc-acac----ccagc-------TC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503441 18 + 17725628 agccacc-acgc----ctggc-------TC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478836 17 - 6778120 agccacc-acgc----c-GGC-------TC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36127 18 - 3732694 agccacc-acgc----ccggc-------TC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477109 26 - 608964 AGCCACTGGGGC----CCAGCTTGGCCTTC i otoGar3.GL873829 I 456 C 0 s mm10.chr16 65473256 18 - 98207768 tgctacc-atga----ctggc-------tc i mm10.chr16 C 0 I 246 e dasNov3.JH569502 3949372 0 + 6579706 C e canFam3.chr33 29113578 48 + 31377067 I a score=445718.000000 s hg38.chr3_KI270779v1_alt 191646 45 + 205312 GTGGTCATTTTTC--TGTCAGCTCTTGCTCGTGGGTCC-CCCCATTAC s panTro5.chr3 200179160 45 + 202621043 GTGGTCATTTTTC--TGTCAGCTCTTGCTCGTGGGTCC-CCCCATTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135784 45 + 190779 GTGGTCATTTTTC--TGTCAGCTCTTGCTCGTGGGTCC-CCCCATTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26320 45 - 189199 GTGGTCATTTTTC--TGTCAGCTCTTGCTCGTGGGTCC-CCCCATTAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944342 47 + 123690457 GTGGTCATTTTTCTATGTCAGCTCTCGCTCGTGGGTCC-CCCCATTAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519178 47 + 204787373 GTGGTCATTTTTCTATGTCAGCTCTTGCTTGTGGGTTC-CCCCATTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124606 47 + 192460366 GTGGTCATTTTTCTATGTCAGCTCTTGCTTGTGGGTTC-CCCCATTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611001 47 + 19675229 GTGGTCATTTTTCTATGTCAGCTCTTGCTTGTGGGTTC-CCCCATTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543238 47 + 16847902 GTGGTCATTTTTCTATGTCAGCTCTTGTTTGTGGGTTC-CCCCATTAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474064 47 - 91754291 GTGGTCATTTTTCTATGTCAGCTCTTGTTTGTGGGTTC-CCCTATTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658097 47 - 1977891 GTGGTCATTTTTCTATGTCAGCTCTTGTTTGTGGGTTC-CCCCATTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522023 47 + 7796314 GTGGTCATTTTTCTCTGTCAGCTCTTGCTTGTGGGTTC-CCCCATTGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985688 43 - 74750902 GTGATCATTTTTC--TGTCAGCTCTCGCTCATGG--TC-CCCCATTAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503459 43 + 17725628 ATGATCATTTTTC--TGTCAGCTCTTGCTCATGG--TC-CCCCATTAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478853 42 - 6778120 GTGATCATTTTTC--TGTCAGCTCTCCCTCCTGG---A-CCCCATTAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36145 43 - 3732694 GTGATCATTTTTC--TGTCAGCTCTCACCCATGG--TC-CCCCAGTAC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477135 48 - 608964 TTCATTGTTCTTCTGTGTCAGTTCTTGTCCCCGAGTTCTTCCTATTCC i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3949372 44 + 6579706 ----TCATTTTTCTGTGTCAGTTCTTGATGATGGGTTCTCCCTATTAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65473274 246 - 98207768 I e canFam3.chr33 29113578 48 + 31377067 I a score=52317.000000 s hg38.chr3_KI270779v1_alt 191691 10 + 205312 CTTTCC-ACAG s panTro5.chr3 200179205 10 + 202621043 CTTTCC-ACAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135829 10 + 190779 CTTTCC-ACAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26365 10 - 189199 CTTTCC-ACAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944389 10 + 123690457 CTTTCC-ACAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519225 9 + 204787373 CTTTCC-A-AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124653 9 + 192460366 CTTTCC-A-AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611048 9 + 19675229 CTTTCC-A-AG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543285 9 + 16847902 CTTTCC-A-AG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474111 9 - 91754291 CTTTCC-A-AG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658144 9 - 1977891 CTTTCC-A-AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522070 10 + 7796314 CTTTCCTC-AG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985731 10 - 74750902 CTTTCC-ATAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503502 10 + 17725628 CTTTCC-GTAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478895 10 - 6778120 CTTTCC-ATAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36188 10 - 3732694 ATTTCC-ATAT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477183 10 - 608964 CTTTCT-GGAT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473520 10 - 98207768 TTGTTC-ATTT i mm10.chr16 I 246 C 0 s dasNov3.JH569502 3949416 10 + 6579706 CTTGCT-GTAT i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29113578 48 + 31377067 I a score=811963.000000 s hg38.chr3_KI270779v1_alt 191701 76 + 205312 GTTTTGT-TTGGTGAC----GCTTTCAGGACAACAGTTTTCCATCTCTAGAGGAGAAA-GGAGCA-TCCAGGTGAGACCAAAC s panTro5.chr3 200179215 77 + 202621043 GTTTTGT-TTGGTGACAACAGTTTTCAGGACAACAGTTTTCCATCTCTAGAGGAGAAA-GGAGCA-TCCAGGTGAGACCA--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135839 77 + 190779 GTTTTGT-TTGGTGACAACAGTTTTCAGGACAACAGTTTTCCATCTCTAGAGGAGAAA-GGAGCA-TCCAGGTGAGACCA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26375 76 - 189199 GTTTTGT-TTGGTGAC----GCTTTCAGGACAACAGTTTTCCATCTCTAGAGGAGAAA-GGAGCA-TCCAGGTGAGACCAAAC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944399 76 + 123690457 GTTTTGT-TTGGTGAC----GCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGATCAAAC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519234 76 + 204787373 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGACCAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124662 76 + 192460366 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGACCAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611057 76 + 19675229 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCTATCTCTAGAGGAGACA-GAAGCA-TCCAGGTGAGACCAAAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543294 76 + 16847902 ATTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAAAGGAGAAA-GAAGCA-TCCAGGTGAGATCAAAC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474120 76 - 91754291 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGATCAAAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658153 76 - 1977891 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGATCAAAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522080 76 + 7796314 GTTGTGT-TTAGTGAC----GCTTTCGGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGACCAAAC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985741 76 - 74750902 GTTTTGT-TTGGTGAC----GCTTTCA-AACGACACTTTTCCATCTATAGGGGAGAAA-GGAGCATTCCAGGTGAGACCAAAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503512 75 + 17725628 GTTTTGT-CTGGTGAC----GCTTTCA-AACTACGATTTTCCATCTAT-GGGGAGAAA-GAAGCATTCCAGGTGAGACCAAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 478905 76 - 6778120 GTTTTGT-TTGGTGAC----GCTTTCA-AACTGCAGTTTTCCATCTACAGGGGAGAAA-GAGGCATTCTAGGTGAGACCAAAC i cebCap1.NW_016107444v1 C 0 I 215 s aotNan1.NW_018507959v1 36198 76 - 3732694 GTTTTGT-TTGGTGAC----GCTTTCA-AACTACAGTTTTCCATCTATAGGGGAGAAG-GAAGCATTCCGGGTGAGACCAAAC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477193 66 - 608964 GTTTTGT-TCAGTGAC----GATCTCAGGACTACAGCTTCCCAGCTGTGAGTGG------------TTCAGGTTAAACTAAAG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473530 75 - 98207768 GTGTTGTCTTAATGAC----ACTCTCTAGAGCACACCTTCTCATCCACAAAAGCCAAA---ACCC-TTCAGGTTACACTGAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29113626 77 + 31377067 GTTTTGT-TTGGTGAC----ACTCTCTGGACTGCAG-TGTCCATCTACAGAGTAGAAAAAAAGCATTACAGGTCAGACCAAAG i canFam3.chr33 I 48 C 0 s dasNov3.JH569502 3949426 77 + 6579706 GCGTTGT-TCGGTGAT----GCTCTCTGCTCTACAGTTTTCCATCTACGGAGGACAGA-AATGCATTCCAGGTTGGACAAAAG i dasNov3.JH569502 C 0 C 0 a score=1692234.000000 s hg38.chr3_KI270779v1_alt 191777 221 + 205312 TAAGCGCTGGACATCTTGTTGACC-GAA---CACAGGTAGCTGACCTCTTTCCCATGCCA------GGAAGGCCAGAGGCACACAGCGCTCTCCGGAAGCTGCTGTGACGGCCGAGACTCCAGGAGGGCGTTAc---aaacc-----tgggcttg-atcc-cagctctgccaccgcgtc--ac----cacaaagtcacagcctcttcgagct--gttttcctcgttcacctgtaaaatggggata---acac s panTro5.chr3 200179292 161 + 202621043 ----------------------------------------------------------------------GGCCAGAGGCACACAGCGCTCTCTGGAAGCTGCTGTGACGGCCGAGACTCCAGGAGGGCGTTAc---aaacc-----cgggcttg-atcc-cagctctgccaccgcgtc--gc----cacaaagtcacagcctcttcgagct--gctttcctcgttcacctgtaaaatggggata---acac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 135916 161 + 190779 ----------------------------------------------------------------------GGCCAGAGGCACACAGCGCTCTCCGGAAGCTGCTGTGACGGCCGAGACTCCAGGAGGGCGTTAc---aaacc-----cgggcttg-atcc-cagctctgccaccgcgtc--gc----cacaaagtcacagcctcttcgagct--gttttcctcgttcacctgtaaaatggggata---acac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26451 220 - 189199 TAAGCGCTGGACATCTTGTTGACC-GAA---CACAGGTAGCTGACCTCTTTCCAATGCCA------GGAAGGCCAGAGGCACACAGCGCTCTCCAGAAGCTGCTGTGATGGCCGAGACTCCAGGAGGGCGTTAc---aaacc-----cgggcttg-atcc-cagctctgccaccgcgtc--gc----cacaaagtcacagcctcttcgagct--gttttcctcattca-ctgtaaaatggggata---acgc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944475 224 + 123690457 TAAGAGCTGGACATCTTGTTGACC-GAA---CACAGGTAGCTGACA-CTTTCCAATGCCA------GGAAGGCCAGAGGCGCAGAGTGCTCTCCGGAGGCTGCTGTGATGGCCCAGACTCCAGGAAGGCGTTAc---aaacc-----cgggctta-atcc-cagctctgccactgtgtc--gcccgacacaaagtcacggcctcttcgagct--gttttccttgttcatctgtaaaatggggata---acac i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519310 219 + 204787373 TAAGAGTTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTGACCACTTTCCAATGCCA------GGAAGGCCAGAGGCC-----TTCTCTCTGGAGGCTGCTGTGATGGCCAGGACTCCAGGAGGGTGTTAc---aaacc-----caggctcg-atcc-cagctctgccactgagtc--gt----cacaaagtcacagccccttcgagct--gttttcctcattcatctgtaaaatggggataatgacac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124738 219 + 192460366 TAAGAGTTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTAACCACTTTCCAATGCCA------GGAAGGCCAGAGGCC-----TTCTCTCTGGAGGCTGCTGTGATGGCCAGGACTCCAGGAGGGTGTTAc---aaacc-----cgggctcg-atcc-cagctctgccactgagtc--gt----cacaaagtcacagccccttcgagct--gttttcctcgttcatctgtaaaatggggataatgacac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611133 219 + 19675229 TAAGAGTTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTGACCACTTTCCAATGCCA------GGAAGGCCAGAGGCC-----TTCTCTCTGGAGGCTGCTGTGATGGCCAGGACTCCAGGAGGGTGTTAc---aaacc-----cgggctcg-atcc-cagctctgccactgagtc--gt----cacaaagtcacagccccttcgagct--gttttcctcgttcatctgtaaaatggggataatgacac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543370 219 + 16847902 TAAGAGTTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTGACCACTTTCCAATGCCA------GGAAGGCCAGAGGCC-----TTCTCTCTGGAGGCTGCTGTAATGGCCAGGACTCCAGGAGGGTGTTAc---aaacc-----cgggctcg-atcc-cagctctgccaccgagtc--gt----cacaaagtcacagccccttcgagct--gttttcctcgttcatctgtaaaatggggacaatgacac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474196 219 - 91754291 TAAGAGTTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTGACCACTTTCCAATGCCA------GGAAGGCCAGAGGCC-----TTCTCTCTGGAGGCTGCTGTGATGGCTAGAACTCCAGGAAGGTGTTAc---aaacc-----cgggctcg-atcc-cagctctgccaccgagtt--gt----cacaaagtcacagccccttcgagct--gtcttcctcgttcatctgtaaaatggggataatgacac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658229 218 - 1977891 TAAGAGTTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTGACCACTTTCCAATGCCA------GGAAGGCCAGAGGCC-----TTCTCTCTGGAGGCTGCTGTGATGGCCAGGACT-CAGGAGGGTGTTAc---aaacc-----cgggctcg-atcc-cagctctgccaccgagtc--gt----cacaaagtcacagccccttcgagct--gttttcctcgttcatctgtaaaatggggataatgacac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522156 219 + 7796314 TAAGAGGTGGGCATCTTGCTGACC-GAA---CACAGGTAGCTGACCACTTTCCAATGCCA------GGAAGGCCACAGGCC-----TTCTCTCTGGAGGCTGCTGTGATGGCCAGGACTCCAGGAGGGTGTTAc---aaacc-----cgggctcg-atcc-cagctctgccaccgagtc--gt----cacaaagtcacagcccctttgagct--gttttcctcgctcatctgtaaaatggggctaatgacac i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 985817 211 - 74750902 TGGGAGCTGGGCATTGTATTGACC-AAA---CACAGGCAGCTGAGCACTTTCCAGTGCCA------GGAAGGCCAGAGGCGCAGAGCGACCTCCGGAGACTCCAA------------------GAGGGCGTTACa--aaacc-----tgggctcg-atcc-cagctctgccactgagtcaagt----cacaaagtcacagcctcttcgagctgagttttccttgttcatctgtgaaatggggataatagtgc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503587 214 + 17725628 CAGGAGCTGGACATTGTATTGACCGAAA---CACAGGCAGCTGAGCACTTTCCAGTGCAA------GGAGGGCCAGAGGCGCAGAGCGGTCTCCGGAGGCCGCAGT-----------------GACgac----cg--agactcccggtgtgctcg-atcc-catatctgccactgagtcaagt----cacaaagtcacagcctcgtcgagctgagctttcctcgttcatctgtgaaatggggataataatgc i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 36274 228 - 3732694 CGGGAGCTGGACATGGTATTGACC-AAA---CACAGGC-GCTGAGCACTTTCCAGTGCCA------GGAAGGCCAGAGGCGCAGAGCGGTCTCCGGAGGCTGCTGTGACGGCCGAGACTCCAGGAGGGCGTTACA--aaacc-----tgggctcg-atcc-cagctctgccaccgagtgaagt----cacaaagtcacagcctcttcgagctgagttttcctcgttcgtctgtgaaatggggataataacgc i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477259 201 - 608964 CAAGACTTAGCCATCTTGTTGCCC-TAA---CGCAGATAACTTTCCACTTTCCCATGCAA------GCAAGGCcaga-gtgcagagtattcttgggaggct------------------ctaattgtgcattggg--acact-----tgggcttg-atct-cagctctgtccttgag----gc----t----agacacgacctctttgagccttgtttacctcgtccatctgtgaaatggggataat-atgc i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473605 151 - 98207768 TAACAGCTGG------TGTTAACC-TCA---TA----------------------------------------CAGAGTTTCAGAGCATTC-CCAGAGGCTGA----------------Ccagg-------------acacc-----tggacttt-agctgtagctttgttacccaag---gt--------aagtcccagtatctttaagccttgtttttct----catctgaaaaatgggagtaataccac i mm10.chr16 C 0 C 0 s canFam3.chr33 29113703 218 + 31377067 TAAGAGTTGGACATATTGTTGACC-TGACCCCGCAGATAACCTCCCACTATCCAATGCAA------GGAAGACCAGAGGCACAAAATGTTCTTCGGAGGCCACTGCAGAGGCTGAGATTCC-GCTGggcattagg--acacc-----tgggcttgaatcc-cagttctgctccc-------ca----aactaagtcacagcctttttgaaccttattttcct----catctatgaaacagggata---atac i canFam3.chr33 C 0 I 473 s dasNov3.JH569502 3949503 219 + 6579706 TGAGAGTTGGACATTTTTTTGACC-TAA---CGCAGATGACCTTCCACTTCCCAATGCAAGGAAGCGGAAGGCCAGAGGCACAGAGTGTTCTCCAGAGGCTGCTATGGTGATCAAGATGCCAAGGGGGCATTAGGAAAAACC-----TGAGCTTC-ATtg-------tgtgacccga----gt----c---aagtcacaacttctttgaaccttgttttcct----catctctaaaat-gggataataacac i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 478981 215 - 6778120 I a score=464815.000000 s hg38.chr3_KI270779v1_alt 191998 59 + 205312 ctatctgaaaggttgtagggtgggagtgagcct-gtagatgctgaggggctGCGGGAGTA s panTro5.chr3 200179453 59 + 202621043 ctatctgaaaggttgtagggtgggagtgagcct-gtagatgctgaggggctGCGGGAGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136077 59 + 190779 ctatctgaaaggttgtagggtgggagtgagcct-gtagatgctgaggggctGCGGGAGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26671 58 - 189199 ctatctgaaa-gttgtagggtgggagtgagCCT-GTAGATGCTGAGGGGCTGCAGGAGTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944699 59 + 123690457 ctatctgaaaggttgtAGGGTGGGGGTGAGCCT-GTAGATGCTGAGGGGCTGCGGGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519529 59 + 204787373 ctatctgaaaggttgtAGGGTGGGAGTGAGCCT-GTAGATGCTGAGGGGCTGTGGGAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 124957 59 + 192460366 ctatctgaaaggttgtAGGGTGGGAGTGAGCCT-GTAGATGCTGAGGGGCTGTGGGAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611352 59 + 19675229 ctatctgaaaggttgtAGGGTGGGAGTGAGCCT-GTAGATGCTGAGGGGCTGTGGGAGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543589 59 + 16847902 ctatctgaaaggttgtAGGGTGGGAGTGAGGCT-GTAGATGCTTAGGGGCTGTGGGAGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474415 59 - 91754291 ctatctgaaaggttgtagggtgggagtgagcct-gtagatgctgaggggctgtggaaGTG i chlSab2.chr15 C 0 I 200 s manLeu1.NW_012102020v1 658447 59 - 1977891 ctatctgaaaggttgtAGGGTGGGAGTGAGGCT-GTAGATGCTTAGGGGCTGTGGGAGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522375 59 + 7796314 ctatctgaaaggttgtAGGGTGGGAGTGAGGCT-GTAGATGCTGAGGGGCTGTGGGAGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986028 59 - 74750902 ctacctgaaaggttgtagggagggaatgagtct-acaggtgctgaggtgctttgGGAGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503801 29 + 17725628 ct------------------------------T-ACAGGTGCTGAGGTGTTCCGGGAGTG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 36502 59 - 3732694 ctacctgaaaggttgtagggtgggaatgagtcc-gcaggtgctgaggtgctttgggagtg i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477460 31 - 608964 ctacccaaaaggccgt-----------------------------gaggctgactgagca i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65473756 59 - 98207768 ttaccagaaaagctataagactgaaatgagctt-atagatgagagggtgccttacaaaTG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3949722 43 + 6579706 ctacccacaagatcaggaggctgaaatgaacttaacaggtagc----------------- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29113921 473 + 31377067 I e cebCap1.NW_016107444v1 478981 215 - 6778120 I a score=6189.000000 s hg38.chr3_KI270779v1_alt 192057 1 + 205312 T s panTro5.chr3 200179512 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136136 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26729 1 - 189199 T i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944758 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519588 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125016 1 + 192460366 T i macFas5.chr2 C 0 I 154 s macNem1.NW_012014355v1 611411 1 + 19675229 T i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543648 1 + 16847902 T i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474674 1 - 91754291 T i chlSab2.chr15 I 200 C 0 s manLeu1.NW_012102020v1 658506 1 - 1977891 T i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522434 1 + 7796314 T i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986087 1 - 74750902 C i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503830 1 + 17725628 C i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 36561 1 - 3732694 c i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65473815 1 - 98207768 T i mm10.chr16 C 0 C 0 e otoGar3.GL873829 477491 1 - 608964 I e dasNov3.JH569502 3949765 0 + 6579706 C e canFam3.chr33 29113921 473 + 31377067 I e cebCap1.NW_016107444v1 478981 215 - 6778120 I a score=48029.000000 s hg38.chr3_KI270779v1_alt 192058 16 + 205312 TAGGACACCTGTTGTG s panTro5.chr3 200179513 16 + 202621043 TAGGACACCTGTTGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136137 16 + 190779 TAGGACACCTGTTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26730 16 - 189199 TACGACACCTGTTGTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120944759 15 + 123690457 GAGG-CACCTGTTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519589 16 + 204787373 TAGGATGCCTGTTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125171 16 + 192460366 TAGGACGCCTGTTGTT i macFas5.chr2 I 154 C 0 s macNem1.NW_012014355v1 611412 16 + 19675229 TAGGATGCCTGTTGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543649 16 + 16847902 TAGGATGCCTGTTGTT i cerAty1.NW_012004056v1 C 0 I 200 s chlSab2.chr15 474675 16 - 91754291 TAGGACACCTGTTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658507 16 - 1977891 TAGGATGCCTGTTGTT i manLeu1.NW_012102020v1 C 0 I 272 s colAng1.NW_012118932v1 522435 16 + 7796314 TAGGATGCCTGTTGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986088 1 - 74750902 T--------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503831 1 + 17725628 C--------------- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 36562 12 - 3732694 taggACACCTGT---- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477492 5 - 608964 tgaga----------- i otoGar3.GL873829 I 1 C 0 s mm10.chr16 65473816 14 - 98207768 TAGGATACCAGCAG-- i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3949765 0 + 6579706 C e canFam3.chr33 29113921 473 + 31377067 I e cebCap1.NW_016107444v1 478981 215 - 6778120 I a score=32296.000000 s hg38.chr3_KI270779v1_alt 192074 6 + 205312 AGGACA s panTro5.chr3 200179529 6 + 202621043 AGGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136153 6 + 190779 AGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120944774 6 + 123690457 AGGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519605 6 + 204787373 AGGACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125187 6 + 192460366 AGGACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611428 6 + 19675229 AGGACG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543865 6 + 16847902 AGGACG i cerAty1.NW_012004056v1 I 200 C 0 s chlSab2.chr15 474691 6 - 91754291 AGGACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658795 6 - 1977891 AGGACG i manLeu1.NW_012102020v1 I 272 C 0 s colAng1.NW_012118932v1 522451 6 + 7796314 AGGACA i colAng1.NW_012118932v1 C 0 I 105 s mm10.chr16 65473830 6 - 98207768 AGGGCA i mm10.chr16 C 0 C 0 e otoGar3.GL873829 477497 0 - 608964 C e dasNov3.JH569502 3949765 0 + 6579706 C e canFam3.chr33 29113921 473 + 31377067 I e aotNan1.NW_018507959v1 36574 0 - 3732694 C e cebCap1.NW_016107444v1 478981 215 - 6778120 I e calJac3.chr17 986089 0 - 74750902 C e saiBol1.JH378146 503832 0 + 17725628 C e gorGor5.CYUI01000254v1 26746 0 - 189199 C a score=30498.000000 s hg38.chr3_KI270779v1_alt 192080 9 + 205312 CCTGTTGTT s panTro5.chr3 200179535 8 + 202621043 CTTGTTGT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136159 8 + 190779 CCTGTTGT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120944780 9 + 123690457 CCTGTTGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519611 9 + 204787373 CCTGTTATT i rheMac8.chr2 C 0 I 232 s macFas5.chr2 125193 9 + 192460366 CCTGTTGTT i macFas5.chr2 C 0 I 78 s macNem1.NW_012014355v1 611434 9 + 19675229 CCTGTTATT i macNem1.NW_012014355v1 C 0 I 232 s cerAty1.NW_012004056v1 543871 9 + 16847902 CCTGTTGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474697 9 - 91754291 CCTGTTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658801 9 - 1977891 CCTGTTGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522562 9 + 7796314 CCTGTTGTT i colAng1.NW_012118932v1 I 105 C 0 s otoGar3.GL873829 477497 7 - 608964 --tGTTTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473836 4 - 98207768 TCTG----- i mm10.chr16 C 0 C 0 e dasNov3.JH569502 3949765 0 + 6579706 C e canFam3.chr33 29113921 473 + 31377067 I e aotNan1.NW_018507959v1 36574 0 - 3732694 C e cebCap1.NW_016107444v1 478981 215 - 6778120 I e calJac3.chr17 986089 0 - 74750902 C e saiBol1.JH378146 503832 0 + 17725628 C e gorGor5.CYUI01000254v1 26746 0 - 189199 C a score=83657.000000 s hg38.chr3_KI270779v1_alt 192089 31 + 205312 ACGACACCTGTTGTGAGGACACCTGTTGTGG s panTro5.chr3 200179543 16 + 202621043 --------------GAGGACACCTGTTGTG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136167 16 + 190779 --------------GAGGACACCTGTTGTG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s nomLeu3.chr11 120944789 30 + 123690457 AGGACAGCTGCTGTGAGGACACCTGTTGTG- i nomLeu3.chr11 C 0 I 450 s rheMac8.chr2 202519852 30 + 204787373 AGGACGCCTGTTGTTAGGACACCTGTTGTT- i rheMac8.chr2 I 232 C 0 s macFas5.chr2 125280 30 + 192460366 AGGACGCCTGTTGTTAGGACGCCTGTTGTT- i macFas5.chr2 I 78 C 0 s macNem1.NW_012014355v1 611675 30 + 19675229 AGGACGCCTGTTGTTAGGACGCCTGTTGTT- i macNem1.NW_012014355v1 I 232 C 0 s cerAty1.NW_012004056v1 543880 30 + 16847902 AGGACGCCTGTTGTTAGGATGCCTGTTGTT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474706 30 - 91754291 AGGACGCCTGTTGTTAGGACGCCTGTTGTT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658810 30 - 1977891 AGGACGCCTGTTGTTAGGATGCCTGTTGTT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522571 30 + 7796314 AGGACGCCTGTTGTTAGGACACCTGTTGTT- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 477504 20 - 608964 --TAGACACACAGATGAGGCAG--------- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65473840 0 - 98207768 C e dasNov3.JH569502 3949765 0 + 6579706 C e canFam3.chr33 29113921 473 + 31377067 I e aotNan1.NW_018507959v1 36574 0 - 3732694 C e cebCap1.NW_016107444v1 478981 215 - 6778120 I e calJac3.chr17 986089 0 - 74750902 C e saiBol1.JH378146 503832 0 + 17725628 C e gorGor5.CYUI01000254v1 26746 0 - 189199 C a score=342771.000000 s hg38.chr3_KI270779v1_alt 192120 41 + 205312 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCGGG s panTro5.chr3 200179559 41 + 202621043 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136183 41 + 190779 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26746 41 - 189199 AGGACACCTGTGGAGGAATGTGGCTCCTCCTTC-------------CATCCGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945269 41 + 123690457 AGGACACCTGTGAAGAAATGTGGCTCCTCCTTC-------------CATCCAGC i nomLeu3.chr11 I 450 C 0 s rheMac8.chr2 202519882 41 + 204787373 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125310 41 + 192460366 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611705 41 + 19675229 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCAGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543910 41 + 16847902 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCAGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474736 41 - 91754291 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCTAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658840 41 - 1977891 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTC-------------CATCCAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522601 41 + 7796314 AGGACCCCTGTGGAGGAATGTGGCTCCTCCTTC-------------CATCCAGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986089 54 - 74750902 AGGACACCTGTGGAGGAATGTGGTTCCTCCTTCCGCCCCCGTCCCGCCCCCCGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503832 21 + 17725628 AGGACACCTGTGGAGGAACGT--------------------------------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479196 38 - 6778120 AGGACACCTGTGGAGGAATGTGGCTCCTTC----------------CGTCCCGG i cebCap1.NW_016107444v1 I 215 C 0 s aotNan1.NW_018507959v1 36574 30 - 3732694 -----------GGAGGAATGTGGCTCCTCCTTC-------------TGTCCCGG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477524 29 - 608964 ------------GGGGTGTCCGGCTCCTCATTT-------------GACCGAGA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473840 19 - 98207768 ---------------GCTTGTGGCTT--------------------CATCCTGG i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3949765 28 + 6579706 -------------aggcatttggcTCctcattt-------------caacctga i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29113921 473 + 31377067 I a score=1157308.000000 s hg38.chr3_KI270779v1_alt 192161 103 + 205312 CATCATCCCTGGAGGGAGACACAAACGAGGGCCAGC------------------------------------CA-GGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCGTCCCCTTTGAGTCT s panTro5.chr3 200179600 102 + 202621043 CATCATCCCTGGAGGGAGACACAAACGAGG-CCAGC------------------------------------CA-GGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCGTCCCCTTTGAGTCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136224 102 + 190779 CATCATCCCTGGAGGGAGACACAAACGAGG-CCAGC------------------------------------CA-GGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCGTCCCCTTTGAGTCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26787 102 - 189199 CATCATCCCCGGAGGGAGACACAAACGAGG-CCAGC------------------------------------CA-GGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCGTCCCCTTTGAGTCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945310 102 + 123690457 CATCATTCCTGGAGGGACACAAAAACGAGG-CAAGC------------------------------------CA-GGATGC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGTGTCCCCTTTGACTCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202519923 102 + 204787373 CATCATCCCTGGAGGGAGACACAAATGAGG-AAAGC------------------------------------CA-GCATAC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCATCCCCTTTGAGTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125351 102 + 192460366 CATCATCCCTGGAGGGAGACACAAATGAGG-AAAGC------------------------------------CA-GCATAC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCATCCCCTTTGAGTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611746 102 + 19675229 CATCATCCCTGGAGGGAGACACAAATGAGG-AAAGC------------------------------------CA-GCATAC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCATCCCCTTTGAGTTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 543951 102 + 16847902 CATCATCCCTGGAGGGAGACACAAATGAGG-AAAGC------------------------------------CA-GGATAC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGTATCCCCTTTGAGTTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474777 102 - 91754291 CATCATCCCTGGAGAGAGACACAAATGAGG-AAAGC------------------------------------CA-GGATAC-AGGAAGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------AGTCTTTCCTGCATCCCCTTTGAGTTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658881 102 - 1977891 CATCATCCCTGGAGGGAGACACAAATGAGG-AAAGC------------------------------------CA-GGATAC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGTATCCCCTTTGAGTTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522642 102 + 7796314 CATCATCCCTGGAGGGAGACACAGATGAGG-AAAGC------------------------------------CA-GGATAC-AGGAGGAGTCTGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCATCCCCTTTGAGTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986143 102 - 74750902 CATCGTCCCTGAAGGGAGACACCAACGAAG-CAAGC------------------------------------CA-GGGAAG-AGGAGGCGTCGGGAAGTGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCATCCCCTCTGAGTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503853 89 + 17725628 -------------GGGAGATGCAAATGAGG-CAAGC------------------------------------CA-GGGACG-AGGGGGCGTCGGGAAGGGAATTTCCAG-------GCCCA------------GGTCTTTCCTGCATCCCCTTTGAGTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479234 102 - 6778120 CGTCGTCCCTGAAGGGAGACACAAATGAGG-CAAGC------------------------------------CA-GGGAAG-AGGGGGCGTCGGGAAGTGAATTTCCGG-------GCCCA------------GGTCTTTCCTGCATCCCCTCTGAGTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36604 102 - 3732694 CATCGTCCCTGAAGGGAGACACAAACGAGG-CAAGC------------------------------------CA-GGGAAG-AGGAGGCGTCGGGAAGTGAATTTCCCG-------GCCCG------------GGTCTTTCCTGCATCCCCTCTGAGTTT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477553 114 - 608964 CATCATCCCC-CACATAGAAGCATGTGAGG-CAAGC------------------------------------CAGGGGGAG-AGGATGGGTCTGGATGTGAATTTCCAG-------GTCTATCTACCTACAGGGGTTTTCCCTATGTCCCATGTGAGTTC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473859 107 - 98207768 CATCATCACTGAAGAGAGA----AATGAAG-TCAGC------------------------------------AA-GCAGA--AGAAAGAGTCTGAAGCAGAGACCCAAGCTTGTCTGCCCA--------TAAAGGTCTCTCCTG-ACTCCATTTAGGCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29114394 115 + 31377067 CATCATCCCTAAAGTTAGAAACACATGACA-GCAGC------------------------------------CA-AGGGACAAGGAGCAGTCTGGAAAAGAATTTCCAG-------GCCCTTCTGTGTGCTGGGGTCTTTGCTGCATCCCCATAGGGTTT i canFam3.chr33 I 473 I 290 s dasNov3.JH569502 3949793 146 + 6579706 catcatccctgaaggtagatac-gatgagg-gaatcagtctcagagaggttaagtaacctgctcagagttaact-aggaag-aggaggagtctgga--ttcattcccag-------atccatctccattcaaaggactttcctgtgtccc-ttTGAATTT i dasNov3.JH569502 C 0 C 0 a score=326373.000000 s hg38.chr3_KI270779v1_alt 192264 33 + 205312 TATAGGATCCTGATTAGGAGCGTG---AGATCCTGG s panTro5.chr3 200179702 33 + 202621043 TACAGGATCCTGATTAGGAGCGTG---AGATCCTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136326 33 + 190779 TACAGGATCCTGATTAGGAGCGTG---AGATCCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26889 33 - 189199 TACAGGATCCTGATTAGAAGCGTG---AGATCCTGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945412 33 + 123690457 TACAGGATCCTGATCAGGAGCGTG---AGCTCCTGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520025 33 + 204787373 TACAGGATTCTGATTAGGAACGTG---AGATCCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125453 33 + 192460366 TACAGGATTCTGATTAGGAACGTG---AGATCCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611848 33 + 19675229 TACAGGATTCTGATTAGGAACGTG---AGATCCTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544053 33 + 16847902 TACAGGATTCTGATTAGGAACGTG---AGATCCTGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474879 33 - 91754291 TACAGGATTCTGATTAGGAACGTG---AGATCCTGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 658983 33 - 1977891 TACAGGATTCTGATTAGGAACATG---AGATCCTGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522744 33 + 7796314 TACAGGATTCTGATTAGGAATGTG---AGATCCTGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986245 35 - 74750902 T-CAGGATCCCGATTAGGAGCATGTCATGGTCCTGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503942 33 + 17725628 TACAGGATCCCGATTAGGAGCGTG---AGATCCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479336 33 - 6778120 TACAGGATCCCGATTAGGAGCGTG---AGATCCTGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36706 33 - 3732694 TACAGGATCCCGATTAGGAGCGTG---AGATCCTGG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477667 33 - 608964 TGCAACATTTCAACTAGGAAGCTA---AGACCTGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65473966 33 - 98207768 TTCAGTACTGGGACTAGGAACCAG---AAACCTTGT i mm10.chr16 C 0 C 0 s dasNov3.JH569502 3949939 11 + 6579706 TAAGGTATTTT------------------------- i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29114509 290 + 31377067 I a score=3298650.000000 s hg38.chr3_KI270779v1_alt 192297 288 + 205312 AGAACTGGGCGTGCG-CACTCCT-GTTCACCTCTTCCCTGCCCACGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAATATGCCCA-TTTTCCAGAGTTAGGAT-GTGTCTGGGTCTCTGTGA-TAAATGGCTCTGTCTTCATCTGGGTT-------GGGTCACGGGACACCCATTTGTCCTTCCTTCTCTCCTCCCAAGGCATCCGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAACCTCCTAGGCCCGC--------ATACTGCT s panTro5.chr3 200179735 288 + 202621043 AGAACTGGGCGTGCG-CACTCCT-GTTCACCTCTTCCCTGCCCCCGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAATATGCCCA-TTTTCCAGAGTTAGGAT-GCATCTGGGTCTCTGTGA-TAAATGGCTCTGTCTTCATCTGGGTT-------GGGTCACGGGACACCCATTTGTCCTTCCTTCTCTCCTCCCAAGGCATCCGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAACCTCCTAGGCCCGC--------ATACTGCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136359 288 + 190779 AGAACTGGGCGTGCG-CACTCCT-GTTCACCTTTTCCCTGCCCCCACCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAATATGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTGGGTCTCTGTGA-TAAATGGCTCTGTCTTCATCTGGGTT-------GGGTCACGGGACACCCATTTGCCCTTCCTTCTCTCCTCCCAAGGCATCCGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTCGTGGCCG----AAAAACCTCCTAGGCCCGC--------ATACTGCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 26922 288 - 189199 AGAACTGGGCGTGCG-CACTCCT-GTTCACCTCTTCCCTGCCCACGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAATACGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTGGGTCTCTGTGA-TAAATGGCTCTGTCTTCATCTGGGTT-------GGGTCACGGGACACCCATTTGTCCTTCCTTCTCTCCTCCCAAGGCATCCGATGGGGACAGAAT-GGGGTGAATGAAAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAACCTCCTAGGCCCGC--------ATACTGCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945445 287 + 123690457 AGAACTGGGCGTGCG-CGCTCCT-GTTCGCCTCTTCCCTGCCTATGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACATGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTGGGTCTCTGTGA-TAAATGGCTCTGTCTTCATCTGGGTT-------GGGTCACGGGACACCCATTTGTCCTTCCTTCTCCCCTCCCAAGGCCTCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAACCTCCTAGG-CCAC--------GTACTGCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520058 288 + 204787373 AGAACTGGGCATGCG-CACTCCT-GTTCACCTCTTCCCTACCCACGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACGTGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGA-TAAATGACTGTCTCTTCATCTGGGTT-------GGATCATGGGACACCCATTTGTCCTTCCTTCCCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAATCTCCTAGGCCTGC--------ATGCTGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125486 288 + 192460366 AGAACTGGGCATGCG-CACTCCT-GTTCACCTCTTCCCTACCCACGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACGTGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGA-TAAATGACTGTCTCTTCATCTGGGTT-------GGATCATGGGACACCCATTTGTCCTTCCTTCCCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAATCTCCTAGGCCTGC--------ATGCTGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 611881 288 + 19675229 AGAACTGGGCATGCG-CACTCCT-GTTCACCTCTTCCCTACCCACGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACGTGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGA-TAAATAACTGTCTCTTCATCTGGGTT-------GGATCATGGGACACCCATTTGTCCTTCCTTCCCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAATCTCCTAGGCCTGC--------ATGCTGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544086 288 + 16847902 AGAACTGGGCATGTG-CACTCCT-GTTCACCTCTTCCCTGCCCACGCCCATTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACGTGCCCA-TTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGA-TAAATGACTGTCTCTTCATCTGGGTT-------GGATCATGGGACACCCATTTGTCCTTCCTTCTCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAATCTCCTAGGTCTGC--------ATGCTGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 474912 281 - 91754291 AGAACTGGGCATGCG-CACTCCT-GTTCACCTCTTCCCTACCCATGCCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACGTGCCCA-TTTTCCA-------GAT-ACGTCTAGGTCTCTGTGA-TAAATGACTGTCTCTTCATCTGGGTT-------GGATCATGGGACACCCATTTGTCCTTCCTTCTCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGGAAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTTCTTGTGGCCG----AAAAGTCTCCTAGGCCTGC--------ATGCTGCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659016 288 - 1977891 AGAACTGGGCATGTG-CACTCCT-GTTCACCTCTTCCCTGCCCACGCCCATTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCAACGTGCCCA-TTTTCCAGAGTTAGGAT-GCATCTAGGTCTCTGTGA-TAAATGACTGTCTCTTCATCTGGGTT-------GGATCATGGGACACCCATTTGTCCTTCCTTCTCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCG----AAAAATCTCCTAGGTCTGC--------ATGCTGCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 522777 288 + 7796314 AGAACCGGGCATGCG-CACTCCT-GTTCACCTCTTCCCTGCCCACACCCGTTTCCCTTCTGCTTT-----------CCAGTTCCC-CTCAACGTGCCCA-TTTTCCAGGGTTAGGAT-GCGTCTAGGTCTCTGTGA-TAAATGACTCTCTCTTCATCTGGGTT-------GGATCATGGGACACCCGTTTGTCCTTCCTTCTCCCCTCCCAAGGCATCTGATGGGGACAGAAT-GGGGTGAATGAGAGGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCTG----AAAAACCTCCTAGGCCTGC--------ATGCTGCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986280 286 - 74750902 AGATCTGGGCGTGTG-CACTCCT-GTTCACCTCTTCCCTGCCCACACCCGTTTCCCTTCTGCTTT-----------CCAGCTCCC-CTCACCTTGCCCA-TTTTCCAGAGTGAGGAT-GCGTCTCGGTCTCTTTGA-TAAATGATTCCTCCTTCCTCTGGGTT-------GGCTCACAGGACACCCATTTGTCCTTCCTTCTCCCTTCCCAAGGCATCTGATGGGGACAGAGT-GGGGTGAATGG--GGGGA-CAAAATGAATGGCTTCTCT----AGTTCCATGTGGCTG----AAAAACCTCCCAGGCCCAC--------ATACTGCT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 503975 278 + 17725628 CGATTTGGGCGTGTG-TACTCCT-GTTCACCTCTTCCCCGCCCACG--------TCTTCTGCCTT-----------CCAGCTCCC-CTCCCTTGGCCCA-TTTTCCAGAGTGAGGTT-GCGTCTCGGTCTCTGTGA-TAAATGATT-CTCCCTCCTCTGGGTT-------GGCTCACAGGACACCCATTTGTCCTTCCTTCTCCCTTCCCAAGGCATCTGATGGGGACAGAGT-GGGGTGAATGG--GGGGAGCAACATGAGTGGCTTCTCT----AGTTCCACGTGGCTG----GAAAACCTCCCAGGCCCAC--------ATACTGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479369 287 - 6778120 AGATTTGGGCGTGCA-CCCTCCT-GTTCACCTCTTCCCTGCCCATGCCCGTTTCCCTTCTGCCTT-----------CCAGCTCCC-CTCCCCTTGCCCA-TTTTCCAGGGTGAGGAT-GCGTCTCCGTCTCTGTGA-TAAATGATTCCTCCTTCCTCTGGGTT-------GGCTCACAGGACACACATTTGTCCTTCCTTCTCCCTTCCCAAGGCATCTGGTGGGGATAGAGTGGGGGTGAATGG--GGGGA-CAAAATGAGTGGCTTCTCT----AGTTCCATGCGGCTG----AAAAACCTCCCAGGCGCAC--------ATACTGCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 36739 286 - 3732694 AGATCTGGGCGTGCG-CAATCCC-GTTCACCTCTTCCCTGCCCACACCCGTTTCCCTTCTGCCTT-----------CCAGCTCCC-CTCACCTTGCCCA-TTTTCCAGAGTGAGGAT-GCGTCTCGGTCTCTGTGA-TAAATGATTCCTCCTTCCTTTGGGTT-------GGATCACAGGACACACATTGGTCCTTCCTTCTCCCTTCCCAAGGCATCTGATGGGGATAGAGC-GGGGAGAACGG--GGGAA-CAAAACGAGCGGCTTCTCT----AGTCCCATGTGGCTG----AAAAACCTCCCAGGCCCGT--------GTACTGCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 477700 301 - 608964 GTAACAAACCTTGTG-CAATTTT-ATTCATCTTCTCCCTGCCCACCCGTGGCTCTCTTCTGTTTT-CCTTTTGAGCCCAGCTCCT-CTCAGCTTGCCAGTTTTTCCAGAGTTAGGAT-GCTTTTAGGTCTCTGAGATTAAAGGCCTCTCCCTTTATCTGGGGTGGGGGAGGGATTGCGAGATTCCCATTT---CTCCCTCCTCCCCTCCCAAGGCATCTGGTGGGGACAGA---GGGGTGCGTAAGAGGGGA-GGAAATGAGTGGGTCCACT---GAGTTCTGCCTGGTGG------AGACCTCCTAGGCCTGC--------AAACCACT i otoGar3.GL873829 C 0 I 137 s mm10.chr16 65473999 261 - 98207768 GAGAAGAGCTCTGTGATATTCCC---CCATCTTCTCCCTGTCT-CTCTCAGGTCTCTTTGACTTT-CCCTTTGAGGCCAGCTCCA---TGGCTTGTTCA-TTTTCCAGTGTT--------------GTGTCTGTAG-T-AATGCCTCTCTCTCTGCCCAGGT--------GAATCTTGAGGATTTTGTT---CTTTCCTTCTGCCCTCCCAATGCATCCTACAGG-------T-CGGTTA-------GGGGA-AGAAACCACTGGCTTCTCCTAGATGTGCCCTGT---------CAAGACCTCCCATGGCTCT--------AGGCTGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29114799 280 + 31377067 AGACATCGGTGTGTG-CACACCTCATTCATCTTTTCTCTGCCTGCCTCCACTTCCCCTCTCGGTTGCCCTTTCTGCCTGGCTCCTTCTCAACTGGCTCC-TTTTCCAGAGCTGGGATGGCTCCTGTGTCTCTGCAA-CAAATGCCTCTGTCTTTGTCTG----------------------------TTTGTCCTTCCTTCTCCCCTCCCAAGGCATCCGATGGGGACACAGA-GGGGAGAGTAAGAGAGGA-GGCCATGAGTGGATTCTCT---CCGTCCTGTTTGGTGG------AGACCTCCTAGGCCTGC--------AGACCATG i canFam3.chr33 I 290 C 0 s dasNov3.JH569502 3949950 302 + 6579706 -----TGGACCTGCT-CAATGCTAATTCATCCTCTCCCTGCCTACCTCCGGTTCCCTTCTCTTTCTCCCTTTGAGCCCAGCTCCTTCTCAACTTGCCAA-TTTTCAAGGGTTGGGAT-GCTTCCAGTTGTCTATGA-TAAATGCCTCTCCTTTTATCTGGGGT-------GGATGGTGAAATAGCCAT----CCTTCCTTCTCCCCTCCCAAGGCTTCTGATGTGGACAGAGA-AGGGGGA--GAAAGGGGA-GGAAATGAGTACATTCTGA----GTTTTGCCAGAGCCTGGGTGGAGACCTCCTAGGTTTTCCTTGGGGGAAACTGCT i dasNov3.JH569502 C 0 C 0 a score=279473.000000 s hg38.chr3_KI270779v1_alt 192585 28 + 205312 GGGT-----------------CTGCATAGGG---G-CAGGAGTCTGAAG s panTro5.chr3 200180023 28 + 202621043 GGGT-----------------TTGCATAGGG---G-CAGGAGTCTGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136647 28 + 190779 GGGT-----------------TTGCACAGGG---G-CAGGAGTCTGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27210 28 - 189199 GGGT-----------------TTGCATAGGG---G-CAGGAGTCTGAAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945732 28 + 123690457 GGGT-----------------GTGCATAGGG---G-CAGGAGTGTGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520346 28 + 204787373 GGGT-----------------TTGCACAGGG---G-CAGGAGTCTGAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125774 28 + 192460366 GGGT-----------------TTGCACAGGG---G-CAGGAGTCTGAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612169 28 + 19675229 GGGT-----------------TTGCACAGGG---G-CAGGAGTCTGAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544374 27 + 16847902 GGGT-----------------GTGCACA-GG---G-CAGGAGTCTGAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475193 27 - 91754291 GGGT-----------------GTGCACA-GG---G-CAGGAGTCTGAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659304 28 - 1977891 GGGT-----------------GTGCACAGGG---G-CAGAAGTCTGAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523065 28 + 7796314 GGGT-----------------TTGCACAGGG---G-CAGGAGTCTGAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986566 27 - 74750902 GGCT-----------------TTGCC-GGGG---G-CATAAATCTGAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504253 28 + 17725628 GGCT-----------------CTGCCTGGGG---G-CATGAATCTGAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479656 28 - 6778120 GGCT-----------------TTGCCCAGGG---G-CATGAATCTGAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 37025 28 - 3732694 GGCT-----------------TTGCCTAGGG---G-CATGGATCTGAAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478138 45 - 608964 gggtctcagtcccctatctgcttgcaCAGGG---G-CAAGAATCTGAAG i otoGar3.GL873829 I 137 C 0 s mm10.chr16 65474260 31 - 98207768 GAGT-----------------TTGCTTCAGGCATG-AAGAACTCTGTAG i mm10.chr16 C 0 I 1552 s canFam3.chr33 29115079 27 + 31377067 GTGC-----------------TTACTCA-CA---G-CAGGAACCTGAAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3950252 29 + 6579706 GGGT-----------------TTTCACTGGG---GACAGGAATCTGATT i dasNov3.JH569502 C 0 C 0 a score=83518.000000 s hg38.chr3_KI270779v1_alt 192613 7 + 205312 TCAGGTG s panTro5.chr3 200180051 7 + 202621043 TCAGGTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136675 7 + 190779 TCAGGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27238 7 - 189199 TCAGGTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945760 7 + 123690457 TCAGGTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520374 7 + 204787373 TCAGGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125802 7 + 192460366 TCAGGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612197 7 + 19675229 TCAGGTG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544401 7 + 16847902 TCAGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475220 7 - 91754291 TCAGGTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659332 7 - 1977891 TCAGGTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523093 7 + 7796314 TCAGGTG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986593 7 - 74750902 TGAGGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504281 7 + 17725628 TCAGGCG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479684 7 - 6778120 TCAGGTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 37053 7 - 3732694 TCAGGTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478183 7 - 608964 TCAGGTG i otoGar3.GL873829 C 0 I 183 s canFam3.chr33 29115106 7 + 31377067 CCAACTT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3950281 7 + 6579706 CCACGTT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I a score=3280874.000000 s hg38.chr3_KI270779v1_alt 192620 296 + 205312 TAAGTTAATATTCCACGGGAGGCA--GGAAGAGCTTAGTGTGGATGTGGGGTGTAAGTAAATTGGAGCAAGGATAAGATCATGAGATTCTCC--------------CAGACTTGGCTTGAAGAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTCCAAGAGAGATTCCCCTTCTAAGCTACCC-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTACCTTTATATCATTTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGATCTCGAGCAGGAAG s panTro5.chr3 200180058 296 + 202621043 TAAGTTAATATTCCACGGCAGGCA--GGAAGAGCTTAGTGTGGATGTGGGGTGTAAGTAAATTGGAGCAAGGATAAGATCATGAGATTCTCC--------------CAGACTTGGCTTGAAGAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTTCAAGAGAGATTCCCCTTCTAAGCTACCC-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTACCTTTATACCATTTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGAGCTCGAGCAGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136682 296 + 190779 TAAGTTAATATTCCACGGCAGGCA--GGAAGAGCTTAGTGTGGATGTGGGGTGTAAGTAAATTGGAGCAAGGATAAGATCATGAGATTCTCC--------------CAGACTTGGCTTGAAGAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTTCAAGAGAGATTCCCCTTCTAAGCTACCC-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTACCTTTATATCATTTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCGATCTTGTCAGACTTAGGACAACTAGGCTGAGCTCGAGCAGGAAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27245 295 - 189199 TAAGTTAATATTCCACGG-AGGCA--GGAAGAGCTTAGTGTGGATATGGGGTGTAAGTAAATTGGAGCAAGGATAAGATCATGAGATTCTCC--------------CAGACTTGGCTTGAAGAGAG---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTCCAAGAGAGATTCCCCTTCTAAGCTACCC-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTACCTTTATATCATTTATG-----------CC-----------TCGTGCTGTGAATATAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGAGCTCGAGCAGGAAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120945767 296 + 123690457 TAAGTTAATGTTCCATGGGAGGCA--GGAAGAGCTTAGTGTGGATGTGGGGTGTGAGTAAATTGGAGCAAGGATAAGATCGTGAGATTTTCC--------------CAGACGTGGCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTCCAAGGGAGATTCCCCTTCTAAGCTACCC-A-AGTAGGAGTCCATA-----GTTTTT-------TGCATCCCCTAAAATTGCTTACCTTTATATCATTTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGAGCTCGAGCAGGAAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520381 296 + 204787373 TAAGTTAATATTCCCTGGGGGGCA--GGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGATAAGATCATGAGATTCTCC--------------CAGACCGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTGCCTTTATATCATGTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 125809 296 + 192460366 TAAGTTAATATTCCCTGGGGGGCA--GGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGATAAGATCATGAGATTCTCC--------------CAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTGCCTTTATATCATGTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612204 296 + 19675229 TAAGTTAATATTCCCTGGGGGGCA--GGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCAAGGATAAGATCATGAGATTCTCC--------------CAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTGCCTTTATGTCATGTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544408 296 + 16847902 TAAGTTAATATTCCCTGGGGGGCA--GGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGATAAGATCATGAGATTCTCC--------------CAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTGCCTTTATATCATGTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475227 296 - 91754291 TAAGTTAATGTTCCCTGGGGGGCA--GGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGATAAGATCATGAGATTCTCC--------------CAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCTCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTGCCTTTATATCATTTATG-----------CC-----------TTGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659339 296 - 1977891 TAAGTTAATATTCCCTGGGGGGCA--GGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGATAAGATCATGAGATTCTCC--------------CAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGTTTGCCTTTATATCATGTATG-----------CC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523100 296 + 7796314 TAAGTTAATGTTCCCTGGGGGGCA--GGAAGAGCTGAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGATAAGATCATGAGATTCTCC--------------CAGACTTGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCCAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCT-A-AGTAGGAGTCCCTA-----GTTTTT-------TGGGTCCCCTAAAATTGCTTGCCTTTATATCATTTACG-----------CC-----------TCGTGCTGTGAATAAACTTCAGTCTTGCCAAACTTAGGACAACCAGGCTGAGCTCGAGCAGGAAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986600 295 - 74750902 TAAGTT-ATATTCCATGGGAGGCA--GAAAGAGCTTGGTGTGGATGTGGGGTGTGAGTGAACTGGAGCAAGGATAAGATCATGAGCTCTTCG--------------AGGACTGGGCTTGAATAGAC---CACTGGATTTGGGGCAGCAAAGTCAGGATCTCCAAGAGAGGTTCCCTTTCTAAGCTACCC-A-AGTAGGAGTCCCTA-----GCTTTT-------TGGGTCCCCTAAAATTGGTTACCTCCATATCATTTATG-----------CC-----------TCGTGCTGTGAATAAAGCTAACTCTGGTCAGACTTAGAACAACTAGGCTGAGAGAGGGCAGGAAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504288 295 + 17725628 TGAGTT-ATATTCCGTGGGAGGCA--GAAGCAGCTCTGTGTGGAGGTGCGGTGTGAGCAGACTGGAGCGGGGACAGGATCACGAGTTTTTCC--------------CATGCTGGGCTGGAACAGAC---CCCTGGGGCTGGCGCAGCAAAGCCAGGATCTCCAAGGGAGGTTCCCTTTCTAAGCTACCC-A-AGCGGGAGACCCTA-----GCTTTC-------CGGGTCCCCTAAAATTGCTTACCTCCGTATCATTTTTG-----------CC-----------TTGTGCTGTGAATAAAGTTCAATCTGGTCCGACGTAGAACAACTAGGCTGAGATGGGGCAGGAAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479691 293 - 6778120 TAAGTT-ATATTCCACGGGCGGCA--GAAGCGGCTCAGCGTGGAGGTGCGGTGTGAGTGGGCTGGAGCAGGGATAGGACCACGAGCTTTTCC--------------CAGGCTGGGCTTGAATAGAC---CGCTGGAGCTGGGGCAGCAAAGCCAGGATCTCCAAGGGAGGTTCCCTTTCTAAGCTACCC-A-AGCAGGAGTCCCTA-----GCTTTT-------TGGGTCCCCTAAAATTGCTCACCTCCATATCATTTATG-----------CC-----------TCGTGC--TGAATAAAGTTAAATCTGGTCAGACGTAGAACAGCTAGGCTGAGATGCGGCAGGAAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 37060 288 - 3732694 TAAGTT-ATGTTCCATGGGAGGCA--GAAAGAGCTCAGTGTGGA-------TGTGAGTAAACCGGCGCAGGGATAAGATCACGAGCTTTTTC--------------CAGACTGGGCTTGAATAGAC---CACTGGACCTGGGGCAGCAAAGTCAGGATCTCCAAGAGAGGTTCCCTTTCTAAGCTACCC-A-AGTGGGAGTCCCTA-----ATGTTT-------TGGGTCCCCTAAAATTGCTTACCTCCACATCATTTATG-----------CC-----------TCGTGCTGTGAATAAAGTTAAATCTGGTCAGACTTCGAACAACTAGGCTGAGATAGGGCGGGAAA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478373 319 - 608964 TAAATTGATATTCTGTGG-GGGCA--ACAAGAGTTCAGTCTGGGCTTGAGGTATAAGTAAATTAGAACAAGGATAGGATTCTGAATTTTTCTCATGGGAGCAA-GACAGACTTGCCTTGAGCAGAC---AGCTGGGTTC-AGGTAGTGCAGTCAAGATCATCAAGGACAATTTCTCTTCTAAGCTATCCAA-AACAGGAGTCCTAG-----TTTTGG-------GGGGTTCCCTAAAATTGCTTACCTCCTTTTCATGTATGCCTTCATAGAACC-----------TCATTCTGCTAATAAAGTTAATTCTGGTCAGAATTAAAACATTCAGACTGAGATAGGGCAGGAAG i otoGar3.GL873829 I 183 C 0 s canFam3.chr33 29115113 320 + 31377067 TACACTGATGCTTCATGG-GGACATCTAGAAAGCTCCGTCTGGATTTGCGGTATAAGTAAATTGGACCAAGGATAAGATTATGACCTTCT----------------CAGAGTTGGCT-GAACAGACTCAGCCTGGGTTCAGGGCACTGGAGTCAAGATCCCAAAAGGAGATTTCTCTTCTAAGCTAACC-AGAGTGGGAGGGCCTAGGAGGGTTTTTGGGGGGAGGGGGTTGCCAAAATTGCTGACATCCTTATAATATATG-----------CCCTGATAGACAGTCAGGCTGCTAATTACGTTCCTTCTCACCAGACCTACAGTACCTAGA-TGAGATGGGGCAGGAgg i canFam3.chr33 C 0 I 192 s dasNov3.JH569502 3950288 317 + 6579706 TAAGTTGATAT--CACAGTGGGCA--AAGAGAGCTTAGCCTGGACTTGGGGTAT----AAATTGGAACAAGGACAAGAGTATGAACTTCTCACGTGGAAGGAAGGGCAGACTTGGCTTTAACAGACTCAGCCTGGGTCCTGGGCAGCAGAGTCAGGATCTTACAGGGAGATTTCTGTCCAAGACACCCA-A-AGCATGAGGCCCTA-----CTTTTG-------GGGGTCCTCT-AAATAGCTTACCTCCATATAACTTATGGCCTTATAGAACC-----------CCATGCTTCTAATAAAGTTACTTCTGGTCAGATTTAAGCCTCTTAGACTGAGATGGGGCAGGTAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I a score=580802.000000 s hg38.chr3_KI270779v1_alt 192916 78 + 205312 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTCCCTAGTCAGTGACCCAGC s panTro5.chr3 200180354 78 + 202621043 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTTCCTAGTCAGTGACCCAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 136978 78 + 190779 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTTCCTAGTCAGTGACCCAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27540 78 - 189199 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTCCCTAGTCAGTGACCCAGC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946063 78 + 123690457 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAGGGTGTGCGGATTCTCTAGTCAGCGACCCAGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520677 75 + 204787373 CTGGATAT---TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126105 75 + 192460366 CTGGATAT---TTAAGTCTGATGTGCCTCCTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612500 75 + 19675229 CTGGATAT---TTAAGTCTGATGTGCCTCCTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544704 75 + 16847902 CTGGATGT---TTATGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCATGTGGATTCTCTAGTCCGTGACCCAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475523 75 - 91754291 CTGGATGT---TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659635 75 - 1977891 CTGGATGT---TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523396 69 + 7796314 CTGGATG----TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCAGTGAC----- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986895 77 - 74750902 CTGGATGCTTATGAAGTCTGATTTACCTACTAAGTCTGGGCTGAAAAGG-CTGTGGGTTCTCTAGTCGGTGACCCAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504583 60 + 17725628 CTGGATGCT------------------TACAAAGTCTGGACTGAAAAGGCCTGTGGGTTCTCTAGTCGGTGACCCAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 479984 78 - 6778120 CTGGATGCTTACGAAGTCCGATTTACCTACGAACTCCGGGCTGAAAAGGCTTGTGGGTTCTCTAGTCGGTGACCCAGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 37348 76 - 3732694 CTGGATGCTTATGAAGTCTGATTTACCTACTAAGTCCGGACCAAAAAGGCTTGTGGGTTCTCTAGTCAGTGACCCA-- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478692 47 - 608964 TCAGAAGTTTATTTGGT------TATTTATTAAGTTTTGAACAAAAA-----------------------GACTCA-- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3950605 26 + 6579706 TCAGGCAT---TTAAGTCT-------CTAGTTAAGC------------------------------------------ i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29115433 192 + 31377067 I a score=617140.000000 s hg38.chr3_KI270779v1_alt 192994 74 + 205312 ATGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGCCCTGTGAAGTACAAAGCGCTG-CCCTAC- s panTro5.chr3 200180432 74 + 202621043 ATGAAGCCGATCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGCCCCGTGAAGTACAAAGCGCTG-CCCTAC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137056 74 + 190779 ATGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGCCCCGTGAAGTACAAAGCGCTG-CCCTAC- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27618 74 - 189199 ATGAAGCCAGTCA-CTAGAGTGCCAAGCCCTGAGCCTGTC------------------CCCATGGCCCCGTGAAGTACAAAGCGCTG-CCCTAC- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946141 73 + 123690457 ATGAAACCGGTCA-CTAGAGTGCCAGG-CCTGAGCCTGTC------------------CCCACGGCCCCGTGAAGTACAAAGCGCTG-CCGCAC- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520752 74 + 204787373 GTGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGTCCCATGAAGTGCAACGCGCTG-CCCCAC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126180 74 + 192460366 GTGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGTCCCATGAAGTGCAACGCGCTG-CCCCAC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612575 74 + 19675229 GTGAAGCCAGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGTCCCATGAAGTGCAACGCGCTG-CCCCAC- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544779 74 + 16847902 GTGAAGCCGGTCA-ATAGAGTGCCAGGCCCTCAGCCTGTC------------------CCCATGGTCCCATGAAGTGCAACGCGCTG-CCCCAC- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475598 74 - 91754291 GTGAAGCCGGTCA-GTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGTCCCATGAAGTGCAACGCGCTG-CCCCAC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659710 74 - 1977891 GTGAAGCTGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTC------------------CCCATGGTCCCATGAAGTACAACGCGCTG-CCCCAC- i manLeu1.NW_012102020v1 C 0 I 11 s colAng1.NW_012118932v1 523465 53 + 7796314 ----------------------CCAGGCCCTGAGCCTGTC------------------CCCATGGTCCCATGAAGTGCAACGCGCTG-CCCCAC- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 986972 71 - 74750902 AAGAAGTTGGTCA-CTGGAGTGCCAGGCCCTGTGCATGTG------------------CC--AGACCCCGTGAAGTCCAAAGCACTG-CCC-AC- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504643 54 + 17725628 ATGAAGTAGGTCA-CTGGAGTGCCAG-------------------------------------GACCCCATGAAGTCCGAAGAACTG-CCC-AC- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480062 71 - 6778120 ATGAAGTTGGTCA-CTGGCGTGCCAGGCCCTGTGCATGTG------------------CC--GGACCCCATGAAGTCCAAAGCACTG-CCC-AC- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 37424 71 - 3732694 CTGAAGTCGGTCA-CTGGAGTGCCAGGCCCTGCGCATGTG------------------CC--GGACCCCATGTAGTGCAAAGCACCG-CCC-AC- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478739 64 - 608964 ----------CTA-CTAGGGTGGCAGG-CCTGTGCACAtc------------------cccacaaccctgtgaggtgcatgtcactatctccat- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29115625 75 + 31377067 GTTAAGTCAGACATCGGGAGTGCCAGGTCCTGCGTGTGTC------------------CCCATAACCCTGTGAGGTGCATGTGTCTC-CCCCAC- i canFam3.chr33 I 192 I 6 s dasNov3.JH569502 3950631 80 + 6579706 --------------CTAGAgtgccaggtgctgtgcatgcctcatctcacttaattctgcccataatcctgtgaggtgcatatcactc-cccccat i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I a score=290418.000000 s hg38.chr3_KI270779v1_alt 193068 31 + 205312 CTCTCAAGTGAGCACGCTGAGGCTCCAGGAG s panTro5.chr3 200180506 31 + 202621043 CTCTCACGTGAGCACGCTGAGGCTGCAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137130 31 + 190779 CTCTCACGTGAGCACGCTGAGGCTGCAGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27692 31 - 189199 CTCTCGCGTGAGCACGCTGAGGCTCCAGGAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946214 31 + 123690457 CTCTCACGTGAGCACGCTGAGGTTCCAGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520826 31 + 204787373 CTCTCGTGTGAGCACGCTGAGGCTCCAGGAG i rheMac8.chr2 C 0 I 15 s macFas5.chr2 126254 31 + 192460366 CTCTCGTGTGAGCATGCTGAGGCTCCAGGAG i macFas5.chr2 C 0 I 13 s macNem1.NW_012014355v1 612649 31 + 19675229 CTCTCGTGTGAGCACGCTGAGGCTCCAGGAG i macNem1.NW_012014355v1 C 0 I 15 s cerAty1.NW_012004056v1 544853 24 + 16847902 CTCTCAGA-------GCTGAGGCTCCAGGAG i cerAty1.NW_012004056v1 C 0 I 15 s chlSab2.chr15 475672 31 - 91754291 CTCTCGTGTGAGCACGCTGAGGCTCCAGGAG i chlSab2.chr15 C 0 I 15 s colAng1.NW_012118932v1 523518 31 + 7796314 CTCTCGTGTGAGCCCGCTGAGGCGCCAGGAG i colAng1.NW_012118932v1 C 0 I 13 s calJac3.chr17 987043 31 - 74750902 CTCACCTGTGAGCACGCTGAGGTTCCAGGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504697 30 + 17725628 CTCACACGTGAGCAC-CTGAGGTTCCAGGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480133 31 - 6778120 CTCACATGTGAGCACGCTGAGGTTCCAGGAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 37495 31 - 3732694 CTCACATGTGAGCACGCTGAGGTTCCAGGAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478803 31 - 608964 ctcactcgtgagaatactgaggtttcagaag i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29115706 31 + 31377067 CTCACGCGGGAGAGCATCCGGGTTCAGGGAG i canFam3.chr33 I 6 I 12 s dasNov3.JH569502 3950711 31 + 6579706 ctcatacataaggaaactgaggttcaggaag i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e manLeu1.NW_012102020v1 659784 11 - 1977891 I a score=-21695.000000 s hg38.chr3_KI270779v1_alt 193099 2 + 205312 C------------T s panTro5.chr3 200180537 2 + 202621043 C------------C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137161 2 + 190779 C------------C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27723 2 - 189199 C------------C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946245 14 + 123690457 ACGGGCACGTGCGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 126298 1 + 192460366 -------------C i macFas5.chr2 I 13 C 0 s colAng1.NW_012118932v1 523562 1 + 7796314 -------------C i colAng1.NW_012118932v1 I 13 C 0 s calJac3.chr17 987074 2 - 74750902 ------------AT i calJac3.chr17 C 0 I 12 s saiBol1.JH378146 504727 2 + 17725628 ------------AT i saiBol1.JH378146 C 0 I 12 s cebCap1.NW_016107444v1 480164 2 - 6778120 ------------AT i cebCap1.NW_016107444v1 C 0 I 18 s aotNan1.NW_018507959v1 37526 2 - 3732694 ------------AT i aotNan1.NW_018507959v1 C 0 I 12 s otoGar3.GL873829 478834 2 - 608964 ------------at i otoGar3.GL873829 C 0 I 12 s canFam3.chr33 29115749 1 + 31377067 -------------C i canFam3.chr33 I 12 I 1 s dasNov3.JH569502 3950742 2 + 6579706 ------------at i dasNov3.JH569502 C 0 I 12 e mm10.chr16 65474291 1552 - 98207768 I e macNem1.NW_012014355v1 612680 15 + 19675229 I e manLeu1.NW_012102020v1 659784 11 - 1977891 I e chlSab2.chr15 475703 15 - 91754291 I e cerAty1.NW_012004056v1 544877 15 + 16847902 I e rheMac8.chr2 202520857 15 + 204787373 I a score=3030.000000 s hg38.chr3_KI270779v1_alt 193101 1 + 205312 T s panTro5.chr3 200180539 1 + 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137163 1 + 190779 T i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27725 1 - 189199 T i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946259 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 126299 1 + 192460366 C i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 523563 1 + 7796314 C i colAng1.NW_012118932v1 C 0 I 1 s calJac3.chr17 987088 1 - 74750902 C i calJac3.chr17 I 12 C 0 s saiBol1.JH378146 504741 1 + 17725628 C i saiBol1.JH378146 I 12 C 0 s aotNan1.NW_018507959v1 37540 1 - 3732694 C i aotNan1.NW_018507959v1 I 12 C 0 s otoGar3.GL873829 478848 1 - 608964 c i otoGar3.GL873829 I 12 C 0 s canFam3.chr33 29115751 1 + 31377067 C i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3950756 1 + 6579706 C i dasNov3.JH569502 I 12 C 0 e mm10.chr16 65474291 1552 - 98207768 I e cebCap1.NW_016107444v1 480166 18 - 6778120 I e macNem1.NW_012014355v1 612680 15 + 19675229 I e manLeu1.NW_012102020v1 659784 11 - 1977891 I e chlSab2.chr15 475703 15 - 91754291 I e cerAty1.NW_012004056v1 544877 15 + 16847902 I e rheMac8.chr2 202520857 15 + 204787373 I a score=42933.000000 s hg38.chr3_KI270779v1_alt 193102 6 + 205312 CATCAT s panTro5.chr3 200180540 6 + 202621043 CATCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137164 6 + 190779 CATCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27726 6 - 189199 CATCAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946260 6 + 123690457 CATCTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520872 6 + 204787373 CATTAT i rheMac8.chr2 I 15 C 0 s macFas5.chr2 126300 6 + 192460366 CATTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612695 6 + 19675229 CATTAT i macNem1.NW_012014355v1 I 15 C 0 s cerAty1.NW_012004056v1 544892 6 + 16847902 CATCAT i cerAty1.NW_012004056v1 I 15 C 0 s chlSab2.chr15 475718 6 - 91754291 CATCAT i chlSab2.chr15 I 15 C 0 s manLeu1.NW_012102020v1 659795 6 - 1977891 CATCAT i manLeu1.NW_012102020v1 I 11 C 0 s colAng1.NW_012118932v1 523565 5 + 7796314 -ATCAT i colAng1.NW_012118932v1 I 1 C 0 s calJac3.chr17 987089 6 - 74750902 CGTGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504742 6 + 17725628 TGTCGC i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 37541 6 - 3732694 TGTCGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478849 6 - 608964 catcat i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29115752 6 + 31377067 TGGCCT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3950757 6 + 6579706 TGTCAT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e cebCap1.NW_016107444v1 480166 18 - 6778120 I a score=647737.000000 s hg38.chr3_KI270779v1_alt 193108 72 + 205312 CC-CCGAGTCACCGGCCAGGTCGGGCCATCTAGGGAAACTGGAGAGTG-------TTAACTCCGC-AGTT-ACAGCCTTCT-G s panTro5.chr3 200180546 72 + 202621043 CC-CCGAGTCACCGGCCAGGTCGGGCCATCTAGGGAAACTGGAGAGTG-------CTAACTCCGC-AGTT-ACAGCCTTCT-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137170 72 + 190779 CC-CCGAGTCACCGGCCAGGTCGGGCCATCTAGGGAAACTGGAGAGTG-------CTAACTCCGC-AGTT-ACAGCCTTCT-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27732 72 - 189199 CC-CCGAGTCACCGGCAAGGTCGGGCCATCTAGGGAAACTGGAGAGTG-------CTAACTCCGC-AGTT-ACAGCCTTCT-G i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946266 72 + 123690457 CC-CCGAGTCACGGGCCAGGTCAGGCCATCTAGGGAAACTGGAGCGTG-------CTAACTCCGC-AGTT-ACAGCCTTCC-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520878 72 + 204787373 CC-CCGAGTCACGGGCCAGGTCAGGCCATCTGGTGAAACTGGAGAGTG-------CTAACTCCAC-AATC-ACAGCTTTCC-G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126306 72 + 192460366 CC-CCGAGTCACGGGCCAGGTCAGGCCATCTGGTGAAACTGGAGAGTG-------CTAACTCCAC-AATC-ACAGCTTTCC-G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612701 72 + 19675229 CC-CCGAGTCACGGGCCAGGTCAGGCCATCTGGTGAAACTGGAGAGTA-------CTAACTCCAC-AATC-ACAGCTTTCC-G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544898 72 + 16847902 CC-CCGAGTCACAGGCCAGGTCGGGCCATCTGGTGAAACTGGAGAGTG-------CTAACTCCAC-AATC-ACAGCTTTCC-G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475724 72 - 91754291 CC-CCGAGTCACGGGCCAGGTCAGGCCATCTGGTAAAACTGGAGAGTG-------CTAACTCCAC-AATC-ACAGCTTTCC-G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659801 72 - 1977891 CC-CCGAGTCACAGGCCAGGTCGGGCCATCTGGTGAAACTGGAGAGTG-------CTAACTCCAC-AATC-ACAGCTTTCC-G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523570 71 + 7796314 CT-CCGAGTCACGGGCCAGGTCGGGCCAT-TGGTGAAACTGGAGAGTG-------CTAACCCCAC-AATC-ACAGCTTTCC-G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987095 71 - 74750902 -CACTGAGTCACGGGC-AGGTCGGGTGATCTAGGGAAACTGGAGAATG-------CTAACTCCCT-GGTC-ACAGTTTTCT-G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504748 68 + 17725628 -C-CTGAGTCACGGGC-AGGTTGGGTGATCCAGGGAAAC--GAGAGTG-------CTGACTCCCC-AGTC-ACAGTTTTCC-G i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480184 71 - 6778120 CC-CTGAGTCACGGGC-AGGTTGGGTGATCTAGGAGAACTGGAGAGTG-------CTACCTCCCC-AGTC-ACGGTTTTCC-G i cebCap1.NW_016107444v1 I 18 C 0 s aotNan1.NW_018507959v1 37547 46 - 3732694 -CACTGAGTCACGGGC-AGGTCGGGTGA--------------------------------TCCCC-AGTC-ACAGTTTTCT-G i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478855 73 - 608964 ca-atgagtcacaagcctggctgagtgatcaactgaaaccagagactg-------ctaattccCT-GATC-ACatttttcctg i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29115758 73 + 31377067 CG-CGGAGTCACTGTCCAGGCTGGGCGATGAGGCGAATCGGGAGACCG-------TGAGCTCCCCTGATC-ACTCGGGCAC-A i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3950763 80 + 6579706 CA-CTGAGTCACGGGCCAGATTGGGCGATCAAGAGAAACTGGAGAGCgggcaggtttagttcagt-ggttgagtgcctgct-g i dasNov3.JH569502 C 0 I 130 e mm10.chr16 65474291 1552 - 98207768 I a score=862725.000000 s hg38.chr3_KI270779v1_alt 193180 98 + 205312 GGCCACACACT--GTCCcaaagctggaatttgagctctgttctgcctggctccaaag----cAAAAGAAGGGCA-------------------------------------------------ATCACCTGGGCTGACCGC-CCACGACATCCT s panTro5.chr3 200180618 98 + 202621043 GGCCACACACT--GTCCcaaagctggaatttgagctctgttctgcctggctccaaag----cAAAAGAAGGGCA-------------------------------------------------ATCACCTGGGCTGAGCGC-CCATGACATCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137242 98 + 190779 GGCCACACACT--GTCCcaaagctggaatttgagctctgttctgcctggctccaaag----cAAAAGAAGGGCA-------------------------------------------------ATCACCTGGGCTGAGCGC-CCACGACATCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27804 98 - 189199 GGCCACGCACT--GTCCcaaagctggaatttgagctctgttctgcctggctccaaag----cAAAAGAAGGGCA-------------------------------------------------ATCACCTGGGCTGAGCAC-CCACGACATCCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946338 98 + 123690457 GGCCACACACT--GTCCcgaagctggaatttgagctctgttctgcctggctccaaag----cAAAAGAAGGGCA-------------------------------------------------GTCACCTGGGCTGAGCGC-CCACGACATCGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202520950 134 + 204787373 GACCACACACTAAGTCACAGAGCTGGAATTTGAGC---------------TCCAAAG----CAAAAGAAGGACATCACCTGGGCTGAGCGCCCACGACATCCTCCGCTCCAGGCCATCTCCCGATCACCTGGGCTGAGCGC-CCACGACATCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126378 84 + 192460366 GACCACACACTAAGTCACAGAGCTGGAATTTGAGC---------------TCCAAAG----CAAAAGAAGGAC--------------------------------------------------ATCACCTGGGCTGAGCGC-CCACGACATCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612773 84 + 19675229 GACCACACACTAAGTCACAGAGCTGGAATTTGAGC---------------TCCAAAG----CAAAAGAAGGAC--------------------------------------------------ATCACCTGGGCTGAGCGC-CCACGACATCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 544970 99 + 16847902 GACCACACACtaagtcacagagctggaatctgagctccgttctgcctggttccaaag----cAAAAGAAGGAC--------------------------------------------------ATCACCTGGGCTGAGCAC-CCACGACATCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475796 99 - 91754291 GACCACACACtaagtcacagagctggaatttgagttccattctgcctggttccaaag----cAAAAGAAGGAC--------------------------------------------------ATCACCTGGGCTGAGTGC-CCACGACATCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659873 99 - 1977891 GACCACACACtaagtcacagagctggaatctgagctccgttctgcctggttccaaag----cAAAAGAAGGAC--------------------------------------------------ATCACCTGGGCTGAGCGC-CCACGACATCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523641 84 + 7796314 GACCACACACTAAGTCACAGAGCTGGAATTTGAGC---------------TCCAAAG----CAAAAGAAGGGC--------------------------------------------------ATCACCTGGGCTGAGCGC-CCACAACATCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987166 100 - 74750902 ggccacacaataagccacaaagctggcatttcagctctgttctgcctggccccaaag----cAAAAGAAGGGCA-------------------------------------------------ATCACCTGGGCTGAGCAC-GCACGACATCCT i calJac3.chr17 C 0 I 20 s saiBol1.JH378146 504816 100 + 17725628 GGCCACACGATAAACCGCAAAGCTGGAACTTCACCTCTGTTCTGCCTGGCCCCAAAG----CAAAGGCAGGGCA-------------------------------------------------GTCACCTGGGCGGAGCGC-TCACGACACCCT i saiBol1.JH378146 C 0 I 20 s cebCap1.NW_016107444v1 480255 100 - 6778120 GGCCACGCaataagccacaaagctggaatttcagctctgttctgcctggccccaaag----cAAAAGAAGGGCA-------------------------------------------------GTCACCTGGGCTGAGCGC-TCACGACATCCT i cebCap1.NW_016107444v1 C 0 I 31 s aotNan1.NW_018507959v1 37593 100 - 3732694 ggtcacacagtaagccataaagctggaatttcagctctgttctgcctggccccaaag----cAGAAGAAGGGCA-------------------------------------------------GTCACCTGGGCTGAGCGT-TTACGACATCCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 478928 92 - 608964 agtcgcatactaagtcacaaaactggagtgtgagctcaggtctgcctggctctgaagGAAAAAAAAAAAAGGAA-------------------------------------------------TTAACCTGGACT-AGTGC-T----------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29115831 88 + 31377067 GGCCACGCAGG-AGTCCCGGAGCTGTA----GGGC---AGCCCAGGCGGCCTCCGGG----CTCAGGAGGGGA--------------------------------------------------CGGAACCGAGCCCAGTGCTCCACGGAA---- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3950973 100 + 6579706 ggccacacagcaaggcacaacgttggaatttgagcccaggtctgcctggctcaaaag----cACAAGAAAGGAA-------------------------------------------------TTAACACTGGCCAAGTAT-TCACTATATGCT i dasNov3.JH569502 I 130 C 0 e mm10.chr16 65474291 1552 - 98207768 I a score=1135715.000000 s hg38.chr3_KI270779v1_alt 193278 149 + 205312 TCGCTCCGGGTCCTTTCCCGGTGGCA--GGTGGAGA-----CGGccttttggaggggcctcgctgtccagctgcaaggatagtggttagtggacagctcccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctc------atgctcttct s panTro5.chr3 200180716 149 + 202621043 TCGCTCCGGGTCCTTTCCCACTGGCA--GGTGGAGA-----CAGccttttggaggggcctcgctgtccagctgcaaggatagtggttagtggacagcccccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctc------atgctcttct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137340 149 + 190779 TCGCTCCGGGTCCTTTCCCGGTGGCA--GGTGGAGA-----CAGccttttggaggggcctcgctgtccagctgcaaggatagtggttagtggacagcccccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctc------atgctcttct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 27902 149 - 189199 TCACTCCAGGTCCTTTCCCGGTGGCA--GGTGGAGA-----CGGccttttggaggggcctcgctgtccagctgcaaggatagtggttagtggacagcccccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctc------atgctcttct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946436 148 + 123690457 T-ATTCCAGGTCCTTTCCCGGTGGCA--GGCGGAGA-----CGGcctttcggaggggcctcgctgtccagctgcaaggatagtggttagtggacagcccccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctc------atgctcttct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521084 150 + 204787373 CCACTCCGGGCCATTTCCCGGTGGCA--GGTGGAGA-----CGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacattcctcagctgctggcccctgcagggtgggccttggcttttatgctgagctc------atgctcttct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126462 150 + 192460366 CCGCTCTGGGCCATTTCCCGGTGGCA--GGTGGAGA-----CGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacattcctcagctgctggcccctgcagggtgggccttggcttttatgctgagctc------atgctcttct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 612857 150 + 19675229 CCGCTCCGGGCCATTTCCCGGTGGCA--GGTGGAGA-----CGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacatcccccagctgctggcccctgcagggtgggccttggcttttatgctgagctc------atgcttttct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545069 150 + 16847902 CCGCTCCAGGCCATTTCCCGGTGGCA--GGTGGAGA-----CGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacatcccccagctgctggcccctgcagggtgggccttggcttttatgctgagctc------atgctcttct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 475895 150 - 91754291 CCACTCCAGGCCATTTCCCGGTGGCA--GGTGGAGA-----CGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacatcccccagctgctggcccctgcagggtgggccttggcttttatgctgagctc------atgctcttct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 659972 150 - 1977891 CCGCTCCAGGCCATTTCCCGGTGGCA--GGTGGAGA-----CGAcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacatcccccagctgctggcccctgcagggtgggccttggcttttatgctgagctc------atgctcttct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523725 150 + 7796314 CCGCTCCGGGCCATTTCCCAGTGGCA--GGTGGAGA-----CGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacatcccccagctgctggcccctgcaggctgggccttggcttttatgctgagctc------atgctcttct i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 37693 148 - 3732694 TCGCTCTGGGTCATTTCCCGGTGGCA--GGTGGAGA-----CGGccttttggaggggacttgctgtccagctgcaaggacggtggctagtggacagcctccagctgccggcccctgcagg--gggccttggcttttatgctgagctc------atgcgcttct i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479020 152 - 608964 TAGCTGTATGTGGCTTCCCCATGGCAGCGATGGAGA-----TAGccttcaagagaggacttgctgtccagctgcaaagacagtggttagtggacagcttccagtggttggcttcttgggggcagggctcagcttttaagctgagatc------atgttcttct i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29115919 111 + 31377067 -------------------GGGCGCC--GGCAGGGA-----GGGC---------------tgctgcccagctgcacaggt-gtgatgagttgacaccttcc-gcttctagctccttcgcggtgcacctcagctctcaa---aacctc------gcgctcttcT i canFam3.chr33 C 0 I 98 s dasNov3.JH569502 3951073 116 + 6579706 -------------------TCTGGCA--GACAGGGAACTGCACACCTTCTAGAAAGGACTGGCTGTC--------------------------CTTTctctagctgttagtaccttaaggatgcatctcagcttccaagctgagatccagattaagctctttt i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=1021941.000000 s hg38.chr3_KI270779v1_alt 193427 137 + 205312 -ccaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccc-cacaagactccgccaacaggcagtc--tgcccctcagagcgccccat-ggg-----caggagctttgtggctgtgtcagct s panTro5.chr3 200180865 137 + 202621043 -ccaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccc-cacaagactccgccaacaggcggtc--tgcccctcagagcgtcccgt-ggg-----caggagctttgtggctgtgtcagct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137489 137 + 190779 -ccaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccc-cacaagactccgccaacaggcggtc--tgcccctcagagcgtcccgt-ggg-----caggagctttgtggctgtgtcagct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28051 137 - 189199 -ccaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccc-cacaagactccgccaacaggcgatc--tgcccctcagagcgccccat-ggg-----caggagctttgtggctgtgtcagct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946584 134 + 123690457 -ccaggtgaccctgtggctgatgactcagcaaagtggcatcgcagtgacctcaccatttccacc----caagacttctccagcaagcggtc--tgcccctcagagcaccccat-gag-----caggagctatgtggctgtgtcagct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521234 137 + 204787373 -ccagaagaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccc-cacaagactcctccaacaggcgatc--tGCCCCTCAGAGCATCCCAC-AAG-----CAGGAGCTTTGTGGCTGTGTCAGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126612 137 + 192460366 -ccagaagaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccc-cacaagactcctccaacaggcgatc--tGCCCCTCAGAGCATCCCAC-AAG-----CAGGAGCTTTGTGGCTGTGTCAGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613007 137 + 19675229 -ccagaagaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccc-cacaagactcctccaacaggcgatc--tGCCCCTCAGAGCATCCCAC-AAG-----CAGGAGCTTTGTGGCTGTGTCAGCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545219 137 + 16847902 -ccagatgaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccc-cacaagactcctccaacaggcgatc--tgcccctcagagcatcccac-gag-----caggagctttgtggctgtgtcaggt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476045 137 - 91754291 -ccagatgaccctatggccgatgactaagcaaagtggcctcgcagtgacctcaacattttcaccc-cacaagactcctccaacaggcgatc--tgcccctcagagcatcccac-gag-----caggagctttgtggctgtgtcagct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660122 137 - 1977891 -ccagatgaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccc-cacaagactcctccaacaggtgatc--tgcccctcagagcatcccac-gag-----caggagctttgtggctgtgtcagct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 523875 137 + 7796314 -ccagatgaccctatggccaatgactaagcaaagtggcatcacagtgacctcaacgtttccaccc-cacaagactcctccaacaggcagtc--tGCCCCTCAGAGCGTCCCAT-GAG-----CAGGAGCTTTGTGGCTGTGTCAGCT i colAng1.NW_012118932v1 C 0 I 42 s aotNan1.NW_018507959v1 37841 137 - 3732694 -ccaggtgaccctgtggcc-atgactaagcaaagtggcatcgcagtgaccccaccatttccaccc-cccgagactcctccaacaggcggtg--agcccctcagagcaccccatagag-----caggggctttgtggctgtgtcagct i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479172 131 - 608964 -ctggaagaccccttggccaaagactgaacaaggaggtagcacag-ggccttgtcatgttcaccc-tgtgggact------gtagggaatg--tgcacctcagagcaccccacaggg-----cagggactttgtggctttgtgagct i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3951189 146 + 6579706 ggggagtaacccttggaccaatgactgagcaaggcagtggtgagaggacgtggccatttccacccacgtgggactcctctaacagttggtccgtgctccccagagcaccccat-ggggccaacagagactttgcagttttgtcaagt i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=117025.000000 s hg38.chr3_KI270779v1_alt 193564 19 + 205312 ----gtgcc------acatcctcctg-ccc-- s panTro5.chr3 200181002 19 + 202621043 ----gtgcc------acatcctcctg-ccc-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137626 19 + 190779 ----gtgcc------acatcctcctg-ccc-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28188 20 - 189199 ----gtgcc------acatcctcctgcccc-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946718 19 + 123690457 ----gtgcc------acatcctcctg-ccc-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521371 19 + 204787373 ----GTGCT------ACGTCCTCCCG-CCC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126749 19 + 192460366 ----GTGCT------ACGTCCTCCCG-CCC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613144 19 + 19675229 ----GTGCT------ACGTCCTCCCG-CCC-- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545356 19 + 16847902 ----gtgct------atgtcctcccg-ccc-- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476182 19 - 91754291 ----gtgcc------gcgtcctcccg-ccc-- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660259 19 - 1977891 ----gtgct------atgtcctcccg-ccc-- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524054 19 + 7796314 ----GTGCC------ATGTCCTCCTG-CCC-- i colAng1.NW_012118932v1 I 42 C 0 s aotNan1.NW_018507959v1 37978 19 - 3732694 ----ccgcc------acatcctcctg-ccc-- i aotNan1.NW_018507959v1 C 0 I 224 s otoGar3.GL873829 479303 19 - 608964 ----ctgcc------atgtcctcctg-cct-- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3951335 31 + 6579706 ctgcatgaccggctgatggctccccg-ggctg i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=59960.000000 s hg38.chr3_KI270779v1_alt 193583 10 + 205312 agccc-ggcct s panTro5.chr3 200181021 10 + 202621043 ggccc-ggcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137645 10 + 190779 ggccc-ggcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28208 11 - 189199 agcccgggcct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946737 10 + 123690457 ggccc-ggcct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521390 10 + 204787373 GGCCT-GGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126768 10 + 192460366 GGCCC-GGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613163 10 + 19675229 GGCCC-GGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545375 10 + 16847902 ggccc-ggcct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476201 10 - 91754291 ggccc-gccct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660278 10 - 1977891 ggccc-ggcct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524073 10 + 7796314 GGCCC-GGCCT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479322 10 - 608964 aatcc-tgcct i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3951366 10 + 6579706 catcc-tgtct i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=28332.000000 s hg38.chr3_KI270779v1_alt 193593 4 + 205312 cctt s panTro5.chr3 200181031 4 + 202621043 cctt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137655 4 + 190779 cctt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28219 4 - 189199 cctt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946747 4 + 123690457 cctt i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521400 4 + 204787373 CCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126778 4 + 192460366 CCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613173 4 + 19675229 CCTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545385 4 + 16847902 cctt i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476211 4 - 91754291 cctt i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660288 4 - 1977891 cctt i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524083 4 + 7796314 CCTT i colAng1.NW_012118932v1 C 0 T 45 s otoGar3.GL873829 479332 4 - 608964 cctc i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=36375.000000 s hg38.chr3_KI270779v1_alt 193597 9 + 205312 ------------------cttcttaCA--- s panTro5.chr3 200181035 9 + 202621043 ------------------ctccttACG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137659 9 + 190779 ------------------ctccttACG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28223 9 - 189199 ------------------ctccttACA--- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946751 9 + 123690457 ------------------ctccttaca--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521404 9 + 204787373 ------------------CTCCTTACA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126782 9 + 192460366 ------------------CTCCTTACC--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613177 9 + 19675229 ------------------CTCCTTATG--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545389 9 + 16847902 ------------------ctccctACA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476215 9 - 91754291 ------------------ctccttACG--- i chlSab2.chr15 C 0 T 42 s manLeu1.NW_012102020v1 660292 9 - 1977891 ------------------ctccctaca--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524042 9 + 7796314 ------------------CTCCTTACA--- i colAng1.NW_012118932v1 T 45 C 0 s otoGar3.GL873829 479336 30 - 608964 ccttttttttttttttttttttttataaaa i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=152712.000000 s hg38.chr3_KI270779v1_alt 193606 44 + 205312 CAGGTGCCACATCCTCCT-----------------------GCCCAGCCCGGCCTCCTTCTCCTTAC s panTro5.chr3 200181044 44 + 202621043 CAGGTGCCACATCCTCCT-----------------------GCCCAGCCCGGCCTCCTTCTCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137668 44 + 190779 CAGGTGCCACATCCTCCT-----------------------GCCCAGCCCGGCCTCCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28232 44 - 189199 CAGGTGCCACATCCTCCT-----------------------GCCCGGCCCGGCCTCCTTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521413 44 + 204787373 CAGGTGCCACGTCCTCCC-----------------------ACCCGGCCCGGCCTCCTTCTCCTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126791 44 + 192460366 CAGGTGCCACGTCCTCCC-----------------------GCCCGGCCCGGCCTCCTTCTCCCTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613186 44 + 19675229 CAAGTGCCACGTCCTCCC-----------------------ACCCGGCCCGGCCTCCTTCTCCTTAC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545398 44 + 16847902 CAGGTGCCACATCCTCCC-----------------------GCCCGGCCCGGCCTCCTTCGCCTTAC i cerAty1.NW_012004056v1 C 0 C 0 s manLeu1.NW_012102020v1 660301 34 - 1977891 caggtgccatatcCTCCC---------------------------------GCCTCCTTCTCCTTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524051 44 + 7796314 CAGGTGCCATGTCCTCCT-----------------------GCCCGGCCCGGCCTCCTTCTCCTTAC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479366 67 - 608964 agggtctcactatcacccttggtagagtgcgtggcatcacagctcatagcaacgtccaactcctggg i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476224 42 - 91754291 T e nomLeu3.chr11 120946760 0 + 123690457 C a score=101327.000000 s hg38.chr3_KI270779v1_alt 193650 35 + 205312 GCAGG---------TGCCACATCCTCCTGCCCAGCCC----GGCCTCC s panTro5.chr3 200181088 35 + 202621043 ACAGG---------TGCCACATCCTCCTGCCCAGCCC----GGCCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137712 35 + 190779 ACAGG---------TGCCACATCCTCCTGCCCAGCCC----GGCCTCC i panPan2.chrUn_NW_014024201v1 C 0 T 90 s gorGor5.CYUI01000254v1 28276 38 - 189199 A-AGG---------TGCCACATCCTCCTGCCCGGCCCCCCAGCCCTCC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521457 35 + 204787373 GCAGG---------TGCCACGTCCTCCCGCCCGGCCC----GGCCTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126835 35 + 192460366 ACAGG---------TGCCACGTCCTCCCGCCTGGCCC----GGCCTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613230 35 + 19675229 ATAGG---------TGCCACATCCTCCTGCCTGGCCC----AGCCTCC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660335 35 - 1977891 ACAGG---------TGCCACGTCCTCCCACCCGGCCC----AGCCTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524095 35 + 7796314 ACAGG---------TGCCACGTCCTCCTGCCCAGCCC----GGCCTCC i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479433 44 - 608964 ctaggcgattctcttgcctcagcctcctgagtagctg----ggactac i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476224 42 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=28996.000000 s hg38.chr3_KI270779v1_alt 193685 10 + 205312 TTCTCCTTAC s panTro5.chr3 200181123 10 + 202621043 TTCTCCTTAC i panTro5.chr3 C 0 I 49 s panPan2.chrUn_NW_014024201v1 137657 10 + 190779 ttctccttAC i panPan2.chrUn_NW_014024201v1 T 90 C 0 s gorGor5.CYUI01000254v1 28314 10 - 189199 TTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521492 10 + 204787373 TTCTCCTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126870 10 + 192460366 TTCTCCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613265 10 + 19675229 TTCTCCTTAC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660370 10 - 1977891 TTCTCCCTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524130 10 + 7796314 TTCTCCTTAA i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479477 2 - 608964 --------ag i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476224 42 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=86702.000000 s hg38.chr3_KI270779v1_alt 193695 45 + 205312 GCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC s panPan2.chrUn_NW_014024201v1 137667 45 + 190779 GCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28324 42 - 189199 -CAGGTGCCACATCCTCCTGCCC-GCCCGGCCTCC-TCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521502 45 + 204787373 ACAGGTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTAC i rheMac8.chr2 C 0 I 1 s macFas5.chr2 126880 45 + 192460366 GCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTAC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 613275 45 + 19675229 GCAGGTGCCACATCCTCCCACCCGGCCCGGCCTCCTTCGCCTTAC i macNem1.NW_012014355v1 C 0 T 44 s manLeu1.NW_012102020v1 660380 35 - 1977891 ACAGGTGCCACATCCTCCC----------GCCTCCTTCTCCTTAC i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 524140 42 + 7796314 ACAGGTGCCACGTCCACCTGCCCGGCCTGGCCTCCT---CCTTAC i colAng1.NW_012118932v1 C 0 I 1 s otoGar3.GL873829 479479 35 - 608964 gcatccgccacaat----------gcccagcttttttttggttac i otoGar3.GL873829 C 0 I 6 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476224 42 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181133 49 + 202621043 I a score=-5764.000000 s hg38.chr3_KI270779v1_alt 193740 2 + 205312 -GC s panPan2.chrUn_NW_014024201v1 137712 2 + 190779 -AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28366 1 - 189199 -C- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521548 1 + 204787373 -C- i rheMac8.chr2 I 1 C 0 s macFas5.chr2 126926 1 + 192460366 -C- i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 613276 1 + 19675229 -C- i macNem1.NW_012014355v1 T 44 C 0 s manLeu1.NW_012102020v1 660416 1 - 1977891 -C- i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 524183 1 + 7796314 -C- i colAng1.NW_012118932v1 I 1 C 0 s otoGar3.GL873829 479520 2 - 608964 gc- i otoGar3.GL873829 I 6 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476224 42 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181133 49 + 202621043 I a score=3555.000000 s hg38.chr3_KI270779v1_alt 193742 2 + 205312 -AG s panTro5.chr3 200181182 2 + 202621043 -AG i panTro5.chr3 I 49 C 0 s panPan2.chrUn_NW_014024201v1 137714 2 + 190779 -AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28367 2 - 189199 -AG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521549 2 + 204787373 -AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126927 2 + 192460366 -AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613277 2 + 19675229 -AG i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660417 2 - 1977891 -AG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524184 2 + 7796314 -AG i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479522 2 - 608964 ca- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476224 42 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=85816.000000 s hg38.chr3_KI270779v1_alt 193744 28 + 205312 GTG-CCACATCCT--CCTGCCCAGCCCGGCC s panTro5.chr3 200181184 28 + 202621043 GTG-CCACATCCT--CCTGCCCAGCCTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137716 28 + 190779 GTG-CCACATCCT--CCTGCCCAGCCCGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28369 30 - 189199 GTGCCCACATcct-ccctgcccagcccggcc i gorGor5.CYUI01000254v1 C 0 I 3 s rheMac8.chr2 202521551 27 + 204787373 GTG-CCACGTCCT--CCCGCCCGGCCC-GCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126929 28 + 192460366 GTG-CCACGTCCT--CCCGCCCGGCCCGGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613279 28 + 19675229 GTG-CCACATCCT--CCCACCCGGCCCGGCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476182 28 - 91754291 gtg-ccgcgtcct--cccgcccggcccgccc i chlSab2.chr15 T 42 C 0 s manLeu1.NW_012102020v1 660419 28 - 1977891 GTG-CCACGTCCT--CCTGCCCGGCCTGGTC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524186 28 + 7796314 GTG-CCACGTCCT--CCCGCCTGACGCGGCc i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479524 20 - 608964 ggg-ccaggttcaaacccgcc---------- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=36385.000000 s hg38.chr3_KI270779v1_alt 193772 13 + 205312 T----CCTTCTC---------CTTAC s panTro5.chr3 200181212 17 + 202621043 TCCGCCCTTCTC---------CTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137744 13 + 190779 T----CCTTCTC---------CTTAC i panPan2.chrUn_NW_014024201v1 C 0 T 131 s gorGor5.CYUI01000254v1 28402 22 - 189199 ----ccctTCTCCATCCCTTTCTTAC i gorGor5.CYUI01000254v1 I 3 C 0 s rheMac8.chr2 202521578 13 + 204787373 ----TCCTTCTC---------CCTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126957 13 + 192460366 ----TCCTTCTC---------CTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613307 13 + 19675229 ----TCCTTCGC---------CTTAC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476210 13 - 91754291 ----tccttctc---------cttAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660447 13 - 1977891 ----TCCTTCTC---------CCTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524214 13 + 7796314 ----tccttctc---------cttac i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479544 13 - 608964 ----accttctg---------tatat i otoGar3.GL873829 C 0 I 3 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=1219.000000 s hg38.chr3_KI270779v1_alt 193785 1 + 205312 G s rheMac8.chr2 202521591 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126970 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613320 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476223 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660460 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524227 1 + 7796314 g i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479560 1 - 608964 g i otoGar3.GL873829 I 3 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137757 131 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28424 0 - 189199 C e panTro5.chr3 200181229 0 + 202621043 C a score=11250.000000 s hg38.chr3_KI270779v1_alt 193786 3 + 205312 CAG s panTro5.chr3 200181229 3 + 202621043 CAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28424 3 - 189199 CAG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521592 3 + 204787373 CAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126971 3 + 192460366 CAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613321 3 + 19675229 CAG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476224 3 - 91754291 CAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660461 3 - 1977891 CAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524228 3 + 7796314 cag i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479561 3 - 608964 ccg i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137757 131 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=34150.000000 s hg38.chr3_KI270779v1_alt 193789 7 + 205312 GTGCCAC s panTro5.chr3 200181232 7 + 202621043 GTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137626 7 + 190779 gtgccac i panPan2.chrUn_NW_014024201v1 T 131 C 0 s gorGor5.CYUI01000254v1 28427 7 - 189199 GTGCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521595 7 + 204787373 GTGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126974 7 + 192460366 GTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613324 7 + 19675229 GTGCCAC i macNem1.NW_012014355v1 C 0 T 180 s chlSab2.chr15 476227 7 - 91754291 GTGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660464 7 - 1977891 GTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524231 7 + 7796314 gtgccac i colAng1.NW_012118932v1 C 0 T 226 s otoGar3.GL873829 479564 7 - 608964 gtgccct i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=18436.000000 s hg38.chr3_KI270779v1_alt 193796 8 + 205312 ATCCTCCT- s panTro5.chr3 200181239 8 + 202621043 ATCCTCCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137633 8 + 190779 atcctcct- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28434 8 - 189199 ATCCTCCT- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521602 8 + 204787373 GTCCTCCC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126981 8 + 192460366 GTCCTCCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613151 8 + 19675229 GTCCTCCC- i macNem1.NW_012014355v1 T 180 C 0 s chlSab2.chr15 476234 8 - 91754291 ATCCGCCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660471 8 - 1977891 ATCCTCCC- i manLeu1.NW_012102020v1 C 0 T 205 s otoGar3.GL873829 479571 8 - 608964 -ccccactg i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 226 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=21588.000000 s hg38.chr3_KI270779v1_alt 193804 8 + 205312 -GCC-CAGCC- s panTro5.chr3 200181247 8 + 202621043 -GCC-CAGCC- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137641 8 + 190779 -gcc-cggcc- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28442 8 - 189199 -GCC-CAGCC- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521610 8 + 204787373 -ACC-CGGCC- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126989 8 + 192460366 -GCC-CGGCC- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613159 8 + 19675229 -GCC-CGGCC- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476242 8 - 91754291 -GCC-CGGCC- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660274 8 - 1977891 -gcc-cggcc- i manLeu1.NW_012102020v1 T 205 C 0 s otoGar3.GL873829 479579 11 - 608964 agccacaggcg i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 226 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=18204.000000 s hg38.chr3_KI270779v1_alt 193812 6 + 205312 CGGCCT s panTro5.chr3 200181255 6 + 202621043 TGGCCT i panTro5.chr3 C 0 I 4 s panPan2.chrUn_NW_014024201v1 137649 6 + 190779 cggcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202521618 6 + 204787373 CGGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 126997 6 + 192460366 CGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613167 6 + 19675229 CGGCCT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476250 6 - 91754291 CGGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660282 6 - 1977891 cggcct i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 479590 6 - 608964 cagccc i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 226 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28450 0 - 189199 C a score=41596.000000 s hg38.chr3_KI270779v1_alt 193818 12 + 205312 ------CCTTCTCCCTAC s panTro5.chr3 200181265 12 + 202621043 ------CCTTCTCCTTAC i panTro5.chr3 I 4 T 144 s panPan2.chrUn_NW_014024201v1 137655 12 + 190779 ------ccttctccttAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28450 12 - 189199 ------CCCTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521624 12 + 204787373 ------CCTTCTCCCTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127003 12 + 192460366 ------CCTTCTCCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613173 12 + 19675229 ------CCTTCTCCTTAT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476256 12 - 91754291 ------CCTTCTCCCTAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660288 12 - 1977891 ------ccttctccctac i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 479596 18 - 608964 tctcttcccttttcttac i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 226 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=808.000000 s hg38.chr3_KI270779v1_alt 193830 1 + 205312 G s panPan2.chrUn_NW_014024201v1 137667 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202521636 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127015 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613185 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476268 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660300 1 - 1977891 a i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 479614 1 - 608964 g i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 226 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28462 0 - 189199 C e panTro5.chr3 200181277 144 + 202621043 T a score=5059.000000 s hg38.chr3_KI270779v1_alt 193831 3 + 205312 CAG s panTro5.chr3 200181133 3 + 202621043 CAG i panTro5.chr3 T 144 C 0 s panPan2.chrUn_NW_014024201v1 137668 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01000254v1 28462 1 - 189199 -A- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521637 3 + 204787373 CAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127016 3 + 192460366 TAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613186 3 + 19675229 CAA i macNem1.NW_012014355v1 C 0 T 45 s chlSab2.chr15 476269 3 - 91754291 CAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660301 3 - 1977891 cag i manLeu1.NW_012102020v1 C 0 C 0 s otoGar3.GL873829 479615 3 - 608964 cag i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 226 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=41645.000000 s hg38.chr3_KI270779v1_alt 193834 12 + 205312 GTGCCACATCCT s panTro5.chr3 200181136 12 + 202621043 GTGCCACATCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137626 12 + 190779 gtgccacatcct i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000254v1 28463 10 - 189199 GTGCC-CATCC- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521640 12 + 204787373 GTGCCACATCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127019 12 + 192460366 GTGCCACATCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613144 12 + 19675229 GTGCTACGTCCT i macNem1.NW_012014355v1 T 45 C 0 s chlSab2.chr15 476272 12 - 91754291 GTGCCACATCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660304 12 - 1977891 gtgccatatcCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524012 12 + 7796314 GTGCCACGTCCT i colAng1.NW_012118932v1 T 226 C 0 s otoGar3.GL873829 479618 12 - 608964 gtgttacttcct i otoGar3.GL873829 C 0 I 259 e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=16010.000000 s hg38.chr3_KI270779v1_alt 193846 6 + 205312 CCTGCC s panTro5.chr3 200181148 6 + 202621043 CCTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137638 6 + 190779 cctgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28473 6 - 189199 CCTGCC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521652 2 + 204787373 CC---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127031 6 + 192460366 CCTGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613156 6 + 19675229 CCCGCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476284 6 - 91754291 CCCGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660316 6 - 1977891 CCCGCC i manLeu1.NW_012102020v1 C 0 I 80 s colAng1.NW_012118932v1 524024 6 + 7796314 CCCGCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=22238.000000 s hg38.chr3_KI270779v1_alt 193852 10 + 205312 CAGCCCGGCC s panTro5.chr3 200181154 10 + 202621043 CAGCCTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137644 10 + 190779 cggcccggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28479 10 - 189199 CAGCCCGGCC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521654 3 + 204787373 -------GCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127037 10 + 192460366 TGGCCCAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613162 10 + 19675229 CGGCCCGGCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476290 10 - 91754291 CGGCCTGGCc i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 524030 10 + 7796314 TGGCCTGGCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660322 80 - 1977891 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=45938.000000 s hg38.chr3_KI270779v1_alt 193862 17 + 205312 T----CCTTCTCCTTACGCAG s panTro5.chr3 200181164 20 + 202621043 TCCGCCCTTCTCCTTACG-AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137654 17 + 190779 t----ccttctccttACGCAG i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01000254v1 28489 16 - 189199 T----CCTTCTCCTTACC-AG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521657 17 + 204787373 T----CCTTCTCCTTACACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127047 17 + 192460366 T----CCTTCTCCTTACGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613172 17 + 19675229 T----CCTTCTCCTTATGCAA i macNem1.NW_012014355v1 C 0 T 45 s chlSab2.chr15 476300 17 - 91754291 t----ccttctccttacacag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660402 17 - 1977891 T----CCTTCTCCTTACGCAG i manLeu1.NW_012102020v1 I 80 C 0 s colAng1.NW_012118932v1 524040 14 + 7796314 -------TCCTCCTTACACAG i colAng1.NW_012118932v1 C 0 T 42 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=29511.000000 s hg38.chr3_KI270779v1_alt 193879 7 + 205312 GTGCCAC s panTro5.chr3 200181184 7 + 202621043 GTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137626 7 + 190779 gtgccac i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000254v1 28505 7 - 189199 GTGCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521674 7 + 204787373 GTGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127064 7 + 192460366 GTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613144 7 + 19675229 GTGCTAC i macNem1.NW_012014355v1 T 45 C 0 s chlSab2.chr15 476317 7 - 91754291 gtgccac i chlSab2.chr15 C 0 T 113 s manLeu1.NW_012102020v1 660419 7 - 1977891 GTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524012 7 + 7796314 GTGCCAC i colAng1.NW_012118932v1 T 42 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=89970.000000 s hg38.chr3_KI270779v1_alt 193886 34 + 205312 ATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTAC s panTro5.chr3 200181191 38 + 202621043 ATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137633 34 + 190779 atcctcctgcccggcccggcct----ccttctccttAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28512 34 - 189199 Atcctcctgcccagcccggcct----ccttctccttaa i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521681 34 + 204787373 GTCCTCCCGCCTGGCCCGGCCT----CCTTCTCCTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127071 34 + 192460366 ATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTAC i macFas5.chr2 C 0 T 90 s macNem1.NW_012014355v1 613151 34 + 19675229 GTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCTTAT i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660426 34 - 1977891 GTCCTCCTGCCCGGCCTGGTCT----CCTTCTCCCTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524019 31 + 7796314 GTCCTCCCGCCTGGCCTGGCCT----CCT---CCTTAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=7995.000000 s hg38.chr3_KI270779v1_alt 193920 4 + 205312 GCAG s panTro5.chr3 200181229 3 + 202621043 -CAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137667 4 + 190779 GCAG i panPan2.chrUn_NW_014024201v1 C 0 T 45 s gorGor5.CYUI01000254v1 28546 4 - 189199 gcag i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521715 4 + 204787373 ATAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127015 4 + 192460366 ATAG i macFas5.chr2 T 90 C 0 s macNem1.NW_012014355v1 613185 4 + 19675229 GCAA i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660460 4 - 1977891 ACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524050 4 + 7796314 ACAG i colAng1.NW_012118932v1 C 0 T 42 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=24552.000000 s hg38.chr3_KI270779v1_alt 193924 7 + 205312 GTGCCAC s panTro5.chr3 200181232 7 + 202621043 GTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137626 7 + 190779 gtgccac i panPan2.chrUn_NW_014024201v1 T 45 C 0 s gorGor5.CYUI01000254v1 28550 7 - 189199 gtgccac i gorGor5.CYUI01000254v1 C 0 T 338 s rheMac8.chr2 202521719 7 + 204787373 GTGCCAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127019 7 + 192460366 GTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613189 7 + 19675229 GTGCCAC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660464 7 - 1977891 GTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524012 7 + 7796314 GTGCCAC i colAng1.NW_012118932v1 T 42 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=18134.000000 s hg38.chr3_KI270779v1_alt 193931 8 + 205312 ATCCTCCT s panTro5.chr3 200181239 8 + 202621043 ATCCTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137633 8 + 190779 atcctcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202521726 8 + 204787373 ATCCTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127026 8 + 192460366 ATCCTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613196 8 + 19675229 GTCCTCCC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660471 8 - 1977891 ATCCTCCC i manLeu1.NW_012102020v1 C 0 T 157 s colAng1.NW_012118932v1 524019 8 + 7796314 GTCCTCCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=20958.000000 s hg38.chr3_KI270779v1_alt 193939 13 + 205312 GCCCAGCCCGGCC s panTro5.chr3 200181247 13 + 202621043 GCCCAGCCTGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137641 13 + 190779 gcccggcccggcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202521734 13 + 204787373 GCCTGGCCCAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127034 13 + 192460366 GCCTGGCCCAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613204 13 + 19675229 ACCCGGCCCGGCC i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 524027 13 + 7796314 GCCTGGCCTGGCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 157 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=24040.000000 s hg38.chr3_KI270779v1_alt 193952 13 + 205312 T----CCTTCTCCTTAC s panTro5.chr3 200181260 17 + 202621043 TCCGCCCTTCTCCTTAC i panTro5.chr3 C 0 T 144 s panPan2.chrUn_NW_014024201v1 137654 13 + 190779 t----ccttctccttAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202521747 13 + 204787373 T----CCTTCGCCTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127047 13 + 192460366 T----CCTTCTCCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613217 13 + 19675229 T----CCTTCTCCTTAC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660322 13 - 1977891 T----CCTTCTCCTTAC i manLeu1.NW_012102020v1 T 157 C 0 s colAng1.NW_012118932v1 524040 10 + 7796314 -------TCCTCCTTAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=501.000000 s hg38.chr3_KI270779v1_alt 193965 1 + 205312 G s panPan2.chrUn_NW_014024201v1 137667 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s rheMac8.chr2 202521760 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127060 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613230 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660335 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524050 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T e panTro5.chr3 200181277 144 + 202621043 T a score=7231.000000 s hg38.chr3_KI270779v1_alt 193966 3 + 205312 CAG s panTro5.chr3 200181133 3 + 202621043 CAG i panTro5.chr3 T 144 C 0 s panPan2.chrUn_NW_014024201v1 137668 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 C 0 T 45 s rheMac8.chr2 202521761 3 + 204787373 CAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127061 3 + 192460366 CAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613231 3 + 19675229 TAG i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660336 3 - 1977891 CAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524051 3 + 7796314 CAG i colAng1.NW_012118932v1 C 0 T 42 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=87916.000000 s hg38.chr3_KI270779v1_alt 193969 41 + 205312 GTGCCACATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTAC s panTro5.chr3 200181136 45 + 202621043 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137626 41 + 190779 gtgccacatcctcctgcccggcccggcct----ccttctccttAC i panPan2.chrUn_NW_014024201v1 T 45 C 0 s rheMac8.chr2 202521764 41 + 204787373 GTGCCACATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127064 41 + 192460366 GTGCCACATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613234 41 + 19675229 GTGCCACATCCTCCTGCCTGGCCCAGCCT----CCTTCTCCTTAC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660339 41 - 1977891 GTGCCACGTCCTCCCACCCGGCCCAGCCT----CCTTCTCCCTAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524012 38 + 7796314 GTGCCACGTCCTCCCGCCTGGCCTGGCCT----CCT---CCTTAC i colAng1.NW_012118932v1 T 42 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=17248.000000 s hg38.chr3_KI270779v1_alt 194010 11 + 205312 GCAGGTGCCAC s panTro5.chr3 200181181 10 + 202621043 G-AGGTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137667 11 + 190779 GCAGGTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127105 11 + 192460366 GCAGGTGCCAC i macFas5.chr2 C 0 T 90 s macNem1.NW_012014355v1 613275 11 + 19675229 GCAGGTGCCAC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660380 11 - 1977891 ACAGGTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524050 11 + 7796314 ACAGGTGCCAT i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=19615.000000 s hg38.chr3_KI270779v1_alt 194021 11 + 205312 ATCCTCCTGCC s panTro5.chr3 200181191 11 + 202621043 ATCCTCCTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137678 11 + 190779 ATCCTCCTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127026 11 + 192460366 ATCCTCCTGCC i macFas5.chr2 T 90 C 0 s macNem1.NW_012014355v1 613286 11 + 19675229 ATCCTCCCACC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660391 11 - 1977891 ATCCTCCCGCC i manLeu1.NW_012102020v1 C 0 I 77 s colAng1.NW_012118932v1 524061 11 + 7796314 GTCCTCCTGCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=7329.000000 s hg38.chr3_KI270779v1_alt 194032 7 + 205312 CAGCCCG s panTro5.chr3 200181202 7 + 202621043 CAGCCTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137689 7 + 190779 CAGCCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127037 7 + 192460366 TGGCCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613297 7 + 19675229 CGGCCCG i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 524072 7 + 7796314 CGGCCCG i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660402 77 - 1977891 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=44939.000000 s hg38.chr3_KI270779v1_alt 194039 27 + 205312 GCCT----CCTTCTCCTTACGCAGGTGCCAC s panTro5.chr3 200181209 30 + 202621043 GCCTCCGCCCTTCTCCTTAC-CAGGTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137696 27 + 190779 GCCT----CCTTCTCCTTACACAGGTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127044 27 + 192460366 GCCT----CCTTCTCCTTACGCAGGTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613304 27 + 19675229 GCCT----CCTTCGCCTTACGCAGGTGCCAC i macNem1.NW_012014355v1 C 0 T 45 s manLeu1.NW_012102020v1 660479 27 - 1977891 GCCT----CATTCTCCTTACGCAGGTGCCAC i manLeu1.NW_012102020v1 I 77 C 0 s colAng1.NW_012118932v1 524079 27 + 7796314 GCCT----CCTTCTCCTTACACAGGTGCCAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=54767.000000 s hg38.chr3_KI270779v1_alt 194066 34 + 205312 ATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTAC s panTro5.chr3 200181239 38 + 202621043 ATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC i panTro5.chr3 C 0 I 144 s panPan2.chrUn_NW_014024201v1 137723 34 + 190779 ATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 T 45 s macFas5.chr2 127071 34 + 192460366 ATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613286 34 + 19675229 ATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTAC i macNem1.NW_012014355v1 T 45 C 0 s manLeu1.NW_012102020v1 660506 34 - 1977891 GTCCTCCCACCCGGCCCAGCCT----CCTTCTCCTTAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524106 34 + 7796314 GTCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTAA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=398.000000 s hg38.chr3_KI270779v1_alt 194100 1 + 205312 A s panPan2.chrUn_NW_014024201v1 137712 1 + 190779 A i panPan2.chrUn_NW_014024201v1 T 45 C 0 s macFas5.chr2 127105 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613320 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660540 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 T 104 s colAng1.NW_012118932v1 524140 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T e panTro5.chr3 200181277 144 + 202621043 I a score=14595.000000 s hg38.chr3_KI270779v1_alt 194101 10 + 205312 CAGGTGCCAC s panTro5.chr3 200181421 10 + 202621043 CAGGTGCCAC i panTro5.chr3 I 144 C 0 s panPan2.chrUn_NW_014024201v1 137713 10 + 190779 CAGGTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127106 10 + 192460366 CAGGTGCCAC i macFas5.chr2 C 0 T 45 s macNem1.NW_012014355v1 613321 10 + 19675229 CAGGTGCCAC i macNem1.NW_012014355v1 C 0 T 90 s colAng1.NW_012118932v1 524141 10 + 7796314 CAGGTGCCAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660541 104 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=13015.000000 s hg38.chr3_KI270779v1_alt 194111 11 + 205312 ATCCTCCTGCC s panTro5.chr3 200181431 11 + 202621043 Atcctcctgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137723 11 + 190779 ATCCTCCTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127071 11 + 192460366 ATCCTCCCACC i macFas5.chr2 T 45 C 0 s macNem1.NW_012014355v1 613241 11 + 19675229 ATCCTCCTGCC i macNem1.NW_012014355v1 T 90 C 0 s colAng1.NW_012118932v1 524151 11 + 7796314 GTCCACCTGCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660541 104 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=23071.000000 s hg38.chr3_KI270779v1_alt 194122 23 + 205312 CAGCCCGGCCTCCTTTTCCTTAC s panTro5.chr3 200181442 23 + 202621043 cagcccggcctccttctccttaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137734 23 + 190779 CAGCCCGGCCTCCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127082 23 + 192460366 CGGCCCGGCCTCCTTCGCCTTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613252 11 + 19675229 TGGCCCAGCCT------------ i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660437 23 - 1977891 CGGCCTGGTCTCCTTCTCCCTAC i manLeu1.NW_012102020v1 T 104 C 0 s colAng1.NW_012118932v1 524162 20 + 7796314 CGGCCTGGCCTCCT---CCTTAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=187.000000 s hg38.chr3_KI270779v1_alt 194145 1 + 205312 A s panTro5.chr3 200181465 1 + 202621043 g i panTro5.chr3 C 0 T 333 s macFas5.chr2 127105 1 + 192460366 G i macFas5.chr2 C 0 C 0 s manLeu1.NW_012102020v1 660460 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524182 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137757 0 + 190779 C e macNem1.NW_012014355v1 613263 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=14595.000000 s hg38.chr3_KI270779v1_alt 194146 10 + 205312 CAGGTGCCAC s panTro5.chr3 200181133 10 + 202621043 CAGGTGCCAC i panTro5.chr3 T 333 C 0 s panPan2.chrUn_NW_014024201v1 137757 10 + 190779 CAGGTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127106 10 + 192460366 CAGGTGCCAC i macFas5.chr2 C 0 T 45 s manLeu1.NW_012102020v1 660461 10 - 1977891 CAGGTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524183 10 + 7796314 CAGGTGCCAC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613263 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=14510.000000 s hg38.chr3_KI270779v1_alt 194156 26 + 205312 ATCCTCCTGCTCAGCCCGGCCTCCGC s panTro5.chr3 200181143 26 + 202621043 ATCCTCCTGCCCAGCCTGGCCTCCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137767 26 + 190779 ATCCTCCTGCCCAGCCTGGCCTCCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127071 22 + 192460366 ATCCTCCCACCCGGCCCGGCCT---- i macFas5.chr2 T 45 C 0 s manLeu1.NW_012102020v1 660471 12 - 1977891 ATCCTCCCGCCT-------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524193 22 + 7796314 GTCCTCCCGCCTGACGCGGCct---- i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613263 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 338 - 189199 T a score=31038.000000 s hg38.chr3_KI270779v1_alt 194182 13 + 205312 CCTTCTCCTTACG s panTro5.chr3 200181169 13 + 202621043 CCTTCTCCTTACG i panTro5.chr3 C 0 T 179 s panPan2.chrUn_NW_014024201v1 137793 13 + 190779 CCTTCTCCTTACG i panPan2.chrUn_NW_014024201v1 C 0 T 179 s gorGor5.CYUI01000254v1 28219 13 - 189199 ccttctccttACA i gorGor5.CYUI01000254v1 T 338 C 0 s macFas5.chr2 127093 13 + 192460366 CCTTCGCCTTACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613263 13 + 19675229 CCTTCTCCTTACG i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660483 13 - 1977891 CATTCTCCTTACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524215 13 + 7796314 ccttctccttacg i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=5210.000000 s hg38.chr3_KI270779v1_alt 194195 4 + 205312 CAGA s gorGor5.CYUI01000254v1 28232 4 - 189199 CAGG i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 127106 4 + 192460366 CAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613276 4 + 19675229 CAGG i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660496 4 - 1977891 CAGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524228 4 + 7796314 cagg i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137806 179 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181182 179 + 202621043 T a score=16296.000000 s hg38.chr3_KI270779v1_alt 194199 6 + 205312 TGCCAC s panTro5.chr3 200181003 6 + 202621043 tgccac i panTro5.chr3 T 179 C 0 s panPan2.chrUn_NW_014024201v1 137627 6 + 190779 tgccac i panPan2.chrUn_NW_014024201v1 T 179 C 0 s gorGor5.CYUI01000254v1 28236 6 - 189199 TGCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 127110 6 + 192460366 TGCCAC i macFas5.chr2 C 0 T 90 s macNem1.NW_012014355v1 613280 6 + 19675229 TGCCAC i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660500 6 - 1977891 TGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524232 6 + 7796314 tgccac i colAng1.NW_012118932v1 C 0 T 200 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=39888.000000 s hg38.chr3_KI270779v1_alt 194205 22 + 205312 ATCCTCCTGCCCGGCCCGGCCT s panTro5.chr3 200181009 22 + 202621043 atcctcctgcccggcccggcct i panTro5.chr3 C 0 I 151 s panPan2.chrUn_NW_014024201v1 137633 22 + 190779 atcctcctgcccggcccggcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28242 22 - 189199 ATCCTCCTGCCCGGCCCGGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 127026 22 + 192460366 ATCCTCCTGCCTGGCCCAGCCT i macFas5.chr2 T 90 C 0 s macNem1.NW_012014355v1 613286 22 + 19675229 ATCCTCCCACCCGGCCCGGCCT i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660506 22 - 1977891 GTCCTCCCACCCGGCCCAGCCT i manLeu1.NW_012102020v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=14665.000000 s hg38.chr3_KI270779v1_alt 194227 11 + 205312 CCTTCTCCTTA s panPan2.chrUn_NW_014024201v1 137655 11 + 190779 ccttctccttA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28264 11 - 189199 CCTTCTCCTTA i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 127048 11 + 192460366 CCTTCTCCTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613308 11 + 19675229 CCTTCGCCTTA i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660528 11 - 1977891 CCTTCTCCTTA i manLeu1.NW_012102020v1 C 0 T 272 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181031 151 + 202621043 I a score=-3451.000000 s hg38.chr3_KI270779v1_alt 194238 2 + 205312 --C-C s panPan2.chrUn_NW_014024201v1 137666 3 + 190779 --CGC i panPan2.chrUn_NW_014024201v1 C 0 I 137 s gorGor5.CYUI01000254v1 28275 2 - 189199 --CA- i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 127059 3 + 192460366 CGC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613319 3 + 19675229 CGC-- i macNem1.NW_012014355v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181031 151 + 202621043 I a score=13095.000000 s hg38.chr3_KI270779v1_alt 194240 9 + 205312 AGGTGCCAC s panTro5.chr3 200181182 9 + 202621043 AGGTGCCAC i panTro5.chr3 I 151 C 0 s panPan2.chrUn_NW_014024201v1 137806 9 + 190779 AGGTGCCAC i panPan2.chrUn_NW_014024201v1 I 137 C 0 s gorGor5.CYUI01000254v1 28277 9 - 189199 AGGTGCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 127062 9 + 192460366 AGGTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613322 9 + 19675229 AGGTGCCAC i macNem1.NW_012014355v1 C 0 T 100 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=910.000000 s hg38.chr3_KI270779v1_alt 194249 1 + 205312 A s panTro5.chr3 200181191 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137815 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28286 1 - 189199 A i gorGor5.CYUI01000254v1 C 0 T 55 s macFas5.chr2 127071 1 + 192460366 A i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=9344.000000 s hg38.chr3_KI270779v1_alt 194250 20 + 205312 TCCTCC-GCCCAGCCTGGCCT s panTro5.chr3 200181192 21 + 202621043 TCCTCCTGCCCAGCCTGGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137816 21 + 190779 TCCTCCTGCCCAGCCTGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127072 21 + 192460366 TCCTCCCACCCGGCCCGGCCT i macFas5.chr2 C 0 T 135 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=1200.000000 s hg38.chr3_KI270779v1_alt 194270 4 + 205312 CCGC s panTro5.chr3 200181213 4 + 202621043 CCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137837 4 + 190779 CCGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 127093 135 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=1200.000000 s hg38.chr3_KI270779v1_alt 194274 2 + 205312 CC s panTro5.chr3 200181217 2 + 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137841 2 + 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 126958 2 + 192460366 CC i macFas5.chr2 T 135 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=21189.000000 s hg38.chr3_KI270779v1_alt 194276 42 + 205312 TTCTCCTTAC-CAGGTGCCACATCCTCCTGCTCAGCCTGGCCT s panTro5.chr3 200181219 42 + 202621043 TTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137747 42 + 190779 TTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 126960 43 + 192460366 TTCTCCTTACGCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 T 254 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=4941.000000 s hg38.chr3_KI270779v1_alt 194318 19 + 205312 CCGCCCTTCTCCTTACAAG s panTro5.chr3 200181261 19 + 202621043 CCGCCCTTCTCCTTACCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137789 19 + 190779 CCGCCCTTCTCCTTACGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 127003 254 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=14521.000000 s hg38.chr3_KI270779v1_alt 194337 35 + 205312 GTGCCACATCCTCCTGCTCAGCCTGGCCTCCGCCG s panTro5.chr3 200181280 35 + 202621043 GTGCCACATCCTCCTGCTCAGCCTGGCCTCTGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137808 35 + 190779 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCC i panPan2.chrUn_NW_014024201v1 C 0 T 96 s macFas5.chr2 126749 31 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCC---- i macFas5.chr2 T 254 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=22782.000000 s hg38.chr3_KI270779v1_alt 194372 44 + 205312 TTCTCCTTA-CCAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCC s panTro5.chr3 200181315 44 + 202621043 TTCTCCTTA-CCAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137747 44 + 190779 TTCTCCTTA-CCAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCC i panPan2.chrUn_NW_014024201v1 T 96 C 0 s macFas5.chr2 126780 45 + 192460366 TTCTCCTTACCCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCC i macFas5.chr2 C 0 I 223 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=600.000000 s hg38.chr3_KI270779v1_alt 194416 2 + 205312 GC s panTro5.chr3 200181359 2 + 202621043 GC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137791 2 + 190779 GC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126825 223 + 192460366 I e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=22755.000000 s hg38.chr3_KI270779v1_alt 194418 44 + 205312 CCTTCTCCTTACG-AGGTGCCACATCCTCCTGCCCAGCCTGGCCT s panTro5.chr3 200181361 44 + 202621043 CCTTCTCCTTACG-AGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137793 44 + 190779 CCTTCTCCTTACG-AGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 127048 45 + 192460366 CCTTCTCCTTACGCAGGTGCCACATCCTCCCACCCGGCCCGGCCT i macFas5.chr2 I 223 T 344 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=1800.000000 s hg38.chr3_KI270779v1_alt 194462 6 + 205312 CCGCCC s panTro5.chr3 200181405 6 + 202621043 CCGCCC i panTro5.chr3 C 0 T 96 s panPan2.chrUn_NW_014024201v1 137837 6 + 190779 CCGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 127093 344 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=3261.000000 s hg38.chr3_KI270779v1_alt 194468 13 + 205312 TTCTCCTTACGAG s panTro5.chr3 200181315 13 + 202621043 TTCTCCTTACCAG i panTro5.chr3 T 96 C 0 s panPan2.chrUn_NW_014024201v1 137843 13 + 190779 TTCTCCTTACCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 127093 344 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=20346.000000 s hg38.chr3_KI270779v1_alt 194481 48 + 205312 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTACCAG- s panTro5.chr3 200181328 48 + 202621043 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTACGAG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137856 48 + 190779 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTACCAG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 126749 45 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCTTACCCAG i macFas5.chr2 T 344 T 45 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=600.000000 s hg38.chr3_KI270779v1_alt 194529 1 + 205312 G s panTro5.chr3 200181376 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137904 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 T 48 s macFas5.chr2 126749 1 + 192460366 G i macFas5.chr2 T 45 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=14484.000000 s hg38.chr3_KI270779v1_alt 194530 32 + 205312 TGCCACATCCTCCTGCTCAGCCTGGCCTCCGC s panTro5.chr3 200181377 32 + 202621043 TGCCACATCCTCCTGCCCAGCCTGGCCTCCGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137857 32 + 190779 TGCCACATCCTCCTGCCCAGCCTGGCCTCCGC i panPan2.chrUn_NW_014024201v1 T 48 C 0 s macFas5.chr2 126750 30 + 192460366 TGCTACGTCCTCCCGCCCGGCCCGGCCTCC-- i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e chlSab2.chr15 476324 113 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=10420.000000 s hg38.chr3_KI270779v1_alt 194562 12 + 205312 CCTTCTCCTTAC s panTro5.chr3 200181409 12 + 202621043 CCTTCTCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137889 12 + 190779 CCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 126780 10 + 192460366 --TTCTCCTTAC i macFas5.chr2 C 0 I 1 s chlSab2.chr15 476211 12 - 91754291 ccttctccttAC i chlSab2.chr15 T 113 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613331 100 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=5210.000000 s hg38.chr3_KI270779v1_alt 194574 4 + 205312 CAGG s panTro5.chr3 200181421 4 + 202621043 CAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137901 4 + 190779 CAGG i panPan2.chrUn_NW_014024201v1 C 0 T 48 s macFas5.chr2 126791 4 + 192460366 CAGG i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 613231 4 + 19675229 TAGG i macNem1.NW_012014355v1 T 100 C 0 s chlSab2.chr15 476224 4 - 91754291 CAGG i chlSab2.chr15 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=9485.000000 s hg38.chr3_KI270779v1_alt 194578 7 + 205312 TGCCACA s panTro5.chr3 200181425 7 + 202621043 TGCCACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137857 7 + 190779 TGCCACA i panPan2.chrUn_NW_014024201v1 T 48 C 0 s macFas5.chr2 126795 7 + 192460366 TGCCACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613235 7 + 19675229 TGCCACA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476228 7 - 91754291 TGCCACA i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660539 272 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=41200.000000 s hg38.chr3_KI270779v1_alt 194585 23 + 205312 TCCTCCTGCCCGGCCCGGCCTCC s panTro5.chr3 200181432 23 + 202621043 tcctcctgcccagcccggcctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137864 23 + 190779 TCCTCCTGCCCAGCCTGGCCTCC i panPan2.chrUn_NW_014024201v1 C 0 T 261 s macFas5.chr2 126802 23 + 192460366 TCCTCCCGCCCGGCCCGGCCTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613242 23 + 19675229 TCCTCCTGCCTGGCCCAGCCTCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476235 23 - 91754291 TCCGCCCGCCCGGCCCGGCCTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660267 23 - 1977891 tcctcccgcccggcccggcctcc i manLeu1.NW_012102020v1 T 272 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=26432.000000 s hg38.chr3_KI270779v1_alt 194608 21 + 205312 TTCTCCTTACGCAGGTGCCAC s panTro5.chr3 200181455 21 + 202621043 ttctccttaagcaggtgccac i panTro5.chr3 C 0 T 152 s macFas5.chr2 126825 21 + 192460366 TTCTCCCTACACAGGTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613265 21 + 19675229 TTCTCCTTACGCAGGTGCCAC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476258 21 - 91754291 TTCTCCCTACGCAGGTGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660290 21 - 1977891 ttctccctacacaggtgccat i manLeu1.NW_012102020v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=6165.000000 s hg38.chr3_KI270779v1_alt 194629 11 + 205312 ATCCTCCTGCC s macFas5.chr2 126846 11 + 192460366 GTCCTCCCGCC i macFas5.chr2 C 0 T 108 s macNem1.NW_012014355v1 613286 11 + 19675229 ATCCTCCCACC i macNem1.NW_012014355v1 C 0 I 5 s chlSab2.chr15 476279 11 - 91754291 ATCCTCCCGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660311 8 - 1977891 atcCTCCC--- i manLeu1.NW_012102020v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T e panTro5.chr3 200181476 152 + 202621043 T a score=1516.000000 s hg38.chr3_KI270779v1_alt 194640 6 + 205312 CG-----GCCT s macNem1.NW_012014355v1 613302 6 + 19675229 CG-----GCCT i macNem1.NW_012014355v1 I 5 C 0 s chlSab2.chr15 476290 11 - 91754291 CGGCCTGGCct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660319 4 - 1977891 -------GCCT i manLeu1.NW_012102020v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126857 108 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T e panTro5.chr3 200181476 152 + 202621043 T a score=9152.000000 s hg38.chr3_KI270779v1_alt 194646 11 + 205312 CCTTCTCCTTA s macNem1.NW_012014355v1 613308 11 + 19675229 CCTTCGCCTTA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476301 11 - 91754291 ccttctcctta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660323 11 - 1977891 CCTTCTCCTTA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524038 11 + 7796314 CCTCCTCCTTA i colAng1.NW_012118932v1 T 200 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126857 108 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T e panTro5.chr3 200181476 152 + 202621043 T a score=1500.000000 s hg38.chr3_KI270779v1_alt 194657 1 + 205312 C s panTro5.chr3 200181324 1 + 202621043 C i panTro5.chr3 T 152 C 0 s macNem1.NW_012014355v1 613319 1 + 19675229 C i macNem1.NW_012014355v1 C 0 I 1 s chlSab2.chr15 476312 1 - 91754291 c i chlSab2.chr15 C 0 I 1 s manLeu1.NW_012102020v1 660334 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 524049 1 + 7796314 C i colAng1.NW_012118932v1 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126857 108 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28287 55 - 189199 T a score=6111.000000 s hg38.chr3_KI270779v1_alt 194658 3 + 205312 CAG s panTro5.chr3 200181325 3 + 202621043 CAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28232 3 - 189199 CAG i gorGor5.CYUI01000254v1 T 55 C 0 s macNem1.NW_012014355v1 613321 3 + 19675229 CAG i macNem1.NW_012014355v1 I 1 T 180 s chlSab2.chr15 476314 3 - 91754291 cag i chlSab2.chr15 I 1 C 0 s manLeu1.NW_012102020v1 660336 3 - 1977891 CAG i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 524051 3 + 7796314 CAG i colAng1.NW_012118932v1 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126857 108 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=16598.000000 s hg38.chr3_KI270779v1_alt 194661 7 + 205312 GTGCCAC s panTro5.chr3 200181328 7 + 202621043 GTGCCAC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28235 7 - 189199 GTGCCAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126749 7 + 192460366 GTGCTAC i macFas5.chr2 T 108 C 0 s macNem1.NW_012014355v1 613144 7 + 19675229 GTGCTAC i macNem1.NW_012014355v1 T 180 C 0 s chlSab2.chr15 476317 7 - 91754291 gtgccac i chlSab2.chr15 C 0 T 122 s manLeu1.NW_012102020v1 660339 7 - 1977891 GTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524054 7 + 7796314 GTGCCAT i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=38731.000000 s hg38.chr3_KI270779v1_alt 194668 22 + 205312 ATCCTCCTGCCCAGCCCGGCCT s panTro5.chr3 200181335 22 + 202621043 ATCCTCCTGCCCAGCCTGGCCT i panTro5.chr3 C 0 I 4 s gorGor5.CYUI01000254v1 28242 22 - 189199 ATCCTCCTGCCCGGCCCGGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126756 22 + 192460366 GTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613151 22 + 19675229 GTCCTCCCGCCCGGCCCGGCCT i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660346 22 - 1977891 GTCCTCCCACCCGGCCCAGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524061 22 + 7796314 GTCCTCCTGCCCGGCCCGGCCT i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=21630.000000 s hg38.chr3_KI270779v1_alt 194690 15 + 205312 CCTTCTCCTTACCAG s panTro5.chr3 200181361 15 + 202621043 CCTTCTCCTTACGAG i panTro5.chr3 I 4 C 0 s gorGor5.CYUI01000254v1 28264 15 - 189199 CCTTCTCCTTACAAG i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126778 15 + 192460366 CCTTCTCCTTACCCA i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 613173 15 + 19675229 CCTTCTCCTTATGCA i macNem1.NW_012014355v1 C 0 T 44 s manLeu1.NW_012102020v1 660368 15 - 1977891 CCTTCTCCCTACACA i manLeu1.NW_012102020v1 C 0 I 1 s colAng1.NW_012118932v1 524083 15 + 7796314 CCTTCTCCTTACACA i colAng1.NW_012118932v1 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 261 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=78714.000000 s hg38.chr3_KI270779v1_alt 194705 41 + 205312 GTGCCACATCCTCCTGCCCAGCCC----GGCCT----CCTTCTCCTTAC s panTro5.chr3 200181376 45 + 202621043 GTGCCACATCCTCCTGCCCAGCCT----GGCCTCCGCCCTTCTCCTTAC i panTro5.chr3 C 0 T 378 s panPan2.chrUn_NW_014024201v1 137626 41 + 190779 gtgccacatcctcctgcccggccc----ggcct----ccttctccttAC i panPan2.chrUn_NW_014024201v1 T 261 C 0 s gorGor5.CYUI01000254v1 28279 45 - 189199 GTGCCACATCCTCCTGCCCGGCCCCCCAGCCCT----CCTTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126794 41 + 192460366 GTGCCACGTCCTCCCGCCCGGCCC----GGCCT----CCTTCTCCCTAC i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 613144 41 + 19675229 GTGCTACGTCCTCCCGCCCGGCCC----GGCCT----CCTTCTCCTTAT i macNem1.NW_012014355v1 T 44 C 0 s manLeu1.NW_012102020v1 660384 31 - 1977891 GTGCCACATCCTCCC--------------GCCT----CCTTCTCCTTAC i manLeu1.NW_012102020v1 I 1 C 0 s colAng1.NW_012118932v1 524099 41 + 7796314 GTGCCACGTCCTCCTGCCCAGCCC----GGCCT----CCTTCTCCTTAA i colAng1.NW_012118932v1 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=131053.000000 s hg38.chr3_KI270779v1_alt 194746 64 + 205312 GCAGGTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTACACAGATG-CCACATCCT-CCT s panTro5.chr3 200181043 64 + 202621043 GCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACACAGGTG-CCACATCCT-CCT i panTro5.chr3 T 378 C 0 s panPan2.chrUn_NW_014024201v1 137667 64 + 190779 GCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACACAGGTG-CCACATCCT-CCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28324 62 - 189199 -CAGGTGCCACATCCTCCTGCCC-GCCCGGCCTCC-TCTCCTTAC-CAGGTGCCCACATcctccct i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126835 64 + 192460366 ACAGGTGCCACGTCCTCCCGCCTGGCCCGGCCTCCTTCTCCTTACGCAGGTG-CCACGTCCT-CCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613185 64 + 19675229 GCAAGTGCCACGTCCTCCCACCCGGCCCGGCCTCCTTCTCCTTACATAGGTG-CCACATCCT-CCT i macNem1.NW_012014355v1 C 0 C 0 s manLeu1.NW_012102020v1 660415 64 - 1977891 GCAGGTGCCACGTCCTCCTGCCCGGCCTGGTCTCCTTCTCCCTACACAGGTG-CCACATCCT-CCC i manLeu1.NW_012102020v1 C 0 T 77 s colAng1.NW_012118932v1 524140 61 + 7796314 ACAGGTGCCACGTCCACCTGCCCGGCCTGGCCTC---CTCCTTACACAGGTG-CCACGTCCT-CCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=21460.000000 s hg38.chr3_KI270779v1_alt 194810 13 + 205312 GCCCGGCCCGGCC s panTro5.chr3 200181107 13 + 202621043 GCCCAGCCCGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137731 13 + 190779 GCCCAGCCCGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28386 13 - 189199 gcccagcccggcc i gorGor5.CYUI01000254v1 C 0 T 167 s macFas5.chr2 126899 13 + 192460366 GCCCGGCCCGGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613249 13 + 19675229 GCCTGGCCCAGCC i macNem1.NW_012014355v1 C 0 C 0 s colAng1.NW_012118932v1 524201 13 + 7796314 GCCTGACGCGGCc i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=17945.000000 s hg38.chr3_KI270779v1_alt 194823 13 + 205312 TCCTTCTCCTTAC s panTro5.chr3 200181120 13 + 202621043 TCCTTCTCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137744 13 + 190779 TCCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 126912 13 + 192460366 TCCTTCTCCCTAC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 613262 13 + 19675229 TCCTTCTCCTTAC i macNem1.NW_012014355v1 C 0 I 1 s colAng1.NW_012118932v1 524214 13 + 7796314 tccttctccttac i colAng1.NW_012118932v1 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28399 167 - 189199 T a score=20433.000000 s hg38.chr3_KI270779v1_alt 194836 10 + 205312 CAGGTGCCAC s panTro5.chr3 200181133 10 + 202621043 CAGGTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137757 10 + 190779 CAGGTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28232 10 - 189199 CAGGTGCCAC i gorGor5.CYUI01000254v1 T 167 C 0 s macFas5.chr2 126926 10 + 192460366 CAGGTGCCAC i macFas5.chr2 I 1 C 0 s macNem1.NW_012014355v1 613276 10 + 19675229 CAGGTGCCAC i macNem1.NW_012014355v1 I 1 C 0 s colAng1.NW_012118932v1 524228 10 + 7796314 caggtgccac i colAng1.NW_012118932v1 I 1 T 200 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=27324.000000 s hg38.chr3_KI270779v1_alt 194846 22 + 205312 ATCCTTCTGCCCGGCCCGGCCT s panTro5.chr3 200181143 22 + 202621043 ATCCTCCTGCCCAGCCTGGCCT i panTro5.chr3 C 0 T 44 s panPan2.chrUn_NW_014024201v1 137767 22 + 190779 ATCCTCCTGCCCAGCCTGGCCT i panPan2.chrUn_NW_014024201v1 C 0 T 44 s gorGor5.CYUI01000254v1 28242 22 - 189199 ATCCTCCTGCCCGGCCCGGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126936 22 + 192460366 GTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613286 22 + 19675229 ATCCTCCCACCCGGCCCGGCCT i macNem1.NW_012014355v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=16165.000000 s hg38.chr3_KI270779v1_alt 194868 12 + 205312 CCTTCTCCTTAC s panTro5.chr3 200181121 12 + 202621043 CCTTCTCCTTAC i panTro5.chr3 T 44 C 0 s panPan2.chrUn_NW_014024201v1 137745 12 + 190779 CCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 T 44 C 0 s gorGor5.CYUI01000254v1 28264 12 - 189199 CCTTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126958 12 + 192460366 CCTTCTCCTTAC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 613308 12 + 19675229 CCTTCGCCTTAC i macNem1.NW_012014355v1 C 0 T 134 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=15050.000000 s hg38.chr3_KI270779v1_alt 194880 18 + 205312 CGGGTGCCACATCCTCCT s panTro5.chr3 200181133 18 + 202621043 CAGGTGCCACATCCTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137757 18 + 190779 CAGGTGCCACATCCTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28276 18 - 189199 AAGGTGCCACATCCTCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126971 18 + 192460366 CAGGTGCCACGTCCTCCC i macFas5.chr2 I 1 T 240 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476324 122 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=6727.000000 s hg38.chr3_KI270779v1_alt 194898 9 + 205312 GCCCGGCCT s panTro5.chr3 200181151 9 + 202621043 GCCCAGCCT i panTro5.chr3 C 0 T 116 s panPan2.chrUn_NW_014024201v1 137775 9 + 190779 GCCCAGCCT i panPan2.chrUn_NW_014024201v1 C 0 T 116 s gorGor5.CYUI01000254v1 28294 9 - 189199 GCCCGGCCC i gorGor5.CYUI01000254v1 C 0 I 9 s chlSab2.chr15 476202 9 - 91754291 gcccgccct i chlSab2.chr15 T 122 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126989 240 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=3438.000000 s hg38.chr3_KI270779v1_alt 194907 12 + 205312 CCTTCTCCTTAC s gorGor5.CYUI01000254v1 28312 12 - 189199 CCTTCTCCTTAC i gorGor5.CYUI01000254v1 I 9 C 0 s chlSab2.chr15 476211 12 - 91754291 ccttctccttAC i chlSab2.chr15 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137784 116 + 190779 T e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126989 240 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181160 116 + 202621043 T a score=2910.000000 s hg38.chr3_KI270779v1_alt 194919 3 + 205312 CAG s panTro5.chr3 200181044 3 + 202621043 CAG i panTro5.chr3 T 116 C 0 s panPan2.chrUn_NW_014024201v1 137668 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 T 116 C 0 s gorGor5.CYUI01000254v1 28324 3 - 189199 CAG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 476224 3 - 91754291 CAG i chlSab2.chr15 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126989 240 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=46612.000000 s hg38.chr3_KI270779v1_alt 194922 42 + 205312 GTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTATG s panTro5.chr3 200181047 42 + 202621043 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACA i panTro5.chr3 C 0 I 332 s panPan2.chrUn_NW_014024201v1 137671 42 + 190779 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28327 39 - 189199 GTGCCACATCCTCCTGCCC-GCCCGGCCTCC-TCTCCTTAC- i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126749 42 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTACC i macFas5.chr2 T 240 C 0 s chlSab2.chr15 476227 42 - 91754291 GTGCCACATCCGCCCGCCCGGCCCGGCCTCCTTCTCCCTACG i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=20430.000000 s hg38.chr3_KI270779v1_alt 194964 16 + 205312 CAGGTG-CCACATCCTC s panTro5.chr3 200181421 16 + 202621043 CAGGTG-CCACAtcctc i panTro5.chr3 I 332 C 0 s panPan2.chrUn_NW_014024201v1 137713 16 + 190779 CAGGTG-CCACATCCTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28366 17 - 189199 CAGGTGCCCACATcctc i gorGor5.CYUI01000254v1 C 0 I 67 s macFas5.chr2 126791 16 + 192460366 CAGGTG-CCACGTCCTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476269 16 - 91754291 CAGGTG-CCACATCCTC i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=1187.000000 s hg38.chr3_KI270779v1_alt 194980 2 + 205312 CT s panTro5.chr3 200181437 2 + 202621043 ct i panTro5.chr3 C 0 T 395 s panPan2.chrUn_NW_014024201v1 137729 2 + 190779 CT i panPan2.chrUn_NW_014024201v1 C 0 T 18 s macFas5.chr2 126807 2 + 192460366 CC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476285 2 - 91754291 CC i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28383 67 - 189199 I a score=1500.000000 s hg38.chr3_KI270779v1_alt 194982 5 + 205312 GCCCG s macFas5.chr2 126809 5 + 192460366 GCCCG i macFas5.chr2 C 0 T 65 s chlSab2.chr15 476287 5 - 91754291 GCCCG i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137731 18 + 190779 T e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28383 67 - 189199 I e panTro5.chr3 200181439 395 + 202621043 T a score=391.000000 s hg38.chr3_KI270779v1_alt 194987 4 + 205312 GCCT s chlSab2.chr15 476292 4 - 91754291 GCCT i chlSab2.chr15 C 0 T 72 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137731 18 + 190779 T e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524238 200 + 7796314 T e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126814 65 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28383 67 - 189199 I e panTro5.chr3 200181439 395 + 202621043 T a score=2950.000000 s hg38.chr3_KI270779v1_alt 194991 12 + 205312 CCTTCTCCTTAC s gorGor5.CYUI01000254v1 28450 12 - 189199 CCCTCTCCTTAC i gorGor5.CYUI01000254v1 I 67 C 0 s colAng1.NW_012118932v1 524038 12 + 7796314 CCTCCTCCTTAC i colAng1.NW_012118932v1 T 200 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137731 18 + 190779 T e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476296 72 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126814 65 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181439 395 + 202621043 T a score=1382.000000 s hg38.chr3_KI270779v1_alt 195003 3 + 205312 CAG s panTro5.chr3 200181044 3 + 202621043 CAG i panTro5.chr3 T 395 C 0 s panPan2.chrUn_NW_014024201v1 137713 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 T 18 C 0 s gorGor5.CYUI01000254v1 28462 1 - 189199 --A i gorGor5.CYUI01000254v1 C 0 C 0 s colAng1.NW_012118932v1 524051 3 + 7796314 CAG i colAng1.NW_012118932v1 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476296 72 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e macFas5.chr2 126814 65 + 192460366 T e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=49891.000000 s hg38.chr3_KI270779v1_alt 195006 41 + 205312 GTACCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC s panTro5.chr3 200181047 41 + 202621043 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC i panTro5.chr3 C 0 I 1 s panPan2.chrUn_NW_014024201v1 137716 41 + 190779 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 T 131 s gorGor5.CYUI01000254v1 28463 39 - 189199 GTGCC-CATCC-CCTGCCCAGCCCGGCCTCCTTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126749 41 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTAC i macFas5.chr2 T 65 I 1 s colAng1.NW_012118932v1 524054 41 + 7796314 GTGCCATGTCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAC i colAng1.NW_012118932v1 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 134 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e chlSab2.chr15 476296 72 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=5325.000000 s hg38.chr3_KI270779v1_alt 195047 3 + 205312 CAG s panTro5.chr3 200181089 3 + 202621043 CAG i panTro5.chr3 I 1 T 90 s gorGor5.CYUI01000254v1 28502 3 - 189199 CAG i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126791 3 + 192460366 CAG i macFas5.chr2 I 1 T 45 s macNem1.NW_012014355v1 613186 3 + 19675229 CAA i macNem1.NW_012014355v1 T 134 C 0 s chlSab2.chr15 476224 3 - 91754291 CAG i chlSab2.chr15 T 72 C 0 s colAng1.NW_012118932v1 524096 3 + 7796314 CAG i colAng1.NW_012118932v1 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137757 131 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=68021.000000 s hg38.chr3_KI270779v1_alt 195050 28 + 205312 GTGCCACATCCTCCTGCCCAGCCCGGCC s panTro5.chr3 200181002 28 + 202621043 gtgccacatcctcctgcccggcccggcc i panTro5.chr3 T 90 C 0 s panPan2.chrUn_NW_014024201v1 137626 28 + 190779 gtgccacatcctcctgcccggcccggcc i panPan2.chrUn_NW_014024201v1 T 131 C 0 s gorGor5.CYUI01000254v1 28505 28 - 189199 GTGCCACAtcctcctgcccagcccggcc i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126749 28 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCC i macFas5.chr2 T 45 C 0 s macNem1.NW_012014355v1 613189 28 + 19675229 GTGCCACGTCCTCCCACCCGGCCCGGCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476227 28 - 91754291 GTGCCACATCCGCCCGCCCGGCCCGGCC i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 524099 28 + 7796314 GTGCCACGTCCTCCTGCCCAGCCCGGCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660479 77 - 1977891 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=50220.000000 s hg38.chr3_KI270779v1_alt 195078 17 + 205312 TCCTTCTCCTTACGCAG s panTro5.chr3 200181030 17 + 202621043 tccttctccttACGCAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137654 17 + 190779 tccttctccttACGCAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28533 17 - 189199 tccttctccttaagcag i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126777 17 + 192460366 TCCTTCTCCTTACCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613217 17 + 19675229 TCCTTCTCCTTACATAG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476255 17 - 91754291 TCCTTCTCCCTACGCAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660402 17 - 1977891 TCCTTCTCCTTACGCAG i manLeu1.NW_012102020v1 T 77 C 0 s colAng1.NW_012118932v1 524127 17 + 7796314 TCCTTCTCCTTAAACAG i colAng1.NW_012118932v1 C 0 T 132 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=24552.000000 s hg38.chr3_KI270779v1_alt 195095 7 + 205312 GTGCCAC s panTro5.chr3 200181047 7 + 202621043 GTGCCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137671 7 + 190779 GTGCCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28550 7 - 189199 gtgccac i gorGor5.CYUI01000254v1 C 0 T 348 s macFas5.chr2 126794 7 + 192460366 GTGCCAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613234 7 + 19675229 GTGCCAC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476272 7 - 91754291 GTGCCAC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660419 7 - 1977891 GTGCCAC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524012 7 + 7796314 GTGCCAC i colAng1.NW_012118932v1 T 132 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=27405.000000 s hg38.chr3_KI270779v1_alt 195102 12 + 205312 ATCCTCCTGCCC s panTro5.chr3 200181054 12 + 202621043 ATCCTCCTGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137678 12 + 190779 ATCCTCCTGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 126801 12 + 192460366 GTCCTCCCGCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613241 12 + 19675229 ATCCTCCTGCCT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476279 12 - 91754291 ATCCTCCCGCCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660426 12 - 1977891 GTCCTCCTGCCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524019 12 + 7796314 GTCCTCCCGCCT i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28557 348 - 189199 T a score=33231.000000 s hg38.chr3_KI270779v1_alt 195114 12 + 205312 GGCCTGGCCTCC s panTro5.chr3 200181066 12 + 202621043 AGCCCGGCCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137690 12 + 190779 AGCCCGGCCTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28209 12 - 189199 gcccgggcctcc i gorGor5.CYUI01000254v1 T 348 C 0 s macFas5.chr2 126813 12 + 192460366 GGCCCGGCCTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613253 12 + 19675229 GGCCCAGCCTCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476291 12 - 91754291 GGCCTGGCctcc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660438 12 - 1977891 GGCCTGGTCTCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524031 12 + 7796314 GGCCTGGCCTCC i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=24724.000000 s hg38.chr3_KI270779v1_alt 195126 11 + 205312 TTCTCCTTACA s panTro5.chr3 200181078 11 + 202621043 TTCTCCTTACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137702 11 + 190779 TTCTCCTTACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28221 11 - 189199 ttctccttACA i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126825 11 + 192460366 TTCTCCCTACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613265 11 + 19675229 TTCTCCTTACG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476303 11 - 91754291 ttctccttaca i chlSab2.chr15 C 0 T 132 s colAng1.NW_012118932v1 524043 8 + 7796314 ---TCCTTACA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=80617.000000 s hg38.chr3_KI270779v1_alt 195137 44 + 205312 CAGATGCCACTTCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAC s panTro5.chr3 200181089 44 + 202621043 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137713 44 + 190779 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28232 44 - 189199 CAGGTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126836 44 + 192460366 CAGGTGCCACGTCCTCCCGCCTGGCCCGGCCTCCTTCTCCTTAC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 613276 44 + 19675229 CAGGTGCCACATCCTCCCACCCGGCCCGGCCTCCTTCGCCTTAC i macNem1.NW_012014355v1 C 0 T 176 s colAng1.NW_012118932v1 524051 44 + 7796314 CAGGTGCCATGTCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAC i colAng1.NW_012118932v1 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=37738.000000 s hg38.chr3_KI270779v1_alt 195181 32 + 205312 AAGGTGCCACATCCTCCTGCCCAGCCC----GGCCT s panTro5.chr3 200181133 32 + 202621043 CAGGTGCCACATCCTCCTGCCCAGCCT----GGCCT i panTro5.chr3 C 0 I 52 s panPan2.chrUn_NW_014024201v1 137757 32 + 190779 CAGGTGCCACATCCTCCTGCCCAGCCT----GGCCT i panPan2.chrUn_NW_014024201v1 C 0 I 52 s gorGor5.CYUI01000254v1 28276 36 - 189199 AAGGTGCCACATCCTCCTGCCCGGCCCCCCAGCCCT i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126881 32 + 192460366 CAGGTGCCACGTCCTCCCGCCCGGCCC----GGCCT i macFas5.chr2 I 1 C 0 s colAng1.NW_012118932v1 524096 32 + 7796314 CAGGTGCCACGTCCTCCTGCCCAGCCC----GGCCT i colAng1.NW_012118932v1 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 176 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=13715.000000 s hg38.chr3_KI270779v1_alt 195213 10 + 205312 CCTTCTCCTT s panTro5.chr3 200181217 10 + 202621043 CCTTCTCCTT i panTro5.chr3 I 52 C 0 s panPan2.chrUn_NW_014024201v1 137841 10 + 190779 CCTTCTCCTT i panPan2.chrUn_NW_014024201v1 I 52 C 0 s gorGor5.CYUI01000254v1 28312 10 - 189199 CCTTCTCCTT i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126913 10 + 192460366 CCTTCTCCCT i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 524128 10 + 7796314 CCTTCTCCTT i colAng1.NW_012118932v1 C 0 I 3 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 176 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=3100.000000 s hg38.chr3_KI270779v1_alt 195223 5 + 205312 AC-CAG s panTro5.chr3 200181227 5 + 202621043 AC-CAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137851 5 + 190779 AC-CAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28322 5 - 189199 AC-CAG i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126923 6 + 192460366 ACGCAG i macFas5.chr2 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613320 176 + 19675229 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524138 3 + 7796314 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=25101.000000 s hg38.chr3_KI270779v1_alt 195228 19 + 205312 GTGCCACATCCTCCTGCCC s panTro5.chr3 200181232 19 + 202621043 GTGCCACATCCTCCTGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137856 19 + 190779 GTGCCACATCCTCCTGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28327 19 - 189199 GTGCCACATCCTCCTGCCC i gorGor5.CYUI01000254v1 C 0 I 57 s macFas5.chr2 126929 19 + 192460366 GTGCCACGTCCTCCCGCCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613144 19 + 19675229 GTGCTACGTCCTCCCGCCC i macNem1.NW_012014355v1 T 176 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524138 3 + 7796314 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=7796.000000 s hg38.chr3_KI270779v1_alt 195247 10 + 205312 GGCCCAGCCT s panTro5.chr3 200181251 10 + 202621043 AGCCTGGCCT i panTro5.chr3 C 0 T 217 s panPan2.chrUn_NW_014024201v1 137875 10 + 190779 AGCCTGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s macFas5.chr2 126948 10 + 192460366 GGCCCGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613163 10 + 19675229 GGCCCGGCCT i macNem1.NW_012014355v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524138 3 + 7796314 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e gorGor5.CYUI01000254v1 28346 57 - 189199 I a score=2000.000000 s hg38.chr3_KI270779v1_alt 195257 2 + 205312 CC s panPan2.chrUn_NW_014024201v1 137885 2 + 190779 CC i panPan2.chrUn_NW_014024201v1 C 0 T 219 s gorGor5.CYUI01000254v1 28403 2 - 189199 cc i gorGor5.CYUI01000254v1 I 57 C 0 s macFas5.chr2 126958 2 + 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613173 2 + 19675229 CC i macNem1.NW_012014355v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524138 3 + 7796314 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181261 217 + 202621043 T a score=2740.000000 s hg38.chr3_KI270779v1_alt 195259 10 + 205312 TTCT---------TCTTAC s gorGor5.CYUI01000254v1 28405 19 - 189199 tTCTCCATCCCTTTCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126960 10 + 192460366 TTCT---------CCTTAC i macFas5.chr2 C 0 T 179 s macNem1.NW_012014355v1 613175 10 + 19675229 TTCT---------CCTTAT i macNem1.NW_012014355v1 C 0 I 1 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137887 219 + 190779 T e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524138 3 + 7796314 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro5.chr3 200181261 217 + 202621043 T a score=5325.000000 s hg38.chr3_KI270779v1_alt 195269 3 + 205312 CAG s panTro5.chr3 200181044 3 + 202621043 CAG i panTro5.chr3 T 217 C 0 s panPan2.chrUn_NW_014024201v1 137668 3 + 190779 CAG i panPan2.chrUn_NW_014024201v1 T 219 C 0 s gorGor5.CYUI01000254v1 28424 3 - 189199 CAG i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126791 3 + 192460366 CAG i macFas5.chr2 T 179 C 0 s macNem1.NW_012014355v1 613186 3 + 19675229 CAA i macNem1.NW_012014355v1 I 1 C 0 s colAng1.NW_012118932v1 524141 3 + 7796314 CAG i colAng1.NW_012118932v1 I 3 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e chlSab2.chr15 476314 132 - 91754291 T e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=60681.000000 s hg38.chr3_KI270779v1_alt 195272 31 + 205312 GTGCCACATCCTCCTGCCCGGCCCGGCCTCG s panTro5.chr3 200181047 31 + 202621043 GTGCCACATCCTCCTGCCCAGCCCGGCCTCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137671 31 + 190779 GTGCCACATCCTCCTGCCCAGCCCGGCCTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28427 25 - 189199 GTGCCACATCCTCCTGCCCAGCC------CC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126794 31 + 192460366 GTGCCACGTCCTCCCGCCCGGCCCGGCCTCC i macFas5.chr2 C 0 I 45 s macNem1.NW_012014355v1 613189 31 + 19675229 GTGCCACGTCCTCCCACCCGGCCCGGCCTCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476182 31 - 91754291 gtgccgcgtcctcccgcccggcccgccctcc i chlSab2.chr15 T 132 C 0 s colAng1.NW_012118932v1 524144 30 + 7796314 GTGCCACGTCCACCTGCCCGGCCTGGCCTC- i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660450 0 - 1977891 C e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=108360.000000 s hg38.chr3_KI270779v1_alt 195303 45 + 205312 TTCTCCTTACACAGGTGCCACATCCTCCTGCCCGGCCCGGCCTCC s panTro5.chr3 200181078 45 + 202621043 TTCTCCTTACACAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCC i panTro5.chr3 C 0 I 288 s panPan2.chrUn_NW_014024201v1 137702 45 + 190779 TTCTCCTTACACAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28452 40 - 189199 CTCTCCTTACA---GTGCC-CATCC-CCTGCCCAGCCCGGCCTCC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126870 45 + 192460366 TTCTCCTTACGCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCC i macFas5.chr2 I 45 C 0 s macNem1.NW_012014355v1 613220 45 + 19675229 TTCTCCTTACATAGGTGCCACATCCTCCTGCCTGGCCCAGCCTCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 476213 45 - 91754291 ttctccttACGCAGGTGCCACATCCGCCCGCCCGGCCCGGCCTCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660450 35 - 1977891 TTCTCCCTACACAGGTGCCACATCCTCCC----------GCCTCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524174 43 + 7796314 --CTCCTTACACAGGTGCCACGTCCTCCCGCCTGACGCGGCctcc i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=32357.000000 s hg38.chr3_KI270779v1_alt 195348 10 + 205312 TTCTCCTTAC s panTro5.chr3 200181411 10 + 202621043 TTCTCCTTAC i panTro5.chr3 I 288 C 0 s panPan2.chrUn_NW_014024201v1 137747 10 + 190779 TTCTCCTTAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28492 10 - 189199 TTCTCCTTAC i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126915 10 + 192460366 TTCTCCCTAC i macFas5.chr2 C 0 I 1 s macNem1.NW_012014355v1 613265 10 + 19675229 TTCTCCTTAC i macNem1.NW_012014355v1 C 0 I 45 s chlSab2.chr15 476258 10 - 91754291 TTCTCCCTAC i chlSab2.chr15 C 0 I 46 s manLeu1.NW_012102020v1 660485 10 - 1977891 TTCTCCTTAC i manLeu1.NW_012102020v1 C 0 I 46 s colAng1.NW_012118932v1 524217 10 + 7796314 ttctccttac i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=26292.000000 s hg38.chr3_KI270779v1_alt 195358 29 + 205312 CAGGTGCCACAtcctcctgcccagcccgg s panTro5.chr3 200181421 29 + 202621043 CAGGTGCCACAtcctcctgcccagcccgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137757 29 + 190779 CAGGTGCCACATCCTCCTGCCCAGCCTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28502 29 - 189199 CAGGTGCCACAtcctcctgcccagcccgg i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126926 29 + 192460366 CAGGTGCCACGTCCTCCCGCCCGGCCCGG i macFas5.chr2 I 1 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e dasNov3.JH569502 3951376 0 + 6579706 C e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613275 45 + 19675229 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524227 0 + 7796314 C e manLeu1.NW_012102020v1 660495 46 - 1977891 I e chlSab2.chr15 476268 46 - 91754291 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=6295.000000 s hg38.chr3_KI270779v1_alt 195387 5 + 205312 cctcc s panTro5.chr3 200181450 5 + 202621043 cctcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137786 5 + 190779 CCTCC i panPan2.chrUn_NW_014024201v1 C 0 I 1681 s gorGor5.CYUI01000254v1 28531 5 - 189199 cctcc i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126955 5 + 192460366 CCTCC i macFas5.chr2 C 0 C 0 s dasNov3.JH569502 3951376 5 + 6579706 cctac i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613275 45 + 19675229 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524227 0 + 7796314 C e manLeu1.NW_012102020v1 660495 46 - 1977891 I e chlSab2.chr15 476268 46 - 91754291 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=4195.000000 s hg38.chr3_KI270779v1_alt 195392 10 + 205312 -ttctccttaa s panTro5.chr3 200181455 10 + 202621043 -ttctccttaa i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28536 10 - 189199 -ttctccttaa i gorGor5.CYUI01000254v1 C 0 C 0 s macFas5.chr2 126960 10 + 192460366 -TTCTCCTTAC i macFas5.chr2 C 0 I 135 s dasNov3.JH569502 3951381 10 + 6579706 cctttctttc- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137791 1681 + 190779 I e macNem1.NW_012014355v1 613275 45 + 19675229 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e colAng1.NW_012118932v1 524227 0 + 7796314 C e manLeu1.NW_012102020v1 660495 46 - 1977891 I e chlSab2.chr15 476268 46 - 91754291 I e cerAty1.NW_012004056v1 545442 0 + 16847902 C e rheMac8.chr2 202521805 0 + 204787373 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=2552.000000 s hg38.chr3_KI270779v1_alt 195402 1 + 205312 g s panTro5.chr3 200181465 1 + 202621043 g i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28546 1 - 189199 g i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202521805 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127105 1 + 192460366 G i macFas5.chr2 I 135 C 0 s macNem1.NW_012014355v1 613320 1 + 19675229 G i macNem1.NW_012014355v1 I 45 C 0 s cerAty1.NW_012004056v1 545442 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 524227 1 + 7796314 g i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3951391 1 + 6579706 a i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137791 1681 + 190779 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660495 46 - 1977891 I e chlSab2.chr15 476268 46 - 91754291 I e nomLeu3.chr11 120946760 0 + 123690457 C a score=1051073.000000 s hg38.chr3_KI270779v1_alt 195403 208 + 205312 caggtgccactcccctatag----ccttcacattccttccaccaactc-agcatttgcttctgggaggacccgacCCGAGACACTCACGTAAAAGAGGATGCCCA-CGTACAGATGTGGCAGCAGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaatctttcctcct-CTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG s panTro5.chr3 200181466 208 + 202621043 caggtgccactcccctatag----ccttcacattccttccaccaactc-agcatttgcttctgggaggacccgacctgagacaCTCACGTAAAAGAGGATGCCCA-CGTACAGATGTGGAAGCAGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaatctttcctcct-CTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28547 208 - 189199 caggtgccactcccctatag----ccttcacattccttccaccaactc-agcatttgcttctgggaggacccgacCCGAGACACTCACGTAAAAGAGGATGCCCA-CGTACAGATGTGGAAGCAGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctttcctcct-CTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946760 208 + 123690457 caggtgccactcccctatag----ccttcacattccttccaccagctc-agcatttgcttctgggaggacccgacCCGAGACACTCACATAAAAGAGGATGCCCA-TTTACAGACGTGGAAGCTGGCCCTCCTagctgggattcagacccaggtcagctcgactccaaaacctgtcctcct-CTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202521806 211 + 204787373 CAGGTGCCACTCCCCTATAGCCTCCCTCCACATTCCTTCCACCAGCTC-AGCATTTGCTTCCAGGAGGACCTGACCCGAGACACTCACTTAAAACAGGATGCCCG-TGTACAGATGTGGAAGCTGGTCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgtcctcct--cgcagctctgtattccacgGTTCAGCAGGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127106 212 + 192460366 CAGGTGCCACTCCCCTATAGCCTCCCTCCACATTCCTTCCACCAGCTC-AGCATTTGCTTCCAGGAGGACCTGACCCGAGACACTCACTTAAAACAGGATGCCCG-TGTACAGATGTGGAAGCTGGTCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgtcctcct-ccGCAGCTCTGTATTCCACGGTTCAGCAGGGAG i macFas5.chr2 C 0 I 3 s macNem1.NW_012014355v1 613321 212 + 19675229 CAGGTGCCACTCCCCTATAGCCTCCCTCCACATTCCTTCCACCATCTC-AGCATTTGCTTCCAGGAGGACCTGACCCGAGATACTCACTTAAAACAGGATGCCCG-TGTACAGATGTGGAAGCTGGGCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgtcctcct-ccGCAGCTCTGTATTCCACGGTTCAGCAGGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545443 212 + 16847902 CAGGTGCCACTCCCCTATAGCCTCCCTCCACACTCCTTCCACCAGCTC-AGCATTTGCTTCCAGGAGGACCCGACCCGAGACACTCACTTAAAACAGGATGCCCG-TGTACAGATGTGGAAGCTGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgtcctcct-ccacagctctgtattCCACGGTTCAGCAGGGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476314 211 - 91754291 caggtgccactcccctatagcctccctccacattccttccaccagctc-agcgtttgcttccaggaggaccAGACCCGAGACACTCACTTAAAACAGGA-GCCCG-GGTACAGATGTGGAAGCTGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctatcctcct-ccGCAGCTCTGTATTCCACGGTTCAGCAGGGAG i chlSab2.chr15 I 46 C 0 s manLeu1.NW_012102020v1 660541 212 - 1977891 CAGGTGCCACTCCCCTATAGCCTCCCTCCACATTCCTTCCACCAGCTC-AGCATTTGCTTCCAGGAGGACCCGACCCGAGACACTCACTTAAAACAGGATGCCTG-TGTACAGATGTGGAAGCTGGCCCTCCgagctgggattcagacccaggtcagcatgactccaaaacctgtcctcct-cccCAGCTCTGTATTCCACGGTTCAGCAGGGAG i manLeu1.NW_012102020v1 I 46 C 0 s colAng1.NW_012118932v1 524228 208 + 7796314 caggtgccactcccttatag----cctccacattccttccaccggctc-agcatttgcttccgggaggacccgacCCGAGACACTCGCTTAAAACAGGATGCCCG-TGTACAGATGTGGGAGCTGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgctctcct-ccgcagctctgtattCCACAGTTCAGTAGGGAG i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3951392 208 + 6579706 cagttgttactctcctatag---atcttttcattcccaactccatcttgggtgtttgcttcta----gacccaTCCTGAGTCATTCACTTAAAAGCTGATAACCATTTTATAGATAAAAAAACTGACCCTCCAagctgggatttagatctagatctgcacacctccaaagcctgtcctttttccactgcaccacacCTGACAATGCAGCAGAGAG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137791 1681 + 190779 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=13880.000000 s hg38.chr3_KI270779v1_alt 195611 3 + 205312 GCG s panTro5.chr3 200181674 3 + 202621043 GCG i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 28755 3 - 189199 GCG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946968 3 + 123690457 GCG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522017 3 + 204787373 GCG i rheMac8.chr2 C 0 C 0 s macNem1.NW_012014355v1 613533 3 + 19675229 GCG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545655 3 + 16847902 GCG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476525 3 - 91754291 GCG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660753 3 - 1977891 GCG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524436 3 + 7796314 GCG i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3951600 3 + 6579706 GTA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137791 1681 + 190779 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e macFas5.chr2 127318 3 + 192460366 I a score=93235.000000 s hg38.chr3_KI270779v1_alt 195614 19 + 205312 GGCGGG-CTG-GAGGCCCCGG s panTro5.chr3 200181677 19 + 202621043 GGCGGG-CTG-GAGGCCCCGG i panTro5.chr3 C 0 I 211 s gorGor5.CYUI01000254v1 28758 19 - 189199 GGCGGG-CTG-GAGGCCCCGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946971 20 + 123690457 CGTGGG-CTGTGGGGCCCCTG i nomLeu3.chr11 C 0 I 1 s rheMac8.chr2 202522020 19 + 204787373 GGTGGG-CTG-GGGGCCCCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127321 19 + 192460366 GGTGGG-CTG-GGGGCCCCGG i macFas5.chr2 I 3 C 0 s macNem1.NW_012014355v1 613536 19 + 19675229 GGTGGG-CTG-GGGGCCCCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545658 19 + 16847902 GGTGGG-CTG-GGGGCCCCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476528 19 - 91754291 GGTGGG-CTG-GGGCCCCCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660756 19 - 1977891 GGTGGG-CTG-GGGGCCCCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524439 19 + 7796314 GGTGGG-CTG-GGGGCCCTGG i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3951603 20 + 6579706 CGTGGGCCTG-GGGGGCTCGG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137791 1681 + 190779 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=6600.000000 s hg38.chr3_KI270779v1_alt 195633 1 + 205312 C s panTro5.chr3 200181907 1 + 202621043 C i panTro5.chr3 I 211 C 0 s gorGor5.CYUI01000254v1 28777 1 - 189199 C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946992 1 + 123690457 C i nomLeu3.chr11 I 1 C 0 s rheMac8.chr2 202522039 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127340 1 + 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613555 1 + 19675229 C i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545677 1 + 16847902 C i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476547 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660775 1 - 1977891 C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524458 1 + 7796314 C i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3951623 1 + 6579706 C i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e panPan2.chrUn_NW_014024201v1 137791 1681 + 190779 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=141818.000000 s hg38.chr3_KI270779v1_alt 195634 27 + 205312 -ACCTGCTGTATGTGGTCTCTATCCGAG------------------------- s panTro5.chr3 200181908 27 + 202621043 -ACCTGCTGTATGTGGTCTCTATCCGAG------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139472 27 + 190779 -ACCTGCTGTATGTGGTCTCTATTTGAG------------------------- i panPan2.chrUn_NW_014024201v1 I 1681 C 0 s gorGor5.CYUI01000254v1 28778 27 - 189199 -ACCTGCTGTATGTGGTCTCTATCCGAG------------------------- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120946993 27 + 123690457 -ACCTGCTGTATGTGGTCCCTATCCGAG------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522040 27 + 204787373 -ACCTGCTGTGTGTGGTCCCTATCGGAG------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127341 27 + 192460366 -ACCTGCTGTGTGTGGTCCCTATCCGAG------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613556 27 + 19675229 -ACCTGCTGTGTGTGGTCCCTATCCGAG------------------------- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545678 27 + 16847902 -ACCTGCTGTGTGTGGTCCCTATCCGAG------------------------- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476548 24 - 91754291 -ACCTGCTGTGTGTGGTCCCTATCC---------------------------- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660776 24 - 1977891 -ACCTGCTGTGTGTGGTCCCTATCC---------------------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524459 27 + 7796314 -ACCTGCTGTGTGTGGTCCCTATCCGAG------------------------- i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3951624 53 + 6579706 AGCCTGCTAGGCGTGGTCCCTGCCTGCAAGAAGCACGTATTCTGCTTAGGAAG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 479630 259 - 608964 I e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=20015.000000 s hg38.chr3_KI270779v1_alt 195661 11 + 205312 --------GCCATGGTGAA-- s panTro5.chr3 200181935 11 + 202621043 --------GCCATGGTGAA-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139499 11 + 190779 --------GCCATGGCGAA-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28805 11 - 189199 --------GCCATGGCGAA-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947020 11 + 123690457 --------GCCATGGCGAA-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522067 11 + 204787373 --------GCCACGATGAA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127368 11 + 192460366 --------GCCACGACGAA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613583 7 + 19675229 --------GCCATGA------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545705 7 + 16847902 --------GCCACGA------ i cerAty1.NW_012004056v1 C 0 C 0 s colAng1.NW_012118932v1 524486 11 + 7796314 --------GCCACAGTGAA-- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 479889 11 - 608964 --------GCCAAGGAGAG-- i otoGar3.GL873829 I 259 C 0 s dasNov3.JH569502 3951677 21 + 6579706 ACCAGGCCCCCAGGCTGCAAA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e aotNan1.NW_018507959v1 37997 224 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660800 0 - 1977891 C e chlSab2.chr15 476572 0 - 91754291 C a score=14178.000000 s hg38.chr3_KI270779v1_alt 195672 7 + 205312 ---AGCAGGG-- s panTro5.chr3 200181946 7 + 202621043 ---AGCAGGG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139510 7 + 190779 ---AGCAGGG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28816 7 - 189199 ---AGCAGGG-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947031 7 + 123690457 ---AGCAGGT-- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522078 7 + 204787373 ---AGCAGGG-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127379 7 + 192460366 ---AGCAGGG-- i macFas5.chr2 C 0 T 68 s colAng1.NW_012118932v1 524497 7 + 7796314 ---AACAGGG-- i colAng1.NW_012118932v1 C 0 T 70 s aotNan1.NW_018507959v1 38221 7 - 3732694 ---AGCAAGG-- i aotNan1.NW_018507959v1 I 224 C 0 s otoGar3.GL873829 479900 5 - 608964 ---AGCCG---- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3951698 12 + 6579706 AGGTGCAGACCG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613590 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660800 0 - 1977891 C e chlSab2.chr15 476572 0 - 91754291 C e cerAty1.NW_012004056v1 545712 0 + 16847902 C a score=5828.000000 s hg38.chr3_KI270779v1_alt 195679 2 + 205312 AG s panTro5.chr3 200181953 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139517 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28823 2 - 189199 AG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947038 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s colAng1.NW_012118932v1 524434 2 + 7796314 AG i colAng1.NW_012118932v1 T 70 C 0 s aotNan1.NW_018507959v1 38228 2 - 3732694 AG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479905 2 - 608964 AG i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3951710 2 + 6579706 AA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613590 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660800 0 - 1977891 C e chlSab2.chr15 476572 0 - 91754291 C e cerAty1.NW_012004056v1 545712 0 + 16847902 C e macFas5.chr2 127386 68 + 192460366 T e rheMac8.chr2 202522085 0 + 204787373 C a score=27052.000000 s hg38.chr3_KI270779v1_alt 195681 35 + 205312 GTGGGTGGGCTG-------------------------------------------------------------------------GGGGCCC--------------------AGCACCTGCTGTATGT-------------------------------------------------------- s panTro5.chr3 200181955 36 + 202621043 GTGGGTGGGCTG-------------------------------------------------------------------------GGGGCCC-------------------GGGCACCTGCTGTATGT-------------------------------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139519 36 + 190779 GCGGGAGGGCTG-------------------------------------------------------------------------GGGGACC-------------------GGGCACCTGCTGTGTGT-------------------------------------------------------- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28825 36 - 189199 GTGGGTGGGCTG-------------------------------------------------------------------------GGGGGCC-------------------GGGCACCTGCTGTATGT-------------------------------------------------------- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947040 109 + 123690457 GCGGGCGGGCTGTGGGGCCCCTGGTACCTGCTGTATGTGGTCCCTATCCGAGGCCATGGCGAAAGCAGGTAGGCGGGCGGGCTGTGGGGCCC-------------------CGGCACCTGCTGTATGT-------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 127318 36 + 192460366 GCGGGTGGGCTG-------------------------------------------------------------------------GGGGCCC-------------------CGGCACCTGCTGTGTGT-------------------------------------------------------- i macFas5.chr2 T 68 C 0 s colAng1.NW_012118932v1 524436 36 + 7796314 GCGGGTGGGCTG-------------------------------------------------------------------------GGGGCCC-------------------TGGCACCTGCTGTGTGT-------------------------------------------------------- i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38230 35 - 3732694 GCGGGTGGGCT--------------------------------------------------------------------------GGGACCC-------------------CGGCACCCACTGTGCGT-------------------------------------------------------- i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479907 32 - 608964 GTGACAAAG----------------------------------------------------------------------------GGAAGCC-------------------CCATTCCTGAGGTG-GT-------------------------------------------------------- i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3951712 110 + 6579706 GTGATGACGCTG-------------------------------------------------------------------------GAGACCCAGAGGCTGGATCTCCCAACAGGTGCTTGTTG-GTGTTGGTGCCACTGAAGAGGAGGAAGTCAAGGAAGAATCCCCTTACCCCCCACTTTTGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613590 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660800 0 - 1977891 C e chlSab2.chr15 476572 0 - 91754291 C e cerAty1.NW_012004056v1 545712 0 + 16847902 C e rheMac8.chr2 202522085 0 + 204787373 C a score=12643.000000 s hg38.chr3_KI270779v1_alt 195716 3 + 205312 GGC s panTro5.chr3 200181991 3 + 202621043 GGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139555 3 + 190779 GGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28861 3 - 189199 GGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947149 3 + 123690457 GGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 127354 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s colAng1.NW_012118932v1 524472 3 + 7796314 GGT i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38265 3 - 3732694 GGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479939 3 - 608964 GGC i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29116128 3 + 31377067 GGC i canFam3.chr33 I 98 C 0 s dasNov3.JH569502 3951822 3 + 6579706 GGC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613590 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e manLeu1.NW_012102020v1 660800 0 - 1977891 C e chlSab2.chr15 476572 0 - 91754291 C e cerAty1.NW_012004056v1 545712 0 + 16847902 C e rheMac8.chr2 202522085 0 + 204787373 C a score=31160.000000 s hg38.chr3_KI270779v1_alt 195719 17 + 205312 ------CTCTAT--------CTGAGGCCATG s panTro5.chr3 200181994 17 + 202621043 ------CTCTAT--------CTGAGGCCATG i panTro5.chr3 C 0 I 70 s panPan2.chrUn_NW_014024201v1 139558 17 + 190779 ------CTCTAT--------CCTAGGCCACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 28864 17 - 189199 ------CTCTAT--------CCGAGGCCATG i gorGor5.CYUI01000254v1 C 0 I 279 s nomLeu3.chr11 120947152 17 + 123690457 ------CTCTAT--------CCGAGGCCACG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 127357 17 + 192460366 ------CCCTAT--------CCGAGGCCACG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476572 9 - 91754291 ----------------------GAGGCCACG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660800 9 - 1977891 ----------------------GAGGCCACG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524475 17 + 7796314 ------CCCTAT--------CCGAGGCCACA i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38268 17 - 3732694 ------CTCTGT--------CCGAGGCCATG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479942 12 - 608964 ------CCCT-------------AGGCCACA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65475843 18 - 98207768 ------CTCTGT-------CCCAAGTCCACG i mm10.chr16 I 1552 C 0 s canFam3.chr33 29116131 18 + 31377067 ------CTCGGC-------TCCCAGACCCCG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3951825 31 + 6579706 CTCATCCCCCAGAAGGAGCCCCCAGGCTGTG i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 480355 31 - 6778120 I e macNem1.NW_012014355v1 613590 0 + 19675229 C e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 545712 0 + 16847902 C e rheMac8.chr2 202522085 0 + 204787373 C a score=702525.000000 s hg38.chr3_KI270779v1_alt 195736 86 + 205312 GCGAAAGCAGGGGCCCTGGTA-CTAGGGTCACAC----AAAGGCCACTGTCATTCTCTTGGGATTCGGTTTCT-----CCTTTCCCTAAAAGTGCC s panTro5.chr3 200182081 86 + 202621043 GCGAAAGCAGGGGCCCTAGTA-CTAGGGTCACAC----AAAGGCCACTGTCATTCTCTTGGGATTCGGTTTCT-----CCTTTCCCTAAAAGTGCC i panTro5.chr3 I 70 C 0 s panPan2.chrUn_NW_014024201v1 139575 86 + 190779 GCGAAAGCAGGGGCCCTAGTA-CTAGGGTCACAC----AAAGGCCACTGTCATTCTCTTGGGATTCGGTTTCT-----CCTTTCCCTAAAAGTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29160 86 - 189199 GCGAAAGCAGGGGCCCTGGTA-CTAGGGTCACAC----AAAGGCCACTGTCATTCTCTTGGGATTCAGTTTCT-----CCTTTCCCTAAAAGTGCC i gorGor5.CYUI01000254v1 I 279 C 0 s nomLeu3.chr11 120947169 86 + 123690457 GAGAAAGCAGGGGCCCTGGTG-CTAGGGCCACAC----AAAGGCCACTGTCGTTCTCTTGGGATTCAGTTGCT-----CCTTTCTCTAAAAGTGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522085 77 + 204787373 ------------GCCCTGGTA-CTAGGGCCACAC-AAAAAGAGCCAGTGTCATTCTCTTGGGTTTGAGTTTCT-----CCATTCTCTAAAAGTGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127374 89 + 192460366 ACGAAAGCAGGGGCCCTGGTA-CTAGGGCCACAC-AAAAAGAGCCAGTGTCATTCTCTTGGGTTTGAGTTTCT-----CCATTCTCTAAAAGTGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613590 88 + 19675229 -CGAAAGCAGGGGCCCTGGTA-CTAGGGCCACAC-AAAAAGAGCCAGTGTCATTCTCTTGGGTTTGAGTTTCT-----CCATTCTCTAAAAGTGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545712 89 + 16847902 -CGAAAGCAGGGGCCCTGGTA-CTAGGGCCACACAAAAAAAAGCCAGTGTCATTCTCTTGGGTTTAGGTTTCT-----CCTTTCTCTAAAAGTGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476581 89 - 91754291 ATGAAAGCAGGGGCCCTGGTA-CTAGGGCCACAC-AACAAAAGCCAGAGTCATTCTCTTGGGTTTGGGTTTCT-----CCTTTCTCTAAAAGTGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660809 90 - 1977891 ACGAAAGCAGGGGCCCTGGTA-CTAGGGCCACACAAAAAAAAGCCAGTGTCATTCTCTTGGGTTTGAGTTTCT-----CCATTCTCTAAAAGTGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524492 86 + 7796314 GTGAAAACAGGGGCCCTGGTA-CTAGGGCCACAC----AAAAGCCAGTGTCGTTCTCTTGGGATTGGGTTTCT-----CCTTTCTCTGAAAGTGCC i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38285 86 - 3732694 GTGAACGCAGGGGCCCTGGTG-CTCCGGCCACAC----AGAGGCCACTGCCATTCTTTTGGGACTGGGTTTCT-----CCTTTCTCTAAAGGTGCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 479954 92 - 608964 GTGAAGGCAGGGGCCCTGGTGTTTTTGGCCACAC----AAAGGCCACTGTCATTCTCCCAGGATTGGGTTTCTCAGCCCCTTTCTCTAAAAGCCTT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65475861 82 - 98207768 GAGAAGGCG-----TTTGGCA-TTTGGGCCGCAC----AAAG---ACAGTCCTCCTCCCAGGATTGAGTTTCTCAGCCCCTTTCTCTGAA-GTGCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29116149 91 + 31377067 GGGAAAGTGGGGGCCCTGGCG-TTTGGGCCACAT----AAAGGCCCCCATCATTCTTCCAAGATGGGGTTTCTCAGCCCACGTCTTTAAAAGTGCC i canFam3.chr33 C 0 I 103 s dasNov3.JH569502 3951856 90 + 6579706 GGGAAGACTGGGGCCCTGGCC-TTTGGGTCACAC----AAAAGCC-CTGTCTTTCTCCCAGGATTGGGTTTCTCAGCCCCTTTCTCTCAAAGTGCC i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=1244790.000000 s hg38.chr3_KI270779v1_alt 195822 176 + 205312 AAGCATTCTCACGCCAATTAGCTCATTTCCTGTCTCATCTCACCTC-TGTGGTGGAGCAGGGCATGATTTTTACGCATGCAACGTCTTCTTA--CGGGCATCCCTGTGAAGCA-GGGCCACCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGTCCAGGGATCTAAACTCA-------------TTCCATTCA-------------CCCAGCC s panTro5.chr3 200182167 176 + 202621043 AAGCATTCTCACGCCAATTAGCTCATTTCCTGTCTCATCTCACCTC-TGTGGTGGAGCAGGGCATGATTTCTACGCACGCAACGTCTTCTTA--CGGGCATCCCCGTGAAGCA-GGGCCACCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGTCCAGGGATCTCAACTCA-------------TTCCATTCA-------------CCCAGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139661 176 + 190779 AAGCATTCTCACGCCAATTAGCTCATTTCCTGTCTCATCTCACCTC-TGTGGTGGAGCAGGGCATGATTTCTACGCACCCAAGGTCTTCTTA--CGGGCATCCCCGTGAAGCA-GGGCCACCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGTCCAGGGATCTCAACTCA-------------TTCCATTCA-------------CCCAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29246 175 - 189199 AAGCATTCTCATGCCGATTAGCTCATTTCCTGTCTCATCTCACCTC-TGTGGTGGAGCAGGGCATGATTTCCACGCACGCAACGTCTTCTTA--CGGGCATCCCCGTGAAGCA-GGGCCA-CCCGGG-GCACAGAAGG---------------------------------------GCCTG------------------GAGGTCCAGGGATCTAAACTCA-------------TTCCATTCA-------------CCCAGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947255 175 + 123690457 AAGCGTTCTCACACCGATGAGCTCATTTCCCATCTCATCTCACCTC-TGT-GTGGAGCGGGACATGATGCCTACGCATGCAACGTCTTCTTA--CGGGCATCCCCGTGAAGCA-GGGCCACCCCAGG-GCACAGGAGG---------------------------------------GCCTA------------------GAGGTCCAGGGATCTAAACTCA-------------TTCCATTCA-------------CCCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522162 175 + 204787373 AAGCATTCTCACGCCAATTAGCTCATGTCCCGTCTCATCTTACCTC-TGTGGTGGAGTGGGACACGATGCCTACACACACAACGTCTTCTTG--AGGGCGTCCCCGTGAAGCA-GGGCC-TCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGCCCAGGGATCTAAACCCA-------------TTCCATCCA-------------CCCAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127463 175 + 192460366 AAGCATTCTCACGCCAATTAGCTCATGTCCCATCTCATCTTACCTC-TGTGGTGGAGTGGGACACGATGCCTACACACACAACGTCTTCTTG--AGGGCGTCCCCGTGAAGCA-GGGCC-TCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGCCCAGGGATCTAAACCCA-------------TTCCATCCA-------------CCCAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613678 175 + 19675229 AAGCATTCTCACGCCAATTAGCTCATGTCCCGTCTCATCTTACCTC-TGTGGTGGAGTGGGACACGATGCCTATACACACAACGTCTTCTTG--AGGGCGTCCCCGTGAAGCA-GGGCC-TCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGCCCAGGGATCTAAACTCA-------------TTCCATCCA-------------CCCAGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545801 172 + 16847902 AAGCATTCTCACGCCAATTAGCTCATGTCCCGTCTCATTTTACCTC-TGTGGTGGAGTGGGACACGATGCCTACACACACAACGTCTTCTTG--AGGGCATCCCCGTGAAGCA-GGGCC-CCCGGGG-CCACAGGAGG---------------------------------------GCCTG------------------GAGGCCCAGGGATCTCAACCCA-------------TTCCAT----------------CACAAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476670 176 - 91754291 AAGCATTCTCACGCCAATTAGCTCATGTCCCGTCTCATTTTACCTC-TGTGGTGGAGTGGGACATGATGCCTACACACGCCACGTCTTCTTG--AGGGCGTCCCCGTGAAGCA-GGGCCACCCCGGG-GCAGAGGAAG---------------------------------------GCCTG------------------GAGGCCCAGGGATCTAAACCCA-------------TTCCATCCA-------------CCTAGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 660899 175 - 1977891 AAGCATTCTCACGCCAATTAGCTCATGTCCCATCTCATTTTACCTC-TGTGGTGGAGTGGGACACGATGCCTACACACGCAACATCTTCTTG--AGGGCATCCCCGTGAAGCA-GGGCC-CCTGGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGCCCAGGGATCTCAACCCA-------------TTCCATCCA-------------CCCAGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524578 176 + 7796314 AACCATTCTCACGCCAATTAGCTCATGTCCCGTCGCATTTTACCCC-TGGGGTGGAGGGGCACACGATGCCTACACACGCAACGTCTTCTTG--AGGGTATCCCTGTGAAGCA-GGGCCACCCCGGG-GCACAGGAGG---------------------------------------GCCTG------------------GAGGCCCAGGGATCCAAACCCA-------------TTCCATTCA-------------CCCAGGC i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38371 176 - 3732694 AAGCATTTTCTTGCCAATTAGCTCATTTCCCGTCTCATTTTACCTC-TGTGGCAGGGCGGG-CATGATGCCTACGCACGCAACGTCTTCTGGA-AGGGCATCCCCATGAAGTAGGGGCCACCCTGGG-GCACAGGAGC---------------------------------------GCATG------------------GAGGCCCA-GGATCTAAACTCA-------------TCCCATTCA-------------CCCAGCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 480046 198 - 608964 GAATATTTTCACGCCAATTAGCTCATTTCCCTTCTCATGTTACCTCACGCACGCAAAGGGGGCACGATGCCTGCTC-TGCAGTGTCTTCTGGACATGGTGTCTCCATGGAGCAGGGGCCTTCCTGGGTGCACAGGACA---------------------------------------GCATGGATGGGAGGTTTGGGTTTGAGGACCAGGGATCTAAATTCA-------------TTTCATTTC-------------CTTAGCC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65475943 151 - 98207768 AAGCATTTTCTTAGCGATTAGCTCACTTC---TCTTTACCAACATC-TGGG-------------------------------------------CAAGCGTCCCCATGAACCAGGGGCTGCTTTGGGTGCGCAGGAGGCATAG-------------------GAGGC---CAGGGTTGGCTT------------------AAAGCCCAGGAATCTCAAATTG-------------TTCAGTTAG-------------GCCAGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29116343 188 + 31377067 GAGCATCTTCATGCCAATTAGCTCAGTTCCT-TCTCATTTGACTTC-TGAGGCATTGGGGGGCATAATGCTTACCCCAGCAGCATCTTCCTGC-CTGGGGTCTCTGTGAAGGGGAAGCCGCCCTGAGTGTGCAGGCAG---------------------------------------AGATC------------------GAGG---GGAGATACTGACTCAGGGGCCCCCAAGTCTGCATTTA-------------CCCATCC i canFam3.chr33 I 103 I 203 s dasNov3.JH569502 3951946 231 + 6579706 AAGCATTTTAACACCAATTAGCTCATTTCCCTTCTCATGTTACCTC-TGAGA-GAGGGGGGACCTAAAGCCTACCCAAGCAACATCTTCCAGGCATGGGGTCTCTGTGAAGGAGGGGCCATCCTgagtgcagggggggggaagtgggggggagtgggggggaggggcaggcagggTTGGCTT------------------AAGGCCCAGGAGTCTAAATTCA-------------CTCCATTTGTAGGAACTATAATCTCAATT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=819878.000000 s hg38.chr3_KI270779v1_alt 195998 102 + 205312 TTAAGGAGAA-GAAAACCGAGGCCAGGAAGTCAGCA-----------------AGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTTGTGGG---GCT s panTro5.chr3 200182343 102 + 202621043 TTAAGGAGAA-GAAAACCGAGGCCAGGAAGTCAGCA-----------------AGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTTGTGGG---GCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139837 102 + 190779 TTAAGGAGAA-GAAAACCGAGGCCAGGAAGTCAGCA-----------------AGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTTGTGGG---GCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29421 102 - 189199 TTAAGGAGAA-GAAAACCGAGGCCAGGAAGTCAGCA-----------------AGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTTGTGGG---GCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947430 102 + 123690457 TTAAGGAGAA-GAAAACTGAGGCAGGGAAGTCAGCG-----------------AGAGCACGAAGTCGGTGACCCAGCCTCCGGGTCCCTGGGTTGGCCGCCTGTGTCCTTCGGTGGG---GCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522337 102 + 204787373 TTAAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCG-----------------AGAACGTGAAGTCGGTGAGCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGG---GCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127638 102 + 192460366 TTAAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCG-----------------AGAACGTGAAGTCGGTGAGCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGG---GCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613853 102 + 19675229 TTAAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCG-----------------AGAACGTGAAGTCGGTGAGCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGG---GCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 545973 102 + 16847902 CTAAGGAGAA-GAAAG-CCAGGCCAGGAAGTCACCG------------------GAACGTGAAGTCGTTGAGCCAGCA-CCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGGGCAGCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 476846 102 - 91754291 TTAAGGAGAA-GAAAACCAAGGCCAGGAAGTCAGCG-----------------AGAACAGGAAGTTGGTGAGCCAGCATCCAGGTCCCTGGATTTGCCACCTGTGTCCTTTGGTGGG---GCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661074 102 - 1977891 TTAAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCG-----------------AGAACAGGAAGTCGGTGAGCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGG---GCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524754 118 + 7796314 TTCAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCGAGAACACGAAGTCGGTGAGAACGTGAAGTCGGTGAGCCAGCGTCCA-GTCCCCGGATTTGCCACCTGTGTCCTTCGATGGG---GCT i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38547 102 - 3732694 TTAAGGAGAA-GAAGACCAAGGCCAGGAAGTCAGCG-----------------AGCCCATGAAGCCAGTGAGCCAGCATTCAGTTCCCCGAATTTAACACCTGTGCCCTTCGGTGGG---GCT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 480244 102 - 608964 TGAAGGGGAA-GAAAACCAAGGCCAGGAAGTCAGCA-----------------ACAGCACAAAGTCAGAAACTCAGCATCCACGTCCCCAGATTTGCCTCCTCTGCCCTACCATTGA---GCT i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65476094 102 - 98207768 TTAGTCAGAAGGAAGACCTAGGCCAGGAAGTTCACC-----------------GCAACAGCAAGTGGGAAAGAC-GTATCCAAGCCCTCCAACTTACCACCCCCATCCTACTGCTGG---GCT i mm10.chr16 C 0 I 1750 s canFam3.chr33 29116734 102 + 31377067 TTAAAGGGAA-GAAAACCAAGGCCAGGAAGGTAACC-----------------ACAGGGCTAAGTCAAAAACCCAGCTCCTTGGGCCCCAGATTTGCTCTCCGTGTCCTACACTTAG---GTT i canFam3.chr33 I 203 C 0 s dasNov3.JH569502 3952177 91 + 6579706 ---CTAAGAA-GGAAATAAAAGCCAGGAAGTTAGCA-----------------ACAGTTCTAAATTAAAAACCCAGCATCCAGGCCCCAG--------ATCTGTCTCCTATGGCTGG---GCT i dasNov3.JH569502 C 0 C 0 e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=891124.000000 s hg38.chr3_KI270779v1_alt 196100 112 + 205312 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgaccatgtcatccgaagccctcattctaccgtggaggaggtgtgg s panTro5.chr3 200182445 112 + 202621043 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgaccatgtcgtccgaagccctcattctaccgtggaggaggtgtgg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139939 112 + 190779 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgaccatgtcgtccgaagccctcattctactgtggaggaggtgtgg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29523 112 - 189199 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgaccatgtggtccgaagccctcattctaccgtggaggaggtgtgg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947532 112 + 123690457 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacgtaattttaaaactggaagagaccctggtgaccgtgtcgtccgaagtcctcattctaccgcgggggaggtgtgg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522439 112 + 204787373 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgattttaaaactggaagagaccctggtgaccgtgtcgtccaaagtcctcattctactgtgggggaggtgtgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127740 112 + 192460366 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgattttaaaactggaagagaccctggtgaccgtgtcgtccaaagtcctcattctactgtgggggaggtgtgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 613955 112 + 19675229 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgattttaaaactggaagagaccctggtgaccgtgtcgtccaaagtcctcattctactgtgggggaggtgtgg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 546075 108 + 16847902 TCCCTTTGTAAACCTTGAAAgaataagaggatcttaacttgattttaaaactgaaagagacc--ggtgaccgtgtcgtcc-aagtcctcattctactgt-ggggaggtgtgg i cerAty1.NW_012004056v1 C 0 I 883 s chlSab2.chr15 476948 111 - 91754291 TCCCTTTGTAAAGCTTGAAAgaataagaggattttaa-atgattttaaaactggaagagaccctggtgaccatgtcgtccaaagtcctcattctactgtgggggaggtgtgg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661176 112 - 1977891 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgattttaaaactggaagagaccctggtgaccgtgtcgtccaaagtcctcattctactgtgggggaggtgtgc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524872 112 + 7796314 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgatttcaaaactggaagagaccccggtgaccatgtcgtccaaagtcctcattctactgtgggggaggcgtgg i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38649 111 - 3732694 TCCCTTTGTACAGCTTAAAAgaataaaaggatcttaatgtaattt-aaaactgaaagagaccctggtgactgtgtcatccaaagtcctcattctaccatgggggaggtgcag i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 480346 96 - 608964 TCCCTTTGTAAAACTtcaaagaataaaagaatatcaacataattatagaactggaagagaccttggcagtcaggaagtccaaag----------------gaggggctgcaa i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29116836 110 + 31377067 TCTCTCTCTAAATTCTGAAAGACAAAGAGAA-CTCAGCGTCACTttaggactggaagagacctgggcgatcgtgtggt-cacactccccattgtacccgggaggacgtgcag i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3952268 94 + 6579706 TCCCTTTTTAAATCCTAAAAGGAGAAAagaatctcaacataaatttagaactggaagagacctgggcaatcttgtagtcccaa---------ctgcccTGGGt--------- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I a score=723884.000000 s hg38.chr3_KI270779v1_alt 196212 124 + 205312 gcccagagagaagggag-gtccttgttggcgcagccggtgagcggcagggtgtgtcccg-gagcccgggtttccagcgccctctctgtcttgctgccgagcGT-CCACGTC---------------------------------------TGTTCGGTTGTCTTTG s panTro5.chr3 200182557 123 + 202621043 gcccagagagaagggag-gtcctcgctggcgcagccggtgagtggcagg-tgtgtcccg-gagcccgggtttccagcgccctctctgtcttgctgccgagcGT-CCACGTC---------------------------------------TGTTCGGTTGTCTTTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140051 123 + 190779 gcccagagagaagggag-gtcctcgctggcgcagccagtgagcggcagg-tgtgtcccg-gagcccaggtttccggcgccctctctgtcttgctgcggagcGT-CCACGTC---------------------------------------TGTTCGGTTGTCTTTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29635 121 - 189199 gcccagagagaaggggg-gtcctcgttggcgcagccggtgagcggcagg-tgtgtcccg-gagcccgggtttccggcgcc--ctctgtcttgctgccgagcGT-CCACGTC---------------------------------------TGTTCGGTTGTCTTTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947644 123 + 123690457 gcccagagagaagggag-gtcctcgttggcgcagccggtgagcggcagg-tgcgtcccg-gagcccgggtttccggcgccctctctgtcttgctgcCGAGTGT-CCACGTC---------------------------------------CGTTCGGTTGTCTTTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522551 123 + 204787373 gcccagggggaagggag-gccctcgttggcacagccggcgagcggcagg-tgcgtcccg-gagcccgggtttccggcgccttctctgtcttgctgccgagcGT-CCACGTC---------------------------------------CGTTTGGTTGCCTTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127852 123 + 192460366 gcccagggggaagggag-gccctcgttggcacagccggcgagcggcagg-tgcgtcccg-gagcccgggtttccggcgccttctctgtcttgctgccgagcGT-CCACGTC---------------------------------------CGTTTGGTTGCCTTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614067 123 + 19675229 gcccagggggaagggag-gccctcgttggcacagccggcgagcggcagg-tgcgtcccg-gagcccgggtttccggcgccttctctgtcttgctgccgagcGT-CCACGTC---------------------------------------CGTTTGGTTGCCTTTG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477059 123 - 91754291 gcccagggggaagggag-gccctcgttggcacagccggcgagcagcagg-tgcgtcccg-gagcccaggtttccggcgccttctctgtcttgctgccgagcGT-CCACGTC---------------------------------------CGTTTGGTTGCCTTTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661288 121 - 1977891 gcccacagagaagggag-gcccttgttggcacagccggcaaagggcagg-tgcgtccca-gagcccgggtttccGGCGCCT--TCTGTCTTGCTGCCGAGCGT-CCACGTC---------------------------------------TGTTTGGTTGCCTTTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 524984 123 + 7796314 gcccagggggaagggag-gccctcgttggcacagccggcgagcggcagg-tgcgtcccg-gagcccgggtttccggcgccttctctgtcttgctgccgagcGT-CCACGTC---------------------------------------CCTCTGGTTGCCTTTG i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38760 124 - 3732694 gcccagagagaagggag-atcctcgttcttgtggctggcgagcagcggg-tccgtcctg-gagcctgggtctcccggactctctctgccttgctgttgagcGTCCCATGCC---------------------------------------CATTCAGTGGTCTTTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 480442 158 - 608964 gcccatggagaagtggt-gttc-cattcacgcagc---taagtggcaaaacccatcctt-gaacccaggtttccgg-gttctttctgcttcactgcctgccTC-CTATGTTTAATTACGTGCATgctgggactacaggtgcctgccacaatgcctggctatttttg i otoGar3.GL873829 C 0 I 286 s canFam3.chr33 29116946 119 + 31377067 gcccagagggaagggagcatccgagttcacagagtccatgagtggcaCG-TGT-------GGGTCCACGTTTCCCGTGCTCATTTGGCTTTGCTCTCCGGCCTCCCACGTT---------------------------------------TATCCGGTTGTTCTGG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3952362 109 + 6579706 gccc---------tgag-gtc-------acacagctgatgaggggcaga-cccaggccgtgaacccaggtctccagggctctctctgctttgcttcacggcctcCCAGGCT---------------------------------------TCATAAGGTGGCCCTG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=290382.000000 s hg38.chr3_KI270779v1_alt 196336 53 + 205312 CACACTCCTGGC--TCCCAG---TTAGACCGCTGCTCCCAG-GCGGAACGTCTGC-CACA s panTro5.chr3 200182680 53 + 202621043 CACGCTCCTGGC--TCCCAG---TTACACCGCTGCTCCCAG-GCGGAATGTCTGC-CACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140174 53 + 190779 CACGCTCCTGGC--TCCCAG---TTACACCGCTGCTCCCAG-GCGGAACGTCTGC-CACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29756 53 - 189199 CACACTCCTGGC--TCCCAG---TTAGACCGCTGCTCCCAG-GCGGAACGTCTGC-CACG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947767 53 + 123690457 CACACTCCTGGC--TCCCAG---TTAGACCGCTGCTCCCAG-GCGGAACCTCTGC-CACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522674 53 + 204787373 CACACTCCTGGC--TCCCGG---TGAGACCACTGATCCCAG-GCTGAACCTCTGC-CGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 127975 53 + 192460366 CACACTCCTGGC--TCCCGG---TGAGACCACTGATCCCAG-GCTGAACCTCTGC-CGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614190 53 + 19675229 CACACTCCTGGC--TCCCGG---TAGGACCACTGATCCCAG-GCTGAACCTCTGC-CGCA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477182 53 - 91754291 CACACTCCTGGC--TGCCGG---TGAGAGCGCTGATCCCAG-GCTGAACCTCTGC-CGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661409 53 - 1977891 CACACTCCTGGC--TCCCGG---TGAGACCGCTGATCCCAG-GCTGAGCCTCTGC-CGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525107 53 + 7796314 CACACTCCTGGC--TCCCAG---TGAGATCGCTGATCCCAG-GCTGAACCTCTGC-CACA i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38884 53 - 3732694 CACGCTCCTGGC--ACCCAG---TTAGACCGCAGCTCCCAG-GCTGAACCTCTGC-TACA i aotNan1.NW_018507959v1 C 0 I 9 s canFam3.chr33 29117065 57 + 31377067 CACATTCCTGGC--ACCCCGACCAGAGACC-TTGCCCCTAGTGCCAACCCCGTGCTCACA i canFam3.chr33 C 0 I 1 s dasNov3.JH569502 3952471 55 + 6579706 CCCGCTCCTGACAGCCCCGT---TAGAACCTCAGTTCCTGG-TTTTAACCCTCAC-CCCA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 480600 286 - 608964 I e mm10.chr16 65476196 1750 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=11313.000000 s hg38.chr3_KI270779v1_alt 196389 7 + 205312 GGGGACA s panTro5.chr3 200182733 7 + 202621043 GGGGACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140227 7 + 190779 GGGGACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29809 7 - 189199 GTGGACA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947820 7 + 123690457 GGGGACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522727 6 + 204787373 GCG-GCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128028 6 + 192460366 GCG-GCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614243 6 + 19675229 GCG-GCA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477235 6 - 91754291 GCG-ACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661462 6 - 1977891 GTG-ACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525160 7 + 7796314 GCGAACA i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29117123 6 + 31377067 GCC-ACA i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3952526 7 + 6579706 GGGAACA i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 480600 286 - 608964 I e mm10.chr16 65476196 1750 - 98207768 I e aotNan1.NW_018507959v1 38937 9 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=176044.000000 s hg38.chr3_KI270779v1_alt 196396 40 + 205312 ---CGTACATGCGGCCACC----ATGGGGACTGAATG----------------------AGGGTGGGCC s panTro5.chr3 200182740 40 + 202621043 ---CATACATGCGGCCACC----ATGGGGACTGAATG----------------------AGGGTGGGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140234 40 + 190779 ---CGTACATGCGGCCACC----ATGGGGACTGAATG----------------------AGGGTAGGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29816 40 - 189199 ---CGTACATGCGGCCACC----ATGGGGACTGAATG----------------------AGGGTGGGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947827 34 + 123690457 ---CGTACATGTAGCCACC----ATGGGGAC----------------------------AAGGTGGGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522733 62 + 204787373 ---CGTACATGTGGCCACC----ATGGGGACTGAATGGGGGTGGGCCATCTTCCCGGACAGGGTGGGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128034 62 + 192460366 ---CGTACATGTGGCCACC----ATGGGGACTGAATGGGGGTGGGCCATCTTCCCGGACAGGGTGGGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614249 62 + 19675229 ---CGTACATGTGGCCACC----ATGGGGACTGAATGGGGGTGGGCCATCTTCCCGGACAGGGTGGGCC i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477241 60 - 91754291 ---CGTACATGTGGTCACC----GTGGGGACAGAATGGGGGCGGGCCATCTTCCCAGACGGG--GGGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661468 62 - 1977891 ---CGTACATGTGGCCACC----ATGGGGACAGAATGGGGGTGGGCCATCTTCCCAGACAGGGTGGGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525167 62 + 7796314 ---CGCACATGTGGCCACC----GTGGGGACTGAATGGGGGTGGGCCATCTTCCCAGACAGGGTGGGCC i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 38946 40 - 3732694 ---CGTACATGTGGCCATG----ATAGGGATGGAATG----------------------AGAGTGGGCC i aotNan1.NW_018507959v1 I 9 I 18 s canFam3.chr33 29117129 43 + 31377067 --------CTCAGGCCATGAATAATGGCGACTG------------------TCCCGCTCACGCTGGACG i canFam3.chr33 C 0 I 3 s dasNov3.JH569502 3952533 39 + 6579706 CTTGGCAGATGCTGTCAGT--------GGACCGAGTA----------------------CTAAAGGACT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 480600 286 - 608964 I e mm10.chr16 65476196 1750 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=98573.000000 s hg38.chr3_KI270779v1_alt 196436 24 + 205312 CACAAAGCT-----CTCCAAC-GCGGGGTT s panTro5.chr3 200182780 24 + 202621043 CACAAAGCT-----CTCCAAT-GCGGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140274 24 + 190779 CACAAAGCT-----CTCCAAC-GCGGGGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29856 24 - 189199 CACAGAGCT-----CTCCAAC-GCGGGGTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947861 23 + 123690457 CACAAAGCT-----CTCCAAC--CGGGGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522795 24 + 204787373 CACAAAGCT-----CTTCGAC-GTGGGATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128096 24 + 192460366 CACAAAGCT-----CTTCGAC-GTGGGATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614311 24 + 19675229 CACAAAGCT-----CTTCGAC-GTGGGATT i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477301 24 - 91754291 CACAAAGCT-----CCTCAAC-GCGGGATT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661530 24 - 1977891 CACAAAGCT-----CTTCGAC-GCGGGATT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525229 24 + 7796314 CACAAAGCT-----CTCCAAC-GTGGGGTT i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29117175 24 + 31377067 -----AGCTGACGCCTCCGAC-CTCAGCCT i canFam3.chr33 I 3 I 1 s dasNov3.JH569502 3952572 20 + 6579706 ----GTCCT-----CTCCAACTGCAGGGC- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 480600 286 - 608964 I e mm10.chr16 65476196 1750 - 98207768 I e aotNan1.NW_018507959v1 38986 18 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=68814.000000 s hg38.chr3_KI270779v1_alt 196460 9 + 205312 CTGACAGAA s panTro5.chr3 200182804 9 + 202621043 CTGACAGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140298 9 + 190779 CTGACAGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29880 9 - 189199 CTGACAGAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947884 9 + 123690457 CTGACAGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522819 9 + 204787373 CTGACAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128120 9 + 192460366 CTGACAGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614335 9 + 19675229 CTGACAGAA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477325 9 - 91754291 CTGACAGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661554 9 - 1977891 CTGACAGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525253 9 + 7796314 CTGACAGAA i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 480886 9 - 608964 TTAACAGAG i otoGar3.GL873829 I 286 C 0 s canFam3.chr33 29117200 9 + 31377067 CTGACGGAG i canFam3.chr33 I 1 C 0 s dasNov3.JH569502 3952592 9 + 6579706 CTGACAGAG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e aotNan1.NW_018507959v1 38986 18 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=323520.000000 s hg38.chr3_KI270779v1_alt 196469 45 + 205312 AGCCC---------AACCCGGGCCGAAAGCCATCTTTTAAAATGAAGTTTACTG s panTro5.chr3 200182813 45 + 202621043 AGCCC---------AACCCAGGCCGAAAGCCATCTTTTAAAATAAAGTTTACTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140307 45 + 190779 AGCCC---------AACCCAGGCCGAAAGCCATCTTTTAAAATAAAGTTTACTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29889 45 - 189199 AGCCC---------AACCCAAGCCGAAAGCCATCTTTTAAAATAAAGTTTACTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947893 45 + 123690457 AGCCC---------AACCCAGGCCGAAAGCCATCTTTTAAAATAAAGTTTACTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522828 45 + 204787373 AGCCC---------AACCCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTACTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128129 45 + 192460366 AGCCC---------AACCCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTACTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614344 45 + 19675229 AGCCC---------AACCCAGGCCATAAGCCATCTTTTAAAATAAAGTTTACTG i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477334 44 - 91754291 AGCCC---------AA-CCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTACTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661563 45 - 1977891 AGCCC---------AACCCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTACTG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525262 45 + 7796314 AGCCC---------AACCCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTACTG i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 39004 45 - 3732694 GGCCC---------AACCCCGGCCGAAAGCTGTCTTCTAAAGTAAAGTTTAAAG i aotNan1.NW_018507959v1 I 18 I 24 s otoGar3.GL873829 480895 54 - 608964 AGCCCAGAACCACAAATCAAGGCCAAAATTTGCCTTTTGAAATAAAGTTGACGG i otoGar3.GL873829 C 0 I 1 s canFam3.chr33 29117209 43 + 31377067 AGTCC---------TGGCCAGCCTAAAGAC--TCTTTTAAAATAAAGCTTACCA i canFam3.chr33 C 0 I 7 s dasNov3.JH569502 3952601 44 + 6579706 -AACC---------AACCCAAGTCTAAAGTGGTCTTTTAAAATAAAGTTTTCTA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=58340.000000 s hg38.chr3_KI270779v1_alt 196514 21 + 205312 -----------G-Gtttcttttttcattataaa- s panTro5.chr3 200182858 21 + 202621043 -----------G-GTTTCTTTTTTCATTATAAA- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140352 21 + 190779 -----------G-Gtttcttttttcattataaa- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29934 20 - 189199 -----------G-GTTTC-TTTTTCATTTTAAA- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947938 21 + 123690457 -----------C-GTTTCTTTTTCCATTATAAA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522873 18 + 204787373 -----------G-GTT---TTTACCATGGTAAA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128174 18 + 192460366 -----------G-GTT---TTTACCATGGTAAA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614389 18 + 19675229 -----------G-GTT---TTTACCATGGTAAA- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477378 18 - 91754291 -----------G-GTT---TTTTCCATTATAAA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661608 18 - 1977891 -----------G-GTT---TTTTCCATGATAAA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525307 19 + 7796314 -----------GTTTT---TTTTCCATTGTAAA- i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 480950 18 - 608964 -----------G-TTT---TGGCCCCTTATAAA- i otoGar3.GL873829 I 1 I 1 s canFam3.chr33 29117259 21 + 31377067 -----------G-Gtttttttccccattataaa- i canFam3.chr33 I 7 I 1 s dasNov3.JH569502 3952645 33 + 6579706 GTTGTGTGTGTG-CTTTCCCCCCCCattataaga i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e aotNan1.NW_018507959v1 39049 24 - 3732694 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=1059578.000000 s hg38.chr3_KI270779v1_alt 196535 171 + 205312 gtaatgcacactgtccacag-agatatgaaaa-tatttaaaagtagagagaag-aaaaa--catcatcaatgtttcaccaccc-------aggaacaa-ccctattaacgcgttgagagatttctggcttgtttctcatacataGCTCATATCCATAGTTTAAATCTATC--ATATCCTAGATATA s panTro5.chr3 200182879 171 + 202621043 GTAATGCACACTGTCCACAG-AGATATGAAAA-TATTTAAAAGTAGAGAGAAG-AAAAA--CATCATCAATGTTTCAGCACCC-------AGGAACAA-CCCTATTAATGCGTTGAGAGATTTCCGGCTTGTTTCTCATACACAGCTCATACCCATAGTTTAAATCTATC--ATATCCTAGATATA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140373 171 + 190779 gtaatgcacactgtccacag-agatatgaaaa-tatttaaaagtagagagaag-aaaaa--catcatcaatgtttcaccaccc-------aggaacaa-ccctattaatgcgttgagagatttccggcttgtttctcatacataGCTCATATCCATAGTTTAAATCTATC--ATATCCTAGATATA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 29954 171 - 189199 GTAATGCACACTGTCCACAG-AGATATGAAAA-TATTTAAAAGTAGAGAAAAG-AAAAA--CATCATCAATGTTTCACCACCC-------AGGAACAA-CCCTATTAATGCGTTGAGAGATTTCTGGCTTGTTTCTCATACATAGCTCATATCCATAGTTTAAATCTATC--ATATCCTAGATATA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120947959 171 + 123690457 GTAATGCACACTCTGCACAG-AGATATGAAAA-TACTTAAACGTAGAGAGAAG-AAAAA--CATCATCAACGTTTCACCACCC-------AGGAACAA-CCCTACCAACGCGTTGAGAGAGTTCTGGCTTGTTCCTCATACATAGCTCATATCCATGGTTTAAATCTATC--ATATCCTAGATATA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202522891 170 + 204787373 GTAATGCACACTCTCCACAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAG-AAAAA--CATCATTGATGTCTCGCCACCC-------TAGAACAA--GCCACTAACGCGCTGAGAGAGCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATCGTTTAAATCGGTC--GTATCCTAGATACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128192 170 + 192460366 GTAATGCACACTCTCCACAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAG-AAAAA--TGTCATTGATGTCTCGCCACCC-------TAGAACAA--GCCACTAACGCGCTGAGAGAGCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATAGTTTAAATCGGTC--GTATCCTAGATACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614407 170 + 19675229 GTAATGCACACTCTCCACAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAG-AAAAA--CATCATTGATGTCTCGCCACCC-------TAGAACAA--GCCACTAACGCGCTGAGAGAGCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATAGTTTAAATCGGTC--GTATCCTAGATACA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477396 170 - 91754291 GTAATGCACACTCTCCATAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAG-AAAAA--CATCATCGATGTGTCGCCACCC-------TAGAACAA--GCCACTAACGCACTGAGAGGTCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATGGTTTAAATCGGTC--GTATCCTAGATACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661626 170 - 1977891 GTAATGCACACTCTCCATAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAG-AAAAA--CATCATCGATGTCGCGCCACCC-------TAGAACAA--GCCACTAACGCGCTGAGAGAGCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATAGTTTAAATCTGTC--GTATCCTAGATACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525326 171 + 7796314 GCAATGCACACTCTCCATAG-AGATATGAAAA-TACTTAAAAGTAGAGAGAAG-AAAAA--CATTATCAATGTCTCACCACCC-------TAGAACAA-CCCCACTAATGCGTTGAGAGATTTCTGGCTTTTTCCTCAAACACAGCTCATAGCCATAGTTTAAATCTGTC--GTATCCTAGATATA i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 39073 163 - 3732694 gtaatatacaccctccatag-agatatgaaaa-tacttaaaaatagaaagaag-aaaaa--catcatcaatatttcaccaccc-------aagaataa-ccctgttaatgcattgatagatttctggctttttccttatacaGAACTCATGTCCATAGTTTAA----------TATCCTAGATAGA i aotNan1.NW_018507959v1 I 24 C 0 s otoGar3.GL873829 480969 179 - 608964 GTAATATATGCT-TTTATAA-ATAAATGGAAACTACTTAAGAGCAGAGAAAGGAAAAAA--TGTCATGAAGGTTTCACCTCCCTCCCCCTAAGAAGAA-GCCTGGCAAATATTTTATATAGACTTGGCCTTTTCCTCATTAATAGCTCATATTcatagttttaatctatt--acatcatagataca i otoGar3.GL873829 I 1 C 0 s canFam3.chr33 29117281 177 + 31377067 gtaatataggcccattatagcaaatatggaaactatttcaaagtaaagagaaa-aaaaaaccatcaccaatgattcaccaccg-------agaaaaac-ctgcctaaatacattgataggtttctagcctcttccccatgaatggctcgtacacacagttttaatctatcatatatcaTGGATACA i canFam3.chr33 I 1 I 1 s dasNov3.JH569502 3952678 174 + 6579706 gtactatatgctccttataacagatatggaaaatacttaaaagtaaagagaag-gaaaa--catcatcactgtttcaccaccc-------aagaacaaatgctattaatacattcatagctttctaaccttttccccatgaatagctcatatacatagttttaatctgta--atatcatagatgta i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=143787.000000 s hg38.chr3_KI270779v1_alt 196706 25 + 205312 GTTTGATCTCCT-CT-TTACCACCTAA s panTro5.chr3 200183050 25 + 202621043 GTTTGATCTCCT-CT-TTACCACCTAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140544 25 + 190779 GTTTGATCTCCT-CT-TTACCACCTAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30125 25 - 189199 GTTTGATCTCCT-CT-TTACCACCTAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948130 25 + 123690457 GTTCGATCTCCT-CT-TTACCACCTAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523061 25 + 204787373 GTTTGGCCTCCT-CG-TTACCACCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128362 25 + 192460366 GTTTGGCCTCCT-CG-TTACCACCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614577 25 + 19675229 GTTTGGCCTCCT-CG-TTACCACCTAA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477566 25 - 91754291 GTTTGGCCTCCT-CG-TTACCACCTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661796 25 - 1977891 GTTTGGCCTCCT-CG-TTACCACCTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525497 25 + 7796314 GTTTGGCCTCCT-CG-TTACCACCTAC i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 39236 25 - 3732694 GTTTGGCCTCCT-CT-TTACCACCTAA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 481148 26 - 608964 atttgtgttcgtact-ttaccacgtaa i otoGar3.GL873829 C 0 C 0 s dasNov3.JH569502 3952852 25 + 6579706 -attgtgttcct-ggaatttcacctca i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=-19906.000000 s hg38.chr3_KI270779v1_alt 196731 5 + 205312 C------------ttta s panTro5.chr3 200183075 5 + 202621043 C------------ttta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140569 5 + 190779 C------------ttta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30150 5 - 189199 C------------ttta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948155 4 + 123690457 C-------------TTA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523086 1 + 204787373 C---------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128387 1 + 192460366 C---------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614602 1 + 19675229 C---------------- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477591 17 - 91754291 CTCtatttatttattta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661821 1 - 1977891 C---------------- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525522 1 + 7796314 C---------------- i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 39261 1 - 3732694 C---------------- i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3952877 5 + 6579706 ------------catta i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=34095.000000 s hg38.chr3_KI270779v1_alt 196736 20 + 205312 tttattta----tttatttat-tca s panTro5.chr3 200183080 24 + 202621043 tttatttacttatttatttat-tta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140574 24 + 190779 tttatttacttatttatttat-tta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30155 21 - 189199 tttattta----tttatttttatta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948159 21 + 123690457 Cttattta----tttatttatttta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523087 12 + 204787373 ------------tttatttat-tta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128388 12 + 192460366 ------------tttatttat-tta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614603 12 + 19675229 ------------tttatttat-tta i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477608 20 - 91754291 tttattta----tttatttat-tta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661822 12 - 1977891 ------------tttatttat-tta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525523 16 + 7796314 ----ttta----tttatttat-tta i colAng1.NW_012118932v1 C 0 C 0 s aotNan1.NW_018507959v1 39262 1 - 3732694 ------------t------------ i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e canFam3.chr33 29117458 1 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e calJac3.chr17 987266 20 - 74750902 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=7677.000000 s hg38.chr3_KI270779v1_alt 196756 9 + 205312 ttttta----tta- s panTro5.chr3 200183104 9 + 202621043 ttttta----tta- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140598 13 + 190779 tttatattagtta- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30176 8 - 189199 tttat-----tta- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948180 6 + 123690457 ttt-------ata- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523099 8 + 204787373 tttat-----ttt- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128400 8 + 192460366 tttat-----tta- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614615 8 + 19675229 tttat-----tta- i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477628 8 - 91754291 tttat-----ttt- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661834 8 - 1977891 tttat-----ttt- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525539 8 + 7796314 tttat-----ttt- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987286 9 - 74750902 ttctt-----tttc i calJac3.chr17 I 20 C 0 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e canFam3.chr33 29117458 1 + 31377067 I e aotNan1.NW_018507959v1 39263 0 - 3732694 C e cebCap1.NW_016107444v1 480355 31 - 6778120 I e saiBol1.JH378146 504916 20 + 17725628 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=46253.000000 s hg38.chr3_KI270779v1_alt 196765 12 + 205312 tttatttattta s panTro5.chr3 200183113 12 + 202621043 tttatttattta i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140611 12 + 190779 tttatttattta i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30184 12 - 189199 tttatttattta i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948186 12 + 123690457 tttatttattta i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523107 12 + 204787373 atttattattta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128408 12 + 192460366 ttttattattta i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614623 12 + 19675229 ttttattattta i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477636 12 - 91754291 attaattattta i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661842 12 - 1977891 atttattattta i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525547 12 + 7796314 atttattattta i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987295 12 - 74750902 tttttttttttt i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504936 12 + 17725628 tttttttctctt i saiBol1.JH378146 I 20 C 0 s aotNan1.NW_018507959v1 39263 8 - 3732694 -tttttttt--- i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e canFam3.chr33 29117458 1 + 31377067 I e cebCap1.NW_016107444v1 480355 31 - 6778120 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=110988.000000 s hg38.chr3_KI270779v1_alt 196777 17 + 205312 ttttgagacagagtct--c s panTro5.chr3 200183125 17 + 202621043 ttttgagacagagtct--c i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140623 17 + 190779 ttttgagacagagtct--c i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30196 17 - 189199 tttCgagacagagtct--c i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948198 17 + 123690457 ttttgagacacagtct--c i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523119 17 + 204787373 ttttgagacggagtct--g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128420 17 + 192460366 ttttgagacggagtct--g i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614635 17 + 19675229 ttttgagatggagtct--g i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477648 17 - 91754291 ttttgagacggagtct--c i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661854 17 - 1977891 ttttgagacggagtct--g i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525559 17 + 7796314 ttttgagacggagtct--c i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987307 16 - 74750902 ttttgagacggagtct--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504948 17 + 17725628 ttttgagacggagtctc-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480386 16 - 6778120 ttttgagatggagtct--- i cebCap1.NW_016107444v1 I 31 C 0 s aotNan1.NW_018507959v1 39271 17 - 3732694 ttttgagacggagttt-c- i aotNan1.NW_018507959v1 C 0 I 592 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e canFam3.chr33 29117458 1 + 31377067 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=2129765.000000 s hg38.chr3_KI270779v1_alt 196794 266 + 205312 gctctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggattataggct-cgtgcccccatgcctggctaa---tttttgtattttcagtagagac-ggggtttcaccatgttggtcaggctggtcccaaactcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcgccgggc s panTro5.chr3 200183142 266 + 202621043 gttctgtcacccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcctgggttcatgccattctcctgcctcagcctcccgagtagctgggattataggct-cgtgcccccatgcctggctaa---tttttgtattttcagtagagac-ggggtttcaccatgttggtcaggctagtcccaaactcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcgccaggc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140640 267 + 190779 gctctgtcacccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcctgggttcacgccattctcctgcctcagcctcctgagtagctgggattataggct-cgtgcccccatgcctggctaa---tttttgtattttcagtagagacgggggtttcaccatgttggtcaggctggtcccaaactcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcgccgggc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30213 265 - 189199 gctctgtcacccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggattataggct-cgtgcccccatgcctggctaa---tttttgtattttcagtagagat-ggggtttcaccatgttggtcaggctagtcccaaactcctgaccttgtgatccgccc-cctcagcctcccaaagtgctgggattacaggcgtgagccactgcgccgggc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948215 266 + 123690457 gctctgttgcccaggctagagtgcagtggtgtgatcttggctcactgcaacctccgcctcctgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggct-catgcccccatgcctggctaa---tttttgtatttttggtagagac-ggggtttcaccatgttggttgggctggtctcaaactcctgaccttgtgatccacccgccttggcctcgcaaagtgctgggattacaggcgtgagccaccgcgcccggc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523136 264 + 204787373 gctctgtggcccaggctggagtgcggtggcgcgatctcggctcactgcaagctccacctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-c-cgccaccacaccgggctaa---tttttgtgttttc-gtagagac-ggggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatccacctgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128437 264 + 192460366 gctctgtggcccaggctggagtgcggtggcgcgatctcggctcactgcaagctccacctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-c-cgccaccacaccgggctaa---tttttgtgttttc-gtagagac-ggggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatccacctgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614652 264 + 19675229 gctctgtggcccaggctggagtgcggtggctcaatctcggctcactgcaagctccacctcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-c-cgccaccacaccaggctaa---tttttgtgttttc-gtagagac-ggggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatccacctgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477665 264 - 91754291 gctctgtcgcccaggctggagtgcagtgacgcgatctcaactcaccacaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcg-c-cgccaccacacccggctaa---tttttgtgttttc-gtagagac-aaggtttcaccatgttgatcaggctggtctcaaactcctgaccttgtgatccgcccgccttggcctcccaaaatgctgggattacaggcatgagccaccatgcccggc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 661871 257 - 1977891 gctctgtggcccaggctggagtgcggtggtgcgatct--------tgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-c-cgccaccgcgcccggctaa--ttttttgtatttta-gtagagac-ggggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatctgcccgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525576 265 + 7796314 tctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcccgggttcacgcgattctcctgcctcagtcacccgagtagctgggactacaggcgcc-cgccacctcgcccggctaa---tttttgtgttttc-gtagagac-ggggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatccgcccgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987323 267 - 74750902 gttctgtcacccaggctggagtgcagtggcacgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtaggtgggattacaggca-cccactaccacacctggctaa-attttttgtatttttagtagagat-ggggtttgagcatgttggtcaggctggtctcgaactcctgaccttgtgatctgcccgccttggcccctcaaagtgctgggattacaggtgtgagcc-ctgcgcccggc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 504965 269 + 17725628 actctgtcacccaggctggagtgcaatggcacgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggca-tgtgccaccacacctggctaattttttttgtatttttagtagagat-agggtttcaccatgttggtcaggctggtctcgaactcctgactttgtgatctgcccgcctcagccccccaaagtgctgggattacaggcgtgagccaccgcgcccggc i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480402 266 - 6778120 gctctgtcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggca-cacaccaccacacctggctaa-tttttttgtatttttagtagagat-ggggtttcaccatgttggtcaggctggtctcgaactcctgaccttgtgatctgcccagctcggccccg-aaagtgctgggatgacaggcatgagcc-ctccgcccggc i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 39880 257 - 3732694 gctctgtcacccaggctggcgtgcggtggcgcgatctcggctcaccgcaagctctgcctcccgggttcaagtgattctcctgcctcagcctcccgggtagctgggactacaggca-tgcaccaccacacctggctaa--ttttttgtatttttagtagagat-ggggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatctgcccaccttggccccccagagtgct---------ggcgtgagcc-ctgcgcccggc i aotNan1.NW_018507959v1 I 592 C 0 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e canFam3.chr33 29117458 1 + 31377067 I e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=4720.000000 s hg38.chr3_KI270779v1_alt 197060 10 + 205312 cATGACCTAG s panTro5.chr3 200183408 10 + 202621043 cATGACCTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140907 10 + 190779 cATGACCTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30478 10 - 189199 cATGACCTAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948481 10 + 123690457 cACGACCTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523400 10 + 204787373 cCCCATCTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128701 10 + 192460366 cCCCATCTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614916 10 + 19675229 cCCCATCTAA i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477929 10 - 91754291 cCCCACCTAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662128 10 - 1977891 cCCCACCTAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525841 10 + 7796314 cCCCACCTAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987590 1 - 74750902 c--------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505234 1 + 17725628 T--------- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480668 1 - 6778120 c--------- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 40137 1 - 3732694 c--------- i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29117459 10 + 31377067 CACCACGTAA i canFam3.chr33 I 1 C 0 e otoGar3.GL873829 481174 0 - 608964 C e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=-1549.000000 s hg38.chr3_KI270779v1_alt 197070 1 + 205312 -C s panTro5.chr3 200183418 1 + 202621043 -C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140917 1 + 190779 -C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30488 1 - 189199 -C i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948491 1 + 123690457 -C i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523410 1 + 204787373 -C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128711 1 + 192460366 -C i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614926 1 + 19675229 -C i macNem1.NW_012014355v1 C 0 C 0 s chlSab2.chr15 477939 1 - 91754291 -T i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662138 1 - 1977891 -C i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525851 1 + 7796314 -C i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 481174 1 - 608964 -t i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29117469 1 + 31377067 G- i canFam3.chr33 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e aotNan1.NW_018507959v1 40138 0 - 3732694 C e cebCap1.NW_016107444v1 480669 0 - 6778120 C e calJac3.chr17 987591 0 - 74750902 C e saiBol1.JH378146 505235 0 + 17725628 C e cerAty1.NW_012004056v1 546183 883 + 16847902 I a score=22178.000000 s hg38.chr3_KI270779v1_alt 197071 3 + 205312 TTT s panTro5.chr3 200183419 3 + 202621043 TTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140918 3 + 190779 TTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30489 3 - 189199 TTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948492 3 + 123690457 TTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523411 3 + 204787373 TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128712 3 + 192460366 TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614927 3 + 19675229 TTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547066 3 + 16847902 TTT i cerAty1.NW_012004056v1 I 883 C 0 s chlSab2.chr15 477940 3 - 91754291 TTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662139 3 - 1977891 TTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525852 3 + 7796314 TTT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 481175 3 - 608964 ttt i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29117470 3 + 31377067 GTT i canFam3.chr33 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e dasNov3.JH569502 3952882 0 + 6579706 C e aotNan1.NW_018507959v1 40138 0 - 3732694 C e cebCap1.NW_016107444v1 480669 0 - 6778120 C e calJac3.chr17 987591 0 - 74750902 C e saiBol1.JH378146 505235 0 + 17725628 C a score=125741.000000 s hg38.chr3_KI270779v1_alt 197074 37 + 205312 AAACCT-AAAAGTCTC-CCCAATTATTATAAA-ACTCCAT s panTro5.chr3 200183422 37 + 202621043 AAACCT-AAAAGTCTC-CCCAATTATTATAAA-ACTCCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140921 37 + 190779 AAACCT-AAAAGTCTC-CCCAGTTATTATAAA-ACTCCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30492 37 - 189199 AAACCT-AAAAGTCTC-CCCAATTATTATAAA-ACTCCAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948495 36 + 123690457 -AGCCT-AAATGTCTC-CCCAGTTATTACAAA-ACTCTAT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523414 37 + 204787373 AAACCT-AAACACCTC-CCCCATTATTACAAA-ACTTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128715 37 + 192460366 AAACCT-AAACACCTC-CCCCATTATTACAAA-ACTTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614930 37 + 19675229 AAACCT-AAACACCTC-CCCCATTATTACAAA-ACTTCAT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547069 36 + 16847902 AAACCT-AAACATCT--CCCCATTATTACAAA-ACTTCAT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 477943 37 - 91754291 AAACCT-AAACGTCTC-CCCCATTATTACAAA-ACTTCAT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662142 37 - 1977891 AAACCT-AAACGTCTC-CCCCATTATTACAAA-ACTTCAT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525855 37 + 7796314 AAACCT-AAACGTCTC-CCCCATTATTACAAA-ACTTCAT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987591 4 - 74750902 ------------------------------------TCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505235 4 + 17725628 ------------------------------------GTAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480669 4 - 6778120 ------------------------------------TCAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 40138 4 - 3732694 ------------------------------------TCAT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 481178 38 - 608964 aaacctgaaatatttc-ctctgttactataaa-acttcat i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29117473 39 + 31377067 AAACCC-GAGCATTTCTTCCTGTCAGTATGAACACGTCAG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3952882 39 + 6579706 aaacat-aaacatttcttcccattattataaacactacat i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I a score=815808.000000 s hg38.chr3_KI270779v1_alt 197111 83 + 205312 TCACACATTTCTGAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGG-CGT s panTro5.chr3 200183459 83 + 202621043 TCACACATTTCTGAAGGCCACGTGATACTGC----ATTGGCTA----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGG-CGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 140958 83 + 190779 TCACACATTTCTGAAGGCCACGTGATACTGC----ATTGACTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGG-CGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30529 83 - 189199 TCACACATTTCTGAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGG-CGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948531 83 + 123690457 TCACACATTTCTGAAGGCCACGTGATACGGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAT-TGTGTTATTCACGG-CGT i nomLeu3.chr11 C 0 M 319 s rheMac8.chr2 202523451 84 + 204787373 TCACACATTTCCAAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGGTCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128752 84 + 192460366 TCACACATTTCCAAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACAGTCGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 614967 84 + 19675229 TCACACATTTCCAAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGGTCGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547105 84 + 16847902 TCACACATTTCCGAAGGCCACGTGATACTGC----ATTGCTGC----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGGTCGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 477980 84 - 91754291 TCACACATTTCTGAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TCACTTGGACAC-TGGGTTATTCACGGTCGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662179 84 - 1977891 TCACACATTTCCAAAGGCCATGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGGTCGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525892 84 + 7796314 TCACACATTTCCGAAGGCCACGTGATACTGC----ATTGGCTG----CCACCATAACTGAAC----------CAACTCGGACAC-TGGGTTATTCACGGTCGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987595 82 - 74750902 TCGCACTTTTCTAAAGGCCACGTGATATTGC----ATTGACTG----CCATCGTATCTGAAC----------TAACTCGGACAT---GGTTATTCTCGGTCAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505239 82 + 17725628 TCGCACTTCTCTAAAGGCCACGTGATATTCC----ACCGACAG----CCATTGTATCTGAAC----------TCACTCGGACAC---AGTTATTCGCGGTCGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480673 82 - 6778120 TGGCACCGTTCTAAAGGCCACGTGATATTGC----ATTGACTG----CCATTGTATCTGAAC----------TAACTCGGACGT---GGTTATTCGAGGTCGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 40142 82 - 3732694 TCGCACTTTTCCAAAGGCCACATGATATGGC----ATCGACTG----CCGTCGTATCTGAAC----------TAACTCGGACAC---GGTTATTCACAGTCTC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 481216 85 - 608964 tcacacatttttaaagagtgcacaatattct----atagactg----ccacccttacttaag----------taggttggacacttgggttgttcacagctgt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65477946 88 - 98207768 TCACATACTTTTAAAGACAACATAATACGCC----ACCGAATG----CCACCATG--TGCACCCTGTGTATATAACTTGTTTAAATGAGTCAGACAGT----- i mm10.chr16 I 1750 I 2 s canFam3.chr33 29117512 73 + 31377067 TCACGTA----CAAATTTCTCATGACATTCC----ATCGAGTGGACTCTACCATA--TG-------------TTGTTTAGTTAT-------GTTCACAGTTGT i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3952921 89 + 6579706 tcacatattttcaaagactacccaatattccttgagtggactg----ctgtcataacttatt----------gaagctggacatgtgggttgtttctaattgt i dasNov3.JH569502 C 0 C 0 a score=2287556.000000 s hg38.chr3_KI270779v1_alt 197194 234 + 205312 CCCTGTTACAGGTAATGCCCGGATCAGAGGCTTTGTACCCAAAGTGCCTTCTGTGTTC-AGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTT---CTACAGTCAGAAGTCCATAAACATGAGCTTGCTC-TGTC--CAGGATGTC-GGCACTTTTTTGGACACTT--GTGATCAATTAACCCTTTTAATGTTGATGGTCTAATGGCGGAAGCA s panTro5.chr3 200183542 234 + 202621043 CCCTGTTACAGGTAATGCCCGGATCAGAGGCTTTGTACCCAAAGTGACTTCTGTGTCC-AGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCAGCGGCTCTGACCTTCCTT---CTACAGTCAGAAGTCCATGAACATGAGCTTGCTC-TGTC--CAGGATGTC-GGCACTTTTTTGGACACTT--GTGGTCAATTAACCCTTTTAATGTTGATGGTCTAATGGCGGAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141041 225 + 190779 CCCTGTTACAGGTAATGCCCGGATCAGAGGCTTTGTACCCAAAGTGACTTTTGTGTCC-AGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACC------------CGATCAGAAGTGCATGAACATGAGCTTGCTC-TGTC--CAGGATGTC-GGCACTTTTTTGGACACTT--GTGGTCAATTAACCCTTTTAATGTTGATGGTCTAATGGCGGAAGCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30612 234 - 189199 CCCTGTTACAGGTAATGCCCGGATCAGAGGCTTTGTACCCAAAGTGCCTTCTGTGTTC-AGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCGGTGGCTCTGACCCTCCTT---CTACAGTCAGAAGTCCATGAACATGAGCTTGCTC-TGTC--CAGGATGTC-GGCACTTTTTTGGACACTT--GTGGTCAATTAACTCTTTTAATGTTGATGGTCTAATGGTGAAAGCA i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202523535 238 + 204787373 CCCTGTTACGGGTAATGCCCGGAGAAGAGGCTTTGTGCCCAGCGTGCCTTCTGCGTTT-AGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTC--CAGGACGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 128836 238 + 192460366 CCCTGTTACGGGTAATGCCCGGAGAAGAGGCTTTGTGCCCAGCGTGCCTTCTGCGTTT-AGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTC--CAGGACGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615051 238 + 19675229 CCCTGTTACGGGTAATGCCCAGAGAAGAGGCTTTGTGCCCAGCGTGCCTTCTGCGTTT-AGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTC--CAGGACGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547189 238 + 16847902 CCCTGTTACGGGTAACGCCGGGAGAAGAGGCTTTGTGCCCAA-ACACCTTCTGTGTTTAAGGGTCATTTCCTGACCATGAAAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGT---CAGGCCATCGGGCACTTTTTTGGATACCT--GTGGCCAATTGTCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478064 235 - 91754291 CCCTGTTACAGGTAATGCCGGGAGAAGAGGCTTTGTGCCCAAAGCACCTTCTGTGTTT-AGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTT---CTACAGTCGGAAGCCCAAGAACATGAGCGCGCTC-TGTC--CAGGATGTTGGGCACTTTTTTTGATACCT--GTGGCCAATTGTCTCTTTTAATGTTGATGGTCTCAAGGTGGAGGCA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662263 238 - 1977891 CCCTGTTACGGGTAACGCCGGGAGAAGAGGCTTTGTGCCCAAAGCACCTTCTGCGTTT-AGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTC--CAGGACGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 525976 238 + 7796314 CCCTGTTACGGGTAATGCCCGGAGAAGAGGCTTTGTGCCCAGAGCGCCTTCTGTGTTT-AGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCCGATTGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCATGAACCTGAGCTCGCTC-TGTC--CAGGACGTCGGGCACTTTGTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987677 238 - 74750902 TCCTGCTACAGGTAACGCCCAGATGAGAGGCTTTGTACCCAAAGTGCCCTCTGTGTTT-ACGCTCATTTCCTGGACGTG-GAAGCAGGGCAGCTGTGTTCTGATCGGCGGCTCTGACCCTCCTTATCCTACAGTCGGAAGTCCATGAACGTGAGCTCGCTC-TGTC--CAGGATGTTGGGCACTTTTTTGGACACTT--GTGGTCAATTAACTCTTTTAATGTTGATGGTCTAATGGTGGAGGCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505321 237 + 17725628 CCCTGCTACAGGTAACGCCCAGATGAGAGGCTTTGTACCCAAAGTGCCCTCTGTGTTT-AGGCTCATTTCCTGGACCTG-GAAGCAGGGGAGGTGTGTTCTGATCGGCAGCTCTGACCCTCCTTATCCTACAGTCGAAAGTCCATGAACATGAGCTCGCTC-TGTC--CAGAATGTTGGGCACTTTTTTGGACACTT--GTGGTCAATT-ACTCTTTTAATGTTGATGGTCTAATGGTGGAGGCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480755 238 - 6778120 CCTTGCTACCGGTAACGCCCGGAGGAGAGGCTTTGTACCCAAAGTGCCCTCTGTGTTT-AGGCTCATTTCCTGGACCTG-GGAGCAGGGCAGGTGTGTTCTGATTGGTGGCTCTGACCCTCCTCATGCTACAGTCGGAAGTCCATGAACGTGAGCTCGCCC-TGTC--CACGATGTTGGGCACTTTTTTGGACACTT--GCAGCCAATTAACTCTTTTAATGTTGGCGGTCTAACGGTGGAGGCA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 40224 238 - 3732694 CCCTGCCGCAGGTAACGCCCGGGTGAGAGGCTTTGTACCCACAGCGCCCTCTGTGTTT-AGGCTCATTTCCTGGACCTG-GAAGCAGGGCAGGTGTGTTCCGATGGGCGGCTCTGACCCTCCTTATCCCACAGTCGGAAGTCCGTGAACGTGAGCTCGCTC-CCTC--CGGGATGTCGGGCACTTTTTTAGACACTT--GTGGTCAATTAACTCTTTCAATGCTGATGGTCTAATGGTGGAGGCA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 481301 199 - 608964 ccctattacaagtaatacagagatgagagttttcgtacccaaatctccttctGTATTC-AAGCTCATCT----GAGCTA-GAGTCAAGTGTGGTGTG----AGAAGGCAGCTCTG-------------------------------AATGCGAGCTAGCCA-AGTC--TAGGAAGTAGGGCATATGCTTAGATGCTC--GGGGTCAATTAATTTTTTTCATGTTGACAGTCTAATGGTAGAGGCA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65478036 210 - 98207768 GGTTGTTACAAGGCATGTAGAGATAACAGTTTCGGTACCCACAGCCCCTCCTGTATTT-----------TCTCAAGCTA-GACCCAGTCCTGGATCGCTTTGCTCCACAGGT----------------TATAGCAGGAAGTT----GACAGGGACTAGCTT-ATTA--CAGGATATAAAATGTTTTCTTGGACATTTAGGGGGTCCATTAGATCTGTTAATGTTGACAACCTAATGGGAGAGGCA i mm10.chr16 I 2 C 0 s canFam3.chr33 29117585 229 + 31377067 CCTTATTACGAGTAATGTAGAATTGAGAGTCTT-GTGCCTAAAGCTCCTTGCATATCT-AAGCTCTTT-----GGATTA-GGGTCAGGCTTTGTGTGTTTTTGTACACTGCTCTGACCTTCCTT---CTAGAGCAGGAAGTCAATGAACACGAATTAGCTTGTCTA--CAGGATGTGGGGTGCATTCTTGAACACTT--GGGGCCCATTGAGTCTCT-AATGCTGACAGACTGATGGTAGAGGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3953010 240 + 6579706 ccctattggacataatgcagatatgagaggctttgtgtctaaagctctgtCTTTATTT-AGGTGCATGTCCTGAAGCTG-GAGTCAGGGCTAGTGGGTTGTGCTCAGCTGCTCTGACCTTCCCTCTCCTACAGCAGGAAGTCAAGGAATAAGAACCAGGTA-TGTCCACAGGGTGTGGGCTGTATTTTTGGACACTT--GGGGTCCATTAGATCTCTAAATGTTGACAGTCTCATGATAGAGGCA i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120948614 319 + 123690457 M a score=35929.000000 s hg38.chr3_KI270779v1_alt 197428 4 + 205312 -GAGC s panTro5.chr3 200183776 4 + 202621043 -GAGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141266 4 + 190779 -GAGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30846 4 - 189199 -GAGC i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202523773 4 + 204787373 -AAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129074 4 + 192460366 -AAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615289 4 + 19675229 -AAGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547427 4 + 16847902 -AAGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478299 4 - 91754291 -AAGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662501 4 - 1977891 -AAGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526214 4 + 7796314 -AAGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987915 4 - 74750902 -AAGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505558 4 + 17725628 -AAGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 480993 4 - 6778120 -AAGC i cebCap1.NW_016107444v1 C 0 I 12 s aotNan1.NW_018507959v1 40462 4 - 3732694 -AAGC i aotNan1.NW_018507959v1 C 0 I 12 s mm10.chr16 65478246 4 - 98207768 -CAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29117814 4 + 31377067 -AAAC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3953250 4 + 6579706 AGAG- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 481500 0 - 608964 C e nomLeu3.chr11 120948614 319 + 123690457 M a score=55994.000000 s hg38.chr3_KI270779v1_alt 197432 8 + 205312 TGACAATG s panTro5.chr3 200183780 8 + 202621043 CAACAATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141270 8 + 190779 CGACAATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30850 8 - 189199 CGACAATG i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202523777 8 + 204787373 CAACAATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129078 8 + 192460366 CAACAATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615293 8 + 19675229 CAACAATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547431 8 + 16847902 CAACAATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478303 8 - 91754291 CAACAATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662505 8 - 1977891 CAACAATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526218 8 + 7796314 CAACAATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987919 8 - 74750902 CCACAACA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505562 8 + 17725628 CCACAACA i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65478250 8 - 98207768 CGAGAGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29117818 8 + 31377067 CAACAGAA i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3953254 8 + 6579706 CAACAGTG i dasNov3.JH569502 C 0 I 18 e otoGar3.GL873829 481500 0 - 608964 C e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e nomLeu3.chr11 120948614 319 + 123690457 M a score=9100.000000 s hg38.chr3_KI270779v1_alt 197440 1 + 205312 G s panTro5.chr3 200183788 1 + 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141278 1 + 190779 G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30858 1 - 189199 G i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202523785 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129086 1 + 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615301 1 + 19675229 G i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547439 1 + 16847902 G i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478311 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662513 1 - 1977891 G i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526226 1 + 7796314 G i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987927 1 - 74750902 G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505570 1 + 17725628 G i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65478258 1 - 98207768 G i mm10.chr16 C 0 C 0 e otoGar3.GL873829 481500 0 - 608964 C e dasNov3.JH569502 3953262 18 + 6579706 I e canFam3.chr33 29117826 0 + 31377067 C e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e nomLeu3.chr11 120948614 319 + 123690457 M a score=2109.000000 s hg38.chr3_KI270779v1_alt 197441 1 + 205312 g s panTro5.chr3 200183789 1 + 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141279 1 + 190779 g i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30859 1 - 189199 g i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202523786 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129087 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615302 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547440 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478312 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662514 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526227 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s mm10.chr16 65478259 1 - 98207768 G i mm10.chr16 C 0 I 14 s canFam3.chr33 29117826 1 + 31377067 G i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 481500 0 - 608964 C e dasNov3.JH569502 3953262 18 + 6579706 I e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e calJac3.chr17 987928 0 - 74750902 C e saiBol1.JH378146 505571 0 + 17725628 C e nomLeu3.chr11 120948614 319 + 123690457 M a score=430124.000000 s hg38.chr3_KI270779v1_alt 197442 93 + 205312 gccgggcgc---tgtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgagg-tcgggagttcaagaccagc--ctgac--- s panTro5.chr3 200183790 93 + 202621043 gccaggcgc---tgtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgagg-tcgggagttcaagaccagc--ctgac--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141280 93 + 190779 gccaggcgc---tgtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgagg-tcgggagttcaagaccagc--ctgac--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30860 93 - 189199 gccgggcac---tgtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgagg-tcgggtgttcaagaccagc--ctgac--- i gorGor5.CYUI01000254v1 C 0 C 0 s rheMac8.chr2 202523787 94 + 204787373 gccgggcac---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaagcaggaggatcacctgaggttcgggagttcaagaccagc--ctgac--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129088 93 + 192460366 gccgggcat---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaagcaggaggatcacctgaga-tcgggagttcaagaccagc--ctgac--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615303 93 + 19675229 gccgggcac---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaagcaggaggatcacctgagg-tcgagagttcaagaccagc--ctgac--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547441 93 + 16847902 gccgggcgc---ggtggctca---------cgcctgtaatcccagcactttgggaggccaaggtgggaggatcacctgagg-tcgggagttcaagatcagc--ctggc--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478313 93 - 91754291 gccgggtgc---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaggtgggaggatcacctgagg-tcgggagttcaagaccagc--ctgac--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662515 93 - 1977891 gccgggcgc---ggtggctca---------cgcctgtaatcccagcactttgggaggccaaggtgggaggatcacccgaga-tcgggagttcaagaccagc--ctggc--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526228 93 + 7796314 gctgggcgc---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggaggatcacctgagg-tcgggagtttgagaccagc--ctgat--- i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29117827 92 + 31377067 GAgggacacttgggtggctcagtggatgagcgtctgc----------ctttg---gcccagggcgtgat-----cctggag-acccaggatcgagtcccacatctggctcc i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 481500 0 - 608964 C e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e calJac3.chr17 987928 0 - 74750902 C e saiBol1.JH378146 505571 0 + 17725628 C e nomLeu3.chr11 120948614 319 + 123690457 M a score=181133.000000 s hg38.chr3_KI270779v1_alt 197535 34 + 205312 aaacatggagaaaccccatctctactaaaaat--ac s panTro5.chr3 200183883 34 + 202621043 aaacatggagaaaccccatctctactaaaaat--ac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141373 34 + 190779 aaacatggagaaaccccatctctactaaaaat--ac i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30953 34 - 189199 aaacatggagaaaccccatctctactaaaaat--ac i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948935 36 + 123690457 Aaacatggagaaaccccatctctactaaaaataaaa i nomLeu3.chr11 M 319 C 0 s rheMac8.chr2 202523881 34 + 204787373 caacatggagaaaccccatctctactaaaaat--ac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129181 34 + 192460366 caacatggagaaaccccgtctctactaaaaat--ac i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615396 34 + 19675229 caacatggagaaaccccgtctctactaaaaat--ac i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547534 34 + 16847902 caacatggagaaaccccgtctctactaaaaat--ac i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478406 34 - 91754291 caacatggagaaaccccgtctctactaaaaat--ac i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662608 34 - 1977891 caacatggagaaaccccgtctctactaaaaat--ac i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526321 34 + 7796314 caacatggagaaaccccgtctctactaaaaat--ac i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29117919 10 + 31377067 ctgcatggag-------------------------- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 481500 0 - 608964 C e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e calJac3.chr17 987928 0 - 74750902 C e saiBol1.JH378146 505571 0 + 17725628 C a score=89880.000000 s hg38.chr3_KI270779v1_alt 197569 13 + 205312 aaacttagtagaa s panTro5.chr3 200183917 13 + 202621043 aaacttagtagaa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141407 13 + 190779 aaacttagtagaa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 30987 13 - 189199 aaacttagtagaa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948971 13 + 123690457 aaatttagtagaa i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523915 13 + 204787373 aaacttagtagaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129215 13 + 192460366 aaacttagtagaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615430 13 + 19675229 aaacttagtagaa i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547568 13 + 16847902 aaacttagtagaa i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478440 13 - 91754291 aaacttagtagaa i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662642 13 - 1977891 aaacttagtagaa i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526355 13 + 7796314 aaacttagtagaa i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 481500 13 - 608964 AAACCCAGTAGAA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I e canFam3.chr33 29117929 0 + 31377067 C e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e calJac3.chr17 987928 0 - 74750902 C e saiBol1.JH378146 505571 0 + 17725628 C a score=711257.000000 s hg38.chr3_KI270779v1_alt 197582 142 + 205312 atgttggtggtgtgcacctgtagtcccagctacctgggaggctgagggaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcc-tgggcaacaagagcgaaactccgtct s panTro5.chr3 200183930 142 + 202621043 atgttggtggtgggcacctgtagtcccagctacttgggaggctgagggaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcataccactgcactccagtc-tgggcaacaagagcgaaactccgtct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141420 142 + 190779 atgttggtggtgggcacctgtagtcccagctacttgggaggctgagggaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcataccactgcactccagtc-tgggcaacaagagcgaaactccgtct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31000 142 - 189199 atgttggtggtgtgcacctgtagtcccagctacttgggaggctgagggaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcc-tgggcaacaagagcgaaactccgtct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120948984 142 + 123690457 atggtggtggtgtgcacctgtagtcccagctacttgggaggctgagggaggagaatcgcttgaacctgggaggcggaggttgcggtgagccgagatcgcaccactgcactccagcc-tgggcaacaagagcgaaactccgtct i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202523928 139 + 204787373 a---ttgtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcc-tgcgcaacaagaaagaaactccatct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129228 139 + 192460366 a---ttgtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcc-tgcgcaacaagagagaaactccatct i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615443 139 + 19675229 a---ttgtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcc-tgcgcaacaagagagaaactccatct i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547581 139 + 16847902 a---tggtggcgggcccctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcc-tgcgcaacaagagagaaactccgtct i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478453 139 - 91754291 a---tggtggtgggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacttgggaggcagaggtagtagtgagctgagatcacgctactgcactccagcc-tgcgcaacaagagagaaactccatct i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662655 139 - 1977891 a---ttgtggcgggcgcctgtaatcccagctactcaggaggctgaggcaggtgaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcc-tgcgcaacaagagagaaactccatct i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526368 142 + 7796314 atgttggtggtgggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgagaggcagaggttgcagtgagctgagatcacgctactgcactccagcc-tgggcgacaagagcaaaaccccatct i colAng1.NW_012118932v1 C 0 C 0 s canFam3.chr33 29117929 60 + 31377067 ----------------cctgcttctccctctgcctg--------------------------------------------------------------tgtctctgcctctcactcatgaataaataaataaaatctt----- i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 481513 0 - 608964 C e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e calJac3.chr17 987928 0 - 74750902 C e saiBol1.JH378146 505571 0 + 17725628 C a score=104986.000000 s hg38.chr3_KI270779v1_alt 197724 20 + 205312 tgaa--ataataaaataaaata s panTro5.chr3 200184072 15 + 202621043 tgaa--a-----aaataaaata i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141562 20 + 190779 tgaa--aaaataaaataaaata i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31142 20 - 189199 tgaa--aaaataaaataaaata i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949126 20 + 123690457 caaa--aaaataaaataaaata i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524067 20 + 204787373 taaa--aaaataaaataaaata i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129367 20 + 192460366 taaa--aaaataaaataaaata i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615582 20 + 19675229 taaa--aaaataaaataaaata i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547720 20 + 16847902 taaa--aaaataaaataaaata i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478592 20 - 91754291 taaa--aaaataaaataaaata i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662794 20 - 1977891 taaa--aaaataaaataaaata i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526510 22 + 7796314 caaaataaaataaaataaaata i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 481513 11 - 608964 TGAG--ACAATAA--------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29117989 20 + 31377067 taaa--aaaaaAAAAAAAAAGA i canFam3.chr33 C 0 C 0 e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I e calJac3.chr17 987928 0 - 74750902 C e saiBol1.JH378146 505571 0 + 17725628 C a score=24300.000000 s hg38.chr3_KI270779v1_alt 197744 3 + 205312 aat s panTro5.chr3 200184087 3 + 202621043 aaT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141582 3 + 190779 aat i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31162 3 - 189199 aat i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949146 3 + 123690457 aat i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524087 3 + 204787373 aat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129387 3 + 192460366 aat i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615602 3 + 19675229 aat i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547740 3 + 16847902 aat i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478612 3 - 91754291 aat i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662814 3 - 1977891 aat i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526532 3 + 7796314 aat i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987928 3 - 74750902 AAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505571 3 + 17725628 AAC i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29118009 3 + 31377067 AAC i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 481524 0 - 608964 C e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I e aotNan1.NW_018507959v1 40466 12 - 3732694 I e cebCap1.NW_016107444v1 480997 12 - 6778120 I a score=312464.000000 s hg38.chr3_KI270779v1_alt 197747 32 + 205312 ---------agaataaTTACTCCGGAAGCCTAAAAATGATG s panTro5.chr3 200184090 32 + 202621043 ---------AGGATAATTACTCCGGAAGCCTAAAAATGATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141585 32 + 190779 ---------agaataaTTACTCCGGAAGCCTAAAAATGATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31165 32 - 189199 ---------agaataaTTACTCCGGAAGCCTAAAAATGATG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949149 32 + 123690457 ---------agaataaTTACTCAGGAAGCCTAAAAATGATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524090 32 + 204787373 ---------agaataaCTACTCAGGAGGCCTAAAAATGACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129390 32 + 192460366 ---------agaataaCTACTCAGGAGGCCTAAAAATGACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615605 32 + 19675229 ---------agaataaCTACTCAGGAGGCCTAAAAATGACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547743 32 + 16847902 ---------agaataaCTACTCAGGAGGCCTAAAAATGACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478615 32 - 91754291 ---------agaataaTTACTCAGGAGGCCTAAAAATGACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662817 32 - 1977891 ---------agaataaCTACTCAGGAGGCCTAAAAATGACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526535 32 + 7796314 ---------agaaTAATTACTCAGGAGGCCTAAAAATGATA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987931 32 - 74750902 ---------AGAATAATTACTCAGGTGGCCTAAAAATGAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505574 32 + 17725628 ---------GGAATAATTACTCAGGTGGCCTAAAAATGATG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481009 31 - 6778120 ---------AGAATAATTACTCAGGTGGCCTTAAAATGAT- i cebCap1.NW_016107444v1 I 12 C 0 s aotNan1.NW_018507959v1 40478 32 - 3732694 ---------AGAATAATTACTCAGGTGGCCTAAAAATGATG i aotNan1.NW_018507959v1 I 12 C 0 s otoGar3.GL873829 481524 13 - 608964 ----------------------------CTTAAAAGCGATG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29118012 41 + 31377067 CAACAGAAGGAGATAATGACTCAGGTGAGCTAAAAATGATG i canFam3.chr33 C 0 C 0 e mm10.chr16 65478260 14 - 98207768 I e dasNov3.JH569502 3953262 18 + 6579706 I a score=168491.000000 s hg38.chr3_KI270779v1_alt 197779 12 + 205312 GGTGGATTAA----AG s panTro5.chr3 200184122 12 + 202621043 GGTGGATTAA----AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141617 12 + 190779 GGTGGATTAA----AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31197 12 - 189199 GGTGGATTAA----AG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949181 12 + 123690457 GGTGGATTAA----AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524122 12 + 204787373 GGTAGATTAA----GG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129422 12 + 192460366 GGTGGATTAA----GG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615637 12 + 19675229 GGTGGATTAA----GG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547775 12 + 16847902 GGTGGATTAA----GG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478647 12 - 91754291 GGTGGATTAA----GG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662849 12 - 1977891 GGTGGATTAA----GG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526567 12 + 7796314 GGTGGATTAA----GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987963 12 - 74750902 GGTGGATTAA----GG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505606 12 + 17725628 GGTAGATTAA----GG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481040 12 - 6778120 GGCGGATTAA----GG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 40510 12 - 3732694 GGTGGATTAA----GG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 481537 16 - 608964 GGTGGATTAACTATGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29118053 12 + 31377067 GGTGGATTAA----GG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3953280 12 + 6579706 GGTGGGTTAA----GG i dasNov3.JH569502 I 18 C 0 e mm10.chr16 65478260 14 - 98207768 I a score=291589.000000 s hg38.chr3_KI270779v1_alt 197791 21 + 205312 ACTCTGCAGGTGGGTGGGGAA s panTro5.chr3 200184134 21 + 202621043 ACTCTGCAGGTGGGTGGGGAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141629 21 + 190779 ACTCTGCAGGTGGGTGGGGAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31209 21 - 189199 ACTCTGCAGGTGGGTGCGGAA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949193 21 + 123690457 ACTCTGCAGGTGGGTGGGGAA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524134 21 + 204787373 ACTCTGCAGGTGGGTGGGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129434 21 + 192460366 ACTCTGCAGGTGGGTGGGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615649 21 + 19675229 ACTCTGCAGGTGGGTGGGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547787 21 + 16847902 ACTCTGCAGGTGGGTGGGGAA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478659 21 - 91754291 ACTCTGCAGGTGGGTGGGGAA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662861 21 - 1977891 ACTCTGCAGGTGGGTGGGGAA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526579 21 + 7796314 ACTCTGCAGGTGGGTGGGGAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987975 21 - 74750902 ATCCTGCAGGTGGGTGGGAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505618 21 + 17725628 ATCCTATAGGTGGGTGGGGAA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481052 21 - 6778120 ACCCTGCAGGTGGGTGGGGAA i cebCap1.NW_016107444v1 C 0 I 331 s aotNan1.NW_018507959v1 40522 21 - 3732694 ATCCTGCAGGTGGGTGGGGAA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 481553 21 - 608964 ATTCTACAGATGAGCTGGGAA i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65478274 21 - 98207768 ACTTTGCACGGGGTTAGCAAG i mm10.chr16 I 14 C 0 s canFam3.chr33 29118065 19 + 31377067 --ACTGCAGGTGGGTTGAGGA i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3953292 21 + 6579706 ATTCTGCAGGTGGGGTGGGAA i dasNov3.JH569502 C 0 C 0 a score=13923.000000 s hg38.chr3_KI270779v1_alt 197812 1 + 205312 A s panTro5.chr3 200184155 1 + 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141650 1 + 190779 A i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31230 1 - 189199 A i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949214 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524155 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129455 1 + 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615670 1 + 19675229 A i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547808 1 + 16847902 A i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478680 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662882 1 - 1977891 A i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526600 1 + 7796314 A i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 987996 1 - 74750902 A i calJac3.chr17 C 0 I 493 s saiBol1.JH378146 505639 1 + 17725628 A i saiBol1.JH378146 C 0 I 22 s aotNan1.NW_018507959v1 40543 1 - 3732694 A i aotNan1.NW_018507959v1 C 0 I 1141 s otoGar3.GL873829 481574 1 - 608964 A i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65478295 1 - 98207768 A i mm10.chr16 C 0 I 1 s dasNov3.JH569502 3953313 1 + 6579706 A i dasNov3.JH569502 C 0 C 0 e canFam3.chr33 29118084 2 + 31377067 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I a score=2481118.000000 s hg38.chr3_KI270779v1_alt 197813 426 + 205312 -AGGTGGAGAACC--CCTTCCCATCCC---AGCTCTTTCCTGGGTGAGCT-CCCAGCTATGATCCAGGACCAACTGCCAGGCTTCTCATTTTGATACTGGACACT----------ATGCTTAGCCCA-GCGACTG------------TCCTGAAGAAAGTGATCCAGACAAAATTTGAA-----CAGAGAA--------------------------AGAAG---GCAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTGTTCCCCTTG---------CTCCCTGGGGAGAGGAGGCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGGG--------------------TCTGGTGAGCTCTGCTCCCCGGTG---TGCA--GGGGAGGCAGAATGCAGGCAGAGGAGCAGCCTGACAATGCGACGGACACATTACCACGTGGCCCTA-----------TGTGCC------------------------------------------------------CTCACGGGGTCACGAGCTAGTGGAATCTAAACATGGAGAGAGGATCATTTAGCAACA s panTro5.chr3 200184156 437 + 202621043 -AGGTGGAGACCC--CCTTCCCATCCC---AGCTCTCTCCTGGGTGAGCT-CCCAGCCATGATCCAGGACCAACTGCCAGGCTTCTCATTTTGATACTGGACACT----------ATGCTTAGCCTA-GTGACTA------------TCCTAAAGAAAGTGATCCAGACAAAATTTGAA-----CAGAGAA--------------------------AGAAG---GCAGTGAGATTAGTCC----------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTGTTCCCCTTG---------CTCCCTGGGGAGAGGAGCCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGGG--------------------TCTGGTGAGCTCTGCTCCCCGGTG---TGCA--GGGGAGACAGAATGCAGGCAGAGGAGCAGCCTGGCAATGCGACTGACACATTACCACGTGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCACACGCTCACAGGGTCACGAGCTAGTGGAATCTAAACATGGAGAGAGGATCATTTAGCAACA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 141651 437 + 190779 -AGGTGGAGACCC--CCTTCCCATCCC---AGCTCTCTCCTGGGTGAGCT-CCCAGCCATGATCCAGGACCAACTGCCAGGCTTCTCATTTTGATACTGGACACT----------ATGCTTAGCCTA-GTGACTA------------TCCTGAAGAAAGTGATCCAGACAAAATTTGAA-----CAGAGAA--------------------------AGAAG---GCAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTGTTCCCCTTG---------CTCCCTGGGGAGAGGAGCCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGGG--------------------TCTGGTGAGCTCTGCTCCCCGGTG---TGCA--GGGGAGACAGAATGCAGGCAGAGGAGCAGCCTGGCAATGCGACTGACACATTACCACGTGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCACACCCTCACAGGGTCACGAGCTAGTGGAATCTAAACATGGAGAGAGGATCATTTAGCAACA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31231 436 - 189199 -AGGTGGGGACCC--CCTTCCCATCCC---AGCTCTTTCCTGGGTGAGCT-CCCAGCCATGATCCAGGACCAACTGCCAGGCTTCTCATTTTGATACTGGACACT----------ATGCTTAGCCCA-GTGACTA------------TCCTGAAGAAAGTGATCCAGACAAAATTTGAA-----CAGAGAA--------------------------AGAAG---GCAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTGTTCCCCTTG---------CTCCCTGGGGAGAGGAGGCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGGG--------------------TCTGGTGAGCTCTGCTCCCCGGTG---TGCA--GGGGAGGCAGAATGCAGGCAGAGGAGCAGCCTGGCAATGCGACGGACACATTACCACGTGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCACCC-CTCACGGGGTCACGAGCTAGTGGAATCTAAACATGGAGAGAGGATCATTTAGCAACA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949215 438 + 123690457 -AGGTGGAGA-CC--CCTCCCCATCCC---AGCTCTTTCTTCGGTGAGCT-CCCAGCCATGATCCAGGACCAACTGCCAGGCCTCTCATTTTGATACTGGAAACT----------ATGCTTAGCCCAGGTGACTA------------TCCTAAAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA--------------------------AAAAG---GGAGGGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGCTCCTTTGTTCCCCTTG---------CTCCCTGGTGAGAGGAGCCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGGG--------------------TCTGGTGAGCTCTGCTCCCCCGTG---TGCA--GGAGAGACAGAATGCAGGGAGAGGGGCAGCCTGGCAATGCGACGGCCGCATTACCACGTGGCCCTG-----------TGTGCTGGGC-------------------------------------------CCACGCCCTCATGGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCATTTAGCAACA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524156 409 + 204787373 -AGGTGGAGGCCC--CCTCCCCATCCC---AGCTTGTTCCTGGGTGAGCT-CCCAGCCATGAAATAGGACCAATTGTCAGCCCTCTCATTTTTATCCTAGAAACT-----------------------GTGACTA------------TCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTG---------CTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGAG--------------------GCTGGTGAGCCC---------------------GGGGAGGCAGCATGCAGGCAGAGGGGCAGTCTGGCAACGTGACGGCCACATTACCACGGGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCATTTAGCAACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129456 409 + 192460366 -AGGTGGAGGCCC--CCTCCCCATCCC---AGCTTGTTCCTGGGTGAGCT-CCCAGCCATGAAACAGGACCAATTGTCAGCCCTCTCATTTTTATACTAGAAACT-----------------------GTGACTA------------TCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTG---------CTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGG----------CCAGGG----GACAGA---AGAGGAG--------------------GCTGGTGAGCCC---------------------GGGGAGGCAGCATGCAGGCAGAGGGGCAGTCTGGCAACGTGACGGCCACATTACCACGGGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCATTTAGCAACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 615671 409 + 19675229 -AGGTGGAGGCCC--CCTCCCCATCCC---AGCTTGTTCCTGGGTGAGCT-CCCAGCCATGAAACAGGACCAATTGTCAGCCCTCTCATTTTTATACTAGAAACT-----------------------GTGACTA------------TCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTG---------CTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGG----------CCAGGG----GACAGA---AGAGGAG--------------------GCTGGTGAGCCT---------------------GGGGAGGGAGCATGCAGGCAGAGGGGCAGTCTGGCAACGTGACGGCCACATTACCACGGGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCATTTAGCAACA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 547809 407 + 16847902 -AGGTGGAGGCCC--CCTCCCCATCCC---AGCTCGTTCCTGGGTGAGCT-CCCAGCCATGAAACAGGACCAGTTGTTAGGCCTCTCATTTTGATACTAGAAACT-----------------------GTGACTA------------TCCTACAGAAAGTGATCCAGACAAAATTTAAA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATCAGGCTGGAAAGTGAGACTTGCTCC-CTGTTCCCCTTG---------CTCCCTGGCGAGGGGAGTCACAAGCTGAAGC--CGG----------CCAGGG----GACAGA---AGAGGAG--------------------GCTGGTGAGCCT---------------------GGGGAGGCAGCATGCAGGCAGAGGGGCAGCCTGGCAACGTGACGGC--CATTACCACGGGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACACGGAGGGAGGAGCATTTAGCAACA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 478681 409 - 91754291 -AGGCGGAGGCCC--CCTCCCCATCCC---AGCTCGTTCCTGGGTGAGTT-CCCAGCCATGAAACAGGACCAATTGTCAGGCCTCTCATTTTGATACTAGAAGCT-----------------------GTGACTA------------TCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATCGGGCTGGAAAGCGAGACTTGCTCC-TTGTTCCCCTTG---------CTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGG----------CCAGGG----GACAGA---GGAGGAG--------------------GCTGGTGAGCCC---------------------GGGAAGGCAGCATGCAGGCAGAGGGGCAGTGTGGCGATGTGACGGCCACATTACCACGGGGCCCTG-----------TGTGCCAGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGCGGAATCTAGACATGGAGGGAGGAGCATTTAGCAACA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 662883 409 - 1977891 -AGGTGGAGGCCC--CCTCCCCATCCC---AGCTCGTTCCTGGGTGAGCT-CCCAGCCATGAAACAGGACCAGTTGTCAGCCCTCTCATTTTGATACTAGAAACC-----------------------GTGACTA------------TCCTACAGAAAGTGATCCAGACAAAATTTGGA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATTAGGCTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTG---------CTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGG----------CCGGGG----GACAGA---AGAGGAG--------------------GCTGGTGAGCCC---------------------GGGGAGGCAGCATGCAGGCAGAGGGGCAGCCTGGCAACGTGACGGCCACATTACCACGGGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACACGGAGGGAGGAGCATTTAGCAACA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 526601 420 + 7796314 -AGGTGAGACCCC--CCTCCCCATCCC---AGGTCGTTCCTGGGTGCGCT-CCCAGCCATGAAACAGGGCCAACTGTCAGGCCTCTCATTTTGATACCAGAAACC-----------------------GTGCTGAGCCCAGGTGACTTCCTACAG-AAGTGATCCAGACAACATTTGAA-----AAGAGAA--------------------------AAAAG---GGAGTGAGATTAGCCC----------ATTAGGCTGGAAAGTGAGACTTAGTCC-TTGTTCCCCTTG---------CTCCCTGGGGAGAGGAGTCACCAGCTGAAGC--TGG----------CCAGGG----GACAGA---AGAGGAG--------------------GCTGGTGAGCCC---------------------GGGGGGGCAGAATGCAGGCAGAGGGGCAGTCTGGCAATGTGACGGCCACATTATCACGTGGCCCTG-----------TGTGCCGGGC-------------------------------------------CCACGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCATTTAGCACCA i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 481576 402 - 608964 -AGGTGGAGTCCCTACCTCTCTTCCCCTCGAAGTCTTTCCTGGGTGAGCT-CCCAGCCATGATCCATGACTAACTGCCAGGTCTCTCATGTCAATACCTGAATATTCAATTTTTGATATTTATCCCAGGAGAATA------------TTCTAGAGCAAATGATCTAGAAGGATCTTGAA-----AGAGAAA--------------------------AGGAGGTAGGAGTGAGATTAGCCA----------GTTTAGCTGGG----GAGACTCATTCC-TTCTTGCCCCTG---------CTCCCTGGGGAAAGGG---ATCAACTAAAGC--TGG-----------------------AGG---AGAAGGC--------------------CCTGCT--CCCCTGGGACACAGTG---------GAGGCAGCAGAACTTAGACAGAGGGGCAGCCTGGCAATACAACAACTAAATTACTACACAAACCTG-----------TGTGCCAGG---------------------------------------------------------------------------ATCTAGATGTGGAGTGGGGAATATTTAATGACA i otoGar3.GL873829 I 1 I 131 s mm10.chr16 65478297 476 - 98207768 -AGGTGGAGTCCA--CCAA-----------GAGTCCTTCCTGGGTGAACT-TTCAGCCATAATGCATGACCAAATACCAGGCATCTCGACTGAATACCTTAGCCT--------CGATCCTTAGTCAG-GTGAAGA------------TTCTAGAGAAAATGATGCAAAAGTAATCTGAA-----GAGGGAACAA----------GGAGACATAGAGCAGAAG---GCAATGGAAGTGGTCT----------GACA-GCTAGGGAGTGAGGCTTGCTCT-TC-------------------CTCCACACAGAGAGACAG-ACTGGCTGACCCAGAGG----------CCAAAGCGACAGCAGA---AGCAGAG--------------------TCAGGGGGTCTT------AGCAAG---TACA--TTAGAAGCAGAACTTAGACAGAGG-TCAGCCTGGCAACCCAACAGCCG-GTAACTGCCCAGCCCCA-----------GGTCCCAGGCACCATGTCTAGTGCAGAGACTGATGAAAGGGACAAGAAGAAGACCTTGCATTGCCAGGGTCACTGTCTAGGGGAAGCTAGGAAAGAAGGGAGGGACATGTATGGAGA i mm10.chr16 I 1 I 7 s canFam3.chr33 29118086 497 + 31377067 -AGGTGGAGTCCC--T-------TAAG---GAGGCCTTCCTGGGTGGGCT-CCCAGCCCTGATCCATGACCAACTGCCACACTTCTCATTTGAATATCTGAGGTT--------TGATACATAGCCCAGGAGGCGA------------TTCTAGGGAAAGTGATTCAGAAGGAATTGGAATTAGCCAGGGGG-------------------TCAAAGCAAAAG---AAAATGGAAATGGTCC-AGAGACACAATCTAGCTG---AGCGAGG-----TCC-GTGCTCTCCTAGGGCAATGAACTACGTAACACGGAAGGCCACG---CGGAGC--AAG-------------AGG----AGCAGAACCAGGGAGC--------------------CCCAGCAAGCCCTGCTCCCCAGCA---TACAATGGAGCAACAGAACCCGGACGGAGCACTAGCCTGGCCCtccaacagccgatttaccctgtgagcttg-----------tgtgccgggcactgtgcctggcccaggggatgctgagatgagcaaggccctgcccctgtcctcacacagtcacattctagACGGATCTAGACCTGGGTGGAGGGGCATTTGGGGGCA i canFam3.chr33 I 2 I 8 s dasNov3.JH569502 3953314 506 + 6579706 CAAGGGGCGTCCC--TC-------CAG---GACGTCTCCCTGGGTGGGAGATTCAGCCGTGACCCAGGACCAGCAGCCACACCGCTCATTTGAACACCTGAATTT------------------TCTC-TAGAAAA------------TTCTAGAGAAAGTGATTCCAAAGGAATT-GAA-----AAGAGAAAAGCCACTTAGCCGGAAGGTTAGGGCATAAG---GAAATAGAAACGATCCTAGAGGCAA-ACTCAGCTGGG-GGTGAAGCTCCCTCC-TTCCTCCCCCTG---------GACCCCGGAGAGAGGA---TCCAGCTGAAAC--TGGAGGAGGAAGTCAAGGA----GATGGA---AGAGAAACAGAGTCAACACCACTGAGTCCCAGCGGGCCCTGCTGCCCTGGTCACCGCG--TGGGTGACACAGCACAGGTGGGGGGTCGGCacag----------------ttcctgcgagaacctgcgagccatttctgtgtctggcacaggggatgctgagatgaaagccctgg---------------ccctgacctcacagggtcacaatccagagggCTCTAGA----ACAGGAAGGGCCTTTAATGGCA i dasNov3.JH569502 C 0 I 8 e aotNan1.NW_018507959v1 40544 1141 - 3732694 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I e calJac3.chr17 987997 493 - 74750902 I e saiBol1.JH378146 505640 22 + 17725628 I a score=547146.000000 s hg38.chr3_KI270779v1_alt 198239 73 + 205312 GGGTCTGTGGCCCTGG-G-C-ATGACTGTGTGCCAGGCAACAGACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCT s panTro5.chr3 200184593 73 + 202621043 GGGTCTGTGGCCCTGG-G-C-ATGACTGTGTGCCGGGCAACAGACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142088 73 + 190779 GGGTCTGTGGCCCTGG-G-C-ATGACTGTGTGCCGGGCAACAGACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31667 73 - 189199 GGGTCTGTGGCCCTGG-G-C-ATGACTGTGTGCCGGGCAACAGACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949653 69 + 123690457 GGGTCTGTGGCCCTGG-G-C-ATGACTGCATGCTGGGCA----ACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524565 73 + 204787373 GGGTCTGTGGTCCCGG-G-C-ATGGGTGTGTGCTGGGCAACAGGCGAGCCTCAGTGAGGGCCACCCGGGAAGGCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129865 73 + 192460366 GGGTCTGTGGTCCCGG-G-C-ATGGGTGTGTGCTGGGCAACAGGCGAGCCTCAGTGAGGGCCACCCGGGAAGGCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616080 73 + 19675229 GGGTCTGTGGTCCCGG-G-C-ATGAGTGTGTGCTGGGCAACAGGCAAGCCTCAGTGAGGGCCACCCAGGAAGGCCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548216 73 + 16847902 GGGTCTGTGGTCCCGG-G-C-ATGGGTGTGTGCTGGGCAACTGGCAAGCCTCAGTGAGGGCCACCCAGGAAGGCCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479090 73 - 91754291 GGGTCTGTGGTCCCGG-G-C-ATGGGTGTGTGCTGGGCAACTGGCAAGCCTCAGTGAGGGCCACCCAGAAAGGCCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663292 73 - 1977891 GGGTCTGTGGCCCCGG-G-C-ATGGGTGTGTGCTGGGCAACAGGCAAGCCTCAGTGAGGGCCACCCAGGAAGGCCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527021 73 + 7796314 GGGTCTGTGGTCCTGG-G-C-ATGGGTGTGTGCTGGGCAACTGGCAAGCCTCAGTGAGGGCCATCCAGGAAGGCCT i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 482109 72 - 608964 GGGTCTATGGCCCTGA-GCC-ATGGCTGTGTGCTGGACAATGGGGAAGGCTTGATGAGAGC--TCTAAGATGGTCT i otoGar3.GL873829 I 131 C 0 s mm10.chr16 65478780 71 - 98207768 GGGTCTGTGACTTTAATG-A-GTGCTTGTTTGCTGAGCA-TGGAGGAAGATCAATAAAGGTGGGTCA--AAGGCCT i mm10.chr16 I 7 C 0 s canFam3.chr33 29118591 74 + 31377067 GGGTCTGTGGCCCTGA-G-CTCTGGGGGGGAGTTGGGCAATGGAGGAAGCTCACTGAGGGCCATCGAAGAGGATCT i canFam3.chr33 I 8 C 0 s dasNov3.JH569502 3953828 74 + 6579706 GGGTCTGTGGCCCCGGGG-C-GCAGGTGTGTGTTGGGCAATGGGGGAGGCTCACTGAGGGCGACCGAAGATCGCCT i dasNov3.JH569502 I 8 I 52 e aotNan1.NW_018507959v1 40544 1141 - 3732694 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I e calJac3.chr17 987997 493 - 74750902 I e saiBol1.JH378146 505640 22 + 17725628 I a score=1169135.000000 s hg38.chr3_KI270779v1_alt 198312 190 + 205312 CTGCCTTAGTGC-----------------------Tc-------acaaactcggtggcttcaaacaaacaggaatttattctttcacagtt-tggaacccagaagtccaaaatcaaggcgtgggcagaaccacactccctccggaggttct-ggggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccgggctg s panTro5.chr3 200184666 190 + 202621043 CTGCCTTAGTGC-----------------------Tc-------acaaacttggtggcttcaaacaaacaggaatttattcttttacagtt-tggaacccaggagtccaaaatcaaggcgtgggcaaaaccacactctctccagaggttct-taggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccaggctg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142161 190 + 190779 CTGCCTTAGTGC-----------------------Tc-------acaaacttggtggcttcaaacaaacaggaatttattcttttacagtt-tggaacccaggagtccaaaatcaaggcgtgggcaaaaccacactctctctggaggttct-taggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccaggctg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31740 190 - 189199 CTGCCTTAGTGC-----------------------Tc-------acaaactcggtggcttcaaacaaacaggaatttattcttttacagtt-cggaacccagaagtccaaaatcaaggcgtgggcagaactacactccctccggaggttct-ggggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccgggctg i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949722 188 + 123690457 CAGCCTTAGTGT-----------------------Tc-------acaaacttggtgacttcaaacaaacaggaatttattctttcacagtt-tggaacccagaagtccaaaatcaaggcgtgggcagaaccacactccctccgggggttct---ggtggagcccccctggcctctctcctggtttccaggggcggctggccgctctccacattcccgggctg i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524638 190 + 204787373 CCGTCTTAGTGT-----------------------cc-------acaaacttggcagcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaagtccaaaatcaaggcatgggcagaaccacactccgtccggaggttct-ggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccgcattcccgggctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 129938 190 + 192460366 CCGTCTTAGTGT-----------------------cc-------acaaacttggcagcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaagtccaaaatcaaggcatgggcagaaccacactccgtccggaggttct-ggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccgcattcccgggctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616153 190 + 19675229 CCGTCTTAGTGT-----------------------cc-------acaaacttggcagcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaagtccaaaatcaaggcatgggcagaaccacactccgtccggaggttct-ggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccgcattcccgggctg i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548289 190 + 16847902 CCGTCTTAGTGT-----------------------cc-------acaaacttggcggcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaagtccaaaatcaaggcatgggcagaaccacactccgtcccgaggttcc-ggggtggagccgtcctggcctgtctcctggtttccgggggtggctggccatgctccgcattcccgggctg i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479163 189 - 91754291 CTGCCTTAGTGT-----------------------cc-------acacacttggtggcttcaaacaaagcggaatttattctttcacagtt-tggaacccagaagtccaagatcaaggcacgggcagaaccacactccgtccgg-ggttct-ggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccacattccggggctg i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663365 190 - 1977891 CCGTCTTAGTGT-----------------------cc-------acaaacttggcggcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaagtccaaaatcaaggcatgggcagaacaacactccgtccggaggttcc-ggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccgcattcccgggctg i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527094 189 + 7796314 CTGTCTTCGTGT-----------------------cc-------acaaacttggtggcttcaaacaaaccggaatttattcttttacagtt-tggaacccagaagtccaaaatcaaggcatgggcagaaccacactccgtccggaggtgct-ggggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccgggc-g i colAng1.NW_012118932v1 C 0 C 0 s otoGar3.GL873829 482181 213 - 608964 Ctgtcttagtttcccagaactgctatgacacagaacc-------acaaagttggtggcttaaaac-aatagaaatgtgttctctcacagttctggagaccagaagtctgaaatcaaggtgttagtagaaccatgcttcctccaaagtctatagaggtggagccctgcctgcctccctcctag-ctctggtggtggcagaccatccttggcacaccttggctt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65478851 105 - 98207768 CTGTATGAGCTT-----------------------CCCCGTGTAacagatttggcagcttcaagc-cacagaaagctgttctctcacagttaggggaacataaggtcaaaaatc--------------------------------------agggtg------------------------------------------------------tcccaggcc- i mm10.chr16 C 0 C 0 s canFam3.chr33 29118665 207 + 31377067 CAgtatcagtgtcctacggctgctgtaacaaagcacc-------acaaactaggtggcttaaagc-aacacagttgtattctctcacaattctggaggccagaagtcctaaatcaaagcgctgatgggaacatcctccctccaaatctcta-ggggagaatccttctttgcct--cttctag---ctggtggttgctgg-catcctcggtgttccttagcct i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3953902 52 + 6579706 I e aotNan1.NW_018507959v1 40544 1141 - 3732694 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I e calJac3.chr17 987997 493 - 74750902 I e saiBol1.JH378146 505640 22 + 17725628 I a score=166390.000000 s hg38.chr3_KI270779v1_alt 198502 28 + 205312 gcagccgtgtccctccagcctctgcctc s panTro5.chr3 200184856 28 + 202621043 gcagctgtgtccctccagcctctgcctc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142351 28 + 190779 gcagctgtgtccctccagcctctgcctc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31930 28 - 189199 gcagccatgtccctccagcctctgcctc i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949910 28 + 123690457 gcagccgtgtccctccagcctctgcctc i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524828 28 + 204787373 gcagccgtgtctctgcagcctctgcctc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130128 28 + 192460366 gcagccgtgtctctgcagcctctgcctc i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616343 28 + 19675229 gcagccgtgtctctgcagcctctgcttc i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548479 28 + 16847902 gcagccgtgtctctgcagcctctgcctc i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479352 28 - 91754291 gcagccgtgtctgtgcagcctctgcctc i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663555 28 - 1977891 gcagccgtgtctctgcagcctctgcctc i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527283 28 + 7796314 gcagccgtgtctctgcagcctctgcctc i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988490 22 - 74750902 GTGGCCGTCTCC------Cctctgcctc i calJac3.chr17 I 493 C 0 s otoGar3.GL873829 482394 28 - 608964 gcagctgcagcactcacatacccatctt i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65478956 20 - 98207768 -catctttgcccctatagctt------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29118872 18 + 31377067 gcagctttcgtcctccca---------- i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3953902 52 + 6579706 I e aotNan1.NW_018507959v1 40544 1141 - 3732694 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I e saiBol1.JH378146 505640 22 + 17725628 I a score=1124411.000000 s hg38.chr3_KI270779v1_alt 198530 155 + 205312 catcgtgttgtgtggccatcttct---cccc-tgtgcgtgtgtctctgtttcctcttctcataaggacac------cagtcactggattaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataag s panTro5.chr3 200184884 155 + 202621043 catcgtgttgtgtggccatcttct---cccc-tgtgcatgtgtctctgtttcctcttctcataaggacac------cagtcactggattaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataag i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142379 155 + 190779 catcgtgttgtgtggccatcttct---cccc-tgtgcatgtgtctctgtttcctcttctcataaggacac------cagtcactggattaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataag i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 31958 155 - 189199 catggtgttgtgtggccatcttct---cccc-tgtgcgtgtgtctctgtttcctcttctcataaggacac------cactcactggattaggctctgcctcaattcagcatgacctcagtttaacttaactaataacctt----tgcaaagaccctatttccaaataag i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120949938 155 + 123690457 catcgtgctgcgtggccgtcgtct---cccc-cgtgtgtgtgtctctgtttcctcttctcataaggacac------cagtcactggatcaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataag i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202524856 153 + 204787373 catcgtgtcacgaggccgtcttct---cccc-tgtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaataag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130156 153 + 192460366 catcgtgtcgcgaggccgtcttct---cccc-tgtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaataag i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616371 152 + 19675229 catcgtgtcgcgaggccgtcttct---cccc--gtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaaaaag i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548507 153 + 16847902 catcgtgtcgcgaggccatcttct---cccc-tgtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaataag i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479380 153 - 91754291 catcgtgttgcgaggccatcttct---cccc-tgtgcgtgtc--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactggggatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttcaaaataag i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663583 153 - 1977891 catcgtgtcgcgaggccatcttct---cccc-tgtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaataag i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527311 153 + 7796314 cgtcgtgttgcgtggccatcttct---cccc-tgtgcgtgtc--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaatcatctc----tgcaaagaccctacttccaaataag i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988512 108 - 74750902 catcatgttttgtggc---catct---cccc-tgtgcgagtgtctccgtcttctctt---ataaggatgc------cagtcaccggattaggctctg----------------cctcagtttaactgaactaataacctc----------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505662 108 + 17725628 CATCACGTCGCGTGGC---CTTCT---CCCC-TGTGGGAGTGTCTCCGTCTTCTCTT---ACAAGGATGC------CAGTCACTGGATTAGGCTCTG----------------CCTCAGTTTAACTGAACTAATAACCTC----------------------------- i saiBol1.JH378146 I 22 C 0 s otoGar3.GL873829 482422 130 - 608964 --------cacgtgcccatatttt---ccctgtgtgtctctgtctccattttct-ttgtcataaggacac------caatcattgaatc----------------cagtataatc-aagtttaacttgattaataacaac----tgtgaagaccttacttccaaatgag i otoGar3.GL873829 C 0 I 3009 s mm10.chr16 65478976 151 - 98207768 --ttgggacatgcagcagtccttgatactcc-tacacttacccctctgatctcttttttcactgtcacatgtcacatggtcactgggccagggtccaccctcatc--------tatcagtctgacataaccaataacatc----ttctaagac---atttccaaataaa i mm10.chr16 C 0 C 0 s canFam3.chr33 29118890 147 + 31377067 ------------tggccatcttct---cctc-caggcatctgtgtctgttcactcttcttataaggacac------gagtcattggagtagagcccatgccaagccagcgtgatctccatttaacacaactgatcatatcttcattcaaagaatctgtctctaggtaag i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3953902 52 + 6579706 I e aotNan1.NW_018507959v1 40544 1141 - 3732694 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I a score=31636.000000 s hg38.chr3_KI270779v1_alt 198685 7 + 205312 gtcacat------ s panTro5.chr3 200185039 7 + 202621043 gtcacat------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142534 7 + 190779 gtcacat------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 32113 7 - 189199 gtcacat------ i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120950093 7 + 123690457 gtcacgt------ i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202525009 7 + 204787373 gtcacat------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130309 7 + 192460366 gtcacat------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616523 7 + 19675229 gtcacat------ i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548660 7 + 16847902 gtcacgt------ i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479533 7 - 91754291 gtcatgt------ i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663736 7 - 1977891 gtcacgt------ i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527464 7 + 7796314 gccacgt------ i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988620 6 - 74750902 ATCATG------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505770 6 + 17725628 ATCATG------- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65479127 7 - 98207768 tccacat------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29119037 13 + 31377067 gtcacaacgaggt i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 482552 3009 - 608964 I e dasNov3.JH569502 3953902 52 + 6579706 I e aotNan1.NW_018507959v1 40544 1141 - 3732694 I e cebCap1.NW_016107444v1 481073 331 - 6778120 I a score=943734.000000 s hg38.chr3_KI270779v1_alt 198692 84 + 205312 tctgagtgacatgaattttg-ggggacacgtactcaccccagtacaACCTCCTTGAAGAAAATTTGGGGCAGGGTAGGTGTATGG s panTro5.chr3 200185046 84 + 202621043 tctgagtgacatgaattttg-ggggacacgtactcaccccaGTACAACCTCCTTGAAGAAAATTTGGGGCAGGGTAGGTGTATGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142541 84 + 190779 tctgagtgacatgaattttg-ggggacacgtactcaccccaGTACAACCTCCTTGAAGAAAATTTGGGGCAGGGTAGGTGTATGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 32120 84 - 189199 tctgagtgacatgaattttg-ggggacaagtactcaccccaGTACAACCTCCTTGAAGAAAATTTGGGGCAGGGTAGGTGTATGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120950100 84 + 123690457 tctgagtgacatgaatttag-ggggacacgtattcaccccaGTACGACCTCCTTGAAGACAATTTGGGACAGGGTAGGTGTATGG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202525016 84 + 204787373 tctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCCGGTGTGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130316 84 + 192460366 tctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCCGGTGTGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616530 84 + 19675229 tctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCCGGTGTGTGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548667 84 + 16847902 tctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCAGGTGTACAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479540 84 - 91754291 tctgagtgacatgaattttg-ggggacacatattcaccccagtacaACCTCCCTGAAGAAAATTTGGGGCAGGGTAGGTGTACGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663743 84 - 1977891 tctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAAGGCAGGTATACAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527471 84 + 7796314 tctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTAGGGCAGGGTAGGCGTATGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988626 84 - 74750902 TCTGAGGGACATGAATCTTG-GGGGACAATTATTCACCCCAGCACAACCTCCTTGAAGAAAATTTGGGGAAGGGTAGGTGTATGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505776 84 + 17725628 TCTGAGGGACGTGAATCTTG-GGGGACACTTATTCACCCCAGTACAACCTCCTTGAAGAAAATTTGGGGAAGGGTAGGTGTATGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481404 84 - 6778120 tctgAGGGACATGAATCTTG-GGGGACACTTATTCACCCCAGTACAACCTCCTTGAAGAAAATTTGGGGAAGGGTAGGTGTATGG i cebCap1.NW_016107444v1 I 331 C 0 s aotNan1.NW_018507959v1 41685 84 - 3732694 TCTGAGGGACATGAATCTTG-AGGGACACTTACTCACCCCAGTACAACCTCCTTGAAGAAAATTTGGGGAAGGGTAGGTGTATGG i aotNan1.NW_018507959v1 I 1141 C 0 s mm10.chr16 65479134 75 - 98207768 tctgag--------actcta-ggTGACATTCTGGGAGTCTAGTACAAACCCCTTAAATA-AACTTGGGGAAGAATAAATGTTTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 29119050 82 + 31377067 tcttggtgacatggattttgcggggacacttatccaacccaGTATAACCGC--TGAAGAAAGTTTGGGA-AGGGTAAATGTACGA i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 482552 3009 - 608964 I e dasNov3.JH569502 3953902 52 + 6579706 I a score=1110812.000000 s hg38.chr3_KI270779v1_alt 198776 104 + 205312 GTCATGACA-------------ATAGATGAT----------------TCTTGCCGA---ATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACATCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGG s panTro5.chr3 200185130 104 + 202621043 GTCATGACA-------------ATAGAAGAT----------------TCTTGCCGA---ATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACATCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142625 104 + 190779 GTCATGACA-------------ATAGAAGAT----------------TCTTGCCGA---ATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACATCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 32204 104 - 189199 GTCATGACA-------------ATAGATGAT----------------TCTTGCTGA---ATGATGACCTATTCGG---GAAGACCAGCAGGTGTGCCCACATCACCCTGGGCTGGCTCTGGAAATCTCCCAAATCTCGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120950184 103 + 123690457 GTCATGATA-------------ATGGATGAT----------------TCTTGCCGA---ATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCGT-G i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202525100 104 + 204787373 GTCATTACA-------------ATAGATTAT----------------TCTTGCCGA---ATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130400 104 + 192460366 GTCATTACA-------------ATAGATTAT----------------TCTTGCCGA---ATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCCGGGCTGGCTCTGGAAATCCCCCAAATCTCGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616614 104 + 19675229 GTCATTACA-------------ATAGATTAT----------------TCTTGCCGA---ATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548751 104 + 16847902 GTCATTACA-------------ATAGATTAT----------------TCTTGCCGA---ATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAGATCTCGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479624 104 - 91754291 GTCATTACA-------------GTAGATTAT----------------TCTTGCCTA---AAAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663827 104 - 1977891 GTCATTACA-------------ATAGATTAT----------------TCTTGCTGA---ATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAGACCTCGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527555 104 + 7796314 GTCATTACA-------------ATAGATTAT----------------TCTTGCCGA---ATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCAAGTCACCCCGGGCTGGCTCTGGAAATCCCCCACATCTGGG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988710 103 - 74750902 GTCATTACA-------------ATAGATGCT----------------TCTTGCCGA---ATGATGACCCATTTGA---GAAAACCAGCAGGTGTACCCATGTCACCCTGGGCTGGC-CTGGAAATGCCCCAAATCTCTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505860 103 + 17725628 GTCATTACA-------------ACAGATGCT----------------TCTTGCCGA---ATGATGACCCACTTGA---GAGGACCAGCAGGTGAGCCCATGTCGCCCTGGGCTGGC-CTGGAAATGCCCCAAATCTCTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481488 103 - 6778120 GTCATTACA-------------ATAGATGCT----------------TCTTGCCGA---ATGATGACCCGTTTGA---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGC-CTGGAAATGCCCCAAATCTCTG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 41769 103 - 3732694 GTCGTTACA-------------ATAGAAGCT----------------TCTTGCCGAATGATGATGACACATTTGA---GAAGACCCGCAGGTGTGCCCCTGTCACCCTGGGCTGGC-CTG---ATGCCCCAAATCTCTG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 485561 104 - 608964 GTCATTATG-------------ATGAGTTAT----------------TCTCTCTGA---ATAATGAGCTATGTGG---GAAGACCAGCAGGGGAGCCCATGTCACTCTGGACTGGTCTTGAAAATCTCCCAAATAGCCG i otoGar3.GL873829 I 3009 C 0 s mm10.chr16 65479209 121 - 98207768 GTCATTACATGGAAGTTGTGGGAGGGATCATTTGCCTACTACAGTGCTCTAGCTGA---TTAGTGATCTTACAGGAGTGCATGCCAGCAAGTG-ACTCATTTCATCCTGGGCTGGTCCTGGAAAT-------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29119132 83 + 31377067 GTCGTTCCA-------------ATAGATGAC----------------CTCCACAGG----------------------GAGGCCCAGCAGGTGAGC-CACTTCACCCTGG-CTGGC-CTGGAAGT--CCCAAACCCCTG i canFam3.chr33 C 0 C 0 e dasNov3.JH569502 3953902 52 + 6579706 I a score=1595582.000000 s hg38.chr3_KI270779v1_alt 198880 171 + 205312 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCGGCATGACCAAGGG---------ACCAGCTTGACT--ATTCCTCGATCTAACTTCTT-GGATCATGAGGCCAGGCAGATGGCAGCCCCAGGAGCCCTCAGCTGTA----GCTCATCAGGCCCGTGCTGAGACCACC-------CCCTCCCCTGCCCAG----------GAGGGC s panTro5.chr3 200185234 171 + 202621043 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCGGCATGACCAAGGG---------ACCAGCTTGACT--GTTCCTCGATCTAACTTCTT-GGGTCATGAGGCCAGGCAGATGGCAGCCCCAGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACC-------CCCTCCCCTGCCCAG----------GAGGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142729 171 + 190779 CTCTTCTCACCACTGAGTCA-GGAGCCAGGCGGCATGACCAAGGG---------ACCAGCTTGACT--ATTCCTCGATCTAACTTCTT-GGGTCATGAGGCCAGGCAGATGGCAGCCCCAGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACC-------CCCTCCCCTGCCCAG----------GAGGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 32308 171 - 189199 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCGGCATGACCAAGGG---------ACCAGCTTGACT--ATTCCTCGATCTAACTTCTT-GGGTCATGAGGCCAGGCAGATGGCAGCCCCAGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACC-------CCCTCCCCTGCCCAG----------GAGGGC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120950287 171 + 123690457 CTCTTGTCAGCACTGAGTCC-AGGGCCAGGCTGCGTGACCAAGCG---------ACCAGCTTCACT--ATCCCTTGATCTAACTTCTT-GGGTCATGAGGCCGGGCAGATGGCAGCCCCGGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACC-------CCCTCCCCTGCCCAG----------GAGGGC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202525204 161 + 204787373 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG---------ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGACCACCCCACCCCCCCACCCCCGCCCAG----------GAGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130504 161 + 192460366 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG---------ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGATCACCCCACCCCCCCACCCCCGCCCAG----------GAGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616718 161 + 19675229 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGTGTGACTGAGCG---------ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGACCACCCCACCCCCCCACCCCCGCCCAG----------GAGGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 548855 149 + 16847902 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG---------ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGA------------CACTCCCCCCCCCAG----------GAAGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479728 154 - 91754291 CTCTTGTCACCACTGAGTCC-GGAGCCAGGCTGCGTGACCGAGCC---------ATCAGCTTGGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCGCATCAGGCCCATGTTGAGACCACC-------CCCTCCCCTGCCCAG----------GAGGGC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 663931 153 - 1977891 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG---------ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGACCACC-------CCCACCCC-GCCCAG----------GAGGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527659 171 + 7796314 CTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTAGGCG---------ATCAGCTTGACT--ATCTCTCGATCTAACTTCCT-GGGTCATGAGGCCGGGCAGATGGCAGCCCCAGGAGCCCCCAGCTGTA----GCTCATCAAGCCCATGTTGAGACTATC-------CCCTCCCCTGCCCAG----------GAGGGC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988813 169 - 74750902 CTCTCGTCACCACTGAGTCA-GGAGCCAGGCTGTGTGACCAAGGG---------ACCAGCTTGACT--ATCCCTCAATCTAACTCCCT-AGGTCATGAAGCCGGGCAGATGGCAGCCTCAGGAGCCCCCAGCTGTG----CCTCATCAGGCCCATGTTAAGACCAC--------TGCTCCCCTGCCTA-----------GAGGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 505963 168 + 17725628 CTCTCGTC-CCACTGAGTCA-GGAGCCAGGCTGTGTGACCAAGGG---------ACCAGCTTGACT--ATCCCTCAATCTAACTCTCT-AGGTCATGAAGCTGGGCAGATGGCAGCCTCAGGAGCCCCCAGCTGCG----CCTCATCAGGCCCACGTTGAGACCAC--------AGCTCCTCTGCCCA-----------CAGGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481591 169 - 6778120 CTCTCGTCCCCACTGAGTCA-GGAGCCAGGCTGTGTGACCAAGGG---------ACCAGCTTGACT--ATCCCTCAATCTAACTTCCT-AGGTCATGAAGCTGGGCAGATGGCAGCCTCAGGAGCCCCCAGCCATG----CCTCATCAGGCCCACGTTGAGACCAC--------CGCTCCCCTGCCCA-----------GAGGGC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 41872 169 - 3732694 ATCTCGTCACCACTGAGTCA-GGAGCCAGGCTGTGTGACCAAGGG---------ACCAGCTTGACT--ATCCCTCAATCTAACTCCCT-AGGTCACGAAGCCGGGCAGATGGCAGCCTCAGGAGCCCCCAGCCGTG----CTTTATCAGGCCCATGTTGAGACCAC--------CGCTCCCCCGCCCA-----------GAGGGC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 485665 190 - 608964 CCATCATCAACCTTCCATCA-CCAGCCAGGCTGCCAGACTGGGTGTCAAAGGGAACCAGCTGGATT-AATCCCTTGATCTAACTTC-T-GGAGCATGGAGCTGGGCAGACAGCAGCCCTAGGACCCTCTAGGAGTG----TCCCATCAGGTCTATGCTAAGACCTGC-------GCCCCCAGAGCTGAGGACAAGGGATGAAAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65479330 162 - 98207768 ----------CAAGGAGTCA-CAAGCCAGGCTGGGTACCCAAGAG--------AAACAGCCAGTTA--ATTCCTAACCAGATTTCCTT-AGGGCTTGAAATCTGGCAGGCAGCTGTTCTGGAA--TTCTAGCCTTACAGGCCTCATCA-GCCCATGCTGAGAGCCC--------CCATCCTGTGTCCAA----------GAGGGC i mm10.chr16 C 0 I 494 s canFam3.chr33 29119215 157 + 31377067 CCTCGGTCACTACTGAGCTATGAAGCCAGTCGGGGTGACCAAAGG--------AAACGTCTGTACTCGATCCCTTGGTCAAACTTCCCAGGGGTGGGAGGCTGGGCAGGCAGCAGACCCAGGAGCTCCCCACCCTG----TCTCCTTA--------------------------TGTCCCGCTGCCCAG----------GAGGGC i canFam3.chr33 C 0 I 5 s dasNov3.JH569502 3953954 145 + 6579706 CCCTGAGCACCGCTGGGTCC-TGAGGCAGGCTGGGGGACCAAGGG--------AAACTGGTAGACC--ACCCGTCGATGGACTTCCCA-GGGGCAGGAG---------------------------CCCAGCCCTG----CCTCGTCAAGTACCCGTCCAGACCACC-------CCCTGCAGCGCTCAG----------GAGGGC i dasNov3.JH569502 I 52 I 20 a score=1808351.000000 s hg38.chr3_KI270779v1_alt 199051 168 + 205312 AGAAA-------AGCAGGG------CCCAGGCAG-------------------------------------CAGTGGCCACACCTGCCTCA----------GT-----GGTTTCAGCCC---------TGCTCTCTCAAAGGTTGAC-----CTGCTA---TTG----ACTGGAAGGTATCACATTCCCTTGTTTCCTTCTGTAACCAGAGAAGAAGGTAAGGGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA s panTro5.chr3 200185405 168 + 202621043 AGAAA-------AGCAGGG------CCCAGGCAG-------------------------------------CAGTGGCCACACCTGCCTCA----------GT-----GGTTTCAGCCC---------TACTCTCTCAAAGGTTGAC-----CTGCTA---TTG----ACTGGAAGGTATCACATTCCCTCGTTTCCTTCTGTAACCAGAGAAGAAGGTAAGGAGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 142900 168 + 190779 AGAAA-------AGCAGGG------CCCAGGCAG-------------------------------------CAGTGGCCACACCTGCCTCA----------GT-----GGTTTCAGCCC---------TACTCTCTCAAAGGTTGAC-----CTGCTA---TTG----ACTGGAAGGTATCACATTCCCTCGTTTCCTTCTGTAACCAGAGAAGAAGGTAAGGGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 32479 167 - 189199 AGAAG-------AGCAGGG------CCCAGGCAG-------------------------------------CAGTGGCCACACCTGCCTCA----------GT-----GGTTTCAGCCC---------TACTCTCTCAAAGGTTGAC-----CTGCTA---TTG----ACTGGAAGGTATCACATTCCCTCGTTTCCTTCTGTAACCAGAGAAGAAGGTAAGGGGTAAGGGT-GGAGAGGGGA-GAGAGACAGGA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120950458 161 + 123690457 AGAAG-------AGCAGGG------CCCAGGCAG-------------------------------------CACTGGCCACACCAGCCTCC----------GT-----GGTTTCAGCCC---------TCCTCTCTCAAAGGTGGAC-----CTGCTA---TGG----ACTGGAAGGTAGCACATTCCCTCGTTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202525365 161 + 204787373 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTA---TTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTACCCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130665 161 + 192460366 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CTGCTA---TTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTACCCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 616879 161 + 19675229 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTA---TTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTACCCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549004 161 + 16847902 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTA---TTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 479882 161 - 91754291 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------AC-----GATCTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTA---TTG----ACTGGAAGGTATCACCTTCCCTCATTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GACAGACCGGA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 664084 161 - 1977891 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAT-----CCGCTA---TTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527830 161 + 7796314 AGAAG-------AGCAGGG------CCCAGGTGG-------------------------------------TGCTGGCCACACCTGCCTCC----------AT-----GACTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTA---TTG----ACTGGAAGGTATCACATTCCCTCATTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GAGAGACAGGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 988982 161 - 74750902 AGAAG-------ATCAGGT------CCCAGGCGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATCTCAGCCC---------TGCACTCTTGAAGGTGAAC-----TTGCTA---CTG----ACTGGAAGGCGTCACACTCCCTAGTTTCCTTCTGTAAACAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GGGAGAGAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 506131 161 + 17725628 AGGAG-------ATCAGGT------CCCAGGCAG-------------------------------------TGCTGGCCACACCTGCCTCC----------AT-----GATCTCAGCCC---------TGCTCTCTTAAAGGTGAAC-----TTGCTA---CCG----ACTGGAAGACATCACACTCCCTAGTTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGGGGGGA-GGGAGAGAAGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 481760 161 - 6778120 AGAAG-------ATCAGGT------CCCACGCGG-------------------------------------TGCTGGCCACACCTGCCTCC----------GT-----GATCTCAGCCC---------TGCTCTCTTGAAGGTGAAC-----TTGCTA---CTG----ACTGGAAGGCATCAGCCTCCCTCGTTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGA-GGGAGAGAGGA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 42041 147 - 3732694 AGAAG-------ATCAGGT------CCCAG------------------------------------------GCTGGCCACACCCGCCTCC----------GT-----GATCTCAGCCC---------TGCTTTCTTGAAGGTGAAC-----TTGCTA---CTG----A--------CATCACACTCCCTAGTTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGA-GGGA-GGGAGAGAGGC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 485855 164 - 608964 AGAAG-------AGCAGGG------CCCAGGTGA-------------------------------------AGCT-GCCACACCCACCCCT---------GGT-----GATTTCAGCGC---------TGCTCCCTCAACAGTGGAC-----TTGCTACAGTTG----AGT-GAAGGTATCACATGTCTTAGTTTCTGCCTGAGCACAGAGATGA-------GGGTAAAGGTGGGAGAGGGAATTAAAAACAGGG i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65479986 169 - 98207768 agaaA-------GGCAAGA------CCCTGGAGA-------------------------------------TACCAGCCATACCAGCCATC----------CC-----TGCCCCACCCCAAGCCCCAATCTTCTCTCAAAGGTGAAC-----TGGCTA---CAGTTAAATTCGAATTTAACAAATT--ATAGTTTCCTGCATAACTCC---AAGA-------GAGTAAAGGTGAGAGAGGGTA-TAGGGACAGGA i mm10.chr16 I 494 I 1891 s canFam3.chr33 29119377 182 + 31377067 AGAAGTGGTGGAAACAGGGGGGCGACCCAGCTGG-------------------------------------AGCTCACCACACCTGCCCCT----------GCCCTGAGATTTCAACCC---------CATTCTTTCAAAGGCGGACTTACACTACAG---CTG----AGT-GAAGGCCTCGTACTTCCTGGTTTCCTCTTGAATCCCACTAAGA-------GAAC-AGGGTAGGCAGGGGGA-GAGGGACAGGA i canFam3.chr33 I 5 C 0 s dasNov3.JH569502 3954119 210 + 6579706 AGAAG-------AGCCGGG------CCTGGATGGAGGGTCCCAAACCCCAGGCCCGAGATAGGGAGGGGACCACAGGCCAGCCCCTCCTCCCCCGGAGCTGGT-----GATCTCAGCCC---------TGCTTTCTCAAGGGTGGAC-----TCGCTGCAGCTG----AGT-GAACATATTGTCCTTCCTGGTTTCTTTCTGAACCCAGAGAACA-------GAGTAAGGGTGGACAAAGAGA-CAAGGACAGAA i dasNov3.JH569502 I 20 C 0 a score=6705919.000000 s hg38.chr3_KI270779v1_alt 199219 663 + 205312 CAGTATATCTAA----AAATAAACGTACCCCACCTCA-ACCTCAAGCATTGCACAGAAAGGTGTGTCCGCCT-GCTCTTCACC-----CGCC---T--------GTGACCCCCGCATTCCCTCCAGG--TGAGCAGGAGCCCGACCTAGACAC--TCTCTTTAGCC-TACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACTTCTCACCAAGCCACACCCC--TTGAAACTGCTTCCTCGG-GTGCACCTGGAGTGTTCTCACTCCTCGG-CCCCAGTTCCCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAAGAGGGTGATGCGTCATAAGCC-----TGC------AT----------------------------------GGACATTG-------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGT----------------CCGGAGACGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCGGGACCTGGCGAGGCCCAGGGGGCGAGCCTTCGG--GCAACATCTAGCCTGGCACTCCTGGTTTCGTGCTGGAGGAGCAGGGTGAGAGAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTG-GGTGCT--GGGGGAAAGAGCAGGAGCTTTGGAgtcactgtgg---gc-aagccacttcctagctgagcctcagtctccatgtctgcacagtggggagagtagacgtaattcctaTTAGCTTAGTACGTCGTAGATTCTCAGC-----AAATGTTAG s panTro5.chr3 200185573 663 + 202621043 CAGTATATCTAA----AAATAAACGTACCCCACCTCA-ACCTCAAGCATTCCACAGAGAGGTGTGTCCGCCT-GCTCTTCACC-----TGCC---T--------GTGACCCCCGCATGCCCTCCAGG--TGAGCAGGAACCCGACCTAGATAC--TCTCTTTAGCC-TACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACTTCTCACCAAGCCACACCCC--TTGAAACTGCTTCCTCGG-GTGCACCTGGAGTGTTCTCACTCCTTGG-CCCCAGTTCCCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAAGAGGGTGATGCGTAATAAGCC-----TGC------AT----------------------------------GGACATTG-------------------TCACTGAAATGAAATCTCAGCTTCCAGGGT----------------CCGGAGATGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCGGGACCTGGCGAGGCCCAGGGGGCAAACCTTCGG--GCAACATCTAGCCTGGCCCTCCTGGTTTCGTGCTGGAGGAGCAGGGTGAGAGAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTG-GGTGCT--GGGGGAAAGAGCAGGAGCTTTGGAgtcactgtgg---gc-aagccacttcctagctgagcctcagtctccatgtctgcacagtggggagattagacgtaattcctaTTAGCTTAGTACATCGTAGATTCTCAGC-----AAATGTTAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143068 641 + 190779 CAGTATATCTAA----AAATAAACGTACCCCACCTCA-ACCTCAAGCATTCCACAGAGAGGTGTGTCCGCCT-GCTCTTCACC-----TGCC---T--------GTGACCCCCGCATGCCCTCCAGG--TGAGCAGGAACCCGACCTAGACAC--TCTCTTTAGCC-TACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACTTCTCACCAAGCCACACCCC--TTGAAACTGCTTCCTCGG-GTGCACCTGGAGTGTTCTCACTCCTCGG-CCCCAGTTCCCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAAGAGGTTGATGCGTAATAAGCC-----TGC------AT----------------------------------GGACACTG-------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGT----------------CCGGAGACGGCTTTGGCCCCAAGGTGCCAGGGATAGCATAAGCTG-CCGGGACCTGGCGA---------------------G--GCAACATCTAGCCTGGC-CTCCTGGTTTCGTGCTGGAGGAGCAGGGTGAGACAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTG-GGTGCT--GGGGGAAAGAGCAGGAGCTTTGGAgtcactgtgg---gc-aagccacttcctagctgagcctcagtctccatgtctgcacagtggggagagtagacgtaattcctaTTAGCTTAGTACATCGTAGATTCTCAGC-----AAATGTTAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 32646 663 - 189199 CAGTATATCTAA----AAATAAACATACCCCACCTCA-ACCTCAAGCATTCCACAGAAAGGTGTGTCCGCCT-GCTCTTCGCC-----CGCC---T--------GTGACCCCCACATGCCCTCCAGG--TGAGGAGGAGCCCGACCTAGACAC--TCTCTTTAGCC-TACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACTTCTCACCAAGCCACACCCC--TTGAAACTGCTTCCTCAG-GTGCACCTGGAGTGTTCTCACTCCTCGG-CCCCAGTTCCCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAAGAGGGTGATGCGTAATAAGCC-----TGC------AT----------------------------------GGACATTG-------------------TCACTGAAATGAAAGCTCAGATTCCAGGGT----------------CCGGAGACGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCGGGACCTGGCGAGGCCCAGGGGGCGAGCCTTCGG--GCAACATCTAGCCTGGCCCTCCTGGTTTCGTGCTGGAGGAGCACGGTGAGAGAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTG-GGTGCT--GGGGGAAAGAGCAGGAGCTTTGGAgtcactgtgg---gc-aagccacttcctagctgagcctcagtctccatgtctacacagtggggagagtagacgtaattcctaTTAGCTTAGTACATCGTAGATTCTCAGC-----AAATGTTAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120950619 644 + 123690457 CAGTATATCTAA----AAATAAACGTATCCCACCTCA-ACCTCAAGCATTCCACAGAAAGGTGTGTCCACCT-GCTCTTCACC-----CGCC---T--------GTGACCCCCGCGTGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACAC--TCTCTTTAGCC-CACA-CA-TGCCAGACTCTCCCATTAGAGGAAAAAGGGACTTCTCACCAAGCCACAGCCC--TTGAGACTGCTTCCTCAG-GTGTGCCTGGAGTGTTCTCACTCCTCAG-CCCCAGTTCCCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAAGAGGGTGATGACTAATAAGCC-----TGC------AT----------------------------------GGACATTG-------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGT----------------CCAGAGACGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAACTG-CCGGGACCTGCCGAGGCCCAGGGGGCGAGCCTTCGG--GCAGCATCTAGCCTGGCCCTCCTGGTTTCCCGCTGGAGGAGCAGGG-------------------TGAGCTGTAGGGGGCAGAGCG-GGTGCT---GGGGAAACAGCAGGagctgtggagtcactgtgg---gc-gagccacgtcctagctgagcctcagcctccatgtctgcacagtggggagagcagacGGAATTCCTATTAGCTTAGCACAGCGTAGATTCTCAGC-----AAATGTTAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202525526 661 + 204787373 C-GTGTATCTAA----AAATAAACGCGCCCCACCTCA-ACCTCAAGCATTCCACAGACAGGGGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GCGACCCCTGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTGGCC-CACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCACCCC---TGACACT-TTGCCTCAG-GTGCACCTGGAGTGTTCTCAGTCGTCGG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCGGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGG--GCAGCACCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCG-GGTGCC---AGGGAAAGAGCAGGAGCTTTGCAgtcactgcgg---gcgaagccacttcctagctgagccccaggctccacgtctgcacagtcaggagagtagacgtgatTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 130826 661 + 192460366 C-GTGTATCTAA----AAATAAACGCGCCCCACCTCA-ACCTCAAGCATTCCACAGACAGGGGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GCGACCCCTGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTAGCC-CACA-CA-CGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCACCCC---TGACACT-TTGCCTCAG-GTGCACCTGGAGTGTTCTCAGTCGTCGG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCGGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGG--GCAGCACCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCG-GGTGCC---AGGGAAAGAGCAGGAGCTTTGCAGTCACTGCGG---GCGAAGCCACTTCCTAGCTGAGCCCCAGGCTCCACGTCTGCACAGTCAGGAGAGTAGACGTGATTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617040 662 + 19675229 CAGTATATCTAA----AAATAAATGCGCCCCACCTCA-ACCTCAAGCATTCCACAGACAGGGGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GCGACCCCCACATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTAGCC-CACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCACCCC---TGACACT-TTGCCGCAG-GTGCACCTGGAGTGTTCTCAGTCGTCGG-ACCCAGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGTTGAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCAGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGG--GCAGCACCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGgaggcagagcg-ggtgcc---agggaaagagcaggagctttgcagtcactgcgg---gcgaagccacttcctagctgagccccaggctccacgtctgcacagtcaggagagcagacgtgatTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549165 663 + 16847902 CAGTGTATCTAA----AAATAAATGCGCCCCACCTCA-ACCCCAAGCATTCCACAGACAGGGGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GCGACCCCCGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCCAGACACCTTCTCTTTAGCC-CACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCACCCC---TGACACTGTTTCCTCAG-GTGCACCTGGAGTGTTCTCAGTCCTCGG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CTGGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGG--GCAGCACCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCA-GGTGCC---AGGGAAAGAGCAGGAGCTTTGCAgtcactgcgg---gcgaagccacttcctagctgagccccaggctccacgtctgcacagtcaggagagtagacgtgatTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480043 662 - 91754291 CAGTGTATCTAA----AAATAAATGCACCCCACCTCA-ACCTCAAGCATTCCACAGACAGGTGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GTGACCCCCGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTAGCC-CACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTTACCAAGCCCCACCTC---TGACACTGCTTCCTCAG-GTGCACCTGGAGTGTTCTCAGTCCTCGG--CCCGGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGGAGCTGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CTGGGACCTGGCGAGGCCCAGGGTTCGAGGCTTCGG--GCAGCACCTAGCCCGGCCCCCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCG-GGTGCC---AGGGAAAGAGCAGGAGCTTTGCAGTCACTGCGG---GCAAAGCCGCTTCCTAGCTGAGCCCCAGGCTCCACGTCTGCACAGTCGGGAGAGTAGACGTGATTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 664245 663 - 1977891 CAGTGTATCTAA----AAATAAACGCGCCCCACCTCA-ACCTCAAGCATTCCACAGACAGGGGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GCGACCCCCGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCCAGACACCTTCTCTTTAGCC-CACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCACCCC---TGACACTGCTTCCTCAG-GTGCACCTGGAGTGTTCTCAGTCCTCGG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CTGGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGG--GCAGCACCTAGCCCGGCCCTCCTGGTTCCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCG-GGTGCC---AGGGAAAGAGCAGGAGCTTTGCAGTCACTGCGG---GCGAAGCCACTTCCTGGCTGAGCCCCAGGCTCCACGTCTGCACAGTCAGGAGAGTAGACGTGATTCCTGCGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 527991 657 + 7796314 CAGTATATCTAA----AAATAAATGCACCCCACCTCA-ACCTCAAGCATTCCACAGACAGGTGCGTCCGCCT-GCTTTTCACC-----CACC---T--------GTGACCCCCGCATGCCCTGCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTAGCC-CACA-CA-GGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCACCCC---TGACACTGCTTCCTCAG-GTGCGCCTGGAGTGTTCTCA------AG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGTAAGAGGGTGATGACTGATAAGCC-----TGC------AT----------------------------------GGACATT--------------------TCACTGAAATGAAAGCTCAGCTTCCAGGGC----------------CCGGAGCCAGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTG-CCGGGACCTGGCAAGGCCCAGGGTTCGAGCCTTCGG--GTAGCATCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCAGGGTGAGAGAAGG-GCCGCTGTTGAGCTGTAGGAGGCAGAGCA-GGTGCC---AGGGAAAGAGCAGGAGCTTTGCAgtcactgcgg---gcaaagccacttcctagctgagccccaggctccacgtctgtacagtcgggaGAGCAGACGTCATTCCTGTCAGCTCAGCACGTCGCAGGCTCTCAGC-----AAATGTGAG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989143 670 - 74750902 CAGTATATCTAA----AAATAACTGTACCCCACCTCG-ACCTCAAGCATTCCACAGACAGGTGTGTCCACCC-GCTCCTCACC-----CGCC---C--------GTGACCCCCGTGTGCCCTCCAGG--TGGGGAGGAACTAGACCTGGACACTTCTTCTTCAGCC-CACACCA-TGCCAGACTCTCCCTTTAG-TGAAAAAGGGACCTCTTCCCAGGCCCCACCCC-ATTGAACCTGCTTCCGCAG-GTGCACCTGGAATGTTCTCAGTCCTCCGCCCCCACTTCTCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAGGAGGAGGATGATGAATAAGGCTCCATTTC------AT----------------------------------GGACATTG-------------------TCACTGAAATGAAAGCTCAGCCTCCGAGGT----------------CCGGAGACGGCTTTGCATCCAAGAAGCCAGGGACAGCATAAGCTG-CCAGAATCTGGTGAGGCCTAGGAGGCGAGCCTTTGG--GCAGCCTCTCGCCTTGTTCCCCTGGTTTCCTGCTGGAGGAGCACGGTGTGAGAGGG-GCTGCAGCTGCGCTGTAGGAGCCAGGGTG-GGTGCT---GGGGAAAGAGCAGGAGCTTTGGAgtcactgtgg---gg-aagcc-cttcctagctgagcctcagtctccacatctgcacagccgggaGAGGGGATGTCATTCCTATCAGCTTAGTGCATCGTGGGCTCTCAGC-----AAATGTTAG i calJac3.chr17 C 0 I 2 s saiBol1.JH378146 506292 661 + 17725628 CAGTATATCTAA----AAATAGATGTACCCCACCTCC-ACCTCAAGCATTCCACGGACAGGTGTGTCCGCCC-GCTCCTCACC-----TGCC---T--------GTGACCCCCGCATGCCCTCCAGG--TGGGGAGGAACTAGACCTGGACA---CTTCTTCAGCC-CGGACCA-TGCCAGACTCTCCCTTTAG-CGGAAAAGGGACTTCTTCCCAAGCCCCACCCG-CTTGAACCTGCTTCCGCAG-GTGCACCTGGAATGTTCTCACTCCTCTGCCCCCAGTTCTCACGCATACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAGGAGGATGATGATGAATAAGGC-----TGC------AT----------------------------------GGACATTG-------------------CCA-TGAAATGAAAGCTCAGCTTCCGGGAT----------------CCGGAGACGGTTTTGCTTCCAAGGGGCCAGGGGCAGCATAGGCTG-CCAGGATCTGGCGAGGCCCAGGAGGCGAGCCTTTGG--GCAGCGTCTCACCTGGTTCCCCTGG--TCCTGCTGGAGGAGCA-GGTGTGACAGGG-GCTGCTGCTGAGCTGTAGGAGGCAGGGTG-GGTGCT---GGGGGAAGGGCAGGAGCTTTGGAGTTACTGCGGGGAGG-AAGCC-CTTCCTAGCTGAGCCTCAGTCTCCACATCTGCACAGCTGGGAGAGGGGATGCAATTCCTATTAGCTTAGTGCATCATGGGTTCTCAGC-----AAATGTTAG i saiBol1.JH378146 C 0 I 2 s cebCap1.NW_016107444v1 481921 646 - 6778120 CAGTATATCTCA----AAATAAATGCACCCCACCTCC-ACCTCAAGCATTCCACAGACAGGTGTGTCCACCC-GCTCCTCACC-----CGCC---T--------GTGACCCCTGCGTGCCCTCCAGG--TGGGGAGGAACTAGGCCTGGACACTTCTTCTTCAGCC-CACACCA-TGCCAGACTCTCCCTTTGG-CGAAAAAAGGACTTCTTCCCAAGCCCCACCCC-CTTGAACCTGCTTCCACAG-GTGCACCTGGAATGTTCTCACTCCTCTGCCCCCAGTCCTCACTCACACTTCCTGGAGCT-------------------------GGAGGAGGGGGCAGGAGG-TGACGGTGAATAAGGC-----TGC------AT----------------------------------GGACATTG-------------------TCACTGAAGTGGAAGCTCAGCTTCCGGGGT----------------CCG------------------AGGGGCCAGGGGT-GCACAGGCTG-CCAGGATCTGGTGAGGCTCAGGAGGCGAGCCTGTGG--GCAGCGTCTTGCCTGGTTCCCCCGG--TCCTGCTGGAGGAGCAGGGTGTGACAGGG-GCTGCTGCTGAGCTGTCGGAGGCAGGGTG-GGTGCT---GGGGAACGAGCAGGAGCTTTGGCGTCACTGTGGGGAGG-AAGCC-CTTCCTAGCTGAGCCTCAGTCTCCACGTCTGCACAGCCGGGAGACGGGATGTAATTCCTAGTAGCCTAGTGCATCGTGGGTTCTCAGC-----AAATGTTAG i cebCap1.NW_016107444v1 C 0 I 27 s aotNan1.NW_018507959v1 42188 656 - 3732694 CAGTATACCTAAAACTAAATAAATGTACCCCACCTCA-GCCTCCAGCATTCCACAGACAGGTGTGTCCGCCC-GCTCCTCACC-----CGCC---T--------GTGACCCC-GCGTGCCCTCCAGG--TGGGGAGGAACTAGACCCGGACA---CTTCTTCAGCT-CACACCA-CGCCAGACTCTCCCTTTAG-GGGAAAAGGGACTTCTTCCCAGGCCCCACCCC-CTCGAACCTGCTTCTGCAG-GTGCACCTGGAATGTTCTCACTCCTCCGCCCCCAGTTCTCACTCACGCTTCCTGGAGCT-------------------------GGAGGA-GGGGCAGGAGGATGGTGATGAATAAGGC-----TGC------AT----------------------------------GGACATCA-------------------TCACTGAAATGAAAGCTCAGCTTCTGGGGT----------------CCGGAGACAGCTTTGCGTCCAAGGGGCCGGGGGCAGCATAAGCTG-CCAGGGTGTGGCGAGGCCCGGGAGGCGAGCCTTTGG--GCAGCGTCTCGCCTGGTTCCCCTGGTTTCCTGCTGGAGGGGCAGGGTGTGACAGGG-GCTGCTGCTGAGCTGCAGGGGGCAGGGTG-GGTGCC---GGGGAAAGAGCAGGAGCTCT-GAGTCGCTGTGG---GG-AAGCA-C-TCCTAGCTGAGC------CTCCACGTCTGCACAGCCGGGAGACGGGATGTGGTTCCTGTTAGCTTAGTGCATCGTGGGTTCTCAGC-----AAACGTCAG i aotNan1.NW_018507959v1 C 0 I 28 s otoGar3.GL873829 486019 669 - 608964 TGGTATATTTTA----AAATAAATTTACCCCACCCAG-TCCTTACGCATTCCATAGCCAGCCATGCCTGCCA-ACTCCCCTCCACACACACC---CCAAACACACTGACCCCCTCCTGCTCTGCAGC--TGGGGAGGAACTAGACCTAGACATTTTCTCTTTAGCTGCACA--A-TGCCAGACTCACCCTTTATTGGAAAAAGTGACTT---ATCATGCCCCACCCC--CTTGGTTTGCTTCCTCAG-ACGCATGCAAAATGTTCT---TTCTCAGCCCCCCGTTCACCCTTCCAGTCCTGGGAGCT-------------------------GGAAGAAGGGACAAGAGGATTATGACAAACAAACC-----TGC------CT----------------------------------CAAAGTTT-------------------TTACTGAAATGAAAGCTCAGCTTCCAAGGT----------------CTAGAGATGGCTTTAGCTACTAGGTGTCAGGTACTGAATAAGCTTCCCAGGATCTGGGGCGGCCCAGGAGGCAAGCCTGGGGGAGCAGCCATCAGCCTGGTTCTCCTAATTTCCTTCTGGAACTGCAGGGTGTGAAAGGT-GCTTTTGTGGAGCCCTAGACAGCAGAGTG-GGTGTC---GGGGAAGGAGCAAGGGCCTTGGAGTCTCTGTGG---GC-AAGCTACCTCCTAGCCGAGT------CCTCACATCTGCACAGTTGGAATAGTAGTAGTGATTCCTATTtgcttagcacatagtaggttctcaac-----aaatgctag i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29119559 688 + 31377067 CAGTAAA----A----ACATAAAGGAACCCTACCCTGTGACCCAGGCATTCCACAGCCAGGCTTGGA-GCCA-ACTCTCCACC-----CCCCACAC--------CAGACCCCTCCCTGCTCTCCGGGGTTGGGAAAGA-----ACCTACACGTCTTCCCCTCTGCT-CACA-CAGTCCCAGACTCTTCCTTTATAGGAAAAAGTGACTTCTCACTTTGCTCTGTCCCCCTTGAAATGCCTTCTTCCGAATGTGCCTGGAACGTTGTCTCCCCCTAGCCCTCAATTGCCACCCACACTTCCTGGAGCCCCGGAGAGCTGG---GGGTCAGATGGGAGAAGGAGGCAAGAGGATTATCATCGCTAAGCC-----TGC------GTCCCATGTCCCATGTGGGGGTGCGGTACTGCAAGATGAGGTTG-------------------GCTCTGAGGTGAGCATGAAGCTTC-GGGGC----------------CAGGAGGCTGTGTTAGCCGTGAGGTGCCAGG---------------TCAGGG---GAGGGGGCCTGAGGGAGGGGCCACCAG--------------CTGGTTCTCC-----TTCCAATGAAGGGG---AATGTGAGGGGGAGCTGCGGCCAAGCCCCAGAAGGCAGAGTG-GGTGCTCCAGGGGAAAGAACAGG-GCTTTGGGgtcaccatgg---gc-aacctgctttccagttgaacctcagtctccccatctgcacaatgggaatagta---atgatttctaTTAGGTTAACACATAGAAGTTTCTTGACTTTCTCTGTATCAG i canFam3.chr33 C 0 I 5 s dasNov3.JH569502 3954329 670 + 6579706 CAATATATTTAA----AACAAGAAAAGCCCCACCCGG-GCCCCAGGCATTCCGCAGCGGGGAGTGTCAGCCCAGCTC----CC-----CCAC---G--------GCGGGCCCCGC-TGCCCCGCATC--TGTGGAAGTTGCCGCCCGGGATGCCTTGCCTGTAGCC-TGCA-CA-GCCCAGACTCGACCTTTACTGAGAAAAGCGGTGTCTCACCTTGCACCACCCT-CCTGAAACTGCTTCTTCAA-GTGTGCTTGGAATGTCCTCTCTCCCCAT-CCCCAGTTCCCACCCACACCCCCCAGAGCTCTCAAGAGCTGGGATGGGCC-----AGAGGAGGAGGTAAGAGGATTATGATTAATAAGCC-----TGCGCCCGTAT----------------------------------GGATGTAGTGACCACAAGATTAGGTTTTCTCAGAAATGAGAGTTCAGCTTCGCGGGCTTGTCAGCCTGAGTCACTAGAGACTGCTTCAGCCCCCAGATCCCAGGTCCAGAACCTTCTGCCCAGGACAT--------CCAGGAGAGGAGCCTCAGG--GGAGCAGCCAGCG--------------GCCTGCGGGCGGAG------------GGG-ACCCC----------TAGAAGACAGAGCACGGCTCC---AGGGGGCCGACGAGGGCTTTGGGGTCACAGAGG---AC-AGGTG-CTTCCTAGC---GCACCTGCCtccccatctgcatgatgagaata------ataattcctattagctgagcacacagtaggttcttgAC-----AAATGTTAC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I a score=88137.000000 s hg38.chr3_KI270779v1_alt 199882 24 + 205312 CGT-CCCCACGCCACCGCCCCCCAG--- s panTro5.chr3 200186236 24 + 202621043 CGT-CCTCACGCCACCGCCCCCCAG--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143709 24 + 190779 CGT-CCCCACGCCACCGCCCCCCAG--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33309 23 - 189199 -GT-CCCCACGCCACCGCCCCCCAG--- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951263 22 + 123690457 CGT-CCCCC--CCACCGCCCCCCAA--- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526187 23 + 204787373 CGT-CCCCT-GCCCCTGCCCCCCGA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131487 23 + 192460366 CGT-CCCCT-GCCCCTGCCCCCCGA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617702 23 + 19675229 CGT-CCCCT-GCCCCTGCCCCCCGA--- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549828 23 + 16847902 CGT-CCCCT-GCCCCTGCCCCCCGA--- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480705 23 - 91754291 CGT-CCCCT-GCCCCTGCCCCCCGA--- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 664908 23 - 1977891 CGT-CCCCT-GCCCCTGCCCCCCGA--- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528648 24 + 7796314 CGTCCCCCT-GCCCCTGCCCCCCGA--- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989815 24 - 74750902 CTT-CCCTCCCCACCCTCCGCCCGG--- i calJac3.chr17 I 2 I 2 s saiBol1.JH378146 506955 24 + 17725628 CTT-CCCTCCCCCGCCTCCGCCCGG--- i saiBol1.JH378146 I 2 I 2 s otoGar3.GL873829 486688 18 - 608964 tGG-CCTCC-TCCCCTGCAG-------- i otoGar3.GL873829 C 0 I 3 s canFam3.chr33 29120252 23 + 31377067 CCT-CCCCC-TGCCCCACCCCCCAC--- i canFam3.chr33 I 5 C 0 s dasNov3.JH569502 3954999 12 + 6579706 ----------------TCACCCCAGGGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e aotNan1.NW_018507959v1 42844 28 - 3732694 I e cebCap1.NW_016107444v1 482567 27 - 6778120 I a score=679301.000000 s hg38.chr3_KI270779v1_alt 199906 63 + 205312 ATGTGGGCATGGAAAGAGA---AACAAACTATTTGGAAGGAGAGTCTGGG-GTTGTTCTGGGTGGAG s panTro5.chr3 200186260 63 + 202621043 ATGTGGGCATGGAAAGAGA---AACAAACTATTTGGAAGGAGAGTCTGGG-GTTGTTCTGGGTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143733 59 + 190779 ATGTGGGCATGGAAAGAGA---AACA----ATTTGGAAGGAGAGTCTGGG-GTTGTTCTGGGTGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33332 63 - 189199 ATGTGGGCATGGAAAGAGA---AACAAACTATTTGGAAGGAGAGTCTGGG-GTTGTTCTGGGTGGAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951285 63 + 123690457 ATGTGGGCATGGAAAGAGA---AACAAACTATTTGGAAGGAGAGTCTGGG-GTTGTTCTGGGTGGAG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526210 63 + 204787373 ATGTGGACGTGGGAAGAGA---AACAAACTCTTTAGAAGGAGAGTCTAGG-GTTGTTCTGGGTGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131510 63 + 192460366 ATGTGGACGTGGGAAGAGA---AACAAACTCTTTAGAAGGAGAGTCTAGG-GTTGTTCTGGGTGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617725 63 + 19675229 ATGTGGACGTGGGAAGAGA---AACAAACTCTTTAGAAGGAGAGTCTAGG-GTTGTTCTGGGTGGAG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549851 63 + 16847902 ATGTGGACGTGGGAAGAGA---AACAAACCCTTTAGAAGGAGAGTCTAGG-GTTGTTCTGGGTGGGG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480728 63 - 91754291 ATGTGGACGTGGGAAGAGA---AACAAACTCTTTAGAAGGAGAGTCTAGG-GTTGTTCTGGGCGGGG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 664931 63 - 1977891 ATGTGGACGTGGGAAGAGA---AATAAACCCTTTAGAAGGAGAGTCTAGG-GTTGTTCTGGGTGGGG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528672 59 + 7796314 ATGTGGACATGGGAAGAGA---AGCAAACTCTTT---AGGAGAGTCTAGG-GTTGTTCTGGGTGGA- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989841 60 - 74750902 ACGCGGGCATGGGAAGAGA---AAGAAACTATTTGGAAGGAGAGTCTGGG----GTTCTGGATGGAA i calJac3.chr17 I 2 C 0 s saiBol1.JH378146 506981 64 + 17725628 ACGTGGACATGGGAAGAGA---AACAAACTATTTGGAAGGAGAGTCTTGGGGTTGTTCTGGGTGGAA i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 482594 63 - 6778120 ACGTGGGCATGGGAAGAGA---AACAAACTATTTGGAAGGAGAGTCTGGG-GTTGTTCCGGGTGGAA i cebCap1.NW_016107444v1 I 27 C 0 s aotNan1.NW_018507959v1 42872 59 - 3732694 ACGTGGACACGGGAAGAG-------AAACTATTTGGAAGGAGAGTCTGGG-GTTGTTCTGGGTGGAA i aotNan1.NW_018507959v1 I 28 C 0 s otoGar3.GL873829 486709 66 - 608964 AGGTGAGCATGGAAAGAGAGAGAAAAAATTATTTGGAAGGAGAATTTGGG-ATTGTTCTGGGTGAAG i otoGar3.GL873829 I 3 I 1149 s canFam3.chr33 29120275 54 + 31377067 ----------AGAAAAAGAGCCAAGGAGTTGTTTAGAGCAAGAGCCTAGG-TCTTTGGGGGGCGG-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955011 66 + 6579706 AGGTGGACAGGGAAAGAAAGGCAGAAAGTTGTTTGGAAGGGGAGTCGGGA-GTTGTTCTGGGTGGAG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I a score=45770.000000 s hg38.chr3_KI270779v1_alt 199969 4 + 205312 -GGCC s panTro5.chr3 200186323 4 + 202621043 -GGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143792 4 + 190779 -GGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33395 4 - 189199 -GGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951348 4 + 123690457 -GGCC i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526273 4 + 204787373 -GGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131573 4 + 192460366 -GGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617788 4 + 19675229 -GGCC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549914 4 + 16847902 -GGCC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480791 4 - 91754291 -GGCC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 664994 4 - 1977891 -GGCC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528731 4 + 7796314 -GGCC i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989901 4 - 74750902 -GGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507045 4 + 17725628 -GGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 482657 4 - 6778120 -GGCC i cebCap1.NW_016107444v1 C 0 I 61 s aotNan1.NW_018507959v1 42931 4 - 3732694 -GGCC i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29120329 4 + 31377067 -GGTC i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955077 4 + 6579706 GGGC- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 486775 1149 - 608964 I e mm10.chr16 65480155 1891 - 98207768 I a score=11468.000000 s hg38.chr3_KI270779v1_alt 199973 2 + 205312 AG s panTro5.chr3 200186327 2 + 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143796 2 + 190779 AG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33399 2 - 189199 AG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951352 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526277 2 + 204787373 CG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131577 2 + 192460366 CG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617792 2 + 19675229 CG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549918 2 + 16847902 CG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480795 2 - 91754291 CG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 664998 2 - 1977891 CG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528735 2 + 7796314 CG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989905 2 - 74750902 AG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507049 2 + 17725628 AG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 42935 2 - 3732694 AG i aotNan1.NW_018507959v1 C 0 I 61 s canFam3.chr33 29120333 2 + 31377067 AG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955081 2 + 6579706 CG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 486775 1149 - 608964 I e mm10.chr16 65480155 1891 - 98207768 I e cebCap1.NW_016107444v1 482661 61 - 6778120 I a score=46474.000000 s hg38.chr3_KI270779v1_alt 199975 12 + 205312 GTCATAGACATG s panTro5.chr3 200186329 12 + 202621043 GTCATAGACATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143798 12 + 190779 GTCATAGACATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33401 12 - 189199 ATCATAGACATG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951354 12 + 123690457 ATCACAGACATG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526279 12 + 204787373 ATCATAGACATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131579 12 + 192460366 ATCATAGACATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617794 12 + 19675229 ATCATAGACATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549920 12 + 16847902 ATCATAGACGTG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480797 12 - 91754291 ATCATAGACCTG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665000 12 - 1977891 ATCATAGACATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528737 12 + 7796314 ATCGTAGACACG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989907 5 - 74750902 ATCAC------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507051 5 + 17725628 GTCAC------- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29120335 7 + 31377067 CTCTTTG----- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955083 5 + 6579706 -------GCACG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 486775 1149 - 608964 I e mm10.chr16 65480155 1891 - 98207768 I e aotNan1.NW_018507959v1 42937 61 - 3732694 I e cebCap1.NW_016107444v1 482661 61 - 6778120 I a score=389635.000000 s hg38.chr3_KI270779v1_alt 199987 61 + 205312 ATGTGGTGGCAATGCCTGATTCTGGCTGAGGGAATCATTCTGGAATGGTGAGGGGGT-------GGAT s panTro5.chr3 200186341 61 + 202621043 ATGGGGTGGCAATGCCTGATTCTGGCTGAGGGAATCATTCTGGAATGGTGAGGGGGT-------GGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143810 61 + 190779 ATGGGGTGGCAATGCCTGATTCTGGCTGAGGGAATCATTCTGGAATGGTGAGGGGGT-------GGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33413 61 - 189199 ATGGGGTGGCAATGCCTGATTCTGGCTGAGGCAATCATTCTGGAATGGTGAGGGGGT-------GGGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951366 61 + 123690457 ATGGGGTGGCAATGCCCGATTCTAGCTGAGGGAATCATTCTGGAAGGGTGAGGGGGT-------GGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526291 61 + 204787373 ACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGGT-------GGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131591 61 + 192460366 ACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGGT-------GGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617806 61 + 19675229 ACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGGT-------GGGC i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549932 61 + 16847902 ACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGGT-------GGGC i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480809 61 - 91754291 ACGGAGTGACAATGCCTGATTCTGGCTGAGGGAGTAATTCTGGAAGAGGGAGGAGGT-------GGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665012 61 - 1977891 ACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGGT-------GGGC i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528749 61 + 7796314 ACGGAGTGACAACGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGGT-------GGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989912 27 - 74750902 ----------------------------------TGATTCTGGAAGGGAGACGTGGT-------GAGG i calJac3.chr17 C 0 I 9 s saiBol1.JH378146 507056 45 + 17725628 ----------------TGATTCTGGCTGAGTGAGTGATTCTGGAAGGGAGACGGAGT-------GAGG i saiBol1.JH378146 C 0 I 8 s otoGar3.GL873829 487924 65 - 608964 ---ATGTGATGGTGTCCAGTTCTGGCTGATTGAATAGCTCTGGATGGGAGAGGGGGTTTAGGAAGGGT i otoGar3.GL873829 I 1149 I 3 s canFam3.chr33 29120342 59 + 31377067 AGGGGATTACAGTA--TAACTGGAGTGGAGTGACTAGCTGGGGAAGGGAAATAGGGC-------AGAG i canFam3.chr33 C 0 I 4 s dasNov3.JH569502 3955088 45 + 6579706 GGGAAGTGAGAGGGC--------------AGGAAAATCCCTGGAAGGGGGCGGGGGG-------AG-- i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e aotNan1.NW_018507959v1 42937 61 - 3732694 I e cebCap1.NW_016107444v1 482661 61 - 6778120 I a score=23506.000000 s hg38.chr3_KI270779v1_alt 200048 3 + 205312 CTG s panTro5.chr3 200186402 3 + 202621043 CTG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143871 3 + 190779 CTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33474 3 - 189199 CTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951427 3 + 123690457 CTG i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526352 3 + 204787373 ATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131652 3 + 192460366 ATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617867 3 + 19675229 ATG i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549993 3 + 16847902 ATG i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480870 3 - 91754291 ATG i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665073 3 - 1977891 ATG i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528810 3 + 7796314 ATG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989948 3 - 74750902 CTG i calJac3.chr17 I 9 C 0 s saiBol1.JH378146 507109 3 + 17725628 CTG i saiBol1.JH378146 I 8 C 0 s cebCap1.NW_016107444v1 482722 3 - 6778120 CTG i cebCap1.NW_016107444v1 I 61 C 0 s otoGar3.GL873829 487992 3 - 608964 CTT i otoGar3.GL873829 I 3 C 0 s canFam3.chr33 29120405 3 + 31377067 CTG i canFam3.chr33 I 4 C 0 s dasNov3.JH569502 3955133 2 + 6579706 -TG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e aotNan1.NW_018507959v1 42937 61 - 3732694 I a score=727810.000000 s hg38.chr3_KI270779v1_alt 200051 66 + 205312 GCCACA-----GGGCTCAGGAGACTATTGTCGTCTC-AGGGGTCCTCACAAA----------------GTG----------------GCTGGGCCAGGTGAGCT- s panTro5.chr3 200186405 66 + 202621043 GCCACA-----GGGCTCAGGAGACTATTGTCGTCTC-AGGGGTCCTCAGAAA----------------CTG----------------GCTGGGCCAGGTGAGCT- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143874 66 + 190779 GCCACA-----GGGCTCAGGAGACTATTGTCGTCTC-AGGGGTCCTCAGAAA----------------CTG----------------GCTGGGCCAGGTGAGCT- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33477 66 - 189199 GCCACA-----GGGTTCAGGAGACTATTGTCGTCTC-AGGGGTCCTCAGAAA----------------CTG----------------GCTGGGCCAGGTGAGCT- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951430 66 + 123690457 GCCACA-----GGGTTCAGGAGACTGTTGGCCCCTC-AAGGGTCCTCGAAAA----------------CTG----------------GCTGGGCCAGGTGAGCT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526355 66 + 204787373 GCCACA-----AGGCTCGGGAGGCTATTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131655 66 + 192460366 GCCACA-----AGGCTCGGGAGGCTATTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617870 66 + 19675229 GCCACA-----AGGCTCGGGAGGCTATTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 549996 66 + 16847902 GCCACA-----AGGCTCAGGAGGCTATTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480873 66 - 91754291 GCCACA-----AGGCTCAGGAGGATATTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665076 66 - 1977891 GCCACA-----AGGCTCAGGAGGCTACTGTCCCCTC-AAGGGTCCTCACAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528813 66 + 7796314 GCCACA-----AGGCTCAGGAGGCTATTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGCT- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 989951 66 - 74750902 GCCACA-----GGGCTTAGGAGGCTGCTGTCCCCTC-AAGGATCCTCGCAAA----------------CTG----------------GCTGGGTCAGGTGAGTT- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507112 66 + 17725628 GCCACA-----AGGCTCAGGAGGCTGCTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------GCTGCATCAGGTGAGCT- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 482725 66 - 6778120 GCCACA-----GGGCTCAGGAGGCTGCTGTCCCCTC-AAGGGTCCTCGCAAA----------------CTG----------------TCTGGGTCAGGTGAGCT- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 42998 66 - 3732694 GCCACC-----GGGCTCAGGAGGCTGCTGTCCCCTC-AAGGGTCCTCGCACA----------------CTG----------------GCTGGGTCAGGTGAGCG- i aotNan1.NW_018507959v1 I 61 C 0 s otoGar3.GL873829 487995 83 - 608964 GGCACA-----GGGCTCAGAAAGCTATTGTCCCCTCTTAGGGTCCTCATGTATAGGAAGACAGTTGATCTA----------------ACTGGACCAGGTGAGTT- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29120408 82 + 31377067 GCTATA-----GGGCTCAGGAGCCTACTATCCCCAC-CAGGCTCCTGGTAAA----------------CTGGGAGGTGATCTGCTCTGCTAGATCACGTGAACT- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955135 62 + 6579706 GGCAGAGCTTTGGACGCAGAAGGCTGCTGTCCCACC-A----------CAGC----------------CTG----------------GGTAAACCTGGGACGGCC i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I a score=68017.000000 s hg38.chr3_KI270779v1_alt 200117 6 + 205312 GGTGTT s panTro5.chr3 200186471 6 + 202621043 GGTGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143940 6 + 190779 GGTGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33543 6 - 189199 GGTGTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951496 6 + 123690457 GGTGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526421 6 + 204787373 GGTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131721 6 + 192460366 GGTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617936 6 + 19675229 GGTGTT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 550062 6 + 16847902 GGTGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480939 6 - 91754291 GGTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665142 6 - 1977891 GGTGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528879 6 + 7796314 GGTGTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990017 6 - 74750902 GGTGTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507178 6 + 17725628 GGTGTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 482791 6 - 6778120 GGTGTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43064 6 - 3732694 GGTGTT i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29120490 6 + 31377067 GATGTT i canFam3.chr33 C 0 I 5 s dasNov3.JH569502 3955197 3 + 6579706 AGC--- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I a score=32010.000000 s hg38.chr3_KI270779v1_alt 200123 3 + 205312 TCT s panTro5.chr3 200186477 3 + 202621043 TCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143946 3 + 190779 TCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33549 3 - 189199 TCT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951502 3 + 123690457 TCT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526427 3 + 204787373 TCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131727 3 + 192460366 TCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617942 3 + 19675229 TCT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 550068 3 + 16847902 TCT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480945 3 - 91754291 TCT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665148 3 - 1977891 TCT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528885 3 + 7796314 TCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990023 3 - 74750902 TCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507184 3 + 17725628 TCT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 482797 3 - 6778120 TCT i cebCap1.NW_016107444v1 C 0 I 75 s aotNan1.NW_018507959v1 43070 3 - 3732694 TCT i aotNan1.NW_018507959v1 C 0 I 15 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955200 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I a score=49689.000000 s hg38.chr3_KI270779v1_alt 200126 11 + 205312 TATA---------TGCGGGT s panTro5.chr3 200186480 11 + 202621043 CATA---------TGCGGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143949 11 + 190779 CATA---------TGCGGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33552 11 - 189199 CATA---------TGCAGGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951505 11 + 123690457 CATA---------CGCAGGT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526430 11 + 204787373 CCTG---------TGCAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131730 11 + 192460366 CCTG---------TGCAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617945 11 + 19675229 CCTG---------TGCAGGT i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 550071 11 + 16847902 CCTG---------TGCAGGT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480948 11 - 91754291 CGTG---------TGCAGGT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665151 20 - 1977891 CCTGACCTTTACCTGCAGGT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528888 11 + 7796314 CATG---------TGCAGGT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990026 11 - 74750902 CACA---------GGCAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507187 11 + 17725628 CACA---------GGTGAGT i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955200 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I a score=11521.000000 s hg38.chr3_KI270779v1_alt 200137 2 + 205312 AA s panTro5.chr3 200186491 2 + 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143960 2 + 190779 AA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33563 2 - 189199 GA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951516 2 + 123690457 AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526441 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131741 2 + 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617956 2 + 19675229 AA i macNem1.NW_012014355v1 C 0 C 0 s cerAty1.NW_012004056v1 550082 2 + 16847902 AA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480959 2 - 91754291 AA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665171 2 - 1977891 AA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528899 2 + 7796314 AA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990037 2 - 74750902 GA i calJac3.chr17 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955200 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e saiBol1.JH378146 507198 0 + 17725628 C a score=41579.000000 s hg38.chr3_KI270779v1_alt 200139 7 + 205312 AGGTGTT s panTro5.chr3 200186493 7 + 202621043 AGGTATT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143962 7 + 190779 AGGTATT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33565 7 - 189199 AGGTGTT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951518 7 + 123690457 AGGTGTT i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526443 7 + 204787373 AGGTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131743 7 + 192460366 AGGTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012014355v1 617958 7 + 19675229 AGGTGTT i macNem1.NW_012014355v1 C 0 N 0 s cerAty1.NW_012004056v1 550084 7 + 16847902 AGGTGTT i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480961 7 - 91754291 AGGTGTT i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665173 7 - 1977891 AGGTGTT i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528901 7 + 7796314 AGGTGTT i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3955200 2 + 6579706 -----TT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C a score=38189.000000 s hg38.chr3_KI270779v1_alt 200146 15 + 205312 GCTCGTATGCAGGTA- s panTro5.chr3 200186500 15 + 202621043 TCTCCTATGCGGGTA- i panTro5.chr3 C 0 T 44 s panPan2.chrUn_NW_014024201v1 143969 15 + 190779 TCTCCTATGCGGGTA- i panPan2.chrUn_NW_014024201v1 C 0 T 44 s gorGor5.CYUI01000254v1 33572 14 - 189199 T-TCATATGCAGGTA- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951525 13 + 123690457 TCTC--ATACGGGTA- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526450 15 + 204787373 TCTCATGTGCAGGTA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131750 15 + 192460366 TCTCATGTGCAGGTA- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 550091 15 + 16847902 TCTCATGTGCAGGTA- i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480968 15 - 91754291 TTTCATACACAGGTA- i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665180 15 - 1977891 TCTCATGTGCAGGTA- i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528908 15 + 7796314 TGTCACACGCAGGTA- i colAng1.NW_012118932v1 C 0 C 0 s dasNov3.JH569502 3955202 8 + 6579706 --------GCTTGCAT i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C a score=6552.000000 s hg38.chr3_KI270779v1_alt 200161 2 + 205312 AA s gorGor5.CYUI01000254v1 33586 2 - 189199 AA i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951538 2 + 123690457 AA i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526465 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 131765 2 + 192460366 AA i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 550106 2 + 16847902 AA i cerAty1.NW_012004056v1 C 0 C 0 s chlSab2.chr15 480983 2 - 91754291 AA i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665195 2 - 1977891 AA i manLeu1.NW_012102020v1 C 0 C 0 s colAng1.NW_012118932v1 528923 2 + 7796314 AA i colAng1.NW_012118932v1 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955210 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e panPan2.chrUn_NW_014024201v1 143984 44 + 190779 T e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e panTro5.chr3 200186515 44 + 202621043 T a score=32118.000000 s hg38.chr3_KI270779v1_alt 200163 10 + 205312 GGTGTTTCTC s panTro5.chr3 200186471 10 + 202621043 GGTGTTTCTC i panTro5.chr3 T 44 C 0 s panPan2.chrUn_NW_014024201v1 143940 10 + 190779 GGTGTTTCTC i panPan2.chrUn_NW_014024201v1 T 44 C 0 s gorGor5.CYUI01000254v1 33588 9 - 189199 GGTGTTTCT- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951540 9 + 123690457 GGTGTTTCT- i nomLeu3.chr11 C 0 C 0 s rheMac8.chr2 202526467 10 + 204787373 GGTGTTTCTC i rheMac8.chr2 C 0 N 0 s macFas5.chr2 131767 10 + 192460366 GGTGTTTCTC i macFas5.chr2 C 0 C 0 s cerAty1.NW_012004056v1 550108 10 + 16847902 GGTGTTTCTC i cerAty1.NW_012004056v1 C 0 N 0 s chlSab2.chr15 480985 10 - 91754291 GGTATTCCTC i chlSab2.chr15 C 0 C 0 s manLeu1.NW_012102020v1 665197 10 - 1977891 GGTGTTTCTC i manLeu1.NW_012102020v1 C 0 N 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955210 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C a score=15586.000000 s hg38.chr3_KI270779v1_alt 200173 13 + 205312 GTATGCGGGTAAA s panTro5.chr3 200186481 13 + 202621043 ATATGCGGGTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143950 13 + 190779 ATATGCGGGTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33597 12 - 189199 GTGTG-GGGTAAG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951549 12 + 123690457 -CATGCGGGTAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 131777 11 + 192460366 --ATGCAGGtaaa i macFas5.chr2 C 0 N 0 s chlSab2.chr15 480995 13 - 91754291 ATGTGCAGGTAAA i chlSab2.chr15 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955210 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C a score=1144.000000 s hg38.chr3_KI270779v1_alt 200186 2 + 205312 GG s panTro5.chr3 200186494 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143963 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33609 2 - 189199 TG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951561 2 + 123690457 GG i nomLeu3.chr11 C 0 I 8 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955210 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C a score=3280.000000 s hg38.chr3_KI270779v1_alt 200188 10 + 205312 TGTTTCTCGT s panTro5.chr3 200186496 10 + 202621043 TATTTCTCCT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143965 10 + 190779 TATTTCTCCT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33611 7 - 189199 ---TTCTCAT i gorGor5.CYUI01000254v1 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955210 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951563 8 + 123690457 I a score=33578.000000 s hg38.chr3_KI270779v1_alt 200198 49 + 205312 ATGCGGGTAAAGGTGTTTCTCGTATGCGGGTAAAGGTGTTTCTCGTATG s panTro5.chr3 200186506 49 + 202621043 ATGCGGGTAAAGGTGATTCTCATATGCGGGTAAAGGTGATTCTCATATG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 143975 49 + 190779 ATGCGGGTAAAGGTGATTCTCATATGCGGGTAAAGGTGATTCTCATATG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33618 44 - 189199 ATGCAGGTAAAGGTGTTTCTGGTGTGCGGGTAAAGGTGATTCTC----- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951571 47 + 123690457 ATGCAGGTAAAGGTGTTTCTCATAT--GGGTAAAGGTGTTTCTCATACG i nomLeu3.chr11 I 8 T 55 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955210 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C a score=3459.000000 s hg38.chr3_KI270779v1_alt 200247 8 + 205312 CGGGTAAA s panTro5.chr3 200186555 8 + 202621043 CGGGTAAA i panTro5.chr3 C 0 T 48 s panPan2.chrUn_NW_014024201v1 144024 8 + 190779 CGGGTAAA i panPan2.chrUn_NW_014024201v1 C 0 T 48 s dasNov3.JH569502 3955210 8 + 6579706 CAGGTGAG i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951618 55 + 123690457 T e gorGor5.CYUI01000254v1 33662 0 - 189199 C a score=100.000000 s hg38.chr3_KI270779v1_alt 200255 1 + 205312 G s dasNov3.JH569502 3955218 1 + 6579706 G i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e panPan2.chrUn_NW_014024201v1 144032 48 + 190779 T e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951618 55 + 123690457 T e gorGor5.CYUI01000254v1 33662 0 - 189199 C e panTro5.chr3 200186563 48 + 202621043 T a score=-1091.000000 s hg38.chr3_KI270779v1_alt 200256 63 + 205312 TGTTTCTCATGCAGGTAAAGGTGTTTCTCATATGTGGGTAAAGGTGTTTCTGATATGCAGGTG s gorGor5.CYUI01000254v1 33662 11 - 189199 ----------------------------------------------------ATATGCAGGTG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951563 60 + 123690457 TGTTTCTCATGCAGGTAAAGGTGTTTCTCATA--TGGGTAAAGGTGTTTCTCATACG-GGGTA i nomLeu3.chr11 T 55 C 0 s dasNov3.JH569502 3955219 19 + 6579706 -----------------------------------------TGGTATCACTCATATGCAG--- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e panPan2.chrUn_NW_014024201v1 144032 48 + 190779 T e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e panTro5.chr3 200186563 48 + 202621043 T a score=8016.000000 s hg38.chr3_KI270779v1_alt 200319 19 + 205312 AAGGTGTTTCTCATATGCG s panTro5.chr3 200186515 19 + 202621043 AAGGTGATTCTCATATGCG i panTro5.chr3 T 48 C 0 s panPan2.chrUn_NW_014024201v1 143984 19 + 190779 AAGGTGATTCTCATATGCG i panPan2.chrUn_NW_014024201v1 T 48 C 0 s nomLeu3.chr11 120951623 19 + 123690457 AAGGTGTTTCTTATATGCA i nomLeu3.chr11 C 0 C 0 s dasNov3.JH569502 3955238 8 + 6579706 -AGGGGTTT---------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e gorGor5.CYUI01000254v1 33673 0 - 189199 C a score=1878.000000 s hg38.chr3_KI270779v1_alt 200338 6 + 205312 GGTAAA s panTro5.chr3 200186534 6 + 202621043 GGTAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144003 6 + 190779 GGTAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33673 2 - 189199 ----AA i gorGor5.CYUI01000254v1 C 0 C 0 e otoGar3.GL873829 488078 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955246 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=15551.000000 s hg38.chr3_KI270779v1_alt 200344 24 + 205312 GGTGATTCTCACATGCGGGTAAAA s panTro5.chr3 200186540 24 + 202621043 GGTGATTCTCATATGCGGGTAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144009 24 + 190779 GGTGATTCTCATATGCGGGTAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33675 24 - 189199 GGTGTTTCTCGTATGCGGGTAAAA i gorGor5.CYUI01000254v1 C 0 C 0 s otoGar3.GL873829 488078 21 - 608964 GATGGTTCTCATATGCCGATA--- i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955246 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e calJac3.chr17 990039 0 - 74750902 C e saiBol1.JH378146 507198 0 + 17725628 C e colAng1.NW_012118932v1 528925 0 + 7796314 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=4690.000000 s hg38.chr3_KI270779v1_alt 200368 2 + 205312 GG s panTro5.chr3 200186564 2 + 202621043 GG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144033 2 + 190779 GG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33699 2 - 189199 GG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481008 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 528925 2 + 7796314 GG i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990039 1 - 74750902 -G i calJac3.chr17 C 0 I 1 s otoGar3.GL873829 488099 2 - 608964 GG i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955246 0 + 6579706 C e canFam3.chr33 29120496 5 + 31377067 I e aotNan1.NW_018507959v1 43073 15 - 3732694 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e saiBol1.JH378146 507198 0 + 17725628 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=204941.000000 s hg38.chr3_KI270779v1_alt 200370 73 + 205312 TGTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCCCTGTGATTTCGAGATGGGGA--GAGAAGTC----TGT---- s panTro5.chr3 200186566 73 + 202621043 TGTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCCCTGTGATTTCGAGATGGGGA--GAGAAGTC----TGT---- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144035 73 + 190779 TGTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCCCTGTGATTTCGAGATGGGGA--GAGAAGTC----TGT---- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33701 73 - 189199 TGTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCCCTGTGATTTCGAGATGGGGA--GAGAAGTC----TGT---- i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481010 76 - 91754291 TGTTTCATGCAGCAGTT-GGCAAGGTGGTAACTTCTTCAAGTACTGTGGTTTCGAGGTGTGGA--GAGAAGTC-GTTTGA---- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 528927 77 + 7796314 TGTTTCATGCAGCGGTT-GGCAAGGTGGTAACTTCTCCCAGCACTGTGGTTTCGAGGTGCGGA--GAGAAGCCTGTTTGA---- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990041 74 - 74750902 TGTTTGATGCAGCAGTTCTGCAAGGGGGTAAGTTCTTCAAGCCCTGTGGTTACCAGATGAGGA--GACAAGCC----TGT---- i calJac3.chr17 I 1 I 4 s saiBol1.JH378146 507198 74 + 17725628 TGTTTCATGCAGCAGTTCTCGAAGGTGGTAAGTTCTTCAAGCCCTGCGGTTTCCAGATGAGGA--GACAAGCC----TGT---- i saiBol1.JH378146 C 0 I 4 s aotNan1.NW_018507959v1 43088 74 - 3732694 TGTTTCACGCAGCAGTTCTGCAAGGTGGTAAGTTCTTCAAGCCCTGTGGTTTCCAGATGAGGA--GACAAGGC----TGT---- i aotNan1.NW_018507959v1 I 15 I 4 s otoGar3.GL873829 488101 72 - 608964 CATTTTCTGAAATGATTTTGCAAGATGGTAAGTTCTT-AAGGACAGTGGTTTAGAGA-GAGGA--GAGAAGTC----TAT---- i otoGar3.GL873829 C 0 I 4 s dasNov3.JH569502 3955246 75 + 6579706 -GTTTCGTGCAATGA---CACATGTTGGTAAG-TCTTCATGGACTGTAGTTTAGAAGATAGGGCTGACAGGCC----AGTTGGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e cebCap1.NW_016107444v1 482800 75 - 6778120 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=20096.000000 s hg38.chr3_KI270779v1_alt 200443 4 + 205312 GAGA s panTro5.chr3 200186639 4 + 202621043 GAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144108 4 + 190779 GAGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33774 4 - 189199 GAGA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481086 4 - 91754291 GAGA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 529004 4 + 7796314 GAGA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990119 4 - 74750902 GACA i calJac3.chr17 I 4 C 0 s saiBol1.JH378146 507276 4 + 17725628 GGGA i saiBol1.JH378146 I 4 C 0 s cebCap1.NW_016107444v1 482875 4 - 6778120 GAGA i cebCap1.NW_016107444v1 I 75 C 0 s aotNan1.NW_018507959v1 43166 4 - 3732694 GAGA i aotNan1.NW_018507959v1 I 4 C 0 s otoGar3.GL873829 488177 4 - 608964 GAAA i otoGar3.GL873829 I 4 C 0 s dasNov3.JH569502 3955321 4 + 6579706 GAGA i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=351345.000000 s hg38.chr3_KI270779v1_alt 200447 102 + 205312 ATGCAGTTTTGAGAAGCAGAAGCAATGAGGTCGCATCAG-CCTACTGCCGAGCATAACACACAAGGGCAAAGAAG---------ACGGGGGTCTGGGA-----------------------TTGGA-------GGGCTTCTT s panTro5.chr3 200186643 102 + 202621043 ATGCAGTTTTGAGAAGCAGAAGCAATGAGGTCGAATCAG-CCTACTGCCGAGCATAACACACAAGGGCAAAGAAG---------ACGGGGGTCTGGGA-----------------------TTGGA-------GGGCTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144112 93 + 190779 ATGCAGTTTTGAGAAGCAGAAGCAATGAGGT----------CTACTGCCGAGCATAACACACAAGGGCAAAGAAG---------AAGGGGGTCTGGGA-----------------------TTGGA-------GGGCTTCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33778 102 - 189199 ATGCGGTTTTGAGAAGCAGAAGCAATGAGGTCGAATCAG-CCCACTGCCGAGCATAACACACAAGGGCAAAGAAG---------ACGGGGGTCTGGGA-----------------------TTGGA-------GGGCTTCTT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481090 99 - 91754291 ATGCAATTTTGAGAAGCAGAAGCAATGAGGTTGGGTCGG-CCTACTGCCGAACATAACACACAAGGGCAAAG------------AAGGGGGCCCCGGA-----------------------TCAGA-------GGGCTTCCT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 529008 99 + 7796314 ATGCAGTTTTGAGAAGCAGAAGCAATGAGGCTGAGTCGGCCCTACTGCCGAACATCACACACAAAGGCAAAG-------------AGGGGAACCTGGA-----------------------TCAGA-------GGGCTTCCT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990123 97 - 74750902 ATGCGGTTTTCAGAAG----AATAATGAGGTTGAATCAG-CCCACTGCCGGGCGTAACACACCAGGGCAAAGAAG----------CAGGGGTCCTGGG-----------------------TTGGA-------GGGCTTTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507280 99 + 17725628 ATGCGGTTTTCAGAAGCAGAAGCAATGAGGTTGAATCAG--CCACTGCCGAGCGTGACACATCAGGGCAAAGAAG----------CA-GGGTCCTGGG-----------------------TTGGA-------GGGCTTTCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 482879 100 - 6778120 ATGCGGTTTTCAGAAGCAGGAGCAATGGGGTTGAATCAG-CCCAGTGCCAAGCGTAACACACCAGGGCAAGGAAG----------CAGGGGTCCTGGA-----------------------TTGGA--------GGCTTTCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43170 101 - 3732694 ATGCGGTTTTCAGAAGCAGAAGCAATGAGGTTGAATCAG-CCCACTGCCAAGCGTAACACACCAGGGCAAAGAAG----------CAGGGGTCCTGGA-----------------------TTGGA-------GGGCTCTCC i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 488181 109 - 608964 ATGAGGTTTTGAGAC-CAAAAGCAATGGGACCGAATCAA-CCTCCTACACAATATAACATACAAGGACAAGGAAG---------GGGGGAGTCCTGGAA---------GGACAAT------TTTGA-------GAACTTttt i otoGar3.GL873829 C 0 I 110 s canFam3.chr33 29120501 115 + 31377067 ATGAGGCTTGGAGACTCAGAACCAGCGGTACCGAATCAA-TCTGCTAAAAAGCATAACATGCAAAGGCAAGGAAG---------AGGCATGTCCTGGGC---------AGATATT------TTCGATTCAATCGAGTTTT-- i canFam3.chr33 I 5 C 0 s dasNov3.JH569502 3955325 134 + 6579706 ATGAGCTTTTAAGACACAGAAGCAATAGAACTGAATCAA-CCTACTGAAAAGTAGAAAATACAAGGACAAGTAAAGGTGTGTGGATAGGGCTCCTGCAAGCGTCCCTGGGGCATTTTTTTATTTGA-------AGGCTTTTT i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=786218.000000 s hg38.chr3_KI270779v1_alt 200549 223 + 205312 AAA---ATTCTGACACTAGACCAACTTTCCAAGTTGTTAAAGCCTGCAGACCCCAGATGTAATCTGTCAGTGTGAGAGGAGTTAAATGTCAGCTCCAATATC---TACATTATAATAA---TTGATACAT--------ATTACCTAATAATCAATATATTGTGA--TGTTATATCA-TAGCATTTATTACATACAACACAGTTACTAT----TATATTAGCTTCATCTACATGTGAGATCTGC-TTTT s panTro5.chr3 200186745 223 + 202621043 AAA---ATTCTGACACTAGAGCAACTCTCCAAGTTGTTGAAGCCTGCAGACCCCAGATGTAATCTGTCAGTGTGAGAGGAGTTAAATGTCAGCTCCAATATC---TACGTTATAATAA---TTGATACAT--------ATTACCTAATAGTCAATATATTGTGA--TGTTATATCA-TAGCATTTATTACATACAACACAGTTACTAT----TATATTAGCTTCATCTACATGTGAGATCCGC-TTTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144205 224 + 190779 AAA---ATTCTGACACTAGAGCAACTCTCCAAGTTGTTAAAGCCTGCAGACCCCAGATGTAATCTGTCAATGTGAGAGGAGTTAAATGTCAGCTCCAATATC---TACGTTATAATAA---TTGATACAT--------ATTACCTAATAGTCAATATATTGTGA--TGTTATATCA-TAGCACTTATTACATACAACACAGTTACTAT----TATATTAGCTTCATCTACATGTGAGATCCGCTTTTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 33880 223 - 189199 GAA---ATTCTGACACTAGACCAACTCTCCAAGTCGTTAAAGCCTGCAGACCCCAGATGTAATCTGTCTGTGTGAGAGGAGTTAAACGTCAGCTCCAATATC---TACATTATAATAA---TTGATACAT--------ATTACCTAATAATCAATATATTGTGA--TGTTATATCA-TAGCATTTATTACATACAACACAGTTACTAT----TATATTAGCTTCATCTAAATGTGAGATCCGC-TTTT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481189 222 - 91754291 -AA---GTTCTGACACTAGACCAACCCTCCAAGCTGATAGAGCCTGCAGACCCCAGATGTAATGTGACTGTGTGAGAGGAGTTAAATGTCGGCTCCAATATC---CACATTATAATAA---TTGATACAT--------ATTACCTAATACTCAATACATTGTGA--CGTTATATCA-TAGCATTTATTACATACAACATAGTTATTAT----TATATTAGCTTCATCTAAATGTGAGATCCGC-TTTT i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 529107 222 + 7796314 -AA---ATTCTGACACTAGACCAACCCTCCAAGCCGATACAGCCTGCAGACCCCAGATGTAATGTGACTGTGTGAGAGGAGTTAAATGTCGGCTCCAATATC---CACATTATAATAA---TTGATACAT--------ATTACCTAATAATCAATACATTGTGA--CGTTATATCA-TAGCATTTATTACATACAACACAGTTATTGT----TGTATTAGCTTCATCTAAATGTGAGATCCGC-TTTT i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990220 216 - 74750902 ACGT--ATTCCCAG-CTAGACCAGCTCTCCAGGTTGTCAACGCCTGCAGA-CCCGCATGCAAGCTGACTGTGTGAGAAGAGTTCAATGTAGGCTCCAATATC---CACGTGATAATAA----TGATACAC--------ATTACCTAGTGATCAATATATTGTGA--TGTTATATC---AGCATTTATTACATACAGCACAGTTAC-------TATATTAGCCTTATCTAAATGTAAGATTCAC-TTTT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507379 211 + 17725628 AAAT--ACTCCGAT---------GCTCTCCAGGTTGTCAAAGCCTGCAGA-CCCACATGCAGGCTGACTGCGTGGGAAGAGTTAAACGTGGGCTCCAATATC---TACATGATAGTAA---TTGATACCT--------AGTACCTCATGATCAATATATTGTGA--TGTTATATCA-TAGCATTTATTACATACAACACAGTTAC-------TGTATTAGCCTTATCTAAGTGTGAGATTCAC-TTTT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 482979 223 - 6778120 AAAT--ACTCCGACCCTGGACCAGCTGCCCAGGTTGTCAAAGCCTGCAGA-CCCGCATGCACGCTGGCTGTGTGAGGAGAGTTAAATGTAGGCTCCAATAGC---CACATGATAATGATAATTGATACGT--------ATTACCTCATGATCAATATACTGTGA--TGTTGTATCA-CAGCATTTATTACATACAACACAGTTAC-------TGTATTAGCCTTATCTAAGTGTGAGATTCAC-TTTT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43271 217 - 3732694 AAAT--ATTCCGAG-CTAGACCAGCTCTCCGGGTTGTCCAAGCCTGCAGA-CCCGCATGCAAGCTGACTATGTGAGAAGAGTTAAATGTAGGCTGCAATATC---TACATGATAATAA----TGATACAT--------ATTACCTAATGATCAATATATTGTGA--TGTTATACCA-TAGCATTTATCACATACAACGCAGTTAC-------TCTATTAGCCTTATCTCAATGTGAGA-TCAC-TTTT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 488400 220 - 608964 AAA---GCTCTGTCACTAGACCATCTCAAAGACTAGTTAAAGCCTGAAGGCCTTAGATGCAGTCTGACTGTATGGGAG--TTCAAATGTAGGTGCCAATATCATAAGTATTATAATCA---TTAACATAT--------CTTGCCTACT----AATATGTCAGGATCTGTTATATAA--AGCATATATTACATATAATATAATGGTTA-----TATGTTAGTCTACTTTAGATGTAAGATTAGT-TTTT i otoGar3.GL873829 I 110 C 0 s canFam3.chr33 29120616 200 + 31377067 ---TTTATCCTGACACTAGACCATCTCACAGG-------AAGCCCGCAGACCCTTGATGC--CCTGACTGTGTTGGGAG-TTCAGATGTAGACTCCAATATC---T-TATTAGAATAA---TTAATATGT--------AGTA-----TAATAAATATTGCAACA--TGTGATAGAATTAGCATATTTTATATAGAA-----TTAT-------TGCATTAGCCTAATTTGAATGTGAGATTGGT-TCTT i canFam3.chr33 C 0 I 2 s dasNov3.JH569502 3955459 202 + 6579706 --------TCCCTT-CTGAACTATCTCCCAGAGT----AAAGGTTGCAGGCCCTAGGTGCCACCCATTCGTCAGGAA---TTCAAATTTAGTTTCCAATATC---TATAGTAAAATAA---TGAATATATTCTTATGCATTACCTGATAATTAATATGTAGCGA--T--------A--------CattatatataataaaattattGTGTTATATATTAGCCTAATTTAAGTGTGAGATTGG------ i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=2441.000000 s hg38.chr3_KI270779v1_alt 200772 6 + 205312 T------AAAAA s panTro5.chr3 200186968 6 + 202621043 T------AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144429 6 + 190779 T------AAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34103 6 - 189199 T------AAAAA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481411 6 - 91754291 T------AAAAA i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 529329 6 + 7796314 T------AAAAA i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990436 12 - 74750902 TTTTAAAAAAAA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507590 7 + 17725628 T-----AAAAAC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483202 6 - 6778120 T------AAAAC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43488 7 - 3732694 TTTTTT-----t i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 488620 6 - 608964 T------AAAAA i otoGar3.GL873829 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955661 0 + 6579706 C e canFam3.chr33 29120816 2 + 31377067 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=267729.000000 s hg38.chr3_KI270779v1_alt 200778 105 + 205312 A-CTTACTTtattttttatagagatagggtcttactttgttgcccaggctggtctt--------------------ttttttttttttttttttttt--------tgagacagagtctcactctgttgcccagg- s panTro5.chr3 200186974 103 + 202621043 AACTTACTTtattttttatagagatagggtcttactttgttgcccaggctggtctt--------------------ttttttttttttttttttt-----------gagacagagtctcactctgttgcccagg- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144435 101 + 190779 AACTTACTTtattttttatagagatagggtcttactttgttgcccaggctggttct--------------------ttttttttttttttttt-------------gagacagagtttcactctgttgcccagg- i panPan2.chrUn_NW_014024201v1 C 0 T 6553 s gorGor5.CYUI01000254v1 34109 104 - 189199 A-CTTACTTtattttttatagagatagggtcttactttgttgcccaggctggtctt--------------------tttttgttttgttttgttttt---------gagacagagtctcactctgttgcccagg- i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481417 100 - 91754291 T-CTTAttttagtttttaaagagatagggtctcactttgttgcccaggctGGtctt--------------------ttttttttttttttttc-------------gagacagagtctcgctccgttgcccagg- i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 529335 97 + 7796314 T-CTTAttttagtttttaaagaaatagggtctcactatgttgcccaggcCAGtctt--------------------tttttttttttttt----------------gagacagagtctcgctctgttgcccagg- i colAng1.NW_012118932v1 C 0 C 0 s calJac3.chr17 990448 109 - 74750902 A-AGTAttttatttcttatagagataggatctcactttgttgcccaggctgg------------------------tttatttatttatttatttttaatttttttggcacagagtcttgctctgttgcccagg- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507597 112 + 17725628 a-attattttatttcttatagagataggatctcactttgttgcctaggctggtctt--------------------tttatttatttatttatttttaattttttgag-atagagtcttgctctgttgcccagg- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483208 133 - 6778120 a-attattttacttcttatagagataggatctcactttgctgcccaggctggtctTtttatttatttatttatttatttatttatttatttaCTTTTAGCttttttgagacagcgtcttgctctattgcccagg- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43495 111 - 3732694 a-attattttatttcttatagagataggatctcactttgttgcccaggctggtctt--------------------tttatttatttatttatttttaatttttttgagacagagtcttgctc--ttgcccagg- i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3955661 61 + 6579706 -ATTGGCTTTTTTTTTTAAAAAAAAAAGGGC---------------------------------------------TTT---------------------------AAAGCAGCggagca-tgtgtagctcagtg i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488626 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120816 2 + 31377067 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=735756.000000 s hg38.chr3_KI270779v1_alt 200883 223 + 205312 ctggagtgc------atgatctctctgcctcccggattcaagcgattctcctgcctcaccctcctgagtagctgggattacaggcgtgcgccaccacgcccaggtaatttttgtatttttagtagaaacggggtttcaccatgctggccaggctggtctcaagcccctgacctcaagtgatccacccgcctcggcctcccaaaatgctgggattacaggcatgagccac s panTro5.chr3 200187077 223 + 202621043 ctggagtgc------atgatctctctgcctcccgggttcaagcgattctcctgcctcaccctcctgagtagctgggattacaggcgtgcgccaccacgcccaggtaatttttgtatttttagtagagacggggtttcaccatgctggccaggctggtctcaagcccctgacctcaagtgatccacccgcctcggcctcccaaaatgctgggattacaggcatgaaccac i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 137983 223 + 190779 ctggagtgc------atgatctctctgcctcccgggttcaagcgattctcctgcctcaccctcctgagtagctgggattacaggcgtgcgccaccacgcccaggtaatttttgtatttttagtagagacggggtttcaccatgctggccaggctggtctcaagcccctgacctcaagtgatccacccgcctcggcctcccaaaatgctgggattacaggcatgaaccac i panPan2.chrUn_NW_014024201v1 T 6553 C 0 s gorGor5.CYUI01000254v1 34213 223 - 189199 ctggagtgc------atgatctctctgccgcccgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcacgcaccatcatgcccaggtaatttttgtatttttagtagagacggggtttcaccacgctggccaggctggtctcaagcccctgacctcaagtgatccacccgcctcagcctcccaaaatgctgggattacaggcatgagccac i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481517 223 - 91754291 ctcgagtgc------atgatctgtccgcctcccgggtccaagcgattctcctgcctcggcctcccgagtagctgggattacaggcatgagtcaccacgcccaggtaatttttgcatttttagtagagatggggtttcaccatgttggccaggctggtctcaagcccctgaccacaagtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccac i chlSab2.chr15 C 0 C 0 s colAng1.NW_012118932v1 529432 221 + 7796314 ctcgagtgc------atgatctctctgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgagtcaccacgcccaggtaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcttgacctca--tgatcctcccacctcagcctcccaaactgctaggattacaggcgtgagtcac i colAng1.NW_012118932v1 C 0 N 0 s calJac3.chr17 990557 229 - 74750902 ctggagtgcagcggcacaatctctctgcctcctgagttcaagcaattctcctgcctcagcctcccgagtacctgaagttacaggcaagtgcctccacacacagctcatttttgcgtttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccaccttggcctctcaaagtgctgggattacaggtgtgagccac i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507709 229 + 17725628 ctggagtgcagtggaacaatctctctgcctcctgggttcaagcaattctcctgcctcagcctctcgagtacctgaagttacaggcaggcgccaccacacccagctcatttttgcatttttagtagaggtgaggtttcaccatgttggccaggctgatctcaaactcctgacctcaagtgattcagccgccttggcctctcaaagtactaggattacaggtgtgagccac i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483341 229 - 6778120 ctggagtgcagtggcacaatctctccgcctcctgggttcaagcaattctcctgcctcagcctcctgagtacctgaagttataggcacatgccaccacacccagctcatttttgcatttttagtagagatgaggtttcaccatgttggcaaggctggtctcaaactcctgacctcaagtgatccacccgccttggcctctcaaggtgctgggattacaggcctgagccac i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43606 229 - 3732694 ctggagtgcagtggcacaatctctctgcctcctgggttcaagcaattctcctgcctcagcctcccgagtacctgaagttacaggcacgtgccaccacacccagctcatttttgcatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccaccttggcctctcaaagtgctgggattgcaggtgtgagccac i aotNan1.NW_018507959v1 C 0 C 0 s dasNov3.JH569502 3955722 55 + 6579706 -----------------------------------gttgag------ttcctgcct--------tgtatgtatgaggtcacagg--------------------------ttcaatccctagta-------------------------------------------tgtcct-------------------------------------------------------- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488626 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120816 2 + 31377067 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=29488.000000 s hg38.chr3_KI270779v1_alt 201106 20 + 205312 cacgcct-------------------------------------------------ggccAAGATTCAC s panTro5.chr3 200187300 20 + 202621043 cacgcct-------------------------------------------------ggccAAGATTCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138206 20 + 190779 cacgcct-------------------------------------------------ggccAAGATTCAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34436 20 - 189199 cactcct-------------------------------------------------ggccGAGATTCAC i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481740 20 - 91754291 tgcaccc-------------------------------------------------ggccGAGATTCAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990786 69 - 74750902 tgcgattacagtgtgattacagctgggattacaGGTGTGAATCACAGCTTTTTGAAAGCTGAGATTCGC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 507938 19 + 17725628 tgcccc--------------------------------------------------ggcTGAGATTCAC i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 483570 20 - 6778120 tgcgcct-------------------------------------------------ggcTGAGATTTGC i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018507959v1 43835 20 - 3732694 tgcgcct-------------------------------------------------ggcTGAGATTCAC i aotNan1.NW_018507959v1 C 0 C 0 e otoGar3.GL873829 488626 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e dasNov3.JH569502 3955777 0 + 6579706 C e canFam3.chr33 29120816 2 + 31377067 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=18536.000000 s hg38.chr3_KI270779v1_alt 201126 10 + 205312 TT---AAAAAAAA s panTro5.chr3 200187320 10 + 202621043 TT---AAAAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138226 10 + 190779 TT---AAAAAAAA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34456 10 - 189199 TT---AAAAAAAA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481760 13 - 91754291 TTACAAAAAAAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990856 10 - 74750902 TT---CAAAAAGA i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 507958 10 + 17725628 TT---CAAAAAAA i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 483591 10 - 6778120 TT---CAAAAAAA i cebCap1.NW_016107444v1 I 1 C 0 s dasNov3.JH569502 3955777 7 + 6579706 ------aaaagaa i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488626 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120816 2 + 31377067 I e aotNan1.NW_018507959v1 43855 0 - 3732694 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=-11190.000000 s hg38.chr3_KI270779v1_alt 201136 5 + 205312 --AAAAC s panTro5.chr3 200187330 4 + 202621043 --AAA-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138236 4 + 190779 --AAA-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34466 5 - 189199 --AAAAC i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481773 5 - 91754291 --AAAAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990866 1 - 74750902 --A---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507968 1 + 17725628 --A---- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483601 1 - 6778120 --A---- i cebCap1.NW_016107444v1 C 0 C 0 s canFam3.chr33 29120818 3 + 31377067 --AAA-- i canFam3.chr33 I 2 C 0 s dasNov3.JH569502 3955784 5 + 6579706 aaAAA-- i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 488626 0 - 608964 C e mm10.chr16 65480155 1891 - 98207768 I e aotNan1.NW_018507959v1 43855 0 - 3732694 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=4995.000000 s hg38.chr3_KI270779v1_alt 201141 2 + 205312 TG- s panTro5.chr3 200187334 2 + 202621043 TG- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138240 2 + 190779 TG- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34471 2 - 189199 TG- i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481778 2 - 91754291 TG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990867 2 - 74750902 TG- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507969 2 + 17725628 TG- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483602 2 - 6778120 TG- i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 488626 2 - 608964 TG- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29120821 2 + 31377067 TG- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955789 2 + 6579706 -GG i dasNov3.JH569502 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e aotNan1.NW_018507959v1 43855 0 - 3732694 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=548194.000000 s hg38.chr3_KI270779v1_alt 201143 200 + 205312 CTTTAAAAACATTCATAAGCCGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACA-CGCAGGAGCAGCCAATCCCCAAAGCCCTGGTCACGTGATGAC----AATTAGGCCACCTACCCTCCGTTATTCTGGCCCCTCTG----CCAAGAGGCA----GGCCCTCACCCAACTGACCCTACCAGC-GCAGGGGCCTGAGTGCGGC s panTro5.chr3 200187336 200 + 202621043 CTTTAAAAACATTCATAAGCTGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACA-CGCAGGAGCAGCCAATCCCCAAAGCCCTGGTCACATGATGAC----AATTAGGCCACCTACCCTCAGTTATTCTGGCCCCTCTG----CCAAGAGGCA----GGCCCTCACCCAACTGACCCTACCAGC-GCAGGGGCCTGAGTGCGGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138242 200 + 190779 CTTTAAAAACATTCATAAGCTGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACA-CGCAGGAGCAGTCAATCCCCAAAGCCCTGGTCACATGATGAC----AATTAGGCCACCTACCCTCAGTTATTCTGGCCCCTCTG----CCAAGAGGCA----GGCCCTCACCCAACTGACCCTACCAGC-GCAGGGGCCTGAGTGCGGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34473 204 - 189199 CTTTAAAAACGTTCATAAGCCGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACA-TGCAGGAGCTGCCAATCCCCAAAGCCCTGGTCACGTGATGAC----AATTAGGTCACCTACCCTCAGTTATTCTGGCCCCTCTG----CCAAGAGGTCAGTTGGCCCTCACCCAACTGACCCTACCAGC-GCAGGGGCCTGAGTGCAGC i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481780 199 - 91754291 CTTTAAAAACGTTCCTAAGTCGTTACTGCCTGG-GAGTCCCTGAATGTGTCACACCCTTTAACA-CACGTGGGCAGTCAACCCCCAAAGCCCTGGTCACGTGACGAC----AATTAGGCCACCCACCCTCCGTTATTCTGGCCCCTGTG----CCAAGAGGCA----GGCCCTCACCCAACTCCCCCTACCCGC-CCGGGCGCCTGAGCGCGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990869 182 - 74750902 CTTTGAAAACATTCATAAGCCATCATTGCCTGGGGAGT--CTGAATGTCTGATGCCCTTTAACA-CGTATGGGCCACTAACCTCCAAACCCC-GGTCACGTGACGAC----AATTAGGCCACCTACCCTCAGTTATTCTGGCCCCTCTG----CCAGGAGGCG----GGCCCT---------------ACCAGC-AGAGGCGCCTGAGTGCGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 507971 187 + 17725628 CTTTGAAGACATTCATAAGCCGTCATTGCCTGGGGAGTCCCTGAATGTCTGATGCCCTTTAACGTTGCATGGGCCACTAACCCCCAAACCCCTGGTCACGTGATGAC----AATGAGACCACCTACCCTCAGTTACTCTGGCCCCTCTG----CCGGGAGACC----GGCCCTA--------------ACCAGC-AGAGGGGCCTGAGTGCGGC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483604 185 - 6778120 CTCTGAAAGCATTCATAAGCCATCATTGCCTGGGGAGTCTCTGAATGTCTGACGTCCTTTAACA-CGCATGGGCCACTAGCCCCCAAACCCCTGGTCACGTGACGAC----AATTAGGCCACCTACCCTCAGTTATTCTGGCCCCTCTG----CCAGGAGGCG----GGCCCT---------------ACCAGC-GGAGGGGCCTGAGTGTGGC i cebCap1.NW_016107444v1 C 0 C 0 s otoGar3.GL873829 488628 200 - 608964 TTTTTAAAAATTTCATGAGCTGCTATTACCTGTGGAGTTCTTGAATGTCTAATCCCCTTTAACA-GGCCCGGGCAGATGAACCCTTAAACCCTAATCACCCTGAGAC----AATTAGGCCACCTATCCACAGTTAGTTTGGCCCCTCTG----CTCAAGGGCA----ATCTCACACTCAACTGACCCTCCCAGC-TGTAGAGCCTGAAGACAGC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65482046 167 - 98207768 CTTTTAAAAGAT------GCTGTTATTGCTTGAGGTGGCCCTGAATGTCTGATGCTTCTTAACA-TGTCTGGGCAGTGACACCTCAAGCCCCAGGTTCCCTTGAGGC----AATTAAGCCAACTGCCCTAGGTTAACTGGGCCCTCCCGCCTCCCAGGTGACA------CCTTCA------------------------GGGTCTGTG------ i mm10.chr16 I 1891 C 0 s canFam3.chr33 29120823 169 + 31377067 CTTTCAAAGTTTTCACGA-CTGTTCTTGCCTGGAGAGCCCCTGAACGTACGATTCTCTTTAGCA-GGTCTGCA-AGCCAAAGCCCAAGCCCCTGGTCCCTCCGAGGC----TATCAAGCCACCCACCCTT-GTTAATTT-GTCCCTCTG----CCAAGA--CA----GGT------------------ACCCGCTGCAAGGCCCTG-------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955791 171 + 6579706 CTTTAGAAGTTTTCATAAGCTGTTTTGGCCTGGGGAGCCTCTAAGTGTTTGATTCTCTTTAAGG-GACAGCAGCAGTCAGTTCCCAAATCCCTGGTTATCCTGATACATAAAATTAAGCCACCTGCTCTCAATT----TGGTCCCTCCA----CCAAGAGCCA----GGACCTTTCCCAGCTGA------------------------------ i dasNov3.JH569502 C 0 C 0 e aotNan1.NW_018507959v1 43855 0 - 3732694 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=700837.000000 s hg38.chr3_KI270779v1_alt 201343 247 + 205312 TCTCCAAAGAAACTTGATGTT---------GGCATTCAGCC---ACAAG-------------------CCCGGCTCTCAGAGGAACCTGG------TGTGGG------------------AAAGAC-GCCCCACCTCCAGCCCCTGTGC---CGTCAGAGTCAAGATCACTGTACTTTGCATAAAGTATTAGGAA---AAAACCCAAATTCTTGCTCTTTGATTAGAGCCTCTCCTTCTTTCCCCACCAGCCCTCTGCAGAAGCAAGAGGCAAAAC-TAAAA----CTCAG--GTGTTTTTATCC------GTGAGTCTGTG s panTro5.chr3 200187536 247 + 202621043 TCTCCAAAGAAACTTGACGTT---------GGCATTCAGCC---ACAGG-------------------CCCGGCTCTCAGAGGAACCTGG------TGTGgg------------------aaagac-gccccacccccagcccctgtgc---cgtcagagtcaagatcactgtactttgcataaagtattaggaa---aaaacccaaattcttgctctttgattacagcctctccttctttccccaccagccctctgcagaagcaagaggcaaaac-taaaa----ctcag--gtgtttttatcc------gtgagtctgtg i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138442 247 + 190779 TCTCCAAAGAAACTTGACGTT---------GGCATTCAGCC---ACAAG-------------------CCCGGCTCTCAGAGGAACCTGG------TGTGGG------------------AAAGAC-GCCCCACCTCCAGCCCCTGTGC---CGTCAGAGTCAAGATcactgtactttgcataaagtattaggaa---aaaacccaaattcttgctctttgattagagcctctccttctttccccaccagccctctgcagaagcaagaggcaaaac-taaaa----ctcag--gtgtttttatcc------gtgagtctgtg i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34677 252 - 189199 TCTCCAAAGACACTGGATGTT---------GGCATTCAGCC---ACAAG-------------------TCCGGCTCTCAGAGGAACCTGG------TGTGGG------------------AAAGAT-GCCCCACCTCCAGcccctgtgc---cgtcagagtcaagatcactgtactttgcataaagtattagg-a---aaaacccaaattcttgctctttgattagagcctctccttctttccccaccagccctctgcagaagtgagaggcaaaac-taaaa----ctcag--gtgtttttatccgtatctgtgagtctgtg i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 481979 245 - 91754291 TCTCCAAAGAAACTGGATGCT---------GACGTTCAGTC---ACAAG-------------------CCCAGCTTTCAGAGGAACCTGG------GGTGGG-------------------AAGAC-ACCGCACCTCCAGCCCCTGTGC---CGTCGAAGTCGAGATCACGGTACTTCGCCTAAAGTACTAGGAA---ACAACT--AATTCTTGCTCTTTGATTAGAGTCTC-----CTTTCCCCACCAGCCCTCTGCAGAAGCCAGAGGCAAAAC-TAAAG----CTCAC--GTGTTTCTATGCGTATCTGTGAGTCTGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991051 250 - 74750902 TCTCCAAAGAAACAGGGTGTT---------GACACTCAGCC--TATAAA-------------------CCCAGCTTTCAGAGGAACCTGG------TGTGGG------------------AAAGAC-ACCGCACCC------CCTCTGC---TGTCACAGTAAAGATCACCGCACTTTGCCTAAAGTATTAGAAACAGGAAACCCAAATTCTCGCTCTTTGATTCAAGCCTCTCCTTCTTTCCCCACCAGCCCTCTGCAGAAGCAGGAGGCAAAACTTAAAA----CTCAC--GTGTTTTTATCTGTA--TGTGAGTCTGTG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508158 228 + 17725628 TCTCCAAAGAAACAAGATGTT---------GACATTCAGCC--CATAAA-------------------CCCAGCTTTCAGAGGAACCTGG------TGTGGG------------------AAAGAC-ACCCCACCT------CCTATGC---TGCCAGAGTAAAGATCACTGTACTTTGCCTAAGGTATTAGAAACATGAAACCCAAATTCTTGCTCTTTGATTCAAG-----------------------CCTCTGCAGAAGCAGGAGGCAAAAC-GAAAA----CTCAC--GTGTTTTTATCTGTGTCTATGAGTCTGTG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 483789 228 - 6778120 TCTCCAAAGAAACAGGATGTT---------GACATTCAGCC--CATAAG-------------------CCCAGCTTTTAGAGGAACCTGG------TGTGGG------------------AAAGAC-ACCCCACCT------CCTATGC---TGTCAGAGTAAGGATCACTGCACTTTGCCTAAAGTATTAGAAACATGAAACCCCAATTCTTGCTCTTGGAGTCAAG-----------------------CCTCTGCAGAAGCAGGAGGCAAAGC-TAAAA----CTCAG--GTGTTTTCATCTGTATCTGTGAGTCTGTA i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 43855 247 - 3732694 TCTCCAAAGAAACAGGATGTT---------GCCATTCAGCC--CATAAA-------------------CCCAGCTTTCAGA-GAACCTGG------TGTGGA------------------AAAGcc-accccgcct------cctgtgc---tgtcagagcagagatcacggtactttgcctaaagtattagaaacatgaaacccgaattctggctctttgattcaag---cctctcctttccctaccagccctctgcagaagcaggaggcaaagc-taaaa----ctcac--gtgtttttatctgtatctgtgagtccgtg i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 488828 252 - 608964 TCGTCAAAGAAACAGGATGTT---------GGCATTCAGCC--TACAAGGACAGGGCTGGCTGAGGGCCCTGGTGTTGGGGGGGCCCTGG------TGTCGG------------------AAAGAC-ACCCCATCC-TAGCCCCCATGC---CATGGGAGTAAATATCACTATACCTTGCTTAAATTATCAAGAACATGAAACCCAAACTCTCACTGTTTGGTTAGAGCCTCTC-----------------CTTTAGCAAGAATGAAAGGGAAAAT-TGAAA----CTTGT--Atttttttgttt------gtttgtttttg i otoGar3.GL873829 C 0 I 662 s mm10.chr16 65482213 199 - 98207768 ---------AAGCCGAATGTCAAATGTCGGGGCTTCTGGCCTGCAAAGG-------------------CCTGGCTTTCTGAGAACTCTGG-----CTGTAGA------------------GAAGAC-AGTTCACCTCAGGCC------------TCAGAGTAAAGGCCACT-CACTCTGCCTCCAATATT--------AATCCTCAACTTCTG-----TTGAGTA------------------------------TTCAGAA-TGAGAGGTCAGAT-GAAAAGCCCCTCAT--G---TTCTATACATTTCTACA-------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29120992 208 + 31377067 ------------------------------------------------------------------------GCTTTCTGAGGACACTGA-----CTATGGG------------------AAAACCTACCCCACTG--CACCCCGGGGC---CATCAGAGTAAAGATCCCTGCA-TTTACTTAAAGTATTAAGAACATGAACCC---AACCCTGTTGTTTGGTTTGAACCTC---TTCCTTCTCCGCCAGCCCCACGTAGGAGAAAGAGACAAGAT-TAACA----TTTGC-TATGATTTCATTCATCTCT-TGAGTCTGTG i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3955962 276 + 6579706 --TCCCGAGCCACAGGATGTT---------AACTTTCAGGCTGCAAGGA-------------------CCTGGCTTTCTGCAAACACTGGCTATCCTGAAGGATCCCCCGATTCACACACACACAC-ACCCCCGCTTCAGTCCCCCAACCTTCATCAGAGCAAAGATCACTGTCCTTTGCCTAAA-TACTGAGAACGGAAAACCCACACTCT-GTTCTTTGGTTGGAACTGCTTCTCCTGTCCCTACCAGCCCTTGGCAGGAATGAGCAGCAAAAT-TAAAA----TTCACTTGTGTTTTCATCTACATCTGTG-------- i dasNov3.JH569502 C 0 C 0 e nomLeu3.chr11 120951642 0 + 123690457 C a score=111493.000000 s hg38.chr3_KI270779v1_alt 201590 33 + 205312 TTTCTGTGT-AAGTGATCTATGCATTTAAAAACC s panTro5.chr3 200187783 33 + 202621043 tttctgtat-aagtgatctatgcatttaaaaacc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138689 33 + 190779 tttctgtat-aagtgatctatgcatttaaaaacc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34929 33 - 189199 tttctgtat-aagtgatctatgcatttaaaaacc i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482224 33 - 91754291 TTTCTGTAT-AAGTGATCAATGCATTTAAAAACC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991301 33 - 74750902 TTTCTACAT-AAATGATCAGCGCATTTAAAACAC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508386 33 + 17725628 TTTCTACATAAAATGATCAATGCATTTAAAA-GC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484017 32 - 6778120 TTTCTACAT-AAATGATCAATGCATTTAAAA-AC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44102 33 - 3732694 tttctacat-aaatgatcgatgcatttaaaaaac i aotNan1.NW_018507959v1 C 0 C 0 s mm10.chr16 65482412 22 - 98207768 CATCTGTAT------------GCATTAAAGAACA i mm10.chr16 C 0 I 2 s canFam3.chr33 29121200 31 + 31377067 TTTCTGTAT-AAATGGCCGATGCATTAAAGAA-- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3956238 33 + 6579706 TTTCTGCAT-AAACGATCAATGCATTTAATAAAC i dasNov3.JH569502 C 0 C 0 e otoGar3.GL873829 489080 662 - 608964 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=673536.000000 s hg38.chr3_KI270779v1_alt 201623 186 + 205312 ---AATAACTTACTTTATCCTTCTCAGGACCTGAAGTATGGTCTTTCATCAGATGCCTACAGAGGGT-AGGAAGGCCAGGAAGAGGTGGGGAGGGCAGGAGGGGAGCGCTGAACAAATGTAGAGGTTGGATCCAGGCGTGCGGATCAGACCTTGAACTAAGGAGCCATGG-AGAGCACA---------------------------------------------------GAGCCCCCAGGG s panTro5.chr3 200187816 187 + 202621043 ---aataacttactttatccttctcaggacctgaagtatggtctttcatcagaTGCCTACAGAGGGTTAGGAAGGCCAGGAAGAGATGGGGAGGGCAGGAGGGGAGCGCTGAACAAATGTACAGGTTGGATCCAGGCGTGCGGATCAGACCTTGAACTAAGGAGCCATGG-AGAGTGCA---------------------------------------------------GAGCCCCCAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138722 187 + 190779 ---aataacttactttatccttctcaggacctgaagtatggtctttcatcagaTGCCTACAGAGGGTTAGGAAGGCCAGGAAGAGATGGGGAGGGCAGGAGGGGAGCGCTGAACAAATGTACAGGTTGGATCCAGGCGTGCGGATCAGACCTTGAACTAAGGAGCCATGG-AGAGTGCA---------------------------------------------------GAGCCCCCAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 34962 187 - 189199 ---aataacttactttatccttctcaggacctgaagtatggtctttcatcagaTGCCTGCAGAGGGTTAGGAAGGCCAGGAAGAGGTGGGGAGGGCAGGAGGGGAGCGCTGAACAAATGTACAGGTTGGATCCAGGCGTGCGGATCAGACCTTGAACTAAGGAGCCATGG-AGAGTGCA---------------------------------------------------GAGCCCCCAGGG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482257 186 - 91754291 ---AGTAACTTACTTTATCCTTCTCAGGACCTGAAGTATGGCCTTTCATCAGATGCCTACAGAGGGTGAGGAAGG-CAGGAGGAGGTGCAGAGGGCAGGAGGGGAGCACTGAGCAAATGTACAGGTTGGATCCAGGCGTGCGGACCAGATGTTGAGCCAAGGAGCCACAG-AGAGCGCA---------------------------------------------------GAGCCCCCAGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991334 186 - 74750902 ---AATGACTGACTTTATCCTTCTCAGGACCTGAGGTACGGTCTTTCAACAGACGCCTACAGAGGGAGAGGAAGGCAAGGAGGAGGTGGGGAGGGCAGGAGGGGAGTGCTGAGCAAATGGACAG-TGGGGTCCAGGCGTGCGGACCAGACCCTGAACTCAGGAACCACGG-AGAGCGCA---------------------------------------------------GAGCCCCCAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508419 237 + 17725628 ---AGTGACTTCCTTTACCCTTCTCAGGACCCGAGGTATGGTCCTTCATCAGATGCCGACAGAGGGTGAAGAAGGCGAGTAGGAGGTGGGGAGGGCTGGAGGGAAGTGCTGAGCGAGTGTACAG-CGGGGTCTAGGAGTGCGGGCCAGACCTGGGACTCAGAAACCATGG-AGAGCGCAGAGCCCCCCGCGAACCGGAAGATAGTTGTCCTGGGCAGAGGGTGGCCCCAGGAGCCCCCAGGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484049 184 - 6778120 ---AATGACTTACTTTA-CCTTCTCAGGACCCAAGGTTTGGTCTTTCATCAGCTGCCTACAgagggtgaggaaggccaggaggaggtggggagggcaggaggggagTGCTAAGCAAATGTGCAG--GGGACCCAGGCGTGTGGACCAGACCTTGGACTCAGGAACCATGG-AGAGCGCA---------------------------------------------------GAGTCCCCAGGG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44135 186 - 3732694 ---aatgactgactttatccttctcaggacccgagatatggtctttcatcagaTGCCTACAGAGGGTGAGGAAGGCAAGGAGGAGGTGGGGAGGGCAGGAGGGGAGTGCTGAGCAAATGGACAG-GGGGATCCAGGCATGCGGACCAGACCTTGAACTCAGGAACCACGG-AGAGCGCA---------------------------------------------------GAGCCCCCAGGG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 489742 186 - 608964 ---AATAACTTCTCTTATCCATCTCAGGACCTAACATATGGTCTCTTATCAGGTAAATACAGAGGGTGAGAAAGGCAAGGAGGAAATGTGGAGGTCCAAGTGGGAATGCTGAGCAAATTTGCAGGTTCAATTCAGGCATATGGATCTGACCTTGAACCAAGGAACCGTGGAAAAGTGCA-----------------------------------------------------GTCTTCAGGG i otoGar3.GL873829 I 662 C 0 s mm10.chr16 65482436 171 - 98207768 ---AGCAA-----TGTGTCTTCCTCAGGGCCTTAAGTCTGTGTTTCTGTCCCACACATA---AAGGTAAGGAAAGCCAGCAGGAAGTGGGGCAGCCAGCTGGGAAGTGCTAAGCACGCTCGCAAGTTCTATTCGGGCTTGGGGCTCAGATCTTGAA--------CCACTG-AGGGGACT---------------------------------------------------AGGTTCATAGGC i mm10.chr16 I 2 C 0 s canFam3.chr33 29121231 149 + 31377067 ----AAGACTCCTTGTACCCTTCTCAGGGCC--GAACATGGCCTTTCATCAGAGGAATACAGGGGGTGAGGAAGGCAAGAAGGAAATGGGGAGAGCAGGCGGGGAGCGCTGGACAAACTTACAGGCCCG-CTCAGGCGTCTGCTCAAGGCCACAGG-------------------------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 s dasNov3.JH569502 3956271 165 + 6579706 AACAGAGACTTGCTTCACCCTTCTCACTACCTCAAATCCAGTCTTTTATCAGATGATTGCAGCAGGTCAGG-AGACCAGGAGGA------------------GAGGAGCTGGGTGAATTTACAGGCTCCGTGCAGGCAT-CAGCCCAGCCCCTGCACT-----GCTGGAG-GCTGGGCA---------------------------------------------------GGGCCACCAGGG i dasNov3.JH569502 C 0 N 0 e nomLeu3.chr11 120951642 0 + 123690457 C a score=21840.000000 s hg38.chr3_KI270779v1_alt 201809 12 + 205312 ACACGGGAAGAC s panTro5.chr3 200188003 12 + 202621043 ACACGGGAAGAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138909 12 + 190779 ACATGGGAAGAC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35149 12 - 189199 ACACGGGAAGAC i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482443 12 - 91754291 ACTCGAGAAGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991520 11 - 74750902 A-ACGGGAAGAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508656 11 + 17725628 A-ACGGGAAGAT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484233 11 - 6778120 A-ACCGGAAGAT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44321 11 - 3732694 A-ACGAGAAGAT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 489928 12 - 608964 ACTGAGGAAGAC i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65482607 11 - 98207768 T-CTGGAAAGGC i mm10.chr16 C 0 I 2 e canFam3.chr33 29121380 0 + 31377067 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=67214.000000 s hg38.chr3_KI270779v1_alt 201821 17 + 205312 GGTTGTCCTGGGTAGAT s panTro5.chr3 200188015 17 + 202621043 GGTTGTCCTGGGTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138921 17 + 190779 GGTTGTCCTGGGTAGAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35161 17 - 189199 AGTTGTCCTGGGTAGAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951642 17 + 123690457 GGTTGTCCTGGGTAGAT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 482455 17 - 91754291 GGTTGTCCTGGGTAGAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991531 17 - 74750902 AGTTGTCCTGGGCAGAG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508667 17 + 17725628 GGTTGTCCTGGGCAGAG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484244 17 - 6778120 GGTTGTCCTGGGCAGAG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44332 17 - 3732694 GGTTGCCCTGGGCAGAG i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 489940 15 - 608964 AGTTATCCTGGCTGA-- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65482620 17 - 98207768 TCCCGTCTAGGGTGGAT i mm10.chr16 I 2 I 464 e canFam3.chr33 29121380 0 + 31377067 C a score=81362.000000 s hg38.chr3_KI270779v1_alt 201838 25 + 205312 GGCAGCTCC---------------------------------------------------AGAAGCCCCCAGCTGT s panTro5.chr3 200188032 25 + 202621043 GGCAGCTCC---------------------------------------------------AGGAGCCCCCAGCTGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138938 25 + 190779 GGCAGCTCC---------------------------------------------------AGGAGCCCCCAGCTGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35178 25 - 189199 GGCAGCTCC---------------------------------------------------AGGAGCCCCCAGCTGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951659 25 + 123690457 GGCAGCTCC---------------------------------------------------AGGAGCCCCCAGCTGT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 482472 25 - 91754291 GGCAGCTCC---------------------------------------------------AGGAGCCCCCAGCTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991548 25 - 74750902 GGCAGTCCC---------------------------------------------------AGGAGCCCCCAGCTGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508684 76 + 17725628 GGCGGCCCCAGGAGCCCCCAGGGAATGGGAAGATGGTTTTCCTGGGCAGAGGGTGGCCCAAGGAGCCCCCAGCTGG i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484261 25 - 6778120 GGCAGCCCC---------------------------------------------------AGGAGCCCCCAGCTGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44349 25 - 3732694 GGCAGCCCC---------------------------------------------------AGGAGCCCCCAGCTGT i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 489955 25 - 608964 GGTAGATCA---------------------------------------------------GGACACTAGCAGTTGT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29121380 12 + 31377067 -------------------------------------------------------------GAAGGCC---GCTGT i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I a score=429932.000000 s hg38.chr3_KI270779v1_alt 201863 138 + 205312 GCCTCATCAGGCCCATGCTGAGACTACGGTCTCCTCTGCCCAGGAGGGCCACAGACAAGTGGAGAAAGCAGAAAAGCAGGGCCTGGGTGGCGCTGGCCTCACCTGCCTCCATGAGGCGGACA-GGAGCCTCGCAGCCGT s panTro5.chr3 200188057 138 + 202621043 GCCTCATCAGGCCCATGCTGAGACTACGGTCTCCTCTGCCCAGGAGGGCCAAAGACAAGTGGAGAAGGCAGAAAAGCAGGGCCTGGGTGGCGCTGGCCTCACCTGCCTCCATGAGGCGGACA-GGAGCCTCGCAGCCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 138963 138 + 190779 GCCTCATCAGGCCCATGCTGAGACTACGGTCTCCTCTGCCCAGGAGGGCCAAAGACAAGTGGAGAAGGCAGAAAAGCAGGGCCTGGGTGGCGCTGGCCTCACCTGCCTCCATGAGGCGGACA-GGAGCCTCGCAGCCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35203 110 - 189199 GC----------------------------CTCCTCTGCCCAGGAGGGCCAAAGACAAGTGGAGAAAGCAGAAAAGCAGGGCCCGGGTGGCGCTGGCCTCACCTGCCTCCATGAGGCGGACA-GGAGCCTCGCAGCCGT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951684 138 + 123690457 GCCTCATCAGGCCCATGCTGAGACTACCGTCTCCTGTGCCCAGGAGGGCCAAAGACAAGTGGAGAAAACAGAAAAGCAGGGCCTGGGTGGCACCGGCCTCACCTGCCTCCATGAGGCAGACA-GGAGCCTTGCAGCTAT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 482497 138 - 91754291 GCCTCATCAGGCCCATGCCGAGACCACCCTCTCCCCTGCCCAGGAGGGCCAAAGACATGTGGAGAAAACAGAAAAGCAGGGCCCAGGTGGTGCTCGCCACACCTGCCTCCACGAGGCGGGCA-GGAGCCTCGCAGCCAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991573 137 - 74750902 GCTTCATCAGGCCCATGCTGAAACCATCCTCTCCCCAGCCCAGGAGGGCCATAGAAAAGTAGAGAAAGCAGAAACGCAGGGCCCAGATGGCACGGGCCACACCTGCCTCCATGAGGCAGACA-AGAGCCT-ACAGCCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 508760 137 + 17725628 GCTTCATCAGGCCCATGCTGAGACCATCCTCTCCTCGGCCCAGGAGGGCCACAGAAAAGTAGAGAAAGCAGAAAAGCAGAGTCCAGGTGGTGCGGGCCACACCTGCCTCCATGAGGCAGACA-GGAGCTT-GCAGCCGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484286 137 - 6778120 GCGTCATCAGGCCCATGCTGACCCCATCCTCTCCCCGGCCCAGGAGGGCCACAGAAAAGTAGAGAAAGCAGAGAAGCGGGGTCCAGGTGGCGCGGGCCACACCTGCCTCCATGAGGCAGACA-AGAGCCT-ACAGCCGT i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44374 137 - 3732694 GCTTCTTCAGGCCCATGCTGAGACCATCCTCTCCCCAGCCCAGGAGGGCCACAGAAAAGTAGAGAAAGCAGAAAAGCGGGGTCCAGGTGGCGCGGGCCACACCTGCCTCCGTGAGGCAGACG-AGAGCCT-ACAGCCGT i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29121392 65 + 31377067 -------------------------------------------------------------------------GGGCAGGGTCCCTGGGGCACAGGACAGGCCT-CCTGATGGGGGCAGACAGGGAGTCGGGGCGCTGG i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 489980 0 - 608964 C e mm10.chr16 65482637 464 - 98207768 I a score=293482.000000 s hg38.chr3_KI270779v1_alt 202001 76 + 205312 GGACGCAGCCCAGGCCAAGCCATGCAGGGAGTAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCT-TT-----GGC s panTro5.chr3 200188195 76 + 202621043 GGACGCAGCCCAGGCCAAGGCATGCAGGGAGTAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCT-TT-----GGC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139101 76 + 190779 GGACGCAGCCCAGGCCAAGGCATGCAGGGAGTAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCT-TT-----GGC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35313 76 - 189199 GGACACAGCCCAGGCCAAGGCATGCAGGGAGTAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCT-TT-----GGC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951822 81 + 123690457 GGACTCAGCCCAGGCCAGGGCATGCAGGGAGTAGTGACAAGAATAAATGAAGCTGTGAAGCCAGGGCTCCT-TTGGCAGGGC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 482635 81 - 91754291 GGACTCAGCCCCGGCCAGGGCATGGAGGGAGCAGTAACAAGAATGAATGAAGCCGTGAAGCCAGGGCCCCT-CTGGCAGGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991710 76 - 74750902 GAACTCAGCCCAGGCCAGGGCATGGAGGGCACAGTAACAAGAATAAATGAAGCTTCGAAACCAGGGCCCCT-TT-----GGC i calJac3.chr17 C 0 I 5 s saiBol1.JH378146 508897 76 + 17725628 GAACTCAGCCCAGGCCAGGGCATGGAGGGCACAGTAACAAGAATAAATGAAGCTGTGAAACCAGGGTCCCT-TT-----GGC i saiBol1.JH378146 C 0 I 5 s cebCap1.NW_016107444v1 484423 76 - 6778120 GAACTCAGCCCAGGCCAGGGCATGGAGGGCACAGTAACAAGAATAAATGAAACTGCGAAACCAGGGCCCCT-TT-----GGC i cebCap1.NW_016107444v1 C 0 I 34 s aotNan1.NW_018507959v1 44511 76 - 3732694 GAACTCAGCCCAGGCCAGGGCATGGAGGGCACAGCAACAAGAATAAATGAAGCTGCGAAACCAGGGCCCCT-TT-----GGC i aotNan1.NW_018507959v1 C 0 I 38 s otoGar3.GL873829 489980 72 - 608964 GGACCCAACCCAGGCAAGGG--GGGAAGGAGTGTTAACAAGAATAAATGAAGCAGTGAAG--GGTGTTTGT-TT-----CAT i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29121457 62 + 31377067 GGAGGCAACTCTGGGGTGCGGGTGAAGGGAGTGCCTGTGGG---------------GAAGCCAGAGCCCTTGTC-----AGC i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I a score=10651.000000 s hg38.chr3_KI270779v1_alt 202077 15 + 205312 GCTT-----GTGCAACCGCC s panTro5.chr3 200188271 15 + 202621043 GCTT-----GTGCAACCGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139177 15 + 190779 GCTT-----GTGCAACCGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35389 15 - 189199 GCTT-----GTGCAACCGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120951903 15 + 123690457 ACTT-----GTGCAACCGCC i nomLeu3.chr11 C 0 M 1779 s chlSab2.chr15 482716 15 - 91754291 GCTT-----GTGCAACTGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991791 15 - 74750902 GCGT-----GTTCCATGAGC i calJac3.chr17 I 5 I 1 s saiBol1.JH378146 508978 15 + 17725628 GCAT-----GTTCAGTGAGC i saiBol1.JH378146 I 5 I 1 s otoGar3.GL873829 490052 6 - 608964 GCTT-----CC--------- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29121519 18 + 31377067 GCACTAGGAGTTTAATGT-- i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44587 38 - 3732694 I e cebCap1.NW_016107444v1 484499 34 - 6778120 I a score=17390.000000 s hg38.chr3_KI270779v1_alt 202092 13 + 205312 AACCTGCGTAGTT s panTro5.chr3 200188286 13 + 202621043 AACCTGCGTAGTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139192 13 + 190779 AACCTGCGTAGTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35404 13 - 189199 AACCTGCGTAGTT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482731 13 - 91754291 AACCTGCGAAGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991807 12 - 74750902 A-CCTGCATAGCG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 508994 13 + 17725628 ACCCTGCACGGCG i saiBol1.JH378146 I 1 C 0 s otoGar3.GL873829 490058 13 - 608964 AACTTTCCTGGCA i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29121537 13 + 31377067 GGCCTGAGTGGCA i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44587 38 - 3732694 I e cebCap1.NW_016107444v1 484499 34 - 6778120 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=24612.000000 s hg38.chr3_KI270779v1_alt 202105 13 + 205312 CTGTGAGCACTGG s panTro5.chr3 200188299 13 + 202621043 CTGTGAGCACTGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139205 13 + 190779 CTGTGAGCACTGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35417 13 - 189199 CTGTGAGCACTGG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482744 12 - 91754291 CTGTGAGAACT-G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991819 13 - 74750902 CTGTGAGCACGGT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509007 13 + 17725628 CTGTGAGCACGGT i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484533 13 - 6778120 CTGTGAGCACGGT i cebCap1.NW_016107444v1 I 34 C 0 s otoGar3.GL873829 490071 11 - 608964 CTATAAGAAAC-- i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29121550 13 + 31377067 CCATGAGAAATGT i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44587 38 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=81238.000000 s hg38.chr3_KI270779v1_alt 202118 22 + 205312 GACACGTGTTGGT-GCTGACTCA s panTro5.chr3 200188312 22 + 202621043 GACACGTGTTGGT-GCTGACTCA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139218 22 + 190779 GACACGTATTGGT-GCTGACTCA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35430 22 - 189199 GACACGTGTTGGT-GCTGACTCA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482756 22 - 91754291 GACACGTGTTGGT-GCGGACTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991832 22 - 74750902 GACACGTGTTGGT-GCTGACTCA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509020 22 + 17725628 GACACGTGCTGGT-GCTGACTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484546 22 - 6778120 GACACGTGTTGGT-GCTGACTCA i cebCap1.NW_016107444v1 C 0 I 152 s aotNan1.NW_018507959v1 44625 22 - 3732694 GACACGTGTTGGT-GCTGACTCA i aotNan1.NW_018507959v1 I 38 I 68 s otoGar3.GL873829 490082 15 - 608964 --------TTGGTAGCTGACTGG i otoGar3.GL873829 C 0 C 0 s canFam3.chr33 29121563 23 + 31377067 GAGGAGTACTGGGGGCTGACTCA i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=22809.000000 s hg38.chr3_KI270779v1_alt 202140 10 + 205312 TCAAAATCCC s panTro5.chr3 200188334 10 + 202621043 TCAAAATCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139240 10 + 190779 TCAAAATCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35452 10 - 189199 TCAAAATCCT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482778 10 - 91754291 TCAAAATCGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991854 10 - 74750902 CCAGAATTCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509042 10 + 17725628 CCAGAATTCC i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 490097 10 - 608964 CCAAAATTCC i otoGar3.GL873829 C 0 I 105 s canFam3.chr33 29121586 10 + 31377067 CCCAAATTCC i canFam3.chr33 C 0 I 21 e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=5880.000000 s hg38.chr3_KI270779v1_alt 202150 4 + 205312 GGGA s panTro5.chr3 200188344 4 + 202621043 GGGA i panTro5.chr3 C 0 I 36 s panPan2.chrUn_NW_014024201v1 139250 4 + 190779 GGGA i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35462 4 - 189199 GGGA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482788 4 - 91754291 AGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991864 4 - 74750902 AGGA i calJac3.chr17 C 0 I 7 s saiBol1.JH378146 509052 4 + 17725628 AGGG i saiBol1.JH378146 C 0 I 7 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=6672.000000 s hg38.chr3_KI270779v1_alt 202154 5 + 205312 CTGTG s panTro5.chr3 200188384 5 + 202621043 CTGTG i panTro5.chr3 I 36 C 0 s panPan2.chrUn_NW_014024201v1 139254 5 + 190779 CTGTG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35466 5 - 189199 CTGTA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482792 5 - 91754291 CTGTG i chlSab2.chr15 C 0 I 15 s calJac3.chr17 991875 5 - 74750902 CTGCA i calJac3.chr17 I 7 C 0 s saiBol1.JH378146 509063 5 + 17725628 CTGGA i saiBol1.JH378146 I 7 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=20206.000000 s hg38.chr3_KI270779v1_alt 202159 24 + 205312 -TGGTTTTGG-ACACTGCTGGAGTCC s panTro5.chr3 200188389 24 + 202621043 -TGGTTTTGG-GCACTGCTGGAGCCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139259 24 + 190779 -TGGTTTTGG-GCACTGCTGGAGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35471 24 - 189199 -TGGTTTTGG-ACACTGCTGGAGTCC i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 991880 26 - 74750902 GTCCTTTGGGAACGTGGCTGGAGTCC i calJac3.chr17 C 0 I 7 s saiBol1.JH378146 509068 26 + 17725628 GTCCTTTGGGAACGTGGCTGGAGTCC i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=5920.000000 s hg38.chr3_KI270779v1_alt 202183 7 + 205312 AGGTGCC s panTro5.chr3 200188413 7 + 202621043 AGGTGCC i panTro5.chr3 C 0 T 72 s panPan2.chrUn_NW_014024201v1 139283 7 + 190779 AGGTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35495 7 - 189199 AGGTGCC i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 991913 7 - 74750902 AGGTGGC i calJac3.chr17 I 7 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=19272.000000 s hg38.chr3_KI270779v1_alt 202190 29 + 205312 CTGTGTGGTTT----TGGGCACTGCTGGAGTCC s panTro5.chr3 200188348 29 + 202621043 CTGTGTGGTTT----TGGGCACTGCTGGAGTCC i panTro5.chr3 T 72 C 0 s panPan2.chrUn_NW_014024201v1 139290 29 + 190779 CTGTGTGGTTT----TGGGCACTGCTGGAGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35502 29 - 189199 CTGTGTGGTTT----TGGGCACTGCTGGAGTCC i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 991920 30 - 74750902 ---TGGAGTTCTTTGTGTACATGGCTGGAGTCC i calJac3.chr17 C 0 I 869 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=4092.000000 s hg38.chr3_KI270779v1_alt 202219 7 + 205312 AGGTGCC s panTro5.chr3 200188377 7 + 202621043 AGGTGCC i panTro5.chr3 C 0 T 36 s panPan2.chrUn_NW_014024201v1 139319 7 + 190779 AGGTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35531 7 - 189199 AGGTGCC i gorGor5.CYUI01000254v1 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=20478.000000 s hg38.chr3_KI270779v1_alt 202226 36 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188348 36 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i panTro5.chr3 T 36 T 36 s panPan2.chrUn_NW_014024201v1 139326 36 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35538 36 - 189199 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=8622.000000 s hg38.chr3_KI270779v1_alt 202262 15 + 205312 CTGTGTGGTTTTGGG s panTro5.chr3 200188348 15 + 202621043 CTGTGTGGTTTTGGG i panTro5.chr3 T 36 C 0 s panPan2.chrUn_NW_014024201v1 139362 15 + 190779 CTGTGTGGTTTTGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35574 15 - 189199 CTGTGTGGTTTTGGG i gorGor5.CYUI01000254v1 C 0 T 123 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=5867.000000 s hg38.chr3_KI270779v1_alt 202277 21 + 205312 CACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188363 21 + 202621043 CACTGCTGGAGTCCAGGTGCC i panTro5.chr3 C 0 T 36 s panPan2.chrUn_NW_014024201v1 139377 21 + 190779 CACTGCTGGAGCCCAGGTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M e gorGor5.CYUI01000254v1 35589 123 - 189199 T a score=19692.000000 s hg38.chr3_KI270779v1_alt 202298 36 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188348 36 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i panTro5.chr3 T 36 C 0 s panPan2.chrUn_NW_014024201v1 139398 36 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35466 36 - 189199 CTGTATGGTTTTGGACACTGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 T 123 T 36 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=9582.000000 s hg38.chr3_KI270779v1_alt 202334 18 + 205312 CTGTGTGGTTTTGGGCAC s panTro5.chr3 200188384 18 + 202621043 CTGTGTGGTTTTGGGCAC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 139434 18 + 190779 CTGTGTGGTTTTGGGCAC i panPan2.chrUn_NW_014024201v1 C 0 I 5109 s gorGor5.CYUI01000254v1 35466 18 - 189199 CTGTATGGTTTTGGACAC i gorGor5.CYUI01000254v1 T 36 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=4994.000000 s hg38.chr3_KI270779v1_alt 202352 18 + 205312 TGCTGGAGTCCAGGTGCC s panTro5.chr3 200188402 18 + 202621043 TGCTGGAGCCCAGGTGCC i panTro5.chr3 C 0 C 0 s gorGor5.CYUI01000254v1 35484 18 - 189199 TGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 C 0 T 36 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e panPan2.chrUn_NW_014024201v1 139452 5109 + 190779 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=19579.000000 s hg38.chr3_KI270779v1_alt 202370 36 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188420 36 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panTro5.chr3 C 0 T 108 s panPan2.chrUn_NW_014024201v1 144561 36 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panPan2.chrUn_NW_014024201v1 I 5109 T 36 s gorGor5.CYUI01000254v1 35466 36 - 189199 CTGTATGGTTTTGGACACTGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 T 36 T 36 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=19692.000000 s hg38.chr3_KI270779v1_alt 202406 36 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188348 36 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i panTro5.chr3 T 108 C 0 s panPan2.chrUn_NW_014024201v1 144561 36 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panPan2.chrUn_NW_014024201v1 T 36 T 36 s gorGor5.CYUI01000254v1 35466 36 - 189199 CTGTATGGTTTTGGACACTGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 T 36 T 36 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=19579.000000 s hg38.chr3_KI270779v1_alt 202442 36 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188384 36 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144561 36 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panPan2.chrUn_NW_014024201v1 T 36 C 0 s gorGor5.CYUI01000254v1 35466 36 - 189199 CTGTATGGTTTTGGACACTGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 T 36 T 36 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=40057.000000 s hg38.chr3_KI270779v1_alt 202478 72 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro5.chr3 200188420 72 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144597 72 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i panPan2.chrUn_NW_014024201v1 C 0 T 108 s gorGor5.CYUI01000254v1 35466 72 - 189199 CTGTATGGTTTTGGACACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i gorGor5.CYUI01000254v1 T 36 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=45914.000000 s hg38.chr3_KI270779v1_alt 202550 81 + 205312 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGT s panTro5.chr3 200188492 81 + 202621043 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144561 81 + 190779 CTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGT i panPan2.chrUn_NW_014024201v1 T 108 C 0 s gorGor5.CYUI01000254v1 35538 81 - 189199 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGT i gorGor5.CYUI01000254v1 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e saiBol1.JH378146 509094 0 + 17725628 C e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=24127.000000 s hg38.chr3_KI270779v1_alt 202631 42 + 205312 TTTGGGCAC--TGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGA-- s panTro5.chr3 200188573 42 + 202621043 TTTGGGCAC--TGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGG-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144642 42 + 190779 TTTGGGCAC--TGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGG-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35619 42 - 189199 TTTGGGCAC--TGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGA-- i gorGor5.CYUI01000254v1 C 0 T 72 s saiBol1.JH378146 509094 30 + 17725628 TTTGGGAACGTGGCTGGAGTCC----------------TTTGGGAA i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=38711.000000 s hg38.chr3_KI270779v1_alt 202673 66 + 205312 CACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCAC--TGCTGGAGTCCAGGTGCCCTGTGTGGT s panTro5.chr3 200188615 66 + 202621043 CACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCAC--TGCTGGAGTCCAGGTGCCCGGTGTGGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144684 66 + 190779 CACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCAC--TGCTGGAGTCCAGGTGCCCTGTGTGGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35589 66 - 189199 CACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCAC--TGCTGGAGTCCAGGTGCCCTGTGTGGT i gorGor5.CYUI01000254v1 T 72 C 0 s saiBol1.JH378146 509124 36 + 17725628 CGTGGCTGGAGTCC----------------TTTGGGTACGTGGCTGGAGTCC---------------- i saiBol1.JH378146 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=9330.000000 s hg38.chr3_KI270779v1_alt 202739 10 + 205312 TTTGGGCACT s panTro5.chr3 200188681 10 + 202621043 TTTGGGCACT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144750 10 + 190779 TTTGGGCACT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35655 10 - 189199 TTTGGACACT i gorGor5.CYUI01000254v1 C 0 C 0 s saiBol1.JH378146 509160 10 + 17725628 TTTGGGAACG i saiBol1.JH378146 C 0 I 2 s canFam3.chr33 29121617 10 + 31377067 TCCGGGCCCT i canFam3.chr33 I 21 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44647 68 - 3732694 I e cebCap1.NW_016107444v1 484568 152 - 6778120 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=42848.000000 s hg38.chr3_KI270779v1_alt 202749 17 + 205312 -GCTGGAGTCCAAG-----TGCC s panTro5.chr3 200188691 17 + 202621043 -GCTGGAGTCCAAG-----TGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144760 17 + 190779 -GCTGGAGTCCAAG-----TGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35665 17 - 189199 -GCTGGAGTCCAAG-----TGCC i gorGor5.CYUI01000254v1 C 0 C 0 s calJac3.chr17 992819 17 - 74750902 -GCTGCAGTTCAGG-----TGCT i calJac3.chr17 I 869 C 0 s saiBol1.JH378146 509172 17 + 17725628 -GCTGGAGTCCAGG-----TGCT i saiBol1.JH378146 I 2 C 0 s cebCap1.NW_016107444v1 484720 17 - 6778120 -GCTGGAGTCCAGG-----TGCT i cebCap1.NW_016107444v1 I 152 C 0 s aotNan1.NW_018507959v1 44715 17 - 3732694 -GCTGGAGTCCAGG-----TGCT i aotNan1.NW_018507959v1 I 68 C 0 s canFam3.chr33 29121627 23 + 31377067 GCTTGGAATCCAGGACACCTGCC i canFam3.chr33 C 0 I 1 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=90396.000000 s hg38.chr3_KI270779v1_alt 202766 32 + 205312 GCTGGGGCTGCCTCGGGGAGGAGGAAAGTTTC s panTro5.chr3 200188708 32 + 202621043 GCTGGGGCTGCCTCGGGGAGGAGGAAAGTTTC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144777 32 + 190779 GCTGGGGCTGCCTCGGGGAGGAGGAAAGTTTC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35682 32 - 189199 GCTGGGGCTGCCTCGGGGAGGAGGAAAGTTTC i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482812 30 - 91754291 GCTGGGGCTGCCTCAGGGAGGAGG--AGTTTC i chlSab2.chr15 I 15 C 0 s calJac3.chr17 992836 32 - 74750902 GCTGAGGCGGCCTCGGGAAGGAGGAACGTTTC i calJac3.chr17 C 0 I 1 s saiBol1.JH378146 509189 32 + 17725628 GCTAGGGCGGCCTTGGGAAAGAGGAATGTTCC i saiBol1.JH378146 C 0 I 1 s cebCap1.NW_016107444v1 484737 32 - 6778120 GCTGGGGTGGCCTCGGGAAGGAGGAACGTTTC i cebCap1.NW_016107444v1 C 0 I 1 s aotNan1.NW_018507959v1 44732 32 - 3732694 GCTGGGGCGGCCTCGGGAAGGAGGAACGTTTC i aotNan1.NW_018507959v1 C 0 I 16 s canFam3.chr33 29121651 32 + 31377067 GAGGGGGGGAGCCCCAGAAGGTGGAAATTGCA i canFam3.chr33 I 1 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=22406.000000 s hg38.chr3_KI270779v1_alt 202798 8 + 205312 CAGAAGAG s panTro5.chr3 200188740 8 + 202621043 CAGAAGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144809 8 + 190779 CAGAAGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35714 8 - 189199 CAGAAGAG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482842 8 - 91754291 CAGAAGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 992869 8 - 74750902 GAGAAGAG i calJac3.chr17 I 1 C 0 s saiBol1.JH378146 509222 8 + 17725628 GAGAAGAG i saiBol1.JH378146 I 1 C 0 s cebCap1.NW_016107444v1 484770 8 - 6778120 CAGAAGAG i cebCap1.NW_016107444v1 I 1 I 70 s canFam3.chr33 29121683 8 + 31377067 GAGAAGAA i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44764 16 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=7817.000000 s hg38.chr3_KI270779v1_alt 202806 33 + 205312 ---------CTTACGG------AAGAGCCTGCGGCTTGGG-AGCAGCAT s panTro5.chr3 200188748 33 + 202621043 ---------CTTACGG------AAGAGCCTGCGGCTTGGG-AGCAGCAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144817 33 + 190779 ---------CTTACGG------AAGAGCCTGCGGCTTGGG-AGCAGCAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35722 33 - 189199 ---------CTTACGG------AAGAGGCTGCGGCTTGGG-AGAAGCGT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482850 33 - 91754291 ---------CCTGAGG------AAGAGGCTGCAGTTTGGG-AGCAGCAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 992877 7 - 74750902 ---------CTCAGGG--------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509230 7 + 17725628 ---------TGCAGGG--------------------------------- i saiBol1.JH378146 C 0 C 0 s canFam3.chr33 29121691 49 + 31377067 TCTGAGGAGCCAACGGGGCTCCAGGGGCCTGCTTTGTAGACAGCAACAG i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e aotNan1.NW_018507959v1 44764 16 - 3732694 I e cebCap1.NW_016107444v1 484778 70 - 6778120 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=169799.000000 s hg38.chr3_KI270779v1_alt 202839 81 + 205312 CCCCCAGCTCGC-GTGCTGGGTGGGAAGTGCCGA-GGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTTCTCGGGACGGCT------ s panTro5.chr3 200188781 82 + 202621043 CCCCCAGCTCGC-GTGCTGGGTGGGAAGTGCCGAGGGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTTCTCGGGACGGCT------ i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144850 81 + 190779 CCCCCAGCTCGC-GTGCTGGGTGGGAAGTGCCGA-GGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTTCTCGGGACGGCT------ i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35755 69 - 189199 -CCCCAGCTCGC-GTGCTGGGTGGGAAGTGCCGA-GGGGC--TGTGCAGAGGGCTCTTGTGTTTG-----------GGGACGGCT------ i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482883 81 - 91754291 CCCCCAACTCGC-GTGCCGGGTGGGACGTGCCGA-GGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTTCTCGGGATGGCT------ i chlSab2.chr15 C 0 C 0 s calJac3.chr17 992884 80 - 74750902 CCCCCATCTTGT-GTGCTGGGTGGGGGCTGTGGA-GGAGC--TGTGCAGA-GGCTCTCGTGTTTGGCGGTTTTCTGGGGACAGCT------ i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509237 80 + 17725628 CCCCCATCTCGC-GGGCTGGGTGGTGGGTATGGA-GGAGC--TGTGCAGA-GGCTCTTGTGTTTGGGGGTTTTCTGGGGACAGCT------ i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 44780 80 - 3732694 CCCCCATCTCGC-GGGCTGGGCGGGGGGTGCGGA-GGAGC--TGTGCAGA-GGCTCTCGTGTTTGGGGGTTTTCTGGGGACAGCT------ i aotNan1.NW_018507959v1 I 16 C 0 s canFam3.chr33 29121740 89 + 31377067 CACCCACCTCACTGTGCTGGG-AGCAGGTGGGGG-GGTGCTTTGTGCAGAGGGCGCTGGGGTCTGCGGGGTTTGTAAGGCTGGGTGTCGCT i canFam3.chr33 C 0 C 0 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e cebCap1.NW_016107444v1 484778 70 - 6778120 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=115595.000000 s hg38.chr3_KI270779v1_alt 202920 47 + 205312 GTTTTCTACTTGAAATGGGGGTCCTGGAGTTCAT---GGGGAATGAGAGA s panTro5.chr3 200188863 47 + 202621043 GTTTTCTACTTGAAATGGGGGTCCTTGAGTTCAT---GGGGAATGAGAGA i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144931 47 + 190779 GTTTTCTACTTGAAATGGGGGTCCTCGAGTTCAT---Ggggaatgagagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35824 46 - 189199 GTTTTCTACTTGAAAT-GGGGTCCTCGAGTTCAT---GGGGAATGAGAGA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482964 32 - 91754291 GTTTTC---------------TCCTTGAGTTCAT---GGGGAATGAGAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 992964 47 - 74750902 GTTTTCTACTTGAAATGGGGGACCTTGAGCTCAT---GGGGAATGAAGGA i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509317 46 + 17725628 GTTTTCTACTTGAAAT-GGGGACCTTGAGTTGAT---GGGGAATGAGCGA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484848 47 - 6778120 GTTTTCTACTTGAAATGGGGGACCTTGAGTTCAT---AGGGAATGAGTGA i cebCap1.NW_016107444v1 I 70 C 0 s aotNan1.NW_018507959v1 44860 32 - 3732694 GTTTTCTA---------------CTTGAGTTCAC---GGGGAATGAGCGA i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29121829 50 + 31377067 GTTTCCCACCTGGGATGGAGGACTTGGAATTTGTGGAggggagtgagaga i canFam3.chr33 C 0 I 230 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=327790.000000 s hg38.chr3_KI270779v1_alt 202967 122 + 205312 GGTGAGCGGGAGCCAGAA--CGGGAAAGTCCTTGTCC-------GGGGGCTTCCGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGC-CCCAGAGATTCCCCTCGGGGTCAGGCCC s panTro5.chr3 200188910 123 + 202621043 GGTGAGCGGGAGCCAGAA--CGGGAAAGTCCTCGTCC-------GGGGGCTTCTGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGCGCCCAGAGATTCCcctcggggtcaggccc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 144978 123 + 190779 ggtgagcgggagccagaa--cgggaAAGTCCTCGTCA-------GGGGGCTTCTGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGCGCCCAGAGATTCCCCTCGGGGTCAGGCCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35870 123 - 189199 GGTGAGCGGGAGCCAGAA--CGGGAAAGTCCTCGTCC-------GGGGGCTCCCGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGCGCCCAGAGATTCCcctcggggtcaggccc i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 482996 130 - 91754291 GGTGAGCAGGACCCAGAA--CAGGACCATCCTCACCCCAGAGAGAGAGGCTTCTGCAGGAGCCCCCAGGGCCCTTGACCAGACACTTCCAGCTCCCCCCTGGTGCCCAGAGATTCCCTTCGGGGTCAGGCcc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993011 101 - 74750902 GGTGAGTGGGAACCAGAA---GGGCAAGTCCTCGTCTCAGGAGAGGGGGCTTCTGCAGCAGCAGCCTTGGCCCTTGGCCAGACACTTCCAGCTTCCC----------------------------CTGGCCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509363 128 + 17725628 GGTGAGTAGGAAGCAGAA---GGGCAAGTTCTTGTCCCGGGAGA-GGGGCTTCTGCAGGAGCAGCCTTGGCCCTTGGCCAGACACTTCCAGCTTCCCTCTGGCCCCCAGAGATTCCTCTCGAGATCAAGCCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 484895 129 - 6778120 GGTGAGTGGGAACCAGAA---GGGCAAGTCCTCGTCCCGGGAGAAGGGGCTTCCACAGGAGCAGCCTTGGCCCTTGGCCAGACACTTGCGGCTTCCCTCTGGCCCCCAGAGATTCCTCTCGAGATCAAGCCC i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 44892 128 - 3732694 GGTGAGTGGGAACCAGAA---GGGCAAATCCTCGTCCCGGGAGAGGGGGCTTC-GCAGGAGCAGCCTTGGCTCTTGGCCAGACACTTCCAGCTTCCCTCTGGCCCCCAGAGATTCCTCTCGAGATTAAGCCC i aotNan1.NW_018507959v1 C 0 C 0 s canFam3.chr33 29122109 124 + 31377067 ggtgggggagagCCGGAGCGCGTGAAAGTCCTCATCTGGGGAG-GAGGCTTTCTGCAGGAA-------GAGCTTAGGCCAGAGACTTCCAGCTTCGCCCTGGTGCCCGAAGATGCTTCTGGCTTTCAGGCCC i canFam3.chr33 I 230 I 16 e otoGar3.GL873829 490107 105 - 608964 I e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=31580.000000 s hg38.chr3_KI270779v1_alt 203089 27 + 205312 TGCCTACCTGCCTCGGCCTCGCGGTCG s panTro5.chr3 200189033 27 + 202621043 tgcctgccggcctcggcctcgCGGTCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145101 27 + 190779 TGCCTGCCGGCCTCAGCCTCGCGGTCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 35993 27 - 189199 tgcctgccggcctcggcctcgCGGTCG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483126 21 - 91754291 tgcctgc------cagcctcgctgtcg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993112 22 - 74750902 TGCCTTGC-----CAGCCTCGCTGTCG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509491 22 + 17725628 TGCCTTGC-----CAGGCTCGCTGTCA i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 485024 8 - 6778120 TGCCT-------------------TCG i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 45020 22 - 3732694 TGCCTTGC-----CGGCCTCGCTGCCA i aotNan1.NW_018507959v1 C 0 C 0 s otoGar3.GL873829 490212 26 - 608964 TGTCTTCCTCCC-AGGCCTTGCTACTA i otoGar3.GL873829 I 105 C 0 s canFam3.chr33 29122249 17 + 31377067 TGC----------CCACCTCCCACTCA i canFam3.chr33 I 16 C 0 e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=516108.000000 s hg38.chr3_KI270779v1_alt 203116 210 + 205312 CCTTCCTGCC--CCTCAGGAAGCCCTGCCAAGGTCCCCT------------GAAGGCCCGCAT------GCTTGC---CCGGAGG--AGGCCGCTCCTCATGTTGCCCCAGGGACTGC-CCCCAA---G---GCTTCCTTCT---T----CAGGGAAG-----------------------------AGGCGGCTC---------------------------------TTGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC--C-----------CAGGCAAACCTTCGCTTCCTCTCCTGCCC---TCCTGCC-CCGGGTTTTTCC-C s panTro5.chr3 200189060 210 + 202621043 CCTTCCTGCC--CCTCAGGAAGCCCTGCCCAGGTCCCCT------------GAAGGCCCGCAC------GCTTGC---CCGGAGG--AGGCCGCTCCTCCCGTTGCCCCAGGGACTGC-CCCCAA---G---GCTTCCTTCT---T----CAGGGAAG-----------------------------AGGCGGCTC---------------------------------TTGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC--C-----------CAGGCAAACCTTCGCTTCCTTTCCTGCCC---TCCTGCC-CCGGGTTCTTCC-C i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145128 211 + 190779 CCTTCCTGCC--CCTCAGGAAGCCCTGCCCAGGTCCCCT------------GAAGGCCCGCAC-----TGCTTGC---CCGGAGG--AGGCCGCTCCTCCCGTTGCCCCAGGGACTGC-CCCCAA---G---GCTTCCTTCT---T----CAGGGAAG-----------------------------AGGCGGCTC---------------------------------TTGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC--C-----------CAGGCAAACCTTCGCTTCCTTTCCTGCCC---TCCTGCC-CCGGGTTTTTCC-C i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36020 210 - 189199 CCTTCCTGCC--CCTCAGGAAGCCCTGCCCAGGTCCCCG------------GAAGGCCCGCAT------GCTTGC---CCGGAGG--AGGCCCCTCCTCATGTTGCTCCAGGGACTGC-CCCCAA---G---GCTTCCTTCT---T----CAGGGAAG-----------------------------AGGCTGCTC---------------------------------TTGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC--C-----------CAGGCAAACCTTCGCTTCCTTTCCTGCCC---TCCTGCC-CTGGGTTTTTCC-C i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483147 210 - 91754291 ccttcctgcc--CCTCAGGAAGCCCTGCCCAGGTCCCCT------------GGAGGCCTGCAC------ACTC-C---CCAGAGC--AGGCCCCTCCTCACACTGCCCCAGGGACTCCTCCCCAA---G---GCTTCCTTCT---T----CAGGGAAG-----------------------------AGGTGGCTC---------------------------------TTGGTCAG------------------------------------------GGAGCTGT---------TGGGGCTGTTTCCGAC--C-----------CAGGCGAACCTTCGCTTCCTTTCCTGCCC---TCCTGCC-CCGGGTTTTTCC-G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993134 195 - 74750902 CCTACCTGCC--CCTCAGGAAGCCCTG--GAGGCACCT-------------------------------GCTTGC---CCGGAGG--AGGCCCTTCCTCACATTGCTCCAGGGATTCCTCCCCGA---G---GTTTCCTTCT---T----CGGGGAAG-----------------------------AGGAGACTC---------------------------------TTGCTGGG------------------------------------------GGAGTTGT---------CAGGGCTGTTTCTAAG--C-----------CAGGCAAACCTTGACTTCCTTACCCGCCT---TCCTGCC-CTGGGTTTCTCT-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509513 194 + 17725628 CCTTCCTGCC--CCTCAGGAAGCCCTG--GAGGCACCT-------------------------------GCTTGC---CCAGAGG--AGGCCCCTCCTCACATTGCTCCAGGGATTCCTCCTCAA---G---GTTTCCTTCT---T----CCGAGAAG-----------------------------AGGAGACTC---------------------------------TTGCTCGG------------------------------------------GGAGTTGT---------CGGGGCTGTTTCTAAG--C-----------CGGGCAAACCTTGACTTCCTTACCTGCCT---TCCTGCC-CTGGGTTT-TCC-- i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 485032 195 - 6778120 CCTTCCTGCC--CCTCAGGAAGCCCTG--GAGGCACCT-------------------------------GCTTTC---CTGGAGG--AGGCCCCTCCTCACATCGCTCCAGGGATTCCTCCCCAA---G---GTTTCCTTCT---T----CAGGGAAG-----------------------------AGGAGACTC---------------------------------TTGCTCGG------------------------------------------GGAGTTGT---------CGGGGCTGTTTCTCAG--C-----------CAGGCAAACCTTGACTTCCTTACCTGCCT---TCCTGCC-CTGGGTTTTCCC-- i cebCap1.NW_016107444v1 C 0 C 0 s aotNan1.NW_018507959v1 45042 195 - 3732694 CCTTCCTGCC--CCTCAGGAAGCCCTG--GAGGCCCCT-------------------------------A-TTGC---CCGGAGG--AGGCCCCTCCTGACATGGCTCCAGGGATTCCTCCCCAA---G---GTTTCCTTCT---T----CAGGGAAG-----------------------------AGGAGACTC---------------------------------TTGCTCGG------------------------------------------GGAGTTGT---------CGGGGCTGTTTCTAAG--C-----------CAGGCAGACCTTGACTTCCTTACCTGCCT---TCCTGCC-CTGGGTTTTTCCC- i aotNan1.NW_018507959v1 C 0 I 30 s otoGar3.GL873829 490238 247 - 608964 CCTT-TTGCCCGCCTCAGAAAGTTCTGGCCAGGTCCCCT------------AAAGGCCCATACCTG--TACCTGCTGGCTGGAGGGTAGGCTCTTCCTCATGTTGCCCCAGGGCTTCCTTCCCCATCCA---GCTTCCTTCTCTAT----CCAGGAGA-----------------------------AGGAGATTT--AGTCAT----TTCTTTGGT---------TTATTTATCAG------------------------------------------AAAGTAGT---------TGGGACTCTCTCTAGC--C----------TCAGGCAAATCTTAGCTTCCTTATCTGCTC---TTCTACAGCTGAGTTTTTCC-C i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65483101 306 - 98207768 CCTTCTCACCCACCTCAGGAAGCTTGGGCCAGGTCCCCTTTACCACTacacacaaacacacac------acacac---acacac---acacacacacTCATGATGCCCCAGGGATTCC-CTCTGG---G---TCTTCCTTCT---CCTTACAGGGAAG-----------------------------AGAAAGTTTGCAATGATGGCCTTTTGTGGT-CATCACTCTCCTTGGCTGGTCTCCAAAGAGCCTCTGGGTTTGACTGAAGTTTAAGCAATACAGAGTAGT---------TGTGGCACTATGAGAC--CAGCCTGGTCTCCAGTCAGCCCTTAACTTCCTTACCTA------TTCCACC-CTAGTCTTTA---- i mm10.chr16 I 464 C 0 s canFam3.chr33 29122266 258 + 31377067 CCACCCAGCT--CCC---AAAGCTCTGACAAGGCCCCCA------------GAAAACCTCCAGGTACCTGCTGCT---GGGGAGG--AGGACAGCCCTCCCGCCGTCCCAGGGGATCCTGCCTCA---GCCTGCTTCCCCCC---A----CAGCCAGGGCTCCATCTCCGCTCCCCCAGGTGCTCACAGGTGCCTC------------CGGTGCGCTGCA---------CTGTGCAG------------------------------------------AGGCTTGTTCATCAGGCTGCAGCTTTTTCTATCTTC-----------CAGGCA--CCTTAGCTTCCTTACCTGCTCAGGTACTGCC-T------------- i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120951918 1779 + 123690457 M a score=-3298.000000 s hg38.chr3_KI270779v1_alt 203326 20 + 205312 CAGACAGACCTACGGGTGCC s panTro5.chr3 200189270 11 + 202621043 CAGAca---------gtgcc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145339 11 + 190779 CAGAca---------gtgcc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36230 10 - 189199 CAGACA---------GACC- i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483357 10 - 91754291 GAGACA---------GACC- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993329 20 - 74750902 CGCACAGACCCATGGGTGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509707 20 + 17725628 TGCACAGACCTATGGGAGCC i saiBol1.JH378146 C 0 C 0 s cebCap1.NW_016107444v1 485227 20 - 6778120 CGCACAGACCTACAGGTGCC i cebCap1.NW_016107444v1 C 0 N 0 s otoGar3.GL873829 490485 10 - 608964 GAGACA---------GACC- i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65483407 19 - 98207768 CAGAGAACCCCAGAGGTGC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29122524 16 + 31377067 ---GCAGCCCCCCAGGTGC- i canFam3.chr33 C 0 C 0 e aotNan1.NW_018507959v1 45237 30 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=-9549.000000 s hg38.chr3_KI270779v1_alt 203346 21 + 205312 AGTGCCAGTACGGGTGCCAGT s panTro5.chr3 200189281 21 + 202621043 agtgccagtacgggtgccagt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145350 21 + 190779 agtgccagtacgggtgccagt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36240 13 - 189199 --------TACGGGTGCCAGT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483367 13 - 91754291 --------TGCAGGTGCCAAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993349 5 - 74750902 --------TGGGG-------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509727 5 + 17725628 --------TGGGG-------- i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 490495 6 - 608964 ---------CGGGGT------ i otoGar3.GL873829 C 0 C 0 s mm10.chr16 65483426 6 - 98207768 ----------CGGGTG----- i mm10.chr16 C 0 C 0 s canFam3.chr33 29122540 5 + 31377067 ----------------CCAGA i canFam3.chr33 C 0 C 0 e aotNan1.NW_018507959v1 45237 30 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=164393.000000 s hg38.chr3_KI270779v1_alt 203367 67 + 205312 GCCCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGCCAGGCCGAACACCATCGTTTCACAGTCC--AC s panTro5.chr3 200189302 67 + 202621043 gccCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGCCAGGCTGCACACCATCGTCTCACTGTCC--AC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145371 67 + 190779 gccCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGCCAGGCCGAACACCATCGTCTCACTGTCC--AC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36253 67 - 189199 GCCCCAGCCTCGCCTCCCCTGCAGCTCTCTCCTGGGCCAGGCTGAACACCGTCGTTTCACAGTCC--AC i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483380 67 - 91754291 GCCCCAGCCTCACCTCCCCCGCAGCTCCCTCCTGGGCCAGGCTGAACGCCGTCGCTCCACAGTCC--AC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993354 62 - 74750902 --CCCAGCCTCTTCTCCCCCGCAGCTCCCTCCTGGGTCAGCCTGAACACCATCGCTTCA-CGTCC---- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509732 63 + 17725628 --CCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGTCAGCCTGAACACCATCGCTTCACCGTCC---- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 45267 67 - 3732694 GCCCCCGCCTCGTCTCCCCCGCCGCTCCCTCCTGGGTCAGCCTGAGCGCCATCGCTTCGCAGTCCAC-- i aotNan1.NW_018507959v1 I 30 I 894 s otoGar3.GL873829 490501 67 - 608964 GCCCCAGTCTTGTCTCCCCTACCACTCCCTCCAGGACCAGCCTAAGCACCATCACCTCATTGTCC--AC i otoGar3.GL873829 C 0 I 1 s mm10.chr16 65483432 43 - 98207768 --TCCAGGCTTGCC-CACTTGCAGCT-------GGAT--------------TTACTTCACTGTCT--GA i mm10.chr16 C 0 C 0 s canFam3.chr33 29122545 63 + 31377067 -GCTCCCCTTCGCCTTCCT--CTTCCCCCTCCCAGACTGTCCTGAGCACCG-CGCTTCCCGGGCC--AT i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120951918 1779 + 123690457 M a score=540442.000000 s hg38.chr3_KI270779v1_alt 203434 387 + 205312 TTACTGAGCTGAGA----AGA-----CCTCCTCGtatgaagatctgggaa-ggcctgag-ctttcaccggcctgcaagctcacgggc-gagcctgccatggttgaa-ggacgctggcagaagaccagagaccctggcccaggg-cagaggactctgtcactcacggcacggcacgttgctcagtgtgaacg------------------agcttcctcttca----ctcccgtttcctttgctccccaaaccccacgggggctacgcagaggc----ccaggtggattctgtgg--cacagctgggtttgcctcaccgccggggatccccgtgcttaggaaacgccggactgtcatgaggggctgcgaagcaaacctgcccaacctttccc------gggggtggacgtcgtctttgttacactggacagcgagc s panTro5.chr3 200189369 382 + 202621043 TTCCTGAGCTGAGA----ACA-----CCTCCTCGtatgaaggtctgggaa-ggcctgag-ctgtcaccggcctgcaagctcacgggc-gagcctgccatggttgaa-ggacgctggcagaagaccagagaccctggcccaggg-caaaggactctgtcactcacggcacggcacgttgctcagtgtgaacg------------------agcttcctcttca----ctcccgtttcctttgctccccaaaccccacgggggctacgcagaggc----ccaggtggattctgtgg--cacag-tgggtttgcctcaccgccgaggatccccgtgcttaggaagcgccggtctctcatga---gctgcgaagccaacctgcccagcctttccc-------ggggtggacgttatcttggttacactggacagcgagc i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145438 385 + 190779 TTCCTGAGCTGAGA----ACA-----CCTCCTCGtatgaaggtctgggaa-ggcctgag-ctgtcaccggcctgcaagctcacgggc-gagcctgccatggttgaa-ggacgctggcagaagaccagagaccctggcccaggg-caaaggactctgtcactcacggcgcggcacgttgctcagtgtgaacg------------------agcttcctcttca----ctcccgtttcctttgctccccaaaccccacgggggctacgcagaggc----ccaggtggattctgtgg--cacag-tgggtttgcctcaccgccgaggatccccgtgcttaggaagcgccggtctctcatgagggtctgcgaagccaacctgcccagcctttccc-------ggggtggacgttatcttggttacactggacagcgagc i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36320 378 - 189199 TTACTGAGCTGAGA----AGA-----CGTCCTCGtgtgaagatctgggaa-ggcctgag-ctttcaccggcctgcaagctcacagg-------tgccatggttgaa-ggacgctggcagaagaccagagaccctggcccaggg-caaaggactctgtcactcatggcacggcatgttgctcagtgtgaacg------------------agcttcctcttca----ctcccgtttcctttgctccccaaaccccacaggggctacgcagaggc----ccaagtggattctgtgg--cacag-tggatttgcctcaccg-cgaggatccccgtgcttaggaaacgccagtctctcatgaggggctgcgaagcaaacctgcccaacctttccc-------agggtggacgttatctttgttacactggacagcgagc i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483447 363 - 91754291 TCACTGAGCTGAAA----AGA-----CCTCCTCGTGTGAAGATCT-----------------------GGcctgcaagctcacaggc-gagcctgccgtggttgaa-ggccgctggcagcagaccggagaccctcgtccagag-caaaggactctgtcactcacggcacggcacgttgctcagtgggaaca------------------aacttcctcttca----ctcccgtttcctttgctccccgaactccacaggggctatgcagaggc----ccaagtggattctgcgg--c-cgg-tgggtttgcctcacctccgagggtccctgtgcttaggaag-gccagtctctcgtgaggggttgtgaagcaaacctgcccaacctttccc------gggggcagacgttttctttactatactgaacagcaagc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993416 335 - 74750902 --------------------A-----CCTCCTGTtatcaagatctgggaa-ggcctgag-ctttcccccacctgcaggctgtcaagc-gagcctgccacggttgagtggacactggcagaagacaagagaccccgggtcagag-ccgagggctccaggactcacagcacg---cgctgttcggtgcgaatg------------------aacttcctcttca----catcagtgcccttcgctcctcaaaccccac-ggggccacgcagaggcag--ctacgtggactgaatga--cgtgg-tgggtttgcctcgccga---------------------------ggtctctcagcgggg-------------cctgcccagcctttctttctcccggtggtacatgctgtcttcattccatagaacagcaagc i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 509795 349 + 17725628 --------------------A-----CCTCCTGTtatcaagatctgggaa-ggcccgag-cttt-ccccgcctgctagctctcaagc-gaacctgccacggttgcgtggacgctggcagaagacaagataccccgggccaggg-ccgagggctccagcactcacggcaca---tgc-gttcagttcgaatg------------------aacttcctcttca----cctcagtgcccttcgctcctcaaaccccac-ggggccgcgcagaggcag--ctacgtggcttgagtga--tgtgg-ggggcttgcctcaccgccgagg---------------------tggtctctcagcaggggctgcgaggcaaacctgcccaacctttctttctcctggtggga---gacgtcttcattccacagaacggcaagc i saiBol1.JH378146 C 0 C 0 s otoGar3.GL873829 490569 389 - 608964 TAACTGAGCTCAAA----AGACAGACCCCACTGGtgttaagaattgggaagggcctgagatttttacctacctgtaagctaataagt-gaatctgcctcagtttgataga--ctggcagaagatatgagatccgaggtcagagacaaaggaatgcattactcaaggaacagcaaatagc---------atg------------------agcttcatcttca----cttt-gtttcctttggtctcctaaccccacaggtgcaacccaggggcaggcccaagtggattctatga--catag-tgggtttgcatcatagctgaggaaccctgagcttaggaaaagccaatctcttacaaggggctgcaaagcaaacttgcccagccttcccc----ctaccagtagacattgtttttatcATATTAGATAGCCggc i otoGar3.GL873829 I 1 N 0 s mm10.chr16 65483475 396 - 98207768 CAACTGGCCTGAAAACACAGA-----CCGATGGAtgccaacaaccatgaagggtctgat-attatatccactagtgaactaacaagc-tggcctgccacagttttacagatgttagcaaa----caaaaaaccataacaagaa-caaag-------ccactcacagcagaccctg--ggttagaggcaaagcgatttgttacagccgctaacatcagcttcagggttcattggttcctctgctacttg-----ccctgagacaatacagaggcaggcccagatgtgttctatgagccaaag-tgagcttacatcccagc------tacccaggct--aggaacaccaatatcttatctacagctataaaacaaacctgtccaaccttttcc----ccagagctaaacgatatctctgtgctgttggacagtaaac i mm10.chr16 C 0 C 0 s canFam3.chr33 29122608 296 + 31377067 TTACTGAGCTGAAA----ACA-----CATACC-------------------TGCCCGTG--------------------TCACAGACAGGGCCTGCCACAGTGTCACGGGTGCTGGCGGGAGACCTGAGG---------AGAG-CTGAA----------------------------CCTCAGGTCGGGTA-----------------------------------GTCGGGTGTC---GGCCGCCTTGAGcccccagaggccacacggaggcgc--cggcctgggctctgc-a--cacac-cgtgcttgtccca--actgagaaaccctaagcttaggacagtcggatctttt-taagaggctgccagg-aaacctgcccagcgtttcct-----tggaggtaaacatcctctttatgatacgggacagccagc i canFam3.chr33 C 0 C 0 e aotNan1.NW_018507959v1 45334 894 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=376365.000000 s hg38.chr3_KI270779v1_alt 203821 196 + 205312 aaatctcgcttctgccccagagggagacgctgtccctgcgcgccgagactttcactatatacacgtccttgac--gagagtccagagcaaaaggcc-----gtcggcgcatctgctcctgagacttgcagaaacgtggggaaccagt--gaaaaattgtc-tccGACATCCGAGACCCAGAG-----GAAGCCCAGGC-CAACGGGCGCAGG s panTro5.chr3 200189751 196 + 202621043 aaatctcgcttctgccccagagggagacactgtccccgcgcgccgagactttcactatatacacgtccttgat--gagagtccagaacaaaaggcc-----gtcggcacatctgctcctgagacttgcagaaacgtgggaaaccagt--gaaaaattgtc-cccgacaTCCGAGACCCAGAG-----GAAACCCAGGC-CAACGGGCGCAGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 145823 196 + 190779 aaatctcgcttctgccccagagggagacactgtccccgcgtgccgagactttcactatatacacgtccttgac--gagagtccagaacaaaaggcc-----gtcggcacatctgctcctgagacttgcagaaacgtgggaaaccagt--gaaaaattgtc-cccgacaTCCGAGACCCAGAG-----GAAACCCAGGC-CAACGGGCGCAGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36698 196 - 189199 aaatctcgcttctgccccagagggagacactgtccctgcgcgccaagactttcactatatacacgtccttgat--gagagtccagaacaaaaggcc-----gtcagcaaatctgctcctgagacttgcagaaatgtgggaaaccagt--gaaaaattgtc-tccGACATCCGAGACCCAGAG-----GAAACCCAGGC-CAACGGGCGCAGG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 483810 199 - 91754291 aaatctcccttctgtcccagagggagacatggtccccgtccgccaagactttcactatataaacgtccttgacaagagagtccagaacaaaaggcc-----gtcagcgcatgtgctcctgagacttgcagaaatgtgggaaaccggt--gaaaaattgcctcccgacaTCCGGGACCCAGAG-----GAAACCCAGGC-CGATGGGCACAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993751 196 - 74750902 agatctc-cttctgccccagagggggacactgacgccgtccgccaagcctttcactagataaacatccttgaccagagagtccagatcaaaaggcc-----ggcagcgcatctgctcctgagacttgcagaaatgagggaaaccaat--gaaaacttgtctcccaacaTCC--GAGCCACAG-----CACACCCAGCC-CAGCGGGCGCAGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510144 198 + 17725628 agatctc-cttctgccccagagggagacgctgtcgccatccgccaagcctttcgctggataaacgcccttgaccagagagtccagagcaaaaggcc-----gtcagtacagctgctcccgagatttgcagaaatgtggggaaccaat--gaagacttgtctcccgacaGCTGAGAGCCACAG-----CGAGCCCAGCC-CACCAGGCGCAGG i saiBol1.JH378146 C 0 I 29 s mm10.chr16 65483871 201 - 98207768 agatcagcctcctg-cacaaagggagacactg-ccttgtcttccaatgctctcgctgtatgaacattctgg----aagatcccaaaacaaaaggacaaaatgtcaatgcatttgttcttaaaatttgcagaaatgtgattgagttgtagaaaaaaatgtctcccaacaTCCAGGAGCCAGGG-----AAGACCAAGGCTCCATTAGCATGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29122904 184 + 31377067 aaatctg-cttctgtctc------------tgtccct-----caaagctgtcccccacccaaacacccttgaaaagatagtctagagcaaaaggcc-----aacggtatttctgctcctgagacttgtaaaaacatgag--actggt--ggaggactgtctcccaacaTCTGAGATccggcggggccgaggcccgggt-ccgcgggcggggg i canFam3.chr33 C 0 C 0 e aotNan1.NW_018507959v1 45334 894 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=16780.000000 s hg38.chr3_KI270779v1_alt 204017 22 + 205312 --------------GTGCTGGC-TTTTCCGC--TGCCTT s panTro5.chr3 200189947 23 + 202621043 --------------GTGCTGGCTTTTTCCGC--TGCCTT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146019 23 + 190779 --------------GTGCTGGCTTTTTCCGC--TGCCTT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36894 23 - 189199 --------------GTGCTGGCTCTTTCCGC--TGCCTT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 484009 23 - 91754291 --------------TTGCTGGATTTTTCCGC--TGCCGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993947 16 - 74750902 --------------CTGCTGGC-TTTTCCTC-------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65484072 22 - 98207768 --------------CTGTTGGCTCTTTCC-C--TGTCTC i mm10.chr16 C 0 I 1 s canFam3.chr33 29123088 39 + 31377067 TCGTCACCTGCACCCCGTCAGCTCCGCCCCCCACGCCGT i canFam3.chr33 C 0 C 0 e aotNan1.NW_018507959v1 45334 894 - 3732694 I e saiBol1.JH378146 510342 29 + 17725628 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=51115.000000 s hg38.chr3_KI270779v1_alt 204039 46 + 205312 ---------AGGTTTCAC----------CGCGGGTGCCGTCTAGCCCCGTCCCCCACGTCTCCGT s panTro5.chr3 200189970 46 + 202621043 ---------AGGTTTCAC----------CGCGGGTGCCGTCTACCCCCGTTCCCCACGTCTCCGT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146042 46 + 190779 ---------AGGTTTCAC----------CGCGGGTGCCGTCTACCCCCGTTCCCCACGTCTCCGT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36917 46 - 189199 ---------AGGTTTCAC----------CTCGGGTGCCATCTACCCCCGTTCCCCACGTCTCCGT i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 484032 46 - 91754291 ---------CGGTTTCAC----------CTCAGGTACCATCTACCTCCGTCCCGCAGGTCTCCGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993963 40 - 74750902 -------------TTTAC----------CCCAGGTG-TAGCCA-CCCCGTGGCCCAGGCCTCCAT i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510371 45 + 17725628 ---------AGGTTTTGT----------CCTGGGTG-TATCCACCCCCATGGCCCAGGCCTTCAT i saiBol1.JH378146 I 29 C 0 s mm10.chr16 65484095 56 - 98207768 ---------GGCTTTCGTGAGTGGCTCACACAGGTATCACAGAACCCCTTTCCTCAAGCCACCAT i mm10.chr16 I 1 I 2568 s canFam3.chr33 29123127 52 + 31377067 AGGTGGGCCCGGTGACTC----------CCTCAGCACCACA---CCCCCCTTCCCGGGtctccgc i canFam3.chr33 C 0 C 0 e aotNan1.NW_018507959v1 45334 894 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=36853.000000 s hg38.chr3_KI270779v1_alt 204085 17 + 205312 GGCCAGCACAGGGCCCG s panTro5.chr3 200190016 17 + 202621043 GGCCAGCACAGGGCCCG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146088 17 + 190779 GGCCAGCACAGGGCCCG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36963 17 - 189199 GGCCAGCACAGGGCCCA i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 484078 17 - 91754291 GGCCAGCACACGGCCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994003 17 - 74750902 GGCCAGCACAGTGCCTG i calJac3.chr17 C 0 I 128 s saiBol1.JH378146 510416 17 + 17725628 GGCCAGCACAGTGCCTG i saiBol1.JH378146 C 0 I 128 s canFam3.chr33 29123179 16 + 31377067 -accagcgcagtgcccg i canFam3.chr33 C 0 N 0 e mm10.chr16 65484151 2568 - 98207768 I e aotNan1.NW_018507959v1 45334 894 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=97944.000000 s hg38.chr3_KI270779v1_alt 204102 63 + 205312 AAatgagaccgctcataaataactgaaaaaatcacacttacctcagattgtaccctactatgt s panTro5.chr3 200190033 63 + 202621043 AAatgaaaccactcataaataattgaaaatttcacacttacctcaaattgtaccctactatgt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146105 63 + 190779 AAatgaaaccactcataaataattgaaaatttcacacttacctcaaattgtaccctactatgt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 36980 63 - 189199 AAatgaaaccgctcataaataattgaaaaattcacacttacctcaaattgtaccctactatgt i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 484095 63 - 91754291 AAatgaaactgctcataaataattgaaaaattcacacttacctcaaattgtaccctgctatgt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994148 63 - 74750902 aaatgaaactgctcataaataattgcaaaattcacactttgctcaaattgtaccccactctgt i calJac3.chr17 I 128 C 0 s saiBol1.JH378146 510561 63 + 17725628 aaatgaaattgctcataaatcattgcaaaatttacgctttgctccaattgttccctattctgc i saiBol1.JH378146 I 128 C 0 e mm10.chr16 65484151 2568 - 98207768 I e aotNan1.NW_018507959v1 45334 894 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=117847.000000 s hg38.chr3_KI270779v1_alt 204165 105 + 205312 caatcatgttggaacaaattagcgtttctgaaacaagagttatggcagaagtgactgCGATGTTCCGATGTTTCTAGGTGTTGGCACGGA-TACTGTT--CGGTCCCA--- s panTro5.chr3 200190096 105 + 202621043 caatcatgttggaacaaattagcgtttctgaaacaagagttacagcagaagtgactgCGATGTTCCGATGTTTCTAGGTGTTGGCACGGA-TACTGTT--CGGTCGCA--- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146168 105 + 190779 caatcatgttggaacaaattagcgtttctgaaacaagagttacagcagaagtgactgCGATGTTCCGATGTTTCTAGGTGTTGGCACGGA-TACTGTT--CGGTCGCA--- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37043 105 - 189199 caatcatgttggaacaaattagcgtttctgaaacaagagttacagcagaagtgactgCGATGTTCCGATGTTTCTAGGTGTTGGCACGGA-TACTGTT--CGGTCGCA--- i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 484158 62 - 91754291 cagtcatgttgcaacaaattagcgtttctgaaacaagagctagagcagaagtgac-----------------tCTAGCT-------------------------------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994211 107 - 74750902 caatcacactggaacaaatgagtgtttctgaaacaagagtcatagcagaagtgcctTCAGTGTTCTGGGGTGTAGCAGTGTTGCCACGTG-TACTGTTCACAGTAATC--- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510624 105 + 17725628 caattgcattgggacaaactagtgtttctgaaacaagagtcatagcagaa--GCCTGCAGTGTTCTGATGTGGAGCAATATTGGAACGTG-TACTGTTCACGGTCATC--- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65486719 96 - 98207768 cgatcttgctggaacaa------gtttgtgaactgagagctatagctgcactgac-----tgGTCTAATGTTCAAAAGGATTGACTCAGACTGCTG----CCATCACACTA i mm10.chr16 I 2568 C 0 e aotNan1.NW_018507959v1 45334 894 - 3732694 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=21255.000000 s hg38.chr3_KI270779v1_alt 204270 10 + 205312 ACCCCAGGAG s panTro5.chr3 200190201 10 + 202621043 ACCCCAGGAG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146273 10 + 190779 ACCCCAGGAG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37148 10 - 189199 ACCCCAGGAG i gorGor5.CYUI01000254v1 C 0 C 0 s chlSab2.chr15 484220 9 - 91754291 -CACCGGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994318 9 - 74750902 ATCCCCGG-G i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510729 10 + 17725628 ACCCCAGGAG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 46228 10 - 3732694 ACCCCAGGAG i aotNan1.NW_018507959v1 I 894 C 0 s mm10.chr16 65486815 10 - 98207768 ACCCTGTGAG i mm10.chr16 C 0 C 0 e nomLeu3.chr11 120951918 1779 + 123690457 M a score=196638.000000 s hg38.chr3_KI270779v1_alt 204280 75 + 205312 GTAGTTACTGGGAGCCATTCTGAGGAGGGAGTGCTGAGGACTCCCCTCAACAAGGGGCTGTGGCCAAGGAAAGGG s panTro5.chr3 200190211 74 + 202621043 GTAGTTACTGGGAGCCATTCTGAGGAGGGAGTGCTGAGGAC-CCCCTCAATAAGGGGCTGTGGCCAAGGAAAGGG i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146283 74 + 190779 GTAGTTACTGGGAGCCATTCTGAAGAGGGAGTGCTGAGGAC-CCCCTCAATAAGGGGCTGTGGCCAAGGAAAGGG i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37158 75 - 189199 GTAGTTACTGGGAGCCATTCTGAGGAGGGAGTGCTGAGGACCCCCCTCAATAAGGGGCTGTGGCCAAGGAAAGGG i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120953697 75 + 123690457 GTAGTTACTGGCAGCCATTCTGAGAAGGGAGTGCTGAGGACCCCCGTCAATAAGGGGCTGTGACCAAGGAAAGGG i nomLeu3.chr11 M 1779 C 0 s chlSab2.chr15 484229 74 - 91754291 GTAGTTCCTGGGAGCCCTTCTGAGGAGGGAGTGCTGAGGACCCCCCTCCATAAGGGGCTGTGGCCAAGGAAA-GA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994327 74 - 74750902 GGAGTTACTGGCAGCCATTCCCAGGAGGGA-TGCTGAGGACCCGCCCCAGTGAGGGGCTGTGGCCGAGGAAAGGG i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510739 73 + 17725628 GGAGTTACTGGGAGCCATTCTCCGGAGGGA-TGCTGAGGACCCA-CCCGGTGAGGGGCTGTGGCCGAAGAAAGGG i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 46238 74 - 3732694 GGAGTTACTGGGAGCCATTCTCAGGAGGGA-TGCTGAGGACCCACCCCGGTGAAGGGCTGTGGCCGAGGAAAGGG i aotNan1.NW_018507959v1 C 0 I 9 s mm10.chr16 65486825 57 - 98207768 GAAGTTTCTGTGAG--ATTCTAAAGAGCAAGGGGTGGGGACCCACCTATGTGAGG-----------AGGA----- i mm10.chr16 C 0 C 0 a score=36457.000000 s hg38.chr3_KI270779v1_alt 204355 44 + 205312 GCCCTGAGAGACCTCACACAGAGCCCCCC------AGTCGCATACGGCAC-- s panTro5.chr3 200190285 44 + 202621043 GCCCTGAGAGACCTCACACAGAGCCCACC------GGTCGCATACGGCGC-- i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146357 44 + 190779 GCCCTGAGAGACCTCACACAGAGCCCACC------GGTCGCATACGGCGC-- i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37233 44 - 189199 GCCCTGAGAGACCTCACACAGAGCCCACC------GGTTGCATACGGCAC-- i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120953772 44 + 123690457 GCCCTGTGAGACCTCATACAGAGTCCACC------GTTCGCATACGGCGC-- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484303 44 - 91754291 ACCCCGAGAGGCCTCACACAGAGTCCACC------GTTCGCACTCGGCGC-- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994401 17 - 74750902 ACTCTGAGAGACGGCGT----------------------------------- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510812 17 + 17725628 ACTCTGAGAGACTGCGT----------------------------------- i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65486882 42 - 98207768 --ACTGTGAGA--------AGAACCAACCGTGCAAGTTCATAAACTCTGCAT i mm10.chr16 C 0 C 0 e aotNan1.NW_018507959v1 46312 9 - 3732694 I a score=208140.000000 s hg38.chr3_KI270779v1_alt 204399 77 + 205312 GGCTGAACTCTCCTGGCTTCCCAGAGAATCCAGAAGGAA--------AGGGCGGCCTCC------------------------------CGCAGCCCCCGCCAGCCAGCTCAGG-G s panTro5.chr3 200190329 77 + 202621043 GGCTGAACTCTCCTGACTTCCCAGAGAATCCAGAAGGAA--------AGGGCGGCCTCC------------------------------CGCAGCCCCGGCCAGCCAGCTCAGG-G i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146401 77 + 190779 GGCTGAACTCTCCTGACTTCCCAGAGAATCCAGAAGGAA--------AGGGCGGCCTCC------------------------------CGCAGCCCCCGCCAGCCAGCTCAGG-G i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37277 77 - 189199 GGCTGAACTCTCCTGGCTTCCCAGAGAATCCAGAAGGAA--------AGGGCGGCCTCC------------------------------CGCGGCCCCCGCCAGCCAGCTCAGG-G i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120953816 76 + 123690457 GGCTGAACTCTCCTGGCTTCCCAGAGATTCCAGAAGGAA--------AGGAT-GCCTCC------------------------------CACAGCCCCCACCAGCCAGCTCAGG-G i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484347 77 - 91754291 AGCTGAACTCTCCAGGCTTCCCAGAGAATCCAGAAGGAA--------AGGGCCACCTCC------------------------------CACAGCCCCAGCCAGCCAGCTCAGG-G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994418 76 - 74750902 GGCTGAGCTCTCCAGGCTTCCCAGAGGATCCAGAAGGAA--------AGCGCTGCCTCC------------------------------CATGGCCCCCGCCAGCCTGCTCAGG-- i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510829 75 + 17725628 GGCTGAGCTCTCCAGGCTTCCCAGAGGATCCAGAAGGAA--------AGTGCTGCCTCC------------------------------CATGA-CCCCGCCAGCCTGCTCAAG-- i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 46321 77 - 3732694 GGCTGAGCTCTCCAGGCTTCCCAGAGAATCCAGAAGGAA--------AGTGCTGCCTCC------------------------------CATGACCCTCGCCAGCCTGCTCAGGG- i aotNan1.NW_018507959v1 I 9 I 24 s mm10.chr16 65486924 114 - 98207768 GGCCTAACTTTCAAGGCCTCCCAGAGAATCCGTAAGTAACTAATACTAAGGTGTCCGCCAACCCAAcccaccccgcaccccatccccatccccacccccaccc-ccaccccATA-G i mm10.chr16 C 0 C 0 a score=88515.000000 s hg38.chr3_KI270779v1_alt 204476 45 + 205312 GCAGACGGCCTAGTGGGGCCCTTGCCCAGCCACCCGCCTATCTAT s panTro5.chr3 200190406 45 + 202621043 GCAGACGGCCTAGTGAGGCCCTTGCCCAGCCACCCGCCTATCTAT i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146478 45 + 190779 GCAGACGGCCTAGTGAGGCCCTTGCCCAGCCACCCGCCTATCTAT i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37354 45 - 189199 GCAGACGGCCTAGTGGGGCCCTTGCCCAGCCACCCGCCTATCTAT i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120953892 45 + 123690457 GCAGACGGCCTAGTGGGGCCCTTGCCCAGCCACCCACCTGTCTAT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484424 45 - 91754291 GCAGACGGCCTAGTGGGGCCCCTGCCCAGCCACCCACCTAACCAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994494 45 - 74750902 GCACGCTGCCTCATGGGCCCCTTGCCCAGCCGCCCACCTGCCGGC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510904 44 + 17725628 GCACACTGCCTCG-GGGCCCCTTGCCCAGCCGCCCACCTGTTGGC i saiBol1.JH378146 C 0 C 0 s mm10.chr16 65487038 37 - 98207768 CCAGCCTGCCTATCAATATACTTGTCCATCAATCAGC-------- i mm10.chr16 C 0 C 0 e aotNan1.NW_018507959v1 46398 24 - 3732694 I a score=272543.000000 s hg38.chr3_KI270779v1_alt 204521 104 + 205312 TGGCTAAAAAA--ATGTAAAAACAAAAATCACTCTTCCCATACTACTCTTTTTCTCCTTCCCTCTTT-TTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC s panTro5.chr3 200190451 104 + 202621043 TGGCTAAAAAA--ATGTAAAAACAAAAATCACTCTTCCCATACTACTCTTTTTCTCCTTCCCTCTTT-TTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146523 104 + 190779 TGGCTAAAAAA--ATGTAAAAACAAAAATCACTCTTCCCATACTACTCTTTTTCTCCTTCCCTCTTT-TTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37399 104 - 189199 TGGCTAAAAAA--ATGTAAAAACAAAAATCACTCTTCCCATACTACTCTTTTTCTCCTTCCCTCTTT-TTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120953937 104 + 123690457 TAGCTAAAAAA--GTGTAAACACAGAAATCACCCTTCCTGTACTACTCTTTTTCTCCTTCCCTCTTT-TTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484469 104 - 91754291 TGGCTTTAAAA--ATGTAAAAACAAAAATCACTCTTTTCGCACTACTCTTTTTCTCCTTCCCTCTTT-TTAAAATCTTGTTTTTGCTTTGGTTCACTGAC---AGCAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994539 100 - 74750902 ----TGAAGAA-AACGTAAAAAGCGAAATTACCCTTCCTGGACTACTCTTTCTCTCT-CCCCTCTTT-AAAAAACCCTGTTTTTGCTTTTGTTCACTGAC---AGCTGCC i calJac3.chr17 C 0 C 0 s saiBol1.JH378146 510948 100 + 17725628 ----TAAAAAA-AATGTAAAAACCGAAATTACTCTTCCTGGACTACTCTTTCTCTCC-TCCCTCTTTAAAAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAG-C i saiBol1.JH378146 C 0 C 0 s aotNan1.NW_018507959v1 46422 106 - 3732694 TGGCTAAAAAACGATGTAAAAACCGAAATTACCCTTCCTGGACTGCTCTTTCTCTCCTCCCCTCTTT-AAAAAATCCTGTTTTTGCTTTTGTTCCTTGAC---AGCAGCC i aotNan1.NW_018507959v1 I 24 C 0 s mm10.chr16 65487075 76 - 98207768 TAGTTAGCCAA------------------------------ACTGC-CTCTGCGTCTTTCCCTCTTT-TTATACTAC--TTCTTGCTTTGGTTCAGTGACCAAAGCAGCC i mm10.chr16 C 0 N 0 a score=499634.000000 s hg38.chr3_KI270779v1_alt 204625 202 + 205312 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttc---tttttg-tttttttgagacggagtctcactcttgtcactgaggctggagtgcagtggtgtgatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacccccagctaattt s panTro5.chr3 200190555 201 + 202621043 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttc---tttttg-tttttttgagacggagtctcactc-tgtcactgaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacccccggctaattt i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146627 201 + 190779 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttc---tttttg-tttttttgagacggagtctcactc-tgtcactgaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacccccggctaattt i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37503 197 - 189199 T-AAAAGTGTTCTTCCTCATATATGGGAGTTAAttc---tttttg-tttttttgagacggagtctcactc-tgtcactgaggctggagtgcagtggtgtgat---agctcactgcaacctccgccccccaggttcaagcgattctcctgcctcagccttctgagtagctgggattacaggcgtgtgccacctcccccggctaattt i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120954041 199 + 123690457 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttc---tttttg-tttttttgaaacggagtctcactc-tgtcacccaggctggagtgca-tggtgcgatctcaactcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgcccagccaa-tt i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484573 201 - 91754291 TAGCAAGAGTTCTTCCTCGTATACAAGGGTTAAttc---tttttgttttttttgagacggagtcttgctc-tgttgcccaggctggagtgcagtggcacaatctcagctcactgcaagctccgtctccctggttcacgccattctcctgcctcagcctcctgagtagctggggctacaggtgcccaccaccatgcctggctaa-tt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994639 202 - 74750902 T-AACAGTGTTCTGTTTCATATATGGAAGCCAAttc-tttttttt-tttctttgaggtggaatcctgctc-tgttgcccaggcttgagggcagtggcgtgatctccgttcacggaaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgacattataggcacccaccactacccccagctaattt i calJac3.chr17 C 0 I 13 s saiBol1.JH378146 511048 203 + 17725628 T-AACAGTGTTCTTTGTCATATATGGGAGCTAAtttattattttt-tttcttcgagacagagtcttgctc-tgttccccaggcttgagtgcagtggtgtgatctccgcttactgaaacctccacctcccaggttcaagtgattcacctgcctcagtcccctgagtagctgagattataggcatccaccactaccgccagctaattt i saiBol1.JH378146 C 0 I 13 s aotNan1.NW_018507959v1 46528 200 - 3732694 T-AACAGTGTTCTTTTTCATATATGGGAGCTAAttc---tttttt-tttctttgaggcggagtcttgctc-tgtcacccaggctggagtgcagtggtgcgatctccgctcactgaaacctccgcctcccaggttcaaatgattctcctgcctcagcctcccaagtagctgagattataggcacccaccactacccccagctaattt i aotNan1.NW_018507959v1 C 0 N 0 a score=81621.000000 s hg38.chr3_KI270779v1_alt 204827 50 + 205312 tttgtattttttgtagagacggggtttcaccacgttggccaggatggtct s panTro5.chr3 200190756 50 + 202621043 tttgtattttttgtagagacggggtttcaccacgttggccaggatggtct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146828 50 + 190779 tttgtattttttgtagagacggggtttcaccacgttggccaggatggtct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37700 50 - 189199 tttgtattttttgtagagacggggtttcaccacgttggccaggatggtct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120954240 50 + 123690457 tttgtattttctgtagagacggggtttcgccatgttggccaggatggtct i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484774 50 - 91754291 tttgtatttttagtagagacggggtttcaccatgttggccagaatgatct i chlSab2.chr15 C 0 N 0 s calJac3.chr17 994854 49 - 74750902 tttctatttttttt-gaaacagagtctagctctgttccctaggctgaagt i calJac3.chr17 I 13 C 0 s saiBol1.JH378146 511264 47 + 17725628 ttttaatttttttt-gaaac--agtctcgctctgttccccaggctggagt i saiBol1.JH378146 I 13 C 0 a score=318186.000000 s hg38.chr3_KI270779v1_alt 204877 246 + 205312 tgaactcctgatctcaaggctcactgcaacttctgcctcccgggttcaagggattctcctgcctcagccttctgagtagctgggagtacaggcctgtgccaccacgccaggcc-aatttttgta-ttttcagtagagacggggtttcaccatgttggccaggatggtctcaatctcttgacctca---tgatcctcccacctcggcctcccaaaatgctgggattaca-gcgtgagtcactgtgcccagcct s panTro5.chr3 200190806 246 + 202621043 tgaactcctgatctcaaggctccctgcaacttccgcctcccgggttcaagggattctcctgcctcagccttctgagtagctgggagtacaggcctgtgccaccatgcccggcc-AAtttttgta-ttttcagtagacacggggtttcaccatgttggccaggatggtctcaatctcttgacctca---tgatcctcccacctcggcctcccaaagtgctgggattaca-gcgtgagtcactgtgcccagcct i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 146878 246 + 190779 tgaactcctgatctcaaggctccctgcaacttccgcctcccgggttcaagggattctcctgcctcagccttctgagtagctgggagtacaggcctgtgccaccatgcccggcc-aatttttgta-ttttcagtagacacggggtttcaccatgttggccaggatggtctcaatctcttgacctcA---Tgatcctcccacctcggcctcccaaagtgctgggattaca-gcgtgagtcactgtgcccagcct i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37750 246 - 189199 tgaactcctgatctcaaggctcactgcaacttctgcctcccgggttcaagggattctcctgcctcagccttctgagtagctgggagtacaagcctgtgccaccatgcctgggc-aatttttgta-ttttcagtagagacggggtttcgccatgttggccaggatggtctcaatctcttgaccgca---tgatcctcccacctcggcctcccaaagtgctgggattaca-gcgtgagtcactgtgcccagcct i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120954290 216 + 123690457 caatctcttgacctca----------------------------------tgatcctcccacctcggcctcccaaaatgctgggattacaggcgtgagccaccgcacccagcctattttttgta-tttctggtagagacggagtttcaccgtctggtctggtctggtctgaaacttttgacctcaag-tgatccaccagcgttggcctcccaaaatgctgggattataggcgtgagccaccgcacccggccT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 994903 248 - 74750902 gcatggcacaatctca--gctcattgcaacctctgcctccctggttcaagcgattctc-ggcctcagcctcctgagtagctgggactacaggcatctgccactacaccccact-aatttttgtattttttagtagagatggggtttcaccattttagtcaggctggtctccaactcctggcctcaggttgatctgtctgcctcggcctccccaagtgctggggttacaggcgtgagccactgcacccggccT i calJac3.chr17 C 0 N 0 s saiBol1.JH378146 511311 249 + 17725628 gcatggcgcgatctca--gctcactgcaacctccgcctcccgggttcaagcgattctcgggcctcagcctcctaagtagctaggatcacaggcatccgccactacgccccact-aatttttgtattttttagtagagatggggtttcacccttttagtcaggctggtctcgaactcctgacctcaggttgatctgcctgcttcggcctccccaagtgctggggttacaggcatgagccactgcacccggccT i saiBol1.JH378146 C 0 N 0 a score=1332.000000 s hg38.chr3_KI270779v1_alt 205123 2 + 205312 aa s panTro5.chr3 200191052 2 + 202621043 aa i panTro5.chr3 C 0 C 0 s panPan2.chrUn_NW_014024201v1 147124 2 + 190779 aa i panPan2.chrUn_NW_014024201v1 C 0 C 0 s gorGor5.CYUI01000254v1 37996 2 - 189199 aa i gorGor5.CYUI01000254v1 C 0 C 0 s nomLeu3.chr11 120954506 2 + 123690457 GA i nomLeu3.chr11 C 0 N 0 a score=106228.000000 s hg38.chr3_KI270779v1_alt 205125 187 + 205312 tttttgtatttctggtagagatggggtttcaccgtctggtctggtctgaaactcctgacctcaagtgatccaccggcattggcctcccacaatgctgggattacaggcgtgagccaccgtgcccggccTGACGCGGTGAAAGTCTGAAGATTCTACATCTACTCCTTCAAATTTACTTCTAGGAATT s panTro5.chr3 200191054 187 + 202621043 tttttgtatttctggtagagatggggtttcaccgtctggtctggtctgaaactcctgacctcaagtgatccaccggcattggcctcccacaatgctgggattacaggcgtgagccaccgtgcccggccTGACGCGGTGAAAGTCTGAAGATTCTACATCTACTCCTTCaaatttacttctaggaatt i panTro5.chr3 C 0 N 0 s panPan2.chrUn_NW_014024201v1 147126 186 + 190779 -ttttgtatttctggtagagatggggtttcaccgtctggtctggtctgaaactcctgacctcaagtgatccaccggcattggcctcccacaatgctgggattacaggcgtgagccaccgtgcccggccTGACGCAGTGAAAGTCTGAAGATTCTACATCTACTCCTTCaaatttacttctaggaatt i panPan2.chrUn_NW_014024201v1 C 0 N 0 s gorGor5.CYUI01000254v1 37998 187 - 189199 tttttgtatttctggtagagatggggtttcaccgtctggtctggtctgaaactcctgacctcaagtgatccaccggcattggcctcccacaatgctgggattacaggcgtgagccaccgtgcccggccTGACGCAGTGAAAGTCTGAAGATTCTACATCTACTCCTTCAAATTTACTTCTAGGAATT i gorGor5.CYUI01000254v1 C 0 N 0